Query 022712
Match_columns 293
No_of_seqs 283 out of 1983
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 05:36:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022712.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022712hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02947 oxidoreductase 100.0 9.6E-70 2.1E-74 507.5 24.5 269 23-292 25-301 (374)
2 PLN02904 oxidoreductase 100.0 7.9E-69 1.7E-73 499.2 26.8 272 16-293 6-285 (357)
3 PLN02216 protein SRG1 100.0 9.5E-69 2.1E-73 499.0 26.3 262 24-292 15-287 (357)
4 PLN02758 oxidoreductase, 2OG-F 100.0 1.4E-68 3.1E-73 498.5 25.1 264 23-293 14-290 (361)
5 PLN02912 oxidoreductase, 2OG-F 100.0 1.8E-67 3.9E-72 488.9 26.3 264 23-292 5-273 (348)
6 PLN02254 gibberellin 3-beta-di 100.0 9.4E-67 2E-71 485.1 25.3 255 30-292 23-287 (358)
7 PLN02639 oxidoreductase, 2OG-F 100.0 2E-66 4.4E-71 480.7 26.3 258 27-292 3-267 (337)
8 PLN03178 leucoanthocyanidin di 100.0 1.9E-66 4.2E-71 484.5 25.6 263 25-293 7-288 (360)
9 PLN02393 leucoanthocyanidin di 100.0 1.1E-65 2.3E-70 479.6 25.4 267 22-292 11-290 (362)
10 PLN02515 naringenin,2-oxogluta 100.0 1.4E-65 3E-70 477.3 25.1 254 32-292 10-273 (358)
11 PLN02276 gibberellin 20-oxidas 100.0 2E-65 4.4E-70 477.6 25.6 250 35-293 18-283 (361)
12 PLN02704 flavonol synthase 100.0 4.5E-65 9.7E-70 471.3 26.0 261 25-293 5-276 (335)
13 PLN00417 oxidoreductase, 2OG-F 100.0 8.5E-65 1.8E-69 471.0 27.4 264 25-293 8-281 (348)
14 KOG0143 Iron/ascorbate family 100.0 1.2E-64 2.7E-69 464.1 24.3 231 61-293 14-255 (322)
15 PLN02750 oxidoreductase, 2OG-F 100.0 4.3E-64 9.4E-69 466.4 26.3 249 35-292 2-271 (345)
16 PLN02997 flavonol synthase 100.0 9.1E-62 2E-66 446.6 25.1 223 62-292 30-259 (325)
17 PTZ00273 oxidase reductase; Pr 100.0 1.2E-61 2.7E-66 446.3 24.2 231 62-293 3-256 (320)
18 PLN02299 1-aminocyclopropane-1 100.0 5.6E-61 1.2E-65 440.9 23.6 225 62-293 4-236 (321)
19 COG3491 PcbC Isopenicillin N s 100.0 7.9E-61 1.7E-65 422.8 22.6 228 62-292 3-251 (322)
20 PLN03002 oxidoreductase, 2OG-F 100.0 1.9E-60 4.2E-65 439.7 25.0 228 62-293 12-265 (332)
21 PLN02485 oxidoreductase 100.0 5.2E-60 1.1E-64 437.0 24.4 229 63-293 6-267 (329)
22 PLN02984 oxidoreductase, 2OG-F 100.0 5.7E-60 1.2E-64 436.8 23.3 226 62-293 36-277 (341)
23 PLN02403 aminocyclopropanecarb 100.0 2.2E-59 4.8E-64 426.7 23.6 222 64-293 2-232 (303)
24 PLN02156 gibberellin 2-beta-di 100.0 5.1E-59 1.1E-63 429.5 23.5 220 63-292 25-257 (335)
25 PLN02365 2-oxoglutarate-depend 100.0 9.9E-58 2.1E-62 416.4 23.4 217 62-293 3-229 (300)
26 PLN03001 oxidoreductase, 2OG-F 100.0 4.1E-48 8.8E-53 345.9 17.7 184 109-293 1-193 (262)
27 PLN03176 flavanone-3-hydroxyla 99.9 1.2E-23 2.5E-28 166.6 11.4 110 25-142 5-117 (120)
28 PF14226 DIOX_N: non-haem diox 99.9 9.6E-24 2.1E-28 166.3 8.6 95 65-161 1-96 (116)
29 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.8 3.1E-19 6.7E-24 136.4 6.8 75 216-293 2-78 (98)
30 smart00702 P4Hc Prolyl 4-hydro 87.9 3 6.5E-05 34.7 7.9 79 188-277 60-152 (178)
31 PF13640 2OG-FeII_Oxy_3: 2OG-F 86.2 0.52 1.1E-05 35.2 2.0 55 218-278 1-76 (100)
32 PF07350 DUF1479: Protein of u 76.7 2.4 5.2E-05 40.5 3.2 54 62-118 47-100 (416)
33 PRK08130 putative aldolase; Va 71.9 4.9 0.00011 34.8 3.7 37 64-102 127-163 (213)
34 PRK08333 L-fuculose phosphate 71.2 5 0.00011 33.8 3.6 37 64-102 120-156 (184)
35 PRK15401 alpha-ketoglutarate-d 70.6 35 0.00076 29.7 8.7 63 217-288 117-190 (213)
36 PRK05467 Fe(II)-dependent oxyg 69.6 26 0.00056 30.8 7.7 30 252-281 129-158 (226)
37 PRK05874 L-fuculose-phosphate 60.7 9.6 0.00021 33.2 3.4 37 64-102 127-163 (217)
38 PRK08660 L-fuculose phosphate 56.6 15 0.00033 30.8 3.8 35 64-101 115-149 (181)
39 PF13532 2OG-FeII_Oxy_2: 2OG-F 54.3 33 0.00071 28.6 5.6 64 217-288 98-171 (194)
40 PF00596 Aldolase_II: Class II 53.4 7.5 0.00016 32.5 1.4 37 63-101 122-159 (184)
41 PRK06833 L-fuculose phosphate 52.4 16 0.00034 31.6 3.3 37 64-102 124-160 (214)
42 PRK08087 L-fuculose phosphate 52.3 17 0.00037 31.4 3.5 37 64-102 122-158 (215)
43 PRK03634 rhamnulose-1-phosphat 48.9 19 0.00041 32.5 3.4 37 64-102 179-215 (274)
44 PLN00052 prolyl 4-hydroxylase; 48.0 84 0.0018 29.0 7.5 17 99-115 60-77 (310)
45 TIGR02409 carnitine_bodg gamma 47.8 28 0.00061 32.6 4.5 52 62-117 107-158 (366)
46 PF06820 Phage_fiber_C: Putati 46.4 14 0.00029 25.1 1.5 36 233-268 16-62 (64)
47 PRK06755 hypothetical protein; 46.3 20 0.00042 31.1 2.9 37 64-102 136-172 (209)
48 TIGR01086 fucA L-fuculose phos 46.1 23 0.0005 30.6 3.4 36 64-101 121-156 (214)
49 PRK06557 L-ribulose-5-phosphat 44.3 20 0.00044 31.1 2.7 37 64-102 130-168 (221)
50 PRK05834 hypothetical protein; 43.9 26 0.00057 29.9 3.3 38 64-101 121-160 (194)
51 TIGR00568 alkb DNA alkylation 43.9 93 0.002 25.9 6.6 57 216-280 95-162 (169)
52 PRK06357 hypothetical protein; 43.6 33 0.00073 29.7 4.0 37 64-102 130-172 (216)
53 TIGR02624 rhamnu_1P_ald rhamnu 42.5 25 0.00054 31.7 3.1 37 64-102 177-213 (270)
54 TIGR03328 salvage_mtnB methylt 41.3 33 0.00073 29.0 3.6 36 64-102 126-164 (193)
55 PRK06661 hypothetical protein; 40.6 27 0.00058 30.6 3.0 38 65-102 124-161 (231)
56 PF01471 PG_binding_1: Putativ 38.6 35 0.00075 22.4 2.6 42 79-120 3-44 (57)
57 PRK06754 mtnB methylthioribulo 36.8 34 0.00074 29.4 2.9 34 64-101 137-172 (208)
58 PF03460 NIR_SIR_ferr: Nitrite 36.5 48 0.001 22.7 3.2 38 78-115 23-68 (69)
59 cd00398 Aldolase_II Class II A 36.4 26 0.00056 30.1 2.1 40 63-102 121-160 (209)
60 PF02678 Pirin: Pirin; InterP 35.2 45 0.00098 25.6 3.1 34 216-249 19-58 (107)
61 cd00379 Ribosomal_L10_P0 Ribos 34.5 1.4E+02 0.0029 24.0 6.1 39 77-115 3-42 (155)
62 COG1402 Uncharacterized protei 33.1 1.4E+02 0.003 26.7 6.2 41 78-118 89-132 (250)
63 PRK07490 hypothetical protein; 32.2 44 0.00095 29.6 3.0 36 65-102 134-170 (245)
64 PF03668 ATP_bind_2: P-loop AT 30.4 68 0.0015 29.2 3.8 29 84-114 17-45 (284)
65 TIGR02410 carnitine_TMLD trime 29.9 76 0.0016 29.8 4.3 52 64-118 100-151 (362)
66 cd05796 Ribosomal_P0_like Ribo 29.5 1.3E+02 0.0028 24.8 5.2 39 77-115 3-42 (163)
67 COG2140 Thermophilic glucose-6 29.2 1.3E+02 0.0027 26.2 5.1 58 218-280 92-152 (209)
68 cd05795 Ribosomal_P0_L10e Ribo 26.2 1.8E+02 0.0039 24.2 5.6 39 77-115 3-42 (175)
69 PF11243 DUF3045: Protein of u 26.0 62 0.0013 23.4 2.2 21 82-102 36-56 (89)
70 PRK09220 methylthioribulose-1- 25.2 92 0.002 26.6 3.7 35 64-101 134-171 (204)
71 PF01361 Tautomerase: Tautomer 25.0 97 0.0021 20.4 3.1 24 183-206 14-37 (60)
72 PRK01964 4-oxalocrotonate taut 24.2 1E+02 0.0022 20.8 3.1 25 183-207 15-39 (64)
73 COG1741 Pirin-related protein 24.2 1E+02 0.0022 28.0 3.8 36 230-265 54-97 (276)
74 PRK09553 tauD taurine dioxygen 24.2 1.5E+02 0.0033 26.5 5.1 53 62-119 13-65 (277)
75 PF14549 P22_Cro: DNA-binding 24.1 46 0.001 22.7 1.3 11 280-290 40-50 (60)
76 PRK02220 4-oxalocrotonate taut 23.4 1.1E+02 0.0023 20.2 3.1 25 183-207 15-39 (61)
77 PRK04019 rplP0 acidic ribosoma 23.3 2E+02 0.0043 26.7 5.8 39 77-115 8-47 (330)
78 PF10055 DUF2292: Uncharacteri 22.8 61 0.0013 20.1 1.5 21 239-260 13-33 (38)
79 COG0244 RplJ Ribosomal protein 22.8 2.6E+02 0.0056 23.4 5.8 40 76-115 7-47 (175)
80 cd05797 Ribosomal_L10 Ribosoma 21.9 3E+02 0.0064 22.2 6.0 37 78-114 6-43 (157)
81 PRK00745 4-oxalocrotonate taut 21.7 1.3E+02 0.0028 19.9 3.2 25 183-207 15-39 (62)
82 PRK07044 aldolase II superfami 21.5 1E+02 0.0022 27.4 3.3 38 64-102 138-175 (252)
83 cd00491 4Oxalocrotonate_Tautom 21.2 1.1E+02 0.0024 19.8 2.7 24 183-206 14-37 (58)
84 PF08823 PG_binding_2: Putativ 21.1 1.4E+02 0.0031 21.2 3.4 34 78-111 15-48 (74)
85 PRK06486 hypothetical protein; 21.1 93 0.002 27.8 3.0 26 77-102 161-186 (262)
86 PF00466 Ribosomal_L10: Riboso 21.0 3.4E+02 0.0074 19.8 5.7 40 77-116 6-46 (100)
87 PF01268 FTHFS: Formate--tetra 20.9 95 0.0021 31.0 3.2 65 63-127 370-451 (557)
88 smart00460 TGc Transglutaminas 20.9 81 0.0018 21.0 2.1 16 255-270 53-68 (68)
89 PRK02289 4-oxalocrotonate taut 20.8 1.1E+02 0.0023 20.5 2.6 25 183-207 15-39 (60)
90 PF00046 Homeobox: Homeobox do 20.6 88 0.0019 20.3 2.1 38 174-211 11-48 (57)
91 COG3113 Predicted NTP binding 20.1 2E+02 0.0044 21.8 4.1 53 64-122 40-95 (99)
No 1
>PLN02947 oxidoreductase
Probab=100.00 E-value=9.6e-70 Score=507.52 Aligned_cols=269 Identities=39% Similarity=0.661 Sum_probs=229.3
Q ss_pred ccchHHHHhcCCCCCCCcccCCCCcccccccCCCCCCCCCCCcceEeCCCccc-chHHHHHHHHHHHHHcCeEEEEeCCC
Q 022712 23 KAGVKGLVDAGITKVPGIFICSSEELDRDRQNSNEPTRTHFRIPVVDLKEVRF-QRAEAVSGVLKAAEEVGFFQVINHGV 101 (293)
Q Consensus 23 ~~~v~~l~~~~~~~vP~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~-~~~~~~~~l~~A~~~~GFF~l~nHGi 101 (293)
..+||.|+++|+++||++||+|+++||.........+....+||||||+.+.+ .+..++++|++||++||||||+||||
T Consensus 25 ~~~v~~l~~~~~~~vp~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI 104 (374)
T PLN02947 25 QKGVKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRGSNRPHVLATLAAACREYGFFQVVNHGV 104 (374)
T ss_pred ecCHHHHHhcCCCcCCHHhcCCchhccccccccccccCCCCCCCeEECcccCCccHHHHHHHHHHHHHHCcEEEEEcCCC
Confidence 46899999999999999999999998730000000001345799999998853 56788999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccCccccccCCCCcccccccccCCC----CCCCCCCCchhhHH
Q 022712 102 ATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPE----PLDPQELPFVCRDI 177 (293)
Q Consensus 102 ~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~~~~~~~~~~~~~e~~~~~~~p~----~~~p~~~p~~fr~~ 177 (293)
|.++++++++.+++||+||.|+|+++.........||+..+....+...+|+|.+.+...|. +.||+ .|+.||++
T Consensus 105 p~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~gyg~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~WP~-~~~~fr~~ 183 (374)
T PLN02947 105 PSEVIGGMIDVARRFFELPLEERAKYMSADMRAPVRYGTSFNQNKDAVFCWRDFLKLVCHPLSDVLPHWPS-SPADLRKV 183 (374)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHhhhhcccCCCCeeeccccccccccccCceeceeeecCCcccccccCcc-chHHHHHH
Confidence 99999999999999999999999997654433456787554434456679999988765552 26996 46789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCC---hhhhhhhhcccccceeeeecCCCCCCCCcccccccccCCceEEEecCCCCC
Q 022712 178 TLEYSRQVHKLGTLLFELISEALGLK---PDYLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGG 254 (293)
Q Consensus 178 ~~~y~~~~~~l~~~ll~~la~~Lgl~---~~~~~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd~v~G 254 (293)
+++|+++|++|+.+||++|+++|||+ .++|.+.+....+.+|+||||||++|+.++|+++|||+|+||||+||+++|
T Consensus 184 ~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrln~YPp~p~~~~~~G~~~HTD~g~lTlL~Qd~v~G 263 (374)
T PLN02947 184 AATYAKATKRLFLELMEAILESLGIVKRGSDELLEEFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQDEVEG 263 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHhcCcceeeeeecCCCCCCcccccCCCCccCCCceEEEEecCCCC
Confidence 99999999999999999999999996 456766665566789999999999999999999999999999999999999
Q ss_pred cEEeeCCcEEEcCCCCCcEEEechhHHHHHhCCccccC
Q 022712 255 LQVFHQNQWIDVPPLSGAFVVNIGDLLQASLYWGISLT 292 (293)
Q Consensus 255 LQV~~~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT 292 (293)
|||+++|+|++|+|+||+|||||||+||+||||+||||
T Consensus 264 LQV~~~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~ 301 (374)
T PLN02947 264 LQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSV 301 (374)
T ss_pred eeEeECCEEEeCCCCCCeEEEEeCceeeeeeCCEEecc
Confidence 99999999999999999999999999999999999998
No 2
>PLN02904 oxidoreductase
Probab=100.00 E-value=7.9e-69 Score=499.21 Aligned_cols=272 Identities=31% Similarity=0.511 Sum_probs=231.2
Q ss_pred hhhhhhcccchHHHHhcCCCCCCCcccCCCCcccccccCCCCC-CCCCCCcceEeCCCccc--chHHHHHHHHHHHHHcC
Q 022712 16 LKAFDESKAGVKGLVDAGITKVPGIFICSSEELDRDRQNSNEP-TRTHFRIPVVDLKEVRF--QRAEAVSGVLKAAEEVG 92 (293)
Q Consensus 16 ~~~~~~~~~~v~~l~~~~~~~vP~~yv~p~~~~~~~~~~~~~~-~~~~~~iPvIDls~l~~--~~~~~~~~l~~A~~~~G 92 (293)
.+.|+++++||++|+++|.++||++|++|++++|. .... .....+||||||+.+.+ .+..++++|++||++||
T Consensus 6 ~~~~~~~~~~~~~l~~~~~~~vp~~~~~~~~~~p~----~~~~~~~~~~~iPvIDls~~~~~~~r~~~~~~l~~Ac~~~G 81 (357)
T PLN02904 6 KSVLDDSFTSAMTLTNSGVPHVPDRYVLPPSQRPM----LGSSIGTSTITLPVIDLSLLHDPLLRSCVIHEIEMACKGFG 81 (357)
T ss_pred cchhhccccchHHHHhcCCCCCCHHhCCCchhccc----ccccccccCCCCCEEECcccCCchhHHHHHHHHHHHHHHCc
Confidence 34578899999999999999999999999999873 1111 11235799999998753 45678999999999999
Q ss_pred eEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccCccccccCCCCcccccccccCCC----CCCCC
Q 022712 93 FFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPE----PLDPQ 168 (293)
Q Consensus 93 FF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~~~~~~~~~~~~~e~~~~~~~p~----~~~p~ 168 (293)
||||+||||+.++++++++++++||+||.|+|+++......+..||+.......+...+|+|.+.....|. +.||+
T Consensus 82 Ff~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~p~~~~~n~WP~ 161 (357)
T PLN02904 82 FFQVINHGIPSSVVKDALDAATRFFDLPVDEKMLLVSDNVHEPVRYGTSLNHSTDRVHYWRDFIKHYSHPLSKWINLWPS 161 (357)
T ss_pred eEEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHhhhcccCCCCcccccccccccCCCCCCceEEeeeccCCcccccccCcc
Confidence 99999999999999999999999999999999998643333345666443333345568998876544332 26996
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhcccccceeeeecCCCCCCCCcccccccccCCceEEEe
Q 022712 169 ELPFVCRDITLEYSRQVHKLGTLLFELISEALGLKPDYLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILL 248 (293)
Q Consensus 169 ~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~ 248 (293)
. |+.||+++++|+++|.+|+.+||++||++|||++++|.+.+....+.||+||||||+.++..+|+++|||+|+||||+
T Consensus 162 ~-~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YPp~p~~~~~~g~~~HtD~g~lTlL~ 240 (357)
T PLN02904 162 N-PPCYKEKVGKYAEATHVLHKQLIEAISESLGLEKNYLQEEIEEGSQVMAVNCYPACPEPEIALGMPPHSDFGSLTILL 240 (357)
T ss_pred c-chHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcccEEEeeecCCCCCcccccCCcCccCCCceEEEe
Confidence 4 567999999999999999999999999999999999998876666789999999999999999999999999999999
Q ss_pred cCCCCCcEEee-CCcEEEcCCCCCcEEEechhHHHHHhCCccccCC
Q 022712 249 QDHMGGLQVFH-QNQWIDVPPLSGAFVVNIGDLLQASLYWGISLTY 293 (293)
Q Consensus 249 qd~v~GLQV~~-~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT~ 293 (293)
|+ ++||||++ +|+|++|+|+||+|||||||+||+||||+||||.
