Your job contains 1 sequence.
>022716
MGESSIPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI
ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDG
THIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDP
MGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISN
VHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFENA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022716
(293 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2161840 - symbol:TEX1 "AT5G56130" species:3702... 815 1.4e-142 2
ZFIN|ZDB-GENE-040808-14 - symbol:thoc3 "THO complex 3" sp... 472 1.1e-80 2
UNIPROTKB|F1NUQ0 - symbol:THOC3 "Uncharacterized protein"... 462 1.5e-79 2
UNIPROTKB|Q29RH4 - symbol:THOC3 "THO complex subunit 3" s... 456 1.5e-79 2
UNIPROTKB|E2RC43 - symbol:THOC3 "Uncharacterized protein"... 456 1.5e-79 2
UNIPROTKB|Q96J01 - symbol:THOC3 "THO complex subunit 3" s... 456 1.5e-79 2
UNIPROTKB|F1S386 - symbol:THOC3 "Uncharacterized protein"... 456 1.5e-79 2
MGI|MGI:1920916 - symbol:Thoc3 "THO complex 3" species:10... 456 1.5e-79 2
RGD|1311669 - symbol:Thoc3 "THO complex 3" species:10116 ... 456 1.5e-79 2
FB|FBgn0037569 - symbol:tex "tex" species:7227 "Drosophil... 411 1.4e-70 2
UNIPROTKB|E1BDF6 - symbol:E1BDF6 "Uncharacterized protein... 362 4.8e-66 2
POMBASE|SPCC18B5.10c - symbol:SPCC18B5.10c "TREX complex ... 285 6.1e-52 2
DICTYBASE|DDB_G0276031 - symbol:DDB_G0276031 "WD40 repeat... 282 9.3e-35 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 163 2.6e-18 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 163 3.5e-18 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 163 4.4e-18 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 163 4.4e-18 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 163 4.4e-18 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 163 4.4e-18 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 163 4.4e-18 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 170 4.6e-17 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 159 1.5e-16 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 163 3.1e-16 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 155 3.5e-16 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 150 7.2e-16 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 163 1.2e-15 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 147 1.5e-15 2
WB|WBGene00009341 - symbol:thoc-3 species:6239 "Caenorhab... 207 1.5e-15 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 137 1.8e-15 2
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 209 1.8e-15 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 150 1.8e-15 2
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 149 2.1e-15 2
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 150 2.8e-15 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 147 3.0e-15 2
TAIR|locus:2159562 - symbol:AT5G08560 "AT5G08560" species... 165 3.8e-15 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 139 4.3e-15 2
UNIPROTKB|F1NYZ8 - symbol:TBL1XR1 "Uncharacterized protei... 208 5.2e-15 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 156 5.5e-15 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 158 6.8e-15 2
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 146 7.1e-15 2
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 148 7.3e-15 2
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 154 1.4e-14 2
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 143 1.6e-14 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 203 1.8e-14 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 201 1.9e-14 1
UNIPROTKB|F1MFJ6 - symbol:TBL1XR1 "Uncharacterized protei... 204 2.0e-14 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 202 2.2e-14 1
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 141 2.5e-14 2
ZFIN|ZDB-GENE-041014-277 - symbol:wdr26b "WD repeat domai... 155 2.9e-14 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 147 3.4e-14 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 199 3.7e-14 1
UNIPROTKB|Q9BZK7 - symbol:TBL1XR1 "F-box-like/WD repeat-c... 202 4.0e-14 1
UNIPROTKB|F1SGD0 - symbol:TBL1XR1 "Uncharacterized protei... 202 4.0e-14 1
MGI|MGI:2441730 - symbol:Tbl1xr1 "transducin (beta)-like ... 202 4.0e-14 1
RGD|1560053 - symbol:Tbl1xr1 "transducin (beta)-like 1 X-... 202 4.0e-14 1
MGI|MGI:1336172 - symbol:Tbl1x "transducin (beta)-like 1 ... 202 4.2e-14 1
RGD|1563868 - symbol:Tbl1x "transducin (beta)-like 1 X-li... 202 4.2e-14 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 140 4.5e-14 2
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 198 4.9e-14 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 198 4.9e-14 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 198 4.9e-14 1
MGI|MGI:1913972 - symbol:Spag16 "sperm associated antigen... 201 5.1e-14 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 175 5.9e-14 2
UNIPROTKB|Q8N0X2 - symbol:SPAG16 "Sperm-associated antige... 187 6.1e-14 2
UNIPROTKB|O60907 - symbol:TBL1X "F-box-like/WD repeat-con... 201 6.7e-14 1
UNIPROTKB|E1BV27 - symbol:TBL1X "Uncharacterized protein"... 200 7.5e-14 1
UNIPROTKB|B7TCI5 - symbol:TBL1X "Transducin beta-like 1" ... 200 7.6e-14 1
MGI|MGI:1923825 - symbol:Wdr26 "WD repeat domain 26" spec... 148 1.1e-13 2
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 149 1.2e-13 2
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 196 1.2e-13 1
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 163 1.2e-13 2
UNIPROTKB|Q2TBM8 - symbol:WDR26 "WD repeat domain 26" spe... 145 1.2e-13 2
UNIPROTKB|F1PIR1 - symbol:WDR26 "Uncharacterized protein"... 145 1.2e-13 2
UNIPROTKB|F1P3E7 - symbol:WDR26 "Uncharacterized protein"... 148 1.3e-13 2
UNIPROTKB|B8YE10 - symbol:TBL1Y "Transducin (Beta)-like 1... 198 1.4e-13 1
UNIPROTKB|Q4R8H1 - symbol:TBL1X "F-box-like/WD repeat-con... 198 1.7e-13 1
UNIPROTKB|Q9BQ87 - symbol:TBL1Y "F-box-like/WD repeat-con... 197 1.9e-13 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 193 2.0e-13 1
UNIPROTKB|F1S8S6 - symbol:WDR26 "Uncharacterized protein"... 145 2.6e-13 2
UNIPROTKB|Q9H7D7 - symbol:WDR26 "WD repeat-containing pro... 145 2.6e-13 2
UNIPROTKB|C3UJQ7 - symbol:TBL1Y "Transducin (Beta)-like 1... 196 2.6e-13 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 148 3.1e-13 2
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 148 3.1e-13 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 193 3.6e-13 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 193 3.6e-13 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 193 3.6e-13 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 193 3.6e-13 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 193 3.6e-13 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 193 3.6e-13 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 193 3.6e-13 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 193 3.6e-13 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 193 3.6e-13 1
TAIR|locus:2158232 - symbol:HOS15 "high expression of osm... 195 4.7e-13 1
UNIPROTKB|G4MKJ2 - symbol:MGG_04473 "WD repeat containing... 131 4.8e-13 2
FB|FBgn0027524 - symbol:CG3909 species:7227 "Drosophila m... 127 5.0e-13 2
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 195 5.4e-13 1
RGD|1565589 - symbol:Wdr26 "WD repeat domain 26" species:... 141 6.4e-13 2
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 136 7.0e-13 2
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 190 8.6e-13 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 190 9.2e-13 1
WARNING: Descriptions of 936 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2161840 [details] [associations]
symbol:TEX1 "AT5G56130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 GO:GO:0010267
EMBL:AB011476 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000264781
OMA:LAYACDD UniGene:At.29405 UniGene:At.29406 EMBL:AY093120
EMBL:BT000174 IPI:IPI00517881 RefSeq:NP_200424.1
ProteinModelPortal:Q9FKT5 SMR:Q9FKT5 STRING:Q9FKT5 PaxDb:Q9FKT5
PRIDE:Q9FKT5 EnsemblPlants:AT5G56130.1 GeneID:835712
KEGG:ath:AT5G56130 TAIR:At5g56130 InParanoid:Q9FKT5
PhylomeDB:Q9FKT5 ProtClustDB:CLSN2687157 ArrayExpress:Q9FKT5
Genevestigator:Q9FKT5 Uniprot:Q9FKT5
Length = 315
Score = 815 (292.0 bits), Expect = 1.4e-142, Sum P(2) = 1.4e-142
Identities = 144/169 (85%), Positives = 158/169 (93%)
Query: 1 MGESSIPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI 60
M E++IPFK+LHSREY GHKKKVHSVAWN GTKLASGSVDQTAR+W+IEPHGH K KD+
Sbjct: 1 MEETTIPFKSLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDL 60
Query: 61 ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDG 120
EL+GH DSVDQLCWDPKH+DL+ATASGDK+VRLWDARSGKC+QQ ELSGENINITYKPDG
Sbjct: 61 ELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDG 120
Query: 121 THIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTG 169
TH+AVGNRDDELTILDVRKFKP+HRRKF YEVNEIAWNM G+ FFLTTG
Sbjct: 121 THVAVGNRDDELTILDVRKFKPLHRRKFNYEVNEIAWNMPGDFFFLTTG 169
Score = 600 (216.3 bits), Expect = 1.4e-142, Sum P(2) = 1.4e-142
Identities = 111/129 (86%), Positives = 121/129 (93%)
Query: 166 LTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGD 225
LT AGCYCIAIDP GRYFAVGSADSLVSLWDIS+MLC+RTFTKLEWPVRTISF+++G+
Sbjct: 187 LTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGE 246
Query: 226 YIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKN-KYQADEGV 284
YIASASEDLFIDI+NV TGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKN KY DEGV
Sbjct: 247 YIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNPKYNTDEGV 306
Query: 285 FRIYGFENA 293
FRI+GFE++
Sbjct: 307 FRIFGFESS 315
>ZFIN|ZDB-GENE-040808-14 [details] [associations]
symbol:thoc3 "THO complex 3" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040808-14 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 KO:K12880
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BX511257 EMBL:BC079495 EMBL:BC152622
IPI:IPI00485776 RefSeq:NP_001003758.1 UniGene:Dr.78573
STRING:Q6AXK9 Ensembl:ENSDART00000079016 GeneID:445302
KEGG:dre:445302 InParanoid:Q6AXK9 NextBio:20832048 Uniprot:Q6AXK9
Length = 322
Score = 472 (171.2 bits), Expect = 1.1e-80, Sum P(2) = 1.1e-80
Identities = 92/174 (52%), Positives = 115/174 (66%)
Query: 8 FKNLH-SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHA 66
F+N + SRE+ H KVHSVAW+C G +LASGS D+TA V+ +E VK+ RGH
Sbjct: 13 FRNNNKSREFPAHSAKVHSVAWSCDGKRLASGSFDKTASVFVLEKDR--LVKENNYRGHG 70
Query: 67 DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVG 126
DSVDQLCW P + DL TASGDKT+R+WD R+ KC GENINI + PDG IAVG
Sbjct: 71 DSVDQLCWHPTNPDLFVTASGDKTIRIWDVRTTKCMATVSTKGENINICWSPDGQTIAVG 130
Query: 127 NRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDP 180
N+DD +T +D + +P +F +EVNEI+WN +MFFLT GN GC I P
Sbjct: 131 NKDDVVTFIDAKTHRPRAEEQFKFEVNEISWNNDNDMFFLTNGN-GCINILSYP 183
Score = 357 (130.7 bits), Expect = 1.1e-80, Sum P(2) = 1.1e-80
Identities = 66/125 (52%), Positives = 89/125 (71%)
Query: 171 AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA 230
+ C CI DP G+YFA GSAD+LVSLW++ E++CVR F++L+WPVRT+SFSH G +ASA
Sbjct: 196 SNCICIKFDPTGKYFATGSADALVSLWNVEELVCVRCFSRLDWPVRTLSFSHDGKMLASA 255
Query: 231 SEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKN-KYQADE--GVFRI 287
SED FIDI+ V TG + +I C + +V W+PK LLAYA DDK KY ++ G ++
Sbjct: 256 SEDHFIDIAEVETGEKLWEIQCESPTFTVAWHPKRPLLAYACDDKEGKYDSNREAGTVKL 315
Query: 288 YGFEN 292
+G N
Sbjct: 316 FGLPN 320
>UNIPROTKB|F1NUQ0 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000346 "transcription export complex" evidence=IEA]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006406 GO:GO:0000346
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:AADN02028708 IPI:IPI00595007
Ensembl:ENSGALT00000040847 Uniprot:F1NUQ0
Length = 381
Score = 462 (167.7 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 90/171 (52%), Positives = 110/171 (64%)
Query: 10 NLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
N SRE+ H KVHSVAW+C G +LASGS D+TA V+ +E VK+ RGH DSV
Sbjct: 17 NTRSREFPAHGAKVHSVAWSCCGRRLASGSFDKTASVFLLEKDR--LVKENNYRGHGDSV 74
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
DQLCW P + DL TASGDKT+R+WD R+ KC GENINI + PDG IAVGN+D
Sbjct: 75 DQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKD 134
Query: 130 DELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDP 180
D +T +D + + +F +EVNEI+WN MFFLT GN GC I P
Sbjct: 135 DVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGN-GCINILSYP 184
Score = 356 (130.4 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 66/123 (53%), Positives = 89/123 (72%)
Query: 171 AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA 230
+ C CI DPMG+YFA GSAD+LVSLWD+ E++CVR F++L+WPVRT+SFSH G +ASA
Sbjct: 197 SNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASA 256
Query: 231 SEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKN-KYQA--DEGVFRI 287
SED FIDI+ V TG + ++ C + +V W+PK LLA+A DDK+ KY + + G +
Sbjct: 257 SEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKS 316
Query: 288 YGF 290
GF
Sbjct: 317 SGF 319
Score = 107 (42.7 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 30/129 (23%), Positives = 57/129 (44%)
Query: 16 YTGHKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
Y GH V + W+ + L + S D+T R+W + + + +G ++++ +CW
Sbjct: 67 YRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKC--IATVNTKG--ENIN-ICW 121
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTI 134
P IA + D V DA++ + + + E I++ D + N + + I
Sbjct: 122 SPD-GQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI 180
Query: 135 LDVRKFKPI 143
L + KPI
Sbjct: 181 LSYPELKPI 189
>UNIPROTKB|Q29RH4 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 KO:K12880 GO:GO:0003723 GO:GO:0051028 EMBL:BC114172
IPI:IPI00732803 RefSeq:NP_001039765.1 UniGene:Bt.3953
ProteinModelPortal:Q29RH4 GeneID:529231 KEGG:bta:529231 CTD:84321
HOVERGEN:HBG059732 NextBio:20874992 InterPro:IPR011659 Pfam:PF07676
Uniprot:Q29RH4
Length = 351
Score = 456 (165.6 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 88/168 (52%), Positives = 109/168 (64%)
Query: 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
+RE+ H KVHSVAW+C G +LASGS D+TA V+ +E VK+ RGH DSVDQL
Sbjct: 48 TREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDR--LVKENNYRGHGDSVDQL 105
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
CW P + DL TASGDKT+R+WD R+ KC GENINI + PDG IAVGN+DD +
Sbjct: 106 CWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVV 165
Query: 133 TILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDP 180
T +D + + +F +EVNEI+WN MFFLT GN GC I P
Sbjct: 166 TFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGN-GCINILSYP 212
Score = 362 (132.5 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 66/125 (52%), Positives = 91/125 (72%)
Query: 171 AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA 230
+ C CI DPMG+YFA GSAD+LVSLWD+ E++CVR F++L+WPVRT+SFSH G +ASA
Sbjct: 225 SNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASA 284
Query: 231 SEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKN-KYQA--DEGVFRI 287
SED FIDI+ V TG + ++ C + +V W+PK LLA+A DDK+ KY + + G ++
Sbjct: 285 SEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKL 344
Query: 288 YGFEN 292
+G N
Sbjct: 345 FGLPN 349
Score = 106 (42.4 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 29/129 (22%), Positives = 57/129 (44%)
Query: 16 YTGHKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
Y GH V + W+ + L + S D+T R+W + + + +G ++++ +CW
Sbjct: 95 YRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKC--IATVNTKG--ENIN-ICW 149
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTI 134
P IA + D V DA++ + + + E I++ D + N + + I
Sbjct: 150 SPD-GQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI 208
Query: 135 LDVRKFKPI 143
L + KP+
Sbjct: 209 LSYPELKPV 217
>UNIPROTKB|E2RC43 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046784 "intronless viral mRNA export from
host nucleus" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 InterPro:IPR011659
Pfam:PF07676 OMA:LAYACDD EMBL:AAEX03002980 RefSeq:XP_537899.2
ProteinModelPortal:E2RC43 Ensembl:ENSCAFT00000022750 GeneID:480781
KEGG:cfa:480781 NextBio:20855728 Uniprot:E2RC43
Length = 351
Score = 456 (165.6 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 88/168 (52%), Positives = 109/168 (64%)
Query: 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
+RE+ H KVHSVAW+C G +LASGS D+TA V+ +E VK+ RGH DSVDQL
Sbjct: 48 TREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDR--LVKENNYRGHGDSVDQL 105
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
CW P + DL TASGDKT+R+WD R+ KC GENINI + PDG IAVGN+DD +
Sbjct: 106 CWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVV 165
Query: 133 TILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDP 180
T +D + + +F +EVNEI+WN MFFLT GN GC I P
Sbjct: 166 TFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGN-GCINILSYP 212
Score = 362 (132.5 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 66/125 (52%), Positives = 91/125 (72%)
Query: 171 AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA 230
+ C CI DPMG+YFA GSAD+LVSLWD+ E++CVR F++L+WPVRT+SFSH G +ASA
Sbjct: 225 SNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASA 284
Query: 231 SEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKN-KYQA--DEGVFRI 287
SED FIDI+ V TG + ++ C + +V W+PK LLA+A DDK+ KY + + G ++
Sbjct: 285 SEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKL 344
Query: 288 YGFEN 292
+G N
Sbjct: 345 FGLPN 349
Score = 106 (42.4 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 29/129 (22%), Positives = 57/129 (44%)
Query: 16 YTGHKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
Y GH V + W+ + L + S D+T R+W + + + +G ++++ +CW
Sbjct: 95 YRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKC--IATVNTKG--ENIN-ICW 149
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTI 134
P IA + D V DA++ + + + E I++ D + N + + I
Sbjct: 150 SPD-GQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI 208
Query: 135 LDVRKFKPI 143
L + KP+
Sbjct: 209 LSYPELKPV 217
>UNIPROTKB|Q96J01 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IDA] [GO:0000346
"transcription export complex" evidence=IDA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
KO:K12880 GO:GO:0003723 GO:GO:0000346 GO:GO:0046784 CTD:84321
HOVERGEN:HBG059732 InterPro:IPR011659 Pfam:PF07676 EMBL:AC138965
EMBL:BC006849 EMBL:BC068499 IPI:IPI00063729 RefSeq:NP_115737.1
UniGene:Hs.484227 UniGene:Hs.715943 ProteinModelPortal:Q96J01
SMR:Q96J01 IntAct:Q96J01 STRING:Q96J01 PhosphoSite:Q96J01
DMDM:48474597 PaxDb:Q96J01 PRIDE:Q96J01 DNASU:84321
Ensembl:ENST00000265097 GeneID:84321 KEGG:hsa:84321 UCSC:uc003mdg.4
GeneCards:GC05M175344 HGNC:HGNC:19072 HPA:HPA042764 HPA:HPA044009
HPA:HPA045071 MIM:606929 neXtProt:NX_Q96J01 PharmGKB:PA134893535
HOGENOM:HOG000264781 InParanoid:Q96J01 OMA:LAYACDD
OrthoDB:EOG49ZXPJ PhylomeDB:Q96J01 ChiTaRS:THOC3 GenomeRNAi:84321
NextBio:74048 ArrayExpress:Q96J01 Bgee:Q96J01 CleanEx:HS_THOC3
Genevestigator:Q96J01 GermOnline:ENSG00000051596 Uniprot:Q96J01
Length = 351
Score = 456 (165.6 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 88/168 (52%), Positives = 109/168 (64%)
Query: 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
+RE+ H KVHSVAW+C G +LASGS D+TA V+ +E VK+ RGH DSVDQL
Sbjct: 48 TREFLAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDR--LVKENNYRGHGDSVDQL 105
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
CW P + DL TASGDKT+R+WD R+ KC GENINI + PDG IAVGN+DD +
Sbjct: 106 CWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVV 165
Query: 133 TILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDP 180
T +D + + +F +EVNEI+WN MFFLT GN GC I P
Sbjct: 166 TFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGN-GCINILSYP 212
Score = 362 (132.5 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 66/125 (52%), Positives = 91/125 (72%)
Query: 171 AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA 230
+ C CI DPMG+YFA GSAD+LVSLWD+ E++CVR F++L+WPVRT+SFSH G +ASA
Sbjct: 225 SNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASA 284
Query: 231 SEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKN-KYQA--DEGVFRI 287
SED FIDI+ V TG + ++ C + +V W+PK LLA+A DDK+ KY + + G ++
Sbjct: 285 SEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKL 344
Query: 288 YGFEN 292
+G N
Sbjct: 345 FGLPN 349
Score = 106 (42.4 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 29/129 (22%), Positives = 57/129 (44%)
Query: 16 YTGHKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
Y GH V + W+ + L + S D+T R+W + + + +G ++++ +CW
Sbjct: 95 YRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKC--IATVNTKG--ENIN-ICW 149
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTI 134
P IA + D V DA++ + + + E I++ D + N + + I
Sbjct: 150 SPD-GQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI 208
Query: 135 LDVRKFKPI 143
L + KP+
Sbjct: 209 LSYPELKPV 217
>UNIPROTKB|F1S386 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:CU993810 RefSeq:XP_003123712.1
Ensembl:ENSSSCT00000015360 GeneID:100524425 KEGG:ssc:100524425
Uniprot:F1S386
Length = 351
Score = 456 (165.6 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 88/168 (52%), Positives = 109/168 (64%)
Query: 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
+RE+ H KVHSVAW+C G +LASGS D+TA V+ +E VK+ RGH DSVDQL
Sbjct: 48 TREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDR--LVKENNYRGHGDSVDQL 105
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
CW P + DL TASGDKT+R+WD R+ KC GENINI + PDG IAVGN+DD +
Sbjct: 106 CWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVV 165
Query: 133 TILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDP 180
T +D + + +F +EVNEI+WN MFFLT GN GC I P
Sbjct: 166 TFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGN-GCINILSYP 212
Score = 362 (132.5 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 66/125 (52%), Positives = 91/125 (72%)
Query: 171 AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA 230
+ C CI DPMG+YFA GSAD+LVSLWD+ E++CVR F++L+WPVRT+SFSH G +ASA
Sbjct: 225 SNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASA 284
Query: 231 SEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKN-KYQA--DEGVFRI 287
SED FIDI+ V TG + ++ C + +V W+PK LLA+A DDK+ KY + + G ++
Sbjct: 285 SEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKL 344
Query: 288 YGFEN 292
+G N
Sbjct: 345 FGLPN 349
Score = 106 (42.4 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 29/129 (22%), Positives = 57/129 (44%)
Query: 16 YTGHKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
Y GH V + W+ + L + S D+T R+W + + + +G ++++ +CW
Sbjct: 95 YRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKC--IATVNTKG--ENIN-ICW 149
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTI 134
P IA + D V DA++ + + + E I++ D + N + + I
Sbjct: 150 SPD-GQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI 208
Query: 135 LDVRKFKPI 143
L + KP+
Sbjct: 209 LSYPELKPV 217
>MGI|MGI:1920916 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10090 "Mus musculus"
[GO:0000346 "transcription export complex" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=ISO]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1920916 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 KO:K12880
GO:GO:0003723 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:AK010668 EMBL:BC019603 IPI:IPI00311904
RefSeq:NP_082873.2 UniGene:Mm.292487 ProteinModelPortal:Q8VE80
SMR:Q8VE80 PhosphoSite:Q8VE80 PaxDb:Q8VE80 PRIDE:Q8VE80
Ensembl:ENSMUST00000026990 GeneID:73666 KEGG:mmu:73666
UCSC:uc007qod.2 InParanoid:Q8VE80 NextBio:338741 Bgee:Q8VE80
CleanEx:MM_THOC3 Genevestigator:Q8VE80
GermOnline:ENSMUSG00000025872 Uniprot:Q8VE80
Length = 351
Score = 456 (165.6 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 88/168 (52%), Positives = 109/168 (64%)
Query: 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
+RE+ H KVHSVAW+C G +LASGS D+TA V+ +E VK+ RGH DSVDQL
Sbjct: 48 TREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDR--LVKENNYRGHGDSVDQL 105
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
CW P + DL TASGDKT+R+WD R+ KC GENINI + PDG IAVGN+DD +
Sbjct: 106 CWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVV 165
Query: 133 TILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDP 180
T +D + + +F +EVNEI+WN MFFLT GN GC I P
Sbjct: 166 TFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGN-GCINILSYP 212
Score = 362 (132.5 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 66/125 (52%), Positives = 91/125 (72%)
Query: 171 AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA 230
+ C CI DPMG+YFA GSAD+LVSLWD+ E++CVR F++L+WPVRT+SFSH G +ASA
Sbjct: 225 SNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASA 284
Query: 231 SEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKN-KYQA--DEGVFRI 287
SED FIDI+ V TG + ++ C + +V W+PK LLA+A DDK+ KY + + G ++
Sbjct: 285 SEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKL 344
Query: 288 YGFEN 292
+G N
Sbjct: 345 FGLPN 349
Score = 106 (42.4 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 29/129 (22%), Positives = 57/129 (44%)
Query: 16 YTGHKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
Y GH V + W+ + L + S D+T R+W + + + +G ++++ +CW
Sbjct: 95 YRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKC--IATVNTKG--ENIN-ICW 149
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTI 134
P IA + D V DA++ + + + E I++ D + N + + I
Sbjct: 150 SPD-GQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI 208
Query: 135 LDVRKFKPI 143
L + KP+
Sbjct: 209 LSYPELKPV 217
>RGD|1311669 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10116 "Rattus norvegicus"
[GO:0000346 "transcription export complex" evidence=IEA;ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311669 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 EMBL:CH474032
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BC168852 IPI:IPI00364620
RefSeq:NP_001099529.1 UniGene:Rn.101956 STRING:B5DEY5
Ensembl:ENSRNOT00000000116 GeneID:290519 KEGG:rno:290519
UCSC:RGD:1311669 NextBio:631152 Genevestigator:B5DEY5
Uniprot:B5DEY5
Length = 351
Score = 456 (165.6 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 88/168 (52%), Positives = 109/168 (64%)
Query: 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
+RE+ H KVHSVAW+C G +LASGS D+TA V+ +E VK+ RGH DSVDQL
Sbjct: 48 TREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDR--LVKENNYRGHGDSVDQL 105
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
CW P + DL TASGDKT+R+WD R+ KC GENINI + PDG IAVGN+DD +
Sbjct: 106 CWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVV 165
Query: 133 TILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDP 180
T +D + + +F +EVNEI+WN MFFLT GN GC I P
Sbjct: 166 TFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGN-GCINILSYP 212
Score = 362 (132.5 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 66/125 (52%), Positives = 91/125 (72%)
Query: 171 AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA 230
+ C CI DPMG+YFA GSAD+LVSLWD+ E++CVR F++L+WPVRT+SFSH G +ASA
Sbjct: 225 SNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASA 284
Query: 231 SEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKN-KYQA--DEGVFRI 287
SED FIDI+ V TG + ++ C + +V W+PK LLA+A DDK+ KY + + G ++
Sbjct: 285 SEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKL 344
Query: 288 YGFEN 292
+G N
Sbjct: 345 FGLPN 349
Score = 106 (42.4 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 29/129 (22%), Positives = 57/129 (44%)
Query: 16 YTGHKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
Y GH V + W+ + L + S D+T R+W + + + +G ++++ +CW
Sbjct: 95 YRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKC--IATVNTKG--ENIN-ICW 149
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTI 134
P IA + D V DA++ + + + E I++ D + N + + I
Sbjct: 150 SPD-GQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI 208
Query: 135 LDVRKFKPI 143
L + KP+
Sbjct: 209 LSYPELKPV 217
>FB|FBgn0037569 [details] [associations]
symbol:tex "tex" species:7227 "Drosophila melanogaster"
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR011659
Pfam:PF07676 EMBL:AY118857 ProteinModelPortal:Q8MSF3 SMR:Q8MSF3
STRING:Q8MSF3 PaxDb:Q8MSF3 PRIDE:Q8MSF3 FlyBase:FBgn0037569
InParanoid:Q8MSF3 OrthoDB:EOG4FJ6RC ArrayExpress:Q8MSF3 Bgee:Q8MSF3
Uniprot:Q8MSF3
Length = 320
Score = 411 (149.7 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 87/171 (50%), Positives = 102/171 (59%)
Query: 12 HS--REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
HS RE H KVHSV WN G LASGS D+T V+ +E +K RGH SV
Sbjct: 18 HSKIREQRSHMSKVHSVCWNADGRYLASGSFDKTVVVYSLERDRF--LKGNTYRGHTASV 75
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
DQLCW + D ATASGDKTVR+WD R GKC GENINI + PDG IAVGN++
Sbjct: 76 DQLCWHRTNPDQFATASGDKTVRIWDIRVGKCVSVTNTKGENINIAWSPDGKTIAVGNKE 135
Query: 130 DELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDP 180
D +T +D R K F +EVNEI+WN T ++FFLT G GC I P
Sbjct: 136 DLITFIDTRTNKIRVEEPFSFEVNEISWNNTNDLFFLTNG-LGCMHILSYP 185
Score = 322 (118.4 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 66/121 (54%), Positives = 80/121 (66%)
Query: 171 AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA 230
A C CI P G+YFA GSAD+ VSLWD +E+ C+R ++LEWPVRTISFSH IA A
Sbjct: 198 ANCICIEFGPTGKYFATGSADAQVSLWDANELACLRMISRLEWPVRTISFSHDERMIALA 257
Query: 231 SEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDK-NKYQADEGVFRIYG 289
SEDL IDI+ TG V I A+ +V W+PK LLAYA D+K N + D G +IYG
Sbjct: 258 SEDLIIDIAFTETGERVTDILVDASTFTVAWHPKQYLLAYACDEKDNDRRRDAGNVKIYG 317
Query: 290 F 290
F
Sbjct: 318 F 318
Score = 84 (34.6 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 26/107 (24%), Positives = 45/107 (42%)
Query: 11 LHSREYTGHKKKVHSVAWNCTGT-KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
L Y GH V + W+ T + A+ S D+T R+W I GK + +++
Sbjct: 63 LKGNTYRGHTASVDQLCWHRTNPDQFATASGDKTVRIWDIRV---GKCVSVT-NTKGENI 118
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITY 116
+ + W P IA + + + D R+ K + S E I++
Sbjct: 119 N-IAWSPD-GKTIAVGNKEDLITFIDTRTNKIRVEEPFSFEVNEISW 163
>UNIPROTKB|E1BDF6 [details] [associations]
symbol:E1BDF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 IPI:IPI00732803 OMA:LAYACDD
EMBL:DAAA02027701 EMBL:DAAA02027702 EMBL:DAAA02027703
ProteinModelPortal:E1BDF6 Ensembl:ENSBTAT00000049661 Uniprot:E1BDF6
Length = 351
Score = 362 (132.5 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 66/125 (52%), Positives = 91/125 (72%)
Query: 171 AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA 230
+ C CI DPMG+YFA GSAD+LVSLWD+ E++CVR F++L+WPVRT+SFSH G +ASA
Sbjct: 225 SNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASA 284
Query: 231 SEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKN-KYQA--DEGVFRI 287
SED FIDI+ V TG + ++ C + +V W+PK LLA+A DDK+ KY + + G ++
Sbjct: 285 SEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKL 344
Query: 288 YGFEN 292
+G N
Sbjct: 345 FGLPN 349
Score = 328 (120.5 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 62/145 (42%), Positives = 86/145 (59%)
Query: 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
+RE+ H KVHSVAW+C G +LASGS D+TA V+ +E VK+ RGH DSVDQL
Sbjct: 48 TREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDR--LVKENNYRGHGDSVDQL 105
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
CW P + DL TASGDKT+R+WD R+ KC G + ++P+G I ++DD L
Sbjct: 106 CWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGNCSELCWEPEGQTIDCNSKDDLL 165
Query: 133 TILDVRKFKPIHRRKFGYEVNEIAW 157
LD ++ +F ++ + W
Sbjct: 166 LFLDAGDYRMTGEGQFSFQSQIVKW 190
Score = 65 (27.9 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 26/114 (22%), Positives = 47/114 (41%)
Query: 53 GHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG--E 110
GH K + E H+ V + W L A+ S DKT ++ + ++ G +
Sbjct: 44 GHSKTR--EFPAHSAKVHSVAWSCDGRRL-ASGSFDKTASVFLLEKDRLVKENNYRGHGD 100
Query: 111 NIN-ITYKPDGTHIAV-GNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGE 162
+++ + + P + V + D + I DVR K I +E+ W G+
Sbjct: 101 SVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGNCSELCWEPEGQ 154
Score = 50 (22.7 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 11/58 (18%), Positives = 28/58 (48%)
Query: 113 NITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF---GYEVNEIAWNMTGEMFFLT 167
++ + DG +A G+ D ++ + K + + + G V+++ W+ + F+T
Sbjct: 60 SVAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVT 117
>POMBASE|SPCC18B5.10c [details] [associations]
symbol:SPCC18B5.10c "TREX complex subunit Tex1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000346
"transcription export complex" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0006406 "mRNA export from
nucleus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPCC18B5.10c Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 EMBL:CU329672 eggNOG:COG2319
KO:K12880 GO:GO:0006406 GO:GO:0000346 InterPro:IPR013979
Pfam:PF08662 OrthoDB:EOG43V34X HOGENOM:HOG000264781 OMA:LAYACDD
PIR:T41203 RefSeq:NP_587940.1 ProteinModelPortal:Q9USL1
STRING:Q9USL1 EnsemblFungi:SPCC18B5.10c.1 GeneID:2539362
KEGG:spo:SPCC18B5.10c NextBio:20800527 Uniprot:Q9USL1
Length = 309
Score = 285 (105.4 bits), Expect = 6.1e-52, Sum P(2) = 6.1e-52
Identities = 47/125 (37%), Positives = 79/125 (63%)
Query: 152 VNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 211
V + W ++ + N+ C+CI P R+ A+G AD++ SLWD E++C R+ T++
Sbjct: 176 VQIMEWPSLKRVYDIKAHNSNCFCIEFSPDNRHLAIGGADAITSLWDPQELICERSITRM 235
Query: 212 EWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYA 271
++P+RT+SFS+ Y+AS SED ++DI++ TG + +IP +N V W+P ++LAYA
Sbjct: 236 DYPIRTLSFSYDSRYLASGSEDRYVDIADTKTGDQIWKIPTNGPLNKVAWHPTKHILAYA 295
Query: 272 GDDKN 276
+ N
Sbjct: 296 VSEPN 300
Score = 271 (100.5 bits), Expect = 6.1e-52, Sum P(2) = 6.1e-52
Identities = 55/166 (33%), Positives = 90/166 (54%)
Query: 5 SIP-FKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR 63
S+P F L +R+ G + + S+ WN +G++LAS S + VW+ + ++ R
Sbjct: 8 SLPKFPELKTRDLQGQQGPIRSLGWNLSGSRLASSSSSGSVLVWNSDRLDFKFTTELGNR 67
Query: 64 GHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHI 123
G+ V+QL WDP H+D + K +R WD RS K + E + ENI T+ P G +
Sbjct: 68 GYG-LVEQLVWDPTHSDRLMAVYAGKMIRFWDFRSAKPIAEIESNYENIYATWSPSGNYC 126
Query: 124 AVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTG 169
+RDD L+ +D R+ + + + E NE W+ + ++FF+TTG
Sbjct: 127 CASSRDDMLSFIDARERRIMETFQQPCETNECCWSFSEDLFFMTTG 172
>DICTYBASE|DDB_G0276031 [details] [associations]
symbol:DDB_G0276031 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276031
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAFI02000014 EMBL:X16524 PIR:S05357 RefSeq:XP_643326.1
ProteinModelPortal:P14197 STRING:P14197 EnsemblProtists:DDB0185151
GeneID:8620373 GenomeReviews:CM000151_GR KEGG:ddi:DDB_G0276031
KO:K12880 OMA:YAPEINE ProtClustDB:CLSZ2430924 Uniprot:P14197
Length = 478
