BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022715
(293 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2GEZ|B Chain B, Crystal Structure Of Potassium-Independent Plant
Asparaginase
pdb|2GEZ|D Chain D, Crystal Structure Of Potassium-Independent Plant
Asparaginase
pdb|2GEZ|F Chain F, Crystal Structure Of Potassium-Independent Plant
Asparaginase
pdb|2GEZ|H Chain H, Crystal Structure Of Potassium-Independent Plant
Asparaginase
Length = 133
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/131 (69%), Positives = 104/131 (79%)
Query: 163 TVGCVVVDQEGRCAAATSTGGLMNKRTGRIGDSPLIGAGTYASNLCGVSCTGEGEAIIRA 222
TVGCV VD G A+ATSTGGL+NK GRIGD+PLIGAGTYA+ LC VS TG+GE IIRA
Sbjct: 1 TVGCVAVDSHGNLASATSTGGLVNKMVGRIGDTPLIGAGTYANELCAVSATGKGEEIIRA 60
Query: 223 TLARDVAAVMEYKGLCLQEAVDFVIKERLDEGQAGLIAVSKNGEVACGFNANGMFRGCAT 282
T+ARDVAA+ME+KGL L+EA DFVI ER +G GLIAVS GE+A FN GMFR CAT
Sbjct: 61 TVARDVAALMEFKGLSLKEAADFVIHERTPKGTVGLIAVSAAGEIAMPFNTTGMFRACAT 120
Query: 283 EDGFMEVGIWP 293
EDG+ E+ IWP
Sbjct: 121 EDGYSEIAIWP 131
>pdb|2ZAK|A Chain A, Orthorhombic Crystal Structure Of Precursor E. Coli
Isoaspartyl PeptidaseL-Asparaginase (Ecaiii) With
Active-Site T179a Mutation
pdb|2ZAK|B Chain B, Orthorhombic Crystal Structure Of Precursor E. Coli
Isoaspartyl PeptidaseL-Asparaginase (Ecaiii) With
Active-Site T179a Mutation
pdb|3C17|A Chain A, Hexagonal Crystal Structure Of Precursor E. Coli
Isoaspartyl Peptidase/l-asparaginase (ecaiii) With
Active-site T179a Mutation
pdb|3C17|B Chain B, Hexagonal Crystal Structure Of Precursor E. Coli
Isoaspartyl Peptidase/l-asparaginase (ecaiii) With
Active-site T179a Mutation
Length = 320
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/263 (42%), Positives = 150/263 (57%), Gaps = 25/263 (9%)
Query: 19 VRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEK 78
VR LE PLFN+G G+ T + T E++A +MDG + GAV+G++ ++NP+ ARLVME+
Sbjct: 56 VRLLEECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQ 115
Query: 79 SPHSYLAFSGAEEFARQQGVELFDNEYFITEENVGMLKLAKEANSILFDYRIPNGGFETC 138
SPH + GAE FA +G+E E F T L A++ + + D+
Sbjct: 116 SPHVMMIGEGAENFAFARGMERVSPEIFSTSLRYEQLLAARKEGATVLDHS--------- 166
Query: 139 SAGAAATDSPLQMNGLPISLYAPETVGCVVVDQEGRCAAATSTGGLMNKRTGRIGDSPLI 198
A D +M VG V +D +G AAATSTGG+ NK GR+GDSPL+
Sbjct: 167 ---GAPLDEKQKMG----------AVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLV 213
Query: 199 GAGTYASNL-CGVSCTGEGEAIIRATLARDVAAVMEYKGLCLQEAVDFVIKERLDE--GQ 255
GAG YA+N VSCTG GE IRA A D+AA+M+Y GL L EA + V+ E+L G
Sbjct: 214 GAGCYANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAEACERVVMEKLPALGGS 273
Query: 256 AGLIAVSKNGEVACGFNANGMFR 278
GLIA+ G VA FN GM+R
Sbjct: 274 GGLIAIDHEGNVALPFNTEGMYR 296
>pdb|4ET0|A Chain A, Crystal Structure Of Circularly Permuted Human
Asparaginase-Like Protein 1
pdb|4ET0|B Chain B, Crystal Structure Of Circularly Permuted Human
Asparaginase-Like Protein 1
Length = 327
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/279 (43%), Positives = 152/279 (54%), Gaps = 28/279 (10%)
Query: 19 VRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEK 78
V LE DP FN+G GS L NG VEM+ASIMDG GAVS + + NPI LARLVMEK
Sbjct: 52 VVALEDDPEFNAGCGSVLNTNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLARLVMEK 111
Query: 79 SPHSYLAFSGAEEFARQQGVELFDNEYFITEENVGMLKLAKEANSILFDYRIPNGGFETC 138
+PH +L GA +FA GV E +TE N +L KE +
Sbjct: 112 TPHCFLTDQGAAQFAAAMGVPEIPGEKLVTERN--KKRLEKEKH---------------- 153
Query: 139 SAGAAATDSPLQMNGLPISLYAPETVGCVVVDQEGRCAAATSTGGLMNKRTGRIGDSPLI 198
GA TD Q N L + TVG V +D +G A ATSTGG++NK GR+GDSP +
Sbjct: 154 EKGAQKTD--CQKN-LGHHHHHHMTVGAVALDCKGNVAYATSTGGIVNKMVGRVGDSPCL 210
