Query 022712
Match_columns 293
No_of_seqs 283 out of 1983
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 09:56:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022712.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022712hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 3.2E-70 1.1E-74 508.7 25.3 266 22-293 3-287 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 9E-64 3.1E-68 458.0 23.9 231 61-293 3-247 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 3.4E-63 1.2E-67 455.0 21.4 224 63-293 2-233 (319)
4 1dcs_A Deacetoxycephalosporin 100.0 1.4E-61 4.8E-66 443.0 19.4 221 63-293 3-242 (311)
5 3on7_A Oxidoreductase, iron/as 100.0 6.1E-60 2.1E-64 426.1 21.2 217 63-293 2-230 (280)
6 1odm_A Isopenicillin N synthas 100.0 1.7E-59 5.9E-64 432.8 21.9 222 62-293 6-269 (331)
7 3dkq_A PKHD-type hydroxylase S 84.0 2.5 8.6E-05 36.3 6.9 57 217-279 100-173 (243)
8 3itq_A Prolyl 4-hydroxylase, a 75.8 7.3 0.00025 32.6 7.0 72 191-277 94-179 (216)
9 2jig_A Prolyl-4 hydroxylase; h 69.4 11 0.00037 31.4 6.7 15 263-277 170-184 (224)
10 3tht_A Alkylated DNA repair pr 66.3 10 0.00035 34.2 6.2 67 216-289 198-271 (345)
11 2dbn_A Hypothetical protein YB 63.5 4 0.00014 38.2 2.9 54 62-118 98-151 (461)
12 2opi_A L-fuculose-1-phosphate 55.0 4.8 0.00016 33.5 1.7 36 64-101 125-160 (212)
13 3o2g_A Gamma-butyrobetaine dio 54.6 8.5 0.00029 35.1 3.5 52 64-119 122-173 (388)
14 2iuw_A Alkylated repair protei 52.9 18 0.00063 30.6 5.1 66 217-288 127-211 (238)
15 2fk5_A Fuculose-1-phosphate al 51.8 8.2 0.00028 31.8 2.7 50 64-115 117-175 (200)
16 1e4c_P L-fuculose 1-phosphate 47.8 7.2 0.00025 32.4 1.7 36 64-101 122-157 (215)
17 1pvt_A Sugar-phosphate aldolas 45.2 9.6 0.00033 32.2 2.1 36 64-101 161-196 (238)
18 4ay7_A Methylcobalamin\: coenz 44.3 33 0.0011 30.4 5.7 43 76-118 302-348 (348)
19 2da7_A Zinc finger homeobox pr 42.8 9.4 0.00032 26.1 1.3 39 174-212 16-54 (71)
20 1m5a_B Insulin B chain; alpha 41.5 27 0.00091 19.6 2.8 18 78-95 9-26 (30)
21 2v9l_A Rhamnulose-1-phosphate 41.1 10 0.00035 32.9 1.6 36 64-101 179-214 (274)
22 2irp_A Putative aldolase class 41.1 14 0.00048 30.4 2.5 36 63-101 138-176 (208)
23 2hbt_A EGL nine homolog 1; pro 36.9 49 0.0017 28.0 5.3 161 80-279 15-190 (247)
24 2x4k_A 4-oxalocrotonate tautom 36.5 33 0.0011 21.5 3.4 24 184-207 18-41 (63)
25 1otj_A Alpha-ketoglutarate-dep 34.8 37 0.0013 29.0 4.3 51 62-117 15-65 (283)
26 3s57_A Alpha-ketoglutarate-dep 34.6 42 0.0015 27.5 4.4 65 217-287 101-183 (204)
27 3ocr_A Class II aldolase/adduc 34.2 17 0.00058 31.5 2.0 37 64-101 156-192 (273)
28 3i3q_A Alpha-ketoglutarate-dep 33.7 40 0.0014 27.9 4.1 61 217-285 106-176 (211)
29 3abf_A 4-oxalocrotonate tautom 33.1 43 0.0015 21.2 3.5 23 185-207 17-39 (64)
30 2ww6_A Fibritin, T4 fibritin; 31.7 34 0.0012 18.5 2.1 13 255-267 12-24 (27)
31 2opa_A Probable tautomerase YW 31.6 45 0.0015 20.9 3.4 23 184-206 15-37 (61)
32 1otf_A 4-oxalocrotonate tautom 31.1 46 0.0016 20.9 3.3 23 184-206 15-37 (62)
33 1oih_A Putative alkylsulfatase 29.7 49 0.0017 28.5 4.3 53 62-119 25-78 (301)
34 2do1_A Nuclear protein HCC-1; 27.9 63 0.0022 20.7 3.4 39 67-114 7-45 (55)
35 3ry0_A Putative tautomerase; o 25.6 66 0.0022 20.6 3.4 24 183-206 14-37 (65)
36 3m21_A Probable tautomerase HP 23.9 73 0.0025 20.6 3.4 23 184-206 18-40 (67)
37 3r1j_A Alpha-ketoglutarate-dep 23.6 82 0.0028 27.4 4.5 53 62-119 19-72 (301)
38 2p17_A Pirin-like protein; GK1 23.6 40 0.0014 29.2 2.4 30 217-249 39-68 (277)
39 3jsy_A Acidic ribosomal protei 23.5 1.3E+02 0.0044 24.8 5.5 39 77-115 5-44 (213)
40 2qt7_A Receptor-type tyrosine- 23.2 44 0.0015 23.9 2.1 32 189-220 19-51 (91)
41 3m20_A 4-oxalocrotonate tautom 23.1 62 0.0021 20.6 2.8 23 184-206 14-36 (62)
42 1gyx_A YDCE, B1461, hypothetic 22.4 78 0.0027 21.1 3.3 24 184-207 16-39 (76)
43 3mb2_A 4-oxalocrotonate tautom 22.2 79 0.0027 20.8 3.3 24 184-207 16-39 (72)
44 3m4r_A Uncharacterized protein 22.1 29 0.001 28.9 1.2 34 65-101 156-190 (222)
45 3pvj_A Alpha-ketoglutarate-dep 21.5 75 0.0026 27.2 3.8 51 62-117 13-63 (277)
46 2j01_J 50S ribosomal protein L 20.1 2.2E+02 0.0077 22.3 6.2 38 77-114 6-45 (173)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=3.2e-70 Score=508.73 Aligned_cols=266 Identities=30% Similarity=0.507 Sum_probs=233.1
Q ss_pred cccchHHHHhcCCCCCCCcccCCCCcccccccCCCCC---CC---CCCCcceEeCCCccc----chHHHHHHHHHHHHHc
Q 022712 22 SKAGVKGLVDAGITKVPGIFICSSEELDRDRQNSNEP---TR---THFRIPVVDLKEVRF----QRAEAVSGVLKAAEEV 91 (293)
Q Consensus 22 ~~~~v~~l~~~~~~~vP~~yv~p~~~~~~~~~~~~~~---~~---~~~~iPvIDls~l~~----~~~~~~~~l~~A~~~~ 91 (293)
+.++||+|+++++++||++|++|+++++. ... .. ...+||||||+.+.+ .+..++++|++||++|
T Consensus 3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~-----~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~ 77 (356)
T 1gp6_A 3 AVERVESLAKSGIISIPKEYIRPKEELES-----INDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDW 77 (356)
T ss_dssp CCCCHHHHHHTTCSSCCGGGSCCHHHHTT-----CCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHT
T ss_pred CcccHHHHHhcCCCCCCHHhcCCchhccc-----ccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhC
Confidence 35689999999999999999999988872 111 00 124699999999853 3567899999999999
Q ss_pred CeEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhcccc-CCccccccCccccccCCCCcccccccccCCC-----CC
Q 022712 92 GFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREV-NRKVKYGSNFDLYESSSANWRDTLFCVMGPE-----PL 165 (293)
Q Consensus 92 GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~-~~~~gY~~~~~~~~~~~~~~~e~~~~~~~p~-----~~ 165 (293)
|||||+||||+.++++++++.+++||+||.|+|+++..... ....||+........+..||+|.|.+...|. +.