Score = 282 (104.3 bits), Expect = 9.3e-35, Sum P(2) = 9.3e-35
Identities = 71/229 (31%), Positives = 124/229 (54%)
Query: 65 HADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHI 123
+++++D + W P I + D + L D + K + + +GE +N + + +G I
Sbjct: 270 NSENID-VRWSPD-GQFIVACTRDDHLALIDLPTIKTLKIYKFNGEELNQVGWDNNGDLI 327
Query: 124 AVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGR 183
+ N + ++ KF P K V + + G A YC+ DP G+
Sbjct: 328 LMAN---SMGNIEAYKFLP----KSTTHVKHLK-TLYGH-------TASIYCMEFDPTGK 372
Query: 184 YFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHT 243
Y A GSADS+VSLWDI +M+CV+TF K +P R++SFS G +IA++S + I+I ++ +
Sbjct: 373 YLAAGSADSIVSLWDIEDMMCVKTFIKSTFPCRSVSFSFDGQFIAASSFESTIEIFHIES 432
Query: 244 GRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 292
+ +H I C + ++S+ W+P LLAYA + N+ D + R++G+ +
Sbjct: 433 SQPIHTIEC-SGVSSLMWHPTLPLLAYA-PEINENNKDPSI-RVFGYHS 478
Score = 247 (92.0 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 44/125 (35%), Positives = 74/125 (59%)
Query: 54 HGKVKD-IELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI 112
+ +K+ IEL+GH S++++ W PK+ DL+A+A DK +++WD + GKC + ENI
Sbjct: 215 NNNIKETIELKGHDGSIEKISWSPKNNDLLASAGTDKVIKIWDVKIGKCIGTVSTNSENI 274
Query: 113 NITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTT--G 169
++ + PDG I RDD L ++D+ K + KF G E+N++ W+ G++ + G
Sbjct: 275 DVRWSPDGQFIVACTRDDHLALIDLPTIKTLKIYKFNGEELNQVGWDNNGDLILMANSMG 334
Query: 170 NAGCY 174
N Y
Sbjct: 335 NIEAY 339
Score = 119 (46.9 bits), Expect = 9.3e-35, Sum P(2) = 9.3e-35
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 8 FKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGH 54
F ++++ G+KKK SVAWN GTK+AS D RVW+ +P G+
Sbjct: 153 FSECSTKDFIGNKKKSTSVAWNANGTKIASSGSDGIVRVWNFDPLGN 199
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 163 (62.4 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 7 PFKNLHSREYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRG 64
P K ++ ++T GH K V SV ++ G LAS S D+ ++W GK + + G
Sbjct: 4 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKT-ISG 59
Query: 65 HADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINI---TYKPDGT 121
H + + W ++L+ +AS DKT+++WD SGKC + L G + + + P
Sbjct: 60 HKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSN 116
Query: 122 HIAVGNRDDELTILDVRKFKPIHRRKFGYE-VNEIAWNMTGEMFFLTTGNAGC 173
I G+ D+ + I DV+ K + + V+ + +N G + ++ + C
Sbjct: 117 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 169
Score = 137 (53.3 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 55/217 (25%), Positives = 96/217 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V +N + SGS D++ R+W ++ GK L H+D V + ++ +
Sbjct: 101 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT---GKCLKT-LPAHSDPVSAVHFN-R 155
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINITY---KPDGTHIAVGNRDDELTI 134
LI ++S D R+WD SG+C + + +N +++ P+G +I D+ L +
Sbjct: 156 DGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKL 214
Query: 135 LDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLV 194
D K K + + G++ NE F TG G++ GS D+LV
Sbjct: 215 WDYSKGKCL-KTYTGHK-NEKYCIFAN---FSVTG------------GKWIVSGSEDNLV 257
Query: 195 SLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASAS 231
+W++ V+ V + + T + IASA+
Sbjct: 258 YIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 294
Score = 115 (45.5 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT--KLEWPVRTISFSHTGD-YIASASE 232
+ P G+Y + D+ + LWD S+ C++T+T K E +FS TG +I S SE
Sbjct: 194 VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE 253
Query: 233 DLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKNK 277
D + I N+ T V ++ + S +P N++A A + +K
Sbjct: 254 DNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 299
Score = 70 (29.7 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP-VRTISFSHTGDYIASASEDLFIDISN 240
G S D L +WD + C++T + P V + FS G YI +A+ D + + +
Sbjct: 157 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 216
Query: 241 VHTGR 245
G+
Sbjct: 217 YSKGK 221
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 163 (62.4 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 7 PFKNLHSREYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRG 64
P K ++ ++T GH K V SV ++ G LAS S D+ ++W GK + + G
Sbjct: 30 PVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKT-ISG 85
Query: 65 HADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINI---TYKPDGT 121
H + + W ++L+ +AS DKT+++WD SGKC + L G + + + P
Sbjct: 86 HKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSN 142
Query: 122 HIAVGNRDDELTILDVRKFKPIHRRKFGYE-VNEIAWNMTGEMFFLTTGNAGC 173
I G+ D+ + I DV+ K + + V+ + +N G + ++ + C
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Score = 136 (52.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 54/217 (24%), Positives = 94/217 (43%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V +N + SGS D++ R+W ++ GK L H+D V + ++ +
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT---GKCLKT-LPAHSDPVSAVHFN-R 181
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINITY---KPDGTHIAVGNRDDELTI 134
LI ++S D R+WD SG+C + + +N +++ P+G +I D+ L +
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 135 LDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLV 194
D K K + + + NE F TG G++ GS D+LV
Sbjct: 241 WDYSKGKCL--KTYTCHKNEKYCIFAN---FSVTG------------GKWIVSGSEDNLV 283
Query: 195 SLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASAS 231
+W++ V+ V + + T + IASA+
Sbjct: 284 YIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAA 320
Score = 116 (45.9 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT--KLEWPVRTISFSHTGD-YIASASE 232
+ P G+Y + D+ + LWD S+ C++T+T K E +FS TG +I S SE
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSE 279
Query: 233 DLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKNK 277
D + I N+ T V ++ + S +P N++A A + +K
Sbjct: 280 DNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDK 325
Score = 75 (31.5 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 19/72 (26%), Positives = 32/72 (44%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP-VRTISFSHTGDYIASASEDLFIDISN 240
G S D L +WD + C++T + P V + FS G YI +A+ D + + +
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Query: 241 VHTGRTVHQIPC 252
G+ + C
Sbjct: 243 YSKGKCLKTYTC 254
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 163 (62.4 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 7 PFKNLHSREYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRG 64
P K ++ ++T GH K V SV ++ G LAS S D+ ++W GK + + G
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKT-ISG 85
Query: 65 HADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINI---TYKPDGT 121
H + + W ++L+ +AS DKT+++WD SGKC + L G + + + P
Sbjct: 86 HKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSN 142
Query: 122 HIAVGNRDDELTILDVRKFKPIHRRKFGYE-VNEIAWNMTGEMFFLTTGNAGC 173
I G+ D+ + I DV+ K + + V+ + +N G + ++ + C
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 55/217 (25%), Positives = 96/217 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V +N + SGS D++ R+W ++ GK L H+D V + ++ +
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT---GKCLKT-LPAHSDPVSAVHFN-R 181
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINITY---KPDGTHIAVGNRDDELTI 134
LI ++S D R+WD SG+C + + +N +++ P+G +I D+ L +
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 135 LDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLV 194
D K K + + G++ NE F TG G++ GS D+LV
Sbjct: 241 WDYSKGKCL-KTYTGHK-NEKYCIFAN---FSVTG------------GKWIVSGSEDNLV 283
Query: 195 SLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASAS 231
+W++ V+ V + + T + IASA+
Sbjct: 284 YIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320
Score = 115 (45.5 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT--KLEWPVRTISFSHTGD-YIASASE 232
+ P G+Y + D+ + LWD S+ C++T+T K E +FS TG +I S SE
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE 279
Query: 233 DLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKNK 277
D + I N+ T V ++ + S +P N++A A + +K
Sbjct: 280 DNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 325
Score = 70 (29.7 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP-VRTISFSHTGDYIASASEDLFIDISN 240
G S D L +WD + C++T + P V + FS G YI +A+ D + + +
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Query: 241 VHTGR 245
G+
Sbjct: 243 YSKGK 247
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 163 (62.4 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 7 PFKNLHSREYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRG 64
P K ++ ++T GH K V SV ++ G LAS S D+ ++W GK + + G
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKT-ISG 85
Query: 65 HADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINI---TYKPDGT 121
H + + W ++L+ +AS DKT+++WD SGKC + L G + + + P
Sbjct: 86 HKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSN 142
Query: 122 HIAVGNRDDELTILDVRKFKPIHRRKFGYE-VNEIAWNMTGEMFFLTTGNAGC 173
I G+ D+ + I DV+ K + + V+ + +N G + ++ + C
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 55/217 (25%), Positives = 96/217 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V +N + SGS D++ R+W ++ GK L H+D V + ++ +
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT---GKCLKT-LPAHSDPVSAVHFN-R 181
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINITY---KPDGTHIAVGNRDDELTI 134
LI ++S D R+WD SG+C + + +N +++ P+G +I D+ L +
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 135 LDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLV 194
D K K + + G++ NE F TG G++ GS D+LV
Sbjct: 241 WDYSKGKCL-KTYTGHK-NEKYCIFAN---FSVTG------------GKWIVSGSEDNLV 283
Query: 195 SLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASAS 231
+W++ V+ V + + T + IASA+
Sbjct: 284 YIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320
Score = 115 (45.5 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT--KLEWPVRTISFSHTGD-YIASASE 232
+ P G+Y + D+ + LWD S+ C++T+T K E +FS TG +I S SE
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE 279
Query: 233 DLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKNK 277
D + I N+ T V ++ + S +P N++A A + +K
Sbjct: 280 DNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 325
Score = 70 (29.7 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP-VRTISFSHTGDYIASASEDLFIDISN 240
G S D L +WD + C++T + P V + FS G YI +A+ D + + +
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Query: 241 VHTGR 245
G+
Sbjct: 243 YSKGK 247
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 163 (62.4 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 7 PFKNLHSREYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRG 64
P K ++ ++T GH K V SV ++ G LAS S D+ ++W GK + + G
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKT-ISG 85
Query: 65 HADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINI---TYKPDGT 121
H + + W ++L+ +AS DKT+++WD SGKC + L G + + + P
Sbjct: 86 HKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSN 142
Query: 122 HIAVGNRDDELTILDVRKFKPIHRRKFGYE-VNEIAWNMTGEMFFLTTGNAGC 173
I G+ D+ + I DV+ K + + V+ + +N G + ++ + C
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 55/217 (25%), Positives = 96/217 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V +N + SGS D++ R+W ++ GK L H+D V + ++ +
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT---GKCLKT-LPAHSDPVSAVHFN-R 181
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINITY---KPDGTHIAVGNRDDELTI 134
LI ++S D R+WD SG+C + + +N +++ P+G +I D+ L +
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 135 LDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLV 194
D K K + + G++ NE F TG G++ GS D+LV
Sbjct: 241 WDYSKGKCL-KTYTGHK-NEKYCIFAN---FSVTG------------GKWIVSGSEDNLV 283
Query: 195 SLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASAS 231
+W++ V+ V + + T + IASA+
Sbjct: 284 YIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320
Score = 115 (45.5 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT--KLEWPVRTISFSHTGD-YIASASE 232
+ P G+Y + D+ + LWD S+ C++T+T K E +FS TG +I S SE
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE 279
Query: 233 DLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKNK 277
D + I N+ T V ++ + S +P N++A A + +K
Sbjct: 280 DNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 325
Score = 70 (29.7 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP-VRTISFSHTGDYIASASEDLFIDISN 240
G S D L +WD + C++T + P V + FS G YI +A+ D + + +
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Query: 241 VHTGR 245
G+
Sbjct: 243 YSKGK 247
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 163 (62.4 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 7 PFKNLHSREYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRG 64
P K ++ ++T GH K V SV ++ G LAS S D+ ++W GK + + G
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKT-ISG 85
Query: 65 HADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINI---TYKPDGT 121
H + + W ++L+ +AS DKT+++WD SGKC + L G + + + P
Sbjct: 86 HKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSN 142
Query: 122 HIAVGNRDDELTILDVRKFKPIHRRKFGYE-VNEIAWNMTGEMFFLTTGNAGC 173
I G+ D+ + I DV+ K + + V+ + +N G + ++ + C
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 55/217 (25%), Positives = 96/217 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V +N + SGS D++ R+W ++ GK L H+D V + ++ +
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT---GKCLKT-LPAHSDPVSAVHFN-R 181
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINITY---KPDGTHIAVGNRDDELTI 134
LI ++S D R+WD SG+C + + +N +++ P+G +I D+ L +
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 135 LDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLV 194
D K K + + G++ NE F TG G++ GS D+LV
Sbjct: 241 WDYSKGKCL-KTYTGHK-NEKYCIFAN---FSVTG------------GKWIVSGSEDNLV 283
Query: 195 SLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASAS 231
+W++ V+ V + + T + IASA+
Sbjct: 284 YIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320
Score = 115 (45.5 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT--KLEWPVRTISFSHTGD-YIASASE 232
+ P G+Y + D+ + LWD S+ C++T+T K E +FS TG +I S SE
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE 279
Query: 233 DLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKNK 277
D + I N+ T V ++ + S +P N++A A + +K
Sbjct: 280 DNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 325
Score = 70 (29.7 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP-VRTISFSHTGDYIASASEDLFIDISN 240
G S D L +WD + C++T + P V + FS G YI +A+ D + + +
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Query: 241 VHTGR 245
G+
Sbjct: 243 YSKGK 247
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 163 (62.4 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 7 PFKNLHSREYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRG 64
P K ++ ++T GH K V SV ++ G LAS S D+ ++W GK + + G
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKT-ISG 85
Query: 65 HADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINI---TYKPDGT 121
H + + W ++L+ +AS DKT+++WD SGKC + L G + + + P
Sbjct: 86 HKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSN 142
Query: 122 HIAVGNRDDELTILDVRKFKPIHRRKFGYE-VNEIAWNMTGEMFFLTTGNAGC 173
I G+ D+ + I DV+ K + + V+ + +N G + ++ + C
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 55/217 (25%), Positives = 96/217 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V +N + SGS D++ R+W ++ GK L H+D V + ++ +
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT---GKCLKT-LPAHSDPVSAVHFN-R 181
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINITY---KPDGTHIAVGNRDDELTI 134
LI ++S D R+WD SG+C + + +N +++ P+G +I D+ L +
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 135 LDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLV 194
D K K + + G++ NE F TG G++ GS D+LV
Sbjct: 241 WDYSKGKCL-KTYTGHK-NEKYCIFAN---FSVTG------------GKWIVSGSEDNLV 283
Query: 195 SLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASAS 231
+W++ V+ V + + T + IASA+
Sbjct: 284 YIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320
Score = 115 (45.5 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT--KLEWPVRTISFSHTGD-YIASASE 232
+ P G+Y + D+ + LWD S+ C++T+T K E +FS TG +I S SE
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE 279
Query: 233 DLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKNK 277
D + I N+ T V ++ + S +P N++A A + +K
Sbjct: 280 DNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 325
Score = 70 (29.7 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP-VRTISFSHTGDYIASASEDLFIDISN 240
G S D L +WD + C++T + P V + FS G YI +A+ D + + +
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Query: 241 VHTGR 245
G+
Sbjct: 243 YSKGK 247
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 170 (64.9 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 44/140 (31%), Positives = 77/140 (55%)
Query: 9 KNLHSREYTGHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHAD 67
+ LH+ E GH+ V+++A+N G K+A+GS D+T ++W E GK RGH
Sbjct: 125 EELHTLE--GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAET---GKCYHT-FRGHTA 178
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG---ENINITYKPDGTHIA 124
+ L ++P+ + ++AT S D T +LWD +SG+ + L+G E I++++ G I
Sbjct: 179 EIVCLSFNPQ-STVVATGSMDTTAKLWDIQSGE--EVVTLTGHLAEIISLSFDTSGDRII 235
Query: 125 VGNRDDELTILDVRKFKPIH 144
G+ D + + D + +H
Sbjct: 236 TGSFDHTVVVWDASTGRKVH 255
Score = 153 (58.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 47/161 (29%), Positives = 78/161 (48%)
Query: 18 GHKKKVHSV--AWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75
GH ++ S +W+C+ + +GS+D+T +W GK L GH D + C+D
Sbjct: 259 GHCAEISSALFSWDCS--LILTGSMDKTCMLWDATS---GKCV-ATLTGHDDEILDSCFD 312
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTI 134
LIATAS D T R+++A + KC + E GE I++ P G + G+ D I
Sbjct: 313 YT-GKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARI 371
Query: 135 LDVRKFKPIHRRKFGY--EVNEIAWNMTGEMFFLTTGNAGC 173
DV+ + + + G+ E+ A+N G + + + C
Sbjct: 372 WDVQTGQCLQVLE-GHTDEIFSCAFNYKGNIVITGSKDNSC 411
Score = 152 (58.6 bits), Expect = 8.2e-15, Sum P(2) = 8.2e-15
Identities = 51/194 (26%), Positives = 94/194 (48%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
H + +VA N G+ +GS D+T +VW G ++ +E GH + V + ++ +
Sbjct: 91 HILPLTNVALNKAGSCFITGSYDRTCKVWDTAS-GE-ELHTLE--GHRNVVYAIAFNNPY 146
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDV 137
D IAT S DKT +LW A +GKC + E + +++ P T +A G+ D + D+
Sbjct: 147 GDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDI 206
Query: 138 RKFKPIHRRKFGY--EVNEIAWNMTGEMFFLTTGNAGCYCIAIDPM-GR--YFAVGSADS 192
+ + + G+ E+ ++++ +G+ + TG+ + D GR + +G
Sbjct: 207 QSGEEVVTLT-GHLAEIISLSFDTSGDR--IITGSFDHTVVVWDASTGRKVHTLIGHCAE 263
Query: 193 LVSL---WDISEML 203
+ S WD S +L
Sbjct: 264 ISSALFSWDCSLIL 277
Score = 150 (57.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 51/162 (31%), Positives = 80/162 (49%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQ--LCW 74
TGH ++ S++++ +G ++ +GS D T VW G+ K L GH + W
Sbjct: 216 TGHLAEIISLSFDTSGDRIITGSFDHTVVVWDAST---GR-KVHTLIGHCAEISSALFSW 271
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSG---ENINITYKPDGTHIAVGNRDDE 131
D LI T S DKT LWDA SGKC A L+G E ++ + G IA + D
Sbjct: 272 D---CSLILTGSMDKTCMLWDATSGKCV--ATLTGHDDEILDSCFDYTGKLIATASADGT 326
Query: 132 LTILDVRKFKPIHRRKFGYE--VNEIAWNMTGEMFFLTTGNA 171
+ + K I + + G+E +++I++N G L TG++
Sbjct: 327 ARVYNATTRKCITKLE-GHEGEISKISFNPQGNR--LLTGSS 365
Score = 144 (55.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 36/120 (30%), Positives = 63/120 (52%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI-ELRGHADSVDQLCWD 75
TGH ++ ++ TG +A+ S D TARV++ K I +L GH + ++ ++
Sbjct: 300 TGHDDEILDSCFDYTGKLIATASADGTARVYNATTR-----KCITKLEGHEGEISKISFN 354
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTI 134
P+ L+ T S DKT R+WD ++G+C Q E + I + + G + G++D+ I
Sbjct: 355 PQGNRLL-TGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRI 413
Score = 126 (49.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 44/161 (27%), Positives = 80/161 (49%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75
+ GH ++ +++N T +A+GS+D TA++W I+ G+ + + L GH + L +D
Sbjct: 173 FRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQS---GE-EVVTLTGHLAEIISLSFD 228
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT---YKPDGTHIAVGNRDDEL 132
D I T S D TV +WDA +G+ + L G I+ + D + I G+ D
Sbjct: 229 TS-GDRIITGSFDHTVVVWDASTGR--KVHTLIGHCAEISSALFSWDCSLILTGSMDKTC 285
Query: 133 TILDVRKFKPIHRRKFGY--EVNEIAWNMTGEMFFLTTGNA 171
+ D K + G+ E+ + ++ TG++ + T +A
Sbjct: 286 MLWDATSGKCVATLT-GHDDEILDSCFDYTGKL--IATASA 323
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 23/77 (29%), Positives = 45/77 (58%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH+ ++ +++N G +L +GS D+TAR+W ++ G+ + L GH D + ++ K
Sbjct: 343 GHEGEISKISFNPQGNRLLTGSSDKTARIWDVQT---GQCLQV-LEGHTDEIFSCAFNYK 398
Query: 78 HADLIATASGDKTVRLW 94
+++ T S D + R+W
Sbjct: 399 -GNIVITGSKDNSCRIW 414
Score = 115 (45.5 bits), Expect = 0.00051, P = 0.00051
Identities = 30/96 (31%), Positives = 47/96 (48%)
Query: 157 WNM-TGEMFFLTTGN-AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+ TG+ + G+ A C++ +P A GS D+ LWDI V T T
Sbjct: 162 WSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAE 221
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQI 250
+ ++SF +GD I + S D + + + TGR VH +
Sbjct: 222 IISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTL 257
Score = 101 (40.6 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 26/89 (29%), Positives = 41/89 (46%)
Query: 188 GSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTV 247
GS D LWD + CV T T + + F +TG IA+AS D + N T + +
Sbjct: 279 GSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCI 338
Query: 248 HQIPCRAA-MNSVEWNPKYNLLAYAGDDK 275
++ ++ + +NP+ N L DK
Sbjct: 339 TKLEGHEGEISKISFNPQGNRLLTGSSDK 367
Score = 77 (32.2 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 28/123 (22%), Positives = 51/123 (41%)
Query: 157 WNMT-GEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+ T G+ TG+ D G+ A SAD +++ + C+ E
Sbjct: 288 WDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGE 347
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGD 273
+ ISF+ G+ + + S D I +V TG+ + + + S +N K N++
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSK 407
Query: 274 DKN 276
D +
Sbjct: 408 DNS 410
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 159 (61.0 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 39/121 (32%), Positives = 66/121 (54%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GHK + VAW+ L SGS D+T +VW + GK L+GH++ V ++P
Sbjct: 111 SGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELST---GKSLKT-LKGHSNYVFCCNFNP 166
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
+ ++LI + S D++VR+WD R+GKC + + ++ + + DG+ I + D I
Sbjct: 167 Q-SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 225
Query: 136 D 136
D
Sbjct: 226 D 226
Score = 140 (54.3 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 44/177 (24%), Positives = 84/177 (47%)
Query: 3 ESSIPFKNLHSREYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI 60
+SS+ K ++ ++T GH K V +V ++ G LAS S D+ ++W GK +
Sbjct: 53 KSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKT 109
Query: 61 ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINI---TYK 117
+ GH + + W + L+ + S DKT+++W+ +GK + L G + + +
Sbjct: 110 -ISGHKLGISDVAWS-SDSRLLVSGSDDKTLKVWELSTGKSLKT--LKGHSNYVFCCNFN 165
Query: 118 PDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYE-VNEIAWNMTGEMFFLTTGNAGC 173
P I G+ D+ + I DVR K + + V+ + +N G + ++ + C
Sbjct: 166 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 222
Score = 135 (52.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 54/217 (24%), Positives = 94/217 (43%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V +N + SGS D++ R+W + GK L H+D V + ++ +
Sbjct: 154 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT---GKCLKT-LPAHSDPVSAVHFN-R 208
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINITY---KPDGTHIAVGNRDDELTI 134
LI ++S D R+WD SG+C + + +N +++ P+G +I D+ L +
Sbjct: 209 DGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKL 267
Query: 135 LDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLV 194
D K K + + G++ NE F TG G++ GS D++V
Sbjct: 268 WDYSKGKCL-KTYTGHK-NEKYCIFAN---FSVTG------------GKWIVSGSEDNMV 310
Query: 195 SLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASAS 231
+W++ V+ V + T + IASA+
Sbjct: 311 YIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAA 347
Score = 107 (42.7 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT--KLEWPVRTISFSHTGD-YIASASE 232
+ P G+Y + D+ + LWD S+ C++T+T K E +FS TG +I S SE
Sbjct: 247 VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE 306
Query: 233 DLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKNK 277
D + I N+ + V ++ + +P N++A A + +K
Sbjct: 307 DNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDK 352
Score = 70 (29.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP-VRTISFSHTGDYIASASEDLFIDISN 240
G S D L +WD + C++T + P V + FS G YI +A+ D + + +
Sbjct: 210 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 269
Query: 241 VHTGR 245
G+
Sbjct: 270 YSKGK 274
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 163 (62.4 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 49/167 (29%), Positives = 78/167 (46%)
Query: 6 IPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH 65
+P S + H V SV ++ G L + S D+T +VW + H + L H
Sbjct: 90 VPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTV----HRQKFLFSLSQH 145
Query: 66 ADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIA 124
+ V + P LIA+AS DKTV+LWD S +C E G ++ + P GT IA
Sbjct: 146 INWVRCARFSPD-GRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIA 204
Query: 125 VGNRDDELTILDVRKFKPI-HRRKFGYEVNEIAWNMTGEMFFLTTGN 170
D + + DVR + + H + VN ++++ +G + +T N
Sbjct: 205 AAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGN-YLITASN 250
Score = 141 (54.7 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 41/146 (28%), Positives = 76/146 (52%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R + GH+ + SV ++ +LASGS+D ++W ++P +++ L GH D+V +
Sbjct: 14 RHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKP----QMRAYCLVGHKDAVMCVQ 69
Query: 74 WDPKHADLIATASGDKTVRLW-DARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
+ P L+A+ S DKTV LW + G+ + + ++ + DG + + D+
Sbjct: 70 FSPS-GHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTAS--DDK 126
Query: 133 TILDVRKFKPIHRRKFGYEVNE-IAW 157
TI K +HR+KF + +++ I W
Sbjct: 127 TI----KVWTVHRQKFLFSLSQHINW 148
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 40/156 (25%), Positives = 76/156 (48%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI-ELRGHADSVDQLCWDPK 77
H V ++ G +AS S D+T ++W + + E G A+ V+ + P
Sbjct: 145 HINWVRCARFSPDGRLIASASDDKTVKLW--DKTSRECIHSFCEHGGFANHVE---FHPS 199
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILD 136
IA A DKTV++WD R + Q ++ +N +++ P G ++ + D L ILD
Sbjct: 200 -GTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILD 258
Query: 137 VRKFKPIHRRKFGYE--VNEIAWNMTGEMFFLTTGN 170
+ + + ++ G++ +A++ TG+ FF + G+
Sbjct: 259 LLEGRLLYTLH-GHQGPATCVAFSRTGD-FFASGGS 292
Score = 123 (48.4 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 35/122 (28%), Positives = 56/122 (45%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
C P GR A S D V LWD + C+ +F + + F +G IA+A D
Sbjct: 151 CARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDK 210
Query: 235 FIDISNVHTGRTV-HQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQAD--EG--VFRIYG 289
+ + +V R + H AA+NS+ ++P N L A +D D EG ++ ++G
Sbjct: 211 TVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHG 270
Query: 290 FE 291
+
Sbjct: 271 HQ 272
Score = 113 (44.8 bits), Expect = 0.00054, P = 0.00054
Identities = 34/122 (27%), Positives = 51/122 (41%)
Query: 157 WNMTGEM--FFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+M +M + L C+ P G A GS D V LW S F
Sbjct: 47 WSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTAT 106
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGD 273
VR++ FS G + +AS+D I + VH + + + + ++P L+A A D
Sbjct: 107 VRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASD 166
Query: 274 DK 275
DK
Sbjct: 167 DK 168
Score = 87 (35.7 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
++ P G Y S DS + + D+ E + T + P ++FS TGD+ AS D
Sbjct: 236 LSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSD 293
Score = 63 (27.2 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 159 MTGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLW 197
+ G + + G+ G C+A G +FA G +D V +W
Sbjct: 260 LEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 53/181 (29%), Positives = 82/181 (45%)
Query: 6 IPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH 65
IP S + H V SV + G L + S D+T +VW H + L H
Sbjct: 89 IPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST----HRQKFLFSLSQH 144
Query: 66 ADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIA 124
+ V + P LI +AS DKTV+LWD S +C E G + + P GT IA
Sbjct: 145 INWVRCARFSPD-GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 125 VGNRDDELTILDVRKFKPI-HRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPM-G 182
+ D+ + + DVR + + H + VN ++++ +G +L T ++ +D M G
Sbjct: 204 AASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGN--YLLTASSDSTLKILDLMEG 261
Query: 183 R 183
R
Sbjct: 262 R 262
Score = 146 (56.5 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 41/146 (28%), Positives = 71/146 (48%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R + GH+ + SV ++ +LASGS+D VWH++P GH D+V +
Sbjct: 13 RHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRA----YRFAGHKDAVTCVN 68
Query: 74 WDPKHADLIATASGDKTVRLWDAR-SGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
+ P L+A+ S DKTVR+W G+ + + ++ + DG + + D+
Sbjct: 69 FSPS-GHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTAS--DDK 125
Query: 133 TILDVRKFKPIHRRKFGYEVNE-IAW 157
T+ K HR+KF + +++ I W
Sbjct: 126 TV----KVWSTHRQKFLFSLSQHINW 147
Score = 121 (47.7 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 35/122 (28%), Positives = 56/122 (45%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
C P GR S D V LWD + CV ++ + V + F +G IA+AS D
Sbjct: 150 CARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDN 209
Query: 235 FIDISNVHTGRTVHQIPCR-AAMNSVEWNPKYNLLAYAGDDKNKYQAD--EG--VFRIYG 289
+ + +V T R + AA+N++ ++P N L A D D EG ++ ++G
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHG 269
Query: 290 FE 291
+
Sbjct: 270 HQ 271
Score = 99 (39.9 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 170 NAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIAS 229
+A ++ P G Y S+DS + + D+ E + T + P T++FS TG+Y AS
Sbjct: 229 SAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 288
Query: 230 ASED 233
D
Sbjct: 289 GGSD 292
Score = 64 (27.6 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 159 MTGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDIS-EMLCVRTFTKLEWPVR 216
M G + + G+ G +A G YFA G +D V +W + +++ R K+ P
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDVVDYREVIKVHRPPA 318
Query: 217 TISFS 221
++ S
Sbjct: 319 PLATS 323
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 150 (57.9 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 51/181 (28%), Positives = 80/181 (44%)
Query: 6 IPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH 65
+P S + H V SV + G + S D+T +VW H + L H
Sbjct: 89 VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWST----HRQKFLFSLSQH 144
Query: 66 ADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIA 124
+ V + P LI +AS DKTV+LWD S +C E G + + P GT IA
Sbjct: 145 INWVRCAKFSPD-GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 125 VGNRDDELTILDVRKFKPI-HRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPM-G 182
D+ + + DVR + + H + VN ++++ +G +L T ++ +D M G
Sbjct: 204 AAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGN--YLVTASSDSTLKILDLMEG 261
Query: 183 R 183
R
Sbjct: 262 R 262
Score = 146 (56.5 bits), Expect = 7.2e-16, Sum P(2) = 7.2e-16
Identities = 42/146 (28%), Positives = 72/146 (49%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R + GH+ V SV ++ +LASGS+D VWH++P + + GH D+V +
Sbjct: 13 RHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKP----QTRAYRFAGHKDAVTCVN 68
Query: 74 WDPKHADLIATASGDKTVRLWDAR-SGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
+ P L+A+ S DKTVR+W G+ + + ++ + DG + D+
Sbjct: 69 FSPS-GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTAS--DDK 125
Query: 133 TILDVRKFKPIHRRKFGYEVNE-IAW 157
T+ K HR+KF + +++ I W
Sbjct: 126 TV----KVWSTHRQKFLFSLSQHINW 147
Score = 118 (46.6 bits), Expect = 7.2e-16, Sum P(2) = 7.2e-16
Identities = 34/122 (27%), Positives = 55/122 (45%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
C P GR S D V LWD + CV ++ + V + F +G IA+A D
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 235 FIDISNVHTGRTVHQIPCR-AAMNSVEWNPKYNLLAYAGDDKNKYQAD--EG--VFRIYG 289
+ + +V T R + AA+N++ ++P N L A D D EG ++ ++G
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHG 269
Query: 290 FE 291
+
Sbjct: 270 HQ 271
Score = 100 (40.3 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 170 NAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIAS 229
+A ++ P G Y S+DS + + D+ E + T + P T++FS TG+Y AS
Sbjct: 229 SAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 288
Query: 230 ASED 233
D
Sbjct: 289 GGSD 292
Score = 62 (26.9 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 159 MTGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLW 197
M G + + G+ G +A G YFA G +D V +W
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 163 (62.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 48/161 (29%), Positives = 80/161 (49%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH ++ S ++N + + +GS+D+T ++W +GK L GH D + C+D
Sbjct: 259 GHCAEISSASFNWDCSLILTGSMDKTCKLWDAT---NGKCV-ATLTGHDDEILDSCFDYT 314
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILD 136
LIATAS D T R++ A + KC + E GE I++ P G H+ G+ D I D
Sbjct: 315 -GKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWD 373
Query: 137 VRKFKPIHRRKFGY--EVNEIAWNMTGEMFFLTTGNAGCYC 175
+ + + + G+ E+ A+N G + + TG+ C
Sbjct: 374 AQTGQCLQVLE-GHTDEIFSCAFNYKGNI--VITGSKDNTC 411
Score = 162 (62.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 50/193 (25%), Positives = 92/193 (47%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
H + +VA N +G+ +GS D+T ++W G+ + L GH + V + ++ +
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDT---ASGEELNT-LEGHRNVVYAIAFNNPY 146
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDV 137
D IAT S DKT +LW +GKC + E + +++ P T +A G+ D + D+
Sbjct: 147 GDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI 206
Query: 138 RKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDP-MGRY--FAVGSADSL 193
+ + ++ R E+ +++N +G+ + TG+ + D GR +G +
Sbjct: 207 QNGEEVYTLRGHSAEIISLSFNTSGDR--IITGSFDHTVVVWDADTGRKVNILIGHCAEI 264
Query: 194 VSL---WDISEML 203
S WD S +L