Query: 199 GAGTYASNLCG-VSCTGEGEAIIRATLARDVAAVMEYKGLCLQEAVDF---VIKERLDEG 254
GAG YA N G VS TG GE+I++ LAR +E +G ++EA D +K R+ +G
Sbjct: 211 GAGGYADNDIGAVSTTGHGESILKVNLARLTLFHIE-QGKTVEEAADLSLGYMKSRV-KG 268
Query: 255 QAGLIAVSKNGEVACGFNANGMFRGCATEDGFMEVGIWP 293
GLI VSK G+ + + M A +DG + GI P
Sbjct: 269 LGGLIVVSKTGDWVAKWTSTSMPW-AAAKDGKLHFGIDP 306
>pdb|4GDT|A Chain A, Crystal Structure Of Malonate-Bound Human L-Asparaginase
Protein
pdb|4GDT|B Chain B, Crystal Structure Of Malonate-Bound Human L-Asparaginase
Protein
pdb|4GDU|A Chain A, Crystal Structure Of Sulfate-Bound Human L-Asparaginase
Protein
pdb|4GDU|B Chain B, Crystal Structure Of Sulfate-Bound Human L-Asparaginase
Protein
pdb|4GDV|A Chain A, Crystal Structure Of Partially-Cleaved Human
L-Asparaginase Protein In Complex With L-Aspartate
pdb|4GDV|B Chain B, Crystal Structure Of Partially-Cleaved Human
L-Asparaginase Protein In Complex With L-Aspartate
pdb|4GDW|A Chain A, Crystal Structure Of Fully-Cleaved Human L-Asparaginase
Protein In Complex With L-Aspartate
pdb|4GDW|B Chain B, Crystal Structure Of Fully-Cleaved Human L-Asparaginase
Protein In Complex With L-Aspartate
Length = 310
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/279 (41%), Positives = 149/279 (53%), Gaps = 35/279 (12%)
Query: 19 VRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEK 78
V LE DP FN+G GS L NG VEM+ASIMDG GAVS + + NPI LARLVMEK
Sbjct: 54 VVALEDDPEFNAGCGSVLNTNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLARLVMEK 113
Query: 79 SPHSYLAFSGAEEFARQQGVELFDNEYFITEENVGMLKLAKEANSILFDYRIPNGGFETC 138
+PH +L GA +FA GV E +TE N +L KE +
Sbjct: 114 TPHCFLTDQGAAQFAAAMGVPEIPGEKLVTERN--KKRLEKEKH---------------- 155
Query: 139 SAGAAATDSPLQMNGLPISLYAPETVGCVVVDQEGRCAAATSTGGLMNKRTGRIGDSPLI 198
GA TD + TVG V +D +G A ATSTGG++NK GR+GDSP +
Sbjct: 156 EKGAQKTDCQKNLG----------TVGAVALDCKGNVAYATSTGGIVNKMVGRVGDSPCL 205
Query: 199 GAGTYASNLCG-VSCTGEGEAIIRATLARDVAAVMEYKGLCLQEAVDF---VIKERLDEG 254
GAG YA N G VS TG GE+I++ LAR +E +G ++EA D +K R+ +G
Sbjct: 206 GAGGYADNDIGAVSTTGHGESILKVNLARLTLFHIE-QGKTVEEAADLSLGYMKSRV-KG 263
Query: 255 QAGLIAVSKNGEVACGFNANGMFRGCATEDGFMEVGIWP 293
GLI VSK G+ + + M A +DG + GI P
Sbjct: 264 LGGLIVVSKTGDWVAKWTSTSMPW-AAAKDGKLHFGIDP 301
>pdb|3TKJ|A Chain A, Crystal Structure Of Human Asparaginase-Like Protein 1
Thr168ala
pdb|3TKJ|B Chain B, Crystal Structure Of Human Asparaginase-Like Protein 1
Thr168ala
Length = 319
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 148/279 (53%), Gaps = 35/279 (12%)
Query: 19 VRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEK 78
V LE DP FN+G GS L NG VEM+ASIMDG GAVS + + NPI LARLVMEK
Sbjct: 63 VVALEDDPEFNAGCGSVLNTNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLARLVMEK 122
Query: 79 SPHSYLAFSGAEEFARQQGVELFDNEYFITEENVGMLKLAKEANSILFDYRIPNGGFETC 138
+PH +L GA +FA GV E +TE N +L KE +
Sbjct: 123 TPHCFLTDQGAAQFAAAMGVPEIPGEKLVTERN--KKRLEKEKH---------------- 164
Query: 139 SAGAAATDSPLQMNGLPISLYAPETVGCVVVDQEGRCAAATSTGGLMNKRTGRIGDSPLI 198
GA TD + VG V +D +G A ATSTGG++NK GR+GDSP +
Sbjct: 165 EKGAQKTDCQKNLG----------AVGAVALDCKGNVAYATSTGGIVNKMVGRVGDSPCL 214
Query: 199 GAGTYASNLCG-VSCTGEGEAIIRATLARDVAAVMEYKGLCLQEAVDF---VIKERLDEG 254
GAG YA N G VS TG GE+I++ LAR +E +G ++EA D +K R+ +G
Sbjct: 215 GAGGYADNDIGAVSTTGHGESILKVNLARLTLFHIE-QGKTVEEAADLSLGYMKSRV-KG 272
Query: 255 QAGLIAVSKNGEVACGFNANGMFRGCATEDGFMEVGIWP 293
GLI VSK G+ + + M A +DG + GI P
Sbjct: 273 LGGLIVVSKTGDWVAKWTSTSMPW-AAAKDGKLHFGIDP 310
>pdb|2GEZ|A Chain A, Crystal Structure Of Potassium-Independent Plant
Asparaginase
pdb|2GEZ|C Chain C, Crystal Structure Of Potassium-Independent Plant