T Consensus 241 qd-~~GLQV~~~~g~Wi~V~p~pgalVVNiGD~Le~~TNG~~kSt~ 285 (357)
T PLN02904 241 QS-SQGLQIMDCNKNWVCVPYIEGALIVQLGDQVEVMSNGIYKSVV 285 (357)
T ss_pred cC-CCeeeEEeCCCCEEECCCCCCeEEEEccHHHHHHhCCeeeccC
Confidence 97 58999987 5899999999999999999999999999999983
No 3
>PLN02216 protein SRG1
Probab=100.00 E-value=9.5e-69 Score=498.97 Aligned_cols=262 Identities=32% Similarity=0.556 Sum_probs=226.9
Q ss_pred cchHHHHhc-CCCCCCCcccCCCCcccccccCCCC-CCCCCCCcceEeCCCccc--chHHHHHHHHHHHHHcCeEEEEeC
Q 022712 24 AGVKGLVDA-GITKVPGIFICSSEELDRDRQNSNE-PTRTHFRIPVVDLKEVRF--QRAEAVSGVLKAAEEVGFFQVINH 99 (293)
Q Consensus 24 ~~v~~l~~~-~~~~vP~~yv~p~~~~~~~~~~~~~-~~~~~~~iPvIDls~l~~--~~~~~~~~l~~A~~~~GFF~l~nH 99 (293)
..||.|+.+ ++++||++||+|++++|. .. .+....+||||||+.+.+ .+..++++|++||++||||||+||
T Consensus 15 ~~~~~~~~~~~~~~~p~~~v~p~~~~~~-----~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nH 89 (357)
T PLN02216 15 PSVQEMVKEKMITTVPPRYVRSDQDKTE-----IAVDSGLSSEIPIIDMKRLCSSTAMDSEVEKLDFACKEWGFFQLVNH 89 (357)
T ss_pred hhHHHHHhcCCCCCCCHhhCcCcccCCc-----cccccCcCCCCCeEEChhccCCccHHHHHHHHHHHHHHCcEEEEECC
Confidence 459999886 889999999999999872 11 111225799999998853 345789999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccCccccccCCCCcccccccccCCC-----CCCCCCCCchh
Q 022712 100 GVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPE-----PLDPQELPFVC 174 (293)
Q Consensus 100 Gi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~~~~~~~~~~~~~e~~~~~~~p~-----~~~p~~~p~~f 174 (293)
||+.++++++++++++||+||.|+|+++... +....||+........+..+|+|.|.+...|. +.||+ .|+.|
T Consensus 90 GI~~~li~~~~~~~~~FF~LP~eeK~k~~~~-~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~WP~-~p~~f 167 (357)
T PLN02216 90 GIDSSFLDKVKSEIQDFFNLPMEEKKKLWQR-PGEIEGFGQAFVVSEDQKLDWADMFFLTMQPVRLRKPHLFPK-LPLPF 167 (357)
T ss_pred CCCHHHHHHHHHHHHHHHcCCHHHHHhhhcC-CCCccccCccccccccccCCceeeeeeeccCcccccchhccc-chHHH
Confidence 9999999999999999999999999998643 34457887654433456679999998765442 26996 57789
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhcc-cccceeeeecCCCCCCCCcccccccccCCceEEEec-CCC
Q 022712 175 RDITLEYSRQVHKLGTLLFELISEALGLKPDYLLNMECA-KGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQ-DHM 252 (293)
Q Consensus 175 r~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~-~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~q-d~v 252 (293)
|+++++|+++|.+|+.+||++|+++|||++++|.+.+.. ..+.||+||||||++++.++|+++|||+|+||||+| +++
T Consensus 168 r~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~v 247 (357)
T PLN02216 168 RDTLETYSAEVKSIAKILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNEV 247 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCchheeEEeecCCCCCcccccCccCcccCceEEEEEecCCC
Confidence 999999999999999999999999999999999987765 346899999999999999999999999999999999 579
Q ss_pred CCcEEeeCCcEEEcCCCCCcEEEechhHHHHHhCCccccC
Q 022712 253 GGLQVFHQNQWIDVPPLSGAFVVNIGDLLQASLYWGISLT 292 (293)
Q Consensus 253 ~GLQV~~~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT 292 (293)
+||||+++|+|++|+|+||+|||||||+||+||||+||||
T Consensus 248 ~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~ 287 (357)
T PLN02216 248 EGLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSI 287 (357)
T ss_pred CceeEEECCEEEECCCCCCeEEEEcchhhHhhcCCeeecc
Confidence 9999999999999999999999999999999999999998
No 4
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.4e-68 Score=498.46 Aligned_cols=264 Identities=32% Similarity=0.474 Sum_probs=229.9
Q ss_pred ccchHHHHhcCCCCCCCcccCCCCcccccccCCCC--CCCCCCCcceEeCCCccc----chHHHHHHHHHHHHHcCeEEE
Q 022712 23 KAGVKGLVDAGITKVPGIFICSSEELDRDRQNSNE--PTRTHFRIPVVDLKEVRF----QRAEAVSGVLKAAEEVGFFQV 96 (293)
Q Consensus 23 ~~~v~~l~~~~~~~vP~~yv~p~~~~~~~~~~~~~--~~~~~~~iPvIDls~l~~----~~~~~~~~l~~A~~~~GFF~l 96 (293)
..+||.|++++.++||++|++|+++||. .. ......+||||||+.+.+ .+..++++|++||++||||||
T Consensus 14 ~~~~~~l~~~~~~~vp~~~v~~~~~~p~-----~~~~~~~~~~~IPvIDl~~l~~~~~~~~~~~~~~l~~Ac~~~GFF~v 88 (361)
T PLN02758 14 IDDVQELRKSKPTTVPERFIRDMDERPD-----LASDTLHAPDDIPVIDFSRLVKGDNDELFSEILKLRLACEEWGFFQV 88 (361)
T ss_pred cccHHHHHhcCCCCCCHHHcCCchhccc-----cccccccCCCCCCeEEchhhcCCChHHHHHHHHHHHHHHHhCeEEEE
Confidence 3469999999999999999999999873 11 112345799999998753 235578999999999999999
Q ss_pred EeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccCccccccCCCCcccccccccCCC-----CCCCCCCC
Q 022712 97 INHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPE-----PLDPQELP 171 (293)
Q Consensus 97 ~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~~~~~~~~~~~~~e~~~~~~~p~-----~~~p~~~p 171 (293)
+||||+.++++++++++++||+||.|+|+++.. .+...+||+..+........+|+|.|.+...|. +.||+. |
T Consensus 89 ~nHGi~~~l~~~~~~~~~~FF~LP~eeK~k~~~-~~~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~WP~~-~ 166 (361)
T PLN02758 89 INHGIELELLEEIEKVAREFFMLPLEEKQKYPM-APGTVQGYGQAFVFSEDQKLDWCNMFALGVEPHFIRNPKLWPTK-P 166 (361)
T ss_pred ecCCCCHHHHHHHHHHHHHHhcCCHHHHHHhcc-cCCCccccCcccccccccccCeeEEEEeeccCccccccccCccc-c
Confidence 999999999999999999999999999999764 334567997654443456679999998876552 269964 6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhcccccceeeeecCCCCCCCCcccccccccCCceEEEecCC
Q 022712 172 FVCRDITLEYSRQVHKLGTLLFELISEALGLKPDYLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDH 251 (293)
Q Consensus 172 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd~ 251 (293)
+.||+.+++|+++|.+|+.+||++|+++|||++++|.+.+....+.||+||||+|++++..+|+++|||+|+||||+||+
T Consensus 167 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lR~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~ 246 (361)
T PLN02758 167 ARFSETLEVYSREIRELCQRLLKYIAMTLGLKEDRFEEMFGEAVQAVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQGK 246 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhHHHhcCccceeeeecCCCCCCcccccCccCccCCceeEEEEeCC
Confidence 67999999999999999999999999999999999998877777889999999999999999999999999999999985
Q ss_pred --CCCcEEeeCCcEEEcCCCCCcEEEechhHHHHHhCCccccCC
Q 022712 252 --MGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQASLYWGISLTY 293 (293)
Q Consensus 252 --v~GLQV~~~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT~ 293 (293)
++||||+++|+|++|+|+||++|||+||+||+||||+||||.
T Consensus 247 ~~v~GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~SNG~~kS~~ 290 (361)
T PLN02758 247 GSCVGLQILKDNTWVPVHPVPNALVINIGDTLEVLTNGKYKSVE 290 (361)
T ss_pred CCCCCeeeeeCCEEEeCCCCCCeEEEEccchhhhhcCCeeeccc
Confidence 899999999999999999999999999999999999999984
No 5
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.8e-67 Score=488.89 Aligned_cols=264 Identities=33% Similarity=0.562 Sum_probs=225.3
Q ss_pred ccchHHHHhcCCCCCCCcccCCCCcccccccCCCCCCCCCCCcceEeCCCccc-chHHHHHHHHHHHHHcCeEEEEeCCC
Q 022712 23 KAGVKGLVDAGITKVPGIFICSSEELDRDRQNSNEPTRTHFRIPVVDLKEVRF-QRAEAVSGVLKAAEEVGFFQVINHGV 101 (293)
Q Consensus 23 ~~~v~~l~~~~~~~vP~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~-~~~~~~~~l~~A~~~~GFF~l~nHGi 101 (293)
+--||+|. +++..||++|++|.+++|. .........+||+|||+.+.+ .+.+++++|++||++||||||+||||
T Consensus 5 ~~~~~~~~-~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGI 79 (348)
T PLN02912 5 KLLVSDIA-SVVDHVPSNYVRPVSDRPN----MSEVETSGDSIPLIDLRDLHGPNRADIINQFAHACSSYGFFQIKNHGV 79 (348)
T ss_pred hhHHHHHh-cCCCCCCHHhcCCchhccc----cccccccCCCCCeEECcccCCcCHHHHHHHHHHHHHHCCEEEEEeCCC
Confidence 34689987 7899999999999988872 011112345799999998854 56678899999999999999999999
Q ss_pred CHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccCccccccCCCCcccccccccCCC----CCCCCCCCchhhHH
Q 022712 102 ATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPE----PLDPQELPFVCRDI 177 (293)
Q Consensus 102 ~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~~~~~~~~~~~~~e~~~~~~~p~----~~~p~~~p~~fr~~ 177 (293)
+.++++++++++++||+||.|+|++++...+....+|...+........+|+|.+.+...|. +.||+. |+.||++
T Consensus 80 ~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~n~wP~~-~~~fr~~ 158 (348)
T PLN02912 80 PEETIKKMMNVAREFFHQSESERVKHYSADTKKTTRLSTSFNVSKEKVSNWRDFLRLHCYPIEDFIEEWPST-PISFREV 158 (348)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHhHhhcCCCCcccccccccccccccCCchheEEEeecCcccccccCcch-hHHHHHH
Confidence 99999999999999999999999997654433333444333333345679999987654332 269964 6679999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhcccccceeeeecCCCCCCCCcccccccccCCceEEEecCCCCCcEE
Q 022712 178 TLEYSRQVHKLGTLLFELISEALGLKPDYLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQV 257 (293)
Q Consensus 178 ~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd~v~GLQV 257 (293)
+++|+++|.+|+.+||++|+++|||++++|.+.+....+.||+||||||+.++..+|+++|||+|+||||+||+++||||
T Consensus 159 ~~~y~~~~~~l~~~il~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YPp~~~~~~~~G~~~HtD~g~lTlL~Qd~v~GLQV 238 (348)
T PLN02912 159 TAEYATSVRALVLTLLEAISESLGLEKDRVSNTLGKHGQHMAINYYPPCPQPELTYGLPGHKDANLITVLLQDEVSGLQV 238 (348)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCccceeeeeecCCCCChhhcCCcCCCcCCCceEEEEECCCCceEE
Confidence 99999999999999999999999999999998776667789999999999998899999999999999999999999999
Q ss_pred eeCCcEEEcCCCCCcEEEechhHHHHHhCCccccC
Q 022712 258 FHQNQWIDVPPLSGAFVVNIGDLLQASLYWGISLT 292 (293)
Q Consensus 258 ~~~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT 292 (293)
+++|+|++|+|+||++||||||+||+||||+||||
T Consensus 239 ~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kSt 273 (348)
T PLN02912 239 FKDGKWIAVNPIPNTFIVNLGDQMQVISNDKYKSV 273 (348)
T ss_pred EECCcEEECCCcCCeEEEEcCHHHHHHhCCEEEcc
Confidence 99999999999999999999999999999999998
No 6
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=9.4e-67 Score=485.14 Aligned_cols=255 Identities=28% Similarity=0.432 Sum_probs=214.1
Q ss_pred HhcCCCCCCCcccCCCCcccccccCCCCCCCCCCCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHH
Q 022712 30 VDAGITKVPGIFICSSEELDRDRQNSNEPTRTHFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGM 109 (293)
Q Consensus 30 ~~~~~~~vP~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~ 109 (293)
+.++..+||++||+|+++|+... ..........+||||||+.. .++++|++||++||||||+||||+.++++++
T Consensus 23 ~~~~~~~vp~~~v~p~~~~~~~~-~~~~~~~~~~~iPvIDl~~~-----~~~~~l~~Ac~~~GFF~vvnHGI~~~l~~~~ 96 (358)
T PLN02254 23 DFTSLQTLPDSHVWTPKDDLLFS-SAPSPSTTDESIPVIDLSDP-----NALTLIGHACETWGVFQVTNHGIPLSLLDDI 96 (358)
T ss_pred chhhhccCChhhcCChhhccCcc-ccccccCcCCCCCeEeCCCH-----HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHH
Confidence 33445689999999999883100 00001122357999999753 4689999999999999999999999999999
Q ss_pred HHHHHHhhCCCHHHHhhhhccccCCccccccCccccccCCCCcccccccccCCC----CCCCCCCCchhhHHHHHHHHHH
Q 022712 110 LEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPE----PLDPQELPFVCRDITLEYSRQV 185 (293)
Q Consensus 110 ~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~~~~~~~~~~~~~e~~~~~~~p~----~~~p~~~p~~fr~~~~~y~~~~ 185 (293)
++++++||+||.|+|+++.. ......||+.........+.+|+|.|.+...|. +.||+. |+.||+++++|+++|
T Consensus 97 ~~~~~~FF~LP~EeK~k~~~-~~~~~~Gy~~~~~~~~~~~~~w~e~~~~~~~p~~~~~~~wP~~-~~~fr~~~~~Y~~~~ 174 (358)
T PLN02254 97 ESQTRRLFSLPAQRKLKAAR-SPDGVSGYGVARISSFFNKKMWSEGFTIMGSPLEHARQLWPQD-HTKFCDVMEEYQKEM 174 (358)
T ss_pred HHHHHHHHcCCHHHHHhhcc-CCCCcccccccccccccCCCCceeeEEeecCccccchhhCCCC-chHHHHHHHHHHHHH
Confidence 99999999999999999754 344567897654433345679999998765442 379964 567999999999999
Q ss_pred HHHHHHHHHHHHHHcCCChhhhhhhh-----cccccceeeeecCCCCCCCCcccccccccCCceEEEecCCCCCcEEeeC
Q 022712 186 HKLGTLLFELISEALGLKPDYLLNME-----CAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQ 260 (293)
Q Consensus 186 ~~l~~~ll~~la~~Lgl~~~~~~~~~-----~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd~v~GLQV~~~ 260 (293)
++|+.+||++|+++|||++++|.+.+ ....+.+|+||||||++++.++|+++|||+|+||||+||+++||||+++
T Consensus 175 ~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTiL~Qd~v~GLQV~~~ 254 (358)
T PLN02254 175 KKLAERLMWLMLGSLGITEEDIKWAGPKSGSQGAQAALQLNSYPVCPDPDRAMGLAPHTDSSLLTILYQSNTSGLQVFRE 254 (358)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHhhcccccCcceeEEEecCCCCCCcccccCcCCccCCCcEEEEecCCCCCceEECC
Confidence 99999999999999999999987654 3445789999999999999999999999999999999999999999987
Q ss_pred C-cEEEcCCCCCcEEEechhHHHHHhCCccccC
Q 022712 261 N-QWIDVPPLSGAFVVNIGDLLQASLYWGISLT 292 (293)
Q Consensus 261 g-~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT 292 (293)
| +|++|+|+||++||||||+||+||||+||||
T Consensus 255 ~~~Wi~V~p~pgalVVNiGD~lq~~SNg~~kS~ 287 (358)
T PLN02254 255 GVGWVTVPPVPGSLVVNVGDLLHILSNGRFPSV 287 (358)
T ss_pred CCEEEEcccCCCCEEEEhHHHHHHHhCCeeccc
Confidence 6 8999999999999999999999999999998
No 7
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2e-66 Score=480.65 Aligned_cols=258 Identities=41% Similarity=0.664 Sum_probs=221.7
Q ss_pred HHHHhcCC--CCCCCcccCCCCcccccccCCCCCCCCCCCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHH
Q 022712 27 KGLVDAGI--TKVPGIFICSSEELDRDRQNSNEPTRTHFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATE 104 (293)
Q Consensus 27 ~~l~~~~~--~~vP~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~ 104 (293)
+.|+++|+ .+||++||+|++++|. ........+||||||+.. .+..++++|.+||++||||||+||||+.+
T Consensus 3 ~~~~~~~~~~~~~p~~~~~~~~~~p~-----~~~~~~~~~iPvIDls~~--~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~ 75 (337)
T PLN02639 3 TKLLSTGIRHTTLPESYVRPESERPR-----LSEVSTCENVPVIDLGSP--DRAQVVQQIGDACRRYGFFQVINHGVSAE 75 (337)
T ss_pred hhhhhhcCCcCcCCHHhcCCchhccc-----ccccccCCCCCeEECCCc--cHHHHHHHHHHHHHhCCEEEEEcCCCCHH
Confidence 45888887 8999999999988872 111123467999999975 56789999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccCccccccCCCCcccccccccCCC----CCCCCCCCchhhHHHHH
Q 022712 105 VLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPE----PLDPQELPFVCRDITLE 180 (293)
Q Consensus 105 l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~~~~~~~~~~~~~e~~~~~~~p~----~~~p~~~p~~fr~~~~~ 180 (293)
+++++++.+++||+||.|+|+++....+....+|+..+....+...+|+|.+.+...|. +.||+. |+.||+.+++
T Consensus 76 l~~~~~~~~~~fF~LP~e~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~n~wP~~-~~~fr~~~~~ 154 (337)
T PLN02639 76 LVEKMLAVAHEFFRLPVEEKMKLYSDDPTKTMRLSTSFNVRKEKVHNWRDYLRLHCYPLDKYVPEWPSN-PPSFKEIVST 154 (337)
T ss_pred HHHHHHHHHHHHhcCCHHHHhhhhccCCCCccccccccccccCcccCchheEEeeecCCcccchhCccc-chHHHHHHHH
Confidence 99999999999999999999997654433333443333333345678999987755442 269964 6679999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCChhhhhhhhcccccceeeeecCCCCCCCCcccccccccCCceEEEecC-CCCCcEEee
Q 022712 181 YSRQVHKLGTLLFELISEALGLKPDYLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQD-HMGGLQVFH 259 (293)
Q Consensus 181 y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd-~v~GLQV~~ 259 (293)
|+++|.+|+.+||++||++|||++++|.+.+......+|+||||||++++..+|+++|||+|+||||+|| +++||||++
T Consensus 155 y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~ 234 (337)
T PLN02639 155 YCREVRELGFRLQEAISESLGLEKDYIKNVLGEQGQHMAVNYYPPCPEPELTYGLPAHTDPNALTILLQDQQVAGLQVLK 234 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhCCCccEEEEEcCCCCCCcccccCCCCCcCCCceEEEEecCCcCceEeec
Confidence 9999999999999999999999999999877777778999999999999889999999999999999998 499999999
Q ss_pred CCcEEEcCCCCCcEEEechhHHHHHhCCccccC
Q 022712 260 QNQWIDVPPLSGAFVVNIGDLLQASLYWGISLT 292 (293)
Q Consensus 260 ~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT 292 (293)
+|+|++|+|+||++|||+||+||+||||+||||
T Consensus 235 ~g~Wi~V~p~pg~lVVNiGD~L~~~TNG~~kSt 267 (337)
T PLN02639 235 DGKWVAVNPHPGAFVINIGDQLQALSNGRYKSV 267 (337)
T ss_pred CCeEEeccCCCCeEEEechhHHHHHhCCeeecc
Confidence 999999999999999999999999999999998
No 8
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=1.9e-66 Score=484.49 Aligned_cols=263 Identities=31% Similarity=0.502 Sum_probs=224.8
Q ss_pred chHHHHhcCCCCCCCcccCCCCcccccccCCCCC------CCCCCCcceEeCCCccc----chHHHHHHHHHHHHHcCeE
Q 022712 25 GVKGLVDAGITKVPGIFICSSEELDRDRQNSNEP------TRTHFRIPVVDLKEVRF----QRAEAVSGVLKAAEEVGFF 94 (293)
Q Consensus 25 ~v~~l~~~~~~~vP~~yv~p~~~~~~~~~~~~~~------~~~~~~iPvIDls~l~~----~~~~~~~~l~~A~~~~GFF 94 (293)
.||.|+++++.+||++|++|+++++. ... ......||||||+.+.+ .+..++++|++||++||||
T Consensus 7 ~~~~l~~~~~~~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF 81 (360)
T PLN03178 7 RVEALASSGVSSIPKEYIRPPEERPS-----IGDVFEEEKKAAGPQVPVVDLSNIESDDEVVREACVEAVRAAAAEWGVM 81 (360)
T ss_pred hHHHHHhcCCCCCCHHHcCCchhccc-----ccccccccccccCCCCCEEEchhhcCCChhhHHHHHHHHHHHHHHCCEE
Confidence 59999999999999999999998862 111 11345799999998853 3678899999999999999
Q ss_pred EEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhcccc-CCccccccCccccccCCCCcccccccccCCC-----CCCCC
Q 022712 95 QVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREV-NRKVKYGSNFDLYESSSANWRDTLFCVMGPE-----PLDPQ 168 (293)
Q Consensus 95 ~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~-~~~~gY~~~~~~~~~~~~~~~e~~~~~~~p~-----~~~p~ 168 (293)
||+||||+.++++++++++++||+||.|+|+++..... +...||+........+..+|+|.+.....|. +.||+
T Consensus 82 ~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~n~wP~ 161 (360)
T PLN03178 82 HLVGHGIPADLLDRVRKAGEAFFRLPIEEKEKYANDQARGAAQGYGSKLAANASGQLEWEDYFFHLTLPEDKRDPSLWPK 161 (360)
T ss_pred EEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCCCccccccccccccccccchhHhhccccCCccccccccCCC
Confidence 99999999999999999999999999999999764322 2356886543322345568999876543332 27997
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhcc---cccceeeeecCCCCCCCCcccccccccCCceE
Q 022712 169 ELPFVCRDITLEYSRQVHKLGTLLFELISEALGLKPDYLLNMECA---KGHCLLSNYYPACPQPELTMGTTKHSDPDFLT 245 (293)
Q Consensus 169 ~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~---~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lT 245 (293)
. ++.||+.+++|+++|.+|+.+||++||++|||++++|.+.+.. ..+.+|+||||+|+.++..+|+++|||+|+||
T Consensus 162 ~-~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lT 240 (360)
T PLN03178 162 T-PPDYVPATSEYSRSLRSLATKLLAILSLGLGLPEDRLEKEVGGLEELLLQMKINYYPRCPQPDLALGVEAHTDVSALT 240 (360)
T ss_pred C-chHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcccchhhhheeccCCCCCCccccCcCCccCCCceE
Confidence 5 4569999999999999999999999999999999999987653 34679999999999999999999999999999
Q ss_pred EEecCCCCCcEEeeCCcEEEcCCCCCcEEEechhHHHHHhCCccccCC
Q 022712 246 ILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQASLYWGISLTY 293 (293)
Q Consensus 246 lL~qd~v~GLQV~~~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT~ 293 (293)
||+||+++||||+++|+|++|+|+||++||||||+||+||||+||||.