Sbjct: 265 SSASFNWDCSLIL 277
Score = 159 (61.0 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 39/121 (32%), Positives = 67/121 (55%)
Query: 18 GHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
GH+ V+++A+N G K+A+GS D+T ++W +E GK RGH + L ++P
Sbjct: 132 GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVET---GKCYHT-FRGHTAEIVCLSFNP 187
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTIL 135
+ + L+AT S D T +LWD ++G+ S E I++++ G I G+ D + +
Sbjct: 188 Q-STLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVW 246
Query: 136 D 136
D
Sbjct: 247 D 247
Score = 158 (60.7 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 53/165 (32%), Positives = 83/165 (50%)
Query: 16 YT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
YT GH ++ S+++N +G ++ +GS D T VW + G+ +I L GH +
Sbjct: 213 YTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADT---GRKVNI-LIGHCAEISSAS 268
Query: 74 --WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG---ENINITYKPDGTHIAVGNR 128
WD LI T S DKT +LWDA +GKC A L+G E ++ + G IA +
Sbjct: 269 FNWD---CSLILTGSMDKTCKLWDATNGKCV--ATLTGHDDEILDSCFDYTGKLIATASA 323
Query: 129 DDELTILDVRKFKPIHRRKFGYE--VNEIAWNMTGEMFFLTTGNA 171
D I K I + + G+E +++I++N G L TG++
Sbjct: 324 DGTARIFSAATRKCIAKLE-GHEGEISKISFNPQGN--HLLTGSS 365
Score = 144 (55.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 36/120 (30%), Positives = 63/120 (52%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI-ELRGHADSVDQLCWD 75
TGH ++ ++ TG +A+ S D TAR++ K I +L GH + ++ ++
Sbjct: 300 TGHDDEILDSCFDYTGKLIATASADGTARIFSAATR-----KCIAKLEGHEGEISKISFN 354
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTI 134
P+ L+ T S DKT R+WDA++G+C Q E + I + + G + G++D+ I
Sbjct: 355 PQGNHLL-TGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRI 413
Score = 128 (50.1 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 45/163 (27%), Positives = 82/163 (50%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75
+ GH ++ +++N T +A+GS+D TA++W I+ +G+ + LRGH+ + L ++
Sbjct: 173 FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ---NGE-EVYTLRGHSAEIISLSFN 228
Query: 76 PKHADLIATASGDKTVRLWDARSGK-----CSQQAELSGENINITYKPDGTHIAVGNRDD 130
D I T S D TV +WDA +G+ AE+S + N D + I G+ D
Sbjct: 229 TS-GDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNW----DCSLILTGSMDK 283
Query: 131 ELTILDVRKFKPIHRRKFGY--EVNEIAWNMTGEMFFLTTGNA 171
+ D K + G+ E+ + ++ TG++ + T +A
Sbjct: 284 TCKLWDATNGKCVATLT-GHDDEILDSCFDYTGKL--IATASA 323
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH+ ++ +++N G L +GS D+TAR+W + G+ + L GH D + ++ K
Sbjct: 343 GHEGEISKISFNPQGNHLLTGSSDKTARIWDAQT---GQCLQV-LEGHTDEIFSCAFNYK 398
Query: 78 HADLIATASGDKTVRLW 94
+++ T S D T R+W
Sbjct: 399 -GNIVITGSKDNTCRIW 414
Score = 115 (45.5 bits), Expect = 0.00051, P = 0.00051
Identities = 35/123 (28%), Positives = 60/123 (48%)
Query: 157 WNM-TGEMFFLTTGN-AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ TG+ + G+ A C++ +P A GS D+ LWDI V T
Sbjct: 162 WSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAE 221
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQI--PCRAAMNSVEWNPKYNLLAYAG 272
+ ++SF+ +GD I + S D + + + TGR V+ + C A ++S +N +L+
Sbjct: 222 IISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHC-AEISSASFNWDCSLILTGS 280
Query: 273 DDK 275
DK
Sbjct: 281 MDK 283
Score = 97 (39.2 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 26/89 (29%), Positives = 41/89 (46%)
Query: 188 GSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTV 247
GS D LWD + CV T T + + F +TG IA+AS D I + T + +
Sbjct: 279 GSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCI 338
Query: 248 HQIPCRAA-MNSVEWNPKYNLLAYAGDDK 275
++ ++ + +NP+ N L DK
Sbjct: 339 AKLEGHEGEISKISFNPQGNHLLTGSSDK 367
Score = 75 (31.5 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 13/58 (22%), Positives = 29/58 (50%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
I+ +P G + GS+D +WD C++ + + +F++ G+ + + S+D
Sbjct: 351 ISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKD 408
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 147 (56.8 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 51/181 (28%), Positives = 80/181 (44%)
Query: 6 IPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH 65
+P S + H V SV + G L + S D+T +VW H + L H
Sbjct: 89 VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWST----HRQRFLFSLTQH 144
Query: 66 ADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIA 124
+ V + P LI +AS DKTV+LWD S +C E G + + P GT IA
Sbjct: 145 INWVRCAKFSPD-GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 125 VGNRDDELTILDVRKFKPI-HRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPM-G 182
D+ + + D R + + H + VN ++++ +G +L T ++ +D M G
Sbjct: 204 AAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGN--YLITASSDSTLKILDLMEG 261
Query: 183 R 183
R
Sbjct: 262 R 262
Score = 140 (54.3 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 42/146 (28%), Positives = 70/146 (47%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R + GH+ V V ++ LASGS+D T +WH++P GH D+V +
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRA----YRFTGHKDAVTCVN 68
Query: 74 WDPKHADLIATASGDKTVRLWDAR-SGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
+ P L+A+ S DKTVR+W G+ + + ++ + DG + V DD+
Sbjct: 69 FSPS-GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG-QLLVTASDDK- 125
Query: 133 TILDVRKFKPIHRRKFGYEVNE-IAW 157
T+ K HR++F + + + I W
Sbjct: 126 TV----KVWSTHRQRFLFSLTQHINW 147
Score = 118 (46.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 37/134 (27%), Positives = 58/134 (43%)
Query: 163 MFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSH 222
+F LT C P GR S D V LWD + CV ++ + V + F
Sbjct: 138 LFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHP 197
Query: 223 TGDYIASASEDLFIDISNVHTGRTVHQIPCR-AAMNSVEWNPKYNLLAYAGDDKNKYQAD 281
+G IA+A D + + + T R V AA+N++ ++P N L A D D
Sbjct: 198 SGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILD 257
Query: 282 --EG--VFRIYGFE 291
EG ++ ++G +
Sbjct: 258 LMEGRLLYTLHGHQ 271
Score = 99 (39.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 170 NAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIAS 229
+A ++ P G Y S+DS + + D+ E + T + P T++FS TG+Y AS
Sbjct: 229 SAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 288
Query: 230 ASED 233
D
Sbjct: 289 GGSD 292
Score = 62 (26.9 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 159 MTGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLW 197
M G + + G+ G +A G YFA G +D V +W
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>WB|WBGene00009341 [details] [associations]
symbol:thoc-3 species:6239 "Caenorhabditis elegans"
[GO:0000347 "THO complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 KO:K12880 EMBL:Z81523 GeneTree:ENSGT00700000104559
OMA:LAYACDD RefSeq:NP_492416.2 UniGene:Cel.18802
ProteinModelPortal:P91867 SMR:P91867 STRING:P91867 PaxDb:P91867
EnsemblMetazoa:F32H2.4 GeneID:172713 KEGG:cel:CELE_F32H2.4
UCSC:F32H2.4 CTD:172713 WormBase:F32H2.4 HOGENOM:HOG000115395
InParanoid:P91867 NextBio:876703 Uniprot:P91867
Length = 331
Score = 207 (77.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 70/259 (27%), Positives = 106/259 (40%)
Query: 17 TGHKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75
+ H V VA + L AS S D+ VW I + K + + W
Sbjct: 77 SSHSSSVEQVACSEKQPNLFASASADRNICVWDIR-----QSKPTHRISNRVGNFFISWS 131
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTIL 135
P I D + D R+ + E+ + +T+ P H+ V ++ IL
Sbjct: 132 PCDEYFIFLDK-DNRINTVDIRNYQVVNSYEMKTFSHELTFHPLSNHVFVAESGGKVEIL 190
Query: 136 DVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVS 195
KF E ++ + C ++I GR AVG++D+ S
Sbjct: 191 -----------KFAGGALEPVTSIQAH-----SHQVECLAVSISKDGRKLAVGASDASCS 234
Query: 196 LWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAA 255
LWD+ E++C R + ++ +R +SFS G +AS SED IDI+ V G H+I
Sbjct: 235 LWDLEELICERVIPRHDYGIRAVSFSCNGQLLASGSEDHSIDIAYVPDGSRCHEIKHTGE 294
Query: 256 MNSVEWNPKYNLLAYAGDD 274
SV W+P LLAY D
Sbjct: 295 TYSVAWHPNSLLLAYTASD 313
Score = 156 (60.0 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 36/151 (23%), Positives = 81/151 (53%)
Query: 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-RGHADSVDQLCWDPKHA 79
++ S+A+NC GTKL G+ D+ V +++ G G+++ + H+ SV+Q+ K
Sbjct: 37 QQCQSIAFNCDGTKLVCGAFDKKVSVANVD--G-GRLRFSWVGSSHSSSVEQVACSEKQP 93
Query: 80 DLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRK 139
+L A+AS D+ + +WD R K + + N I++ P + ++D+ + +D+R
Sbjct: 94 NLFASASADRNICVWDIRQSKPTHRISNRVGNFFISWSPCDEYFIFLDKDNRINTVDIRN 153
Query: 140 FKPIHRRKFGYEVNEIAWN-MTGEMFFLTTG 169
++ ++ + +E+ ++ ++ +F +G
Sbjct: 154 YQVVNSYEMKTFSHELTFHPLSNHVFVAESG 184
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 137 (53.3 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 40/160 (25%), Positives = 74/160 (46%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH + SV ++ G LAS + D +W G K L GH+ + + W
Sbjct: 37 GHSAAISSVKFSPNGEWLASSAADALIIIWGAYD---GNCKKT-LYGHSLEISDVAWSSD 92
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT-YKPDGTHIAVGNRDDELTILD 136
+ L++ AS DKT+++WD RSGKC + + + + + P I G+ D+ + I +
Sbjct: 93 SSRLVS-ASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWE 151
Query: 137 VRKFKPIHRRKFGYE-VNEIAWNMTGEMFFLTTGNAGCYC 175
V+ K + + ++ + +N G + + +G+ C
Sbjct: 152 VKTGKCLKTLSAHSDPISAVNFNCNGSL--IVSGSYDGLC 189
Score = 124 (48.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 32/121 (26%), Positives = 59/121 (48%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V +N + SGS D++ ++W ++ GK L H+D + + ++
Sbjct: 121 GHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKT---GKCLKT-LSAHSDPISAVNFNC- 175
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQ-AELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
+ LI + S D R+WDA SG+C + A+ ++ + + P+G +I D+ L +
Sbjct: 176 NGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLW 235
Query: 136 D 136
D
Sbjct: 236 D 236
Score = 121 (47.7 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 34/113 (30%), Positives = 54/113 (47%)
Query: 169 GNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT--KLEWPVRTISFSHTG-D 225
GN + P G+Y + D+ + LWD S C++T+T K E SFS TG
Sbjct: 207 GNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRK 266
Query: 226 YIASASEDLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKNK 277
++ S SED + I N+ T V ++ + S +P N++A A + +K
Sbjct: 267 WVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDK 319
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 209 (78.6 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 67/249 (26%), Positives = 113/249 (45%)
Query: 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQ 71
+ R GH V VA++ G LAS S D + ++W + + +K + GH +V
Sbjct: 142 YERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ-QSYECIKT--MHGHDHNVSS 198
Query: 72 LCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDD 130
+ + P D + +AS D+T+++W+ +G C + E + + +G+ A + D
Sbjct: 199 VAFVPA-GDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQ 257
Query: 131 ELTI-LDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGS 189
+ + L K + R + V IAW + AG G + A GS
Sbjct: 258 TIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEA-AGADNKKGHHQGPFLASGS 316
Query: 190 ADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASEDLFI---DISNVHTGR 245
D + +WD+S LC+ T + + W VR ++F G Y+ SAS+D I D+ N +
Sbjct: 317 RDKTIRIWDVSVGLCLLTLSGHDNW-VRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMK 375
Query: 246 TV--HQIPC 252
T+ HQ C
Sbjct: 376 TLYAHQHFC 384
Score = 146 (56.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 56/228 (24%), Positives = 95/228 (41%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V SVA+ G + S S D+T ++W + G+ VK GH + V ++
Sbjct: 191 GHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVAT-GYC-VKTYT--GHREWV-RMVRVHI 245
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILD 136
+ AT S D+T+R+W S C + + I + P+ A+ +E D
Sbjct: 246 EGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAI----NEAAGAD 301
Query: 137 VRKFKPIHRRKF---GYEVNEIA-WNMTGEMFFLTTGNAGCYC--IAIDPMGRYFAVGSA 190
+K H+ F G I W+++ + LT + +A P G+Y S
Sbjct: 302 NKKGH--HQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASD 359
Query: 191 DSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
D + +WD+ C++T + +I F Y+ S S D + +
Sbjct: 360 DKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKV 407
Score = 143 (55.4 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 63/272 (23%), Positives = 115/272 (42%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
TGH+ + V ++ + S S D T R+W E + + L+GH DSV + +D
Sbjct: 105 TGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYER----SLKGHTDSVQDVAFDA 160
Query: 77 KHADLIATASGDKTVRLWD-ARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTI 134
+ L+A+ S D +++LWD +S +C + N++ + + P G ++ +RD + +
Sbjct: 161 Q-GKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKM 219
Query: 135 LDVRKFKPIHRRKFGYE--VNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADS 192
+V + + G+ V + ++ G +F A C + D R + S D
Sbjct: 220 WEVATGYCV-KTYTGHREWVRMVRVHIEGSIF------ATC---SNDQTIRVWLTNSKDC 269
Query: 193 LVSLWDISEML-CVRTFTKLEWPVRTISFS-------HTGDYIASASEDLFIDISNVHTG 244
V L D + C+ + + H G ++AS S D I I +V G
Sbjct: 270 KVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVG 329
Query: 245 RTVHQIPCRAA-MNSVEWNPKYNLLAYAGDDK 275
+ + + + ++P L A DDK
Sbjct: 330 LCLLTLSGHDNWVRGLAFHPGGKYLVSASDDK 361
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 150 (57.9 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 38/123 (30%), Positives = 62/123 (50%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R + GHK + S+ + G +LA+ S D +W+ +PH GH D V +
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARA----YRYVGHKDVVTSVQ 67
Query: 74 WDPKHADLIATASGDKTVRLW--DARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDE 131
+ P H +L+A+AS D+TVRLW D R GK S+ + ++ + DG +A + D
Sbjct: 68 FSP-HGNLLASASRDRTVRLWIPDKR-GKFSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 132 LTI 134
+ +
Sbjct: 126 IKV 128
Score = 130 (50.8 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 46/169 (27%), Positives = 77/169 (45%)
Query: 6 IPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH 65
IP K E+ H V SV ++ G LA+ S D++ +VW + + + L H
Sbjct: 88 IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM----YRQRFLYSLYRH 143
Query: 66 ADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIA 124
V + P LI + S DKT+++WD + +C S N + + P GT IA
Sbjct: 144 THWVRCAKFSPD-GRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIA 202
Query: 125 VGNRDDELTILDVRKFKPI-HRRKFGYEVNEIAWNMTGEMFFLTTGNAG 172
D + + DVR K + H + VN I+++ + + + +T + G
Sbjct: 203 SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS-DNYLVTASSDG 250
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 39/150 (26%), Positives = 74/150 (49%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI-ELRGHADSVDQLCWDPK 77
H V ++ G + S S D+T ++W + V + + G A+ VD ++P
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTTNKQCVNNFSDSVGFANFVD---FNPS 197
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILD 136
IA+A D+TV++WD R K Q ++ +N I++ P ++ + D L ILD
Sbjct: 198 -GTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILD 256
Query: 137 VRKFKPIHRRKFGYE--VNEIAWNMTGEMF 164
+ + + I+ + G+ V ++++ GE+F
Sbjct: 257 LLEGRLIYTLQ-GHTGPVFTVSFSKGGELF 285
Score = 118 (46.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 38/128 (29%), Positives = 56/128 (43%)
Query: 12 HSR--EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H+R Y GHK V SV ++ G LAS S D+T R+W P GK E + H V
Sbjct: 50 HARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWI--PDKRGKFS--EFKAHTAPV 105
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT-YKPDGTHIAVGNR 128
+ + +ATAS DK++++W + + + PDG I +
Sbjct: 106 RSVDFSAD-GQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 129 DDELTILD 136
D + I D
Sbjct: 165 DKTIKIWD 172
Score = 111 (44.1 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 29/121 (23%), Positives = 48/121 (39%)
Query: 157 WNMTGEMFF--LTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+M + F L C P GR S D + +WD + CV F+
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGD 273
+ F+ +G IASA D + + +V + + + +N + ++P N L A
Sbjct: 189 ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASS 248
Query: 274 D 274
D
Sbjct: 249 D 249
Score = 95 (38.5 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 27/96 (28%), Positives = 41/96 (42%)
Query: 182 GRYFAVGSADSLVSLWDI-SEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISN 240
G++ A S D + +W + + + W VR FS G I S SED I I +
Sbjct: 114 GQFLATASEDKSIKVWSMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 241 VHTGRTVHQIPCRAAM-NSVEWNPKYNLLAYAGDDK 275
+ V+ N V++NP +A AG D+
Sbjct: 173 TTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQ 208
Score = 89 (36.4 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 170 NAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIAS 229
+ G CI+ P Y S+D + + D+ E + T PV T+SFS G+ AS
Sbjct: 228 SGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFAS 287
Query: 230 ASED 233
D
Sbjct: 288 GGAD 291
Score = 81 (33.6 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 23/100 (23%), Positives = 45/100 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+ +P G A +D V +WD+ ++ + V ISF + +Y+ +AS D
Sbjct: 192 VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGT 251
Query: 236 IDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGDD 274
+ I ++ GR ++ + + +V ++ L A G D
Sbjct: 252 LKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGAD 291
Score = 62 (26.9 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 159 MTGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLW--DISEMLC 204
+ G + + G+ G + ++ G FA G AD+ V LW + E+ C
Sbjct: 258 LEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHC 306
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 149 (57.5 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 47/169 (27%), Positives = 81/169 (47%)
Query: 6 IPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH 65
IP K S E+ H V SV ++ G LAS S D++ +VW++ + + L H
Sbjct: 88 IPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNM----YRQRFLYSLYRH 143
Query: 66 ADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIA 124
V + P LI + S DKT+++WD + +C ++ G + + P+GT IA
Sbjct: 144 THWVRCAKFSPD-GRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIA 202
Query: 125 VGNRDDELTILDVRKFKPI-HRRKFGYEVNEIAWNMTGEMFFLTTGNAG 172
D + I D+R K + H + VN ++++ +G + +T + G
Sbjct: 203 SAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGN-YLITASSDG 250
Score = 145 (56.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 41/151 (27%), Positives = 76/151 (50%)
Query: 4 SSIPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR 63
+S P + R + GHK + SV ++ G +LA+GS D +W + P + +
Sbjct: 2 ASSPEDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRP----QARAFRYV 57
Query: 64 GHADSVDQLCWDPKHADLIATASGDKTVRLW--DARSGKCSQQAELSGENINITYKPDGT 121
GH D + + + P +L+A+AS D+T+RLW D R GK S+ + ++ + DG
Sbjct: 58 GHKDVITSVQFSPL-GNLLASASRDRTIRLWIPDKR-GKSSEFKAHTAPVRSVDFSADGQ 115
Query: 122 HIAVGNRDDELTILDVRKFKPIHRRKFGYEV 152
+A + D + + ++ +R++F Y +
Sbjct: 116 FLASASEDKSIKVWNM------YRQRFLYSL 140
Score = 125 (49.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 41/157 (26%), Positives = 78/157 (49%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI-ELRGHADSVDQLCWDPK 77
H V ++ G + S S D+T ++W + V + + G A+ V ++P
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTTNKQCVNNFSDFVGFANFV---AFNP- 196
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILD 136
+ IA+A D TV++WD R K Q ++ +N +++ P G ++ + D L ILD
Sbjct: 197 NGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILD 256
Query: 137 VRKFKPIHRRKFGYE--VNEIAWNMTGEMFFLTTGNA 171
+ + + I+ + G+ V ++++ GE+F T+G A
Sbjct: 257 LLEGRLIYTLQ-GHTGPVFTVSFSKGGELF--TSGGA 290
Score = 117 (46.2 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 31/121 (25%), Positives = 48/121 (39%)
Query: 157 WNMTGEMFF--LTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
WNM + F L C P GR S D + +WD + CV F+
Sbjct: 129 WNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGF 188
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGD 273
++F+ G IASA D + I ++ + + + +N V ++P N L A
Sbjct: 189 ANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASS 248
Query: 274 D 274
D
Sbjct: 249 D 249
Score = 116 (45.9 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 38/148 (25%), Positives = 64/148 (43%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75
Y GHK + SV ++ G LAS S D+T R+W + G K E + H V + +
Sbjct: 56 YVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRG----KSSEFKAHTAPVRSVDFS 111
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT-YKPDGTHIAVGNRDDELTI 134
+A+AS DK++++W+ + + + PDG I + D + I
Sbjct: 112 AD-GQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 135 LDVRKFKPIHR-RKFGYEVNEIAWNMTG 161
D + ++ F N +A+N G
Sbjct: 171 WDTTNKQCVNNFSDFVGFANFVAFNPNG 198
Score = 90 (36.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 170 NAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIAS 229
+ G C++ P G Y S+D + + D+ E + T PV T+SFS G+ S
Sbjct: 228 SGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTS 287
Query: 230 ASED 233
D
Sbjct: 288 GGAD 291
Score = 90 (36.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+A +P G A +D V +WDI ++ + V +SF +G+Y+ +AS D
Sbjct: 192 VAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGT 251
Query: 236 IDISNVHTGRTVHQI 250
+ I ++ GR ++ +
Sbjct: 252 LKILDLLEGRLIYTL 266
Score = 55 (24.4 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 159 MTGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLW 197
+ G + + G+ G + ++ G F G AD+ V LW
Sbjct: 258 LEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 150 (57.9 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 38/123 (30%), Positives = 62/123 (50%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R + GHK + S+ + G +LA+ S D +W+ +PH GH D V +
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARA----YRYVGHKDVVTSVQ 67
Query: 74 WDPKHADLIATASGDKTVRLW--DARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDE 131
+ P H +L+A+AS D+TVRLW D R GK S+ + ++ + DG +A + D
Sbjct: 68 FSP-HGNLLASASRDRTVRLWIPDKR-GKFSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 132 LTI 134
+ +
Sbjct: 126 IKV 128
Score = 137 (53.3 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 47/169 (27%), Positives = 77/169 (45%)
Query: 6 IPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH 65
IP K E+ H V SV ++ G LA+ S D++ +VW + + + L H
Sbjct: 88 IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM----YRQRFLYSLYRH 143
Query: 66 ADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIA 124
V + P LI + S DKT+++WD + +C S N + + P GT IA
Sbjct: 144 THWVRCAKFSPD-GRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIA 202
Query: 125 VGNRDDELTILDVRKFKPI-HRRKFGYEVNEIAWNMTGEMFFLTTGNAG 172
D + + DVR K + H + VN I+++ +G + +T + G
Sbjct: 203 SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGN-YLITASSDG 250
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 40/150 (26%), Positives = 75/150 (50%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI-ELRGHADSVDQLCWDPK 77
H V ++ G + S S D+T ++W + V + + G A+ VD ++P
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTTNKQCVNNFSDSVGFANFVD---FNPS 197
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILD 136
IA+A D+TV++WD R K Q ++ +N I++ P G ++ + D L ILD
Sbjct: 198 -GTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 256
Query: 137 VRKFKPIHRRKFGYE--VNEIAWNMTGEMF 164
+ + + I+ + G+ V ++++ GE+F
Sbjct: 257 LLEGRLIYTLQ-GHTGPVFTVSFSKGGELF 285
Score = 118 (46.6 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 38/128 (29%), Positives = 56/128 (43%)
Query: 12 HSR--EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H+R Y GHK V SV ++ G LAS S D+T R+W P GK E + H V
Sbjct: 50 HARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWI--PDKRGKFS--EFKAHTAPV 105
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT-YKPDGTHIAVGNR 128
+ + +ATAS DK++++W + + + PDG I +
Sbjct: 106 RSVDFSAD-GQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 129 DDELTILD 136
D + I D
Sbjct: 165 DKTIKIWD 172
Score = 110 (43.8 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 29/121 (23%), Positives = 48/121 (39%)
Query: 157 WNMTGEMFF--LTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+M + F L C P GR S D + +WD + CV F+
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGD 273
+ F+ +G IASA D + + +V + + + +N + ++P N L A
Sbjct: 189 ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASS 248
Query: 274 D 274
D
Sbjct: 249 D 249
Score = 95 (38.5 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 170 NAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIAS 229
+ G CI+ P G Y S+D + + D+ E + T PV T+SFS G+ AS
Sbjct: 228 SGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFAS 287
Query: 230 ASED 233
D
Sbjct: 288 GGAD 291
Score = 95 (38.5 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 27/96 (28%), Positives = 41/96 (42%)
Query: 182 GRYFAVGSADSLVSLWDI-SEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISN 240
G++ A S D + +W + + + W VR FS G I S SED I I +
Sbjct: 114 GQFLATASEDKSIKVWSMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 241 VHTGRTVHQIPCRAAM-NSVEWNPKYNLLAYAGDDK 275
+ V+ N V++NP +A AG D+
Sbjct: 173 TTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQ 208
Score = 87 (35.7 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 24/100 (24%), Positives = 46/100 (46%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+ +P G A +D V +WD+ ++ + V ISF +G+Y+ +AS D
Sbjct: 192 VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGT 251
Query: 236 IDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGDD 274
+ I ++ GR ++ + + +V ++ L A G D
Sbjct: 252 LKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGAD 291
Score = 63 (27.2 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 159 MTGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLW--DISEMLCVRTFTK 210
+ G + + G+ G + ++ G FA G AD+ V LW + E+ C + TK
Sbjct: 258 LEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHC-KGLTK 311
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 147 (56.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 51/181 (28%), Positives = 80/181 (44%)
Query: 6 IPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH 65
+P S + H V SV + G + S D+T +VW H + L H
Sbjct: 89 VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWAT----HRQKFLFSLSQH 144
Query: 66 ADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIA 124
+ V + P LI +AS DKTV+LWD S +C E G + + P GT IA
Sbjct: 145 INWVRCAKFSPD-GRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 125 VGNRDDELTILDVRKFKPI-HRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPM-G 182
D+ + + DVR + + H + VN ++++ +G +L T ++ +D M G
Sbjct: 204 AAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGN--YLITASSDSTLKILDLMEG 261
Query: 183 R 183
R
Sbjct: 262 R 262
Score = 140 (54.3 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R + GH+ V V ++ +LASGS+D VWH++P GH D+V +
Sbjct: 13 RHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRA----YRFTGHKDAVTCVN 68
Query: 74 WDPKHADLIATASGDKTVRLWDAR-SGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
+ P L+A+ S DKTVR+W G+ + + ++ + DG + D+
Sbjct: 69 FSPS-GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTAS--DDK 125
Query: 133 TILDVRKFKPIHRRKFGYEVNE-IAW 157
T+ K HR+KF + +++ I W
Sbjct: 126 TV----KVWATHRQKFLFSLSQHINW 147
Score = 119 (46.9 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 35/122 (28%), Positives = 54/122 (44%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
C P GR S D V LWD S CV ++ + V + F +G IA+A D
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 235 FIDISNVHTGRTVHQIPCR-AAMNSVEWNPKYNLLAYAGDDKNKYQAD--EG--VFRIYG 289
+ + +V T R + AA+N + ++P N L A D D EG ++ ++G
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 269
Query: 290 FE 291
+
Sbjct: 270 HQ 271
Score = 97 (39.2 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
++ P G Y S+DS + + D+ E + T + P T++FS TG+Y AS D
Sbjct: 235 LSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Score = 66 (28.3 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 159 MTGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDIS-EMLCVRTFTKLEWPVR 216
M G + + G+ G +A G YFA G +D V +W + +++ TK+ P
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDHGEVTKVPRPPA 318
Query: 217 TISFS 221
T++ S
Sbjct: 319 TLASS 323
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 165 (63.1 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 48/163 (29%), Positives = 75/163 (46%)
Query: 2 GESSIPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE 61
G+ IP + E H +V + ++ G LAS S DQTA +W I GH +K
Sbjct: 258 GKHQIPSQTAQILE--SHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHT- 314
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN-INITYKPDG 120
L GH V + W P ++ T ++ +R WD SG C E G + I+ + PDG
Sbjct: 315 LVGHHKPVIAILWSPDDRQVL-TCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDG 373
Query: 121 THIAVGNRDDELTILDVR-KFKPIHRRKFGYEVNEIAWNMTGE 162
I G D + + D+ + K + + +V++IA G+
Sbjct: 374 QGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGK 416
Score = 135 (52.6 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 36/112 (32%), Positives = 61/112 (54%)
Query: 16 YTGHKKKVHSVAWNCTG----TKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQ 71
Y GHK+ + +C G +ASGS D +WH GK+ +EL GHA +V+
Sbjct: 482 YKGHKRS-RFIIRSCFGGYKQAFIASGSEDSQVYIWH---RSTGKLI-VELPGHAGAVNC 536
Query: 72 LCWDPKHADLIATASGDKTVRLWDA-RSGKCSQQAEL-SGENIN-ITYKPDG 120
+ W P + ++A+AS D T+R+W R + +Q+ +L G + N + ++ +G
Sbjct: 537 VSWSPTNLHMLASASDDGTIRIWGLDRINQQNQKKKLVQGSSSNGVIHRCNG 588
Score = 94 (38.1 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 32/115 (27%), Positives = 56/115 (48%)
Query: 183 RYFAVGSADSLVSLWDIS-EMLCVRTFT---KLEWPVRTISFSHTGDYIASASEDLFIDI 238
+Y V + + LW+I + V + + + +R+ + +IAS SED + I
Sbjct: 456 KYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYI 515
Query: 239 SNVHTGRTVHQIPCRA-AMNSVEWNP-KYNLLAYAGDDKNKYQADEGVFRIYGFE 291
+ TG+ + ++P A A+N V W+P ++LA A DD G RI+G +
Sbjct: 516 WHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDD--------GTIRIWGLD 562
Score = 41 (19.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYI 227
IA+ G++ DS++SL+D E R + E + + S S+ YI
Sbjct: 409 IAMTDDGKWLVSVCKDSVISLFD-REATVERLIEE-EDMITSFSLSNDNKYI 458
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 139 (54.0 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R + GH+ V V ++ +LASGS+D VWH++P GH D+V +
Sbjct: 44 RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRA----YRFTGHKDAVTCVN 99
Query: 74 WDPKHADLIATASGDKTVRLWDAR-SGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
+ P L+A+ S DKTVR+W G+ + + ++ + DG + D+
Sbjct: 100 FSPS-GHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTAS--DDK 156
Query: 133 TILDVRKFKPIHRRKFGYEVNE-IAW 157
TI K HR+KF + +++ I W
Sbjct: 157 TI----KVWSTHRQKFLFSLSQHINW 178
Score = 123 (48.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 45/140 (32%), Positives = 64/140 (45%)
Query: 13 SREY--TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVD 70
SR Y TGHK V V ++ +G LASGS D+T R+W G V R H +V
Sbjct: 83 SRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTV----FRAHTATVR 138
Query: 71 QL--CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN----ITYKPDGTHIA 124
+ C D + TAS DKT+++W K LS ++IN + PDG I
Sbjct: 139 SVHFCSDGQS---FVTASDDKTIKVWSTHRQKFL--FSLS-QHINWVRCAKFSPDGRLIV 192
Query: 125 VGNRDDELTILDVRKFKPIH 144
+ D + + D + +H
Sbjct: 193 SASDDKTVKLWDKTSRECVH 212
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 38/150 (25%), Positives = 69/150 (46%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI-ELRGHADSVDQLCWDPK 77
H V ++ G + S S D+T ++W + V E G VD + P
Sbjct: 175 HINWVRCAKFSPDGRLIVSASDDKTVKLW--DKTSRECVHSYCEHGGFVTYVD---FHPS 229
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILD 136
+A A D TV++WD R+ + Q +L +N +++ P G ++ + D L ILD
Sbjct: 230 -GTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILD 288
Query: 137 VRKFKPIHRRKFGYE--VNEIAWNMTGEMF 164
+ + + ++ G++ +A++ TGE F
Sbjct: 289 LMEGRLLYTLH-GHQGPATTVAFSRTGEYF 317
Score = 117 (46.2 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 33/122 (27%), Positives = 55/122 (45%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
C P GR S D V LWD + CV ++ + V + F +G +A+A D
Sbjct: 181 CAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDN 240
Query: 235 FIDISNVHTGRTVHQIPCR-AAMNSVEWNPKYNLLAYAGDDKNKYQAD--EG--VFRIYG 289
+ + +V T R + AA+N++ ++P N L A D D EG ++ ++G
Sbjct: 241 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHG 300
Query: 290 FE 291
+
Sbjct: 301 HQ 302
Score = 100 (40.3 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 170 NAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIAS 229
+A ++ P G Y S+DS + + D+ E + T + P T++FS TG+Y AS
Sbjct: 260 SAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 319
Query: 230 ASED 233
D
Sbjct: 320 GGSD 323
Score = 63 (27.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 159 MTGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDIS-EMLCVRTFTKLEWPVR 216
M G + + G+ G +A G YFA G +D V +W + +++ +++ P
Sbjct: 290 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDVIDYGEVLRVQRPPA 349
Query: 217 TISFS 221
T++ S
Sbjct: 350 TLASS 354
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 208 (78.3 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 65/246 (26%), Positives = 106/246 (43%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + ++ WN G + S VD+T +W + H G+ K + H+ + W +
Sbjct: 265 HKGPIFALKWNKKGNFILSAGVDKTTIIW--DAHT-GEAKQ-QFPFHSAPALDVDWQSNN 320
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILDV 137
A+ S D + + + + + +N I + P G +A + D L I +
Sbjct: 321 T--FASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
Query: 138 RKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSL 196
++ +H + E+ I W+ TG NA ++D S DS V L
Sbjct: 379 KQDSCVHDLQAHNKEIYTIKWSPTGPG--TNNPNANLMLASLDS-------ASFDSTVRL 429
Query: 197 WDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAM 256
WD+ +C+ T TK + PV +++FS G Y+AS S D + I N TG VH +
Sbjct: 430 WDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGI 489
Query: 257 NSVEWN 262
V WN
Sbjct: 490 FEVCWN 495
Score = 170 (64.9 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 47/175 (26%), Positives = 83/175 (47%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+ + GH +V+++ W+ TG LAS S D T ++W ++ V D L+ H + +
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSC--VHD--LQAHNKEIYTIK 398
Query: 74 WDPK-------HADLIA----TASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGT 121
W P +A+L+ +AS D TVRLWD G C E + ++ + PDG
Sbjct: 399 WSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGR 458