Asparaginase
pdb|2GEZ|E Chain E, Crystal Structure Of Potassium-Independent Plant
Asparaginase
pdb|2GEZ|G Chain G, Crystal Structure Of Potassium-Independent Plant
Asparaginase
Length = 195
Score = 147 bits (372), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 86/110 (78%)
Query: 19 VRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEK 78
VRELE FN+G GS LT +GTVEMEASIMDG +CGAVSGL+TV NPISLARLVM+K
Sbjct: 59 VRELENIEHFNAGIGSVLTNSGTVEMEASIMDGNTMKCGAVSGLSTVLNPISLARLVMDK 118
Query: 79 SPHSYLAFSGAEEFARQQGVELFDNEYFITEENVGMLKLAKEANSILFDY 128
+PH YLAF GA++FA+QQGVE D+ + IT ENV LKLA EAN + DY
Sbjct: 119 TPHIYLAFQGAQDFAKQQGVETVDSSHLITAENVERLKLAIEANRVQVDY 168
>pdb|1T3M|B Chain B, Structure Of The Isoaspartyl Peptidase With L-Asparaginase
Activity From E. Coli
pdb|1T3M|D Chain D, Structure Of The Isoaspartyl Peptidase With L-Asparaginase
Activity From E. Coli
Length = 147
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
Query: 163 TVGCVVVDQEGRCAAATSTGGLMNKRTGRIGDSPLIGAGTYASNL-CGVSCTGEGEAIIR 221
TVG V +D +G AAATSTGG+ NK GR+GDSPL+GAG YA+N VSCTG GE IR
Sbjct: 1 TVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIR 60
Query: 222 ATLARDVAAVMEYKGLCLQEAVDFVIKERLDE--GQAGLIAVSKNGEVACGFNANGMFR 278
A A D+AA+M+Y GL L EA + V+ E+L G GLIA+ G VA FN GM+R
Sbjct: 61 ALAAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYR 119
>pdb|1JN9|B Chain B, Structure Of Putative Asparaginase Encoded By Escherichia
Coli Ybik Gene
pdb|1JN9|D Chain D, Structure Of Putative Asparaginase Encoded By Escherichia
Coli Ybik Gene
pdb|1K2X|B Chain B, Crystal Structure Of Putative Asparaginase Encoded By
Escherichia Coli Ybik Gene
pdb|1K2X|D Chain D, Crystal Structure Of Putative Asparaginase Encoded By
Escherichia Coli Ybik Gene
Length = 143
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
Query: 163 TVGCVVVDQEGRCAAATSTGGLMNKRTGRIGDSPLIGAGTYASNL-CGVSCTGEGEAIIR 221
TVG V +D +G AAATSTGG+ NK GR+GDSPL+GAG YA+N VSCTG GE IR
Sbjct: 1 TVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIR 60
Query: 222 ATLARDVAAVMEYKGLCLQEAVDFVIKERLDE--GQAGLIAVSKNGEVACGFNANGMFR 278
A A D+AA+M+Y GL L EA + V+ E+L G GLIA+ G VA FN GM+R
Sbjct: 61 ALAAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYR 119
>pdb|2ZAL|B Chain B, Crystal Structure Of E. Coli Isoaspartyl
AminopeptidaseL-Asparaginase In Complex With L-Aspartate
pdb|2ZAL|D Chain D, Crystal Structure Of E. Coli Isoaspartyl
AminopeptidaseL-Asparaginase In Complex With L-Aspartate
Length = 137
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
Query: 163 TVGCVVVDQEGRCAAATSTGGLMNKRTGRIGDSPLIGAGTYASNL-CGVSCTGEGEAIIR 221
TVG V +D +G AAATSTGG+ NK GR+GDSPL+GAG YA+N VSCTG GE IR
Sbjct: 1 TVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIR 60
Query: 222 ATLARDVAAVMEYKGLCLQEAVDFVIKERLDE--GQAGLIAVSKNGEVACGFNANGMFR 278
A A D+AA+M+Y GL L EA + V+ E+L G GLIA+ G VA FN GM+R
Sbjct: 61 ALAAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYR 119
>pdb|9GAF|A Chain A, Precursor Of The W11f Mutant Glycosylasparaginase From
Flavobacterium Meningosepticum
pdb|9GAF|C Chain C, Precursor Of The W11f Mutant Glycosylasparaginase From
Flavobacterium Meningosepticum
Length = 295
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 135/288 (46%), Gaps = 54/288 (18%)
Query: 6 WLLLMIGG----FTPTQVRELETDPLFNS-GRGSALTENGTVEMEASIMDGPKRRCGAVS 60
W +L GG VR +E DP S G G +G V ++A IMD G+V+
Sbjct: 22 WKVLSKGGKALDAVEKGVRLVEDDPTERSVGYGGRPDRDGRVTLDACIMD-ENYNIGSVA 80
Query: 61 GLTTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQGVELFDNEYFITEENVGMLKLAKE 120
+ +KNPIS+AR VMEK+PH L GA EFA QG F E +T E+ KE