T Consensus 241 lL~qd~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~L~~~TNG~~kSt~ 288 (360)
T PLN03178 241 FILHNMVPGLQVLYEGKWVTAKCVPDSIVVHIGDTLEILSNGRYKSIL 288 (360)
T ss_pred EEeeCCCCceeEeECCEEEEcCCCCCeEEEEccHHHHHHhCCcccccc
Confidence 999999999999999999999999999999999999999999999983
No 9
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=1.1e-65 Score=479.57 Aligned_cols=267 Identities=36% Similarity=0.600 Sum_probs=226.9
Q ss_pred cccchHHHHhcCCCCCCCcccCCCCcccccccCCCCCCCCCCCcceEeCCCccc----chHHHHHHHHHHHHHcCeEEEE
Q 022712 22 SKAGVKGLVDAGITKVPGIFICSSEELDRDRQNSNEPTRTHFRIPVVDLKEVRF----QRAEAVSGVLKAAEEVGFFQVI 97 (293)
Q Consensus 22 ~~~~v~~l~~~~~~~vP~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~----~~~~~~~~l~~A~~~~GFF~l~ 97 (293)
..+.||.|++.+.++||++||+|+++++... .........+||||||+.+.+ .+..++++|.+||++||||||+
T Consensus 11 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~iPvIDls~l~~~~~~~r~~~~~~l~~Ac~~~GFF~l~ 88 (362)
T PLN02393 11 PIVRVQSLSESGLPTIPDRYVKPPSQRPNSS--NTTSAPAEINIPVIDLSSLFSDDARLRDATLRAISEACREWGFFQVV 88 (362)
T ss_pred ccchHHHHHhcCCCcCCHHHcCCchhccccc--cccccCcCCCCCeEECccccCCChHHHHHHHHHHHHHHHHCcEEEEE
Confidence 3457999999899999999999999887300 001123446899999999853 3578999999999999999999
Q ss_pred eCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccCccccccCCCCcccccccccCCC-----CCCCCCCCc
Q 022712 98 NHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPE-----PLDPQELPF 172 (293)
Q Consensus 98 nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~~~~~~~~~~~~~e~~~~~~~p~-----~~~p~~~p~ 172 (293)
||||+.++++++++.+++||+||.|+|+++.. .+....||+...........+|+|.+.+...|. +.||+ .|+
T Consensus 89 nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~-~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~~~~~~~~n~wP~-~~~ 166 (362)
T PLN02393 89 NHGVRPELMDRAREAWREFFHLPLEVKQRYAN-SPATYEGYGSRLGVEKGAILDWSDYYFLHYLPSSLKDPNKWPS-LPP 166 (362)
T ss_pred eCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhc-ccCcccccccccccccccccCchhheeeeecCccccchhhCcc-cch
Confidence 99999999999999999999999999999763 334467886443333345679999987654331 26996 567
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhccc---ccceeeeecCCCCCCCCcccccccccCCceEEEec
Q 022712 173 VCRDITLEYSRQVHKLGTLLFELISEALGLKPDYLLNMECAK---GHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQ 249 (293)
Q Consensus 173 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~---~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~q 249 (293)
.||+++++|+++|.+|+.+||++|+++||+++++|.+.+... ...+|+||||+|++++..+|+++|||+|+||||+|
T Consensus 167 ~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lRl~~YP~~p~~~~~~g~~~HtD~g~lTlL~q 246 (362)
T PLN02393 167 SCRELIEEYGEEVVKLCGRLMKVLSVNLGLEEDRLQNAFGGEDGVGACLRVNYYPKCPQPDLTLGLSPHSDPGGMTILLP 246 (362)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhCCCccccceeeeeecCCCCCcccccccccccCCceEEEEee
Confidence 799999999999999999999999999999999999876542 36899999999999988999999999999999998
Q ss_pred C-CCCCcEEeeCCcEEEcCCCCCcEEEechhHHHHHhCCccccC
Q 022712 250 D-HMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQASLYWGISLT 292 (293)
Q Consensus 250 d-~v~GLQV~~~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT 292 (293)
+ +++||||+++|+|++|+|+||++|||+||+||+||||++|||
T Consensus 247 ~~~v~GLQV~~~g~W~~V~p~pgalVVNiGD~l~~~Tng~~kSt 290 (362)
T PLN02393 247 DDNVAGLQVRRDDAWITVKPVPDAFIVNIGDQIQVLSNAIYKSV 290 (362)
T ss_pred CCCCCcceeeECCEEEECCCCCCeEEEEcchhhHhhcCCeeecc
Confidence 4 699999999999999999999999999999999999999998
No 10
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=1.4e-65 Score=477.29 Aligned_cols=254 Identities=33% Similarity=0.539 Sum_probs=216.5
Q ss_pred cCCCCCCCcccCCCCcccccccCCCCCCCCCCCcceEeCCCccc---chHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHH
Q 022712 32 AGITKVPGIFICSSEELDRDRQNSNEPTRTHFRIPVVDLKEVRF---QRAEAVSGVLKAAEEVGFFQVINHGVATEVLVG 108 (293)
Q Consensus 32 ~~~~~vP~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~---~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~ 108 (293)
++..+||.+|++|++++|. ....+...+||||||+.+.+ .+..++++|.+||++||||||+||||+.+++++
T Consensus 10 ~~~~~~p~~~~~~~~~~~~-----~~~~~~~~~iPvIDls~~~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~ 84 (358)
T PLN02515 10 AGESTLQSSFVRDEDERPK-----VAYNQFSDEIPVISLAGIDEVGGRRGEICRKIVEACEDWGIFQVVDHGVDANLVAD 84 (358)
T ss_pred cCCCcCCHHhcCCchhccC-----ccccccCCCCCEEEChhccCCchHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHH
Confidence 3567999999999988873 11123345799999998742 467789999999999999999999999999999
Q ss_pred HHHHHHHhhCCCHHHHhhhhccccCCccccccCccccccCCCCcccccccccCCC-----CCCCCCCCchhhHHHHHHHH
Q 022712 109 MLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPE-----PLDPQELPFVCRDITLEYSR 183 (293)
Q Consensus 109 ~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~~~~~~~~~~~~~e~~~~~~~p~-----~~~p~~~p~~fr~~~~~y~~ 183 (293)
+++++++||+||.|+|+++.... ....||............||+|.|.+...|. +.||+. |+.||+++++|++
T Consensus 85 ~~~~~~~FF~LP~eeK~k~~~~~-~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~~~~~~~~n~WP~~-~~~fr~~~~~y~~ 162 (358)
T PLN02515 85 MTRLARDFFALPAEEKLRFDMSG-GKKGGFIVSSHLQGEAVQDWREIVTYFSYPVRTRDYSRWPDK-PEGWRAVTEEYSE 162 (358)
T ss_pred HHHHHHHHhcCCHHHHhhhCcCC-CCccCcccccccccccccCceeeeccccCccccccccccccc-chHHHHHHHHHHH
Confidence 99999999999999999975433 3346885333222344679999986643331 279965 5579999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhhhhhhcccccceeeeecCCCCCCCCcccccccccCCceEEEecCCCCCcEEeeCC--
Q 022712 184 QVHKLGTLLFELISEALGLKPDYLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQN-- 261 (293)
Q Consensus 184 ~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd~v~GLQV~~~g-- 261 (293)
+|.+|+.+||++|+++||+++++|.+.+....+.+|+||||+|+.++..+|+++|||+|+||||+||+++||||++++
T Consensus 163 ~~~~L~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~~~~~ 242 (358)
T PLN02515 163 KLMGLACKLLEVLSEAMGLEKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGK 242 (358)
T ss_pred HHHHHHHHHHHHHHHhcCCChhhHHHhhcCccceEEEeecCCCCChhhccCCCCCCCCCeEEEEecCCCCceEEEECCCC
Confidence 999999999999999999999999988766667899999999999999999999999999999999999999998764
Q ss_pred cEEEcCCCCCcEEEechhHHHHHhCCccccC
Q 022712 262 QWIDVPPLSGAFVVNIGDLLQASLYWGISLT 292 (293)
Q Consensus 262 ~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT 292 (293)
+|++|+|+||+|||||||+||+||||+||||
T Consensus 243 ~Wi~Vpp~pgalVVNiGD~L~~~TNG~~kSt 273 (358)
T PLN02515 243 TWITVQPVEGAFVVNLGDHGHYLSNGRFKNA 273 (358)
T ss_pred eEEECCCCCCeEEEEccHHHHHHhCCeeeee
Confidence 6999999999999999999999999999998
No 11
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=2e-65 Score=477.57 Aligned_cols=250 Identities=32% Similarity=0.492 Sum_probs=215.7
Q ss_pred CCCCCcccCCCCcccccccCCCCCCCCCCCcceEeCCCccc----chHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHH
Q 022712 35 TKVPGIFICSSEELDRDRQNSNEPTRTHFRIPVVDLKEVRF----QRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGML 110 (293)
Q Consensus 35 ~~vP~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~----~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~ 110 (293)
.+||+.|++|.+++|. . .....+||||||+.+.+ .+..++++|++||++||||||+||||+.+++++++
T Consensus 18 ~~vp~~~~~~~~~~p~-----~--~~~~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~ 90 (361)
T PLN02276 18 SNIPAQFIWPDEEKPS-----A--AVPELAVPLIDLGGFLSGDEAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAH 90 (361)
T ss_pred CCCCHHhcCCccccCC-----C--CCcCCCCCeEEChhhcCCChHHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHH
Confidence 4799999999998872 1 12235799999998742 35678999999999999999999999999999999
Q ss_pred HHHHHhhCCCHHHHhhhhccccCCccccccCccccccCCCCcccccccccCCC------------CCCCCCCCchhhHHH
Q 022712 111 EAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPE------------PLDPQELPFVCRDIT 178 (293)
Q Consensus 111 ~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~~~~~~~~~~~~~e~~~~~~~p~------------~~~p~~~p~~fr~~~ 178 (293)
+++++||+||.|+|+++.. .+...+||............||+|.|.+...+. +.||.+. +.||+++
T Consensus 91 ~~~~~FF~LP~eeK~k~~~-~~~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~fr~~~ 168 (361)
T PLN02276 91 EYMDAFFKLPLSEKQRAQR-KPGESCGYASSHTGRFSSKLPWKETLSFGYHADGGSSPVVVDYFKSVLGEDF-EQFGKVY 168 (361)
T ss_pred HHHHHHHcCCHHHHHhhcc-CCCCccccCccCccccCCCCCeeeeEEEeccCcccccccchhcccccCCcch-HHHHHHH
Confidence 9999999999999999754 344567997654433345579999998864331 1244322 3589999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhcccccceeeeecCCCCCCCCcccccccccCCceEEEecCCCCCcEEe
Q 022712 179 LEYSRQVHKLGTLLFELISEALGLKPDYLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVF 258 (293)
Q Consensus 179 ~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd~v~GLQV~ 258 (293)
++|+.+|.+|+.+||++||++|||++++|.+.+....+.+|+||||||+.++..+|+++|||+|+||||+||+++||||+
T Consensus 169 ~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~ 248 (361)
T PLN02276 169 QEYCEAMKTLSLKIMELLGISLGVDRGYYRKFFEDGDSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQDQVGGLQVF 248 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCccceeeeEeCCCCCCcccccCCccccCCceeEEEEecCCCceEEE
Confidence 99999999999999999999999999999988877778899999999999999999999999999999999999999999
Q ss_pred eCCcEEEcCCCCCcEEEechhHHHHHhCCccccCC
Q 022712 259 HQNQWIDVPPLSGAFVVNIGDLLQASLYWGISLTY 293 (293)
Q Consensus 259 ~~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT~ 293 (293)
++|+|++|+|+||++||||||+||+||||++|||.
T Consensus 249 ~~g~Wi~V~p~pgalVVNiGD~L~~~TNG~~kSt~ 283 (361)
T PLN02276 249 VDNKWRSVRPRPGALVVNIGDTFMALSNGRYKSCL 283 (361)
T ss_pred ECCEEEEcCCCCCeEEEEcHHHHHHHhCCcccccc
Confidence 99999999999999999999999999999999983
No 12
>PLN02704 flavonol synthase
Probab=100.00 E-value=4.5e-65 Score=471.30 Aligned_cols=261 Identities=29% Similarity=0.515 Sum_probs=221.7
Q ss_pred chHHHHhcC--CCCCCCcccCCCCcccccccCCCCC-CCCCCCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCC
Q 022712 25 GVKGLVDAG--ITKVPGIFICSSEELDRDRQNSNEP-TRTHFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGV 101 (293)
Q Consensus 25 ~v~~l~~~~--~~~vP~~yv~p~~~~~~~~~~~~~~-~~~~~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi 101 (293)
+||.+++++ ..+||++|++|++++|. ... .....+||||||+.. .+.+++++|.+||++||||||+||||
T Consensus 5 ~~~~~~~~~~~~~~~p~~~~~~~~~~p~-----~~~~~~~~~~iPvIDls~~--~~~~~~~~l~~Ac~~~GFf~l~nHGI 77 (335)
T PLN02704 5 RVQAIASSSLLKETIPEEFIRSEKEQPA-----ITTFHGVDPQVPTIDLSDP--DEEKLTRLIAEASKEWGMFQIVNHGI 77 (335)
T ss_pred hHHHHHhCCCCcCCCCHHHcCCcccccc-----cccccccCCCCCeEECCCc--cHHHHHHHHHHHHHHcCEEEEEcCCC
Confidence 689998865 78999999999998873 211 123457999999976 45678899999999999999999999
Q ss_pred CHHHHHHHHHHHHHhhCCCHHHHhhhhccc-cCCccccccCccccccCCCCcccccccccCCC-----CCCCCCCCchhh
Q 022712 102 ATEVLVGMLEAARGFHELPVEVKEEYYSRE-VNRKVKYGSNFDLYESSSANWRDTLFCVMGPE-----PLDPQELPFVCR 175 (293)
Q Consensus 102 ~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~-~~~~~gY~~~~~~~~~~~~~~~e~~~~~~~p~-----~~~p~~~p~~fr 175 (293)
+.++++++++.+++||+||.|+|+++.... .....||+...........+|+|.+.....|. +.||+. ++.||
T Consensus 78 ~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~~~~d~~~~~~~p~~~~~~n~wP~~-~p~fr 156 (335)
T PLN02704 78 PSEVISKLQKVGKEFFELPQEEKEVYAKPPDSKSIEGYGTKLQKEPEGKKAWVDHLFHRIWPPSAINYQFWPKN-PPSYR 156 (335)
T ss_pred CHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCcccccccccccccccCcccceeeeEeeecCCcccchhhCccc-cchhH
Confidence 999999999999999999999999976432 22346887544333345678999875443332 269965 45699
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhccc--ccceeeeecCCCCCCCCcccccccccCCceEEEecCCCC
Q 022712 176 DITLEYSRQVHKLGTLLFELISEALGLKPDYLLNMECAK--GHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMG 253 (293)
Q Consensus 176 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~--~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd~v~ 253 (293)
+.+++|+++|.+|+.+||++|+++||+++++|.+.+... .+.+|+||||||+.++..+|+++|||+|+||||+||+++
T Consensus 157 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~v~ 236 (335)
T PLN02704 157 EVNEEYAKYLRGVADKLFKTLSLGLGLEEDELKEAVGGEELEYLLKINYYPPCPRPDLALGVVAHTDMSAITILVPNEVQ 236 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCchhhhhhhhcCCCCCCcccccCccCccCCcceEEEecCCCC
Confidence 999999999999999999999999999999998775432 357999999999999999999999999999999999999
Q ss_pred CcEEeeCCcEEEcCCCCCcEEEechhHHHHHhCCccccCC
Q 022712 254 GLQVFHQNQWIDVPPLSGAFVVNIGDLLQASLYWGISLTY 293 (293)
Q Consensus 254 GLQV~~~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT~ 293 (293)
||||+++|+|++|+|+||++||||||+||+||||+||||.
T Consensus 237 GLQV~~~g~Wi~V~p~pg~lvVNvGD~L~~~TNg~~kSt~ 276 (335)
T PLN02704 237 GLQVFRDDHWFDVKYIPNALVIHIGDQIEILSNGKYKSVL 276 (335)
T ss_pred ceeEeECCEEEeCCCCCCeEEEEechHHHHHhCCeeeccc
Confidence 9999999999999999999999999999999999999983
No 13
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=8.5e-65 Score=470.96 Aligned_cols=264 Identities=24% Similarity=0.418 Sum_probs=221.3
Q ss_pred chHHHHhcCCCCCCCcccCCCCcccccccCCCCCCCCCCCcceEeCCCccc---chHHHHHHHHHHHHHcCeEEEEeCCC
Q 022712 25 GVKGLVDAGITKVPGIFICSSEELDRDRQNSNEPTRTHFRIPVVDLKEVRF---QRAEAVSGVLKAAEEVGFFQVINHGV 101 (293)
Q Consensus 25 ~v~~l~~~~~~~vP~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~---~~~~~~~~l~~A~~~~GFF~l~nHGi 101 (293)
-||++++++ ..||++|++|++.+++.+ .........+||||||+.+.+ .+..++++|++||++||||||+||||
T Consensus 8 ~~~~~~~~~-~~~p~~~~~~~~~~~~~~--~~~~~~~~~~IPvIDls~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nHGI 84 (348)
T PLN00417 8 TVQEVVAAG-EGLPERYLHTPTGDGEGQ--PLNGAVPEMDIPAIDLSLLLSSSDDGREELSKLHSALSTWGVVQVMNHGI 84 (348)
T ss_pred hHHHHHhCC-CCCCccccCCcccccccc--cccccccCCCCCeEEChhhcCCCchHHHHHHHHHHHHHHCCEEEEEcCCC
Confidence 499998876 589999999998864200 010112345799999998743 33456799999999999999999999
Q ss_pred CHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccCccccccCCCCcccccccccCCC-----CCCCCCCCchhhH
Q 022712 102 ATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMGPE-----PLDPQELPFVCRD 176 (293)
Q Consensus 102 ~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~~~~~~~~~~~~~e~~~~~~~p~-----~~~p~~~p~~fr~ 176 (293)
+.++++++++.+++||+||.|+|+++.... ...+||+...........+|+|.+.+...|. +.||+ .|+.||+
T Consensus 85 ~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~-~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~n~wP~-~~~~fr~ 162 (348)
T PLN00417 85 TEAFLDKIYKLTKQFFALPTEEKQKCAREI-GSIQGYGNDMILSDDQVLDWIDRLYLTTYPEDQRQLKFWPQ-VPVGFRE 162 (348)
T ss_pred CHHHHHHHHHHHHHHHcCCHHHHHHhhcCC-CCccccccccccccCCCcCccceeecccCCccccccccccc-ccHHHHH
Confidence 999999999999999999999999976432 3457997544333345678999876654442 36996 5678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhccc-ccceeeeecCCCCCCCCcccccccccCCceEEEecC-CCCC
Q 022712 177 ITLEYSRQVHKLGTLLFELISEALGLKPDYLLNMECAK-GHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQD-HMGG 254 (293)
Q Consensus 177 ~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~-~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd-~v~G 254 (293)
.+++|+.+|.+|+.+||++||++|||++++|.+.+... .+.||+||||||+.++..+|+++|||+|+||||+|| +++|
T Consensus 163 ~~~~y~~~~~~l~~~ll~~la~~LGl~~~~f~~~~~~~~~~~lRl~~YPp~~~~~~~~g~~~HTD~g~lTlL~qd~~v~G 242 (348)
T PLN00417 163 TLHEYTMKQRLVIEKFFKAMARSLELEENCFLEMYGENATMDTRFNMYPPCPRPDKVIGVKPHADGSAFTLLLPDKDVEG 242 (348)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCccceeeeeecCCCCCcccccCCcCccCCCceEEEEecCCCCc
Confidence 99999999999999999999999999999998876543 356999999999999889999999999999999997 6999
Q ss_pred cEEeeCCcEEEcCCCCCcEEEechhHHHHHhCCccccCC
Q 022712 255 LQVFHQNQWIDVPPLSGAFVVNIGDLLQASLYWGISLTY 293 (293)
Q Consensus 255 LQV~~~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT~ 293 (293)
|||+++|+|++|+|+||++||||||+||+||||++|||.
T Consensus 243 LQV~~~g~Wi~V~p~pg~lVVNiGD~Le~~Tng~~kSt~ 281 (348)
T PLN00417 243 LQFLKDGKWYKAPIVPDTILINVGDQMEIMSNGIYKSPV 281 (348)
T ss_pred eeEeECCeEEECCCCCCcEEEEcChHHHHHhCCeecccc
Confidence 999999999999999999999999999999999999983
No 14
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=1.2e-64 Score=464.13 Aligned_cols=231 Identities=45% Similarity=0.736 Sum_probs=207.2
Q ss_pred CCCCcceEeCCCccc---chHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccc
Q 022712 61 THFRIPVVDLKEVRF---QRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVK 137 (293)
Q Consensus 61 ~~~~iPvIDls~l~~---~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~g 137 (293)
...+||||||+.+.+ .+..++++|++||++||||||+|||||.++++++++.+++||+||.|+|+++.... ....|
T Consensus 14 ~~~~iPvIDls~~~~~~~~~~~~~~~i~~Ace~wGfFqviNHGI~~~l~~~~~~~~~~fF~lP~eeK~k~~~~~-~~~~g 92 (322)
T KOG0143|consen 14 SELDIPVIDLSCLDSDDPGREEVVEKLREACEEWGFFQVINHGISLELLDKVKEASKEFFELPLEEKLKVASEP-GKYRG 92 (322)
T ss_pred cCCCcCeEECCCCCCcchhHHHHHHHHHHHHHHCCeeEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHHhhccCC-CCccc
Confidence 346799999997753 26788999999999999999999999999999999999999999999999987543 35689
Q ss_pred cccCccccccCCCCcccccccccCCC-----CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhc
Q 022712 138 YGSNFDLYESSSANWRDTLFCVMGPE-----PLDPQELPFVCRDITLEYSRQVHKLGTLLFELISEALGLKPDYLLNMEC 212 (293)
Q Consensus 138 Y~~~~~~~~~~~~~~~e~~~~~~~p~-----~~~p~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~ 212 (293)
|++.+........+|+|.+.+...|. ..||+ .|+.||+++++|.+++.+|+.+|+++|+++||++.+++.+.+.
T Consensus 93 Y~~~~~~~~~~~~~w~d~~~~~~~p~~~~~~~~wp~-~p~~~re~~~eY~~~~~~L~~~l~~~l~eslgl~~~~~~~~~~ 171 (322)
T KOG0143|consen 93 YGTSFILSPLKELDWRDYLTLLSAPESSFDPNLWPE-GPPEFRETMEEYAKEVMELSEKLLRLLSESLGLEPEYLEKLFG 171 (322)
T ss_pred ccccccccccccccchhheeeeccCccccCcccCcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHhhC
Confidence 99877664457789999998877774 27995 6888999999999999999999999999999999777776665
Q ss_pred c-cccceeeeecCCCCCCCCcccccccccCCceEEEecC-CCCCcEEe-eCCcEEEcCCCCCcEEEechhHHHHHhCCcc
Q 022712 213 A-KGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQD-HMGGLQVF-HQNQWIDVPPLSGAFVVNIGDLLQASLYWGI 289 (293)
Q Consensus 213 ~-~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd-~v~GLQV~-~~g~Wv~V~p~pga~vVNvGD~lq~~SnG~l 289 (293)
. ....||+|||||||+|++++|+++|||.++||+|+|| +|+||||+ ++|+|++|+|+||||||||||+||+||||+|
T Consensus 172 ~~~~~~~r~n~Yp~cp~pe~~lGl~~HtD~~~lTiLlqd~~V~GLQv~~~dg~Wi~V~P~p~a~vVNiGD~l~~lSNG~y 251 (322)
T KOG0143|consen 172 ETGGQVMRLNYYPPCPEPELTLGLGAHTDKSFLTILLQDDDVGGLQVFTKDGKWIDVPPIPGAFVVNIGDMLQILSNGRY 251 (322)
T ss_pred CccceEEEEeecCCCcCccccccccCccCcCceEEEEccCCcCceEEEecCCeEEECCCCCCCEEEEcccHHhHhhCCcc
Confidence 5 4568999999999999999999999999999999998 89999999 5999999999999999999999999999999
Q ss_pred ccCC
Q 022712 290 SLTY 293 (293)
Q Consensus 290 kAT~ 293 (293)
|+++
T Consensus 252 kSv~ 255 (322)
T KOG0143|consen 252 KSVL 255 (322)
T ss_pred cceE
Confidence 9874
No 15
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=4.3e-64 Score=466.44 Aligned_cols=249 Identities=32% Similarity=0.480 Sum_probs=213.8
Q ss_pred CCCCCcccCCCCcccccccCCCCCCCCCCCcceEeCCCccc-chHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHH
Q 022712 35 TKVPGIFICSSEELDRDRQNSNEPTRTHFRIPVVDLKEVRF-QRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAA 113 (293)
Q Consensus 35 ~~vP~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~-~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~ 113 (293)
.+||..|++|++++|. ........+||||||+.+.+ .+.+++++|++||++||||||+||||+.++++++++++
T Consensus 2 ~~~~~~~~~~~~~~~~-----~~~~~~~~~iPvIDls~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGi~~~l~~~~~~~~ 76 (345)
T PLN02750 2 GEIDPAFIQAPEHRPK-----FHLTNSDEEIPVIDLSVSTSHDKTEVASKIGEACKKWGFFQVINHGVPSELRQRVEKVA 76 (345)
T ss_pred CCCCHHHcCCchhccC-----ccccccCCCCCeEECCCCCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHH
Confidence 4799999999998873 11111245799999998643 56778899999999999999999999999999999999
Q ss_pred HHhhCCCHHHHhhhhccccCCccccccCccccccCCCCcccccccccC-----C-------------CCCCCCCCCchhh
Q 022712 114 RGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCVMG-----P-------------EPLDPQELPFVCR 175 (293)
Q Consensus 114 ~~FF~LP~eeK~~~~~~~~~~~~gY~~~~~~~~~~~~~~~e~~~~~~~-----p-------------~~~~p~~~p~~fr 175 (293)
++||+||.|+|+++.. ......||.... ......||+|.|.+... | .+.||+. |+.||
T Consensus 77 ~~FF~LP~eeK~~~~~-~~~~~~GY~~~~--~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~~~~n~wP~~-~~~fr 152 (345)
T PLN02750 77 KEFFDQTTEEKRKVKR-DEVNPMGYHDSE--HTKNIRDWKEVFDFLVQDPTLVPASPDPEDTELRKLTNQWPQN-PSHFR 152 (345)
T ss_pred HHHHcCCHHHHHhhcc-CCCCccCcCccc--ccccCCCceeEEEEeecccccccccccccccccccccccCCCC-cHHHH
Confidence 9999999999999754 333456886322 12345699999976421 1 1268864 66799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhcccccceeeeecCCCCCCCCcccccccccCCceEEEecCCCCCc
Q 022712 176 DITLEYSRQVHKLGTLLFELISEALGLKPDYLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGL 255 (293)
Q Consensus 176 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd~v~GL 255 (293)
+++++|++.|.+|+.+|+++||++||+++++|.+.+....+.+|+||||||+.++..+|+++|||+|+||||+||+++||
T Consensus 153 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lR~~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GL 232 (345)
T PLN02750 153 ELCQEYARQVEKLAFKLLELISLSLGLPADRLNGYFKDQISFARFNHYPPCPAPHLALGVGRHKDGGALTVLAQDDVGGL 232 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcceEEEEEecCCCCCcccccCcCCCCCCCeEEEEecCCCCce
Confidence 99999999999999999999999999999999998877778999999999998888999999999999999999999999
Q ss_pred EEee--CCcEEEcCCCCCcEEEechhHHHHHhCCccccC
Q 022712 256 QVFH--QNQWIDVPPLSGAFVVNIGDLLQASLYWGISLT 292 (293)
Q Consensus 256 QV~~--~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT 292 (293)
||+. +|+|++|+|+||++||||||+||+||||++|||
T Consensus 233 QV~~~~~g~Wi~V~p~pg~~vVNiGD~L~~~Tng~~~St 271 (345)
T PLN02750 233 QISRRSDGEWIPVKPIPDAFIINIGNCMQVWTNDLYWSA 271 (345)
T ss_pred EEeecCCCeEEEccCCCCeEEEEhHHHHHHHhCCeeecc
Confidence 9974 689999999999999999999999999999998
No 16
>PLN02997 flavonol synthase
Probab=100.00 E-value=9.1e-62 Score=446.58 Aligned_cols=223 Identities=31% Similarity=0.509 Sum_probs=196.9
Q ss_pred CCCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccC
Q 022712 62 HFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSN 141 (293)
Q Consensus 62 ~~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~ 141 (293)
..+||||||+.+ .+..++++|++||++||||||+||||+.++++++++++++||+||.|+|+++... ....||...