Query: 122 HIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCI 176
++A G+ D + I + + +H + + E+ WN G+ + + G C+
Sbjct: 459 YLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASD-GSVCV 512
Score = 146 (56.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 50/219 (22%), Positives = 85/219 (38%)
Query: 58 KDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYK 117
K + LRGH V W+P +DL+A+ SGD T R+W+ S +L + +
Sbjct: 161 KAVVLRGHESEVFICAWNPV-SDLLASGSGDSTARIWNLSENSTSGSTQLV---LRHCIR 216
Query: 118 PDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAG-CYCI 176
G + N+D +T LD + Y+ W G + + G + +
Sbjct: 217 EGGQDVP-SNKD--VTSLDWNSEGTLLATG-SYDGFARIWTKDGNLASTLGQHKGPIFAL 272
Query: 177 AIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFI 236
+ G + D +WD + F P + + + AS S D+ I
Sbjct: 273 KWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCI 331
Query: 237 DISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDD 274
+ + R + +N+++W+P NLLA DD
Sbjct: 332 HVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDD 370
Score = 135 (52.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 59/258 (22%), Positives = 98/258 (37%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-----GHAD----- 67
GH+ +V AWN LASGS D TAR+W++ + + LR G D
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNK 226
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN 127
V L W+ + L+AT S D R+W S + G + + G I
Sbjct: 227 DVTSLDWNSE-GTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAG 285
Query: 128 RDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFA 186
D I D + + F ++ W + N FA
Sbjct: 286 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ---------SNNT-------------FA 323
Query: 187 VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
S D + + + + ++TF V I + TG+ +AS S+D+ + I ++
Sbjct: 324 SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSC 383
Query: 247 VHQIPCR-AAMNSVEWNP 263
VH + + +++W+P
Sbjct: 384 VHDLQAHNKEIYTIKWSP 401
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 156 (60.0 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 38/131 (29%), Positives = 68/131 (51%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R + GH+ + S+ ++ +G ++ASGSVD + VW+++P GH D+V +
Sbjct: 12 RNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRA----YRFTGHKDAVTCVQ 67
Query: 74 WDPKHADLIATASGDKTVRLW-DARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
+ P A L+A++S DKTVRLW + G+ +G ++ + DG + + D +
Sbjct: 68 FSPS-AHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSI 126
Query: 133 TILDVRKFKPI 143
+ V + K I
Sbjct: 127 KLWSVHRQKII 137
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/150 (25%), Positives = 74/150 (49%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI-ELRGHADSVDQLCWDPK 77
H V ++ G + S S D+T ++W + + E G++ VD + P
Sbjct: 143 HNNWVRCARFSPDGQLMVSVSDDRTVKLW--DASSRQLIHTFCEPGGYSSYVD---FHPS 197
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILD 136
+ IATAS D TVR+WD R+ Q ++ +N +++ P G H+ + D L ILD
Sbjct: 198 -STCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILD 256
Query: 137 VRKFKPIHRRKFGYEVNE--IAWNMTGEMF 164
+ + + ++ G++ + ++++ +G+ F
Sbjct: 257 LLEGRLLYTLH-GHQGSASCVSFSRSGDQF 285
Score = 98 (39.6 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 32/124 (25%), Positives = 54/124 (43%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
C P G+ S D V LWD S + TF + + F + IA+AS D
Sbjct: 149 CARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDN 208
Query: 235 FIDISNVHTGRTV-HQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQAD--EG--VFRIYG 289
+ + ++ T + H AA+N++ ++P N L A D D EG ++ ++G
Sbjct: 209 TVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHG 268
Query: 290 FENA 293
+ +
Sbjct: 269 HQGS 272
Score = 97 (39.2 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 28/122 (22%), Positives = 56/122 (45%)
Query: 157 WNMTGEMFFLTTGNAGCYCIAID--PMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+ + T G Y +D P A S+D+ V +WDI ++ +
Sbjct: 171 WDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAA 230
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGD 273
V +SF +G+++ +AS D + I ++ GR ++ + + + + V ++ + A AG
Sbjct: 231 VNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGS 290
Query: 274 DK 275
D+
Sbjct: 291 DQ 292
Score = 50 (22.7 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 159 MTGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLW 197
+ G + + G+ G C++ G FA +D V +W
Sbjct: 258 LEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 158 (60.7 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 39/120 (32%), Positives = 65/120 (54%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
H V SV ++ G +L SGS D T ++W +P G++ L GH+ +V+ L + P
Sbjct: 749 HLGPVESVVFSPDGKQLVSGSYDDTVKIW--DP-ATGELLQT-LDGHSGTVESLAFSPD- 803
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTILDV 137
L+A+ S D T+ LWD+ +G+ Q E +I ++ + PDG +A + D + I D+
Sbjct: 804 GKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDL 863
Score = 155 (59.6 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 39/123 (31%), Positives = 67/123 (54%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
G V SVA++ G KLASGS T ++W+ P G++ L GH+ SV + + P
Sbjct: 916 GRSGWVKSVAFSPDGKKLASGSEKNTVKLWN--P-ATGELLQT-LEGHSQSVRSVAFSPD 971
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENI---NITYKPDGTHIAVGNRDDELTI 134
L A++S D T++LW++ +G+ Q G ++ + + PDG H+ G+ D+ + +
Sbjct: 972 GKQL-ASSSSDTTIKLWNSTTGELQQT--FKGHDLWIRAVAFSPDGKHLVSGSDDNTIKL 1028
Query: 135 LDV 137
D+
Sbjct: 1029 WDL 1031
Score = 155 (59.6 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 36/108 (33%), Positives = 62/108 (57%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH ++ SV ++ G LASGS DQTA++W +P G++ I GH+ V+ + + P
Sbjct: 1168 GHSDRIQSVVFSPDGKLLASGSYDQTAKLW--DP-ATGELLQI-FEGHSKWVESVAFSPD 1223
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIA 124
L+A++S +T++LWD +G+ Q E+ ++ + PDG +A
Sbjct: 1224 -GKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLA 1270
Score = 152 (58.6 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 40/124 (32%), Positives = 65/124 (52%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH + V SV ++ G LAS S D T ++W+ P G+++ L G +D VD +
Sbjct: 1080 RTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWN--PLT-GELQQT-LTGRSDWVDSVA 1135
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDEL 132
+ P L A+ D T++LWD+ +G+ Q E + I ++ + PDG +A G+ D
Sbjct: 1136 FSPDGKQL-ASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTA 1194
Query: 133 TILD 136
+ D
Sbjct: 1195 KLWD 1198
Score = 148 (57.2 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 35/120 (29%), Positives = 65/120 (54%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75
+ GH + SVA+ G +LAS S D T ++W + G+++ L H+ SV + +
Sbjct: 830 FEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLAT---GELQQT-LDSHSQSVRSVAFS 885
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTI 134
P L+A++S D T+++W+ +G+ Q E SG ++ + PDG +A G+ + + +
Sbjct: 886 PD-GKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKL 944
Score = 145 (56.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 34/118 (28%), Positives = 61/118 (51%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V S+A++ G LASGS D T +W G++ GH S+ + + P
Sbjct: 790 GHSGTVESLAFSPDGKLLASGSYDNTIDLWD---SATGELLQT-FEGHPHSIWSVAFAPD 845
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTI 134
+L A+AS D T+++WD +G+ Q + +++ ++ + PDG +A + D + +
Sbjct: 846 GKEL-ASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKV 902
Score = 142 (55.0 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 33/120 (27%), Positives = 64/120 (53%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75
+ GH + +VA++ G L SGS D T ++W + +++ L H+ SV + +
Sbjct: 998 FKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLAT---SELQQ-SLEDHSRSVHAVAFS 1053
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTI 134
P L A++S D T++LWD+ +G+ + E + + ++T+ PDG +A + D + +
Sbjct: 1054 PDDKQL-ASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKL 1112
Score = 137 (53.3 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 35/117 (29%), Positives = 62/117 (52%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
H + V SVA++ G LAS S+D T +VW+ P G+++ L G + V + + P
Sbjct: 875 HSQSVRSVAFSPDGKLLASSSLDSTIKVWN--P-ATGELQQ-SLEGRSGWVKSVAFSPDG 930
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTI 134
L A+ S TV+LW+ +G+ Q E +++ ++ + PDG +A + D + +
Sbjct: 931 KKL-ASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKL 986
Score = 136 (52.9 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 32/120 (26%), Positives = 61/120 (50%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH + V SVA++ G +LAS S D T ++W+ G+++ +GH + + + P
Sbjct: 958 GHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTT---GELQQT-FKGHDLWIRAVAFSPD 1013
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILD 136
L++ S D T++LWD + + Q E +++ + + PD +A + D + + D
Sbjct: 1014 GKHLVS-GSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWD 1072
Score = 131 (51.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 36/121 (29%), Positives = 63/121 (52%)
Query: 157 WN-MTGEMFFLTTGNAGCY-CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+ TGE+ G++G +A P G+ A GS D+ + LWD + ++TF
Sbjct: 777 WDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHS 836
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGD 273
+ +++F+ G +ASAS+D I I ++ TG + + ++ SV ++P LLA +
Sbjct: 837 IWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSL 896
Query: 274 D 274
D
Sbjct: 897 D 897
Score = 129 (50.5 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 37/123 (30%), Positives = 61/123 (49%)
Query: 157 WNM-TGEMFFLTTGNA-GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+ TGE+ G+ + +A P G+ A S DS + +WD++ +T
Sbjct: 819 WDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQS 878
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGD 273
VR+++FS G +AS+S D I + N TG + R+ + SV ++P LA +G
Sbjct: 879 VRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLA-SGS 937
Query: 274 DKN 276
+KN
Sbjct: 938 EKN 940
Score = 109 (43.4 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 35/121 (28%), Positives = 54/121 (44%)
Query: 157 WN-MTGEMFFLTTGNAGCY-CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
WN TGE+ G +G +A P G+ A GS + V LW+ + ++T
Sbjct: 903 WNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQS 962
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGD 273
VR+++FS G +AS+S D I + N TG + +V ++P L D
Sbjct: 963 VRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSD 1022
Query: 274 D 274
D
Sbjct: 1023 D 1023
Score = 104 (41.7 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 33/116 (28%), Positives = 54/116 (46%)
Query: 157 WN-MTGEMFFLTTGNAGCY-CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
WN +TGE+ TG + +A P G+ A G DS + LWD + ++T
Sbjct: 1113 WNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDR 1172
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLA 269
++++ FS G +AS S D + + TG + + + SV ++P LLA
Sbjct: 1173 IQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLA 1228
Score = 97 (39.2 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 31/122 (25%), Positives = 60/122 (49%)
Query: 157 WNM-TGEMF-FLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEW 213
W++ TGE+ L + + +A P G+ A S DS + +W+ + ++ + W
Sbjct: 861 WDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGW 920
Query: 214 PVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAG 272
V++++FS G +AS SE + + N TG + + + ++ SV ++P LA +
Sbjct: 921 -VKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSS 979
Query: 273 DD 274
D
Sbjct: 980 SD 981
Score = 95 (38.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 33/123 (26%), Positives = 57/123 (46%)
Query: 157 WNM-TGEMFFLTTGNA-GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEW 213
W+ TGE+ G++ G + P G+ A S D + LW+ +T T + +W
Sbjct: 1071 WDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDW 1130
Query: 214 PVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAG 272
V +++FS G +AS D I + + TG + + + + SV ++P LLA
Sbjct: 1131 -VDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGS 1189
Query: 273 DDK 275
D+
Sbjct: 1190 YDQ 1192
Score = 71 (30.1 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 22/88 (25%), Positives = 40/88 (45%)
Query: 150 YEVNEIAWN-MTGEMFFLTTGNAGCY-CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRT 207
Y+ W+ TGE+ + G++ +A P G+ A S + LWD ++T
Sbjct: 1190 YDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQT 1249
Query: 208 FTKLEWPVRTISFSHTGDYIASASEDLF 235
+ +++FS G+ +AS D+F
Sbjct: 1250 LNDPDESAGSVAFSPDGNRLASV--DIF 1275
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 76/277 (27%), Positives = 122/277 (44%)
Query: 6 IPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH 65
IP K S E+ H V SV ++ G LA+ S D++ +VW++ + + L H
Sbjct: 88 IPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNM----YRQRFLYSLYRH 143
Query: 66 ADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIA 124
V + P LI + S DKT+++WD + +C S N + + P+GT IA
Sbjct: 144 THWVRCAKFSPD-GRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIA 202
Query: 125 VGNRDDELTILDVRKFKPI-HRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPM-G 182
D + I D+R K + H + VN ++++ +G + +T + G I +D + G
Sbjct: 203 SAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGN-YIITASSDGTLKI-LDLLEG 260
Query: 183 R--YFAVGSADSL--VSLWDISEMLCVR-TFTK-LEWPVRT-ISFSHTGDYIASASEDLF 235
R Y G + VS E+ T+ L W RT + + D I + L
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLW--RTNFDYLNCKDMIKRNLKRLH 318
Query: 236 IDISNVHT----GRTVHQIPCRAAMNSVEWNPKYNLL 268
D S+ H RT H P + +VE NPK ++
Sbjct: 319 FD-SSPHLVDIYPRTPH--PHEGKIETVEINPKLEVI 352
Score = 145 (56.1 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 42/151 (27%), Positives = 78/151 (51%)
Query: 6 IPFKN--LHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR 63
+PF+ + R + GHK + SV ++ +G +LA+ S D +W+ +P + +
Sbjct: 2 LPFQEDPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKP----QARAFRYV 57
Query: 64 GHADSVDQLCWDPKHADLIATASGDKTVRLW--DARSGKCSQQAELSGENINITYKPDGT 121
GH D V + + P +L+A+AS D+TVRLW D R GK S+ + ++ + DG
Sbjct: 58 GHKDVVTSVQFSPL-GNLLASASRDRTVRLWIPDKR-GKSSEFKAHTAPVRSVDFSADGQ 115
Query: 122 HIAVGNRDDELTILDVRKFKPIHRRKFGYEV 152
+A + D + + ++ +R++F Y +
Sbjct: 116 FLATASEDKSIKVWNM------YRQRFLYSL 140
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 35/122 (28%), Positives = 54/122 (44%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75
Y GHK V SV ++ G LAS S D+T R+W + G K E + H V + +
Sbjct: 56 YVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRG----KSSEFKAHTAPVRSVDFS 111
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT-YKPDGTHIAVGNRDDELTI 134
+ATAS DK++++W+ + + + PDG I + D + I
Sbjct: 112 AD-GQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 135 LD 136
D
Sbjct: 171 WD 172
Score = 112 (44.5 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 30/121 (24%), Positives = 47/121 (38%)
Query: 157 WNMTGEMFF--LTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
WNM + F L C P GR S D + +WD + CV F+
Sbjct: 129 WNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGD 273
+ F+ G IASA D + I ++ + + + +N V ++P N + A
Sbjct: 189 ANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASS 248
Query: 274 D 274
D
Sbjct: 249 D 249
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 148 (57.2 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 51/181 (28%), Positives = 80/181 (44%)
Query: 6 IPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH 65
+P S + H V SV + G L + S D+T +VW H + L H
Sbjct: 89 VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST----HRQRFLFSLTQH 144
Query: 66 ADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIA 124
+ V + P LI +AS DKTV+LWD S +C E G + + P GT IA
Sbjct: 145 INWVRCAKFSPD-GRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 125 VGNRDDELTILDVRKFKPI-HRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPM-G 182
D+ + + D R + + H + VN ++++ +G +L T ++ +D M G
Sbjct: 204 AAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGN--YLITASSDSTLKILDLMEG 261
Query: 183 R 183
R
Sbjct: 262 R 262
Score = 141 (54.7 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 40/146 (27%), Positives = 69/146 (47%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R + GH+ V V ++ LASGS+D T +WH++P GH D+V +
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRA----YRFTGHKDAVTCVN 68
Query: 74 WDPKHADLIATASGDKTVRLWDAR-SGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
+ P L+A+ S DKTVR+W G+ + + ++ + DG + + D+
Sbjct: 69 FSPS-GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTAS--DDK 125
Query: 133 TILDVRKFKPIHRRKFGYEVNE-IAW 157
T+ K HR++F + + + I W
Sbjct: 126 TV----KVWSTHRQRFLFSLTQHINW 147
Score = 114 (45.2 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 35/134 (26%), Positives = 58/134 (43%)
Query: 163 MFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSH 222
+F LT C P GR S D V LWD + C+ ++ + V + F
Sbjct: 138 LFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHP 197
Query: 223 TGDYIASASEDLFIDISNVHTGRTVHQIPCR-AAMNSVEWNPKYNLLAYAGDDKNKYQAD 281
+G IA+A D + + + T R + AA+N++ ++P N L A D D
Sbjct: 198 SGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILD 257
Query: 282 --EG--VFRIYGFE 291
EG ++ ++G +
Sbjct: 258 LMEGRLLYTLHGHQ 271
Score = 99 (39.9 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 170 NAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIAS 229
+A ++ P G Y S+DS + + D+ E + T + P T++FS TG+Y AS
Sbjct: 229 SAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 288
Query: 230 ASED 233
D
Sbjct: 289 GGSD 292
Score = 62 (26.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 159 MTGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLW 197
M G + + G+ G +A G YFA G +D V +W
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 154 (59.3 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 46/150 (30%), Positives = 72/150 (48%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V V+W+ GT+LA+ S+D+T R+W E GK EL+GHA V + W+P
Sbjct: 193 GHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPET---GKQVGSELKGHAKWVQGIAWEPL 249
Query: 78 H-----ADLIATASGDKTVRLWDARSGKCSQQAELSGENINITY----KPDGTHIA-VGN 127
H + +AS D T R+W +G+ LSG +++ +GT + +
Sbjct: 250 HLWRDGTPRLVSASKDFTARIWTVNTGRTEHV--LSGHKGSVSCVRWGAGNGTGVVYTAS 307
Query: 128 RDDELTILDVRKFKPIHRRK-FGYEVNEIA 156
D + + D K +H K + VN +A
Sbjct: 308 HDKTVKVWDAVKGTLLHDLKSHAHWVNHLA 337
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 38/115 (33%), Positives = 61/115 (53%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH+K+V+ V ++ G+ +AS D ++W+ GK + LRGH V Q C
Sbjct: 411 GHQKQVNHVTFSPDGSMIASAGWDNATKLWNARD---GKFINT-LRGHVAPVYQ-CSFSA 465
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSG---ENINITYKPDGTHIAVGNRD 129
+ L+ TAS D T+++W+ R+GK + +L G E + + PDG + G RD
Sbjct: 466 DSRLLVTASKDTTLKVWNVRTGKLA--TDLPGHEDEVYGVDWSPDGQRVGSGGRD 518
Score = 136 (52.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 37/93 (39%), Positives = 50/93 (53%)
Query: 18 GHKKKVHSVAWN-CTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
GH + + ++ + +LA+GS D TAR+W E G K L+GHA V + W P
Sbjct: 150 GHGEPILCAQFSPASSARLATGSGDNTARIWDAET---GTPKHT-LKGHAGWVLGVSWSP 205
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSG 109
L AT S DKTVR+WD +GK +EL G
Sbjct: 206 DGTRL-ATCSMDKTVRIWDPETGK-QVGSELKG 236
Score = 129 (50.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 35/92 (38%), Positives = 48/92 (52%)
Query: 15 EYTGHKKKVHSVAWNCT-----GT-KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADS 68
E GH K V +AW GT +L S S D TAR+W + G+ + + L GH S
Sbjct: 233 ELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVNT---GRTEHV-LSGHKGS 288
Query: 69 VDQLCWDPKHAD-LIATASGDKTVRLWDARSG 99
V + W + ++ TAS DKTV++WDA G
Sbjct: 289 VSCVRWGAGNGTGVVYTASHDKTVKVWDAVKG 320
Score = 120 (47.3 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 64 GHADSVDQLC--WDPKHADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINITYKPDG 120
GH + + LC + P + +AT SGD T R+WDA +G + +G + +++ PDG
Sbjct: 150 GHGEPI--LCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDG 207
Query: 121 THIAVGNRDDELTILDVRKFKPIHRRKFGYE--VNEIAW 157
T +A + D + I D K + G+ V IAW
Sbjct: 208 TRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAW 246
Score = 100 (40.3 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 26/101 (25%), Positives = 42/101 (41%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+ P G A D+ LW+ + + T PV SFS + +AS+D
Sbjct: 419 VTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTT 478
Query: 236 IDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDK 275
+ + NV TG+ +P + V+W+P + G DK
Sbjct: 479 LKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDK 519
Score = 46 (21.3 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 16/61 (26%), Positives = 26/61 (42%)
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGD 273
V ++FS G IASA D + N G+ ++ + A + ++ LL A
Sbjct: 416 VNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASK 475
Query: 274 D 274
D
Sbjct: 476 D 476
Score = 44 (20.5 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 157 WNM-TGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLW 197
WN+ TG++ G+ Y + P G+ G D V LW
Sbjct: 482 WNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLW 524
Score = 44 (20.5 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 17/79 (21%), Positives = 27/79 (34%)
Query: 157 WNMTGEMFFLTT-GN-AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
WN F T G+ A Y + R S D+ + +W++ E
Sbjct: 440 WNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDE 499
Query: 215 VRTISFSHTGDYIASASED 233
V + +S G + S D
Sbjct: 500 VYGVDWSPDGQRVGSGGRD 518
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 143 (55.4 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 46/161 (28%), Positives = 75/161 (46%)
Query: 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
S + H V SV ++ G +L + S D++ +VW +E K L H + V
Sbjct: 95 STVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVER----KKFLYSLNRHTNWVRCA 150
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDE 131
+ P LIA+ D+TVRLWD S +C + G + + GT IA D+
Sbjct: 151 RFSPD-GRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNT 209
Query: 132 LTILDVRKFKPI-HRRKFGYEVNEIAWNMTGEMFFLTTGNA 171
+ I D+R K I H + VN +++ +G +L +G++
Sbjct: 210 IKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGN--YLISGSS 248
Score = 137 (53.3 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 36/141 (25%), Positives = 66/141 (46%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R + GHK + +N +LA+GS D++ +W++ P K + GH D + +
Sbjct: 12 RHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAP----KARAFRFVGHTDVITGVN 67
Query: 74 WDPKHADLIATASGDKTVRLWDAR-SGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
+ P L+A++S D+TVRLW G+ + + ++ + DG + + D +
Sbjct: 68 FAPS-GSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSV 126
Query: 133 TILDVRKFKPIHRRKFGYEVN 153
+ V R+KF Y +N
Sbjct: 127 KVWGVE------RKKFLYSLN 141
Score = 123 (48.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 38/150 (25%), Positives = 67/150 (44%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
H V ++ G +AS D+T R+W H + + G A VD
Sbjct: 143 HTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFT-DYGGSATFVDF----NSS 197
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILDV 137
IA++ D T+++WD R+ K Q ++ +N ++ P G ++ G+ D + ILD+
Sbjct: 198 GTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDL 257
Query: 138 ---RKFKPIHRRKFGYEVNEIAWNMTGEMF 164
R +H K G V + ++ G++F
Sbjct: 258 LEGRLIYTLHGHK-G-PVLTVTFSRDGDLF 285
Score = 118 (46.6 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 34/120 (28%), Positives = 50/120 (41%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
C P GR A D V LWD S C+ FT + F+ +G IAS+ D
Sbjct: 149 CARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADN 208
Query: 235 FIDISNVHTGRTV-HQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQAD--EG--VFRIYG 289
I I ++ T + + H A +N ++P N L D D EG ++ ++G
Sbjct: 209 TIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHG 268
Score = 115 (45.5 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 170 NAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIAS 229
NAG C + P G Y GS+DS + + D+ E + T + PV T++FS GD AS
Sbjct: 228 NAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFAS 287
Query: 230 ASED 233
D
Sbjct: 288 GGAD 291
Score = 50 (22.7 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 159 MTGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLW 197
+ G + + G+ G + G FA G ADS V +W
Sbjct: 258 LEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 203 (76.5 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 73/274 (26%), Positives = 124/274 (45%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH + +V ++ G LASGS D T ++W +P G + +E GH+ SV + + P
Sbjct: 39 GHSDWIETVTFSPDGRLLASGSNDTTIKLW--DPASGGLKQTLE--GHSSSVQSVAFSP- 93
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGT--HIAVGNRDDELT- 133
+ L+A+ S D T++LW++ S E + + ++ + P+G + A+G+ +
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEG 153
Query: 134 ----ILDVRKFKPIHRR-KFGYEVNEIA-WNMTGEMFFLTTGNAGCYCIAI--DPMGRYF 185
+L V F P + G I W+ T G + + + P GR
Sbjct: 154 HSDWVLSVA-FSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLL 212
Query: 186 AVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGR 245
A GS D+ + LWD T + +++FS G +AS S D I + + TG
Sbjct: 213 ASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGS 272
Query: 246 TVHQIPCRAAMN-SVEWNPKYNLL-AYAGDDKNK 277
H + + M SV ++P LL + +GD+ K
Sbjct: 273 FRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIK 306
Score = 178 (67.7 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 58/227 (25%), Positives = 103/227 (45%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDG 120
L GH+D ++ + + P L+A+ S D T++LWD SG Q E ++ ++ + P+G
Sbjct: 37 LEGHSDWIETVTFSPD-GRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNG 95
Query: 121 THIAVGNRDDELTILDVRKFKPIHRRKFGYE--VNEIAWNMTGEMFFLTTGNA-----G- 172
+A G+ D + + + H + G+ V +A++ G+++ G+ G
Sbjct: 96 QLLASGSSDTTIKLWNSASDSLKHTME-GHSDRVESVAFSPNGQLWNPAIGSLKHTIEGH 154
Query: 173 ---CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRTISFSHTGDYIA 228
+A P G+ A GSA+ + LWD + T W V + FS G +A
Sbjct: 155 SDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNW-VLPLVFSPDGRLLA 213
Query: 229 SASEDLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDD 274
S S D I + + +G H + + + S+ ++P LLA D
Sbjct: 214 SGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSD 260
Score = 150 (57.9 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 37/122 (30%), Positives = 66/122 (54%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V + ++ G LASGS D T ++W +P G +K L GH++ ++ L + P
Sbjct: 195 GHSNWVLPLVFSPDGRLLASGSNDATIKLW--DPPS-GSLKHT-LEGHSNKIESLAFSP- 249
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTI 134
+ L+A+ S D T++LWD +G S + L G + +++ + PD + G+ D+ + +
Sbjct: 250 NGQLLASGSSDATIKLWDTATG--SFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKL 307
Query: 135 LD 136
D
Sbjct: 308 WD 309
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 32/88 (36%), Positives = 50/88 (56%)
Query: 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQ 71
H+ E GH K+ S+A++ G LASGS D T ++W G + L+GH+D V
Sbjct: 233 HTLE--GHSNKIESLAFSPNGQLLASGSSDATIKLWDTAT---GSFRHT-LKGHSDMVLS 286
Query: 72 LCWDPKHADLIATASGDKTVRLWDARSG 99
+ + P + L+ + SGD T++LWD +G
Sbjct: 287 VVFSPD-SQLLESGSGDNTIKLWDPATG 313
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 201 (75.8 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 71/270 (26%), Positives = 121/270 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V + +N G+ L S S D+T VW E G +VK L+GH V+ C+ +
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET-GE-RVK--RLKGHTSFVNS-CYPAR 162
Query: 78 HA-DLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILD 136
L+ T S D TV+LWD R Q + + + + +T+ I G D+++ + D
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 137 VRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSL 196
+R+ K Y + A ++TG L+ + G Y ++ + M V
Sbjct: 223 LRQ------NKLTYTMRGHADSVTG----LSLSSEGSYLLS-NAMDNTVRVWDVRPFAP- 270
Query: 197 WDISEMLCVRTFT----KLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC 252
+ CVR F E + S+S G IA+ S D F+ + + + R ++++P
Sbjct: 271 ----KERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG 326
Query: 253 RA-AMNSVEWNPKYNLLAYAGDDKNKYQAD 281
A ++N V ++P ++ A DK Y +
Sbjct: 327 HAGSINEVAFHPDEPIILSASSDKRLYMGE 356
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 37/149 (24%), Positives = 77/149 (51%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
+GH+ +V+ ++ G+ LAS D+ +W++ +G + L+GH+ +V +L ++
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV----YGDCDNYATLKGHSGAVMELHYN 119
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPD-GTH-IAVGNRDDELT 133
++ +AS DKTV +WD+ +G+ ++ + +N Y G + G+ D +
Sbjct: 120 TD-GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 134 ILDVRKFKPIHRRKFGYEVNEIAWNMTGE 162
+ D+RK I + Y+V + +N T +
Sbjct: 179 LWDIRKKAAIQTFQNTYQVLAVTFNDTSD 207
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 204 (76.9 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 66/246 (26%), Positives = 107/246 (43%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + ++ WN G + S VD+T +W + H G+ K + A ++D + W +
Sbjct: 265 HKGPIFALKWNKKGNFILSAGVDKTTIIW--DAHT-GEAKQLFPFHSAPALD-VDWQSNN 320
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILDV 137
A+ S D + + + + + +N I + P G +A + D L I +
Sbjct: 321 T--FASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
Query: 138 RKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSL 196
++ +H + E+ I W+ TG T N + A S DS V L
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGP----GTSNPNANLM--------LASASFDSTVRL 426
Query: 197 WDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAM 256
WD+ +C+ T TK + PV +++FS G Y+AS S D + I N TG VH +
Sbjct: 427 WDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGI 486
Query: 257 NSVEWN 262
V WN
Sbjct: 487 FEVCWN 492
Score = 182 (69.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 48/172 (27%), Positives = 84/172 (48%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+ + GH +V+++ W+ TG LAS S D T ++W ++ V D L+ H + +
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC--VHD--LQAHNKEIYTIK 398
Query: 74 WDPK-------HADL-IATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIA 124
W P +A+L +A+AS D TVRLWD G C E + ++ + PDG ++A
Sbjct: 399 WSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA 458
Query: 125 VGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCI 176
G+ D + I + + +H + + E+ WN G+ + + G C+
Sbjct: 459 SGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASD-GSVCV 509
Score = 146 (56.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 50/219 (22%), Positives = 85/219 (38%)
Query: 58 KDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYK 117
K + LRGH V W+P +DL+A+ SGD T R+W+ S +L + +
Sbjct: 161 KAVVLRGHESEVFICAWNPV-SDLLASGSGDSTARIWNLSENSTSGSTQLV---LRHCIR 216
Query: 118 PDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAG-CYCI 176
G + N+D +T LD + Y+ W G + + G + +
Sbjct: 217 EGGQDVP-SNKD--VTSLDWNSEGTLLATG-SYDGFARIWTKDGNLASTLGQHKGPIFAL 272
Query: 177 AIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFI 236
+ G + D +WD + F P + + + AS S D+ I
Sbjct: 273 KWNKKGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTF-ASCSTDMCI 331
Query: 237 DISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDD 274
+ + R + +N+++W+P NLLA DD
Sbjct: 332 HVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDD 370
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 62/258 (24%), Positives = 100/258 (38%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-----GHAD----- 67
GH+ +V AWN LASGS D TAR+W++ + + LR G D
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNK 226
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN 127
V L W+ + L+AT S D R+W S + G + + G I
Sbjct: 227 DVTSLDWNSE-GTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAG 285
Query: 128 RDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAID-PMGRYFA 186
D I D H TGE L ++ + +D FA
Sbjct: 286 VDKTTIIWDA------H---------------TGEAKQLFPFHSAP-ALDVDWQSNNTFA 323
Query: 187 VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
S D + + + + ++TF V I + TG+ +AS S+D+ + I ++
Sbjct: 324 SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC 383
Query: 247 VHQIPCR-AAMNSVEWNP 263
VH + + +++W+P
Sbjct: 384 VHDLQAHNKEIYTIKWSP 401
Score = 115 (45.5 bits), Expect = 0.00071, P = 0.00071
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 19 HKKKVHSVAWNCTGT---------KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H K+++++ W+ TG LAS S D T R+W ++ G + L H + V
Sbjct: 390 HNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVD---RG-ICIHTLTKHQEPV 445
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
+ + P +A+ S DK V +W+ ++G +G + + G + D
Sbjct: 446 YSVAFSPD-GRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASD 504
Query: 130 DELTILDVRK 139
+ +LD+RK
Sbjct: 505 GSVCVLDLRK 514
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 202 (76.2 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 64/225 (28%), Positives = 105/225 (46%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V ++++ TG LAS S D T ++W + G ++ + GH +V +
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ--GFECIRT--MHGHDHNVSSVA 199
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKP--DGTHIAVGNRDDE 131
P + D I +AS DKT+++W+ ++G C + E + + +P DGT IA + D
Sbjct: 200 IMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQT 257
Query: 132 LTILDVR-KFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNA-GCYCIAIDPMGRYFAVGS 189
+ + V K R+ + V I+W E + T A G G + GS
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISW--APESSYSTISEATGSETKKSGKPGPFLLSGS 315
Query: 190 ADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASED 233
D + +WDIS +C+ T + W VR + F G +I S ++D
Sbjct: 316 RDKTIKMWDISTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 61/232 (26%), Positives = 105/232 (45%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V SVA G + S S D+T ++W ++ G+ VK GH + V ++
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT-GYC-VKTFT--GHREWV-RMV 240
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENIN--ITYKPDGTHIAVGNRDD 130
+ LIA+ S D+TVR+W + +C +AEL E++ I++ P+ ++ +
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKEC--KAELREHEHVVECISWAPESSYSTIS---- 294
Query: 131 ELTILDVRKF-KPIHRRKFGYEVNEIA-WNMTGEMFFLT-TGNAGCYCIAIDPMGRYFAV 187
E T + +K KP G I W+++ M +T G+ + G F +
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 188 GSADS-LVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
AD + +WD C++T E V ++ F T Y+ + S D + +