Sbjct: 81 CMEHIKNPISVARAVMEKTPHVMLVGDGALEFALSQG---FKKENLLTAES------EKE 131
Query: 121 ANSILFDYRIPNGGFETCSAGAAATDSPLQMNGLPISLYAPETVGCVVVDQEGRCAAATS 180
L + P+ +++ +T+G + +D +G + A +
Sbjct: 132 WKEWL----------------KTSQYKPI------VNIENHDTIGMIALDAQGNLSGACT 169
Query: 181 TGGLMNKRTGRIGDSPLIGAGTYASNLCG-VSCTGEGEAIIRATLARDVAAVMEY----K 235
T G+ K GR+GDSP+IGAG + N G + TG GE +IR V +M +
Sbjct: 170 TSGMAYKMHGRVGDSPIIGAGLFVDNEIGAATATGHGEEVIRTVGTHLVVELMNQGRTPQ 229
Query: 236 GLCLQEAVDFVIK------ERLDEGQAGLIAVSKNGE-----VACGFN 272
C +EAV+ ++K + L + Q G IA++K GE + GFN
Sbjct: 230 QAC-KEAVERIVKIVNRRGKNLKDIQVGFIALNKKGEYGAYCIQDGFN 276
>pdb|1P4K|A Chain A, Crystal Structure Of The Glycosylasparaginase Precursor
D151n Mutant
pdb|1P4K|C Chain C, Crystal Structure Of The Glycosylasparaginase Precursor
D151n Mutant
pdb|1P4V|A Chain A, Crystal Structure Of The Glycosylasparaginase Precursor
D151n Mutant With Glycine
pdb|1P4V|C Chain C, Crystal Structure Of The Glycosylasparaginase Precursor
D151n Mutant With Glycine
Length = 295
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 134/288 (46%), Gaps = 54/288 (18%)
Query: 6 WLLLMIGG----FTPTQVRELETDPLFNS-GRGSALTENGTVEMEASIMDGPKRRCGAVS 60
W +L GG VR +E DP S G G +G V ++A IMD G+V+
Sbjct: 22 WKVLSKGGKALDAVEKGVRLVEDDPTERSVGYGGRPDRDGRVTLDACIMD-ENYNIGSVA 80
Query: 61 GLTTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQGVELFDNEYFITEENVGMLKLAKE 120
+ +KNPIS+AR VMEK+PH L GA EFA QG F E +T E+ KE
Sbjct: 81 CMEHIKNPISVARAVMEKTPHVMLVGDGALEFALSQG---FKKENLLTAES------EKE 131
Query: 121 ANSILFDYRIPNGGFETCSAGAAATDSPLQMNGLPISLYAPETVGCVVVDQEGRCAAATS 180
L + P+ +++ T+G + +D +G + A +
Sbjct: 132 WKEWL----------------KTSQYKPI------VNIENHNTIGMIALDAQGNLSGACT 169
Query: 181 TGGLMNKRTGRIGDSPLIGAGTYASNLCG-VSCTGEGEAIIRATLARDVAAVMEY----K 235
T G+ K GR+GDSP+IGAG + N G + TG GE +IR V +M +
Sbjct: 170 TSGMAYKMHGRVGDSPIIGAGLFVDNEIGAATATGHGEEVIRTVGTHLVVELMNQGRTPQ 229
Query: 236 GLCLQEAVDFVIK------ERLDEGQAGLIAVSKNGE-----VACGFN 272
C +EAV+ ++K + L + Q G IA++K GE + GFN
Sbjct: 230 QAC-KEAVERIVKIVNRRGKNLKDIQVGFIALNKKGEYGAYCIQDGFN 276
>pdb|9GAA|A Chain A, Precursor Of The T152a Mutant Glycosylasparaginase From
Flavobacterium Meningosepticum
pdb|9GAA|C Chain C, Precursor Of The T152a Mutant Glycosylasparaginase From
Flavobacterium Meningosepticum
Length = 295
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 134/288 (46%), Gaps = 54/288 (18%)
Query: 6 WLLLMIGG----FTPTQVRELETDPLFNS-GRGSALTENGTVEMEASIMDGPKRRCGAVS 60
W +L GG VR +E DP S G G +G V ++A IMD G+V+
Sbjct: 22 WKVLSKGGKALDAVEKGVRLVEDDPTERSVGYGGRPDRDGRVTLDACIMD-ENYNIGSVA 80
Query: 61 GLTTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQGVELFDNEYFITEENVGMLKLAKE 120
+ +KNPIS+AR VMEK+PH L GA EFA QG F E +T E+ KE
Sbjct: 81 CMEHIKNPISVARAVMEKTPHVMLVGDGALEFALSQG---FKKENLLTAES------EKE 131
Query: 121 ANSILFDYRIPNGGFETCSAGAAATDSPLQMNGLPISLYAPETVGCVVVDQEGRCAAATS 180
L + P+ +++ + +G + +D +G + A +
Sbjct: 132 WKEWL----------------KTSQYKPI------VNIENHDAIGMIALDAQGNLSGACT 169
Query: 181 TGGLMNKRTGRIGDSPLIGAGTYASNLCG-VSCTGEGEAIIRATLARDVAAVMEY----K 235
T G+ K GR+GDSP+IGAG + N G + TG GE +IR V +M +
Sbjct: 170 TSGMAYKMHGRVGDSPIIGAGLFVDNEIGAATATGHGEEVIRTVGTHLVVELMNQGRTPQ 229
Query: 236 GLCLQEAVDFVIK------ERLDEGQAGLIAVSKNGE-----VACGFN 272
C +EAV+ ++K + L + Q G IA++K GE + GFN
Sbjct: 230 QAC-KEAVERIVKIVNRRGKNLKDIQVGFIALNKKGEYGAYCIQDGFN 276
>pdb|9GAC|A Chain A, Precursor Of The T152c Mutant Glycosylasparaginase From
Flavobacterium Meningosepticum
pdb|9GAC|C Chain C, Precursor Of The T152c Mutant Glycosylasparaginase From
Flavobacterium Meningosepticum
Length = 295