T Consensus 30 ~~~IPvIDls~~--~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~--~~~~GY~~~ 105 (325)
T PLN02997 30 AVDVPVVDLSVS--DEDFLVREVVKASEEWGVFQVVNHGIPTELMRQLQMVGKQFFELPEAEKETVAKE--EDFEGYKRN 105 (325)
T ss_pred CCCCCeEECCCC--CHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC--CCccccCcc
Confidence 457999999986 4667899999999999999999999999999999999999999999999997532 346788754
Q ss_pred ccccccCCCCcccccccccCCC-----CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhccc--
Q 022712 142 FDLYESSSANWRDTLFCVMGPE-----PLDPQELPFVCRDITLEYSRQVHKLGTLLFELISEALGLKPDYLLNMECAK-- 214 (293)
Q Consensus 142 ~~~~~~~~~~~~e~~~~~~~p~-----~~~p~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~-- 214 (293)
.. .+..+|+|.+.....|. +.||+. |+.||+++++|+.+|.+|+.+||++|+++||+++++|.+.+...
T Consensus 106 ~~---~~~~d~~e~~~~~~~p~~~~~~n~wP~~-~~~fr~~~~~y~~~~~~l~~~ll~~ia~~Lgl~~~~f~~~~~~~~~ 181 (325)
T PLN02997 106 YL---GGINNWDEHLFHRLSPPSIINYKYWPKN-PPQYREVTEEYTKHMKRLTEKILGWLSEGLGLPRETFTQSIGGETA 181 (325)
T ss_pred cc---cCCCCccceeEeeecCccccccccCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCcc
Confidence 32 45568999876544342 369964 56799999999999999999999999999999999999876533
Q ss_pred ccceeeeecCCCCCCCCcccccccccCCceEEEecCCCCCcEEeeCCcEEEcCCCCCcEEEechhHHHHHhCCccccC
Q 022712 215 GHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQASLYWGISLT 292 (293)
Q Consensus 215 ~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd~v~GLQV~~~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT 292 (293)
...+|+||||||+.++..+|+++|||+|+||||+||+++||||+++|+|++|+|+||++||||||+||+||||++|||
T Consensus 182 ~~~lRl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~Le~~TNG~~kSt 259 (325)
T PLN02997 182 EYVLRVNFYPPTQDTELVIGAAAHSDMGAIALLIPNEVPGLQAFKDEQWLDLNYINSAVVVIIGDQLMRMTNGRFKNV 259 (325)
T ss_pred cceeeeecCCCCCCcccccCccCccCCCceEEEecCCCCCEEEeECCcEEECCCCCCeEEEEechHHHHHhCCccccc
Confidence 347999999999999889999999999999999999999999999999999999999999999999999999999998
No 17
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=1.2e-61 Score=446.33 Aligned_cols=231 Identities=26% Similarity=0.395 Sum_probs=199.6
Q ss_pred CCCcceEeCCCccc----chHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccc
Q 022712 62 HFRIPVVDLKEVRF----QRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVK 137 (293)
Q Consensus 62 ~~~iPvIDls~l~~----~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~g 137 (293)
..+||||||+.+.+ .+..++++|++||++||||||+||||+.++++++++++++||+||.|+|+++........+|
T Consensus 3 ~~~iPvIDl~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~G 82 (320)
T PTZ00273 3 RASLPVIDVSPLFGGESAEKMRVAKQIDEACRTWGFFYIVGHPIPQERIEKVLKMAKTFFSLPMEEKLKIDIRKSRLHRG 82 (320)
T ss_pred CCCCCEEecHHhcCCChHHHHHHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCCC
Confidence 45799999998853 35678899999999999999999999999999999999999999999999976544445678
Q ss_pred cccCccc--cccCCCCcccccccccC-C--------------CCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHc
Q 022712 138 YGSNFDL--YESSSANWRDTLFCVMG-P--------------EPLDPQELPFVCRDITLEYSRQVHKLGTLLFELISEAL 200 (293)
Q Consensus 138 Y~~~~~~--~~~~~~~~~e~~~~~~~-p--------------~~~~p~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~L 200 (293)
|...... ......||+|.|.+... | .+.||+.. +.||+++++|+++|.+|+.+|+++|+++|
T Consensus 83 Y~~~~~e~~~~~~~~d~kE~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~-p~fr~~~~~y~~~~~~l~~~ll~~la~~L 161 (320)
T PTZ00273 83 YGAFGAEQLDPSKPYDYKETFDMGCHLPKDHPDVMAGKPLRGPNNHPTQV-EGWMELMETHYRDMQALALVLLRALALAI 161 (320)
T ss_pred CCCccccccCCCCCCCccceEEeeccCCcccchhhccccccCCCCCCCcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9754321 12345699999987531 1 12688654 46999999999999999999999999999
Q ss_pred CCChhhhhhhhcccccceeeeecCCCCCC-CCcccccccccCCceEEEecCCCCCcEEee-CCcEEEcCCCCCcEEEech
Q 022712 201 GLKPDYLLNMECAKGHCLLSNYYPACPQP-ELTMGTTKHSDPDFLTILLQDHMGGLQVFH-QNQWIDVPPLSGAFVVNIG 278 (293)
Q Consensus 201 gl~~~~~~~~~~~~~~~lr~~~YPp~~~~-~~~~g~~~HtD~~~lTlL~qd~v~GLQV~~-~g~Wv~V~p~pga~vVNvG 278 (293)
|+++++|.+.+....+.+|+||||||+.+ +..+|+++|||+|+||||+||+++||||+. +|+|++|+|+||++|||+|
T Consensus 162 gl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~GLqV~~~~g~Wi~V~p~pg~lvVNvG 241 (320)
T PTZ00273 162 GLREDFFDSKFMEPLSVFRMKHYPALPQTKKGRTVCGEHTDYGIITLLYQDSVGGLQVRNLSGEWMDVPPLEGSFVVNIG 241 (320)
T ss_pred CcCHHHHHHhhCCCcceeeeeecCCCCCccccCcccccccCCCeEEEEecCCCCceEEECCCCCEEeCCCCCCeEEEEHH
Confidence 99999999887777778999999999874 568999999999999999999999999985 7999999999999999999
Q ss_pred hHHHHHhCCccccCC
Q 022712 279 DLLQASLYWGISLTY 293 (293)
Q Consensus 279 D~lq~~SnG~lkAT~ 293 (293)
|+||+||||+||||.
T Consensus 242 D~l~~~TnG~~kSt~ 256 (320)
T PTZ00273 242 DMMEMWSNGRYRSTP 256 (320)
T ss_pred HHHHHHHCCeeeCCC
Confidence 999999999999983
No 18
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=5.6e-61 Score=440.91 Aligned_cols=225 Identities=27% Similarity=0.466 Sum_probs=195.7
Q ss_pred CCCcceEeCCCccc-chHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCcccccc
Q 022712 62 HFRIPVVDLKEVRF-QRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGS 140 (293)
Q Consensus 62 ~~~iPvIDls~l~~-~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~ 140 (293)
..+||+|||+.+.+ .+..++++|++||++||||||+|||||.++++++++++++||+||.|+|+++.. ...||..
T Consensus 4 ~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~----~~~gy~~ 79 (321)
T PLN02299 4 MESFPVIDMEKLNGEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCMEQRFKEMV----ASKGLEG 79 (321)
T ss_pred CCCCCEEECcCCCcccHHHHHHHHHHHHHhcCEEEEECCCCCHHHHHHHHHHHHHHhCCCHHHHHhccc----CCCCccc
Confidence 35699999998854 566789999999999999999999999999999999999999999999999642 2356643
Q ss_pred CccccccCCCCcccccccccCCC---CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhcc---c
Q 022712 141 NFDLYESSSANWRDTLFCVMGPE---PLDPQELPFVCRDITLEYSRQVHKLGTLLFELISEALGLKPDYLLNMECA---K 214 (293)
Q Consensus 141 ~~~~~~~~~~~~~e~~~~~~~p~---~~~p~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~---~ 214 (293)
... .....||+|.|.+...|. ..||+ .|+.||+.+++|+++|.+|+.+||++|+++|||++++|.+.+.. .
T Consensus 80 ~~~--~~~~~d~ke~~~~~~~~~~~~~~wP~-~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~ 156 (321)
T PLN02299 80 VQT--EVEDLDWESTFFLRHLPESNLADIPD-LDDEYRKVMKDFALELEKLAEELLDLLCENLGLEKGYLKKAFHGSKGP 156 (321)
T ss_pred ccc--cCCCcCHHHHcccccCCccccccCcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCCc
Confidence 221 234568999998764443 36896 56789999999999999999999999999999999999877642 3
Q ss_pred ccceeeeecCCCCCCCCcccccccccCCceEEEecC-CCCCcEEeeCCcEEEcCCCCCcEEEechhHHHHHhCCccccCC
Q 022712 215 GHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQD-HMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQASLYWGISLTY 293 (293)
Q Consensus 215 ~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd-~v~GLQV~~~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT~ 293 (293)
...+|+||||||+.++..+|+++|||+|+||||+|| +++||||+++|+|++|+|+||++||||||+||+||||+||||.
T Consensus 157 ~~~lRl~~YPp~~~~~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~l~~~Tng~~kS~~ 236 (321)
T PLN02299 157 TFGTKVSNYPPCPKPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVM 236 (321)
T ss_pred cceeeeEecCCCCCcccccCccCccCCCeEEEEEecCCCCCcCcccCCeEEECCCCCCeEEEEeCHHHHHHhCCceeccc
Confidence 447999999999999888999999999999999997 5999999999999999999999999999999999999999984
No 19
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=100.00 E-value=7.9e-61 Score=422.82 Aligned_cols=228 Identities=30% Similarity=0.473 Sum_probs=207.6
Q ss_pred CCCcceEeCCCccc----chHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccc
Q 022712 62 HFRIPVVDLKEVRF----QRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVK 137 (293)
Q Consensus 62 ~~~iPvIDls~l~~----~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~g 137 (293)
+..||+|||+.+.. .+..++++|++||++||||||+||||+..+++++++++++||+||.|||.++.+......+|
T Consensus 3 ~~~lp~idls~~~~~~~~~~~~~~~~l~~A~r~~GFf~l~~~~i~~~~~~~~~~~arqFFaLp~eeK~~~~~~~~~~~rG 82 (322)
T COG3491 3 TRDLPIIDLSELAGSDPGARRRVAQELRAACREIGFFYLVNHGIDAALIDEAFALARQFFALPVEEKLKILMVLGRQHRG 82 (322)
T ss_pred CCcCceeccHHhcCCCcHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCccccc
Confidence 45799999999853 67889999999999999999999999999999999999999999999999987654445689
Q ss_pred cccCccccccCCCCcccccccccC----------------CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 022712 138 YGSNFDLYESSSANWRDTLFCVMG----------------PEPLDPQELPFVCRDITLEYSRQVHKLGTLLFELISEALG 201 (293)
Q Consensus 138 Y~~~~~~~~~~~~~~~e~~~~~~~----------------p~~~~p~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg 201 (293)
|.........+..||+|.+.++.. || +|| .+|. ||+.+..|+++|.+++.+||++||.+|+
T Consensus 83 Y~~~~~E~t~g~~d~kE~~d~g~~~~~~~~~~~~~~~~~gpN-~wP-~ip~-~r~~ll~~~~~~~~~~~rLL~aiA~~Ld 159 (322)
T COG3491 83 YTPHGGELTDGEPDYKEGLDMGPDLDAELAGVRAGTPLHGPN-LWP-AIPG-LRDALLQYYRAMTAVGLRLLRAIALGLD 159 (322)
T ss_pred cccCcccccCCccchhhhcccccccccccCCCccCCCcCCCC-CCc-cchh-HHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 987666556677799999987531 22 798 6776 9999999999999999999999999999
Q ss_pred CChhhhhhhhcccccceeeeecCCCCCCCCcccccccccCCceEEEecCCCCCcEEeeC-CcEEEcCCCCCcEEEechhH
Q 022712 202 LKPDYLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQ-NQWIDVPPLSGAFVVNIGDL 280 (293)
Q Consensus 202 l~~~~~~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd~v~GLQV~~~-g~Wv~V~p~pga~vVNvGD~ 280 (293)
|++++|...+.++.+.||+.+||+.+..+..-|.++|||+|+||||+||+++||||+.+ |+|++|+|+||++|||+||+
T Consensus 160 L~~d~Fd~~~~d~~~~~RLlrYP~~~~~~~~~~~GaHtD~G~lTLl~Qd~~~GLqv~~~~g~Wl~v~P~pgtlvVNiGdm 239 (322)
T COG3491 160 LPEDFFDKRTSDPNSVLRLLRYPSRPAREGADGVGAHTDYGLLTLLFQDDVGGLEVRPPNGGWLDVPPIPGTLVVNIGDM 239 (322)
T ss_pred CChhhhhhccCCchheEEEEecCCCcccccccccccccCCCeEEEEEecccCCeEEecCCCCeeECCCCCCeEEEeHHHH
Confidence 99999999987888999999999999998888999999999999999999999999987 99999999999999999999
Q ss_pred HHHHhCCccccC
Q 022712 281 LQASLYWGISLT 292 (293)
Q Consensus 281 lq~~SnG~lkAT 292 (293)
||+||||+||||
T Consensus 240 Le~~Tng~lrST 251 (322)
T COG3491 240 LERWTNGRLRST 251 (322)
T ss_pred HHHHhCCeeccc
Confidence 999999999998
No 20
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.9e-60 Score=439.69 Aligned_cols=228 Identities=24% Similarity=0.368 Sum_probs=194.0
Q ss_pred CCCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccC
Q 022712 62 HFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSN 141 (293)
Q Consensus 62 ~~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~ 141 (293)
..+||+|||+.. .+..++++|++||++||||||+||||+.++++++++++++||+||.|+|+++.. . ...+||...
T Consensus 12 ~~~iP~IDl~~~--~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~k~~~-~-~~~~GY~~~ 87 (332)
T PLN03002 12 VSSLNCIDLAND--DLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEKMKVLR-N-EKHRGYTPV 87 (332)
T ss_pred CCCCCEEeCCch--hHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHcCCHHHHHhhcc-C-CCCCCcCcc
Confidence 457999999964 456789999999999999999999999999999999999999999999999753 2 346799753
Q ss_pred ccccc----cCCCCcccccccccC-C------------CCCCCCC-CCchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 022712 142 FDLYE----SSSANWRDTLFCVMG-P------------EPLDPQE-LPFVCRDITLEYSRQVHKLGTLLFELISEALGLK 203 (293)
Q Consensus 142 ~~~~~----~~~~~~~e~~~~~~~-p------------~~~~p~~-~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 203 (293)
..... ....||+|.|.+... | .+.||+. .++.||+.+++|+++|.+|+.+||++||++|||+
T Consensus 88 ~~e~~~~~~~~~~d~kE~f~~~~~~p~~~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 167 (332)
T PLN03002 88 LDEKLDPKNQINGDHKEGYYIGIEVPKDDPHWDKPFYGPNPWPDADVLPGWRETMEKYHQEALRVSMAIAKLLALALDLD 167 (332)
T ss_pred cccccccccCCCCcceeeeEecccCCCCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 32211 123699999977531 1 1268863 3456999999999999999999999999999999
Q ss_pred hhhhhh--hhcccccceeeeecCCCCCCC-CcccccccccCCceEEEecCCCCCcEEeeC-----CcEEEcCCCCCcEEE
Q 022712 204 PDYLLN--MECAKGHCLLSNYYPACPQPE-LTMGTTKHSDPDFLTILLQDHMGGLQVFHQ-----NQWIDVPPLSGAFVV 275 (293)
Q Consensus 204 ~~~~~~--~~~~~~~~lr~~~YPp~~~~~-~~~g~~~HtD~~~lTlL~qd~v~GLQV~~~-----g~Wv~V~p~pga~vV 275 (293)
+++|.+ ......+.||+||||||+.++ ..+|+++|||+|+||||+||+++||||+++ |+|++|+|+||+|||
T Consensus 168 ~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd~v~GLQV~~~~~~~~g~Wi~Vpp~pg~~VV 247 (332)
T PLN03002 168 VGYFDRTEMLGKPIATMRLLRYQGISDPSKGIYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEYVPPIKGAFIV 247 (332)
T ss_pred hHHhccccccCCCchheeeeeCCCCCCcccCccccccccCCCeEEEEeeCCCCceEEecCCCCCCCcEEECCCCCCeEEE
Confidence 999986 344455789999999998776 479999999999999999999999999864 589999999999999
Q ss_pred echhHHHHHhCCccccCC
Q 022712 276 NIGDLLQASLYWGISLTY 293 (293)
Q Consensus 276 NvGD~lq~~SnG~lkAT~ 293 (293)
||||+||+||||+||||.
T Consensus 248 NiGD~L~~wTng~~kSt~ 265 (332)
T PLN03002 248 NLGDMLERWSNGFFKSTL 265 (332)
T ss_pred EHHHHHHHHhCCeeECcC
Confidence 999999999999999984
No 21
>PLN02485 oxidoreductase
Probab=100.00 E-value=5.2e-60 Score=437.01 Aligned_cols=229 Identities=28% Similarity=0.378 Sum_probs=194.7
Q ss_pred CCcceEeCCCccc-----------chHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccc
Q 022712 63 FRIPVVDLKEVRF-----------QRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSRE 131 (293)
Q Consensus 63 ~~iPvIDls~l~~-----------~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~ 131 (293)
..||||||+.+.+ .+.+++++|++||++||||||+||||+.++++++++++++||+||.|+|+++....
T Consensus 6 ~~iPvIDl~~l~~~~~~~~~~~~~~~~~~~~~l~~Ac~~~GFf~l~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~~ 85 (329)
T PLN02485 6 KSIPVIDISPLVAKCDDPDMAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLIKKVREVTHEFFELPYEEKLKIKMTP 85 (329)
T ss_pred CCCCeEechhhhccCcccccccchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhcccC
Confidence 4699999998731 24568999999999999999999999999999999999999999999999976443
Q ss_pred cCCccccccCccccccCCCCccccccccc---------------CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 022712 132 VNRKVKYGSNFDLYESSSANWRDTLFCVM---------------GPEPLDPQELPFVCRDITLEYSRQVHKLGTLLFELI 196 (293)
Q Consensus 132 ~~~~~gY~~~~~~~~~~~~~~~e~~~~~~---------------~p~~~~p~~~p~~fr~~~~~y~~~~~~l~~~ll~~l 196 (293)
....+||.........+..||+|.|.+.. .|+ .||+. ++.||+.+++|+++|.+++.+||++|
T Consensus 86 ~~~~rGY~~~g~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n-~wP~~-~~~fr~~~~~y~~~~~~l~~~ll~~~ 163 (329)
T PLN02485 86 AAGYRGYQRIGENVTKGKPDMHEAIDCYREFKPGKYGDLGKVMEGPN-QWPEN-PQEFKALMEEYIKLCTDLSRKILRGI 163 (329)
T ss_pred CCCCCCcccccccccCCCCCcchhhhhcccCCCCcccccccccCCCC-CCCCc-cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34457897543332345578998876532 122 79964 56799999999999999999999999
Q ss_pred HHHcCCChhhhhhhh-cccccceeeeecCCCCC----CCCcccccccccCCceEEEecC-CCCCcEEee-CCcEEEcCCC
Q 022712 197 SEALGLKPDYLLNME-CAKGHCLLSNYYPACPQ----PELTMGTTKHSDPDFLTILLQD-HMGGLQVFH-QNQWIDVPPL 269 (293)
Q Consensus 197 a~~Lgl~~~~~~~~~-~~~~~~lr~~~YPp~~~----~~~~~g~~~HtD~~~lTlL~qd-~v~GLQV~~-~g~Wv~V~p~ 269 (293)
|++||+++++|.+.+ ....+.+|++|||||+. ++..+|+++|||+|+||||+|| +++||||+. +|+|++|+|+
T Consensus 164 a~~Lgl~~~~f~~~~~~~~~~~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~~GLqV~~~~g~Wi~V~p~ 243 (329)
T PLN02485 164 ALALGGSPDEFEGKMAGDPFWVMRIIGYPGVSNLNGPPENDIGCGAHTDYGLLTLVNQDDDITALQVRNLSGEWIWAIPI 243 (329)
T ss_pred HHHcCCChHHhhhhhccCccceEEEEeCCCCccccCCcccCcccccccCCCeEEEEeccCCCCeeeEEcCCCcEEECCCC
Confidence 999999999987654 34456899999999986 5578999999999999999997 589999985 7999999999
Q ss_pred CCcEEEechhHHHHHhCCccccCC
Q 022712 270 SGAFVVNIGDLLQASLYWGISLTY 293 (293)
Q Consensus 270 pga~vVNvGD~lq~~SnG~lkAT~ 293 (293)
||++||||||+||+||||++|||.