T Consensus 78 GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~ 157 (356)
T 1gp6_A 78 GVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSI 157 (356)
T ss_dssp SEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGG
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCcccccccc
Confidence 99999999999999999999999999999999999865443 4568998766544566789999998876442 26
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhc---ccccceeeeecCCCCCCCCcccccccccCC
Q 022712 166 DPQELPFVCRDITLEYSRQVHKLGTLLFELISEALGLKPDYLLNMEC---AKGHCLLSNYYPACPQPELTMGTTKHSDPD 242 (293)
Q Consensus 166 ~p~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~---~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~ 242 (293)
||+. |+.||+++++|+++|.+|+.+||++|+++|||++++|.+.+. ...+.+|+||||||++++..+|+++|||+|
T Consensus 158 wP~~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g 236 (356)
T 1gp6_A 158 WPKT-PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVS 236 (356)
T ss_dssp SCCS-STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCS
T ss_pred CCCc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCC
Confidence 9964 567999999999999999999999999999999999998876 466789999999999999999999999999
Q ss_pred ceEEEecCCCCCcEEeeCCcEEEcCCCCCcEEEechhHHHHHhCCccccCC
Q 022712 243 FLTILLQDHMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQASLYWGISLTY 293 (293)
Q Consensus 243 ~lTlL~qd~v~GLQV~~~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT~ 293 (293)
+||||+||+++||||+++|+|++|+|+||+|||||||+||+||||+||||.
T Consensus 237 ~lTlL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~ 287 (356)
T 1gp6_A 237 ALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSIL 287 (356)
T ss_dssp SEEEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCC
T ss_pred eEEEEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccC
Confidence 999999999999999999999999999999999999999999999999984
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=9e-64 Score=457.95 Aligned_cols=231 Identities=20% Similarity=0.246 Sum_probs=200.1
Q ss_pred CCCCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCcccccc
Q 022712 61 THFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGS 140 (293)
Q Consensus 61 ~~~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~ 140 (293)
...+||||||+.+.+.+..++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++... ....+||..
T Consensus 3 ~~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~~Gy~~ 81 (312)
T 3oox_A 3 STSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGARGYIP 81 (312)
T ss_dssp -CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGTSEEEC
T ss_pred CCCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCcccccc
Confidence 3467999999988656778999999999999999999999999999999999999999999999997653 445678864
Q ss_pred Cccc--cccCCCCcccccccccC-----------CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhh
Q 022712 141 NFDL--YESSSANWRDTLFCVMG-----------PEPLDPQELPFVCRDITLEYSRQVHKLGTLLFELISEALGLKPDYL 207 (293)
Q Consensus 141 ~~~~--~~~~~~~~~e~~~~~~~-----------p~~~~p~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~ 207 (293)
.... ......||+|.|.+... +.+.||+. ++.||+++++|+++|.+|+.+||++|+++|||++++|
T Consensus 82 ~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~-~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f 160 (312)
T 3oox_A 82 FGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAE-IPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFF 160 (312)
T ss_dssp CCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTT-STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTT
T ss_pred ccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHH
Confidence 3221 12356899999877431 12379976 4569999999999999999999999999999999999
Q ss_pred hhhhcccccceeeeecCCCCCCCCcccccccccCCceEEEecCCCCCcEEe-eCCcEEEcCCCCCcEEEechhHHHHHhC
Q 022712 208 LNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQDHMGGLQVF-HQNQWIDVPPLSGAFVVNIGDLLQASLY 286 (293)
Q Consensus 208 ~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd~v~GLQV~-~~g~Wv~V~p~pga~vVNvGD~lq~~Sn 286 (293)
.+.+..+.+.+|+||||||++++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++||||||+||+|||
T Consensus 161 ~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tn 240 (312)
T 3oox_A 161 KPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTN 240 (312)
T ss_dssp HHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTT
T ss_pred HHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhC
Confidence 998877778899999999998766699999999999999999999999997 5799999999999999999999999999
Q ss_pred CccccCC
Q 022712 287 WGISLTY 293 (293)
Q Consensus 287 G~lkAT~ 293 (293)
|+||||.
T Consensus 241 G~~kS~~ 247 (312)
T 3oox_A 241 NVLPSTV 247 (312)
T ss_dssp TSSCCCC
T ss_pred CeecCCC
Confidence 9999984
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=3.4e-63 Score=454.97 Aligned_cols=224 Identities=29% Similarity=0.496 Sum_probs=199.4
Q ss_pred CCcceEeCCCccc-chHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccC
Q 022712 63 FRIPVVDLKEVRF-QRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSN 141 (293)
Q Consensus 63 ~~iPvIDls~l~~-~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~ 141 (293)
.+||||||+.+.. .+..++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++... ..||...
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~----~~Gy~~~ 77 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA----SKALEGV 77 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHTTC
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC----CCCCCcc
Confidence 3699999998853 5778999999999999999999999999999999999999999999999997532 2477643
Q ss_pred ccccccCCCCcccccccccCCC---CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhcc---cc
Q 022712 142 FDLYESSSANWRDTLFCVMGPE---PLDPQELPFVCRDITLEYSRQVHKLGTLLFELISEALGLKPDYLLNMECA---KG 215 (293)
Q Consensus 142 ~~~~~~~~~~~~e~~~~~~~p~---~~~p~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~---~~ 215 (293)
. .+.+..||+|.|.+...|. +.||+ .|+.||+++++|+++|.+|+.+||++|+++|||++++|.+.+.. ..
T Consensus 78 ~--~e~~~~d~ke~~~~~~~p~~~~~~wP~-~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~ 154 (319)
T 1w9y_A 78 Q--AEVTDMDWESTFFLKHLPISNISEVPD-LDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPN 154 (319)
T ss_dssp C--CCGGGCCCCEEEEEEEESCCGGGGCTT-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCE
T ss_pred c--ccCCCCChhhheeeecCCccccccccc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCcc
Confidence 2 2346789999998876553 27996 46779999999999999999999999999999999999987653 44
Q ss_pred cceeeeecCCCCCCCCcccccccccCCceEEEecC-CCCCcEEeeCCcEEEcCCCCCcEEEechhHHHHHhCCccccCC
Q 022712 216 HCLLSNYYPACPQPELTMGTTKHSDPDFLTILLQD-HMGGLQVFHQNQWIDVPPLSGAFVVNIGDLLQASLYWGISLTY 293 (293)
Q Consensus 216 ~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd-~v~GLQV~~~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT~ 293 (293)
+.+|+||||||++|+..+|+++|||+|+||||+|| +++||||+++|+|++|+|+||+|||||||+||+||||+||||.