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 134/288 (46%), Gaps = 54/288 (18%)
Query: 6 WLLLMIGG----FTPTQVRELETDPLFNS-GRGSALTENGTVEMEASIMDGPKRRCGAVS 60
W +L GG VR +E DP S G G +G V ++A IMD G+V+
Sbjct: 22 WKVLSKGGKALDAVEKGVRLVEDDPTERSVGYGGRPDRDGRVTLDACIMD-ENYNIGSVA 80
Query: 61 GLTTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQGVELFDNEYFITEENVGMLKLAKE 120
+ +KNPIS+AR VMEK+PH L GA EFA QG F E +T E+ KE
Sbjct: 81 CMEHIKNPISVARAVMEKTPHVMLVGDGALEFALSQG---FKKENLLTAES------EKE 131
Query: 121 ANSILFDYRIPNGGFETCSAGAAATDSPLQMNGLPISLYAPETVGCVVVDQEGRCAAATS 180
L + P+ +++ + +G + +D +G + A +
Sbjct: 132 WKEWL----------------KTSQYKPI------VNIENHDCIGMIALDAQGNLSGACT 169
Query: 181 TGGLMNKRTGRIGDSPLIGAGTYASNLCG-VSCTGEGEAIIRATLARDVAAVMEY----K 235
T G+ K GR+GDSP+IGAG + N G + TG GE +IR V +M +
Sbjct: 170 TSGMAYKMHGRVGDSPIIGAGLFVDNEIGAATATGHGEEVIRTVGTHLVVELMNQGRTPQ 229
Query: 236 GLCLQEAVDFVIK------ERLDEGQAGLIAVSKNGE-----VACGFN 272
C +EAV+ ++K + L + Q G IA++K GE + GFN
Sbjct: 230 QAC-KEAVERIVKIVNRRGKNLKDIQVGFIALNKKGEYGAYCIQDGFN 276
>pdb|3LJQ|A Chain A, Crystal Structure Of The Glycosylasparaginase T152c
Apo-Precursor
pdb|3LJQ|C Chain C, Crystal Structure Of The Glycosylasparaginase T152c
Apo-Precursor
Length = 299
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 134/288 (46%), Gaps = 54/288 (18%)
Query: 6 WLLLMIGG----FTPTQVRELETDPLFNS-GRGSALTENGTVEMEASIMDGPKRRCGAVS 60
W +L GG VR +E DP S G G +G V ++A IMD G+V+
Sbjct: 26 WKVLSKGGKALDAVEKGVRLVEDDPTERSVGYGGRPDRDGRVTLDACIMD-ENYNIGSVA 84
Query: 61 GLTTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQGVELFDNEYFITEENVGMLKLAKE 120
+ +KNPIS+AR VMEK+PH L GA EFA QG F E +T E+ KE
Sbjct: 85 CMEHIKNPISVARAVMEKTPHVMLVGDGALEFALSQG---FKKENLLTAES------EKE 135
Query: 121 ANSILFDYRIPNGGFETCSAGAAATDSPLQMNGLPISLYAPETVGCVVVDQEGRCAAATS 180
L + P+ +++ + +G + +D +G + A +
Sbjct: 136 WKEWL----------------KTSQYKPI------VNIENHDCIGMIALDAQGNLSGACT 173
Query: 181 TGGLMNKRTGRIGDSPLIGAGTYASNLCG-VSCTGEGEAIIRATLARDVAAVMEY----K 235
T G+ K GR+GDSP+IGAG + N G + TG GE +IR V +M +
Sbjct: 174 TSGMAYKMHGRVGDSPIIGAGLFVDNEIGAATATGHGEEVIRTVGTHLVVELMNQGRTPQ 233
Query: 236 GLCLQEAVDFVIK------ERLDEGQAGLIAVSKNGE-----VACGFN 272
C +EAV+ ++K + L + Q G IA++K GE + GFN
Sbjct: 234 QAC-KEAVERIVKIVNRRGKNLKDIQVGFIALNKKGEYGAYCIQDGFN 280
>pdb|2A8J|A Chain A, Crystal Structure Of Human Taspase1 (Acivated Form)
pdb|2A8J|B Chain B, Crystal Structure Of Human Taspase1 (Acivated Form)
Length = 420
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 107/237 (45%), Gaps = 41/237 (17%)
Query: 21 ELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLA-RLVME-- 77
ELE P N+G GS L G +E +ASIMDG GAV L+ +KNP+S+A RL+ E
Sbjct: 92 ELEDSPFTNAGMGSNLNLLGEIECDASIMDGKSLNFGAVGALSGIKNPVSVANRLLCEGQ 151
Query: 78 -------KSPHSYLAFSGAEEFARQQGVELFDNEYFIT-------EENVGMLKLAKEANS 123
+ P +L GA +A G+ T + N L+LA+ ++
Sbjct: 152 KGKLSAGRIPPCFLVGEGAYRWAVDHGIPSCPPNIMTTRFSLAAFKRNKRKLELAERVDT 211
Query: 124 ILFDYRIPNGGFETCSAGAAATDSPLQMNGLPISLYAPETVGCVVVDQEGRCAAATSTGG 183
+ E DS +TVG VVVD EG AAA S+GG
Sbjct: 212 DFMQLKKRRQSSEK------ENDSGTL-----------DTVGAVVVDHEGNVAAAVSSGG 254
Query: 184 LMNKRTGRIGDSPLIGAGTYASNL-------CGVSCTGEGEAIIRATLARDVAAVME 233
L K GR+G + L G G +A N VS +G GE ++R LAR+ + ++
Sbjct: 255 LALKHPGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTILARECSHALQ 311
>pdb|2A8M|A Chain A, Crystal Structure Of Human Taspase1 (T234s Mutant)
pdb|2A8M|B Chain B, Crystal Structure Of Human Taspase1 (T234s Mutant)
Length = 420
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 107/237 (45%), Gaps = 41/237 (17%)
Query: 21 ELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLA-RLVME-- 77