Sbjct: 355 SCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 151 (58.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH+ V V ++ + + S S D T +VW E + L+GH DSV + +D
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT----LKGHTDSVQDISFDH 160
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
L+A+ S D T++LWD + +C + N++ + P+G HI +RD + +
Sbjct: 161 T-GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 136 DVR 138
+V+
Sbjct: 220 EVQ 222
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRTISFSHTGDYIASASEDL 234
+AI P G + S D + +W++ CV+TFT EW VR + + G IAS S D
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQ 256
Query: 235 FIDISNVHTGRTVHQI-PCRAAMNSVEWNPK--YNLLAYAGDDKNKYQADEGVFRIYG 289
+ + V T ++ + + W P+ Y+ ++ A + K G F + G
Sbjct: 257 TVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSG 314
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/101 (31%), Positives = 46/101 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
I+ D G+ A SAD + LWD C+RT + V +++ GD+I SAS D
Sbjct: 156 ISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 236 IDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 275
I + V TG V R + V N L+A +D+
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Score = 39 (18.8 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 184 YFAVGSADSLVSLWD 198
Y GS D V +W+
Sbjct: 394 YVVTGSVDQTVKVWE 408
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 141 (54.7 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 45/161 (27%), Positives = 75/161 (46%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V VAW+ K+A+ ++ R+W + GK L+GH + L W+P
Sbjct: 180 GHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQT---GKQLGSTLKGHTKFITGLSWEPF 236
Query: 78 HAD----LIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTH--IAVGNRDDE 131
H + +A++S D T+R+WD S C LSG +++T G I G++D
Sbjct: 237 HLNPKCVRLASSSKDSTIRIWDTES--CKNLMSLSGHTMSVTCLKWGGEGLIYSGSQDRT 294
Query: 132 LTILDVRKFKPIHRRKFGYE--VNEIAWNMTGEMFFLTTGN 170
+ + + + + R G+ VN +A N + L TG+
Sbjct: 295 VRVFNTTDGRLV-RVLDGHAHWVNTLALNTD---YVLRTGS 331
Score = 124 (48.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 61/251 (24%), Positives = 102/251 (40%)
Query: 9 KNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWH---------IEPHGHGKVKD 59
KNL S +GH V + W G + SGS D+T RV++ ++ H H V
Sbjct: 263 KNLMS--LSGHTMSVTCLKWGGEGL-IYSGSQDRTVRVFNTTDGRLVRVLDGHAHW-VNT 318
Query: 60 IELRGHADSVDQL-CWDP--KHADLIATASGDKTVRLWDARSGKCSQQAELSGEN--INI 114
+ L + D V + +D K D + A R D ++ + +SG + I
Sbjct: 319 LAL--NTDYVLRTGSYDHTGKEYDTLEEAQRVALERYNDVKAKSKGMEILISGSDDFTVI 376
Query: 115 TYKPDGTHIAVGNRDDELTILDVRKFKPIHR--RKFGYEVNEIAWN-MTGEMFFLTTGNA 171
+ P T ++ ++++ F P R ++ + W+ +G+ G+
Sbjct: 377 MWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHV 436
Query: 172 GC-YCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA 230
G Y + RY GS DS + +WDI + V T+ +S GD +AS
Sbjct: 437 GAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVASG 496
Query: 231 SEDLFIDISNV 241
S+D + I V
Sbjct: 497 SKDRLLRIWTV 507
Score = 112 (44.5 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 33/125 (26%), Positives = 56/125 (44%)
Query: 155 IAWN--MTGEMFFLTTGNAGCY-CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 211
I WN +T TG+ ++ P GRYFA S D + LWD + F
Sbjct: 376 IMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGH 435
Query: 212 EWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAY 270
V + +S Y+ S S+D + I ++ T + ++P A + +V+W+P + +A
Sbjct: 436 VGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVAS 495
Query: 271 AGDDK 275
D+
Sbjct: 496 GSKDR 500
Score = 105 (42.0 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 36/133 (27%), Positives = 57/133 (42%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH + V + A++ G S D T R+W I + L+GH + V Q+ W P
Sbjct: 137 SGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDI----YTSTPTHTLKGHTNWVLQVAWSP 192
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT--------YKPDGTHIAVGNR 128
+ IATA + +R+W ++GK + L G IT P +A ++
Sbjct: 193 D-SKKIATAGMEGDIRIWCPQTGK-QLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSK 250
Query: 129 DDELTILDVRKFK 141
D + I D K
Sbjct: 251 DSTIRIWDTESCK 263
>ZFIN|ZDB-GENE-041014-277 [details] [associations]
symbol:wdr26b "WD repeat domain 26b" species:7955
"Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-041014-277 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AL929435 HSSP:P16649
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX004824 IPI:IPI00504405 RefSeq:NP_001189371.1
UniGene:Dr.156389 UniGene:Dr.79849 ProteinModelPortal:Q5SP67
PRIDE:Q5SP67 Ensembl:ENSDART00000029894 GeneID:564794
KEGG:dre:564794 CTD:564794 HOGENOM:HOG000160946 HOVERGEN:HBG083958
InParanoid:Q5SP67 OMA:IRGQFYQ OrthoDB:EOG4GHZNV NextBio:20885564
Bgee:Q5SP67 Uniprot:Q5SP67
Length = 576
Score = 155 (59.6 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 38/116 (32%), Positives = 58/116 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
T H +V ++ GTKLA+GS D T +W +EP H ++K + L GHA V L W
Sbjct: 264 TEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVEPDTH-QLKLLRTLEGHAYGVSYLAWS 322
Query: 76 PKHADLIATASGD-KTVRLWDARSGKCSQQAELSGEN--INITYKPDGTHIAVGNR 128
P LIA D + LW+ ++G+ + S E+ ++ + PDG G +
Sbjct: 323 PDDVYLIACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 378
Score = 97 (39.2 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 29/98 (29%), Positives = 48/98 (48%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTF---TKLEWPVRTISFSHTGDYIASASEDLFIDI 238
GR + A V LWD+ + + VR + T+ + + + H D+IAS SED + I
Sbjct: 450 GRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYI 509
Query: 239 SNVHTGRTVHQIPCRA-AMNSVEWNPKY-NLLAYAGDD 274
+ + + ++ +N V WNP +L+A A DD
Sbjct: 510 WHKRSELPIVELTGHTRTVNCVSWNPCIPSLMASASDD 547
Score = 72 (30.4 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 30/120 (25%), Positives = 49/120 (40%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR--SGKCSQQAELSGENINITY--- 116
L H + V C +AT S D TV +W + + L G ++Y
Sbjct: 263 LTEHCNEV-WFCKFSNDGTKLATGSKDTTVIIWQVEPDTHQLKLLRTLEGHAYGVSYLAW 321
Query: 117 KPDGTHIAVGNRDD--ELTILDVRKFKPIHRRKFGYE--VNEIAWNMTGEMFFLTTGNAG 172
PD ++ DD EL + +V+ + + +E + +AWN G+ F +T G G
Sbjct: 322 SPDDVYLIACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRF-VTGGQRG 380
Score = 60 (26.2 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V +AW+ L + D + +W G+++ + H DS+ +
Sbjct: 307 RTLEGHAYGVSYLAWSPDDVYLIACGPDDCSELWLWNVQT-GELRTKMSQSHEDSLTSVA 365
Query: 74 WDP 76
W+P
Sbjct: 366 WNP 368
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 147 (56.8 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 38/130 (29%), Positives = 62/130 (47%)
Query: 11 LHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI-ELRGHADSV 69
+HS+ T H + V SV ++ G LAS S D+T R + I + + E GH + +
Sbjct: 15 VHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGI 74
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN--ITYKPDGTHIAVGN 127
+ + A I +AS DKT++LWD +G + + N + + P I G+
Sbjct: 75 SDVAFS-SDARFIVSASDDKTLKLWDVETGSLIKTL-IGHTNYAFCVNFNPQSNMIVSGS 132
Query: 128 RDDELTILDV 137
D+ + I DV
Sbjct: 133 FDETVRIWDV 142
Score = 146 (56.5 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 55/224 (24%), Positives = 97/224 (43%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V +N + SGS D+T R+W + GK + L H+D V + ++ +
Sbjct: 111 GHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTT---GKCLKV-LPAHSDPVTAVDFN-R 165
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINITY---KPDGTHIAVGNRDDELTI 134
LI ++S D R+WD+ +G C + + EN +++ P+G I VG D+ L +
Sbjct: 166 DGSLIVSSSYDGLCRIWDSGTGHCVKTL-IDDENPPVSFVRFSPNGKFILVGTLDNTLRL 224
Query: 135 LDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLV 194
++ K + + + VN A F +T G + GS D+ V
Sbjct: 225 WNISSAKFL--KTYTGHVN--AQYCISSAFSVTNG-------------KRIVSGSEDNCV 267
Query: 195 SLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
+W+++ ++ V ++ T + IAS S D + I
Sbjct: 268 HMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRI 311
Score = 139 (54.0 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 35/124 (28%), Positives = 66/124 (53%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+E+TGH+ + VA++ + S S D+T ++W +E G +K L GH + +
Sbjct: 65 QEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVET-G-SLIKT--LIGHTNYAFCVN 120
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDEL 132
++P+ +++I + S D+TVR+WD +GKC + + + + + DG+ I + D
Sbjct: 121 FNPQ-SNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLC 179
Query: 133 TILD 136
I D
Sbjct: 180 RIWD 183
Score = 96 (38.9 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 29/106 (27%), Positives = 55/106 (51%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT---KLEWPVRTISFSHT-GDYIASAS 231
+ P G++ VG+ D+ + LW+IS ++T+T ++ + + +FS T G I S S
Sbjct: 204 VRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISS-AFSVTNGKRIVSGS 262
Query: 232 EDLFIDISNVHTGRTVHQIP--CRAAMNSVEWNPKYNLLAYAGDDK 275
ED + + +++ + + ++ MN V +P NL+A DK
Sbjct: 263 EDNCVHMWELNSKKLLQKLEGHTETVMN-VACHPTENLIASGSLDK 307
Score = 40 (19.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLW 197
+A P A GS D V +W
Sbjct: 291 VACHPTENLIASGSLDKTVRIW 312
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 199 (75.1 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 70/270 (25%), Positives = 121/270 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V + +N G+ L S S D+T VW E G +VK L+GH V+ C+ +
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET-GE-RVK--RLKGHTSFVNS-CYPAR 162
Query: 78 HA-DLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILD 136
L+ T S D TV+LWD R Q + + + + +T+ I G D+++ + D
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 137 VRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSL 196
+R+ K Y + A ++TG L+ + G Y ++ + M V
Sbjct: 223 LRQ------NKLTYTMRGHADSVTG----LSLSSEGSYLLS-NAMDNTVRVWDVRPFAP- 270
Query: 197 WDISEMLCVRTFT----KLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC 252
+ CV+ F E + S+S G IA+ S D F+ + + + R ++++P
Sbjct: 271 ----KERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPG 326
Query: 253 RA-AMNSVEWNPKYNLLAYAGDDKNKYQAD 281
A ++N V ++P ++ A DK Y +
Sbjct: 327 HAGSINEVAFHPDEPIILSASSDKRLYMGE 356
Score = 132 (51.5 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 36/149 (24%), Positives = 77/149 (51%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
+GH+ +V+ ++ G+ LAS D+ +W++ +G + L+GH+ +V +L ++
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV----YGDCDNYATLKGHSGAVMELHYN 119
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPD-GTH-IAVGNRDDELT 133
++ +AS DKTV +WD+ +G+ ++ + +N Y G + G+ D +
Sbjct: 120 TD-GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 134 ILDVRKFKPIHRRKFGYEVNEIAWNMTGE 162
+ D+RK + + Y+V + +N T +
Sbjct: 179 LWDIRKKAAVQTFQNTYQVLAVTFNDTSD 207
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 202 (76.2 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 65/246 (26%), Positives = 105/246 (42%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + ++ WN G + S VD+T +W + H G+ K + H+ + W +
Sbjct: 265 HKGPIFALKWNKKGNFILSAGVDKTTIIW--DAHT-GEAKQ-QFPFHSAPALDVDWQSNN 320
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILDV 137
A+ S D + + + + + +N I + P G +A + D L I +
Sbjct: 321 T--FASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
Query: 138 RKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSL 196
++ +H + E+ I W+ TG T N + A S DS V L
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGP----GTNNPNANLM--------LASASFDSTVRL 426
Query: 197 WDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAM 256
WD+ +C+ T TK + PV +++FS G Y+AS S D + I N TG VH +
Sbjct: 427 WDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGI 486
Query: 257 NSVEWN 262
V WN
Sbjct: 487 FEVCWN 492
Score = 182 (69.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 48/172 (27%), Positives = 84/172 (48%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+ + GH +V+++ W+ TG LAS S D T ++W ++ V D L+ H + +
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC--VHD--LQAHNKEIYTIK 398
Query: 74 WDPK-------HADL-IATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIA 124
W P +A+L +A+AS D TVRLWD G C E + ++ + PDG ++A
Sbjct: 399 WSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA 458
Query: 125 VGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCI 176
G+ D + I + + +H + + E+ WN G+ + + G C+
Sbjct: 459 SGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASD-GSVCV 509
Score = 146 (56.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 50/219 (22%), Positives = 85/219 (38%)
Query: 58 KDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYK 117
K + LRGH V W+P +DL+A+ SGD T R+W+ S +L + +
Sbjct: 161 KAVVLRGHESEVFICAWNPV-SDLLASGSGDSTARIWNLSENSTSGSTQLV---LRHCIR 216
Query: 118 PDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAG-CYCI 176
G + N+D +T LD + Y+ W G + + G + +
Sbjct: 217 EGGQDVP-SNKD--VTSLDWNSEGTLLATG-SYDGFARIWTKDGNLASTLGQHKGPIFAL 272
Query: 177 AIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFI 236
+ G + D +WD + F P + + + AS S D+ I
Sbjct: 273 KWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCI 331
Query: 237 DISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDD 274
+ + R + +N+++W+P NLLA DD
Sbjct: 332 HVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDD 370
Score = 136 (52.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 59/258 (22%), Positives = 98/258 (37%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-----GHAD----- 67
GH+ +V AWN LASGS D TAR+W++ + + LR G D
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNK 226
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN 127
V L W+ + L+AT S D R+W S + G + + G I
Sbjct: 227 DVTSLDWNSE-GTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAG 285
Query: 128 RDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFA 186
D I D + + F ++ W + N FA
Sbjct: 286 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ---------SNNT-------------FA 323
Query: 187 VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
S D + + + + ++TF V I + TG+ +AS S+D+ + I ++
Sbjct: 324 SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC 383
Query: 247 VHQIPCR-AAMNSVEWNP 263
VH + + +++W+P
Sbjct: 384 VHDLQAHNKEIYTIKWSP 401
Score = 115 (45.5 bits), Expect = 0.00071, P = 0.00071
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 19 HKKKVHSVAWNCTGT---------KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H K+++++ W+ TG LAS S D T R+W ++ G + L H + V
Sbjct: 390 HNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVD---RG-ICIHTLTKHQEPV 445
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
+ + P +A+ S DK V +W+ ++G +G + + G + D
Sbjct: 446 YSVAFSPD-GRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASD 504
Query: 130 DELTILDVRK 139
+ +LD+RK
Sbjct: 505 GSVCVLDLRK 514
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 202 (76.2 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 65/246 (26%), Positives = 105/246 (42%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + ++ WN G + S VD+T +W + H G+ K + H+ + W +
Sbjct: 265 HKGPIFALKWNKKGNFILSAGVDKTTIIW--DAHT-GEAKQ-QFPFHSAPALDVDWQSNN 320
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILDV 137
A+ S D + + + + + +N I + P G +A + D L I +
Sbjct: 321 T--FASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
Query: 138 RKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSL 196
++ +H + E+ I W+ TG T N + A S DS V L
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGP----GTNNPNANLM--------LASASFDSTVRL 426
Query: 197 WDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAM 256
WD+ +C+ T TK + PV +++FS G Y+AS S D + I N TG VH +
Sbjct: 427 WDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGI 486
Query: 257 NSVEWN 262
V WN
Sbjct: 487 FEVCWN 492
Score = 182 (69.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 48/172 (27%), Positives = 84/172 (48%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+ + GH +V+++ W+ TG LAS S D T ++W ++ V D L+ H + +
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC--VHD--LQAHNKEIYTIK 398
Query: 74 WDPK-------HADL-IATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIA 124
W P +A+L +A+AS D TVRLWD G C E + ++ + PDG ++A
Sbjct: 399 WSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA 458
Query: 125 VGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCI 176
G+ D + I + + +H + + E+ WN G+ + + G C+
Sbjct: 459 SGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASD-GSVCV 509
Score = 146 (56.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 50/219 (22%), Positives = 85/219 (38%)
Query: 58 KDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYK 117
K + LRGH V W+P +DL+A+ SGD T R+W+ S +L + +
Sbjct: 161 KAVVLRGHESEVFICAWNPV-SDLLASGSGDSTARIWNLSENSTSGSTQLV---LRHCIR 216
Query: 118 PDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAG-CYCI 176
G + N+D +T LD + Y+ W G + + G + +
Sbjct: 217 EGGQDVP-SNKD--VTSLDWNSEGTLLATG-SYDGFARIWTKDGNLASTLGQHKGPIFAL 272
Query: 177 AIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFI 236
+ G + D +WD + F P + + + AS S D+ I
Sbjct: 273 KWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCI 331
Query: 237 DISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDD 274
+ + R + +N+++W+P NLLA DD
Sbjct: 332 HVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDD 370
Score = 136 (52.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 59/258 (22%), Positives = 98/258 (37%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-----GHAD----- 67
GH+ +V AWN LASGS D TAR+W++ + + LR G D
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNK 226
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN 127
V L W+ + L+AT S D R+W S + G + + G I
Sbjct: 227 DVTSLDWNSE-GTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAG 285
Query: 128 RDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFA 186
D I D + + F ++ W + N FA
Sbjct: 286 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ---------SNNT-------------FA 323
Query: 187 VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
S D + + + + ++TF V I + TG+ +AS S+D+ + I ++
Sbjct: 324 SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC 383
Query: 247 VHQIPCR-AAMNSVEWNP 263
VH + + +++W+P
Sbjct: 384 VHDLQAHNKEIYTIKWSP 401
Score = 115 (45.5 bits), Expect = 0.00071, P = 0.00071
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 19 HKKKVHSVAWNCTGT---------KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H K+++++ W+ TG LAS S D T R+W ++ G + L H + V
Sbjct: 390 HNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVD---RG-ICIHTLTKHQEPV 445
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
+ + P +A+ S DK V +W+ ++G +G + + G + D
Sbjct: 446 YSVAFSPD-GRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASD 504
Query: 130 DELTILDVRK 139
+ +LD+RK
Sbjct: 505 GSVCVLDLRK 514
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 202 (76.2 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 65/246 (26%), Positives = 105/246 (42%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + ++ WN G + S VD+T +W + H G+ K + H+ + W +
Sbjct: 265 HKGPIFALKWNKKGNFILSAGVDKTTIIW--DAHT-GEAKQ-QFPFHSAPALDVDWQSNN 320
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILDV 137
A+ S D + + + + + +N I + P G +A + D L I +
Sbjct: 321 T--FASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
Query: 138 RKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSL 196
++ +H + E+ I W+ TG T N + A S DS V L
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGP----GTNNPNANLM--------LASASFDSTVRL 426
Query: 197 WDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAM 256
WD+ +C+ T TK + PV +++FS G Y+AS S D + I N TG VH +
Sbjct: 427 WDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGI 486
Query: 257 NSVEWN 262
V WN
Sbjct: 487 FEVCWN 492
Score = 182 (69.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 48/172 (27%), Positives = 84/172 (48%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+ + GH +V+++ W+ TG LAS S D T ++W ++ V D L+ H + +
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC--VHD--LQAHNKEIYTIK 398
Query: 74 WDPK-------HADL-IATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIA 124
W P +A+L +A+AS D TVRLWD G C E + ++ + PDG ++A
Sbjct: 399 WSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA 458
Query: 125 VGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCI 176
G+ D + I + + +H + + E+ WN G+ + + G C+
Sbjct: 459 SGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASD-GSVCV 509
Score = 145 (56.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 50/219 (22%), Positives = 85/219 (38%)
Query: 58 KDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYK 117
K + LRGH V W+P +DL+A+ SGD T R+W+ S +L + +
Sbjct: 161 KAVVLRGHESEVFICAWNPV-SDLLASGSGDSTARIWNLSENSTSGPTQLV---LRHCIR 216
Query: 118 PDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAG-CYCI 176
G + N+D +T LD + Y+ W G + + G + +
Sbjct: 217 EGGQDVP-SNKD--VTSLDWNSEGTLLATG-SYDGFARIWTKDGNLASTLGQHKGPIFAL 272
Query: 177 AIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFI 236
+ G + D +WD + F P + + + AS S D+ I
Sbjct: 273 KWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCI 331
Query: 237 DISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDD 274
+ + R + +N+++W+P NLLA DD
Sbjct: 332 HVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDD 370
Score = 136 (52.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 59/258 (22%), Positives = 98/258 (37%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-----GHAD----- 67
GH+ +V AWN LASGS D TAR+W++ + + LR G D
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNK 226
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN 127
V L W+ + L+AT S D R+W S + G + + G I
Sbjct: 227 DVTSLDWNSE-GTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAG 285
Query: 128 RDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFA 186
D I D + + F ++ W + N FA
Sbjct: 286 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ---------SNNT-------------FA 323
Query: 187 VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
S D + + + + ++TF V I + TG+ +AS S+D+ + I ++
Sbjct: 324 SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC 383
Query: 247 VHQIPCR-AAMNSVEWNP 263
VH + + +++W+P
Sbjct: 384 VHDLQAHNKEIYTIKWSP 401
Score = 115 (45.5 bits), Expect = 0.00071, P = 0.00071
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 19 HKKKVHSVAWNCTGT---------KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H K+++++ W+ TG LAS S D T R+W ++ G + L H + V
Sbjct: 390 HNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVD---RG-ICIHTLTKHQEPV 445
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
+ + P +A+ S DK V +W+ ++G +G + + G + D
Sbjct: 446 YSVAFSPD-GRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASD 504
Query: 130 DELTILDVRK 139
+ +LD+RK
Sbjct: 505 GSVCVLDLRK 514
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 202 (76.2 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 65/246 (26%), Positives = 105/246 (42%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + ++ WN G + S VD+T +W + H G+ K + H+ + W +
Sbjct: 265 HKGPIFALKWNKKGNFILSAGVDKTTIIW--DAHT-GEAKQ-QFPFHSAPALDVDWQSNN 320
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILDV 137
A+ S D + + + + + +N I + P G +A + D L I +
Sbjct: 321 T--FASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
Query: 138 RKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSL 196
++ +H + E+ I W+ TG T N + A S DS V L
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGP----GTNNPNANLM--------LASASFDSTVRL 426
Query: 197 WDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAM 256
WD+ +C+ T TK + PV +++FS G Y+AS S D + I N TG VH +
Sbjct: 427 WDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGI 486
Query: 257 NSVEWN 262
V WN
Sbjct: 487 FEVCWN 492
Score = 182 (69.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 48/172 (27%), Positives = 84/172 (48%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+ + GH +V+++ W+ TG LAS S D T ++W ++ V D L+ H + +
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC--VHD--LQAHNKEIYTIK 398
Query: 74 WDPK-------HADL-IATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIA 124
W P +A+L +A+AS D TVRLWD G C E + ++ + PDG ++A
Sbjct: 399 WSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA 458
Query: 125 VGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCI 176
G+ D + I + + +H + + E+ WN G+ + + G C+
Sbjct: 459 SGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASD-GSVCV 509
Score = 145 (56.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 50/219 (22%), Positives = 85/219 (38%)
Query: 58 KDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYK 117
K + LRGH V W+P +DL+A+ SGD T R+W+ S +L + +
Sbjct: 161 KAVVLRGHESEVFICAWNPV-SDLLASGSGDSTARIWNLSENSTSGPTQLV---LRHCIR 216
Query: 118 PDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAG-CYCI 176
G + N+D +T LD + Y+ W G + + G + +
Sbjct: 217 EGGQDVP-SNKD--VTSLDWNSEGTLLATG-SYDGFARIWTKDGNLASTLGQHKGPIFAL 272
Query: 177 AIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFI 236
+ G + D +WD + F P + + + AS S D+ I
Sbjct: 273 KWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCI 331
Query: 237 DISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDD 274
+ + R + +N+++W+P NLLA DD
Sbjct: 332 HVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDD 370
Score = 136 (52.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 59/258 (22%), Positives = 98/258 (37%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-----GHAD----- 67
GH+ +V AWN LASGS D TAR+W++ + + LR G D
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNK 226
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN 127
V L W+ + L+AT S D R+W S + G + + G I
Sbjct: 227 DVTSLDWNSE-GTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAG 285
Query: 128 RDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFA 186
D I D + + F ++ W + N FA
Sbjct: 286 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ---------SNNT-------------FA 323
Query: 187 VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
S D + + + + ++TF V I + TG+ +AS S+D+ + I ++
Sbjct: 324 SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC 383
Query: 247 VHQIPCR-AAMNSVEWNP 263
VH + + +++W+P
Sbjct: 384 VHDLQAHNKEIYTIKWSP 401
Score = 115 (45.5 bits), Expect = 0.00071, P = 0.00071
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 19 HKKKVHSVAWNCTGT---------KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H K+++++ W+ TG LAS S D T R+W ++ G + L H + V
Sbjct: 390 HNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVD---RG-ICIHTLTKHQEPV 445
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
+ + P +A+ S DK V +W+ ++G +G + + G + D
Sbjct: 446 YSVAFSPD-GRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASD 504
Query: 130 DELTILDVRK 139
+ +LD+RK
Sbjct: 505 GSVCVLDLRK 514
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 202 (76.2 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 69/261 (26%), Positives = 114/261 (43%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + ++ WN G + S VD+T +W + H G+ K + H+ + W ++
Sbjct: 278 HKGPIFALKWNKKGNYILSAGVDKTTIIW--DAHT-GEAKQ-QFPFHSAPALDVDW--QN 331
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAE-LSGEN--IN-ITYKPDGTHIAVGNRDDELTI 134
A+ S D + + R G C + + G +N I + P G +A + D L I
Sbjct: 332 NTTFASCSTDMCIHV--CRLG-CDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKI 388
Query: 135 LDVRKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSL 193
+++ +H + E+ I W+ TG T N + A S DS
Sbjct: 389 WSMKQDACVHDLQAHSKEIYTIKWSPTGP----ATSNPNSNIM--------LASASFDST 436
Query: 194 VSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCR 253
V LWD+ +C+ T TK + PV +++FS G Y+AS S D + I N +G VH
Sbjct: 437 VRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGT 496
Query: 254 AAMNSVEWNPKYNLLAYAGDD 274
+ V WN + + + + D
Sbjct: 497 GGIFEVCWNARGDKVGASASD 517
Score = 179 (68.1 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 45/172 (26%), Positives = 85/172 (49%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+ + GH +V+++ W+ +G LAS S D T ++W ++ V D L+ H+ + +
Sbjct: 356 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDAC--VHD--LQAHSKEIYTIK 411
Query: 74 WDPK-------HADL-IATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIA 124
W P ++++ +A+AS D TVRLWD G C E + ++ + PDG ++A
Sbjct: 412 WSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLA 471
Query: 125 VGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCI 176
G+ D + I + + +H + + E+ WN G+ + + G C+
Sbjct: 472 SGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASD-GSVCV 522
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 51/215 (23%), Positives = 83/215 (38%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGT 121
LRGH V W+P +DL+A+ SGD T R+W+ +L + I +G
Sbjct: 178 LRGHESEVFICAWNPV-SDLLASGSGDSTARIWNLNENSNGGSTQLVLRHC-IR---EGG 232
Query: 122 HIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAG-CYCIAIDP 180
H N+D +T LD + Y+ W G + + G + + +
Sbjct: 233 HDVPSNKD--VTSLDWNSDGTLLATG-SYDGFARIWTEDGNLASTLGQHKGPIFALKWNK 289
Query: 181 MGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISN 240
G Y D +WD + F P + + + + AS S D+ I +
Sbjct: 290 KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCR 348
Query: 241 VHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDD 274
+ R V +N+++W+P LLA DD
Sbjct: 349 LGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 383
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 61/258 (23%), Positives = 99/258 (38%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR------GHA----D 67
GH+ +V AWN LASGS D TAR+W++ + +G + LR GH
Sbjct: 180 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 239
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN 127
V L W+ L+AT S D R+W S + G + + G +I
Sbjct: 240 DVTSLDWN-SDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAG 298
Query: 128 RDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFA 186
D I D + + F ++ W TT FA
Sbjct: 299 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN------TT----------------FA 336
Query: 187 VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
S D + + + V+TF V I + +G +AS S+D+ + I ++
Sbjct: 337 SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDAC 396
Query: 247 VHQIPCRAA-MNSVEWNP 263
VH + + + +++W+P
Sbjct: 397 VHDLQAHSKEIYTIKWSP 414
Score = 124 (48.7 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 35/130 (26%), Positives = 58/130 (44%)
Query: 19 HKKKVHSVAWNCTGTK---------LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H K+++++ W+ TG LAS S D T R+W +E G V L H + V
Sbjct: 403 HSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVE---RG-VCIHTLTKHQEPV 458
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
+ + P +A+ S DK V +W+ +SG +G + + G + D
Sbjct: 459 YSVAFSPD-GKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASD 517
Query: 130 DELTILDVRK 139
+ +LD+RK
Sbjct: 518 GSVCVLDLRK 527
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 202 (76.2 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 69/261 (26%), Positives = 114/261 (43%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + ++ WN G + S VD+T +W + H G+ K + H+ + W ++
Sbjct: 278 HKGPIFALKWNKKGNYILSAGVDKTTIIW--DAHT-GEAKQ-QFPFHSAPALDVDW--QN 331
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAE-LSGEN--IN-ITYKPDGTHIAVGNRDDELTI 134
A+ S D + + R G C + + G +N I + P G +A + D L I
Sbjct: 332 NTTFASCSTDMCIHV--CRLG-CDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKI 388
Query: 135 LDVRKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSL 193
+++ +H + E+ I W+ TG T N + A S DS
Sbjct: 389 WSMKQDACVHDLQAHSKEIYTIKWSPTGP----ATSNPNSNIM--------LASASFDST 436
Query: 194 VSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCR 253
V LWD+ +C+ T TK + PV +++FS G Y+AS S D + I N +G VH
Sbjct: 437 VRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGT 496
Query: 254 AAMNSVEWNPKYNLLAYAGDD 274
+ V WN + + + + D
Sbjct: 497 GGIFEVCWNARGDKVGASASD 517
Score = 179 (68.1 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 45/172 (26%), Positives = 85/172 (49%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+ + GH +V+++ W+ +G LAS S D T ++W ++ V D L+ H+ + +
Sbjct: 356 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDAC--VHD--LQAHSKEIYTIK 411
Query: 74 WDPK-------HADL-IATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIA 124
W P ++++ +A+AS D TVRLWD G C E + ++ + PDG ++A
Sbjct: 412 WSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLA 471
Query: 125 VGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCI 176
G+ D + I + + +H + + E+ WN G+ + + G C+
Sbjct: 472 SGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASD-GSVCV 522
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 51/215 (23%), Positives = 83/215 (38%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGT 121
LRGH V W+P +DL+A+ SGD T R+W+ +L + I +G
Sbjct: 178 LRGHESEVFICAWNPV-SDLLASGSGDSTARIWNLNENSNGGSTQLVLRHC-IR---EGG 232
Query: 122 HIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAG-CYCIAIDP 180
H N+D +T LD + Y+ W G + + G + + +
Sbjct: 233 HDVPSNKD--VTSLDWNSDGTLLATG-SYDGFARIWTEDGNLASTLGQHKGPIFALKWNK 289
Query: 181 MGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISN 240
G Y D +WD + F P + + + + AS S D+ I +
Sbjct: 290 KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCR 348
Query: 241 VHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDD 274
+ R V +N+++W+P LLA DD
Sbjct: 349 LGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 383
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 61/258 (23%), Positives = 99/258 (38%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR------GHA----D 67
GH+ +V AWN LASGS D TAR+W++ + +G + LR GH
Sbjct: 180 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 239
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN 127
V L W+ L+AT S D R+W S + G + + G +I
Sbjct: 240 DVTSLDWN-SDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAG 298
Query: 128 RDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFA 186
D I D + + F ++ W TT FA
Sbjct: 299 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN------TT----------------FA 336
Query: 187 VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
S D + + + V+TF V I + +G +AS S+D+ + I ++
Sbjct: 337 SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDAC 396
Query: 247 VHQIPCRAA-MNSVEWNP 263
VH + + + +++W+P
Sbjct: 397 VHDLQAHSKEIYTIKWSP 414
Score = 124 (48.7 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 35/130 (26%), Positives = 58/130 (44%)
Query: 19 HKKKVHSVAWNCTGTK---------LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H K+++++ W+ TG LAS S D T R+W +E G V L H + V
Sbjct: 403 HSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVE---RG-VCIHTLTKHQEPV 458
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
+ + P +A+ S DK V +W+ +SG +G + + G + D