T Consensus 155 ~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~ 233 (319)
T 1w9y_A 155 FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVM 233 (319)
T ss_dssp EEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCC
T ss_pred ceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeeccc
Confidence 68999999999999999999999999999999995 7999999999999999999999999999999999999999984
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.4e-61 Score=443.03 Aligned_cols=221 Identities=16% Similarity=0.145 Sum_probs=184.2
Q ss_pred CCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCC-HHHHhhhhccccCCccccccC
Q 022712 63 FRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELP-VEVKEEYYSREVNRKVKYGSN 141 (293)
Q Consensus 63 ~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP-~eeK~~~~~~~~~~~~gY~~~ 141 (293)
.+||||||+.+.+... .++|++||++||||||+||||+.++++++++++++||+|| .|+|+++........+||...
T Consensus 3 ~~iPvIDls~l~~~~~--~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~ 80 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLH--QDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGL 80 (311)
T ss_dssp CCCCEEEHHHHHTTCS--HHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC
T ss_pred CCCcEEEchhhcCCCH--HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeec
Confidence 4699999998753221 2399999999999999999999999999999999999999 999999875544556899764
Q ss_pred ccc------cccCCCCcccccccccCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHcCC----Chhhhhhhh
Q 022712 142 FDL------YESSSANWRDTLFCVMGPEPLDPQELPFVCRDITLEYSRQVHKLGTLLFELISEALGL----KPDYLLNME 211 (293)
Q Consensus 142 ~~~------~~~~~~~~~e~~~~~~~p~~~~p~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl----~~~~~~~~~ 211 (293)
... ...+..||+|.|.+...|+ .|| ++.||+.+++|+++|.+|+.+||++|+++||| ++++|.+.
T Consensus 81 ~~e~~~~~~~~~~~~d~~E~~~~~~~~n-~wP---~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~- 155 (311)
T 1dcs_A 81 ESESTAQITNTGSYSDYSMCYSMGTADN-LFP---SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDC- 155 (311)
T ss_dssp -----------------CEEEEECSSSC-CCS---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHSC-
T ss_pred cccccccccCCCCCCCcceeeeccCCCC-CCC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhhc-
Confidence 432 2246789999999987776 799 66799999999999999999999999999999 88888765
Q ss_pred cccccceeeeecCCCCCCC--C--cccccccccCCceEEEecC-CCCC---cEEeeCCcEEEcCCCCCcEEEechhHHHH
Q 022712 212 CAKGHCLLSNYYPACPQPE--L--TMGTTKHSDPDFLTILLQD-HMGG---LQVFHQNQWIDVPPLSGAFVVNIGDLLQA 283 (293)
Q Consensus 212 ~~~~~~lr~~~YPp~~~~~--~--~~g~~~HtD~~~lTlL~qd-~v~G---LQV~~~g~Wv~V~p~pga~vVNvGD~lq~ 283 (293)
.+.+|+||||||++++ . .+|+++|||+|+||||+|| +++| |||+++|+|++|+|+||+|||||||+||+
T Consensus 156 ---~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~~ 232 (311)
T 1dcs_A 156 ---EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIATL 232 (311)
T ss_dssp ---CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHHHH
T ss_pred ---chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHHHH
Confidence 5689999999999874 3 6889999999999999999 8999 99999999999999999999999999999
Q ss_pred HhCCccccCC
Q 022712 284 SLYWGISLTY 293 (293)
Q Consensus 284 ~SnG~lkAT~ 293 (293)
||||+||||.
T Consensus 233 ~TnG~~kS~~ 242 (311)
T 1dcs_A 233 VTGGQVKAPR 242 (311)
T ss_dssp HTTSCSCCCC
T ss_pred HhCCcccCCC
Confidence 9999999984
No 5
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=6.1e-60 Score=426.14 Aligned_cols=217 Identities=21% Similarity=0.287 Sum_probs=183.3
Q ss_pred CCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccCc
Q 022712 63 FRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNF 142 (293)
Q Consensus 63 ~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~~ 142 (293)
++||||||+.. ..+++|.+||++||||||+||||+.++++++++++++||+| |+|+++.. .+....||....
T Consensus 2 ~~IPvIDls~~-----~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~-~~~~~~GY~~~~ 73 (280)
T 3on7_A 2 MKLETIDYRAA-----DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMF-NRETHDGFFPAS 73 (280)
T ss_dssp --CCEEETTST-----THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBC-CTTTCCEEECCC
T ss_pred CCCCEEECCCh-----hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhcc-CCCCCCccccCc
Confidence 46999999875 35799999999999999999999999999999999999998 79999653 345578997543
Q ss_pred -c--ccccCCCCcccccccccCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCh--hh---hhhhhccc
Q 022712 143 -D--LYESSSANWRDTLFCVMGPEPLDPQELPFVCRDITLEYSRQVHKLGTLLFELISEALGLKP--DY---LLNMECAK 214 (293)
Q Consensus 143 -~--~~~~~~~~~~e~~~~~~~p~~~~p~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~--~~---~~~~~~~~ 214 (293)
. .......||+|.|.+. +||. .|+.||+++++|+++|.+|+.+||++|+++||++. ++ |.+.+...
T Consensus 74 ~~e~~~~~~~~D~kE~~~~~-----p~~~-~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~ 147 (280)
T 3on7_A 74 ISETAKGHTVKDIKEYYHVY-----PWGR-IPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANS 147 (280)
T ss_dssp --------CCCCSCEEEEEC-----TTSC-CCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTC
T ss_pred cccccCCCCcccHHHHHhcC-----CCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCC
Confidence 1 1123467999998764 5774 57789999999999999999999999999999863 22 44444444
Q ss_pred c-cceeeeecCCCCCCC--CcccccccccCCceEEEecCCCCCcEEe-eCCcEEEcCCCCCcEEEechhHHHHHhCCccc
Q 022712 215 G-HCLLSNYYPACPQPE--LTMGTTKHSDPDFLTILLQDHMGGLQVF-HQNQWIDVPPLSGAFVVNIGDLLQASLYWGIS 290 (293)
Q Consensus 215 ~-~~lr~~~YPp~~~~~--~~~g~~~HtD~~~lTlL~qd~v~GLQV~-~~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lk 290 (293)
. +.+|+||||||+.++ ..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++||||||+||+||||+||
T Consensus 148 ~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~k 227 (280)
T 3on7_A 148 HKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFP 227 (280)
T ss_dssp SSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSC
T ss_pred ccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCccc
Confidence 3 789999999999775 5799999999999999999999999999 47999999999999999999999999999999
Q ss_pred cCC
Q 022712 291 LTY 293 (293)
Q Consensus 291 AT~ 293 (293)
||.