T Consensus 244 pg~~vVNiGD~L~~~TnG~~~St~ 267 (329)
T PLN02485 244 PGTFVCNIGDMLKIWSNGVYQSTL 267 (329)
T ss_pred CCcEEEEhHHHHHHHHCCEeeCCC
Confidence 999999999999999999999983
No 22
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=5.7e-60 Score=436.75 Aligned_cols=226 Identities=23% Similarity=0.396 Sum_probs=188.7
Q ss_pred CCCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCc--cccc
Q 022712 62 HFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRK--VKYG 139 (293)
Q Consensus 62 ~~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~--~gY~ 139 (293)
..+||+|||+.+ .+++|++||++||||||+||||+.++++++++.+++||+||.|+|+++........ .||.
T Consensus 36 ~~~IPvIDls~~------~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~s~~FF~LP~eeK~k~~~~~~~~~~~~g~~ 109 (341)
T PLN02984 36 DIDIPVIDMECL------DMEKLREACKDWGIFRLENHGIPLTLMSQLKEISESLLSLPFESKRELFGVNSPLSYFWGTP 109 (341)
T ss_pred cCCCCeEeCcHH------HHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhcccCCCCccccCcc
Confidence 456999999875 25899999999999999999999999999999999999999999999752221111 1221
Q ss_pred cCccc----c---ccCCCCcccccccccCCC---CCCCCC--CCchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCC--hh
Q 022712 140 SNFDL----Y---ESSSANWRDTLFCVMGPE---PLDPQE--LPFVCRDITLEYSRQVHKLGTLLFELISEALGLK--PD 205 (293)
Q Consensus 140 ~~~~~----~---~~~~~~~~e~~~~~~~p~---~~~p~~--~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~--~~ 205 (293)
..... . .....||+|.|.+...+. ..||.. .++.||+++++|+++|.+|+.+||++||++||++ ++
T Consensus 110 ~~~~~~~~~~~~~~~~~~D~kE~f~~~~~~~~~~~~~p~~~~~~p~fr~~~~~y~~~~~~La~~ll~~lA~~Lgl~~~~~ 189 (341)
T PLN02984 110 ALTPSGKALSRGPQESNVNWVEGFNIPLSSLSLLQTLSCSDPKLESFRVLMEEYGKHLTRIAVTLFEAIAKTLSLELSGD 189 (341)
T ss_pred cccccccccccccccCCCCeeeEEeCcCCchhhhhhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchh
Confidence 10110 0 012469999998764321 123211 1346999999999999999999999999999999 99
Q ss_pred hhhhhhcccccceeeeecCCCCCCCCcccccccccCCceEEEecCCCCCcEEeeCCcEEEcCCCCCcEEEechhHHHHHh
Q 022712 206 YLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQASL 285 (293)
Q Consensus 206 ~~~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd~v~GLQV~~~g~Wv~V~p~pga~vVNvGD~lq~~S 285 (293)
+|.+.+....+.+|+||||||+.++..+|+++|||+|+||||+||+++||||+++|+|++|+|+||++|||+||+||+||
T Consensus 190 ~f~~~~~~~~~~lRl~~YPp~~~~~~~~g~~aHTD~g~lTlL~Qd~v~GLQV~~~g~Wv~V~p~pgalVVNiGD~Le~wT 269 (341)
T PLN02984 190 QKMSYLSESTGVIRVYRYPQCSNEAEAPGMEVHTDSSVISILNQDEVGGLEVMKDGEWFNVKPIANTLVVNLGDMMQVIS 269 (341)
T ss_pred HHHHHhcCccceEEEEeCCCCCCcccccCccCccCCCceEEEEeCCCCCeeEeeCCceEECCCCCCeEEEECChhhhhhc
Confidence 99888777777899999999998888999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCC
Q 022712 286 YWGISLTY 293 (293)
Q Consensus 286 nG~lkAT~ 293 (293)
||++|||.
T Consensus 270 Ng~~kSt~ 277 (341)
T PLN02984 270 DDEYKSVL 277 (341)
T ss_pred CCeeeCCC
Confidence 99999983
No 23
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=100.00 E-value=2.2e-59 Score=426.66 Aligned_cols=222 Identities=29% Similarity=0.463 Sum_probs=190.0
Q ss_pred CcceEeCCCccc-chHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccCc
Q 022712 64 RIPVVDLKEVRF-QRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNF 142 (293)
Q Consensus 64 ~iPvIDls~l~~-~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~~ 142 (293)
+||||||+.+.+ .+.+++++|++||++||||||+||||+.++++++++.+++||+||.|+|.. ..... .++...
T Consensus 2 ~iPvIDls~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~e~k~~--~~~~~--~~~~~~- 76 (303)
T PLN02403 2 EIPVIDFDQLDGEKRSKTMSLLHQACEKWGFFQVENHGIDKKLMEKVKQLVNSHYEENLKESFY--ESEIA--KALDNE- 76 (303)
T ss_pred CCCeEeCccCCcccHHHHHHHHHHHHHhCceEEEECCCCCHHHHHHHHHHHHHHhcCCHHHHhh--ccccc--Cccccc-
Confidence 599999998754 567789999999999999999999999999999999999999999999862 11111 112110
Q ss_pred cccccCCCCcccccccccCCC---CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhcc---ccc
Q 022712 143 DLYESSSANWRDTLFCVMGPE---PLDPQELPFVCRDITLEYSRQVHKLGTLLFELISEALGLKPDYLLNMECA---KGH 216 (293)
Q Consensus 143 ~~~~~~~~~~~e~~~~~~~p~---~~~p~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~---~~~ 216 (293)
......||+|.|.+...|. +.||+ .|+.||+++++|+++|.+|+.+|+++|+++|||++++|.+.+.. ...
T Consensus 77 --~~~~~~d~kE~~~~~~~p~~~~~~wP~-~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~ 153 (303)
T PLN02403 77 --GKTSDVDWESSFFIWHRPTSNINEIPN-LSEDLRKTMDEYIAQLIKLAEKLSELMSENLGLDKDYIKEAFSGNKGPSV 153 (303)
T ss_pred --CCCCCccHhhhcccccCCccchhhCCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCCCccc
Confidence 1134569999998865553 26995 56789999999999999999999999999999999999887652 234
Q ss_pred ceeeeecCCCCCCCCcccccccccCCceEEEecC-CCCCcEEeeCCcEEEcCCCC-CcEEEechhHHHHHhCCccccCC
Q 022712 217 CLLSNYYPACPQPELTMGTTKHSDPDFLTILLQD-HMGGLQVFHQNQWIDVPPLS-GAFVVNIGDLLQASLYWGISLTY 293 (293)
Q Consensus 217 ~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd-~v~GLQV~~~g~Wv~V~p~p-ga~vVNvGD~lq~~SnG~lkAT~ 293 (293)
.+|+||||||++++..+|+++|||+|+||||+|+ +++||||+++|+|++|+|+| |++||||||+||+||||++|||.
T Consensus 154 ~lrl~~YP~~~~~~~~~G~~~HtD~g~lTlL~q~~~v~GLqV~~~g~Wi~V~p~p~~~lvVNvGD~L~~~Tng~~~S~~ 232 (303)
T PLN02403 154 GTKVAKYPECPRPELVRGLREHTDAGGIILLLQDDQVPGLEFLKDGKWVPIPPSKNNTIFVNTGDQLEVLSNGRYKSTL 232 (303)
T ss_pred eeeeEcCCCCCCcccccCccCccCCCeEEEEEecCCCCceEeccCCeEEECCCCCCCEEEEEehHHHHHHhCCeeeccc
Confidence 6999999999998888999999999999999997 59999999999999999999 69999999999999999999984
No 24
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=5.1e-59 Score=429.45 Aligned_cols=220 Identities=28% Similarity=0.524 Sum_probs=187.3
Q ss_pred CCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccCc
Q 022712 63 FRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNF 142 (293)
Q Consensus 63 ~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~~ 142 (293)
..||||||+.. ...++|++||++||||||+||||+.++++++++.+++||+||.|+|+++... ...||+...
T Consensus 25 ~~iPvIDls~~-----~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~e~K~~~~~~---~~~Gy~~~~ 96 (335)
T PLN02156 25 VLIPVIDLTDS-----DAKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIGFFALPHSLKDKAGPP---DPFGYGTKR 96 (335)
T ss_pred CCCCcccCCCh-----HHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhcCCC---CCcccCccc
Confidence 46999999853 3467999999999999999999999999999999999999999999997432 345886432
Q ss_pred cccccCCCCcccccccccCCC-------CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhhhhhcc-
Q 022712 143 DLYESSSANWRDTLFCVMGPE-------PLDPQELPFVCRDITLEYSRQVHKLGTLLFELISEALGLK-PDYLLNMECA- 213 (293)
Q Consensus 143 ~~~~~~~~~~~e~~~~~~~p~-------~~~p~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~-~~~~~~~~~~- 213 (293)
. ......+|+|.+.+...|. +.||+ .|+.||+++++|+++|++|+.+|+++|+++||++ +++|.+++..
T Consensus 97 ~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~wp~-~p~~fr~~~~~Y~~~~~~L~~~ll~~la~~LGl~~~~~f~~~~~~~ 174 (335)
T PLN02156 97 I-GPNGDVGWLEYILLNANLCLESHKTTAVFRH-TPAIFREAVEEYMKEMKRMSSKVLEMVEEELKIEPKEKLSKLVKVK 174 (335)
T ss_pred c-CCCCCCCceeeEeeecCCccccccchhcCcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCcHHHHHHHhcCC
Confidence 2 1233468999987654321 25885 5778999999999999999999999999999996 4788877542
Q ss_pred -cccceeeeecCCCCCC--CCcccccccccCCceEEEecCCCCCcEEe-eCCcEEEcCCCCCcEEEechhHHHHHhCCcc
Q 022712 214 -KGHCLLSNYYPACPQP--ELTMGTTKHSDPDFLTILLQDHMGGLQVF-HQNQWIDVPPLSGAFVVNIGDLLQASLYWGI 289 (293)
Q Consensus 214 -~~~~lr~~~YPp~~~~--~~~~g~~~HtD~~~lTlL~qd~v~GLQV~-~~g~Wv~V~p~pga~vVNvGD~lq~~SnG~l 289 (293)
..+.+|+||||||+.. +..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||+|||||||+||+||||+|
T Consensus 175 ~~~~~lRl~~YP~~~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~~g~Wi~Vpp~pga~VVNiGD~l~~wTNg~~ 254 (335)
T PLN02156 175 ESDSCLRMNHYPEKEETPEKVEIGFGEHTDPQLISLLRSNDTAGLQICVKDGTWVDVPPDHSSFFVLVGDTLQVMTNGRF 254 (335)
T ss_pred CccceEeEEeCCCCCCCccccccCCCCccCCCceEEEEeCCCCceEEEeCCCCEEEccCCCCcEEEEhHHHHHHHhCCee
Confidence 3468999999999853 35799999999999999999999999997 5799999999999999999999999999999
Q ss_pred ccC
Q 022712 290 SLT 292 (293)
Q Consensus 290 kAT 292 (293)
|||
T Consensus 255 kSt 257 (335)
T PLN02156 255 KSV 257 (335)
T ss_pred ecc
Confidence 998
No 25
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=9.9e-58 Score=416.35 Aligned_cols=217 Identities=27% Similarity=0.401 Sum_probs=182.6
Q ss_pred CCCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccC
Q 022712 62 HFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSN 141 (293)
Q Consensus 62 ~~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~ 141 (293)
...||||||+.+. ..+++|++||++||||||+||||+.++++++++++++||+||.|+|+++... ....||...
T Consensus 3 ~~~iPvIDls~~~----~~~~~l~~Ac~~~GfF~l~nHGi~~~l~~~~~~~~~~FF~LP~e~K~~~~~~--~~~~GY~~~ 76 (300)
T PLN02365 3 EVNIPTIDLEEFP----GQIEKLREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFDLPDEVKRRNTDV--ILGSGYMAP 76 (300)
T ss_pred cCCCCEEEChhhH----HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhccCC--CCCCCCCCc
Confidence 3469999999872 2468999999999999999999999999999999999999999999995422 234688642
Q ss_pred ccccccCCCCccccccccc--CCC--CCCCCC--CCchhhHHHHHHHHHHHHHHHHHHHHHHHHcCC-Chhhhhhhhccc
Q 022712 142 FDLYESSSANWRDTLFCVM--GPE--PLDPQE--LPFVCRDITLEYSRQVHKLGTLLFELISEALGL-KPDYLLNMECAK 214 (293)
Q Consensus 142 ~~~~~~~~~~~~e~~~~~~--~p~--~~~p~~--~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl-~~~~~~~~~~~~ 214 (293)
. ...+|+|.+.+.. .+. ..||.. .++.||+.+++|+++|++|+.+|+++|+++||| ++++|.+.
T Consensus 77 ~-----~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~f~~~---- 147 (300)
T PLN02365 77 S-----EVNPLYEALGLYDMASPQAVDTFCSQLDASPHQRETIKKYAKAIHDLAMDLARKLAESLGLVEGDFFQGW---- 147 (300)
T ss_pred C-----CCCCchhheecccccCchhhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHhhc----
Confidence 2 1235777765431 111 134421 245699999999999999999999999999999 88888764
Q ss_pred ccceeeeecCCCCCCCCcccccccccCCceEEEecCC-CCCcEEee--CCcEEEcCCCCCcEEEechhHHHHHhCCcccc
Q 022712 215 GHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDH-MGGLQVFH--QNQWIDVPPLSGAFVVNIGDLLQASLYWGISL 291 (293)
Q Consensus 215 ~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd~-v~GLQV~~--~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkA 291 (293)
...+|+|||||||.++..+|+++|||+|+||||+||+ ++||||++ +|+|++|+|+||++|||+||+||+||||+|||
T Consensus 148 ~~~lr~~~YP~~p~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~~~g~Wi~V~p~pga~vVNiGD~l~~~TNG~~~S 227 (300)
T PLN02365 148 PSQFRINKYNFTPETVGSSGVQIHTDSGFLTILQDDENVGGLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNGRLCN 227 (300)
T ss_pred ccceeeeecCCCCCccccccccCccCCCceEEEecCCCcCceEEEECCCCeEEecCCCCCeEEEEhhHHHHHHhCCceec
Confidence 3579999999999988899999999999999999984 99999987 48999999999999999999999999999999
Q ss_pred CC
Q 022712 292 TY 293 (293)
Q Consensus 292 T~ 293 (293)
|.
T Consensus 228 t~ 229 (300)
T PLN02365 228 VK 229 (300)
T ss_pred cc
Confidence 83
No 26
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=4.1e-48 Score=345.92 Aligned_cols=184 Identities=30% Similarity=0.453 Sum_probs=158.4
Q ss_pred HHHHHHHhhC-CCHHHHhhhhcccc-CCccccccCccc--cccCCCCcccccccccCCC-----CCCCCCCCchhhHHHH
Q 022712 109 MLEAARGFHE-LPVEVKEEYYSREV-NRKVKYGSNFDL--YESSSANWRDTLFCVMGPE-----PLDPQELPFVCRDITL 179 (293)
Q Consensus 109 ~~~~~~~FF~-LP~eeK~~~~~~~~-~~~~gY~~~~~~--~~~~~~~~~e~~~~~~~p~-----~~~p~~~p~~fr~~~~ 179 (293)
|++.+++||+ ||.|+|+++..... ...+||+..... ...+..||+|.|.+...|. +.||+. |+.||++++
T Consensus 1 ~~~~~~~FF~~LP~eeK~~~~~~~~~~~~~GY~~~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~n~wP~~-~~~f~~~~~ 79 (262)
T PLN03001 1 MRSLGLSFFKDSPMEEKLRYACDPGSAASEGYGSRMLLGAKDDTVLDWRDFFDHHTFPLSRRNPSHWPDF-PPDYREVVG 79 (262)
T ss_pred ChHHHHHHHhhCCHHHHHHhhcCCCCCCccccccccccccCCCCccCchheeEeeecCccccchhhCCCC-cHHHHHHHH
Confidence 3578999997 99999999754321 234688644331 1234569999998765442 279964 677999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhcccccceeeeecCCCCCCCCcccccccccCCceEEEecCCCCCcEEee
Q 022712 180 EYSRQVHKLGTLLFELISEALGLKPDYLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFH 259 (293)
Q Consensus 180 ~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd~v~GLQV~~ 259 (293)
+|+++|.+|+.+|+++|+++||+++++|.+.+......+|++|||||++++..+|+++|||+|+||||+||+++||||++
T Consensus 80 ~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~ 159 (262)
T PLN03001 80 EYGDCMKALAQKLLAFISESLGLPCSCIEDAVGDFYQNITVSYYPPCPQPELTLGLQSHSDFGAITLLIQDDVEGLQLLK 159 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcchhheeecCCCCCCcccccCCcCCcCCCeeEEEEeCCCCceEEee
Confidence 99999999999999999999999999999877666678999999999999999999999999999999999999999999
Q ss_pred CCcEEEcCCCCCcEEEechhHHHHHhCCccccCC
Q 022712 260 QNQWIDVPPLSGAFVVNIGDLLQASLYWGISLTY 293 (293)
Q Consensus 260 ~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT~ 293 (293)
+|+|++|+|+||++||||||+||+||||+||||.
T Consensus 160 ~g~Wi~V~p~p~a~vVNiGD~l~~~tng~~~S~~ 193 (262)
T PLN03001 160 DAEWLMVPPISDAILIIIADQTEIITNGNYKSAQ 193 (262)
T ss_pred CCeEEECCCCCCcEEEEccHHHHHHhCCcccccc
Confidence 9999999999999999999999999999999983
No 27
>PLN03176 flavanone-3-hydroxylase; Provisional
Probab=99.90 E-value=1.2e-23 Score=166.62 Aligned_cols=110 Identities=24% Similarity=0.380 Sum_probs=88.2
Q ss_pred chHHHHhcCCCCCCCcccCCCCcccccccCCCCCCCCCCCcceEeCCCccc---chHHHHHHHHHHHHHcCeEEEEeCCC
Q 022712 25 GVKGLVDAGITKVPGIFICSSEELDRDRQNSNEPTRTHFRIPVVDLKEVRF---QRAEAVSGVLKAAEEVGFFQVINHGV 101 (293)
Q Consensus 25 ~v~~l~~~~~~~vP~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~---~~~~~~~~l~~A~~~~GFF~l~nHGi 101 (293)
.|+.|... ..+|..|+++.+++|. ........+||||||+.+.+ .+..++++|++||++||||||+||||
T Consensus 5 ~~~~l~~~--~~~p~~~~~~~~~~p~-----~~~~~~~~~iPvIDls~~~~~~~~~~~~~~~L~~A~~~~GFf~l~nhGi 77 (120)
T PLN03176 5 TLTALAEE--KTLQASFVRDEDERPK-----VAYNQFSNEIPVISIAGIDDGGEKRAEICNKIVEACEEWGVFQIVDHGV 77 (120)
T ss_pred HHHHHhcc--CCCCHhhcCChhhCcC-----ccccccCCCCCeEECccccCCchHHHHHHHHHHHHHHHCCEEEEECCCC
Confidence 34555443 7899999999998872 11112235799999998853 35568999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccCc
Q 022712 102 ATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNF 142 (293)
Q Consensus 102 ~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~~ 142 (293)
+.++++++++.+++||+||.|+|+++.. ..++..||+..+
T Consensus 78 ~~elid~~~~~~~~FF~LP~e~K~k~~~-~~~~~~gy~~~~ 117 (120)
T PLN03176 78 DAKLVSEMTTLAKEFFALPPEEKLRFDM-SGGKKGGFIVSS 117 (120)
T ss_pred CHHHHHHHHHHHHHHHCCCHHHHHhccc-CCCccCCcchhc
Confidence 9999999999999999999999999754 445567887544
No 28
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.90 E-value=9.6e-24 Score=166.32 Aligned_cols=95 Identities=31% Similarity=0.502 Sum_probs=79.6
Q ss_pred cceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccCccc
Q 022712 65 IPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDL 144 (293)
Q Consensus 65 iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~~~~ 144 (293)
||||||+.....+..++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++. + +...+||......
T Consensus 1 iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~-~-~~~~~Gy~~~~~~ 78 (116)
T PF14226_consen 1 IPVIDLSPDPADREEVAEQLRDACEEWGFFYLVNHGIPQELIDRVFAAAREFFALPLEEKQKYA-R-SPSYRGYSPPGSE 78 (116)
T ss_dssp --EEEHGGCHHHHHHHHHHHHHHHHHTSEEEEESSSSSHHHHHHHHHHHHHHHCSHHHHHHHHB-C-CTTCSEEEESEEE
T ss_pred CCeEECCCCCccHHHHHHHHHHHHHhCCEEEEecccccchhhHHHHHHHHHHHHhhHHHHHHhc-C-CCCCcccccCCcc
Confidence 7999999732378899999999999999999999999999999999999999999999999984 2 2467899875544
Q ss_pred cccC-CCCcccccccccC
Q 022712 145 YESS-SANWRDTLFCVMG 161 (293)
Q Consensus 145 ~~~~-~~~~~e~~~~~~~ 161 (293)
.... ..||+|.|.+...
T Consensus 79 ~~~~~~~d~~E~~~~~~~ 96 (116)
T PF14226_consen 79 STDGGKPDWKESFNIGPD 96 (116)
T ss_dssp CCTTCCCCSEEEEEEECC
T ss_pred ccCCCCCCceEEeEEECC
Confidence 3343 7899999998765
No 29
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.78 E-value=3.1e-19 Score=136.40 Aligned_cols=75 Identities=44% Similarity=0.716 Sum_probs=61.4
Q ss_pred cceeeeecCCCCCCCCcccccccccC--CceEEEecCCCCCcEEeeCCcEEEcCCCCCcEEEechhHHHHHhCCccccCC
Q 022712 216 HCLLSNYYPACPQPELTMGTTKHSDP--DFLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQASLYWGISLTY 293 (293)
Q Consensus 216 ~~lr~~~YPp~~~~~~~~g~~~HtD~--~~lTlL~qd~v~GLQV~~~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT~ 293 (293)
..+|+++||| ++...|+++|+|. +++|+|+|++++||||..+++|+.|++.++.++||+||+|++||||.++|+.