Sbjct: 459 YSVAFSPD-GKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASD 517
Query: 130 DELTILDVRK 139
+ +LD+RK
Sbjct: 518 GSVCVLDLRK 527
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 140 (54.3 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 37/132 (28%), Positives = 63/132 (47%)
Query: 4 SSIPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR 63
+S P + R + GHK + S ++ ++A+ S D +W ++PH
Sbjct: 2 ASGPEDPILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARA----YRYV 57
Query: 64 GHADSVDQLCWDPKHADLIATASGDKTVRLWDA-RSGKCSQQAELSGENINITYKPDGTH 122
GH D V L + P+ +L+A+AS DKTVRLW R GK S+ + ++ + DG
Sbjct: 58 GHKDVVTSLQFSPQ-GNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQF 116
Query: 123 IAVGNRDDELTI 134
+ + D + +
Sbjct: 117 LVTASEDKSIKV 128
Score = 126 (49.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 43/162 (26%), Positives = 74/162 (45%)
Query: 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
S E+ H V SV ++ G L + S D++ +VW + + + L H V
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSM----YRQRFLYSLYRHTHWVRCA 150
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDE 131
+ P LI + S DKT+++WD S +C S N + + P+GT IA D
Sbjct: 151 KFSPD-GRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHA 209
Query: 132 LTILDVRKFKPI-HRRKFGYEVNEIAWNMTGEMFFLTTGNAG 172
+ I D+R + + H + VN ++++ +G +T + G
Sbjct: 210 VRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSL-VTASSDG 250
Score = 115 (45.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 35/128 (27%), Positives = 56/128 (43%)
Query: 12 HSR--EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H+R Y GHK V S+ ++ G LAS S D+T R+W ++ G K E + H V
Sbjct: 50 HARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKG----KSSEFKAHTAPV 105
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT-YKPDGTHIAVGNR 128
+ + + TAS DK++++W + + + PDG I +
Sbjct: 106 RSVDFSAD-GQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 129 DDELTILD 136
D + I D
Sbjct: 165 DKTIKIWD 172
Score = 110 (43.8 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 31/121 (25%), Positives = 47/121 (38%)
Query: 157 WNMTGEMFF--LTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+M + F L C P GR S D + +WD + CV F+
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGF 188
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGD 273
+ FS G IASA D + I ++ R + + +N + ++P N L A
Sbjct: 189 ANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASS 248
Query: 274 D 274
D
Sbjct: 249 D 249
Score = 86 (35.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 25/95 (26%), Positives = 40/95 (42%)
Query: 182 GRYFAVGSADSLVSLWDI-SEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISN 240
G++ S D + +W + + + W VR FS G I S SED I I +
Sbjct: 114 GQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 241 VHTGRTVHQIPCRAAM-NSVEWNPKYNLLAYAGDD 274
+ + V+ N V+++P +A AG D
Sbjct: 173 TTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSD 207
Score = 85 (35.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 170 NAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIAS 229
+ G C++ P G S+D V + D+ E + T PV T+SFS G+ S
Sbjct: 228 SCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTS 287
Query: 230 ASED 233
D
Sbjct: 288 GGAD 291
Score = 74 (31.1 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+ P G A +D V +WDI ++ + V +SF +G+ + +AS D
Sbjct: 192 VDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGT 251
Query: 236 IDISNVHTGRTVHQI 250
+ I ++ GR ++ +
Sbjct: 252 VKILDLVEGRLIYTL 266
Score = 52 (23.4 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 161 GEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDIS 200
G + + G+ G + ++ G F G AD+ V +W S
Sbjct: 260 GRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRTS 300
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 198 (74.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 70/270 (25%), Positives = 121/270 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V + +N G+ L S S D+T VW E G +VK L+GH V+ C+ +
Sbjct: 107 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET-GE-RVK--RLKGHTSFVNS-CYPAR 161
Query: 78 HA-DLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILD 136
L+ T S D TV+LWD R Q + + + + +T+ I G D+++ + D
Sbjct: 162 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 221
Query: 137 VRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSL 196
+R+ K Y + A ++TG L+ + G Y ++ + M V
Sbjct: 222 LRQ------NKLTYTMRGHADSVTG----LSLSSEGSYLLS-NAMDNTVRVWDVRPFAP- 269
Query: 197 WDISEMLCVRTFT----KLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC 252
+ CV+ F E + S+S G IA+ S D F+ + + + R ++++P
Sbjct: 270 ----KERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG 325
Query: 253 RA-AMNSVEWNPKYNLLAYAGDDKNKYQAD 281
A ++N V ++P ++ A DK Y +
Sbjct: 326 HAGSINEVAFHPDEPIIISASSDKRLYMGE 355
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 37/149 (24%), Positives = 77/149 (51%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
+GH+ +V+ ++ G+ LAS D+ +W++ +G + L+GH+ +V +L ++
Sbjct: 63 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV----YGDCDNYATLKGHSGAVMELHYN 118
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPD-GTH-IAVGNRDDELT 133
++ +AS DKTV +WD+ +G+ ++ + +N Y G + G+ D +
Sbjct: 119 TD-GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 177
Query: 134 ILDVRKFKPIHRRKFGYEVNEIAWNMTGE 162
+ D+RK I + Y+V + +N T +
Sbjct: 178 LWDIRKKAAIQTFQNTYQVLAVTFNDTSD 206
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 198 (74.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 70/270 (25%), Positives = 121/270 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V + +N G+ L S S D+T VW E G +VK L+GH V+ C+ +
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET-GE-RVK--RLKGHTSFVNS-CYPAR 162
Query: 78 HA-DLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILD 136
L+ T S D TV+LWD R Q + + + + +T+ I G D+++ + D
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 137 VRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSL 196
+R+ K Y + A ++TG L+ + G Y ++ + M V
Sbjct: 223 LRQ------NKLTYTMRGHADSVTG----LSLSSEGSYLLS-NAMDNTVRVWDVRPFAP- 270
Query: 197 WDISEMLCVRTFT----KLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC 252
+ CV+ F E + S+S G IA+ S D F+ + + + R ++++P
Sbjct: 271 ----KERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG 326
Query: 253 RA-AMNSVEWNPKYNLLAYAGDDKNKYQAD 281
A ++N V ++P ++ A DK Y +
Sbjct: 327 HAGSINEVAFHPDEPIILSASSDKRLYMGE 356
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 37/149 (24%), Positives = 77/149 (51%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
+GH+ +V+ ++ G+ LAS D+ +W++ +G + L+GH+ +V +L ++
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV----YGDCDNYATLKGHSGAVMELHYN 119
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPD-GTH-IAVGNRDDELT 133
++ +AS DKTV +WD+ +G+ ++ + +N Y G + G+ D +
Sbjct: 120 TD-GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 134 ILDVRKFKPIHRRKFGYEVNEIAWNMTGE 162
+ D+RK I + Y+V + +N T +
Sbjct: 179 LWDIRKKAAIQTFQNTYQVLAVTFNDTSD 207
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 198 (74.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 70/270 (25%), Positives = 121/270 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V + +N G+ L S S D+T VW E G +VK L+GH V+ C+ +
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET-GE-RVK--RLKGHTSFVNS-CYPAR 162
Query: 78 HA-DLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILD 136
L+ T S D TV+LWD R Q + + + + +T+ I G D+++ + D
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 137 VRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSL 196
+R+ K Y + A ++TG L+ + G Y ++ + M V
Sbjct: 223 LRQ------NKLTYTMRGHADSVTG----LSLSSEGSYLLS-NAMDNTVRVWDVRPFAP- 270
Query: 197 WDISEMLCVRTFT----KLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC 252
+ CV+ F E + S+S G IA+ S D F+ + + + R ++++P
Sbjct: 271 ----KERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG 326
Query: 253 RA-AMNSVEWNPKYNLLAYAGDDKNKYQAD 281
A ++N V ++P ++ A DK Y +
Sbjct: 327 HAGSINEVAFHPDEPIILSASSDKRLYMGE 356
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 37/149 (24%), Positives = 77/149 (51%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
+GH+ +V+ ++ G+ LAS D+ +W++ +G + L+GH+ +V +L ++
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV----YGDCDNYATLKGHSGAVMELHYN 119
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPD-GTH-IAVGNRDDELT 133
++ +AS DKTV +WD+ +G+ ++ + +N Y G + G+ D +
Sbjct: 120 TD-GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 134 ILDVRKFKPIHRRKFGYEVNEIAWNMTGE 162
+ D+RK I + Y+V + +N T +
Sbjct: 179 LWDIRKKAAIQTFQNTYQVLAVTFNDTSD 207
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 201 (75.8 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 55/175 (31%), Positives = 89/175 (50%)
Query: 2 GESSIPFKNLHSREYT----GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKV 57
G+S+I +L+ E T GH V S W+ G +AS S+D T+++W + +
Sbjct: 422 GDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSE---RC 478
Query: 58 KDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITY 116
+ L GH DSV+ + + P ++++ TAS DKT+ +WDAR+GKC Q ++N T+
Sbjct: 479 R-YTLYGHTDSVNSIEFFP-FSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATF 536
Query: 117 KPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEV-NEIAWNMTGEMFFLTTGN 170
P G IA + + D RK PI G NE+ ++ +G + + N
Sbjct: 537 TPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSGRVLAQASAN 591
Score = 132 (51.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 38/150 (25%), Positives = 70/150 (46%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH + ++ +G+KLA+ S D T ++W + G+ + L GH +V W
Sbjct: 399 SGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNK---GECT-LTLEGHNHAVWSCTWH- 453
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
D +A+AS D T ++WD S +C +++N I + P + + D L++
Sbjct: 454 SCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVW 513
Query: 136 DVRKFKPIHRRKFGY--EVNEIAWNMTGEM 163
D R K + +G+ VN+ + G +
Sbjct: 514 DARTGK-CEQSLYGHMHSVNDATFTPRGHI 542
Score = 128 (50.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 40/128 (31%), Positives = 63/128 (49%)
Query: 157 WNMTG--EMFFLTTGN------AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 208
W M G + L TG+ +GC C P G A S DS + LWD+++ C T
Sbjct: 384 WKMVGLPQGNVLLTGSGHTDWLSGC-CF--HPSGSKLATSSGDSTIKLWDLNKGECTLTL 440
Query: 209 TKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNL 267
V + ++ GD++ASAS D+ I +V++ R + + ++NS+E+ P N+
Sbjct: 441 EGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNI 500
Query: 268 LAYAGDDK 275
L A DK
Sbjct: 501 LLTASADK 508
Score = 110 (43.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 35/120 (29%), Positives = 54/120 (45%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
H+ V + + L S S D R+W + G V + GH D + C+ P
Sbjct: 359 HELPVSCIVMHPCRDYLISCSED---RLWKMVGLPQGNVL-LTGSGHTDWLSGCCFHPSG 414
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTILDV 137
+ L AT+SGD T++LWD G+C+ E + + T+ G +A + D I DV
Sbjct: 415 SKL-ATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDV 473
Score = 61 (26.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 15/71 (21%), Positives = 34/71 (47%)
Query: 180 PMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDIS 239
P G A A + LWD +++ + + ++F +G +A AS + I +
Sbjct: 538 PRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSGRVLAQASANGIIHLL 597
Query: 240 NVHTGRTVHQI 250
++ +G+ +H++
Sbjct: 598 DLKSGQ-IHKL 607
Score = 53 (23.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 14/50 (28%), Positives = 20/50 (40%)
Query: 180 PMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIAS 229
P SAD +S+WD C ++ V +F+ G IAS
Sbjct: 496 PFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIAS 545
Score = 37 (18.1 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 7/38 (18%), Positives = 16/38 (42%)
Query: 160 TGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLW 197
+G++ L + + + +G G +D + LW
Sbjct: 601 SGQIHKLVGHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 175 (66.7 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 58/205 (28%), Positives = 106/205 (51%)
Query: 9 KNLHSREYTGHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHAD 67
+ LH+ E GH+ V+++A+N G K+A+GS D+T ++W +E GK RGH
Sbjct: 125 EELHTLE--GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVET---GKCYHT-FRGHTA 178
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG---ENINITYKPDGTHIA 124
+ L ++P+ + L+AT S D T +LWD +SG+ + L+G E I++++ G I
Sbjct: 179 EIVCLSFNPQ-STLVATGSMDTTAKLWDIQSGE--EVFTLTGHSAEIISLSFNTSGNRII 235
Query: 125 VGNRDDELTILDVRKFKPIHRRKFGY--EVNEIAWNMTGEMFFLTTGNAGCYCIAIDPM- 181
G+ D +T+ + + ++ G+ E++ +N + + TG+ C D +
Sbjct: 236 TGSFDHTVTVWEADTGRKVYTL-IGHCAEISSAVFNW--DCSLILTGSMDKTCKLWDAVN 292
Query: 182 GRYFAV--GSADSLV-SLWDISEML 203
G+ A G D ++ S +D + L
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKL 317
Score = 158 (60.7 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 50/162 (30%), Positives = 81/162 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC--W 74
TGH ++ S+++N +G ++ +GS D T VW + G+ K L GH + W
Sbjct: 216 TGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADT---GR-KVYTLIGHCAEISSAVFNW 271
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSG---ENINITYKPDGTHIAVGNRDDE 131
D LI T S DKT +LWDA +GKC A L+G E ++ + G IA + D
Sbjct: 272 D---CSLILTGSMDKTCKLWDAVNGKCV--ATLTGHDDEILDSCFDYTGKLIATASADGT 326
Query: 132 LTILDVRKFKPIHRRKFGYE--VNEIAWNMTGEMFFLTTGNA 171
I + + + + G+E +++I++N G L TG++
Sbjct: 327 ARIFSAATRECVTKLE-GHEGEISKISFNPQGNR--LLTGSS 365
Score = 153 (58.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 48/165 (29%), Positives = 81/165 (49%)
Query: 16 YT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
YT GH ++ S +N + + +GS+D+T ++W +GK L GH D + C
Sbjct: 255 YTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAV---NGKCV-ATLTGHDDEILDSC 310
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDEL 132
+D LIATAS D T R++ A + +C + E GE I++ P G + G+ D
Sbjct: 311 FDYT-GKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTA 369
Query: 133 TILDVRKFKPIHRRKFGY--EVNEIAWNMTGEMFFLTTGNAGCYC 175
I D + + + + G+ E+ A+N G++ + TG+ C
Sbjct: 370 RIWDAQTGQCLQVLE-GHTDEIFSCAFNYKGDI--IITGSKDNTC 411
Score = 151 (58.2 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 51/195 (26%), Positives = 94/195 (48%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
H + +VA N +G+ +GS D+T ++W G ++ +E GH + V + ++ +
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTAS-GE-ELHTLE--GHRNVVYAIAFNNPY 146
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDV 137
D IAT S DKT +LW +GKC + E + +++ P T +A G+ D + D+
Sbjct: 147 GDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI 206
Query: 138 RKFKPIHRRKFGY--EVNEIAWNMTGEMFFLTTGNAGCYCIAI--DPMGR--YFAVGSA- 190
+ + + G+ E+ +++N +G + TG+ + + + GR Y +G
Sbjct: 207 QSGEEVFTLT-GHSAEIISLSFNTSGNR--IITGSFD-HTVTVWEADTGRKVYTLIGHCA 262
Query: 191 --DSLVSLWDISEML 203
S V WD S +L
Sbjct: 263 EISSAVFNWDCSLIL 277
Score = 141 (54.7 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 35/119 (29%), Positives = 62/119 (52%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
TGH ++ ++ TG +A+ S D TAR++ + +L GH + ++ ++P
Sbjct: 300 TGHDDEILDSCFDYTGKLIATASADGTARIFSAAT----RECVTKLEGHEGEISKISFNP 355
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTI 134
+ L+ T S DKT R+WDA++G+C Q E + I + + G I G++D+ I
Sbjct: 356 QGNRLL-TGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRI 413
Score = 126 (49.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 26/77 (33%), Positives = 44/77 (57%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH+ ++ +++N G +L +GS D+TAR+W + G+ + L GH D + ++ K
Sbjct: 343 GHEGEISKISFNPQGNRLLTGSSDKTARIWDAQT---GQCLQV-LEGHTDEIFSCAFNYK 398
Query: 78 HADLIATASGDKTVRLW 94
D+I T S D T R+W
Sbjct: 399 -GDIIITGSKDNTCRIW 414
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 35/123 (28%), Positives = 60/123 (48%)
Query: 157 WNM-TGEMFFLTTGN-AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ TG+ + G+ A C++ +P A GS D+ LWDI V T T
Sbjct: 162 WSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAE 221
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQI--PCRAAMNSVEWNPKYNLLAYAG 272
+ ++SF+ +G+ I + S D + + TGR V+ + C A ++S +N +L+
Sbjct: 222 IISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHC-AEISSAVFNWDCSLILTGS 280
Query: 273 DDK 275
DK
Sbjct: 281 MDK 283
Score = 94 (38.1 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 27/89 (30%), Positives = 39/89 (43%)
Query: 188 GSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTV 247
GS D LWD CV T T + + F +TG IA+AS D I + T V
Sbjct: 279 GSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECV 338
Query: 248 HQIPCRAA-MNSVEWNPKYNLLAYAGDDK 275
++ ++ + +NP+ N L DK
Sbjct: 339 TKLEGHEGEISKISFNPQGNRLLTGSSDK 367
Score = 77 (32.2 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
I+ +P G GS+D +WD C++ + + +F++ GD I + S+D
Sbjct: 351 ISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKD 408
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 187 (70.9 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 48/157 (30%), Positives = 80/157 (50%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75
+ GH + V S W+ G +AS S+D+T+++W + + + L GH DSV+ + +
Sbjct: 432 FEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSE---RCR-CTLYGHTDSVNSIEFF 487
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTI 134
P ++ + T+S DKT+ +WDAR+G C Q +IN + P G IA + +
Sbjct: 488 P-FSNTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKL 546
Query: 135 LDVRKFKPIHRRKFGYEV-NEIAWNMTGEMFFLTTGN 170
D RK PI G NE+ ++ +G + +GN
Sbjct: 547 WDFRKLLPIVSIDIGPSPGNEVNFDSSGRVLAQASGN 583
Score = 115 (45.5 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 38/151 (25%), Positives = 71/151 (47%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH + ++ +G KLA+ S D T ++W + G + GH+ +V W
Sbjct: 392 GHTDWLSDCCFHPSGDKLATSSGDTTVKLWDL---CKGDCI-LTFEGHSRAVWSCTWH-S 446
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSG--ENIN-ITYKPDGTHIAVGNRDDELTI 134
+ +A++S DKT ++WD S +C + L G +++N I + P + + D L+I
Sbjct: 447 CGNFVASSSLDKTSKIWDVNSERC--RCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSI 504
Query: 135 LDVRKFKPIHRRKFGY--EVNEIAWNMTGEM 163
D R + +G+ +N+ ++ G M
Sbjct: 505 WDART-GICEQSLYGHMHSINDAIFDPRGHM 534
Score = 71 (30.1 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 179 DPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
DP G A A + LWD ++L + + P ++F +G +A AS + I +
Sbjct: 529 DPRGHMIASCDACGVTKLWDFRKLLPIVSIDIGPSPGNEVNFDSSGRVLAQASGNGVIHL 588
Query: 239 SNVHTGRTVHQI 250
++ +G +H++
Sbjct: 589 LDLKSGE-IHKL 599
Score = 56 (24.8 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 15/58 (25%), Positives = 24/58 (41%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
+ D GR A S + ++ L D+ + E T+ FSH G+ + S D
Sbjct: 568 VNFDSSGRVLAQASGNGVIHLLDLKSGE-IHKLMGHENEAHTVVFSHDGEILFSGGSD 624
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 201 (75.8 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 71/261 (27%), Positives = 113/261 (43%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + ++ WN G + S VD+T +W + H G+ K + H+ + W ++
Sbjct: 328 HKGPIFALKWNRKGNYILSAGVDKTTIIW--DAHT-GEAKQ-QFPFHSAPALDVDW--QN 381
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAE-LSGEN--IN-ITYKPDGTHIAVGNRDDELTI 134
A+ S D + + R G C + + G +N I + P G +A + D L I
Sbjct: 382 NTTFASCSTDMCIHV--CRLG-CDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKI 438
Query: 135 LDVRKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSL 193
+++ IH + E+ I W+ TG T N + A S DS
Sbjct: 439 WSMKQEVCIHDLQAHNKEIYTIKWSPTGP----ATSNPNSNIM--------LASASFDST 486
Query: 194 VSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCR 253
V LWDI +C T TK + PV +++FS G Y+AS S D + I N +G VH
Sbjct: 487 VRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYRGT 546
Query: 254 AAMNSVEWNPKYNLLAYAGDD 274
+ V WN + + + + D
Sbjct: 547 GGIFEVCWNARGDKVGASASD 567
Score = 134 (52.2 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 64/274 (23%), Positives = 104/274 (37%)
Query: 2 GESSIPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE 61
GE IP + GH+ +V AWN LASGS D TAR+W++ + +G +
Sbjct: 216 GEVEIPSSK--ATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLV 273
Query: 62 LR------GHA----DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN 111
LR GH V L W+ + L+AT S D R+W S + G
Sbjct: 274 LRHCIREGGHDVPSNKDVTSLDWNT-NGTLLATGSYDGFARIWTEDGNLASTLGQHKGPI 332
Query: 112 INITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGN 170
+ + G +I D I D + + F ++ W TT
Sbjct: 333 FALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN------TT-- 384
Query: 171 AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA 230
FA S D + + + V+TF V I + +G +AS
Sbjct: 385 --------------FASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASC 430
Query: 231 SEDLFIDISNVHTGRTVHQIPCR-AAMNSVEWNP 263
S+D+ + I ++ +H + + +++W+P
Sbjct: 431 SDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSP 464
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 36/130 (27%), Positives = 58/130 (44%)
Query: 19 HKKKVHSVAWNCTGTK---------LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H K+++++ W+ TG LAS S D T R+W IE G V L H + V
Sbjct: 453 HNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIE---RG-VCTHTLTKHQEPV 508
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
+ + P +A+ S DK V +W+ +SG +G + + G + D
Sbjct: 509 YSVAFSPD-GKYLASGSFDKCVHIWNTQSGNLVHSYRGTGGIFEVCWNARGDKVGASASD 567
Query: 130 DELTILDVRK 139
+ +LD+RK
Sbjct: 568 GSVCVLDLRK 577
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 200 (75.5 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 69/261 (26%), Positives = 114/261 (43%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + ++ WN G + S VD+T +W + H G+ K + H+ + W ++
Sbjct: 274 HKGPIFALKWNKKGNYILSAGVDKTTIIW--DAHT-GEAKQ-QFPFHSAPALDVDW--QN 327
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAE-LSGEN--IN-ITYKPDGTHIAVGNRDDELTI 134
A+ S D + + R G C + + G +N I + P G +A + D L I
Sbjct: 328 NTTFASCSTDMCIHV--CRLG-CDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKI 384
Query: 135 LDVRKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSL 193
+++ +H + E+ I W+ TG T N + A S DS
Sbjct: 385 WSMKQDTCVHDLQAHSKEIYTIKWSPTGP----GTSNPNSNIM--------LASASFDST 432
Query: 194 VSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCR 253
V LWD+ +C+ T TK + PV +++FS G Y+AS S D + I N +G VH
Sbjct: 433 VRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGTLVHSYRGT 492
Query: 254 AAMNSVEWNPKYNLLAYAGDD 274
+ V WN + + + + D
Sbjct: 493 GGIFEVCWNARGDKVGASASD 513
Score = 174 (66.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 45/172 (26%), Positives = 82/172 (47%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+ + GH +V+++ W+ +G LAS S D T ++W ++ V D L+ H+ + +
Sbjct: 352 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTC--VHD--LQAHSKEIYTIK 407
Query: 74 WDPKHAD--------LIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIA 124
W P ++A+AS D TVRLWD G C E + ++ + PDG ++A
Sbjct: 408 WSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLA 467
Query: 125 VGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCI 176
G+ D + I + + +H + + E+ WN G+ + + G C+
Sbjct: 468 SGSFDKCVHIWNTQSGTLVHSYRGTGGIFEVCWNARGDKVGASASD-GSVCV 518
Score = 143 (55.4 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 52/215 (24%), Positives = 84/215 (39%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGT 121
LRGH V W+P +DL+A+ SGD T R+W+ S +L + I +G
Sbjct: 174 LRGHESEVFICAWNPV-SDLLASGSGDSTARIWNLNENSNSGSTQLVLRHC-IR---EGG 228
Query: 122 HIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAG-CYCIAIDP 180
H N+D +T LD + Y+ W G + + G + + +
Sbjct: 229 HDVPSNKD--VTSLDWNSDGTLLATG-SYDGFARIWTEDGNLASTLGQHKGPIFALKWNK 285
Query: 181 MGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISN 240
G Y D +WD + F P + + + + AS S D+ I +
Sbjct: 286 KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCR 344
Query: 241 VHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDD 274
+ R V +N+++W+P LLA DD
Sbjct: 345 LGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 379
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 60/258 (23%), Positives = 98/258 (37%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR------GHA----D 67
GH+ +V AWN LASGS D TAR+W++ + + + LR GH
Sbjct: 176 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVPSNK 235
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN 127
V L W+ L+AT S D R+W S + G + + G +I
Sbjct: 236 DVTSLDWN-SDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAG 294
Query: 128 RDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFA 186
D I D + + F ++ W TT FA
Sbjct: 295 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN------TT----------------FA 332
Query: 187 VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
S D + + + V+TF V I + +G +AS S+D+ + I ++
Sbjct: 333 SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTC 392
Query: 247 VHQIPCRAA-MNSVEWNP 263
VH + + + +++W+P
Sbjct: 393 VHDLQAHSKEIYTIKWSP 410
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 34/130 (26%), Positives = 58/130 (44%)
Query: 19 HKKKVHSVAWNCTGT---------KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H K+++++ W+ TG LAS S D T R+W ++ G V L H + V
Sbjct: 399 HSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVD---RG-VCIHTLTKHQEPV 454
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
+ + P +A+ S DK V +W+ +SG +G + + G + D
Sbjct: 455 YSVAFSPD-GKYLASGSFDKCVHIWNTQSGTLVHSYRGTGGIFEVCWNARGDKVGASASD 513
Query: 130 DELTILDVRK 139
+ +LD+RK
Sbjct: 514 GSVCVLDLRK 523
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 200 (75.5 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 69/261 (26%), Positives = 114/261 (43%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + ++ WN G + S VD+T +W + H G+ K + H+ + W ++
Sbjct: 279 HKGPIFALKWNKKGNYILSAGVDKTTIIW--DAHT-GEAKQ-QFPFHSAPALDVDW--QN 332
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAE-LSGEN--IN-ITYKPDGTHIAVGNRDDELTI 134
A+ S D + + R G C + + G +N I + P G +A + D L I
Sbjct: 333 NTTFASCSTDMCIHV--CRLG-CDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKI 389
Query: 135 LDVRKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSL 193
+++ +H + E+ I W+ TG T N + A S DS
Sbjct: 390 WSMKQDTCVHDLQAHSKEIYTIKWSPTGP----ATSNPNSSIM--------LASASFDST 437
Query: 194 VSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCR 253
V LWD+ +C+ T TK + PV +++FS G Y+AS S D + I N +G VH
Sbjct: 438 VRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGT 497
Query: 254 AAMNSVEWNPKYNLLAYAGDD 274
+ V WN + + + + D
Sbjct: 498 GGIFEVCWNARGDKVGASASD 518
Score = 180 (68.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 45/172 (26%), Positives = 84/172 (48%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+ + GH +V+++ W+ +G LAS S D T ++W ++ V D L+ H+ + +
Sbjct: 357 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTC--VHD--LQAHSKEIYTIK 412
Query: 74 W--------DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIA 124
W +P + ++A+AS D TVRLWD G C E + ++ + PDG ++A
Sbjct: 413 WSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLA 472
Query: 125 VGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCI 176
G+ D + I + + +H + + E+ WN G+ + + G C+
Sbjct: 473 SGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASD-GSVCV 523
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 51/215 (23%), Positives = 83/215 (38%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGT 121
LRGH V W+P +DL+A+ SGD T R+W+ +L + I +G
Sbjct: 179 LRGHESEVFICAWNPV-SDLLASGSGDSTARIWNLNENSNGGSTQLVLRHC-IR---EGG 233
Query: 122 HIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAG-CYCIAIDP 180
H N+D +T LD + Y+ W G + + G + + +
Sbjct: 234 HDVPSNKD--VTSLDWNSDGTLLATG-SYDGFARIWTEDGNLASTLGQHKGPIFALKWNK 290
Query: 181 MGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISN 240
G Y D +WD + F P + + + + AS S D+ I +
Sbjct: 291 KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCR 349
Query: 241 VHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDD 274
+ R V +N+++W+P LLA DD
Sbjct: 350 LGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 384
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 61/258 (23%), Positives = 99/258 (38%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR------GHA----D 67
GH+ +V AWN LASGS D TAR+W++ + +G + LR GH
Sbjct: 181 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 240
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN 127
V L W+ L+AT S D R+W S + G + + G +I
Sbjct: 241 DVTSLDWN-SDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAG 299
Query: 128 RDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFA 186
D I D + + F ++ W TT FA
Sbjct: 300 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN------TT----------------FA 337
Query: 187 VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
S D + + + V+TF V I + +G +AS S+D+ + I ++
Sbjct: 338 SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTC 397
Query: 247 VHQIPCRAA-MNSVEWNP 263
VH + + + +++W+P
Sbjct: 398 VHDLQAHSKEIYTIKWSP 415
Score = 123 (48.4 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 34/130 (26%), Positives = 57/130 (43%)
Query: 19 HKKKVHSVAWNCTGTK---------LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H K+++++ W+ TG LAS S D T R+W +E G L H + V
Sbjct: 404 HSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVE---RGVCLHT-LTKHQEPV 459
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
+ + P +A+ S DK V +W+ +SG +G + + G + D
Sbjct: 460 YSVAFSPD-GKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASD 518
Query: 130 DELTILDVRK 139
+ +LD+RK
Sbjct: 519 GSVCVLDLRK 528
>MGI|MGI:1923825 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1923825 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV
CTD:80232 ChiTaRS:WDR26 EMBL:AC113084 EMBL:AK075743 EMBL:AK167116
EMBL:AK167017 EMBL:BC020044 EMBL:BC058601 IPI:IPI00226275
RefSeq:NP_663489.4 UniGene:Mm.289082 ProteinModelPortal:Q8C6G8
SMR:Q8C6G8 IntAct:Q8C6G8 STRING:Q8C6G8 PhosphoSite:Q8C6G8
PaxDb:Q8C6G8 PRIDE:Q8C6G8 Ensembl:ENSMUST00000162819 GeneID:226757
KEGG:mmu:226757 InParanoid:Q8C6G8 NextBio:378339 Bgee:Q8C6G8
CleanEx:MM_WDR26 Genevestigator:Q8C6G8
GermOnline:ENSMUSG00000038733 Uniprot:Q8C6G8
Length = 641
Score = 148 (57.2 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 35/116 (30%), Positives = 59/116 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
T H +V ++ GTKLA+GS D T +W ++P H +K ++ L GHA V + W
Sbjct: 332 TEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTH-LLKLLKTLEGHAYGVSYIAWS 390
Query: 76 PKHADLIATASGD-KTVRLWDARSGKCSQQAELSGEN--INITYKPDGTHIAVGNR 128
P + L+A D + LW+ ++G+ + S E+ ++ + PDG G +
Sbjct: 391 PDDSYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 446
Score = 101 (40.6 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 178 IDPMGRYFAVGSADSLVSLWDISEMLCVRTF---TKLEWPVRTISFSHTGDYIASASEDL 234
I GR + A V LWD+ + + VR + T+ + + + H D+IAS SED
Sbjct: 514 ISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDH 573
Query: 235 FIDISNVHTGRTVHQIPCRA-AMNSVEWNPKY-NLLAYAGDD 274
+ I + + + ++ +N V WNP+ +++A A DD
Sbjct: 574 KVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDD 615
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 149 (57.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 34/89 (38%), Positives = 48/89 (53%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
TGHK+ V V+W G +LASG + +W E G+ K L GH ++ L W+P
Sbjct: 158 TGHKQWVLCVSWAPDGKRLASGCKAGSIIIWDPET---GQQKGRPLSGHKKHINCLAWEP 214
Query: 77 KHAD----LIATASGDKTVRLWDARSGKC 101
H D +A+ASGD R+WD + G+C
Sbjct: 215 YHRDPECRKLASASGDGDCRIWDVKLGQC 243
Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 35/116 (30%), Positives = 59/116 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
TGH+ V+ V ++ +AS S D++ R+W G+ RGH +V + W
Sbjct: 372 TGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASD---GQYM-ATFRGHVQAVYTVAWSA 427
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSG---ENINITYKPDGTHIAVGNRD 129
+ LI + S D T+++W ++ K +Q EL G E + + PDG+ +A G +D
Sbjct: 428 D-SRLIVSGSKDSTLKVWSVQTKKLAQ--ELPGHADEVFGVDWAPDGSRVASGGKD 480
Score = 132 (51.5 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75
+ GH + V++VAW+ + SGS D T +VW ++ K+ EL GHAD V + W
Sbjct: 413 FRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTK---KLAQ-ELPGHADEVFGVDWA 468
Query: 76 PKHADLIATASGDKTVRLW 94
P +A+ DK ++LW
Sbjct: 469 PD-GSRVASGGKDKVIKLW 486
Score = 115 (45.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 32/93 (34%), Positives = 49/93 (52%)
Query: 14 REYTGHKKKVHSVAWN-------CTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHA 66
R +GHKK ++ +AW C KLAS S D R+W ++ G+ + + GH
Sbjct: 198 RPLSGHKKHINCLAWEPYHRDPECR--KLASASGDGDCRIWDVKL---GQCL-MNIAGHT 251
Query: 67 DSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99
++V + W A LI T+S D+TV++W A G
Sbjct: 252 NAVTAVRWGG--AGLIYTSSKDRTVKMWRAADG 282
Score = 96 (38.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 28/101 (27%), Positives = 46/101 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+ P + A S D V LW S+ + TF V T+++S I S S+D
Sbjct: 381 VKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDST 440
Query: 236 IDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDK 275
+ + +V T + ++P A + V+W P + +A G DK
Sbjct: 441 LKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVASGGKDK 481
Score = 95 (38.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 38/131 (29%), Positives = 62/131 (47%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH + V S+ ++ G LASGS D T R+W + + GH V + W P
Sbjct: 117 GHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNT----ETPHFTCTGHKQWVLCVSWAPD 172
Query: 78 HADLIATASGDK--TVRLWDARSGKCSQQAELSG--ENIN-ITYKP-----DGTHIAVGN 127
L ASG K ++ +WD +G+ + LSG ++IN + ++P + +A +
Sbjct: 173 GKRL---ASGCKAGSIIIWDPETGQ-QKGRPLSGHKKHINCLAWEPYHRDPECRKLASAS 228
Query: 128 RDDELTILDVR 138
D + I DV+
Sbjct: 229 GDGDCRIWDVK 239
Score = 59 (25.8 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 21/87 (24%), Positives = 36/87 (41%)
Query: 189 SADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVH 248
S D+ + LW ++ CV T + V + +S IASAS D + + G+ +
Sbjct: 352 SDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMA 411
Query: 249 QIPCRA-AMNSVEWNPKYNLLAYAGDD 274
A+ +V W+ L+ D
Sbjct: 412 TFRGHVQAVYTVAWSADSRLIVSGSKD 438
Score = 52 (23.4 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 17/84 (20%), Positives = 31/84 (36%)
Query: 157 WNMTGEMFFLT-TGNA-GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W + + T G+ Y +A R GS DS + +W + +
Sbjct: 402 WRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADE 461
Query: 215 VRTISFSHTGDYIASASEDLFIDI 238
V + ++ G +AS +D I +
Sbjct: 462 VFGVDWAPDGSRVASGGKDKVIKL 485
Score = 45 (20.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 14/62 (22%), Positives = 32/62 (51%)