ELE P N+G GS L G +E +ASIMDG GAV L+ +KNP+S+A RL+ E
Sbjct: 92 ELEDSPFTNAGMGSNLNLLGEIECDASIMDGKSLNFGAVGALSGIKNPVSVANRLLCEGQ 151
Query: 78 -------KSPHSYLAFSGAEEFARQQGVELFDNEYFIT-------EENVGMLKLAKEANS 123
+ P +L GA +A G+ T + N L+LA+ ++
Sbjct: 152 KGKLSAGRIPPCFLVGEGAYRWAVDHGIPSCPPNIMTTRFSLAAFKRNKRKLELAERVDT 211
Query: 124 ILFDYRIPNGGFETCSAGAAATDSPLQMNGLPISLYAPETVGCVVVDQEGRCAAATSTGG 183
+ E DS ++VG VVVD EG AAA S+GG
Sbjct: 212 DFMQLKKRRQSSEK------ENDSGTL-----------DSVGAVVVDHEGNVAAAVSSGG 254
Query: 184 LMNKRTGRIGDSPLIGAGTYASNL-------CGVSCTGEGEAIIRATLARDVAAVME 233
L K GR+G + L G G +A N VS +G GE ++R LAR+ + ++
Sbjct: 255 LALKHPGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTILARECSHALQ 311
>pdb|2A8L|A Chain A, Crystal Structure Of Human Taspase1 (T234a Mutant)
pdb|2A8L|B Chain B, Crystal Structure Of Human Taspase1 (T234a Mutant)
Length = 420
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 106/237 (44%), Gaps = 41/237 (17%)
Query: 21 ELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLA-RLVME-- 77
ELE P N+G GS L G +E +ASIMDG GAV L+ +KNP+S+A RL+ E
Sbjct: 92 ELEDSPFTNAGMGSNLNLLGEIECDASIMDGKSLNFGAVGALSGIKNPVSVANRLLCEGQ 151
Query: 78 -------KSPHSYLAFSGAEEFARQQGVELFDNEYFIT-------EENVGMLKLAKEANS 123
+ P +L GA +A G+ T + N L+LA+ ++
Sbjct: 152 KGKLSAGRIPPCFLVGEGAYRWAVDHGIPSCPPNIMTTRFSLAAFKRNKRKLELAERVDT 211
Query: 124 ILFDYRIPNGGFETCSAGAAATDSPLQMNGLPISLYAPETVGCVVVDQEGRCAAATSTGG 183
+ E DS + VG VVVD EG AAA S+GG
Sbjct: 212 DFMQLKKRRQSSEK------ENDSGTL-----------DAVGAVVVDHEGNVAAAVSSGG 254
Query: 184 LMNKRTGRIGDSPLIGAGTYASNL-------CGVSCTGEGEAIIRATLARDVAAVME 233
L K GR+G + L G G +A N VS +G GE ++R LAR+ + ++
Sbjct: 255 LALKHPGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTILARECSHALQ 311
>pdb|2A8I|A Chain A, Crystal Structure Of Human Taspase1
pdb|2A8I|B Chain B, Crystal Structure Of Human Taspase1
Length = 420
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 21 ELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLA-RLVME-- 77
ELE P N+G GS L G +E +ASI DG GAV L+ +KNP+S+A RL+ E
Sbjct: 92 ELEDSPFTNAGXGSNLNLLGEIECDASIXDGKSLNFGAVGALSGIKNPVSVANRLLCEGQ 151
Query: 78 -------KSPHSYLAFSGAEEFARQQGVELFDNEYFITEENVGMLKLAKEANSILFDYRI 130
+ P +L GA +A G+ T ++ K K + R+
Sbjct: 152 KGKLSAGRIPPCFLVGEGAYRWAVDHGIPSCPPNIXTTRFSLAAFKRNKR--KLELAERV 209
Query: 131 PNGGFETCSAGAAATDSPLQMNGLPISLYAPETVGCVVVDQEGRCAAATSTGGLMNKRTG 190
+ F +++ L +TVG VVVD EG AAA S+GGL K G
Sbjct: 210 -DTDFXQLKKRRQSSEKENDSGTL-------DTVGAVVVDHEGNVAAAVSSGGLALKHPG 261
Query: 191 RIGDSPLIGAGTYASNL-------CGVSCTGEGEAIIRATLARDVAAVME 233
R+G + L G G +A N VS +G GE ++R LAR+ + ++
Sbjct: 262 RVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTILARECSHALQ 311
>pdb|1JN9|A Chain A, Structure Of Putative Asparaginase Encoded By Escherichia
Coli Ybik Gene
pdb|1JN9|C Chain C, Structure Of Putative Asparaginase Encoded By Escherichia
Coli Ybik Gene
pdb|1K2X|A Chain A, Crystal Structure Of Putative Asparaginase Encoded By
Escherichia Coli Ybik Gene
pdb|1K2X|C Chain C, Crystal Structure Of Putative Asparaginase Encoded By
Escherichia Coli Ybik Gene
Length = 177
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 67/110 (60%)
Query: 19 VRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEK 78
VR LE PLFN+G G+ T + T E++A +MDG + GAV+G++ ++NP+ ARLVME+
Sbjct: 56 VRLLEEXPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQ 115
Query: 79 SPHSYLAFSGAEEFARQQGVELFDNEYFITEENVGMLKLAKEANSILFDY 128
SPH + GAE FA +G+E E F T L A++ + + D+
Sbjct: 116 SPHVMMIGEGAENFAFARGMERVSPEIFSTSLRYEQLLAARKEGATVLDH 165
>pdb|1T3M|A Chain A, Structure Of The Isoaspartyl Peptidase With L-Asparaginase