T Consensus 228 S~~ 230 (280)
T 3on7_A 228 STS 230 (280)
T ss_dssp CCC
T ss_pred CCC
Confidence 984
No 6
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=1.7e-59 Score=432.78 Aligned_cols=222 Identities=16% Similarity=0.206 Sum_probs=193.2
Q ss_pred CCCcceEeCCCccc----chHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHh-hCCCHHHHhhhhccccCCcc
Q 022712 62 HFRIPVVDLKEVRF----QRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGF-HELPVEVKEEYYSREVNRKV 136 (293)
Q Consensus 62 ~~~iPvIDls~l~~----~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~F-F~LP~eeK~~~~~~~~~~~~ 136 (293)
..+||||||+.+.+ .+..++++|++||++||||||+|||| +++++++.+++| |+||.|+|+++.. +
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~------~ 76 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI------R 76 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC------T
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh------c
Confidence 35799999999843 45678999999999999999999999 999999999999 9999999999753 4
Q ss_pred ccccCcc--ccc------cCCCCcccccccccCC---------------CCCCCCC-CCchhhHHHHHHHHHHHHHHHHH
Q 022712 137 KYGSNFD--LYE------SSSANWRDTLFCVMGP---------------EPLDPQE-LPFVCRDITLEYSRQVHKLGTLL 192 (293)
Q Consensus 137 gY~~~~~--~~~------~~~~~~~e~~~~~~~p---------------~~~~p~~-~p~~fr~~~~~y~~~~~~l~~~l 192 (293)
||..... ... .+..||+|.|.+...+ .+.||+. .++.||+++++|+++|.+|+.+|
T Consensus 77 Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~l 156 (331)
T 1odm_A 77 AYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSAL 156 (331)
T ss_dssp TTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 5543221 111 2567999999876421 2379964 14569999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhhhccccccee--eeecC------C---CCCCCC-cccccccccCCceEEEecCCCCCcEEe-e
Q 022712 193 FELISEALGLKPDYLLNMECAKGHCLL--SNYYP------A---CPQPEL-TMGTTKHSDPDFLTILLQDHMGGLQVF-H 259 (293)
Q Consensus 193 l~~la~~Lgl~~~~~~~~~~~~~~~lr--~~~YP------p---~~~~~~-~~g~~~HtD~~~lTlL~qd~v~GLQV~-~ 259 (293)
|++|+++|||++++|.+.+....+.+| +|||| | |++|+. .+|+++|||+|+||||+||+++||||+ +
T Consensus 157 l~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~ 236 (331)
T 1odm_A 157 LKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVETA 236 (331)
T ss_dssp HHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEET
T ss_pred HHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEcC
Confidence 999999999999999998877778899 99999 8 988887 899999999999999999999999999 5
Q ss_pred CCcEEEcCCCCCcEEEechhHHHHHhCCccccCC
Q 022712 260 QNQWIDVPPLSGAFVVNIGDLLQASLYWGISLTY 293 (293)
Q Consensus 260 ~g~Wv~V~p~pga~vVNvGD~lq~~SnG~lkAT~ 293 (293)
+| |++|+|+||+|||||||+||+||||+||||.
T Consensus 237 ~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~ 269 (331)
T 1odm_A 237 AG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPI 269 (331)
T ss_dssp TE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCC
T ss_pred CC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCC
Confidence 68 9999999999999999999999999999984
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=83.95 E-value=2.5 Score=36.26 Aligned_cols=57 Identities=19% Similarity=0.113 Sum_probs=36.3
Q ss_pred ceeeeecCCCCCCCCcccccccccCC-----------ceEEEec--C----CCCCcEEeeCCcEEEcCCCCCcEEEechh
Q 022712 217 CLLSNYYPACPQPELTMGTTKHSDPD-----------FLTILLQ--D----HMGGLQVFHQNQWIDVPPLSGAFVVNIGD 279 (293)
Q Consensus 217 ~lr~~~YPp~~~~~~~~g~~~HtD~~-----------~lTlL~q--d----~v~GLQV~~~g~Wv~V~p~pga~vVNvGD 279 (293)
.++++.|.+-. -..+|.|.. .+|+++. | +.|.|.+.....=..|+|..|.+|+.-.+
T Consensus 100 ~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s~ 173 (243)
T 3dkq_A 100 PPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPSS 173 (243)
T ss_dssp EEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEETT
T ss_pred cceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECCC
Confidence 47788886631 156677753 4566654 3 12446666554457899999999997553
No 8
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=75.79 E-value=7.3 Score=32.64 Aligned_cols=72 Identities=24% Similarity=0.211 Sum_probs=40.2
Q ss_pred HHHHHHHHHcCCChhhhhhhhcccccceeeeecCCCCCCCCcccccccccCC-----------ceEEEec--C-CCCCcE
Q 022712 191 LLFELISEALGLKPDYLLNMECAKGHCLLSNYYPACPQPELTMGTTKHSDPD-----------FLTILLQ--D-HMGGLQ 256 (293)
Q Consensus 191 ~ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~-----------~lTlL~q--d-~v~GLQ 256 (293)
+|.+-|+..+|++.+. .-.+++.+|.+... ..+|.|.. .+|+|+. | ..||=-
T Consensus 94 ~i~~Ri~~~~gl~~~~--------~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT 159 (216)
T 3itq_A 94 KIEKRISSIMNVPASH--------GEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGET 159 (216)
T ss_dssp HHHHHHHHHHTSCGGG--------BCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCE
T ss_pred HHHHHHHHhcCceecc--------ccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCcee
Confidence 3444444456776321 12466777755321 45677653 3787775 2 223322
Q ss_pred EeeCCcEEEcCCCCCcEEEec
Q 022712 257 VFHQNQWIDVPPLSGAFVVNI 277 (293)
Q Consensus 257 V~~~g~Wv~V~p~pga~vVNv 277 (293)
+..+ .=+.|+|..|.+|+.-
T Consensus 160 ~Fp~-~~~~V~P~~G~al~f~ 179 (216)
T 3itq_A 160 FFPK-LNLSVHPRKGMAVYFE 179 (216)
T ss_dssp EETT-TTEEECCCTTCEEEEE
T ss_pred EecC-CCCEEecCCCeEEEEe
Confidence 3322 2378999999988864
No 9
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=69.44 E-value=11 Score=31.38 Aligned_cols=15 Identities=20% Similarity=0.343 Sum_probs=12.7
Q ss_pred EEEcCCCCCcEEEec
Q 022712 263 WIDVPPLSGAFVVNI 277 (293)
Q Consensus 263 Wv~V~p~pga~vVNv 277 (293)
-+.|+|..|.+|+.-
T Consensus 170 ~~~V~P~~G~al~f~ 184 (224)
T 2jig_A 170 GLAVKPIKGDALMFY 184 (224)
T ss_dssp SEEECCCTTCEEEEE
T ss_pred ceEEecccCcEEEEE
Confidence 489999999998864
No 10
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=66.30 E-value=10 Score=34.16 Aligned_cols=67 Identities=15% Similarity=0.051 Sum_probs=45.1
Q ss_pred cceeeeecCCCCCCCCcccccccccCC------ceEEEecCCCCCcEEee-CCcEEEcCCCCCcEEEechhHHHHHhCCc
Q 022712 216 HCLLSNYYPACPQPELTMGTTKHSDPD------FLTILLQDHMGGLQVFH-QNQWIDVPPLSGAFVVNIGDLLQASLYWG 288 (293)
Q Consensus 216 ~~lr~~~YPp~~~~~~~~g~~~HtD~~------~lTlL~qd~v~GLQV~~-~g~Wv~V~p~pga~vVNvGD~lq~~SnG~ 288 (293)
....+|+|.+- -++++|.|-. +.||-+-. ..=+.+.. +|.++.+.-.+|+++|.-|+.=..|..|.