Query: 227 IASASEDLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKNK--YQADEG 283
+ S S+D + + + + V ++ +N V+++P L+A A DK+ ++A +G
Sbjct: 348 LVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDG 407
Query: 284 VF 285
+
Sbjct: 408 QY 409
Score = 38 (18.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 180 PMGRYFAVGSADSLVSLW 197
P G A G D ++ LW
Sbjct: 469 PDGSRVASGGKDKVIKLW 486
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 196 (74.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 71/271 (26%), Positives = 125/271 (46%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V + +N G+ L S S D+T VW E G +VK L+GH V+ C+ +
Sbjct: 134 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET-GE-RVK--RLKGHTSFVNS-CYPAR 188
Query: 78 HA-DLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILD 136
L+ T S D TV+LWD R Q + + + + +T+ I G D+++ + D
Sbjct: 189 RGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 248
Query: 137 VRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCI--AIDPMGRYFAV---GSAD 191
+R+ K Y + A ++TG L+ + G Y + A+D R + V +
Sbjct: 249 LRQ------NKLTYTMRGHADSVTG----LSLSSEGSYLLSNAMDNTVRIWDVRPFAPKE 298
Query: 192 SLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP 251
V ++ + V F K + S+S G IA S D F+ + + + R ++++P
Sbjct: 299 RCVKIFQGN----VHNFEK---NLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLP 351
Query: 252 CRA-AMNSVEWNPKYNLLAYAGDDKNKYQAD 281
A ++N + ++P+ ++ A DK Y +
Sbjct: 352 GHAGSVNELAFHPEEPIILSASSDKRLYMGE 382
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/149 (24%), Positives = 76/149 (51%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
+GH+ +V+ ++ G LAS D+ +W++ +G + L+GH+ +V +L ++
Sbjct: 90 SGHEGEVYCCKFHPWGNTLASAGFDRLILLWNV----YGDCDNYATLKGHSGAVMELHYN 145
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPD-GTH-IAVGNRDDELT 133
++ +AS DKTV +WD+ +G+ ++ + +N Y G + G+ D +
Sbjct: 146 TD-GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 204
Query: 134 ILDVRKFKPIHRRKFGYEVNEIAWNMTGE 162
+ D+RK + + Y+V + +N T +
Sbjct: 205 LWDIRKKAAVQTFQNTYQVLAVTFNDTSD 233
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 163 (62.4 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 42/151 (27%), Positives = 76/151 (50%)
Query: 9 KNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADS 68
K + +R + GH + V SVA++ ++ SGS D T +VW+ G K H D
Sbjct: 101 KGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTL--GECKFTLEGPEAHQDW 158
Query: 69 VDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGN 127
V + + P + I + S D V++WD +S KC+ + +G +T PDG+ A G
Sbjct: 159 VSCIRFSP-NTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGG 217
Query: 128 RDDELTILDVRKFKPIHRRKFGYEVNEIAWN 158
+D + ++ KP+++ + +N +A++
Sbjct: 218 KDTFACLWELSSGKPLYKLEARNTINALAFS 248
Score = 144 (55.7 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 36/123 (29%), Positives = 55/123 (44%)
Query: 157 WNMTGEMFFLTTGNAG----CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE 212
WN GE F G CI P GS D+ V +WDI C T T
Sbjct: 139 WNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHT 198
Query: 213 WPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAG 272
V T++ S G AS +D F + + +G+ ++++ R +N++ ++P L+ A
Sbjct: 199 GYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTINALAFSPNKYWLSAAT 258
Query: 273 DDK 275
DDK
Sbjct: 259 DDK 261
Score = 116 (45.9 bits), Expect = 0.00026, P = 0.00026
Identities = 42/156 (26%), Positives = 70/156 (44%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V V + G SGS D T R+W I G V +GH V +
Sbjct: 64 RSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITK-G---VSTRLFKGHTQDVMSVA 119
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCS---QQAELSGENIN-ITYKPDGTHIAVGNRD 129
+ + +I+ S D T+++W+ G+C + E + ++ I + P+ I G+ D
Sbjct: 120 FSSDNRQIIS-GSRDATIKVWNTL-GECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWD 177
Query: 130 DELTILDVRKFKPIHRRK--FGYEVNEIAWNMTGEM 163
+++ I D++ FK H GY VN + + G +
Sbjct: 178 NKVKIWDIKSFKCNHTLTDHTGY-VNTVTISPDGSL 212
Score = 95 (38.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 18 GHKKKVHSVAWNCTGTK-LASGSVDQTARVWHIEPH---GHGKVKDIELRGHADSVDQLC 73
GH V S+A + + S S D+T VW + P GK L+GH+ V +
Sbjct: 19 GHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHR-SLKGHSHFVQDVV 77
Query: 74 WDPKHADLIA-TASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDE 131
H A + S D T+RLWD G ++ + +++ ++ + D I G+RD
Sbjct: 78 IS--HDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDAT 135
Query: 132 LTI 134
+ +
Sbjct: 136 IKV 138
>UNIPROTKB|Q2TBM8 [details] [associations]
symbol:WDR26 "WD repeat domain 26" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOGENOM:HOG000160946 HOVERGEN:HBG083958 OMA:IRGQFYQ
OrthoDB:EOG4GHZNV CTD:80232 EMBL:DAAA02042638 EMBL:BC109897
IPI:IPI00702354 RefSeq:NP_001070527.1 UniGene:Bt.21955
Ensembl:ENSBTAT00000034200 GeneID:767999 KEGG:bta:767999
InParanoid:Q2TBM8 NextBio:20918354 Uniprot:Q2TBM8
Length = 514
Score = 145 (56.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 35/116 (30%), Positives = 58/116 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
T H +V ++ GTKLA+GS D T +W ++P H +K ++ L GHA V + W
Sbjct: 205 TEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTH-LLKLLKTLEGHAYGVSYIAWS 263
Query: 76 PKHADLIATASGD-KTVRLWDARSGKCSQQAELSGEN--INITYKPDGTHIAVGNR 128
P L+A D + LW+ ++G+ + S E+ ++ + PDG G +
Sbjct: 264 PDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 319
Score = 101 (40.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 178 IDPMGRYFAVGSADSLVSLWDISEMLCVRTF---TKLEWPVRTISFSHTGDYIASASEDL 234
I GR + A V LWD+ + + VR + T+ + + + H D+IAS SED
Sbjct: 387 ISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDH 446
Query: 235 FIDISNVHTGRTVHQIPCRA-AMNSVEWNPKY-NLLAYAGDD 274
+ I + + + ++ +N V WNP+ +++A A DD
Sbjct: 447 KVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDD 488
>UNIPROTKB|F1PIR1 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:AAEX03005292
RefSeq:XP_003434930.1 ProteinModelPortal:F1PIR1
Ensembl:ENSCAFT00000025923 GeneID:480115 KEGG:cfa:480115
Uniprot:F1PIR1
Length = 514
Score = 145 (56.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 35/116 (30%), Positives = 58/116 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
T H +V ++ GTKLA+GS D T +W ++P H +K ++ L GHA V + W
Sbjct: 205 TEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTH-LLKLLKTLEGHAYGVSYIAWS 263
Query: 76 PKHADLIATASGD-KTVRLWDARSGKCSQQAELSGEN--INITYKPDGTHIAVGNR 128
P L+A D + LW+ ++G+ + S E+ ++ + PDG G +
Sbjct: 264 PDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 319
Score = 101 (40.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 178 IDPMGRYFAVGSADSLVSLWDISEMLCVRTF---TKLEWPVRTISFSHTGDYIASASEDL 234
I GR + A V LWD+ + + VR + T+ + + + H D+IAS SED
Sbjct: 387 ISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDH 446
Query: 235 FIDISNVHTGRTVHQIPCRA-AMNSVEWNPKY-NLLAYAGDD 274
+ I + + + ++ +N V WNP+ +++A A DD
Sbjct: 447 KVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDD 488
>UNIPROTKB|F1P3E7 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ EMBL:AADN02012163 EMBL:AADN02012164
EMBL:AADN02012165 IPI:IPI00585040 Ensembl:ENSGALT00000015154
Uniprot:F1P3E7
Length = 684
Score = 148 (57.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 35/116 (30%), Positives = 59/116 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
T H +V ++ GTKLA+GS D T +W ++P H ++K ++ L GHA V + W
Sbjct: 375 TEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTH-QLKLLKTLEGHAYGVSYIAWS 433
Query: 76 PKHADLIATASGD-KTVRLWDARSGKCSQQAELSGEN--INITYKPDGTHIAVGNR 128
P L+A D + LW+ ++G+ + S E+ ++ + PDG G +
Sbjct: 434 PDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 489
Score = 101 (40.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 178 IDPMGRYFAVGSADSLVSLWDISEMLCVRTF---TKLEWPVRTISFSHTGDYIASASEDL 234
I GR + A V LWD+ + + VR + T+ + + + H D+IAS SED
Sbjct: 557 ISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDH 616
Query: 235 FIDISNVHTGRTVHQIPCRA-AMNSVEWNPKY-NLLAYAGDD 274
+ I + + + ++ +N V WNP+ +++A A DD
Sbjct: 617 KVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDD 658
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 198 (74.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 69/261 (26%), Positives = 114/261 (43%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + ++ WN G + S VD+T +W + H G+ K + H+ + W ++
Sbjct: 271 HKGPIFALKWNKKGNYILSAGVDKTTIIW--DAHT-GEAKQ-QFPFHSAPALDVDW--QN 324
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAE-LSGEN--IN-ITYKPDGTHIAVGNRDDELTI 134
A+ S D + + R G C + + G +N I + P G +A + D L I
Sbjct: 325 NTTFASCSTDMCIHV--CRLG-CDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKI 381
Query: 135 LDVRKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSL 193
+++ +H + E+ I W+ TG TT N + A S DS
Sbjct: 382 WSMKQDACVHNLQAHRKEIYTIKWSPTGP----TTSNPNSSIM--------LASASFDST 429
Query: 194 VSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCR 253
V LWD+ + +C T K + PV +++FS G Y+AS S D + I N +G VH
Sbjct: 430 VRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQGT 489
Query: 254 AAMNSVEWNPKYNLLAYAGDD 274
+ V WN + + + + D
Sbjct: 490 GGIFEVCWNAQGDKVGASASD 510
Score = 178 (67.7 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 44/172 (25%), Positives = 84/172 (48%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+ + GH +V+++ W+ +G LAS S D T ++W ++ V + L+ H + +
Sbjct: 349 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDAC--VHN--LQAHRKEIYTIK 404
Query: 74 W--------DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIA 124
W +P + ++A+AS D TVRLWD G C+ E + ++ + PDG ++A
Sbjct: 405 WSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLA 464
Query: 125 VGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCI 176
G+ D + I + + +H + + E+ WN G+ + + G C+
Sbjct: 465 SGSFDKCVHIWNTQSGSLVHSYQGTGGIFEVCWNAQGDKVGASASD-GSVCV 515
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 51/215 (23%), Positives = 83/215 (38%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGT 121
LRGH V W+P +DL+A+ SGD T R+W+ +L + I +G
Sbjct: 171 LRGHESEVFICAWNPV-SDLLASGSGDSTARIWNLNENGSRASTQLVLRHC-IR---EGG 225
Query: 122 HIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAG-CYCIAIDP 180
H N+D +T LD + Y+ W G + + G + + +
Sbjct: 226 HDVPSNKD--VTSLDWNSDGTLLATG-SYDGFARIWTENGNLASTLGQHKGPIFALKWNK 282
Query: 181 MGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISN 240
G Y D +WD + F P + + + + AS S D+ I +
Sbjct: 283 KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCR 341
Query: 241 VHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDD 274
+ R V +N+++W+P LLA DD
Sbjct: 342 LGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 376
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 62/258 (24%), Positives = 98/258 (37%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR------GHA----D 67
GH+ +V AWN LASGS D TAR+W++ +G + LR GH
Sbjct: 173 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIREGGHDVPSNK 232
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN 127
V L W+ L+AT S D R+W S + G + + G +I
Sbjct: 233 DVTSLDWN-SDGTLLATGSYDGFARIWTENGNLASTLGQHKGPIFALKWNKKGNYILSAG 291
Query: 128 RDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFA 186
D I D + + F ++ W TT FA
Sbjct: 292 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN------TT----------------FA 329
Query: 187 VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
S D + + + V+TF V I + +G +AS S+D+ + I ++
Sbjct: 330 SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDAC 389
Query: 247 VHQIPC-RAAMNSVEWNP 263
VH + R + +++W+P
Sbjct: 390 VHNLQAHRKEIYTIKWSP 407
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 36/130 (27%), Positives = 61/130 (46%)
Query: 19 HKKKVHSVAWNCTGTK---------LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H+K+++++ W+ TG LAS S D T R+W +E G V LR H + V
Sbjct: 396 HRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDME---QG-VCTHTLRKHQEPV 451
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
+ + P +A+ S DK V +W+ +SG + +G + + G + D
Sbjct: 452 YSVAFSPD-GKYLASGSFDKCVHIWNTQSGSLVHSYQGTGGIFEVCWNAQGDKVGASASD 510
Query: 130 DELTILDVRK 139
+ +LD+RK
Sbjct: 511 GSVCVLDLRK 520
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 198 (74.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 71/261 (27%), Positives = 111/261 (42%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + ++ WN G + S VD+T +W + H G+ K + H+ + W
Sbjct: 320 HKGPIFALKWNRKGNYILSAGVDKTTIIW--DAHT-GEAKQ-QFPFHSAPALDVDWQNNM 375
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAE-LSGEN--IN-ITYKPDGTHIAVGNRDDELTI 134
A+ S D + + R G C + + G +N I + P G +A + D L I
Sbjct: 376 T--FASCSTDMCIHV--CRLG-CDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKI 430
Query: 135 LDVRKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSL 193
+++ IH + E+ I W+ TG T N + A S DS
Sbjct: 431 WSMKQEVCIHDLQAHNKEIYTIKWSPTGP----ATSNPNSNIM--------LASASFDST 478
Query: 194 VSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCR 253
V LWDI +C T TK + PV +++FS G Y+AS S D + I N +G VH
Sbjct: 479 VRLWDIERGVCTHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQSGNLVHSYRGT 538
Query: 254 AAMNSVEWNPKYNLLAYAGDD 274
+ V WN + + + + D
Sbjct: 539 GGIFEVCWNARGDKVGASASD 559
Score = 136 (52.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 64/274 (23%), Positives = 104/274 (37%)
Query: 2 GESSIPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE 61
GE IP + GH+ +V AWN LASGS D TAR+W++ + +G +
Sbjct: 208 GEVDIPSSK--ATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLV 265
Query: 62 LR------GHA----DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN 111
LR GH V L W+ + L+AT S D R+W S + G
Sbjct: 266 LRHCIREGGHDVPSNKDVTSLDWNT-NGTLLATGSYDGFARIWTEDGNLASTLGQHKGPI 324
Query: 112 INITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGN 170
+ + G +I D I D + + F ++ W M F
Sbjct: 325 FALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ--NNMTF----- 377
Query: 171 AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA 230
A C S D + + + V+TF V I + +G +AS
Sbjct: 378 ASC---------------STDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASC 422
Query: 231 SEDLFIDISNVHTGRTVHQIPCR-AAMNSVEWNP 263
S+D+ + I ++ +H + + +++W+P
Sbjct: 423 SDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSP 456
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 36/130 (27%), Positives = 58/130 (44%)
Query: 19 HKKKVHSVAWNCTGTK---------LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H K+++++ W+ TG LAS S D T R+W IE G V L H + V
Sbjct: 445 HNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIE---RG-VCTHTLTKHQEPV 500
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
+ + P +A+ S DK V +W+ +SG +G + + G + D
Sbjct: 501 YSVAFSPD-GRYLASGSFDKCVHIWNTQSGNLVHSYRGTGGIFEVCWNARGDKVGASASD 559
Query: 130 DELTILDVRK 139
+ +LD+RK
Sbjct: 560 GSVCVLDLRK 569
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 197 (74.4 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 68/261 (26%), Positives = 111/261 (42%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + ++ WN G + S VD+T +W + H G+ K + H+ + W
Sbjct: 275 HKGPIFALKWNKKGNYVLSAGVDKTTIIW--DAHT-GEAKQ-QFPFHSAPALDVDWQNNM 330
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAE-LSGEN--IN-ITYKPDGTHIAVGNRDDELTI 134
A+ S D + + R G C + G +N I + P G +A + D L I
Sbjct: 331 T--FASCSTDMCIHV--CRLG-CDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKI 385
Query: 135 LDVRKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSL 193
+++ +H + E+ I W+ TG T N + A S DS
Sbjct: 386 WSMKQDACVHDLQAHSKEIYTIKWSPTGP----ATSNPNSSIM--------LASASFDST 433
Query: 194 VSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCR 253
V LWD+ + +C T K + PV +++FS G Y+AS S D ++ I N +G VH
Sbjct: 434 VRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQGT 493
Query: 254 AAMNSVEWNPKYNLLAYAGDD 274
+ V WN + + + + D
Sbjct: 494 GGIFEVCWNARGDKVGASASD 514
Score = 186 (70.5 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 45/172 (26%), Positives = 85/172 (49%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+ + GH +V+++ W+ +G LAS S D T ++W ++ V D L+ H+ + +
Sbjct: 353 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDAC--VHD--LQAHSKEIYTIK 408
Query: 74 W--------DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIA 124
W +P + ++A+AS D TVRLWD G C+ E + ++ + PDG ++A
Sbjct: 409 WSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLA 468
Query: 125 VGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCI 176
G+ D + I + + +H + + E+ WN G+ + + G C+
Sbjct: 469 SGSFDKYVHIWNTQSGSLVHSYQGTGGIFEVCWNARGDKVGASASD-GSVCV 519
Score = 133 (51.9 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 50/215 (23%), Positives = 82/215 (38%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGT 121
LRGH V W+P +DL+A+ SGD T R+W+ +L + I +G
Sbjct: 175 LRGHESEVFICAWNPV-SDLLASGSGDSTARIWNLNENSNGGSTQLVLRHC-IR---EGG 229
Query: 122 HIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAG-CYCIAIDP 180
H N+D +T LD + Y+ W G + + G + + +
Sbjct: 230 HDVPSNKD--VTSLDWNSDGTLLAMG-SYDGFARIWTENGNLASTLGQHKGPIFALKWNK 286
Query: 181 MGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISN 240
G Y D +WD + F P + + + + AS S D+ I +
Sbjct: 287 KGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTF-ASCSTDMCIHVCR 345
Query: 241 VHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDD 274
+ V +N+++W+P LLA DD
Sbjct: 346 LGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 380
Score = 133 (51.9 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 59/258 (22%), Positives = 98/258 (37%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR------GHA----D 67
GH+ +V AWN LASGS D TAR+W++ + +G + LR GH
Sbjct: 177 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 236
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN 127
V L W+ L+A S D R+W S + G + + G ++
Sbjct: 237 DVTSLDWN-SDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKWNKKGNYVLSAG 295
Query: 128 RDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFA 186
D I D + + F ++ W M F A C
Sbjct: 296 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ--NNMTF-----ASC------------- 335
Query: 187 VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
S D + + + V+TF V I + +G +AS S+D+ + I ++
Sbjct: 336 --STDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDAC 393
Query: 247 VHQIPCRAA-MNSVEWNP 263
VH + + + +++W+P
Sbjct: 394 VHDLQAHSKEIYTIKWSP 411
Score = 117 (46.2 bits), Expect = 0.00043, P = 0.00043
Identities = 33/128 (25%), Positives = 57/128 (44%)
Query: 19 HKKKVHSVAWNCTGTK---------LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H K+++++ W+ TG LAS S D T R+W +E G V L H + V
Sbjct: 400 HSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVE---QG-VCTHTLMKHQEPV 455
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
+ + P +A+ S DK V +W+ +SG + +G + + G + D
Sbjct: 456 YSVAFSPD-GKYLASGSFDKYVHIWNTQSGSLVHSYQGTGGIFEVCWNARGDKVGASASD 514
Query: 130 DELTILDV 137
+ +LD+
Sbjct: 515 GSVCVLDL 522
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 193 (73.0 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 61/225 (27%), Positives = 105/225 (46%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V ++++ +G LAS S D T ++W + G ++ + GH +V +
Sbjct: 79 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--MHGHDHNVSSVA 134
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKP--DGTHIAVGNRDDE 131
P + D I +AS DKT+++W+ ++G C + E + + +P DGT IA + D
Sbjct: 135 IMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQT 192
Query: 132 LTILDVR-KFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNA-GCYCIAIDPMGRYFAVGS 189
+ + V K R+ + V I+W E + + A G G + GS
Sbjct: 193 VRVWVVATKECKAELREHEHVVECISW--APESSYSSISEATGSETKKSGKPGPFLLSGS 250
Query: 190 ADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASED 233
D + +WD+S +C+ T + W VR + F G +I S ++D
Sbjct: 251 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 294
Score = 153 (58.9 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 61/232 (26%), Positives = 106/232 (45%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V SVA G + S S D+T ++W ++ G+ VK GH + V ++
Sbjct: 121 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT-GYC-VKTFT--GHREWV-RMV 175
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENIN--ITYKPDGTHIAVGNRDD 130
+ LIA+ S D+TVR+W + +C +AEL E++ I++ P+ ++ ++
Sbjct: 176 RPNQDGTLIASCSNDQTVRVWVVATKEC--KAELREHEHVVECISWAPESSYSSIS---- 229
Query: 131 ELTILDVRKF-KPIHRRKFGYEVNEIA-WNMTGEMFFLT-TGNAGCYCIAIDPMGRYFAV 187
E T + +K KP G I W+++ M +T G+ + G F +
Sbjct: 230 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 289
Query: 188 GSADS-LVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
AD + +WD C++T E V ++ F T Y+ + S D + +
Sbjct: 290 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 341
Score = 152 (58.6 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH+ V V ++ + + S S D T +VW E + L+GH DSV + +D
Sbjct: 40 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT----LKGHTDSVQDISFDH 95
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
L+A+ S D T++LWD + +C + N++ + P+G HI +RD + +
Sbjct: 96 S-GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 154
Query: 136 DVR 138
+V+
Sbjct: 155 EVQ 157
Score = 115 (45.5 bits), Expect = 0.00037, P = 0.00037
Identities = 32/101 (31%), Positives = 46/101 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
I+ D G+ A SAD + LWD C+RT + V +++ GD+I SAS D
Sbjct: 91 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 150
Query: 236 IDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 275
I + V TG V R + V N L+A +D+
Sbjct: 151 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 191
Score = 115 (45.5 bits), Expect = 0.00037, P = 0.00037
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRTISFSHTGDYIASASEDL 234
+AI P G + S D + +W++ CV+TFT EW VR + + G IAS S D
Sbjct: 133 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQ 191
Query: 235 FIDISNVHTGRTVHQI-PCRAAMNSVEWNPK--YNLLAYAGDDKNKYQADEGVFRIYG 289
+ + V T ++ + + W P+ Y+ ++ A + K G F + G
Sbjct: 192 TVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 249
Score = 39 (18.8 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 184 YFAVGSADSLVSLWD 198
Y GS D V +W+
Sbjct: 329 YVVTGSVDQTVKVWE 343
>UNIPROTKB|F1S8S6 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:CU927957
RefSeq:XP_003357688.1 UniGene:Ssc.21945 Ensembl:ENSSSCT00000011871
GeneID:100523327 KEGG:ssc:100523327 Uniprot:F1S8S6
Length = 660
Score = 145 (56.1 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 35/116 (30%), Positives = 58/116 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
T H +V ++ GTKLA+GS D T +W ++P H +K ++ L GHA V + W
Sbjct: 351 TEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTH-LLKLLKTLEGHAYGVSYIAWS 409
Query: 76 PKHADLIATASGD-KTVRLWDARSGKCSQQAELSGEN--INITYKPDGTHIAVGNR 128
P L+A D + LW+ ++G+ + S E+ ++ + PDG G +
Sbjct: 410 PDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 465
Score = 101 (40.6 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 178 IDPMGRYFAVGSADSLVSLWDISEMLCVRTF---TKLEWPVRTISFSHTGDYIASASEDL 234
I GR + A V LWD+ + + VR + T+ + + + H D+IAS SED
Sbjct: 533 ISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDH 592
Query: 235 FIDISNVHTGRTVHQIPCRA-AMNSVEWNPKY-NLLAYAGDD 274
+ I + + + ++ +N V WNP+ +++A A DD
Sbjct: 593 KVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDD 634
>UNIPROTKB|Q9H7D7 [details] [associations]
symbol:WDR26 "WD repeat-containing protein 26" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV EMBL:AB209887
EMBL:AC099790 EMBL:BC031471 EMBL:BC034498 EMBL:BC052301
EMBL:BC063817 EMBL:AY221751 EMBL:AY304473 EMBL:AF130049
EMBL:EF011612 EMBL:AK024669 IPI:IPI00414197 IPI:IPI00645819
IPI:IPI00646469 IPI:IPI00829602 RefSeq:NP_001108585.2
RefSeq:NP_079436.4 UniGene:Hs.497873 UniGene:Hs.729289
ProteinModelPortal:Q9H7D7 SMR:Q9H7D7 IntAct:Q9H7D7 STRING:Q9H7D7
PhosphoSite:Q9H7D7 DMDM:134047967 PaxDb:Q9H7D7 PRIDE:Q9H7D7
Ensembl:ENST00000295024 Ensembl:ENST00000366852
Ensembl:ENST00000414423 GeneID:80232 KEGG:hsa:80232 UCSC:uc001hop.4
UCSC:uc001hoq.4 UCSC:uc021pjt.1 CTD:80232 GeneCards:GC01M224573
HGNC:HGNC:21208 HPA:HPA028539 neXtProt:NX_Q9H7D7
PharmGKB:PA134907873 InParanoid:Q9H7D7 ChiTaRS:WDR26
GenomeRNAi:80232 NextBio:70673 ArrayExpress:Q9H7D7 Bgee:Q9H7D7
CleanEx:HS_WDR26 Genevestigator:Q9H7D7 GermOnline:ENSG00000162923
Uniprot:Q9H7D7
Length = 661
Score = 145 (56.1 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 35/116 (30%), Positives = 58/116 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
T H +V ++ GTKLA+GS D T +W ++P H +K ++ L GHA V + W
Sbjct: 352 TEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTH-LLKLLKTLEGHAYGVSYIAWS 410
Query: 76 PKHADLIATASGD-KTVRLWDARSGKCSQQAELSGEN--INITYKPDGTHIAVGNR 128
P L+A D + LW+ ++G+ + S E+ ++ + PDG G +
Sbjct: 411 PDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 466
Score = 101 (40.6 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 178 IDPMGRYFAVGSADSLVSLWDISEMLCVRTF---TKLEWPVRTISFSHTGDYIASASEDL 234
I GR + A V LWD+ + + VR + T+ + + + H D+IAS SED
Sbjct: 534 ISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDH 593
Query: 235 FIDISNVHTGRTVHQIPCRA-AMNSVEWNPKY-NLLAYAGDD 274
+ I + + + ++ +N V WNP+ +++A A DD
Sbjct: 594 KVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDD 635
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 196 (74.1 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 69/261 (26%), Positives = 112/261 (42%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + ++ WN G + S VD+T +W + H G+ K + H+ + W ++
Sbjct: 275 HKGPIFALKWNKKGNYILSAGVDKTTIIW--DAHT-GEAKQ-QFPFHSAPALDVDW--QN 328
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAE-LSGEN--IN-ITYKPDGTHIAVGNRDDELTI 134
A+ D + + R G C + G +N I + P G +A + D L I
Sbjct: 329 NTTFASCGTDMCIHV--CRLG-CDLPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKI 385
Query: 135 LDVRKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSL 193
+++ +H + E+ I W+ TG T N + A S DS
Sbjct: 386 WSMKQDACVHDLQAHSKEIYTIKWSPTGP----ATSNPNSSIM--------LASASFDST 433
Query: 194 VSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCR 253
V LWD+ + +C T TK + PV +I+FS G Y+AS S D + I N +G VH
Sbjct: 434 VRLWDVEQGVCTHTLTKHQEPVYSIAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQGT 493
Query: 254 AAMNSVEWNPKYNLLAYAGDD 274
+ V WN + + + + D
Sbjct: 494 GGIFEVCWNARGDKVGASASD 514
Score = 187 (70.9 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 47/176 (26%), Positives = 87/176 (49%)
Query: 10 NLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
+L + + GH +V+++ W+ +G LAS S D T ++W ++ V D L+ H+ +
Sbjct: 349 DLPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDAC--VHD--LQAHSKEI 404
Query: 70 DQLCW--------DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDG 120
+ W +P + ++A+AS D TVRLWD G C+ E + +I + PDG
Sbjct: 405 YTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDG 464
Query: 121 THIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCI 176
++A G+ D + I + + +H + + E+ WN G+ + + G C+
Sbjct: 465 KYLASGSFDKCVHIWNTQSGSLVHSYQGTGGIFEVCWNARGDKVGASASD-GSVCV 519
Score = 135 (52.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 61/258 (23%), Positives = 99/258 (38%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-----GHAD----- 67
GH+ +V AWN LASGS D TAR+W++ + +G + LR G D
Sbjct: 177 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGWHDVPSNK 236
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN 127
V L W+ L+A S D R+W S + G + + G +I
Sbjct: 237 DVTSLDWN-SDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKWNKKGNYILSAG 295
Query: 128 RDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFA 186
D I D + + F ++ W F + G CI + +G
Sbjct: 296 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ--NNTTFASCGTD--MCIHVCRLG---- 347
Query: 187 VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
D L V+TF V I + +G +AS S+D+ + I ++
Sbjct: 348 ---CD-----------LPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDAC 393
Query: 247 VHQIPCRAA-MNSVEWNP 263
VH + + + +++W+P
Sbjct: 394 VHDLQAHSKEIYTIKWSP 411
Score = 129 (50.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 35/130 (26%), Positives = 59/130 (45%)
Query: 19 HKKKVHSVAWNCTGTK---------LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H K+++++ W+ TG LAS S D T R+W +E G V L H + V
Sbjct: 400 HSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVE---QG-VCTHTLTKHQEPV 455
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
+ + P +A+ S DK V +W+ +SG + +G + + G + D
Sbjct: 456 YSIAFSPD-GKYLASGSFDKCVHIWNTQSGSLVHSYQGTGGIFEVCWNARGDKVGASASD 514
Query: 130 DELTILDVRK 139
+ +LD+RK
Sbjct: 515 GSVCVLDLRK 524
Score = 129 (50.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 49/215 (22%), Positives = 81/215 (37%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGT 121
LRGH V W+P +DL+A+ SGD T R+W+ +L + I +G
Sbjct: 175 LRGHESEVFICAWNPV-SDLLASGSGDSTARIWNLNENSNGGSTQLVLRHC-IR---EGW 229
Query: 122 HIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAG-CYCIAIDP 180
H N+D +T LD + Y+ W G + + G + + +
Sbjct: 230 HDVPSNKD--VTSLDWNSDGTLLAMG-SYDGFARIWTENGNLASTLGQHKGPIFALKWNK 286
Query: 181 MGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISN 240
G Y D +WD + F P + + + + AS D+ I +
Sbjct: 287 KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCGTDMCIHVCR 345
Query: 241 VHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDD 274
+ V +N+++W+P LLA DD
Sbjct: 346 LGCDLPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 380
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 148 (57.2 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 36/124 (29%), Positives = 67/124 (54%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R TGHK V+ +AW+ + S S D+T +++ I K L+GH + V
Sbjct: 123 RTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKT----LKGHNNYVFCCN 178
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDEL 132
++P+ + L+ + S D++VR+WD ++G C + + ++ +++ DG+ IA G+ D +
Sbjct: 179 FNPQ-SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLV 237
Query: 133 TILD 136
I D
Sbjct: 238 RIWD 241
Score = 145 (56.1 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 44/164 (26%), Positives = 82/164 (50%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-VKDIELRGHADSVDQLCWDP 76
GH V +N + + SGS D++ R+W ++ G +K L H+D V + ++
Sbjct: 169 GHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT---GMCIKT--LPAHSDPVSAVSFN- 222
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITY---KPDGTHIAVGNRDDELT 133
+ LIA+ S D VR+WD +G+C + + EN + + P+G +I N D L
Sbjct: 223 RDGSLIASGSYDGLVRIWDTANGQCIKTL-VDDENPPVAFVKFSPNGKYILASNLDSTLK 281
Query: 134 ILDVRKFKPIHRRKFGYEVNEIA----WNMTGEMFFLTTGNAGC 173
+ D K K + ++ G+E ++ +++TG + ++ G+ C
Sbjct: 282 LWDFSKGKTL-KQYTGHENSKYCIFANFSVTGGKWIIS-GSEDC 323
Score = 125 (49.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 30/124 (24%), Positives = 64/124 (51%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH K + S ++ G L + S D+T ++W+++ H + + L GH V+ + W
Sbjct: 85 GHTKSISSAKFSPCGKYLGTSSADKTVKIWNMD-H---MICERTLTGHKLGVNDIAWS-S 139
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINI---TYKPDGTHIAVGNRDDELTI 134
+ + +AS DKT+++++ + + ++ L G N + + P + + G+ D+ + I
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKT--LKGHNNYVFCCNFNPQSSLVVSGSFDESVRI 197
Query: 135 LDVR 138
DV+
Sbjct: 198 WDVK 201
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 180 PMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDIS 239
P G+Y SAD V +W++ M+C RT T + V I++S + SAS+D + I
Sbjct: 97 PCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIF 156
Query: 240 NVHTGRTVHQIPCRAAMNSV---EWNPKYNLLAYAGDDKN 276
+ T R + + N V +NP+ +L+ D++
Sbjct: 157 EIVTSRMTKTL--KGHNNYVFCCNFNPQSSLVVSGSFDES 194
Score = 99 (39.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP-VRTISFSHTGDYIASASEDLFIDISN 240
G A GS D LV +WD + C++T E P V + FS G YI +++ D + + +
Sbjct: 225 GSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Query: 241 VHTGRTVHQ 249
G+T+ Q
Sbjct: 285 FSKGKTLKQ 293
Score = 89 (36.4 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 29/98 (29%), Positives = 47/98 (47%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTI--SFSHTGD-YIASASE 232
+ P G+Y + DS + LWD S+ ++ +T E I +FS TG +I S SE
Sbjct: 262 VKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSE 321
Query: 233 DLFIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLA 269
D I I N+ T V + + + + +P N++A
Sbjct: 322 DCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIA 359
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 148 (57.2 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 36/124 (29%), Positives = 67/124 (54%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R TGHK V+ +AW+ + S S D+T +++ I K L+GH + V
Sbjct: 123 RTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKT----LKGHNNYVFCCN 178
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDEL 132
++P+ + L+ + S D++VR+WD ++G C + + ++ +++ DG+ IA G+ D +
Sbjct: 179 FNPQ-SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLV 237
Query: 133 TILD 136
I D
Sbjct: 238 RIWD 241
Score = 145 (56.1 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 44/164 (26%), Positives = 82/164 (50%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-VKDIELRGHADSVDQLCWDP 76
GH V +N + + SGS D++ R+W ++ G +K L H+D V + ++
Sbjct: 169 GHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT---GMCIKT--LPAHSDPVSAVSFN- 222
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITY---KPDGTHIAVGNRDDELT 133
+ LIA+ S D VR+WD +G+C + + EN + + P+G +I N D L
Sbjct: 223 RDGSLIASGSYDGLVRIWDTANGQCIKTL-VDDENPPVAFVKFSPNGKYILASNLDSTLK 281
Query: 134 ILDVRKFKPIHRRKFGYEVNEIA----WNMTGEMFFLTTGNAGC 173
+ D K K + ++ G+E ++ +++TG + ++ G+ C
Sbjct: 282 LWDFSKGKTL-KQYTGHENSKYCIFANFSVTGGKWIIS-GSEDC 323
Score = 125 (49.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 30/124 (24%), Positives = 64/124 (51%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH K + S ++ G L + S D+T ++W+++ H + + L GH V+ + W
Sbjct: 85 GHTKSISSAKFSPCGKYLGTSSADKTVKIWNMD-H---MICERTLTGHKLGVNDIAWS-S 139
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINI---TYKPDGTHIAVGNRDDELTI 134
+ + +AS DKT+++++ + + ++ L G N + + P + + G+ D+ + I
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKT--LKGHNNYVFCCNFNPQSSLVVSGSFDESVRI 197
Query: 135 LDVR 138
DV+
Sbjct: 198 WDVK 201
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 180 PMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDIS 239
P G+Y SAD V +W++ M+C RT T + V I++S + SAS+D + I
Sbjct: 97 PCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIF 156
Query: 240 NVHTGRTVHQIPCRAAMNSV---EWNPKYNLLAYAGDDKN 276
+ T R + + N V +NP+ +L+ D++
Sbjct: 157 EIVTSRMTKTL--KGHNNYVFCCNFNPQSSLVVSGSFDES 194
Score = 99 (39.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP-VRTISFSHTGDYIASASEDLFIDISN 240
G A GS D LV +WD + C++T E P V + FS G YI +++ D + + +