T Consensus 2 ~~~~~~~Y~~---~~~~~~~~~H~D~~~~~~Til~~~~~~gL~~~~~~~~~~v~~~~~~~~v~~G~~l~~~t~g~~~~~~ 78 (98)
T PF03171_consen 2 SQLRLNRYPP---PENGVGIGPHTDDEDGLLTILFQDEVGGLQVRDDGEWVDVPPPPGGFIVNFGDALEILTNGRYPATL 78 (98)
T ss_dssp -EEEEEEE-S---CCGCEEEEEEEES--SSEEEEEETSTS-EEEEETTEEEE----TTCEEEEEBHHHHHHTTTSS----
T ss_pred CEEEEEECCC---cccCCceeCCCcCCCCeEEEEecccchheeccccccccCccCccceeeeeceeeeecccCCccCCce
Confidence 4689999999 6677899999999 9999999999999999999999999999999999999999999999999874
No 30
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=87.95 E-value=3 Score=34.68 Aligned_cols=79 Identities=19% Similarity=0.084 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHcCCChhhhhhhhcccccceeeeecCCCCCCCCcccccccccCC--------ceEEEec--C-CC-CCc
Q 022712 188 LGTLLFELISEALGLKPDYLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPD--------FLTILLQ--D-HM-GGL 255 (293)
Q Consensus 188 l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~--------~lTlL~q--d-~v-~GL 255 (293)
+...|.+.++..++++.. .......+++..|.+- -...+|.|.. .+|+++. + .. |.|
T Consensus 60 ~~~~l~~~i~~~~~~~~~-----~~~~~~~~~~~~Y~~g------~~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~~ 128 (178)
T smart00702 60 VIERIRQRLADFLGLLRG-----LPLSAEDAQVARYGPG------GHYGPHVDNFEDDENGDRIATFLLYLNDVEEGGEL 128 (178)
T ss_pred HHHHHHHHHHHHHCCCch-----hhccCcceEEEEECCC------CcccCcCCCCCCCCCCCeEEEEEEEeccCCcCceE
Confidence 334455555555665421 1122345777888762 2367899966 6888875 2 23 446
Q ss_pred EEeeCCc--EEEcCCCCCcEEEec
Q 022712 256 QVFHQNQ--WIDVPPLSGAFVVNI 277 (293)
Q Consensus 256 QV~~~g~--Wv~V~p~pga~vVNv 277 (293)
.+...+. -..|.|.+|.+||.-
T Consensus 129 ~f~~~~~~~~~~v~P~~G~~v~f~ 152 (178)
T smart00702 129 VFPGLGLMVCATVKPKKGDLLFFP 152 (178)
T ss_pred EecCCCCccceEEeCCCCcEEEEe
Confidence 6655443 678999999988865
No 31
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=86.16 E-value=0.52 Score=35.24 Aligned_cols=55 Identities=27% Similarity=0.339 Sum_probs=35.4
Q ss_pred eeeeecCCCCCCCCcccccccccC-----CceEEEec--CC-----CCCcEEee----CCcEEEcC-----CCCCcEEEe
Q 022712 218 LLSNYYPACPQPELTMGTTKHSDP-----DFLTILLQ--DH-----MGGLQVFH----QNQWIDVP-----PLSGAFVVN 276 (293)
Q Consensus 218 lr~~~YPp~~~~~~~~g~~~HtD~-----~~lTlL~q--d~-----v~GLQV~~----~g~Wv~V~-----p~pga~vVN 276 (293)
|++++|++- -.+.+|+|. ..+|+|+. +. .|.|++.. ++....++ |.+|.+|+.
T Consensus 1 ~~~~~y~~G------~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F 74 (100)
T PF13640_consen 1 MQLNRYPPG------GFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIF 74 (100)
T ss_dssp -EEEEEETT------EEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEE
T ss_pred CEEEEECcC------CEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEE
Confidence 467777542 247899998 58999853 22 36688874 34566666 999999998
Q ss_pred ch
Q 022712 277 IG 278 (293)
Q Consensus 277 vG 278 (293)
-+
T Consensus 75 ~~ 76 (100)
T PF13640_consen 75 PS 76 (100)
T ss_dssp ES
T ss_pred eC
Confidence 76
No 32
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.; PDB: 2CSG_A 2DBI_A 2DBN_A.
Probab=76.67 E-value=2.4 Score=40.53 Aligned_cols=54 Identities=13% Similarity=0.209 Sum_probs=37.8
Q ss_pred CCCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhC
Q 022712 62 HFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHE 118 (293)
Q Consensus 62 ~~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~ 118 (293)
..-||.||++.+. .....++..+..++.|++.|.|+ ||.+......+..++|.+
T Consensus 47 ~~~IP~i~f~di~--~~~~~~~~~~~ir~rG~~VIR~V-vp~~ea~~w~~e~~~Y~~ 100 (416)
T PF07350_consen 47 SSIIPEIDFADIE--NGGVSEEFLAEIRRRGCVVIRGV-VPREEALAWKQELKEYLK 100 (416)
T ss_dssp --SS-EEEHHHHH--CT---HHHHHHHHHHSEEEECTS-S-HHHHHHHHHHHHHHHH
T ss_pred CCCCceeeHHHHh--CCCCCHHHHHHHHhcCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 3469999999884 33355788899999999999886 898877777777777653
No 33
>PRK08130 putative aldolase; Validated
Probab=71.95 E-value=4.9 Score=34.78 Aligned_cols=37 Identities=14% Similarity=0.199 Sum_probs=31.0
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVA 102 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~ 102 (293)
.||++++... +..+.++++.+++++...+.+.|||+=
T Consensus 127 ~i~v~~y~~~--g~~~la~~~~~~l~~~~~vll~nHGvi 163 (213)
T PRK08130 127 HVPLIPYYRP--GDPAIAEALAGLAARYRAVLLANHGPV 163 (213)
T ss_pred ccceECCCCC--ChHHHHHHHHHHhccCCEEEEcCCCCe
Confidence 5899988654 456788899999999999999999963
No 34
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=71.19 E-value=5 Score=33.81 Aligned_cols=37 Identities=22% Similarity=0.390 Sum_probs=30.7
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVA 102 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~ 102 (293)
.||++++... +..+.++++.+++++...+.|.|||+=
T Consensus 120 ~v~v~~~~~~--g~~~la~~~~~~l~~~~~vll~nHGv~ 156 (184)
T PRK08333 120 KIPILPFRPA--GSVELAEQVAEAMKEYDAVIMERHGIV 156 (184)
T ss_pred CEeeecCCCC--CcHHHHHHHHHHhccCCEEEEcCCCCE
Confidence 6999998754 456778889999999999999999973
No 35
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=70.57 E-value=35 Score=29.70 Aligned_cols=63 Identities=17% Similarity=0.108 Sum_probs=39.4
Q ss_pred ceeeeecCCCCCCCCcccccccccC-----C--ceEEEecCCCCC-cEEe---eCCcEEEcCCCCCcEEEechhHHHHHh
Q 022712 217 CLLSNYYPACPQPELTMGTTKHSDP-----D--FLTILLQDHMGG-LQVF---HQNQWIDVPPLSGAFVVNIGDLLQASL 285 (293)
Q Consensus 217 ~lr~~~YPp~~~~~~~~g~~~HtD~-----~--~lTlL~qd~v~G-LQV~---~~g~Wv~V~p~pga~vVNvGD~lq~~S 285 (293)
...+|+|.+- . +++.|.|- + ++.|-+ +.+. +.+. +.+.+..+.-.+|.++|.-|+. +.|=
T Consensus 117 a~LvN~Y~~G-----~-~mg~H~D~~E~~~~~pI~SvSL--G~~~~F~~~~~~~~~~~~~l~L~~Gdllvm~G~s-r~~~ 187 (213)
T PRK15401 117 ACLINRYAPG-----A-KLSLHQDKDERDFRAPIVSVSL--GLPAVFQFGGLKRSDPLQRILLEHGDVVVWGGPS-RLRY 187 (213)
T ss_pred EEEEEeccCc-----C-ccccccCCCcccCCCCEEEEeC--CCCeEEEecccCCCCceEEEEeCCCCEEEECchH-hhee
Confidence 4678999753 2 68889984 2 122222 1111 2222 2356899999999999999996 5554
Q ss_pred CCc
Q 022712 286 YWG 288 (293)
Q Consensus 286 nG~ 288 (293)
.|.
T Consensus 188 HgV 190 (213)
T PRK15401 188 HGI 190 (213)
T ss_pred ccC
Confidence 444
No 36
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=69.57 E-value=26 Score=30.77 Aligned_cols=30 Identities=20% Similarity=0.072 Sum_probs=20.9
Q ss_pred CCCcEEeeCCcEEEcCCCCCcEEEechhHH
Q 022712 252 MGGLQVFHQNQWIDVPPLSGAFVVNIGDLL 281 (293)
Q Consensus 252 v~GLQV~~~g~Wv~V~p~pga~vVNvGD~l 281 (293)
.|.|.+.....=..|+|..|.+||.-...+
T Consensus 129 GGEl~~~~~~g~~~Vkp~aG~~vlfps~~l 158 (226)
T PRK05467 129 GGELVIEDTYGEHRVKLPAGDLVLYPSTSL 158 (226)
T ss_pred CCceEEecCCCcEEEecCCCeEEEECCCCc
Confidence 455877754333689999999998865543
No 37
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=60.70 E-value=9.6 Score=33.16 Aligned_cols=37 Identities=16% Similarity=0.222 Sum_probs=30.4
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVA 102 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~ 102 (293)
.+|++++... ...+.++.+.+++.+...+.|.|||+=
T Consensus 127 ~v~~~~y~~~--gs~ela~~v~~~l~~~~~vlL~nHGv~ 163 (217)
T PRK05874 127 DVRCTEYAAS--GTPEVGRNAVRALEGRAAALIANHGLV 163 (217)
T ss_pred ceeeecCCCC--CcHHHHHHHHHHhCcCCEEEEcCCCCe
Confidence 4788877654 456888999999999999999999973
No 38
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=56.61 E-value=15 Score=30.77 Aligned_cols=35 Identities=31% Similarity=0.336 Sum_probs=28.2
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGV 101 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi 101 (293)
.||++ .... +..+.++.+.+++.+.-.+.|.|||+
T Consensus 115 ~ipv~-~~~~--~~~~la~~v~~~l~~~~~vll~nHG~ 149 (181)
T PRK08660 115 TIPVV-GGDI--GSGELAENVARALSEHKGVVVRGHGT 149 (181)
T ss_pred CEeEE-eCCC--CCHHHHHHHHHHHhhCCEEEEcCCCc
Confidence 58988 4333 45677889999999999999999996
No 39
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=54.32 E-value=33 Score=28.61 Aligned_cols=64 Identities=23% Similarity=0.237 Sum_probs=38.0
Q ss_pred ceeeeecCCCCCCCCcccccccccCCce-------EEEecCCCCCcEEeeC---CcEEEcCCCCCcEEEechhHHHHHhC
Q 022712 217 CLLSNYYPACPQPELTMGTTKHSDPDFL-------TILLQDHMGGLQVFHQ---NQWIDVPPLSGAFVVNIGDLLQASLY 286 (293)
Q Consensus 217 ~lr~~~YPp~~~~~~~~g~~~HtD~~~l-------TlL~qd~v~GLQV~~~---g~Wv~V~p~pga~vVNvGD~lq~~Sn 286 (293)
...+|+|++ .. ++++|.|.-.+ ||-+-. ..=+.+... +..+.|.-.+|+++|.-|+.=..| .
T Consensus 98 ~~liN~Y~~-----g~-~i~~H~D~~~~~~~~~I~slSLG~-~~~~~f~~~~~~~~~~~~~L~~gsl~vm~g~~r~~~-H 169 (194)
T PF13532_consen 98 QCLINYYRD-----GS-GIGPHSDDEEYGFGPPIASLSLGS-SRVFRFRNKSDDDEPIEVPLPPGSLLVMSGEARYDW-H 169 (194)
T ss_dssp EEEEEEESS-----TT--EEEE---TTC-CCSEEEEEEEES--EEEEEEECGGTS-EEEEEE-TTEEEEEETTHHHHE-E
T ss_pred EEEEEecCC-----CC-CcCCCCCcccccCCCcEEEEEEcc-CceEEEeeccCCCccEEEEcCCCCEEEeChHHhhhe-e
Confidence 467899976 33 78999987633 222211 111344432 689999999999999999987766 5
Q ss_pred Cc
Q 022712 287 WG 288 (293)
Q Consensus 287 G~ 288 (293)
|.
T Consensus 170 ~I 171 (194)
T PF13532_consen 170 GI 171 (194)
T ss_dssp EE
T ss_pred Ec
Confidence 54
No 40
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=53.42 E-value=7.5 Score=32.50 Aligned_cols=37 Identities=24% Similarity=0.270 Sum_probs=29.3
Q ss_pred CCcceEeCCCcccchHHHHHHHHHHHH-HcCeEEEEeCCC
Q 022712 63 FRIPVVDLKEVRFQRAEAVSGVLKAAE-EVGFFQVINHGV 101 (293)
Q Consensus 63 ~~iPvIDls~l~~~~~~~~~~l~~A~~-~~GFF~l~nHGi 101 (293)
..||+|+.... ......+.|.++++ +...+.+.|||+
T Consensus 122 ~~v~~~~~~~~--~~~~l~~~i~~~l~~~~~~vll~nHG~ 159 (184)
T PF00596_consen 122 GEVPVVPYAPP--GSEELAEAIAEALGEDRKAVLLRNHGV 159 (184)
T ss_dssp SCEEEE-THST--TCHHHHHHHHHHHTCTSSEEEETTTEE
T ss_pred ccceeeccccc--cchhhhhhhhhhhcCCceEEeecCCce
Confidence 56999998764 34556788999999 889999999996
No 41
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=52.41 E-value=16 Score=31.60 Aligned_cols=37 Identities=16% Similarity=0.262 Sum_probs=28.6
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVA 102 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~ 102 (293)
.||++.+... +..+.++.+.+++.+...+.+.|||+=
T Consensus 124 ~i~~~~y~~~--gs~~la~~v~~~l~~~~~vll~nHGv~ 160 (214)
T PRK06833 124 NVRCAEYATF--GTKELAENAFEAMEDRRAVLLANHGLL 160 (214)
T ss_pred CeeeccCCCC--ChHHHHHHHHHHhCcCCEEEECCCCCE
Confidence 4777766543 455677888999999999999999973
No 42
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=52.26 E-value=17 Score=31.44 Aligned_cols=37 Identities=19% Similarity=0.161 Sum_probs=29.3
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVA 102 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~ 102 (293)
.||++.+... +..+.++++.+++.+...+.+.|||+=
T Consensus 122 ~v~~~~y~~~--gs~~la~~~~~~l~~~~~vLl~nHGv~ 158 (215)
T PRK08087 122 SIPCAPYATF--GTRELSEHVALALKNRKATLLQHHGLI 158 (215)
T ss_pred CceeecCCCC--CCHHHHHHHHHHhCcCCEEEecCCCCE
Confidence 4888887654 445677888899988889999999973
No 43
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=48.86 E-value=19 Score=32.53 Aligned_cols=37 Identities=14% Similarity=0.082 Sum_probs=29.6
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVA 102 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~ 102 (293)
.||++.+... +..+.++.+.+++++...+.+.|||+=
T Consensus 179 ~i~vvpy~~p--gs~eLa~~v~~~l~~~~avLL~nHGvv 215 (274)
T PRK03634 179 GVGIVPWMVP--GTDEIGQATAEKMQKHDLVLWPKHGVF 215 (274)
T ss_pred ceeEecCCCC--CCHHHHHHHHHHhccCCEEEEcCCCCe
Confidence 4788877654 455778889999999999999999974
No 44
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=48.04 E-value=84 Score=28.99 Aligned_cols=17 Identities=12% Similarity=0.217 Sum_probs=12.3
Q ss_pred CC-CCHHHHHHHHHHHHH
Q 022712 99 HG-VATEVLVGMLEAARG 115 (293)
Q Consensus 99 HG-i~~~l~~~~~~~~~~ 115 (293)
|+ ++++..+.+++.++.
T Consensus 60 ~nfLs~~Ecd~Li~la~~ 77 (310)
T PLN00052 60 KGFLSDAECDHLVKLAKK 77 (310)
T ss_pred CCcCCHHHHHHHHHhccc
Confidence 44 677888888887765
No 45
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=47.75 E-value=28 Score=32.64 Aligned_cols=52 Identities=13% Similarity=0.190 Sum_probs=38.2
Q ss_pred CCCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhh
Q 022712 62 HFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFH 117 (293)
Q Consensus 62 ~~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF 117 (293)
...+|.||++.+. .....+.++.+++.++|+..+.+-.++.+. +.+.++.|-
T Consensus 107 ~~~~~~~d~~~~~-~~~~~~~~~~~~l~~~G~v~~rg~~~~~~~---~~~~~~~~G 158 (366)
T TIGR02409 107 ELSLPKFDHEAVM-KDDSVLLDWLSAVRDVGIAVLKGAPTKPGA---VEKLGKRIG 158 (366)
T ss_pred cccCCceeHHHHh-CCHHHHHHHHHHHHhccEEEEeCCCCCHHH---HHHHHHHhc
Confidence 3568999997764 345667899999999999999887776543 445555553
No 46
>PF06820 Phage_fiber_C: Putative prophage tail fibre C-terminus; InterPro: IPR009640 This entry represents the C terminus of phage 933W tail fibre protein. This domain is found together with conserved RLGP motif. The characteristics of the protein distribution suggest prophage matches.
Probab=46.37 E-value=14 Score=25.13 Aligned_cols=36 Identities=31% Similarity=0.288 Sum_probs=23.2
Q ss_pred ccccccccCC---ceEEEe-------cCCCCCcEEee-CCcEEEcCC
Q 022712 233 MGTTKHSDPD---FLTILL-------QDHMGGLQVFH-QNQWIDVPP 268 (293)
Q Consensus 233 ~g~~~HtD~~---~lTlL~-------qd~v~GLQV~~-~g~Wv~V~p 268 (293)
-|+-|-+|.. .||+|- |--+.-|||+. +|.|.+|+-
T Consensus 16 nG~~P~tdg~liT~ltfL~pkd~~~vq~~f~~LQv~fgDGpWqdikg 62 (64)
T PF06820_consen 16 NGWFPETDGRLITGLTFLDPKDATRVQGVFRHLQVRFGDGPWQDIKG 62 (64)
T ss_pred CccccCCCcceEeeeEEecccCchhheeeeeeeEEEeccCChhhccC
Confidence 4677778854 455652 22235689986 699998863
No 47
>PRK06755 hypothetical protein; Validated
Probab=46.27 E-value=20 Score=31.10 Aligned_cols=37 Identities=24% Similarity=0.208 Sum_probs=28.0
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVA 102 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~ 102 (293)
.||||++..- ......+.+.++.++...+.|.|||+-
T Consensus 136 ~IPiv~~~~~--~~~~la~~~~~~~~~~~avLl~~HGv~ 172 (209)
T PRK06755 136 TIPIVEDEKK--FADLLENNVPNFIEGGGVVLVHNYGMI 172 (209)
T ss_pred EEEEEeCCCc--hhHHHHHHHHhhccCCCEEEEcCCCeE
Confidence 5999987653 335566667777778889999999973
No 48
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=46.13 E-value=23 Score=30.60 Aligned_cols=36 Identities=19% Similarity=0.309 Sum_probs=27.8
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGV 101 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi 101 (293)
.||++.+... +..+.++.+.+++.+...+.|.|||+
T Consensus 121 ~i~~v~y~~~--gs~~la~~v~~~~~~~~~vLL~nHG~ 156 (214)
T TIGR01086 121 NIPCVPYATF--GSTKLASEVVAGILKSKAILLLHHGL 156 (214)
T ss_pred CccccCCCCC--ChHHHHHHHHHHhhhCCEEehhcCCC
Confidence 3677766654 34567788888888889999999996
No 49
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=44.29 E-value=20 Score=31.07 Aligned_cols=37 Identities=22% Similarity=0.265 Sum_probs=28.2
Q ss_pred CcceEeCCCcccchHHHHHHHHHHH--HHcCeEEEEeCCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAA--EEVGFFQVINHGVA 102 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~--~~~GFF~l~nHGi~ 102 (293)
.||++.+... ...+.++++.+++ .+...+.+.|||+-
T Consensus 130 ~ip~~~y~~~--g~~ela~~i~~~l~~~~~~~vll~nHG~~ 168 (221)
T PRK06557 130 PIPVGPFALI--GDEAIGKGIVETLKGGRSPAVLMQNHGVF 168 (221)
T ss_pred CeeccCCcCC--CcHHHHHHHHHHhCcCCCCEEEECCCCce
Confidence 5787776654 3456778888888 77788999999974
No 50
>PRK05834 hypothetical protein; Provisional
Probab=43.93 E-value=26 Score=29.85 Aligned_cols=38 Identities=24% Similarity=0.280 Sum_probs=25.8
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcC--eEEEEeCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVG--FFQVINHGV 101 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~G--FF~l~nHGi 101 (293)
.||++.+....+......+.+.+++++.. .+.|.|||+
T Consensus 121 ~ipv~~~~~~~~~~~~la~~v~~~l~~~~~~avLL~nHGv 160 (194)
T PRK05834 121 EISIYDPKDFDDWYERADTEILRYLQEKNKNFVVIKGYGV 160 (194)
T ss_pred eeeecCccccchHHHhHHHHHHHHHhhcCCCEEEEcCCcc
Confidence 47887655442112234577888888755 999999996
No 51
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=43.92 E-value=93 Score=25.93 Aligned_cols=57 Identities=19% Similarity=0.171 Sum_probs=35.9
Q ss_pred cceeeeecCCCCCCCCcccccccccCCce-------EEEecCCCCC-cEEe---eCCcEEEcCCCCCcEEEechhH
Q 022712 216 HCLLSNYYPACPQPELTMGTTKHSDPDFL-------TILLQDHMGG-LQVF---HQNQWIDVPPLSGAFVVNIGDL 280 (293)
Q Consensus 216 ~~lr~~~YPp~~~~~~~~g~~~HtD~~~l-------TlL~qd~v~G-LQV~---~~g~Wv~V~p~pga~vVNvGD~ 280 (293)
....+|+|++- -+++.|.|-.-+ .|-+ +... +.+. +++..+.+.-.+|.++|.-|+.