T Consensus 198 n~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG~-~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I 270 (345)
T 3tht_A 198 DQMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLGS-EIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGI 270 (345)
T ss_dssp SEEEEEEECTT------CCEEEECCCTTTBCSCEEEEEESS-CEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEE
T ss_pred CEEEEEEecCC------CCEeeccCCchhcCCeEEEEECCC-ceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccC
Confidence 35678999762 2788999874 33443311 12244443 36799999999999999999887776554
Q ss_pred c
Q 022712 289 I 289 (293)
Q Consensus 289 l 289 (293)
-
T Consensus 271 ~ 271 (345)
T 3tht_A 271 T 271 (345)
T ss_dssp C
T ss_pred C
Confidence 3
No 11
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=63.45 E-value=4 Score=38.22 Aligned_cols=54 Identities=11% Similarity=0.191 Sum_probs=40.4
Q ss_pred CCCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhC
Q 022712 62 HFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHE 118 (293)
Q Consensus 62 ~~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~ 118 (293)
..-||.||++.+.+ ..+.++.++..++.|++.|.|. ||.+......+...+|.+
T Consensus 98 ~~~iP~i~f~di~~--~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 98 DAVWPVLSYADIKA--GHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CCSSCEEEHHHHHH--TCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcC--CCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 45699999988742 1223566788899999988876 899888877777777753
No 12
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=54.97 E-value=4.8 Score=33.49 Aligned_cols=36 Identities=25% Similarity=0.309 Sum_probs=29.5
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGV 101 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi 101 (293)
.||++++... ...++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~--g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRP--GSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCT--TCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCC--CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 6999998765 34567788999998888899999996
No 13
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=54.61 E-value=8.5 Score=35.14 Aligned_cols=52 Identities=15% Similarity=0.252 Sum_probs=39.4
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHEL 119 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~L 119 (293)
++|-||++.+. ...+.+.++.+|+.++|+..+.|-.++.+ ...+.++.|=.+
T Consensus 122 ~~~~~~~~~~l-~~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVL-RYDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHH-HCHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHh-cCHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 68999998764 24567899999999999999999888754 344566666444
No 14
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=52.91 E-value=18 Score=30.55 Aligned_cols=66 Identities=15% Similarity=0.141 Sum_probs=42.1
Q ss_pred ceeeeecCCCCCCCCcccccccccC--------CceEEEecCCCCCcEEeeC-----------CcEEEcCCCCCcEEEec
Q 022712 217 CLLSNYYPACPQPELTMGTTKHSDP--------DFLTILLQDHMGGLQVFHQ-----------NQWIDVPPLSGAFVVNI 277 (293)
Q Consensus 217 ~lr~~~YPp~~~~~~~~g~~~HtD~--------~~lTlL~qd~v~GLQV~~~-----------g~Wv~V~p~pga~vVNv 277 (293)
...+|+|++-. -++++|.|- .+.||-+-.. .=+.+... +..+.+.-.+|+++|.-
T Consensus 127 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG~~-~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFGAT-RTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEESC-EEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECCCC-EEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 46789997632 267888884 2333333211 11333321 36889999999999999
Q ss_pred hhHHHHHhCCc
Q 022712 278 GDLLQASLYWG 288 (293)
Q Consensus 278 GD~lq~~SnG~ 288 (293)
|+.=..|..|.
T Consensus 201 G~~r~~w~H~I 211 (238)
T 2iuw_A 201 GATQADWQHRV 211 (238)
T ss_dssp ETHHHHEEEEE
T ss_pred hhhhCccEecC
Confidence 99877775443
No 15
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=51.76 E-value=8.2 Score=31.79 Aligned_cols=50 Identities=22% Similarity=0.193 Sum_probs=35.7
Q ss_pred CcceE-eCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCC--H------HHHHHHHHHHHH
Q 022712 64 RIPVV-DLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVA--T------EVLVGMLEAARG 115 (293)
Q Consensus 64 ~iPvI-Dls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~--~------~l~~~~~~~~~~ 115 (293)
.||++ ++... ...++++.+.+++.+.-.+.+.|||+= . +.+++++..+..
T Consensus 117 ~ip~~~~y~~~--g~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~ 175 (200)
T 2fk5_A 117 EVPVLAPKTVS--ATEEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTT 175 (200)
T ss_dssp CEEEECCSCCS--SSHHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CceEecCCCCC--CcHHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHH
Confidence 69999 77655 345677889999988889999999952 2 445555554443
No 16
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=47.83 E-value=7.2 Score=32.44 Aligned_cols=36 Identities=19% Similarity=0.173 Sum_probs=29.2
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGV 101 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi 101 (293)
.||++++... +..+.++.+.+++.+.-.+.+.|||+
T Consensus 122 ~ip~~~y~~~--g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATF--GTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCT--TCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCC--CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 6999998765 34467788899998888899999996
No 17
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=45.15 E-value=9.6 Score=32.19 Aligned_cols=36 Identities=22% Similarity=0.204 Sum_probs=29.4
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGV 101 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi 101 (293)
.||++++... ...++++++.+++++.-.+.+.|||+
T Consensus 161 ~v~~~~y~~~--g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 161 GISVVEFEKP--GSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp CCEEECCCST--TCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CceEecCCCC--CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 5999998755 34567788899998888899999996
No 18
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=44.32 E-value=33 Score=30.42 Aligned_cols=43 Identities=16% Similarity=0.044 Sum_probs=33.5
Q ss_pred chHHHHHHHHHHHHHcCeEEEEeCCCC----HHHHHHHHHHHHHhhC
Q 022712 76 QRAEAVSGVLKAAEEVGFFQVINHGVA----TEVLVGMLEAARGFHE 118 (293)
Q Consensus 76 ~~~~~~~~l~~A~~~~GFF~l~nHGi~----~~l~~~~~~~~~~FF~ 118 (293)
..+++.+++.+.++.-||..=.+|||+ .+-++.+.+++++|++
T Consensus 302 ~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 302 PVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 445666778888888888666679986 4779999999999985
No 19
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.77 E-value=9.4 Score=26.14 Aligned_cols=39 Identities=15% Similarity=0.063 Sum_probs=32.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhc
Q 022712 174 CRDITLEYSRQVHKLGTLLFELISEALGLKPDYLLNMEC 212 (293)
Q Consensus 174 fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~ 212 (293)
-+..++.|+..-.+-...-+..||+.+||+.+.+...|.