Activity From E. Coli
pdb|1T3M|C Chain C, Structure Of The Isoaspartyl Peptidase With L-Asparaginase
Activity From E. Coli
Length = 177
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 67/110 (60%)
Query: 19 VRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEK 78
VR LE PLFN+G G+ T + T E++A +MDG + GAV+G++ ++NP+ ARLVME+
Sbjct: 56 VRLLEECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQ 115
Query: 79 SPHSYLAFSGAEEFARQQGVELFDNEYFITEENVGMLKLAKEANSILFDY 128
SPH + GAE FA +G+E E F T L A++ + + D+
Sbjct: 116 SPHVMMIGEGAENFAFARGMERVSPEIFSTSLRYEQLLAARKEGATVLDH 165
>pdb|2ZAL|C Chain C, Crystal Structure Of E. Coli Isoaspartyl
AminopeptidaseL-Asparaginase In Complex With L-Aspartate
pdb|2ZAL|A Chain A, Crystal Structure Of E. Coli Isoaspartyl
AminopeptidaseL-Asparaginase In Complex With L-Aspartate
Length = 160
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%)
Query: 19 VRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEK 78
VR LE PLFN+G G+ T + T E++A +MDG + GAV+G++ ++NP+ ARLVME+
Sbjct: 56 VRLLEECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQ 115
Query: 79 SPHSYLAFSGAEEFARQQGVELFDNEYFIT 108
SPH + GAE FA +G+E E F T
Sbjct: 116 SPHVMMIGEGAENFAFARGMERVSPEIFST 145
>pdb|1AYY|B Chain B, Glycosylasparaginase
pdb|1AYY|D Chain D, Glycosylasparaginase
pdb|2GAW|B Chain B, Wild Type Glycosylasparaginase From Flavobacterium
Meningosepticum
pdb|2GAW|D Chain D, Wild Type Glycosylasparaginase From Flavobacterium
Meningosepticum
Length = 144
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 17/126 (13%)
Query: 163 TVGCVVVDQEGRCAAATSTGGLMNKRTGRIGDSPLIGAGTYASNLCG-VSCTGEGEAIIR 221
T+G + +D +G + A +T G+ K GR+GDSP+IGAG + N G + TG GE +IR
Sbjct: 1 TIGMIALDAQGNLSGACTTSGMAYKMHGRVGDSPIIGAGLFVDNEIGAATATGHGEEVIR 60
Query: 222 ATLARDVAAVMEY----KGLCLQEAVDFVIK------ERLDEGQAGLIAVSKNGE----- 266
V +M + C +EAV+ ++K + L + Q G IA++K GE
Sbjct: 61 TVGTHLVVELMNQGRTPQQAC-KEAVERIVKIVNRRGKNLKDIQVGFIALNKKGEYGAYC 119
Query: 267 VACGFN 272
+ GFN
Sbjct: 120 IQDGFN 125
>pdb|1AYY|A Chain A, Glycosylasparaginase
pdb|1AYY|C Chain C, Glycosylasparaginase
pdb|2GAC|A Chain A, T152c Mutant Glycosylasparaginase From Flavobacterium
Meningosepticum
pdb|2GAC|C Chain C, T152c Mutant Glycosylasparaginase From Flavobacterium
Meningosepticum
pdb|2GAW|A Chain A, Wild Type Glycosylasparaginase From Flavobacterium
Meningosepticum
pdb|2GAW|C Chain C, Wild Type Glycosylasparaginase From Flavobacterium
Meningosepticum
pdb|2GL9|A Chain A, Crystal Structure Of Glycosylasparaginase-Substrate
Complex
pdb|2GL9|C Chain C, Crystal Structure Of Glycosylasparaginase-Substrate
Complex
Length = 151
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 19 VRELETDPLFNS-GRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVME 77
VR +E DP S G G +G V ++A IMD G+V+ + +KNPIS+AR VME
Sbjct: 39 VRLVEDDPTERSVGYGGRPDRDGRVTLDACIMD-ENYNIGSVACMEHIKNPISVARAVME 97
Query: 78 KSPHSYLAFSGAEEFARQQGVELFDNEYFITEEN 111
K+PH L GA EFA QG F E +T E+
Sbjct: 98 KTPHVMLVGDGALEFALSQG---FKKENLLTAES 128
>pdb|2GAC|B Chain B, T152c Mutant Glycosylasparaginase From Flavobacterium
Meningosepticum
pdb|2GAC|D Chain D, T152c Mutant Glycosylasparaginase From Flavobacterium
Meningosepticum
pdb|2GL9|B Chain B, Crystal Structure Of Glycosylasparaginase-Substrate
Complex
pdb|2GL9|D Chain D, Crystal Structure Of Glycosylasparaginase-Substrate
Complex
Length = 144
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 17/125 (13%)
Query: 164 VGCVVVDQEGRCAAATSTGGLMNKRTGRIGDSPLIGAGTYASNLCG-VSCTGEGEAIIRA 222
+G + +D +G + A +T G+ K GR+GDSP+IGAG + N G + TG GE +IR