T Consensus 95 n~~LvN~Y~~G------d~mg~H~D~~e~~~~~pI~SvSL--G~~r~F~~~~~~~~~~~~~l~L~sGsllvM~G~s 162 (169)
T TIGR00568 95 DACLVNRYAPG------ATLSLHQDRDEPDLRAPLLSVSL--GLPAIFLIGGLKRNDPPKRLRLHSGDVVIMGGES 162 (169)
T ss_pred CEEEEEeecCC------CccccccccccccCCCCEEEEeC--CCCEEEEecCCcCCCceEEEEeCCCCEEEECCch
Confidence 35678999864 258899995222 1111 1111 2222 1356889999999999999974
No 52
>PRK06357 hypothetical protein; Provisional
Probab=43.65 E-value=33 Score=29.74 Aligned_cols=37 Identities=24% Similarity=0.354 Sum_probs=27.0
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHc------CeEEEEeCCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEV------GFFQVINHGVA 102 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~------GFF~l~nHGi~ 102 (293)
.||++.+... ...+.++.+.+++++. ..+.+.|||+=
T Consensus 130 ~i~~~p~~~~--gs~ela~~v~~~l~~~~~~~~~~~vLl~nHGvv 172 (216)
T PRK06357 130 KIPTLPFAPA--TSPELAEIVRKHLIELGDKAVPSAFLLNSHGIV 172 (216)
T ss_pred CcceecccCC--CcHHHHHHHHHHHhhcCcccCCCEEEECCCCCe
Confidence 4677776654 3467778888888765 48999999963
No 53
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=42.48 E-value=25 Score=31.72 Aligned_cols=37 Identities=11% Similarity=0.088 Sum_probs=30.1
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVA 102 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~ 102 (293)
.||++.+... +..+.++.+.+++++..-+.+.|||+=
T Consensus 177 ~i~vvp~~~p--Gs~eLA~~v~~~l~~~~avLL~nHGvv 213 (270)
T TIGR02624 177 GVGIIPWMVP--GTNEIGEATAEKMKEHRLVLWPHHGIF 213 (270)
T ss_pred ccccccCcCC--CCHHHHHHHHHHhccCCEEEEcCCCCe
Confidence 4788877654 556788899999999999999999973
No 54
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=41.35 E-value=33 Score=29.04 Aligned_cols=36 Identities=22% Similarity=0.249 Sum_probs=27.6
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHH---HcCeEEEEeCCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAE---EVGFFQVINHGVA 102 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~---~~GFF~l~nHGi~ 102 (293)
.||+++. .. +..+.++.+.++++ +...+.|.|||+=
T Consensus 126 ~vp~~~~-~~--gs~ela~~~~~~l~~~~~~~avll~nHGv~ 164 (193)
T TIGR03328 126 TIPIFEN-TQ--DIARLADSVAPYLEAYPDVPGVLIRGHGLY 164 (193)
T ss_pred EEeeecC-CC--ChHHHHHHHHHHHhcCCCCCEEEEcCCcce
Confidence 5899975 22 45677888999986 4789999999973
No 55
>PRK06661 hypothetical protein; Provisional
Probab=40.57 E-value=27 Score=30.64 Aligned_cols=38 Identities=13% Similarity=0.210 Sum_probs=27.6
Q ss_pred cceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCC
Q 022712 65 IPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVA 102 (293)
Q Consensus 65 iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~ 102 (293)
||..++........+..+.+.+++.+...+.|.|||+=
T Consensus 124 i~~~~~~~~~~~~~~~~~~~a~~l~~~~avll~nHG~v 161 (231)
T PRK06661 124 ISYHNYNSLALDADKQSSRLVNDLKQNYVMLLRNHGAI 161 (231)
T ss_pred ceecCCCccccCchhHHHHHHHHhCCCCEEEECCCCCe
Confidence 56655544321225667889999999999999999964
No 56
>PF01471 PG_binding_1: Putative peptidoglycan binding domain; InterPro: IPR002477 This entry represents peptidoglycan binding domain (PGBD), as well as related domains that share the same structure. PGBD may have a general peptidoglycan binding function, has a core structure consisting of a closed, three-helical bundle with a left-handed twist. It is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [, , ]. Examples are: Muramoyl-pentapeptide carboxypeptidase (3.4.17.8 from EC) N-acetylmuramoyl-L-alanine amidase cwlA precursor (cell wall hydrolase, autolysin, 3.5.1.28 from EC) Autolytic lysozyme (1,4-beta-N-acetylmuramidase, autolysin, 3.2.1.17 from EC) Membrane-bound lytic murein transglycosylase B Zinc-containing D-alanyl-D-alanine-cleaving carboxypeptidase, VanX []. Many of the proteins having this domain are as yet uncharacterised. However, some are known to belong to MEROPS peptidase family M15 (clan MD), subfamily M15A metallopeptidases. A number of the proteins belonging to subfamily M15A are non-peptidase homologues as they either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. Eukaryotic enzymes can contain structurally similar PGBD-like domains. Matrix metalloproteinases (MMP), which catalyse extracellular matrix degradation, have N-terminal domains that resemble PGBD. Examples are gelatinase A (MMP-2), which degrades type IV collagen [], stromelysin-1 (MMP-3), which plays a role in arthritis and tumour invasion [, ], and gelatinase B (MMP-9) secreted by neutrophils as part of the innate immune defence mechanism []. Several MMPs are implicated in cancer progression, since degradation of the extracellular matrix is an essential step in the cascade of metastasis [].; GO: 0008152 metabolic process; PDB: 1L6J_A 3BKH_A 3BKV_A 1GXD_A 1EAK_D 1CK7_A 1SLM_A 1LBU_A 1SU3_B.
Probab=38.64 E-value=35 Score=22.37 Aligned_cols=42 Identities=14% Similarity=0.215 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCC
Q 022712 79 EAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELP 120 (293)
Q Consensus 79 ~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP 120 (293)
..+..|...+...||....-.|+-...+.+++..-+.++.||
T Consensus 3 ~~v~~lq~~L~~~gy~~~~~~g~~~~~t~~Av~~fQ~~~gL~ 44 (57)
T PF01471_consen 3 PDVKALQQYLNRLGYYPGPVDGIFDPETREAVKAFQKANGLP 44 (57)
T ss_dssp HHHHHHHHHHHHTTTT-SSTTSBSHHHHHHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCcCHHHHHHHHHHHHHcCcC
Confidence 457889999999999955455666677777777777777765
No 57
>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed
Probab=36.78 E-value=34 Score=29.43 Aligned_cols=34 Identities=21% Similarity=0.420 Sum_probs=26.8
Q ss_pred CcceEe-CCCcccchHHHHHHHHHHHH-HcCeEEEEeCCC
Q 022712 64 RIPVVD-LKEVRFQRAEAVSGVLKAAE-EVGFFQVINHGV 101 (293)
Q Consensus 64 ~iPvID-ls~l~~~~~~~~~~l~~A~~-~~GFF~l~nHGi 101 (293)
.||+++ +. ..++.++.+.++++ +...+.+.|||+
T Consensus 137 ~vpv~~~~~----~~~eLa~~v~~~l~~~~~avLl~nHG~ 172 (208)
T PRK06754 137 HIPIIENHA----DIPTLAEEFAKHIQGDSGAVLIRNHGI 172 (208)
T ss_pred EEEEecCCC----CHHHHHHHHHHHhccCCcEEEECCCce
Confidence 488886 33 34578888999987 888999999996
No 58
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=36.53 E-value=48 Score=22.67 Aligned_cols=38 Identities=26% Similarity=0.401 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHcC--eEEEEe------CCCCHHHHHHHHHHHHH
Q 022712 78 AEAVSGVLKAAEEVG--FFQVIN------HGVATEVLVGMLEAARG 115 (293)
Q Consensus 78 ~~~~~~l~~A~~~~G--FF~l~n------HGi~~~l~~~~~~~~~~ 115 (293)
.+....|.+.++++| .+.++. |||+.+.++.+++..++
T Consensus 23 ~~~l~~la~ia~~yg~~~irlT~~Q~l~l~~v~~~~~~~i~~~L~~ 68 (69)
T PF03460_consen 23 AEQLRALAEIAEKYGDGEIRLTTRQNLQLRGVPEENLPAIFEELKE 68 (69)
T ss_dssp HHHHHHHHHHHHHHSTSEEEEETTSCEEEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEECCCCeEEEeCCCHHHHHHHHHHHHc
Confidence 356788888888887 666653 78999888888776554
No 59
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=36.41 E-value=26 Score=30.06 Aligned_cols=40 Identities=15% Similarity=0.020 Sum_probs=28.4
Q ss_pred CCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCC
Q 022712 63 FRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVA 102 (293)
Q Consensus 63 ~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~ 102 (293)
..||++++........+.++.+.+++.+.-.+.+.|||+=
T Consensus 121 ~~ip~~~~~~~~~~~~~la~~~~~~l~~~~~vll~nHG~~ 160 (209)
T cd00398 121 GDIPCTPYMTPETGEDEIGTQRALGFPNSKAVLLRNHGLF 160 (209)
T ss_pred CCeeecCCcCCCccHHHHHHHHhcCCCcCCEEEEcCCCCe
Confidence 3689998876421234556667777778889999999963
No 60
>PF02678 Pirin: Pirin; InterPro: IPR003829 This entry represents N-terminal domain of Pirin proteins from both eukaryotes and prokaryotes. The function of Pirin is unknown but the gene coding for this protein is known to be expressed in all tissues in the human body although it is expressed most strongly in the liver and heart. Pirin is known to be a nuclear protein, exclusively localised within the nucleoplasma and predominantly concentrated within dot-like subnuclear structures []. Pirin is composed of two structurally similar domains arranged face to face. The N-terminal domain additionally features four beta-strands, and the C-terminal domain also includes four additional -strands and a short alpha-helix. Although the two domains are similar, the C-terminal domain of Pirin differs from the N-terminal domain as it does not contain a metal binding site and its sequence does not contain the conserved metal-coordinating residues []. Pirin is confirmed to be a member of the cupin superfamily on the basis of primary sequence and structural similarity. The presence of a metal binding site in the N-terminal beta-barrel of Pirin, may be significant in its role in regulating NFI DNA replication and NF-kappaB transcription factor activity []. Pirin structure has been found to closely resemble members of the cupin superfamily. Pirin contains the two characteristic sequences of the cupin superfamily, namely PG-(X)5-HXH-(X)4-E-(X)6-G and G-(X)5-PXG-(X)2-H-(X)3-N separated by a variable stretch of 15-50 amino acids. These motifs are best conserved in the N-terminal where the conserved histidine and glutamic acid residues correspond to the metal-coordinating residues. The C-terminal domain motifs lack the metal binding residues normally associated with the cupin fold []. Pirin was identified to be a metal-binding protein [], and was found that the metal-binding residues of Pirins are highly conserved across mammals, plants, fungi, and prokaryotic organisms. Pirin acts as a cofactor for the transcription factor NFI, the regulatory mechanism of which is generally believed to require the assistance of a metal ion []. Structural data supports the hypothesis that the bound iron of Pirin may participate in this transcriptional regulation by enhancing and stabilising the formation of the p50,Bcl3,DNA complex []. Metals have been implicated directly or indirectly in the NF-kappaB family of transcription factors that control expression of a number of early response genes associated with inflammatory responses, cell growth, cell cycle progression, and neoplastic transformation []. However, most metal-dependent transcription factors are DNA-binding proteins that bind to specific sequences when the metal binds to the protein. Pirin, on the other hand, appears to function differently and bind to the transcription factor DNA complex [].; PDB: 2VEC_A 1J1L_A 3ACL_A 2P17_A 1TQ5_A.
Probab=35.15 E-value=45 Score=25.62 Aligned_cols=34 Identities=15% Similarity=0.287 Sum_probs=23.4
Q ss_pred cceeeeecCCCCC---C---CCcccccccccCCceEEEec
Q 022712 216 HCLLSNYYPACPQ---P---ELTMGTTKHSDPDFLTILLQ 249 (293)
Q Consensus 216 ~~lr~~~YPp~~~---~---~~~~g~~~HtD~~~lTlL~q 249 (293)
...-+.||-|... + ...++..||.+..+||++++
T Consensus 19 pF~f~d~~~p~~~~~g~d~i~~gf~~HPH~g~eivTyv~~ 58 (107)
T PF02678_consen 19 PFSFLDYFDPANMAFGPDYIGAGFPMHPHRGFEIVTYVLE 58 (107)
T ss_dssp TEEEEEEEETCECSETTEEETTEEEEEEECSEEEEEEEEE
T ss_pred ccCcccccCccccCCCccccCCCCCCcCCCCceEEEEEec
Confidence 3444566654332 2 35678899999999999996
No 61
>cd00379 Ribosomal_L10_P0 Ribosomal protein L10 family; composed of the large subunit ribosomal protein called L10 in bacteria, P0 in eukaryotes, and L10e in archaea, as well as uncharacterized P0-like eukaryotic proteins. In all three kingdoms, L10 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been sho
Probab=34.53 E-value=1.4e+02 Score=23.97 Aligned_cols=39 Identities=15% Similarity=0.232 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHHHcCeEEEEe-CCCCHHHHHHHHHHHHH
Q 022712 77 RAEAVSGVLKAAEEVGFFQVIN-HGVATEVLVGMLEAARG 115 (293)
Q Consensus 77 ~~~~~~~l~~A~~~~GFF~l~n-HGi~~~l~~~~~~~~~~ 115 (293)
....++++.+.++++.++++++ +|++...+.++....+.
T Consensus 3 K~~~v~~l~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~~ 42 (155)
T cd00379 3 KEELVEELKELLKKYKSVVVVDYRGLTVAQLTELRKELRE 42 (155)
T ss_pred hHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 3467788888888888888887 57888777776665544
No 62
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=33.11 E-value=1.4e+02 Score=26.72 Aligned_cols=41 Identities=20% Similarity=0.299 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHcCe--EEEEe-CCCCHHHHHHHHHHHHHhhC
Q 022712 78 AEAVSGVLKAAEEVGF--FQVIN-HGVATEVLVGMLEAARGFHE 118 (293)
Q Consensus 78 ~~~~~~l~~A~~~~GF--F~l~n-HGi~~~l~~~~~~~~~~FF~ 118 (293)
......+.+.+..+|| |.++| ||=....++.+.+..+..|.
T Consensus 89 ~~~~~~~~~Sl~~~Gfrk~v~vNgHGGN~~~l~~v~~el~~~~~ 132 (250)
T COG1402 89 IALLVELVESLARHGFRKFVIVNGHGGNSAALEIVARELRAELG 132 (250)
T ss_pred HHHHHHHHHHHHhcCccEEEEEecCCCcHHHHHHHHHHHHHhcc
Confidence 4567789999999999 77777 88777767666665555443
No 63
>PRK07490 hypothetical protein; Provisional
Probab=32.19 E-value=44 Score=29.58 Aligned_cols=36 Identities=17% Similarity=0.057 Sum_probs=26.8
Q ss_pred cceE-eCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCC
Q 022712 65 IPVV-DLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVA 102 (293)
Q Consensus 65 iPvI-Dls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~ 102 (293)
||++ ++... ...+..+.+.+++.+.-.+.|.|||+=
T Consensus 134 v~~~~~y~~~--~~~ela~~v~~~l~~~~avlL~nHG~v 170 (245)
T PRK07490 134 VAVDTLYGGM--ALEEEGERLAGLLGDKRRLLMGNHGVL 170 (245)
T ss_pred eeeccCCCCc--CcHHHHHHHHHHhCcCCEEEECCCCcE
Confidence 5654 44433 345778889999999999999999963
No 64
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=30.36 E-value=68 Score=29.22 Aligned_cols=29 Identities=28% Similarity=0.524 Sum_probs=25.0
Q ss_pred HHHHHHHcCeEEEEeCCCCHHHHHHHHHHHH
Q 022712 84 VLKAAEEVGFFQVINHGVATEVLVGMLEAAR 114 (293)
Q Consensus 84 l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~ 114 (293)
..+++++.|||.|.| +|..++..+.+...
T Consensus 17 Al~~lED~Gy~cvDN--lP~~Ll~~l~~~~~ 45 (284)
T PF03668_consen 17 ALRALEDLGYYCVDN--LPPSLLPQLIELLA 45 (284)
T ss_pred HHHHHHhcCeeEEcC--CcHHHHHHHHHHHH
Confidence 368999999999998 89999998887665
No 65
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=29.89 E-value=76 Score=29.76 Aligned_cols=52 Identities=19% Similarity=0.128 Sum_probs=37.3
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHE 118 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~ 118 (293)
.+|.+|+..+.+...+.+.++.+++.++|+..+.|-.++.+.. .+.++.|-.
T Consensus 100 ~~~~~~~~~~~~~~d~~l~~~l~~l~~~G~v~~~g~~~~~~~~---~~~a~riG~ 151 (362)
T TIGR02410 100 KDPSVHFKTTYDHTDSTLKSFSKNIYKYGFTFVDNVPVTPEAT---EKLCERISI 151 (362)
T ss_pred cCCceeHHHHhccCHHHHHHHHHHHHhhCEEEEcCCCCCHHHH---HHHHHHhcc
Confidence 4688888765422246788999999999999999988766543 455555543
No 66
>cd05796 Ribosomal_P0_like Ribosomal protein L10 family, P0-like protein subfamily; composed of uncharacterized eukaryotic proteins with similarity to the 60S ribosomal protein P0, including the Saccharomyces cerevisiae protein called mRNA turnover protein 4 (MRT4). MRT4 may be involved in mRNA decay. P0 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. It occupies the L7/L12 stalk of the ribosome. The stalk is known to contain the binding site for elongation factors EF-G and EF-Tu; however, there is disagreement as to whether or not P0 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, P0 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WAS
Probab=29.52 E-value=1.3e+02 Score=24.76 Aligned_cols=39 Identities=10% Similarity=0.238 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHHHcCeEEEEe-CCCCHHHHHHHHHHHHH
Q 022712 77 RAEAVSGVLKAAEEVGFFQVIN-HGVATEVLVGMLEAARG 115 (293)
Q Consensus 77 ~~~~~~~l~~A~~~~GFF~l~n-HGi~~~l~~~~~~~~~~ 115 (293)
....+++|.+.+.++-.++|++ +|++...++++.+..|.
T Consensus 3 K~~~v~~l~e~l~~y~~v~iv~~~gl~~~ql~~iR~~lr~ 42 (163)
T cd05796 3 KQKLVENIREAVDKYKYIYVFSVDNMRNNKLKDIRQEWKD 42 (163)
T ss_pred HHHHHHHHHHHHHhCCEEEEEEecCCCHHHHHHHHHHhcC
Confidence 3567899999999998887775 89999988888876654
No 67
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=29.24 E-value=1.3e+02 Score=26.17 Aligned_cols=58 Identities=28% Similarity=0.428 Sum_probs=39.2
Q ss_pred eee-eecCCCCCCCCcccccccccCCceEEEecCCCCCcEEee--CCcEEEcCCCCCcEEEechhH
Q 022712 218 LLS-NYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVFH--QNQWIDVPPLSGAFVVNIGDL 280 (293)
Q Consensus 218 lr~-~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd~v~GLQV~~--~g~Wv~V~p~pga~vVNvGD~ 280 (293)
+|. |+-|+.++++-...+..+ =..++|+..|-..+.. .|.=+.|||-=|+.++|+||-
T Consensus 92 ~~~~H~Hp~ade~E~y~vi~G~-----g~m~v~~~~G~~~v~~~~~Gd~iyVPp~~gH~t~N~Gd~ 152 (209)
T COG2140 92 MRELHYHPNADEPEIYYVLKGE-----GRMLVQKPEGEARVIAVRAGDVIYVPPGYGHYTINTGDE 152 (209)
T ss_pred ccccccCCCCCcccEEEEEecc-----EEEEEEcCCCcEEEEEecCCcEEEeCCCcceEeecCCCC
Confidence 444 444666666655555543 2345566655566643 589999999999999999983
No 68
>cd05795 Ribosomal_P0_L10e Ribosomal protein L10 family, P0 and L10e subfamily; composed of eukaryotic 60S ribosomal protein P0 and the archaeal P0 homolog, L10e. P0 or L10e forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WASP-interacting protein (WIP). These eukaryotic and archaeal P0 sequences have an additional C-terminal domain homologous with acidic proteins P1 and P2.
Probab=26.16 E-value=1.8e+02 Score=24.20 Aligned_cols=39 Identities=15% Similarity=0.233 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHHHcCeEEEEe-CCCCHHHHHHHHHHHHH
Q 022712 77 RAEAVSGVLKAAEEVGFFQVIN-HGVATEVLVGMLEAARG 115 (293)
Q Consensus 77 ~~~~~~~l~~A~~~~GFF~l~n-HGi~~~l~~~~~~~~~~ 115 (293)
....+++|.+.+.++-.++|++ .|++...++++.+..++
T Consensus 3 K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 42 (175)
T cd05795 3 KKEYVEKLTELLKSYPKVLIVDADNVGSKQLQKIRRSLRG 42 (175)
T ss_pred HHHHHHHHHHHHHhCCEEEEEEecCCChHHHHHHHHHhhC
Confidence 3567889999999998888876 78999888888777664
No 69
>PF11243 DUF3045: Protein of unknown function (DUF3045); InterPro: IPR021405 This entry is represented by Bacteriophage T4, Gp30.1; it is a family of uncharacterised viral proteins.
Probab=26.00 E-value=62 Score=23.43 Aligned_cols=21 Identities=24% Similarity=0.287 Sum_probs=17.8
Q ss_pred HHHHHHHHHcCeEEEEeCCCC
Q 022712 82 SGVLKAAEEVGFFQVINHGVA 102 (293)
Q Consensus 82 ~~l~~A~~~~GFF~l~nHGi~ 102 (293)
+.|..-|-+.||.||.-|-+.
T Consensus 36 ~~if~eCVeqGFiYVs~~~~~ 56 (89)
T PF11243_consen 36 EPIFKECVEQGFIYVSKYWMD 56 (89)
T ss_pred cHHHHHHHhcceEEEEeeeec
Confidence 468899999999999888665
No 70
>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional
Probab=25.17 E-value=92 Score=26.63 Aligned_cols=35 Identities=17% Similarity=0.265 Sum_probs=25.5
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcC---eEEEEeCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVG---FFQVINHGV 101 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~G---FF~l~nHGi 101 (293)
.||++.-.. ..++.++.+.+++++.. .+.|.|||+
T Consensus 134 ~vp~~~~~~---~~~eLa~~v~~~l~~~~~~~avlL~nHGv 171 (204)
T PRK09220 134 VVPIFDNDQ---DIARLAARVAPYLDAQPLRYGYLIRGHGL 171 (204)
T ss_pred EEeeecCCC---CHHHHHHHHHHHHHhCCCCcEEEECCCce
Confidence 466654321 34677888999999875 899999996
No 71
>PF01361 Tautomerase: Tautomerase enzyme; InterPro: IPR004370 4-Oxalocrotonate tautomerase (4-OT) catalyzes the isomerisation of beta,gamma-unsaturated enones to their alpha,beta-isomers. The enzyme is part of a plasmid-encoded pathway, which enables bacteria harbouring the plasmid to use various aromatic hydrocarbons as their sole sources of carbon and energy. The enzyme is a barrel-shaped hexamer, which can be viewed as a trimer of dimers. The hexamer contains a hydrophobic core formed by three beta-sheets and surrounded by three pairs of alpha-helices. Each 4-OT monomer of 62 amino acids has a relatively simple beta-alpha-beta fold as described by the structure of the enzyme from Pseudomonas putida []. The monomer begins with a conserved proline at the start of a beta-strand, followed by an alpha-helix and a 310 helix preceding a second parallel beta-strand, and ends with a beta-hairpin near the C terminus. The dimer results from antiparallel interactions between the beta-sheets and alpha-helices of the two monomers, forming a four-stranded beta-sheet with antiparallel alpha-helices on one side, creating two active sites, one at each end of the beta-sheet. Three dimers further associate to form a hexamer by the interactions of the strands of the C-terminal beta-hairpin loops with the edges of the four-stranded beta-sheets of neighbouring dimers, creating a series of cross-links that stabilise the hexamer Pro-1 of the mature protein functions as the general base while Arg-39 and an ordered water molecule each provide a hydrogen bond to the C-2 oxygen of substrate. Arg-39 plays an additional role in the binding of the C-1 carboxylate group. Arg-11 participates both in substrate binding and in catalysis. It interacts with the C-6 carboxylate group, thereby holding the substrate in place and drawing electron density to the C-5 position. The hydrophobic nature of the active site, which lowers the pKa of Pro-1 and provides a favourable environment for catalysis, is largely maintained by Phe-50. Because several Arg residues located near the active site are not conserved among all members of this family and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.; GO: 0016853 isomerase activity, 0006725 cellular aromatic compound metabolic process; PDB: 4OTA_H 4OTC_G 4OTB_J 2FM7_A 1BJP_B 1S0Y_K 3EJ9_E 3EJ7_K 3EJ3_I 3MB2_A ....