T Consensus 16 ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFq 54 (71)
T 2da7_A 16 HMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFE 54 (71)
T ss_dssp HHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence 467889999888888888899999999999987776553
No 20
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=41.45 E-value=27 Score=19.63 Aligned_cols=18 Identities=28% Similarity=0.453 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHcCeEE
Q 022712 78 AEAVSGVLKAAEEVGFFQ 95 (293)
Q Consensus 78 ~~~~~~l~~A~~~~GFF~ 95 (293)
...++.|.-.|.+-|||+
T Consensus 9 s~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFY 26 (30)
T ss_dssp HHHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHHhccCcccc
Confidence 467889999999999998
No 21
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=41.11 E-value=10 Score=32.89 Aligned_cols=36 Identities=8% Similarity=0.031 Sum_probs=29.7
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGV 101 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi 101 (293)
.||++++... +..++++.+.+++++.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~--g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVP--GTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCS--SSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCC--CCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 5999988654 44567888999999888999999996
No 22
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=41.09 E-value=14 Score=30.37 Aligned_cols=36 Identities=17% Similarity=0.191 Sum_probs=28.3
Q ss_pred CCcceEeCCCcccchHHHHHHHHHHHHHcC---eEEEEeCCC
Q 022712 63 FRIPVVDLKEVRFQRAEAVSGVLKAAEEVG---FFQVINHGV 101 (293)
Q Consensus 63 ~~iPvIDls~l~~~~~~~~~~l~~A~~~~G---FF~l~nHGi 101 (293)
..||+++.. . +..+.++.+.+++.+.+ .+.+.|||+
T Consensus 138 ~~vp~~~~~-~--g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 138 IKIPIFPNE-Q--NIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp CEEEEECCC-S--CHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred cceeeecCC-C--CHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 369999874 2 55677888999998875 788899996
No 23
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=36.92 E-value=49 Score=28.02 Aligned_cols=161 Identities=16% Similarity=0.161 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhhCCCHHHHhhhhccccCCccccccCccccccCCCCcccccccc
Q 022712 80 AVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFHELPVEVKEEYYSREVNRKVKYGSNFDLYESSSANWRDTLFCV 159 (293)
Q Consensus 80 ~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~gY~~~~~~~~~~~~~~~e~~~~~ 159 (293)
..+.|..++.+.|++.+. .-++++.++.+.+.++.+- +.-.+ +. ...|-. .. ....+.+..-..+
T Consensus 15 ~~~~i~~~L~~~g~~Vid-~fLs~ee~~~L~~~~~~~~-----~~g~~--~~--a~i~~~-~~----~~~~~iR~d~i~w 79 (247)
T 2hbt_A 15 ALEYIVPCMNKHGICVVD-DFLGKETGQQIGDEVRALH-----DTGKF--TD--GQLVSQ-KS----DSSKDIRGDKITW 79 (247)
T ss_dssp HHHTHHHHHHHTSEEEES-SSSCHHHHHHHHHHHHHHH-----HTTCS--CS--CCEEEC-CS----SSTTCEECCEEEE
T ss_pred hHHHHHHHhccCCEEEEC-CCCCHHHHHHHHHHHHhhh-----hcCCc--cc--cccccc-cc----cccccccccceee
Confidence 346788999999988754 4589999999988887642 00001 00 011100 00 0011111111111
Q ss_pred cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhhcccccceeeeecCCCCCCCCcccccccc
Q 022712 160 MGPEPLDPQELPFVCRDITLEYSRQVHKLGTLLFELISEALGLKPDYLLNMECAKGHCLLSNYYPACPQPELTMGTTKHS 239 (293)
Q Consensus 160 ~~p~~~~p~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~Ht 239 (293)
..+. .+. .+.+..|.+.|.++... +...||+.. .. ...-+.+..|++. .-...+|.
T Consensus 80 l~~~------~~~--~~~~~~l~~~i~~l~~~----ln~~lGl~~------i~-~~~e~~~~~Y~~~-----G~~y~~H~ 135 (247)
T 2hbt_A 80 IEGK------EPG--CETIGLLMSSMDDLIRH----CNGKLGSYK------IN-GRTKAMVACYPGN-----GTGYVRHV 135 (247)
T ss_dssp ECSC------STT--CHHHHHHHHHHHHHHHH----TTTTSTTCC------EE-EECCEEEEEECSS-----SCCEEEEC
T ss_pred eccc------ccc--hhHHHHHHHHHHHHHHH----HhhhcCccc------cc-ccceEEEEEecCC-----CCcccccc
Confidence 1111 111 12333455555444332 222233321 00 1123567788751 12367788
Q ss_pred cCC-----ceEEEec--CC------CCCcEEeeCC--cEEEcCCCCCcEEEechh
Q 022712 240 DPD-----FLTILLQ--DH------MGGLQVFHQN--QWIDVPPLSGAFVVNIGD 279 (293)
Q Consensus 240 D~~-----~lTlL~q--d~------v~GLQV~~~g--~Wv~V~p~pga~vVNvGD 279 (293)
|.. .+|+++. ++ .|.|.+...+ ....|.|..|.+|+.-.+
T Consensus 136 D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~ 190 (247)
T 2hbt_A 136 DNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSD 190 (247)
T ss_dssp SSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECS
T ss_pred cCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecC
Confidence 872 6888875 21 3446777654 678999999999998654
No 24
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=36.49 E-value=33 Score=21.46 Aligned_cols=24 Identities=13% Similarity=0.238 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhh
Q 022712 184 QVHKLGTLLFELISEALGLKPDYL 207 (293)
Q Consensus 184 ~~~~l~~~ll~~la~~Lgl~~~~~ 207 (293)
+-++|+..|.+++++.||.+++++
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v 41 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 356788899999999999998653
No 25
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=34.79 E-value=37 Score=28.96 Aligned_cols=51 Identities=12% Similarity=0.082 Sum_probs=37.1
Q ss_pred CCCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhh
Q 022712 62 HFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFH 117 (293)
Q Consensus 62 ~~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF 117 (293)
..+|+-||++... ..+..++|++++.++|+..+.+-.++.+. ..+.++.|=
T Consensus 15 Gaei~gvdl~~~l--~~~~~~~l~~~l~~~Gvv~frg~~~~~~~---~~~~~~~~G 65 (283)
T 1otj_A 15 GAQISGADLTRPL--SDNQFEQLYHAVLRHQVVFLRDQAITPQQ---QRALAQRFG 65 (283)
T ss_dssp CEEEESCCSSSCC--CHHHHHHHHHHHHHHSEEEECSCCCCHHH---HHHHHHTTS
T ss_pred eEEEECCCcCccC--CHHHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHhC
Confidence 4568888998742 23457899999999999999887776643 344555553
No 26
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=34.63 E-value=42 Score=27.51 Aligned_cols=65 Identities=12% Similarity=0.110 Sum_probs=40.9
Q ss_pred ceeeeecCCCCCCCCcccccccccCC--------ceEEEecCCCCCcEEeeC----------CcEEEcCCCCCcEEEech
Q 022712 217 CLLSNYYPACPQPELTMGTTKHSDPD--------FLTILLQDHMGGLQVFHQ----------NQWIDVPPLSGAFVVNIG 278 (293)
Q Consensus 217 ~lr~~~YPp~~~~~~~~g~~~HtD~~--------~lTlL~qd~v~GLQV~~~----------g~Wv~V~p~pga~vVNvG 278 (293)
...+|+|.+-. -+++.|.|-. +.+|-+-.. .=+.+.+. +..+.+.-.+|+++|.-|
T Consensus 101 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG~~-~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g 174 (204)
T 3s57_A 101 FVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFGAS-RDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNH 174 (204)