Sbjct: 2 IGMIALDAQGNLSGACTTSGMAYKMHGRVGDSPIIGAGLFVDNEIGAATATGHGEEVIRT 61
Query: 223 TLARDVAAVMEY----KGLCLQEAVDFVIK------ERLDEGQAGLIAVSKNGE-----V 267
V +M + C +EAV+ ++K + L + Q G IA++K GE +
Sbjct: 62 VGTHLVVELMNQGRTPQQAC-KEAVERIVKIVNRRGKNLKDIQVGFIALNKKGEYGAYCI 120
Query: 268 ACGFN 272
GFN
Sbjct: 121 QDGFN 125
>pdb|1APY|B Chain B, Human Aspartylglucosaminidase
pdb|1APY|D Chain D, Human Aspartylglucosaminidase
pdb|1APZ|B Chain B, Human Aspartylglucosaminidase Complex With Reaction
Product
pdb|1APZ|D Chain D, Human Aspartylglucosaminidase Complex With Reaction
Product
Length = 141
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 163 TVGCVVVDQEGRCAAATSTGGLMNKRTGRIGDSPLIGAGTY 203
T+G VV+ + G AA TST G+ K GR+GDSP+ GAG Y
Sbjct: 1 TIGMVVIHKTGHIAAGTSTNGIKFKIHGRVGDSPIPGAGAY 41
>pdb|1APY|A Chain A, Human Aspartylglucosaminidase
pdb|1APY|C Chain C, Human Aspartylglucosaminidase
pdb|1APZ|A Chain A, Human Aspartylglucosaminidase Complex With Reaction
Product
pdb|1APZ|C Chain C, Human Aspartylglucosaminidase Complex With Reaction
Product
Length = 162
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 31 GRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEKSPHSYLAFSGAE 90
G G + E G ++A IMDG GAV L +KN I +AR V+E + H+ L A
Sbjct: 51 GFGGSPDELGETTLDAMIMDGTTMDVGAVGDLRRIKNAIGVARKVLEHTTHTLLVGESAT 110
Query: 91 EFARQQGVELFDNEYFITEENVGMLK--LAKEANSILFDYRIPN 132
FA+ G F NE T + + LA+ + IP+
Sbjct: 111 TFAQSMG---FINEDLSTSASQALHSDWLARNCQPNYWRNVIPD 151
>pdb|1QVR|A Chain A, Crystal Structure Analysis Of Clpb
pdb|1QVR|B Chain B, Crystal Structure Analysis Of Clpb
pdb|1QVR|C Chain C, Crystal Structure Analysis Of Clpb
Length = 854
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 8 LLMIGGFTPTQVRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGL 62
L +IG T + RE+E DP + TVE SI+ G K + G+
Sbjct: 300 LRLIGATTLDEYREIEKDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGV 354
>pdb|4HSE|A Chain A, Crystal Structure Of Clpb Nbd1 In Complex With Guanidinium
Chloride And Adp
Length = 397
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 8 LLMIGGFTPTQVRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGL 62
L +IG T + RE+E DP + TVE SI+ G K + G+
Sbjct: 163 LRLIGATTLDEYREIEKDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGV 217
>pdb|2H7R|A Chain A, L244a Mutant Of Cytochrome P450cam Complexed With
Imidazole
pdb|2H7S|A Chain A, L244a Mutant Of Cytochrome P450cam
pdb|2H7S|C Chain C, L244a Mutant Of Cytochrome P450cam
Length = 414
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 35 ALTENGTVEMEASIMDGPKRRCGA--VSGLTTVKNPISLARLVMEKSP 80
++ NG V D KR CGA V GL TV N +S + + KSP
Sbjct: 221 SIVANGQVNGRPITSDEAKRMCGALLVGGLDTVVNFLSFSMEFLAKSP 268
>pdb|2QBL|A Chain A, Crystal Structure Of Ferric G248t Cytochrome P450cam
pdb|2QBM|A Chain A, Crystal Structure Of The P450cam G248t Mutant In The
Cyanide Bound State
Length = 421
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 35 ALTENGTVEMEASIMDGPKRRCGA--VSGLTTVKNPISLARLVMEKSP 80
++ NG V D KR CG V+GL TV N +S + + KSP
Sbjct: 222 SIVANGQVNGRPITSDEAKRMCGLLLVTGLDTVVNFLSFSMEFLAKSP 269
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,723,487
Number of Sequences: 62578
Number of extensions: 360165
Number of successful extensions: 796
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 740
Number of HSP's gapped (non-prelim): 44
length of query: 293
length of database: 14,973,337
effective HSP length: 98
effective length of query: 195
effective length of database: 8,840,693
effective search space: 1723935135
effective search space used: 1723935135
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)