Probab=24.99 E-value=97 Score=20.45 Aligned_cols=24 Identities=25% Similarity=0.495 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhh
Q 022712 183 RQVHKLGTLLFELISEALGLKPDY 206 (293)
Q Consensus 183 ~~~~~l~~~ll~~la~~Lgl~~~~ 206 (293)
++.++|+..|..++++.||.+++.
T Consensus 14 e~K~~l~~~it~~~~~~lg~~~~~ 37 (60)
T PF01361_consen 14 EQKRELAEAITDAVVEVLGIPPER 37 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-GGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCe
Confidence 356788899999999999998764
No 72
>PRK01964 4-oxalocrotonate tautomerase; Provisional
Probab=24.24 E-value=1e+02 Score=20.75 Aligned_cols=25 Identities=20% Similarity=0.256 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhhh
Q 022712 183 RQVHKLGTLLFELISEALGLKPDYL 207 (293)
Q Consensus 183 ~~~~~l~~~ll~~la~~Lgl~~~~~ 207 (293)
++-++|...|.+++++.||++++.+
T Consensus 15 eqk~~l~~~it~~l~~~lg~p~~~v 39 (64)
T PRK01964 15 EKIKNLIREVTEAISATLDVPKERV 39 (64)
T ss_pred HHHHHHHHHHHHHHHHHhCcChhhE
Confidence 4557888899999999999997643
No 73
>COG1741 Pirin-related protein [General function prediction only]
Probab=24.18 E-value=1e+02 Score=28.02 Aligned_cols=36 Identities=22% Similarity=0.421 Sum_probs=25.4
Q ss_pred CCcccccccccCCceEEEec------CCCCCcEEeeCC--cEEE
Q 022712 230 ELTMGTTKHSDPDFLTILLQ------DHMGGLQVFHQN--QWID 265 (293)
Q Consensus 230 ~~~~g~~~HtD~~~lTlL~q------d~v~GLQV~~~g--~Wv~ 265 (293)
...++-.||.|..+||.+++ |..+..++...| +|..
T Consensus 54 G~~f~pHPHrg~etvTyvl~G~i~HrDS~Gn~~~i~pGdvqwMT 97 (276)
T COG1741 54 GRGFPPHPHRGLETVTYVLDGEIEHRDSLGNKGVIRPGDVQWMT 97 (276)
T ss_pred CCcCCCCCCCCcEEEEEEEccEEEEeecCCceeeecccceeEEc
Confidence 33466789999999999996 556666666554 3544
No 74
>PRK09553 tauD taurine dioxygenase; Reviewed
Probab=24.15 E-value=1.5e+02 Score=26.48 Aligned_cols=53 Identities=13% Similarity=0.107 Sum_probs=38.2
Q ss_pred CCCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCC
Q 022712 62 HFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHEL 119 (293)
Q Consensus 62 ~~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~L 119 (293)
.++|-=+||+... ..+..++|++|+.++|+..+.|-.++. ++..+.++.|-.+
T Consensus 13 Gaev~g~dl~~~l--~~~~~~~l~~~l~~~Gvlvfr~q~l~~---~~~~~~~~~~G~~ 65 (277)
T PRK09553 13 GAQISGIDLTRPL--SDNQFEQLYHALLRHQVLFFRDQPITP---QQQRDLAARFGDL 65 (277)
T ss_pred eeEEeCcccCCcC--CHHHHHHHHHHHHHCCEEEECCCCCCH---HHHHHHHHHhCCC
Confidence 3556667776531 345678999999999999999988875 4556666777554
No 75
>PF14549 P22_Cro: DNA-binding transcriptional regulator Cro; PDB: 1RZS_A 3BD1_A 3QWS_A 2HIN_B.
Probab=24.11 E-value=46 Score=22.73 Aligned_cols=11 Identities=0% Similarity=-0.133 Sum_probs=5.0
Q ss_pred HHHHHhCCccc
Q 022712 280 LLQASLYWGIS 290 (293)
Q Consensus 280 ~lq~~SnG~lk 290 (293)
.+|.+|||.++
T Consensus 40 ~Ie~~T~G~l~ 50 (60)
T PF14549_consen 40 QIEKLTNGKLK 50 (60)
T ss_dssp HHHHHTTTSS-
T ss_pred HHHHHhCCcee
Confidence 34455555554
No 76
>PRK02220 4-oxalocrotonate tautomerase; Provisional
Probab=23.44 E-value=1.1e+02 Score=20.23 Aligned_cols=25 Identities=16% Similarity=0.183 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhhh
Q 022712 183 RQVHKLGTLLFELISEALGLKPDYL 207 (293)
Q Consensus 183 ~~~~~l~~~ll~~la~~Lgl~~~~~ 207 (293)
++-++|...|.+.+++.+|++++.+
T Consensus 15 eqk~~l~~~it~~l~~~~~~p~~~v 39 (61)
T PRK02220 15 EQLKALVKDVTAAVSKNTGAPAEHI 39 (61)
T ss_pred HHHHHHHHHHHHHHHHHhCcChhhE
Confidence 3457888999999999999987643
No 77
>PRK04019 rplP0 acidic ribosomal protein P0; Validated
Probab=23.31 E-value=2e+02 Score=26.68 Aligned_cols=39 Identities=15% Similarity=0.308 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHHHHcCeEEEEe-CCCCHHHHHHHHHHHHH
Q 022712 77 RAEAVSGVLKAAEEVGFFQVIN-HGVATEVLVGMLEAARG 115 (293)
Q Consensus 77 ~~~~~~~l~~A~~~~GFF~l~n-HGi~~~l~~~~~~~~~~ 115 (293)
....+++|.+.++++.+++|++ +|++...++++.+..|.
T Consensus 8 K~~~v~el~~~l~~~~~v~iv~~~gl~~~ql~~lR~~lr~ 47 (330)
T PRK04019 8 KKEEVEELKELIKSYPVVGIVDLEGIPARQLQEIRRKLRG 47 (330)
T ss_pred HHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHHc
Confidence 3456677777777777777665 67777766666666553
No 78
>PF10055 DUF2292: Uncharacterized small protein (DUF2292); InterPro: IPR018743 Members of this family of hypothetical bacterial proteins have no known function.
Probab=22.82 E-value=61 Score=20.06 Aligned_cols=21 Identities=24% Similarity=0.181 Sum_probs=15.4
Q ss_pred ccCCceEEEecCCCCCcEEeeC
Q 022712 239 SDPDFLTILLQDHMGGLQVFHQ 260 (293)
Q Consensus 239 tD~~~lTlL~qd~v~GLQV~~~ 260 (293)
-++|.+||..||+.- .||.+.
T Consensus 13 i~yGsV~iiiqdG~v-vQIe~~ 33 (38)
T PF10055_consen 13 IRYGSVTIIIQDGRV-VQIEKT 33 (38)
T ss_pred CCcceEEEEEECCEE-EEEEhh
Confidence 358999999998743 566543
No 79
>COG0244 RplJ Ribosomal protein L10 [Translation, ribosomal structure and biogenesis]
Probab=22.78 E-value=2.6e+02 Score=23.38 Aligned_cols=40 Identities=15% Similarity=0.222 Sum_probs=31.5
Q ss_pred chHHHHHHHHHHHHHcCeEEEEe-CCCCHHHHHHHHHHHHH
Q 022712 76 QRAEAVSGVLKAAEEVGFFQVIN-HGVATEVLVGMLEAARG 115 (293)
Q Consensus 76 ~~~~~~~~l~~A~~~~GFF~l~n-HGi~~~l~~~~~~~~~~ 115 (293)
.....+++|.+.+++...|.+++ +|++...+.++.+..|+
T Consensus 7 ~K~~~v~el~e~~~~s~~~~i~dy~Gl~~~ql~~lR~~lr~ 47 (175)
T COG0244 7 WKKELVAELKELIKESPSVVIVDYRGLTVAQLTELRKKLRE 47 (175)
T ss_pred HHHHHHHHHHHHHhhCCEEEEEEeCCCcHHHHHHHHHHHHh
Confidence 34567888888888888777776 78998888888877775
No 80
>cd05797 Ribosomal_L10 Ribosomal protein L10 family, L10 subfamily; composed of bacterial 50S ribosomal protein and eukaryotic mitochondrial 39S ribosomal protein, L10. L10 occupies the L7/L12 stalk of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WASP-in
Probab=21.89 E-value=3e+02 Score=22.20 Aligned_cols=37 Identities=19% Similarity=0.243 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHcCeEEEEe-CCCCHHHHHHHHHHHH
Q 022712 78 AEAVSGVLKAAEEVGFFQVIN-HGVATEVLVGMLEAAR 114 (293)
Q Consensus 78 ~~~~~~l~~A~~~~GFF~l~n-HGi~~~l~~~~~~~~~ 114 (293)
...+++|.+.+++.-++++++ +|++.+.+.++....+
T Consensus 6 ~~~v~~l~~~l~~~~~v~v~~~~gl~~~~~~~lR~~lr 43 (157)
T cd05797 6 EEIVAELKEKLKEAKSVVVADYRGLTVAQLTELRKELR 43 (157)
T ss_pred HHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHH
Confidence 456677777777777666665 4677666666655554
No 81
>PRK00745 4-oxalocrotonate tautomerase; Provisional
Probab=21.66 E-value=1.3e+02 Score=19.91 Aligned_cols=25 Identities=28% Similarity=0.363 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhhh
Q 022712 183 RQVHKLGTLLFELISEALGLKPDYL 207 (293)
Q Consensus 183 ~~~~~l~~~ll~~la~~Lgl~~~~~ 207 (293)
++-++|+..|.+++++.+|.+++.+
T Consensus 15 eqk~~l~~~it~~l~~~~~~p~~~v 39 (62)
T PRK00745 15 EQKRKLVEEITRVTVETLGCPPESV 39 (62)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhHE
Confidence 3457888999999999999987653
No 82
>PRK07044 aldolase II superfamily protein; Provisional
Probab=21.54 E-value=1e+02 Score=27.35 Aligned_cols=38 Identities=13% Similarity=0.197 Sum_probs=27.1
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVA 102 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~ 102 (293)
.||++++..+. ...+..+.+.+++.+...+.|.|||+=
T Consensus 138 ~i~~~~y~~~~-~~~e~~~~va~~l~~~~avLL~nHGvi 175 (252)
T PRK07044 138 RLAYHDYEGIA-LDLDEGERLVADLGDKPAMLLRNHGLL 175 (252)
T ss_pred CceeeCCCCCc-CCHHHHHHHHHHhccCCEEEECCCCce
Confidence 47777765331 123456788888888899999999963
No 83
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=21.22 E-value=1.1e+02 Score=19.81 Aligned_cols=24 Identities=29% Similarity=0.232 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhh
Q 022712 183 RQVHKLGTLLFELISEALGLKPDY 206 (293)
Q Consensus 183 ~~~~~l~~~ll~~la~~Lgl~~~~ 206 (293)
++-++|+..|.+++++.+|.+++.
T Consensus 14 eqk~~l~~~i~~~l~~~~g~~~~~ 37 (58)
T cd00491 14 EQKRELIERVTEAVSEILGAPEAT 37 (58)
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 456788899999999999998653
No 84
>PF08823 PG_binding_2: Putative peptidoglycan binding domain; InterPro: IPR014927 This entry may be a peptidoglycan binding domain.
Probab=21.14 E-value=1.4e+02 Score=21.25 Aligned_cols=34 Identities=21% Similarity=0.326 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHH
Q 022712 78 AEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLE 111 (293)
Q Consensus 78 ~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~ 111 (293)
..+++.|.++++.+||.+=--||.-.+-.++++.
T Consensus 15 ~~~~~evq~~L~~lGyy~g~~~g~~d~a~~~Al~ 48 (74)
T PF08823_consen 15 GDVAREVQEALKRLGYYKGEADGVWDEATEDALR 48 (74)
T ss_pred HHHHHHHHHHHHHcCCccCCCCCcccHHHHHHHH
Confidence 4678999999999999887778877665555544
No 85
>PRK06486 hypothetical protein; Provisional
Probab=21.06 E-value=93 Score=27.83 Aligned_cols=26 Identities=23% Similarity=0.309 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHHHHcCeEEEEeCCCC
Q 022712 77 RAEAVSGVLKAAEEVGFFQVINHGVA 102 (293)
Q Consensus 77 ~~~~~~~l~~A~~~~GFF~l~nHGi~ 102 (293)
..+..+.+.+++.+...+.|.|||+=
T Consensus 161 s~ela~~va~al~~~~avLL~nHG~v 186 (262)
T PRK06486 161 DAAEGDRIARAMGDADIVFLKNHGVM 186 (262)
T ss_pred chhHHHHHHHHhCcCCEEEECCCCCe
Confidence 35678899999999999999999964
No 86
>PF00466 Ribosomal_L10: Ribosomal protein L10; InterPro: IPR001790 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. On the basis of sequence similarities the following prokaryotic and eukaryotic ribosomal proteins can be grouped: Bacterial 50S ribosomal protein L10; Archaebacterial acidic ribosomal protein P0 homologue (L10E); Eukaryotic 60S ribosomal protein P0 (L10E). This entry represents the ribosomal protein L10P family, with includes the above mentioned ribosomal proteins.; GO: 0042254 ribosome biogenesis, 0005622 intracellular; PDB: 3A1Y_G 3D5D_J 3PYT_I 3PYV_I 3D5B_J 3PYO_I 3PYR_I 3MS1_I 3MRZ_I 1VQ9_G ....
Probab=21.04 E-value=3.4e+02 Score=19.83 Aligned_cols=40 Identities=15% Similarity=0.272 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHHHHcCeEEEEe-CCCCHHHHHHHHHHHHHh
Q 022712 77 RAEAVSGVLKAAEEVGFFQVIN-HGVATEVLVGMLEAARGF 116 (293)
Q Consensus 77 ~~~~~~~l~~A~~~~GFF~l~n-HGi~~~l~~~~~~~~~~F 116 (293)
....+++|.+.+.++=.+.+++ +|++...+.++....+..
T Consensus 6 K~~~v~~~~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~~~ 46 (100)
T PF00466_consen 6 KEEIVEELKELLKKSKYVIVVDYNGLSANQLQELRKELRKK 46 (100)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 4567888999999886666665 789988888777766664
No 87
>PF01268 FTHFS: Formate--tetrahydrofolate ligase; InterPro: IPR000559 Formate--tetrahydrofolate ligase (6.3.4.3 from EC) (formyltetrahydrofolate synthetase) (FTHFS) is one of the enzymes participating in the transfer of one-carbon units, an essential element of various biosynthetic pathways. In many of these processes the transfers of one-carbon units are mediated by the coenzyme tetrahydrofolate (THF). In eukaryotes the FTHFS activity is expressed by a multifunctional enzyme, C-1-tetrahydrofolate synthase (C1-THF synthase), which also catalyses the dehydrogenase and cyclohydrolase activities. Two forms of C1-THF synthases are known [], one is located in the mitochondrial matrix, while the second one is cytoplasmic. In both forms the FTHFS domain consists of about 600 amino acid residues and is located in the C-terminal section of C1-THF synthase. In prokaryotes FTHFS activity is expressed by a monofunctional homotetrameric enzyme of about 560 amino acid residues []. The crystal structure of N(10)-formyltetrahydrofolate synthetase from Moorella thermoacetica shows that the subunit is composed of three domains organised around three mixed beta-sheets. There are two cavities between adjacent domains. One of them was identified as the nucleotide binding site by homology modelling. The large domain contains a seven-stranded beta-sheet surrounded by helices on both sides. The second domain contains a five-stranded beta-sheet with two alpha-helices packed on one side while the other two are a wall of the active site cavity. The third domain contains a four-stranded beta-sheet forming a half-barrel. The concave side is covered by two helices while the convex side is another wall of the large cavity. Arg 97 is likely involved in formyl phosphate binding. The tetrameric molecule is relatively flat with the shape of the letter X, and the active sites are located at the end of the subunits far from the subunit interface [].; GO: 0004329 formate-tetrahydrofolate ligase activity, 0005524 ATP binding, 0009396 folic acid-containing compound biosynthetic process; PDB: 2EO2_A 3DO6_B 1FPM_A 3RBO_A 3PZX_B 3QB6_A 1FP7_A 3SIN_B 1EG7_A 3QUS_A ....
Probab=20.91 E-value=95 Score=30.99 Aligned_cols=65 Identities=23% Similarity=0.313 Sum_probs=38.3
Q ss_pred CCcce-EeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCC------HHHHHHHHHHH--------HHhh--CCCHHHHh
Q 022712 63 FRIPV-VDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVA------TEVLVGMLEAA--------RGFH--ELPVEVKE 125 (293)
Q Consensus 63 ~~iPv-IDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~------~~l~~~~~~~~--------~~FF--~LP~eeK~ 125 (293)
..+|+ |=+..+.++.+++++.|++.|++.|+..++..... .+|.+.+.+++ +-.| ++|.++|.
T Consensus 370 fGvpvVVAIN~F~tDT~aEi~~I~~~~~~~Gv~~avs~~wa~GGeGa~eLA~~Vv~a~ee~~~~~fk~LY~l~~sI~eKI 449 (557)
T PF01268_consen 370 FGVPVVVAINRFPTDTDAEIELIRELCEELGVRAAVSEHWAKGGEGAVELAEAVVEACEEEEPSNFKPLYDLEDSIEEKI 449 (557)
T ss_dssp TT--EEEEEE--TTS-HHHHHHHHHHCCCCCEEEEEC-HHHHGGGGCHHHHHHHHHH-HHHS------SS-TTS-HHHHH
T ss_pred cCCCeEEEecCCCCCCHHHHHHHHHHHHhCCCCEEEechhhcccccHHHHHHHHHHHhhccCCCCcCcccCCcccHHHHH
Confidence 45665 45566655677889999999999998877753322 36777777776 1123 36777776
Q ss_pred hh
Q 022712 126 EY 127 (293)
Q Consensus 126 ~~ 127 (293)
+-
T Consensus 450 e~ 451 (557)
T PF01268_consen 450 ET 451 (557)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 88
>smart00460 TGc Transglutaminase/protease-like homologues. Transglutaminases are enzymes that establish covalent links between proteins. A subset of transglutaminase homologues appear to catalyse the reverse reaction, the hydrolysis of peptide bonds. Proteins with this domain are both extracellular and intracellular, and it is likely that the eukaryotic intracellular proteins are involved in signalling events.
Probab=20.91 E-value=81 Score=21.03 Aligned_cols=16 Identities=25% Similarity=0.713 Sum_probs=12.5
Q ss_pred cEEeeCCcEEEcCCCC
Q 022712 255 LQVFHQNQWIDVPPLS 270 (293)
Q Consensus 255 LQV~~~g~Wv~V~p~p 270 (293)
+||..+++|+.+.|.+
T Consensus 53 ~ev~~~~~W~~~D~~~ 68 (68)
T smart00460 53 AEVYLEGGWVPVDPTP 68 (68)
T ss_pred EEEEECCCeEEEeCCC
Confidence 6677778999998864
No 89
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=20.78 E-value=1.1e+02 Score=20.48 Aligned_cols=25 Identities=16% Similarity=0.165 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhhh
Q 022712 183 RQVHKLGTLLFELISEALGLKPDYL 207 (293)
Q Consensus 183 ~~~~~l~~~ll~~la~~Lgl~~~~~ 207 (293)
++-++|+..|.+++++.+|.+++.+
T Consensus 15 EqK~~L~~~it~a~~~~~~~p~~~v 39 (60)
T PRK02289 15 EQKNALAREVTEVVSRIAKAPKEAI 39 (60)
T ss_pred HHHHHHHHHHHHHHHHHhCcCcceE
Confidence 3457889999999999999987643
No 90
>PF00046 Homeobox: Homeobox domain not present here.; InterPro: IPR001356 The homeobox domain was first identified in a number of drosophila homeotic and segmentation proteins, but is now known to be well-conserved in many other animals, including vertebrates [, , ]. Hox genes encode homeodomain-containing transcriptional regulators that operate differential genetic programs along the anterior-posterior axis of animal bodies []. The domain binds DNA through a helix-turn-helix (HTH) structure. The HTH motif is characterised by two alpha-helices, which make intimate contacts with the DNA and are joined by a short turn. The second helix binds to DNA via a number of hydrogen bonds and hydrophobic interactions, which occur between specific side chains and the exposed bases and thymine methyl groups within the major groove of the DNA []. The first helix helps to stabilise the structure. The motif is very similar in sequence and structure in a wide range of DNA-binding proteins (e.g., cro and repressor proteins, homeotic proteins, etc.). One of the principal differences between HTH motifs in these different proteins arises from the stereo-chemical requirement for glycine in the turn which is needed to avoid steric interference of the beta-carbon with the main chain: for cro and repressor proteins the glycine appears to be mandatory, while for many of the homeotic and other DNA-binding proteins the requirement is relaxed.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2DA3_A 1LFB_A 2LFB_A 2ECB_A 2DA5_A 3D1N_O 3A03_A 2XSD_C 3CMY_A 1AHD_P ....
Probab=20.58 E-value=88 Score=20.30 Aligned_cols=38 Identities=18% Similarity=0.067 Sum_probs=30.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhh
Q 022712 174 CRDITLEYSRQVHKLGTLLFELISEALGLKPDYLLNME 211 (293)
Q Consensus 174 fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~ 211 (293)
-...+++++.........-...||..|||+...+...+
T Consensus 11 q~~~L~~~f~~~~~p~~~~~~~la~~l~l~~~~V~~WF 48 (57)
T PF00046_consen 11 QLKVLEEYFQENPYPSKEEREELAKELGLTERQVKNWF 48 (57)
T ss_dssp HHHHHHHHHHHSSSCHHHHHHHHHHHHTSSHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccccccccccccccccccCH
Confidence 45788888888777888888999999999987655443
No 91
>COG3113 Predicted NTP binding protein (contains STAS domain) [General function prediction only]
Probab=20.14 E-value=2e+02 Score=21.79 Aligned_cols=53 Identities=17% Similarity=0.131 Sum_probs=36.2
Q ss_pred CcceEeCCCcc---cchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCCHH
Q 022712 64 RIPVVDLKEVR---FQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVE 122 (293)
Q Consensus 64 ~iPvIDls~l~---~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~e 122 (293)
.+--||++.+. +.--...-.+.+-|+.-|. -+.-+|+|+.+.. -.+.|+++..
T Consensus 40 ~~~~idLs~v~rvDSaglALL~~~~~~~k~~g~-~~~L~~~p~~L~t-----La~Ly~l~~~ 95 (99)
T COG3113 40 DTVRIDLSGVSRVDSAGLALLLHLIRLAKKQGN-AVTLTGVPEQLRT-----LAELYNLSDW 95 (99)
T ss_pred CeEEEehhhcceechHHHHHHHHHHHHHHHcCC-eeEEecCcHHHHH-----HHHHhCcHhh
Confidence 45678888763 2344566778889999998 7788999987532 2345666543
Done!