T ss_dssp EEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEESC-EEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEET
T ss_pred eeEEEEECCCC-----CcccceecChhhccCCCcEEEEECCCc-eEEEEEEcCCCccccccCCceEEEECCCCCEEEECc
Confidence 45689997632 2578888862 223333111 12344421 257888889999999999
Q ss_pred hHHHHHhCC
Q 022712 279 DLLQASLYW 287 (293)
Q Consensus 279 D~lq~~SnG 287 (293)
+.=..|..|
T Consensus 175 ~~q~~w~H~ 183 (204)
T 3s57_A 175 PTNTHWYHS 183 (204)
T ss_dssp THHHHEEEE
T ss_pred hhhheeEee
Confidence 987777544
No 27
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=34.19 E-value=17 Score=31.51 Aligned_cols=37 Identities=11% Similarity=0.200 Sum_probs=29.6
Q ss_pred CcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCC
Q 022712 64 RIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGV 101 (293)
Q Consensus 64 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi 101 (293)
.||++|+..+. ...++.+.|.+++.+.-.+.|.|||+
T Consensus 156 ~v~~~~y~~~~-~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGIA-LDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TEEEECCCCSS-CCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CEEEECCCCCC-CCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 58999987652 24566788889999999999999996
No 28
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=33.74 E-value=40 Score=27.93 Aligned_cols=61 Identities=18% Similarity=0.068 Sum_probs=39.0
Q ss_pred ceeeeecCCCCCCCCcccccccccC-----C--ceEEEecCCCCCcEEee---CCcEEEcCCCCCcEEEechhHHHHHh
Q 022712 217 CLLSNYYPACPQPELTMGTTKHSDP-----D--FLTILLQDHMGGLQVFH---QNQWIDVPPLSGAFVVNIGDLLQASL 285 (293)
Q Consensus 217 ~lr~~~YPp~~~~~~~~g~~~HtD~-----~--~lTlL~qd~v~GLQV~~---~g~Wv~V~p~pga~vVNvGD~lq~~S 285 (293)
...+|+|.+ .. ++++|.|- + ++||-+-.. .=+.+.+ .+..+.+.-.+|+++|.-|+.= .|-
T Consensus 106 ~~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSLG~~-~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~~ 176 (211)
T 3i3q_A 106 ACLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSLGLP-AIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LFY 176 (211)
T ss_dssp EEEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEEESC-EEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TCC
T ss_pred EEEEEEEcC-----CC-CcccccCCCccccCCCEEEEECCCC-eEEEEecccCCCceEEEECCCCCEEEECchHH-ceE
Confidence 467899976 23 78899982 2 334433211 1244433 2578889999999999998873 353
No 29
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=33.13 E-value=43 Score=21.19 Aligned_cols=23 Identities=26% Similarity=0.192 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHcCCChhhh
Q 022712 185 VHKLGTLLFELISEALGLKPDYL 207 (293)
Q Consensus 185 ~~~l~~~ll~~la~~Lgl~~~~~ 207 (293)
-+++...|.+++++.||.+++++
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v 39 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHHHhCCCcccE
Confidence 46788899999999999998754
No 30
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=31.71 E-value=34 Score=18.54 Aligned_cols=13 Identities=15% Similarity=0.332 Sum_probs=10.6
Q ss_pred cEEeeCCcEEEcC
Q 022712 255 LQVFHQNQWIDVP 267 (293)
Q Consensus 255 LQV~~~g~Wv~V~ 267 (293)
..|+++|.|+...
T Consensus 12 ~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 12 AYVRKFGEWVLLS 24 (27)
T ss_dssp EEEEETTEEEEGG
T ss_pred eeEEEcCeEEEcc
Confidence 5789999999764
No 31
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=31.64 E-value=45 Score=20.86 Aligned_cols=23 Identities=22% Similarity=0.213 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHcCCChhh
Q 022712 184 QVHKLGTLLFELISEALGLKPDY 206 (293)
Q Consensus 184 ~~~~l~~~ll~~la~~Lgl~~~~ 206 (293)
+-++|+..|.+++.+.||++++.
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~~ 37 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEEK 37 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCcCe
Confidence 44688899999999999999764
No 32
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=31.08 E-value=46 Score=20.85 Aligned_cols=23 Identities=17% Similarity=0.105 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHcCCChhh
Q 022712 184 QVHKLGTLLFELISEALGLKPDY 206 (293)
Q Consensus 184 ~~~~l~~~ll~~la~~Lgl~~~~ 206 (293)
+-++++..|.+++.+.||++++.
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~ 37 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLER 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 44688899999999999999764
No 33
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=29.72 E-value=49 Score=28.53 Aligned_cols=53 Identities=15% Similarity=-0.021 Sum_probs=38.0
Q ss_pred CCCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCC-CCHHHHHHHHHHHHHhhCC
Q 022712 62 HFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHG-VATEVLVGMLEAARGFHEL 119 (293)
Q Consensus 62 ~~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHG-i~~~l~~~~~~~~~~FF~L 119 (293)
..+|+-|||+... ..+..++|++++.++|+..+.+-. ++. +...+.++.|=.+
T Consensus 25 Gaei~gvdl~~~l--~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 25 GAEIRGVKLSPDL--DAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp CEEEESCCCCTTC--CHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred ceEEeCCCccccC--CHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 4567778888742 234578999999999999998877 775 4455666666443
No 34
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=27.86 E-value=63 Score=20.74 Aligned_cols=39 Identities=10% Similarity=0.238 Sum_probs=28.7
Q ss_pred eEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHH
Q 022712 67 VVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAAR 114 (293)
Q Consensus 67 vIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~ 114 (293)
++|++.+ .+.+|.+.|+.+| |.--|--.++++++.....
T Consensus 7 ~~~l~kl------kV~eLK~~L~~rG---L~~~G~KaeLieRL~~~l~ 45 (55)
T 2do1_A 7 GVELHKL------KLAELKQECLARG---LETKGIKQDLIHRLQAYLE 45 (55)
T ss_dssp CCCTTTS------CHHHHHHHHHHHT---CCCCSCHHHHHHHHHHHHH
T ss_pred ccCHHHC------cHHHHHHHHHHcC---CCCCCcHHHHHHHHHHHHh
Confidence 4567776 3788999999999 4456777788888776543
No 35
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=25.55 E-value=66 Score=20.62 Aligned_cols=24 Identities=29% Similarity=0.361 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhh
Q 022712 183 RQVHKLGTLLFELISEALGLKPDY 206 (293)
Q Consensus 183 ~~~~~l~~~ll~~la~~Lgl~~~~ 206 (293)
++-++|+..|.+++.+.||++++.
T Consensus 14 eqk~~L~~~it~~~~~~lg~p~~~ 37 (65)
T 3ry0_A 14 QEVAALGEALTAAAHETLGTPVEA 37 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 345688899999999999999764
No 36
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=23.92 E-value=73 Score=20.57 Aligned_cols=23 Identities=17% Similarity=0.111 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHcCCChhh
Q 022712 184 QVHKLGTLLFELISEALGLKPDY 206 (293)
Q Consensus 184 ~~~~l~~~ll~~la~~Lgl~~~~ 206 (293)
+-++|...|.+++++.||++++.
T Consensus 18 qK~~l~~~lt~~l~~~lg~p~~~ 40 (67)
T 3m21_A 18 QKQQLIEGVSDLMVKVLNKNKAS 40 (67)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHCcCccc
Confidence 45678888999999999998754
No 37
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=23.60 E-value=82 Score=27.38 Aligned_cols=53 Identities=17% Similarity=0.032 Sum_probs=38.3
Q ss_pred CCCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeC-CCCHHHHHHHHHHHHHhhCC
Q 022712 62 HFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINH-GVATEVLVGMLEAARGFHEL 119 (293)
Q Consensus 62 ~~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nH-Gi~~~l~~~~~~~~~~FF~L 119 (293)
..+|+=|||+... ..+..++|++|+.++|...+.|- .++.+ ...+.++.|=.+
T Consensus 19 Gaei~gvdl~~~L--~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 19 GARVDGVRLGGDL--DDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp CEEEESCCCSTTC--CHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred cceEeCCCccccC--CHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 4568888998421 34567899999999999999997 77775 334566666443
No 38
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=23.56 E-value=40 Score=29.17 Aligned_cols=30 Identities=17% Similarity=0.081 Sum_probs=21.6
Q ss_pred ceeeeecCCCCCCCCcccccccccCCceEEEec
Q 022712 217 CLLSNYYPACPQPELTMGTTKHSDPDFLTILLQ 249 (293)
Q Consensus 217 ~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~q 249 (293)
++.+++ -+ .+...++..||.++-++|++++
T Consensus 39 f~~ld~-~~--~~~~gf~~HPHrg~EtVTyvl~ 68 (277)
T 2p17_A 39 FLLLME-DI--FERGTFDVHPHRGIETVTYVIS 68 (277)
T ss_dssp EEEEEE-EE--ECTTCCCCEEECSEEEEEEEEE
T ss_pred EEEEec-CC--CCCCCCCCCCCCCcEEEEEEEE
Confidence 344555 22 3444678899999999999996
No 39
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=23.50 E-value=1.3e+02 Score=24.79 Aligned_cols=39 Identities=13% Similarity=0.176 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHHHHcCeEEEEe-CCCCHHHHHHHHHHHHH
Q 022712 77 RAEAVSGVLKAAEEVGFFQVIN-HGVATEVLVGMLEAARG 115 (293)
Q Consensus 77 ~~~~~~~l~~A~~~~GFF~l~n-HGi~~~l~~~~~~~~~~ 115 (293)
....+++|.+.+.++..++|++ +|++...++++.+..|+
T Consensus 5 K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 44 (213)
T 3jsy_A 5 KIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD 44 (213)
T ss_dssp HHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhC
Confidence 3456778888888887777776 67887777777666653
No 40
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=23.23 E-value=44 Score=23.92 Aligned_cols=32 Identities=16% Similarity=0.321 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHcCCChhhhhhh-hcccccceee
Q 022712 189 GTLLFELISEALGLKPDYLLNM-ECAKGHCLLS 220 (293)
Q Consensus 189 ~~~ll~~la~~Lgl~~~~~~~~-~~~~~~~lr~ 220 (293)
+.+|++.+++.|+++..+|.+. ...+.-.+|+
T Consensus 19 G~~l~~~la~ll~l~~~~Ft~i~V~g~aVTFrV 51 (91)
T 2qt7_A 19 GVKLLEILAEHVHMSSGSFINISVVGPALTFRI 51 (91)
T ss_dssp HHHHHHHHHHHHTSCGGGEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHhcCCccceeeeEeecceEEEEe
Confidence 6789999999999999999875 2333344555
No 41
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=23.12 E-value=62 Score=20.64 Aligned_cols=23 Identities=13% Similarity=0.179 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHcCCChhh
Q 022712 184 QVHKLGTLLFELISEALGLKPDY 206 (293)
Q Consensus 184 ~~~~l~~~ll~~la~~Lgl~~~~ 206 (293)
+-++|...|.+++++.||++++.
T Consensus 14 qK~~L~~~it~~~~~~lg~~~~~ 36 (62)
T 3m20_A 14 KKREFVERLTSVAAEIYGMDRSA 36 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHHHHHHHHhCcCcce
Confidence 44688899999999999998754
No 42
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=22.40 E-value=78 Score=21.10 Aligned_cols=24 Identities=21% Similarity=0.196 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhh
Q 022712 184 QVHKLGTLLFELISEALGLKPDYL 207 (293)
Q Consensus 184 ~~~~l~~~ll~~la~~Lgl~~~~~ 207 (293)
+-++|+..|.+++.+.||++++.+
T Consensus 16 qk~~L~~~l~~~l~~~lgip~~~v 39 (76)
T 1gyx_A 16 QKAALAADITDVIIRHLNSKDSSI 39 (76)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCCceE
Confidence 446888999999999999998743
No 43
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=22.15 E-value=79 Score=20.78 Aligned_cols=24 Identities=17% Similarity=0.099 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhh
Q 022712 184 QVHKLGTLLFELISEALGLKPDYL 207 (293)
Q Consensus 184 ~~~~l~~~ll~~la~~Lgl~~~~~ 207 (293)
+-++|...|.+++++.||.+++.+
T Consensus 16 qK~~L~~~it~~l~~~lg~p~~~v 39 (72)
T 3mb2_A 16 QKAELARALSAAAAAAFDVPLAEV 39 (72)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred HHHHHHHHHHHHHHHHhCCCcccE
Confidence 456888899999999999997643
No 44
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=22.15 E-value=29 Score=28.92 Aligned_cols=34 Identities=12% Similarity=0.087 Sum_probs=26.4
Q ss_pred cceEeCCCcccchHHHHHHHHHHHHHc-CeEEEEeCCC
Q 022712 65 IPVVDLKEVRFQRAEAVSGVLKAAEEV-GFFQVINHGV 101 (293)
Q Consensus 65 iPvIDls~l~~~~~~~~~~l~~A~~~~-GFF~l~nHGi 101 (293)
||++++... .- ++.++|.+++.+. -.+.|.|||+
T Consensus 156 v~~~~y~~~--g~-ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPP--GF-TLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCS--SH-HHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCC--cH-HHHHHHHHHHhcCCCEEEECCCCC
Confidence 888888765 33 6778889998764 6788999996
No 45
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=21.49 E-value=75 Score=27.19 Aligned_cols=51 Identities=18% Similarity=0.115 Sum_probs=37.7
Q ss_pred CCCcceEeCCCcccchHHHHHHHHHHHHHcCeEEEEeCCCCHHHHHHHHHHHHHhh
Q 022712 62 HFRIPVVDLKEVRFQRAEAVSGVLKAAEEVGFFQVINHGVATEVLVGMLEAARGFH 117 (293)
Q Consensus 62 ~~~iPvIDls~l~~~~~~~~~~l~~A~~~~GFF~l~nHGi~~~l~~~~~~~~~~FF 117 (293)
.++|.=|||+... ..+..++|++|+.++|...+.|-.++.+ +..+.++.|=
T Consensus 13 Gaei~gvdl~~~l--~~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG 63 (277)
T 3pvj_A 13 GAQISGVDISRDI--SAEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFG 63 (277)
T ss_dssp CEEEESCCTTSCC--CHHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGS
T ss_pred eEEEeCCCccccC--CHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 4578888998732 3456789999999999999999888764 3345566653
No 46
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=20.12 E-value=2.2e+02 Score=22.34 Aligned_cols=38 Identities=16% Similarity=0.270 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHHHHcC-eEEEEe-CCCCHHHHHHHHHHHH
Q 022712 77 RAEAVSGVLKAAEEVG-FFQVIN-HGVATEVLVGMLEAAR 114 (293)
Q Consensus 77 ~~~~~~~l~~A~~~~G-FF~l~n-HGi~~~l~~~~~~~~~ 114 (293)
....+++|.+.+++.. .++|++ +|++.+.+.++....+
T Consensus 6 K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr 45 (173)
T 2j01_J 6 NVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALK 45 (173)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 3456777777777777 666555 5777766666665554
Done!