Sbjct: 225 GSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Query: 241 VHTGRTVHQ 249
G+T+ Q
Sbjct: 285 FSKGKTLKQ 293
Score = 89 (36.4 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 29/98 (29%), Positives = 47/98 (47%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTI--SFSHTGD-YIASASE 232
+ P G+Y + DS + LWD S+ ++ +T E I +FS TG +I S SE
Sbjct: 262 VKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSE 321
Query: 233 DLFIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLA 269
D I I N+ T V + + + + +P N++A
Sbjct: 322 DCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIA 359
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 193 (73.0 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 61/225 (27%), Positives = 105/225 (46%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V ++++ +G LAS S D T ++W + G ++ + GH +V +
Sbjct: 144 RTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--MHGHDHNVSSVA 199
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKP--DGTHIAVGNRDDE 131
P + D I +AS DKT+++W+ ++G C + E + + +P DGT IA + D
Sbjct: 200 IMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQT 257
Query: 132 LTILDVR-KFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNA-GCYCIAIDPMGRYFAVGS 189
+ + V K R+ + V I+W E + + A G G + GS
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISW--APESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 190 ADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASED 233
D + +WD+S +C+ T + W VR + F G +I S ++D
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Score = 154 (59.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 35/123 (28%), Positives = 63/123 (51%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH+ V V ++ + + S S D T +VW E + L+GH DSV+ + +D
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT----LKGHTDSVEDISFDH 160
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
L+A+ S D T++LWD + +C + N++ + P+G HI +RD + +
Sbjct: 161 S-GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 136 DVR 138
+V+
Sbjct: 220 EVQ 222
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 61/232 (26%), Positives = 106/232 (45%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V SVA G + S S D+T ++W ++ G+ VK GH + V ++
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT-GYC-VKTFT--GHREWV-RMV 240
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENIN--ITYKPDGTHIAVGNRDD 130
+ LIA+ S D+TVR+W + +C +AEL E++ I++ P+ ++ ++
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKEC--KAELREHEHVVECISWAPESSYSSIS---- 294
Query: 131 ELTILDVRKF-KPIHRRKFGYEVNEIA-WNMTGEMFFLT-TGNAGCYCIAIDPMGRYFAV 187
E T + +K KP G I W+++ M +T G+ + G F +
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 188 GSADS-LVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
AD + +WD C++T E V ++ F T Y+ + S D + +
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/101 (31%), Positives = 46/101 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
I+ D G+ A SAD + LWD C+RT + V +++ GD+I SAS D
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 236 IDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 275
I + V TG V R + V N L+A +D+
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRTISFSHTGDYIASASEDL 234
+AI P G + S D + +W++ CV+TFT EW VR + + G IAS S D
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQ 256
Query: 235 FIDISNVHTGRTVHQI-PCRAAMNSVEWNPK--YNLLAYAGDDKNKYQADEGVFRIYG 289
+ + V T ++ + + W P+ Y+ ++ A + K G F + G
Sbjct: 257 TVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Score = 39 (18.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 184 YFAVGSADSLVSLWD 198
Y GS D V +W+
Sbjct: 394 YVVTGSVDQTVKVWE 408
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 193 (73.0 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 61/225 (27%), Positives = 105/225 (46%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V ++++ +G LAS S D T ++W + G ++ + GH +V +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--MHGHDHNVSSVA 199
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKP--DGTHIAVGNRDDE 131
P + D I +AS DKT+++W+ ++G C + E + + +P DGT IA + D
Sbjct: 200 IMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQT 257
Query: 132 LTILDVR-KFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNA-GCYCIAIDPMGRYFAVGS 189
+ + V K R+ + V I+W E + + A G G + GS
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISW--APESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 190 ADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASED 233
D + +WD+S +C+ T + W VR + F G +I S ++D
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 61/232 (26%), Positives = 106/232 (45%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V SVA G + S S D+T ++W ++ G+ VK GH + V ++
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT-GYC-VKTFT--GHREWV-RMV 240
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENIN--ITYKPDGTHIAVGNRDD 130
+ LIA+ S D+TVR+W + +C +AEL E++ I++ P+ ++ ++
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKEC--KAELREHEHVVECISWAPESSYSSIS---- 294
Query: 131 ELTILDVRKF-KPIHRRKFGYEVNEIA-WNMTGEMFFLT-TGNAGCYCIAIDPMGRYFAV 187
E T + +K KP G I W+++ M +T G+ + G F +
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 188 GSADS-LVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
AD + +WD C++T E V ++ F T Y+ + S D + +
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 152 (58.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH+ V V ++ + + S S D T +VW E + L+GH DSV + +D
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT----LKGHTDSVQDISFDH 160
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
L+A+ S D T++LWD + +C + N++ + P+G HI +RD + +
Sbjct: 161 S-GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 136 DVR 138
+V+
Sbjct: 220 EVQ 222
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/101 (31%), Positives = 46/101 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
I+ D G+ A SAD + LWD C+RT + V +++ GD+I SAS D
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 236 IDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 275
I + V TG V R + V N L+A +D+
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRTISFSHTGDYIASASEDL 234
+AI P G + S D + +W++ CV+TFT EW VR + + G IAS S D
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQ 256
Query: 235 FIDISNVHTGRTVHQI-PCRAAMNSVEWNPK--YNLLAYAGDDKNKYQADEGVFRIYG 289
+ + V T ++ + + W P+ Y+ ++ A + K G F + G
Sbjct: 257 TVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 184 YFAVGSADSLVSLWD 198
Y GS D V +W+
Sbjct: 394 YVVTGSVDQTVKVWE 408
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 193 (73.0 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 61/225 (27%), Positives = 105/225 (46%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V ++++ +G LAS S D T ++W + G ++ + GH +V +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--MHGHDHNVSSVA 199
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKP--DGTHIAVGNRDDE 131
P + D I +AS DKT+++W+ ++G C + E + + +P DGT IA + D
Sbjct: 200 IMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQT 257
Query: 132 LTILDVR-KFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNA-GCYCIAIDPMGRYFAVGS 189
+ + V K R+ + V I+W E + + A G G + GS
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISW--APESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 190 ADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASED 233
D + +WD+S +C+ T + W VR + F G +I S ++D
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 61/232 (26%), Positives = 106/232 (45%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V SVA G + S S D+T ++W ++ G+ VK GH + V ++
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT-GYC-VKTFT--GHREWV-RMV 240
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENIN--ITYKPDGTHIAVGNRDD 130
+ LIA+ S D+TVR+W + +C +AEL E++ I++ P+ ++ ++
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKEC--KAELREHEHVVECISWAPESSYSSIS---- 294
Query: 131 ELTILDVRKF-KPIHRRKFGYEVNEIA-WNMTGEMFFLT-TGNAGCYCIAIDPMGRYFAV 187
E T + +K KP G I W+++ M +T G+ + G F +
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 188 GSADS-LVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
AD + +WD C++T E V ++ F T Y+ + S D + +
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 152 (58.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH+ V V ++ + + S S D T +VW E + L+GH DSV + +D
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT----LKGHTDSVQDISFDH 160
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
L+A+ S D T++LWD + +C + N++ + P+G HI +RD + +
Sbjct: 161 S-GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 136 DVR 138
+V+
Sbjct: 220 EVQ 222
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/101 (31%), Positives = 46/101 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
I+ D G+ A SAD + LWD C+RT + V +++ GD+I SAS D
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 236 IDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 275
I + V TG V R + V N L+A +D+
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRTISFSHTGDYIASASEDL 234
+AI P G + S D + +W++ CV+TFT EW VR + + G IAS S D
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQ 256
Query: 235 FIDISNVHTGRTVHQI-PCRAAMNSVEWNPK--YNLLAYAGDDKNKYQADEGVFRIYG 289
+ + V T ++ + + W P+ Y+ ++ A + K G F + G
Sbjct: 257 TVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 184 YFAVGSADSLVSLWD 198
Y GS D V +W+
Sbjct: 394 YVVTGSVDQTVKVWE 408
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 193 (73.0 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 61/225 (27%), Positives = 105/225 (46%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V ++++ +G LAS S D T ++W + G ++ + GH +V +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--MHGHDHNVSSVA 199
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKP--DGTHIAVGNRDDE 131
P + D I +AS DKT+++W+ ++G C + E + + +P DGT IA + D
Sbjct: 200 IMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQT 257
Query: 132 LTILDVR-KFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNA-GCYCIAIDPMGRYFAVGS 189
+ + V K R+ + V I+W E + + A G G + GS
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISW--APESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 190 ADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASED 233
D + +WD+S +C+ T + W VR + F G +I S ++D
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 61/232 (26%), Positives = 106/232 (45%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V SVA G + S S D+T ++W ++ G+ VK GH + V ++
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT-GYC-VKTFT--GHREWV-RMV 240
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENIN--ITYKPDGTHIAVGNRDD 130
+ LIA+ S D+TVR+W + +C +AEL E++ I++ P+ ++ ++
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKEC--KAELREHEHVVECISWAPESSYSSIS---- 294
Query: 131 ELTILDVRKF-KPIHRRKFGYEVNEIA-WNMTGEMFFLT-TGNAGCYCIAIDPMGRYFAV 187
E T + +K KP G I W+++ M +T G+ + G F +
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 188 GSADS-LVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
AD + +WD C++T E V ++ F T Y+ + S D + +
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 152 (58.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH+ V V ++ + + S S D T +VW E + L+GH DSV + +D
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT----LKGHTDSVQDISFDH 160
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
L+A+ S D T++LWD + +C + N++ + P+G HI +RD + +
Sbjct: 161 S-GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 136 DVR 138
+V+
Sbjct: 220 EVQ 222
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/101 (31%), Positives = 46/101 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
I+ D G+ A SAD + LWD C+RT + V +++ GD+I SAS D
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 236 IDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 275
I + V TG V R + V N L+A +D+
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRTISFSHTGDYIASASEDL 234
+AI P G + S D + +W++ CV+TFT EW VR + + G IAS S D
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQ 256
Query: 235 FIDISNVHTGRTVHQI-PCRAAMNSVEWNPK--YNLLAYAGDDKNKYQADEGVFRIYG 289
+ + V T ++ + + W P+ Y+ ++ A + K G F + G
Sbjct: 257 TVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 184 YFAVGSADSLVSLWD 198
Y GS D V +W+
Sbjct: 394 YVVTGSVDQTVKVWE 408
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 193 (73.0 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 61/225 (27%), Positives = 105/225 (46%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V ++++ +G LAS S D T ++W + G ++ + GH +V +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--MHGHDHNVSSVA 199
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKP--DGTHIAVGNRDDE 131
P + D I +AS DKT+++W+ ++G C + E + + +P DGT IA + D
Sbjct: 200 IMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQT 257
Query: 132 LTILDVR-KFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNA-GCYCIAIDPMGRYFAVGS 189
+ + V K R+ + V I+W E + + A G G + GS
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISW--APESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 190 ADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASED 233
D + +WD+S +C+ T + W VR + F G +I S ++D
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 61/232 (26%), Positives = 106/232 (45%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V SVA G + S S D+T ++W ++ G+ VK GH + V ++
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT-GYC-VKTFT--GHREWV-RMV 240
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENIN--ITYKPDGTHIAVGNRDD 130
+ LIA+ S D+TVR+W + +C +AEL E++ I++ P+ ++ ++
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKEC--KAELREHEHVVECISWAPESSYSSIS---- 294
Query: 131 ELTILDVRKF-KPIHRRKFGYEVNEIA-WNMTGEMFFLT-TGNAGCYCIAIDPMGRYFAV 187
E T + +K KP G I W+++ M +T G+ + G F +
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 188 GSADS-LVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
AD + +WD C++T E V ++ F T Y+ + S D + +
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 152 (58.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH+ V V ++ + + S S D T +VW E + L+GH DSV + +D
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT----LKGHTDSVQDISFDH 160
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
L+A+ S D T++LWD + +C + N++ + P+G HI +RD + +
Sbjct: 161 S-GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 136 DVR 138
+V+
Sbjct: 220 EVQ 222
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/101 (31%), Positives = 46/101 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
I+ D G+ A SAD + LWD C+RT + V +++ GD+I SAS D
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 236 IDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 275
I + V TG V R + V N L+A +D+
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRTISFSHTGDYIASASEDL 234
+AI P G + S D + +W++ CV+TFT EW VR + + G IAS S D
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQ 256
Query: 235 FIDISNVHTGRTVHQI-PCRAAMNSVEWNPK--YNLLAYAGDDKNKYQADEGVFRIYG 289
+ + V T ++ + + W P+ Y+ ++ A + K G F + G
Sbjct: 257 TVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 184 YFAVGSADSLVSLWD 198
Y GS D V +W+
Sbjct: 394 YVVTGSVDQTVKVWE 408
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 193 (73.0 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 61/225 (27%), Positives = 105/225 (46%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V ++++ +G LAS S D T ++W + G ++ + GH +V +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--MHGHDHNVSSVA 199
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKP--DGTHIAVGNRDDE 131
P + D I +AS DKT+++W+ ++G C + E + + +P DGT IA + D
Sbjct: 200 IMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQT 257
Query: 132 LTILDVR-KFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNA-GCYCIAIDPMGRYFAVGS 189
+ + V K R+ + V I+W E + + A G G + GS
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISW--APESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 190 ADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASED 233
D + +WD+S +C+ T + W VR + F G +I S ++D
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 61/232 (26%), Positives = 106/232 (45%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V SVA G + S S D+T ++W ++ G+ VK GH + V ++
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT-GYC-VKTFT--GHREWV-RMV 240
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENIN--ITYKPDGTHIAVGNRDD 130
+ LIA+ S D+TVR+W + +C +AEL E++ I++ P+ ++ ++
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKEC--KAELREHEHVVECISWAPESSYSSIS---- 294
Query: 131 ELTILDVRKF-KPIHRRKFGYEVNEIA-WNMTGEMFFLT-TGNAGCYCIAIDPMGRYFAV 187
E T + +K KP G I W+++ M +T G+ + G F +
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 188 GSADS-LVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
AD + +WD C++T E V ++ F T Y+ + S D + +
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 152 (58.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH+ V V ++ + + S S D T +VW E + L+GH DSV + +D
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT----LKGHTDSVQDISFDH 160
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
L+A+ S D T++LWD + +C + N++ + P+G HI +RD + +
Sbjct: 161 S-GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 136 DVR 138
+V+
Sbjct: 220 EVQ 222
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/101 (31%), Positives = 46/101 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
I+ D G+ A SAD + LWD C+RT + V +++ GD+I SAS D
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 236 IDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 275
I + V TG V R + V N L+A +D+
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRTISFSHTGDYIASASEDL 234
+AI P G + S D + +W++ CV+TFT EW VR + + G IAS S D
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQ 256
Query: 235 FIDISNVHTGRTVHQI-PCRAAMNSVEWNPK--YNLLAYAGDDKNKYQADEGVFRIYG 289
+ + V T ++ + + W P+ Y+ ++ A + K G F + G
Sbjct: 257 TVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 184 YFAVGSADSLVSLWD 198
Y GS D V +W+
Sbjct: 394 YVVTGSVDQTVKVWE 408
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 193 (73.0 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 61/225 (27%), Positives = 105/225 (46%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V ++++ +G LAS S D T ++W + G ++ + GH +V +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--MHGHDHNVSSVA 199
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKP--DGTHIAVGNRDDE 131
P + D I +AS DKT+++W+ ++G C + E + + +P DGT IA + D
Sbjct: 200 IMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQT 257
Query: 132 LTILDVR-KFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNA-GCYCIAIDPMGRYFAVGS 189
+ + V K R+ + V I+W E + + A G G + GS
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISW--APESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 190 ADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASED 233
D + +WD+S +C+ T + W VR + F G +I S ++D
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 61/232 (26%), Positives = 106/232 (45%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V SVA G + S S D+T ++W ++ G+ VK GH + V ++
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT-GYC-VKTFT--GHREWV-RMV 240
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENIN--ITYKPDGTHIAVGNRDD 130
+ LIA+ S D+TVR+W + +C +AEL E++ I++ P+ ++ ++
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKEC--KAELREHEHVVECISWAPESSYSSIS---- 294
Query: 131 ELTILDVRKF-KPIHRRKFGYEVNEIA-WNMTGEMFFLT-TGNAGCYCIAIDPMGRYFAV 187
E T + +K KP G I W+++ M +T G+ + G F +
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 188 GSADS-LVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
AD + +WD C++T E V ++ F T Y+ + S D + +
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 152 (58.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH+ V V ++ + + S S D T +VW E + L+GH DSV + +D
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT----LKGHTDSVQDISFDH 160
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
L+A+ S D T++LWD + +C + N++ + P+G HI +RD + +
Sbjct: 161 S-GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 136 DVR 138
+V+
Sbjct: 220 EVQ 222
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/101 (31%), Positives = 46/101 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
I+ D G+ A SAD + LWD C+RT + V +++ GD+I SAS D
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 236 IDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 275
I + V TG V R + V N L+A +D+
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRTISFSHTGDYIASASEDL 234
+AI P G + S D + +W++ CV+TFT EW VR + + G IAS S D
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQ 256
Query: 235 FIDISNVHTGRTVHQI-PCRAAMNSVEWNPK--YNLLAYAGDDKNKYQADEGVFRIYG 289
+ + V T ++ + + W P+ Y+ ++ A + K G F + G
Sbjct: 257 TVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 184 YFAVGSADSLVSLWD 198
Y GS D V +W+
Sbjct: 394 YVVTGSVDQTVKVWE 408
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 193 (73.0 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 61/225 (27%), Positives = 105/225 (46%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V ++++ +G LAS S D T ++W + G ++ + GH +V +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--MHGHDHNVSSVA 199
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKP--DGTHIAVGNRDDE 131
P + D I +AS DKT+++W+ ++G C + E + + +P DGT IA + D
Sbjct: 200 IMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQT 257
Query: 132 LTILDVR-KFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNA-GCYCIAIDPMGRYFAVGS 189
+ + V K R+ + V I+W E + + A G G + GS
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISW--APESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 190 ADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASED 233
D + +WD+S +C+ T + W VR + F G +I S ++D
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 61/232 (26%), Positives = 106/232 (45%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V SVA G + S S D+T ++W ++ G+ VK GH + V ++
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT-GYC-VKTFT--GHREWV-RMV 240
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENIN--ITYKPDGTHIAVGNRDD 130
+ LIA+ S D+TVR+W + +C +AEL E++ I++ P+ ++ ++
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKEC--KAELREHEHVVECISWAPESSYSSIS---- 294
Query: 131 ELTILDVRKF-KPIHRRKFGYEVNEIA-WNMTGEMFFLT-TGNAGCYCIAIDPMGRYFAV 187
E T + +K KP G I W+++ M +T G+ + G F +
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 188 GSADS-LVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
AD + +WD C++T E V ++ F T Y+ + S D + +
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 152 (58.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH+ V V ++ + + S S D T +VW E + L+GH DSV + +D
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT----LKGHTDSVQDISFDH 160
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
L+A+ S D T++LWD + +C + N++ + P+G HI +RD + +
Sbjct: 161 S-GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 136 DVR 138
+V+
Sbjct: 220 EVQ 222
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/101 (31%), Positives = 46/101 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
I+ D G+ A SAD + LWD C+RT + V +++ GD+I SAS D
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 236 IDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 275
I + V TG V R + V N L+A +D+
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRTISFSHTGDYIASASEDL 234
+AI P G + S D + +W++ CV+TFT EW VR + + G IAS S D
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQ 256
Query: 235 FIDISNVHTGRTVHQI-PCRAAMNSVEWNPK--YNLLAYAGDDKNKYQADEGVFRIYG 289
+ + V T ++ + + W P+ Y+ ++ A + K G F + G
Sbjct: 257 TVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 184 YFAVGSADSLVSLWD 198
Y GS D V +W+
Sbjct: 394 YVVTGSVDQTVKVWE 408
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 193 (73.0 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 61/225 (27%), Positives = 105/225 (46%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V ++++ +G LAS S D T ++W + G ++ + GH +V +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--MHGHDHNVSSVA 199
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKP--DGTHIAVGNRDDE 131
P + D I +AS DKT+++W+ ++G C + E + + +P DGT IA + D
Sbjct: 200 IMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQT 257
Query: 132 LTILDVR-KFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNA-GCYCIAIDPMGRYFAVGS 189
+ + V K R+ + V I+W E + + A G G + GS
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISW--APESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 190 ADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASED 233
D + +WD+S +C+ T + W VR + F G +I S ++D
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 61/232 (26%), Positives = 106/232 (45%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V SVA G + S S D+T ++W ++ G+ VK GH + V ++
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT-GYC-VKTFT--GHREWV-RMV 240
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENIN--ITYKPDGTHIAVGNRDD 130
+ LIA+ S D+TVR+W + +C +AEL E++ I++ P+ ++ ++
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKEC--KAELREHEHVVECISWAPESSYSSIS---- 294
Query: 131 ELTILDVRKF-KPIHRRKFGYEVNEIA-WNMTGEMFFLT-TGNAGCYCIAIDPMGRYFAV 187
E T + +K KP G I W+++ M +T G+ + G F +
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 188 GSADS-LVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
AD + +WD C++T E V ++ F T Y+ + S D + +
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 152 (58.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH+ V V ++ + + S S D T +VW E + L+GH DSV + +D
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT----LKGHTDSVQDISFDH 160
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
L+A+ S D T++LWD + +C + N++ + P+G HI +RD + +
Sbjct: 161 S-GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 136 DVR 138
+V+
Sbjct: 220 EVQ 222
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/101 (31%), Positives = 46/101 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
I+ D G+ A SAD + LWD C+RT + V +++ GD+I SAS D
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 236 IDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 275
I + V TG V R + V N L+A +D+
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRTISFSHTGDYIASASEDL 234
+AI P G + S D + +W++ CV+TFT EW VR + + G IAS S D
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQ 256
Query: 235 FIDISNVHTGRTVHQI-PCRAAMNSVEWNPK--YNLLAYAGDDKNKYQADEGVFRIYG 289
+ + V T ++ + + W P+ Y+ ++ A + K G F + G
Sbjct: 257 TVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 184 YFAVGSADSLVSLWD 198
Y GS D V +W+
Sbjct: 394 YVVTGSVDQTVKVWE 408
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 195 (73.7 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 73/257 (28%), Positives = 116/257 (45%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + S+ WN G L +GSVD+TA VW ++ K + E H+ + W ++
Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAE-EWK-QQFEF--HSGPTLDVDW--RN 417
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGEN--IN-ITYKPDGTHIAVGNRDDELTIL 135
AT+S D + L + G+ +G +N + + P G+ +A + D I
Sbjct: 418 NVSFATSSTDSMIYL--CKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIW 475
Query: 136 DVRKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLV 194
++++ +H R+ E+ I W+ TG T N A S DS V
Sbjct: 476 NIKQSTFVHDLREHTKEIYTIRWSPTGP----GTNNPNKQLT--------LASASFDSTV 523
Query: 195 SLWD--ISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC 252
LWD + +MLC +F PV +++FS G+YIAS S D I I ++ G+ V
Sbjct: 524 KLWDAELGKMLC--SFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTG 581
Query: 253 RAAMNSVEWNPKYNLLA 269
+ V WN + N +A
Sbjct: 582 NGGIFEVCWNKEGNKIA 598
Score = 191 (72.3 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 51/159 (32%), Positives = 82/159 (51%)
Query: 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
++ +TGH+ +V+ V W+ TG+ LAS S D TA++W+I+ V D LR H + +
Sbjct: 441 AKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTF--VHD--LREHTKEIYTI 496
Query: 73 CWDPK-------HADL-IATASGDKTVRLWDARSGK--CSQQAELSGENINITYKPDGTH 122
W P + L +A+AS D TV+LWDA GK CS ++ + P+G +
Sbjct: 497 RWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPV-YSLAFSPNGEY 555
Query: 123 IAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTG 161
IA G+ D + I +++ K + + E+ WN G
Sbjct: 556 IASGSLDKSIHIWSIKEGKIVKTYTGNGGIFEVCWNKEG 594
Score = 169 (64.5 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 73/276 (26%), Positives = 114/276 (41%)
Query: 4 SSIPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKV----KD 59
S IP N R GH +V + AW+ + + LASGS D TAR+W I P G K ++
Sbjct: 251 SHIP--NSDVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSI-PEGSFKAVHTGRN 307
Query: 60 IE--LRGHADS--------VDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG 109
I + HA V L W+ + L+AT S D R+W S ++ G
Sbjct: 308 INALILKHAKGKSNEKSKDVTTLDWNGE-GTLLATGSCDGQARIWTLNGELISTLSKHKG 366
Query: 110 ENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTG 169
++ + G ++ G+ D + DV+ E W + F +G
Sbjct: 367 PIFSLKWNKKGDYLLTGSVDRTAVVWDVK-------------AEE--WK---QQFEFHSG 408
Query: 170 NAGCYCIAIDPMGRY-FAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIA 228
+ +D FA S DS++ L I E +TFT + V + + TG +A
Sbjct: 409 PT----LDVDWRNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLA 464
Query: 229 SASEDLFIDISNVHTGRTVHQIPCRAA-MNSVEWNP 263
S S+D I N+ VH + + ++ W+P
Sbjct: 465 SCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSP 500
Score = 157 (60.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 58/246 (23%), Positives = 99/246 (40%)
Query: 31 TGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKT 90
TG + + T++ HI P+ ++ L GH V W P A L+A+ SGD T
Sbjct: 235 TGAEPMDIVMTPTSQTSHI-PNSDVRI----LEGHTSEVCACAWSPS-ASLLASGSGDAT 288
Query: 91 VRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY 150
R+W G S +A +G NIN + + ++T LD +
Sbjct: 289 ARIWSIPEG--SFKAVHTGRNINALILKHAKGKS-NEKSKDVTTLDWNGEGTLLATG-SC 344
Query: 151 EVNEIAWNMTGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 209
+ W + GE+ + + G + + + G Y GS D +WD+ + F
Sbjct: 345 DGQARIWTLNGELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFE 404
Query: 210 KLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLL 268
P + + + + A++S D I + + R + +N V+W+P +LL
Sbjct: 405 FHSGPTLDVDWRNNVSF-ATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLL 463
Query: 269 AYAGDD 274
A DD
Sbjct: 464 ASCSDD 469
Score = 137 (53.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 19 HKKKVHSVAWNCTGT---------KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H K+++++ W+ TG LAS S D T ++W E GK+ GH + V
Sbjct: 489 HTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAEL---GKML-CSFNGHREPV 544
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
L + P + + IA+ S DK++ +W + GK + +G + + +G IA D
Sbjct: 545 YSLAFSP-NGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGGIFEVCWNKEGNKIAACFAD 603
Query: 130 DELTILDVR 138
+ + +LD R
Sbjct: 604 NSVCVLDFR 612
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 131 (51.2 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 32/81 (39%), Positives = 38/81 (46%)
Query: 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
E GH + + V + G +AS S D TAR+W E H L GH V L W
Sbjct: 175 ELRGHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDT----LVGHMAGVSCLAW 230
Query: 75 DPKHADLIATASGDKTVRLWD 95
P L AT S DK +RLWD
Sbjct: 231 SPDSGTL-ATGSDDKAIRLWD 250
Score = 130 (50.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL- 72
R GH V+ +A++ G LASGS D+ +W + G++ L H+D V +
Sbjct: 300 RPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRA---GRLMR-SLPAHSDPVSGID 355
Query: 73 -CWDPKHADLIATASGDKTVRLWDARSGKCSQQA--ELSGENINITYKPDGTHIAVGNRD 129
C D L+ + S D +R+WD +G+C + E + N+ + P+G +I N D
Sbjct: 356 FCRD---GTLVVSCSTDGLIRIWDTATGQCLRTLVHEDNPAVTNVCFSPNGRYILAFNLD 412
Query: 130 DELTILD 136
+ + D
Sbjct: 413 SCIRLWD 419
Score = 113 (44.8 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 36/103 (34%), Positives = 50/103 (48%)
Query: 174 YCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
YC+A P G A GS D V LWD+ +R+ PV I F G + S S D
Sbjct: 310 YCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCRDGTLVVSCSTD 369
Query: 234 LFIDISNVHTG---RT-VHQIPCRAAMNSVEWNP--KYNLLAY 270
I I + TG RT VH+ A+ +V ++P +Y +LA+
Sbjct: 370 GLIRIWDTATGQCLRTLVHED--NPAVTNVCFSPNGRY-ILAF 409
Score = 108 (43.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 60 IELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQ--AELSGENINITYK 117
+ELRGH+ + Q+ P + IA+AS D T R+WDA +G ++G + + +
Sbjct: 174 LELRGHSQPIAQVRISP-NGRWIASASADGTARIWDAETGAHIDTLVGHMAGVSC-LAWS 231
Query: 118 PDGTHIAVGNRDDELTILDVRKFKPIH 144
PD +A G+ D + + D +P H
Sbjct: 232 PDSGTLATGSDDKAIRLWDRITAEPAH 258
Score = 63 (27.2 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVW 47
H GH V +AW+ LA+GS D+ R+W
Sbjct: 214 HIDTLVGHMAGVSCLAWSPDSGTLATGSDDKAIRLW 249
Score = 55 (24.4 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRA 254
V ++FS G+ +AS S D + + +V GR + +P +
Sbjct: 309 VYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHS 348
Score = 54 (24.1 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWD 198
+ P GRY + DS + LWD
Sbjct: 397 VCFSPNGRYILAFNLDSCIRLWD 419
Score = 44 (20.5 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 114 ITYKPDGTHIAVGNRDDELTILDVR 138
+ + P G +A G+ D+ + + DVR
Sbjct: 312 LAFSPKGNILASGSYDEAVFLWDVR 336
Score = 40 (19.1 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 226 YIASASEDLFIDISNVHTGRTVHQI 250
++ASASED I + +V + V +I
Sbjct: 488 FVASASEDGHIVLWDVKSKEVVQKI 512
Score = 39 (18.8 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 184 YFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
+ A S D + LWD+ V+ + + GD + SA +D
Sbjct: 488 FVASASEDGHIVLWDVKSKEVVQKIAAHDGVCFWVDV--VGDTMVSAGKD 535
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 39/138 (28%), Positives = 67/138 (48%)
Query: 25 SVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIAT 84
S+A++ G +ASG++D ++ + GKV L GHA V LC+ P ++ L+ T
Sbjct: 175 SIAYSPDGKYIASGAIDGIITIFDVAA---GKVVQT-LEGHAMPVRSLCFSP-NSQLLLT 229
Query: 85 ASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDVRKFK 141
AS D ++L+D LSG + + + DG H A + D+ + I D + K
Sbjct: 230 ASDDGHMKLYDVTHSDVV--GTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERK 287
Query: 142 PIHRRKFGYEVNEIAWNM 159
+H F +++ W +
Sbjct: 288 CLHT--FAEHTDQV-WGV 302
Score = 123 (48.4 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 168 TGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDY 226
+G+A C+A G++FA S+D+ V +WD SE C+ TF + V + +S D
Sbjct: 251 SGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDK 310
Query: 227 IASASEDLFIDI 238
+ASASED ++I
Sbjct: 311 VASASEDKSLNI 322
Score = 114 (45.2 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V SVA + G +AS S+D T +W G K + G D + + + P
Sbjct: 83 GHALGVVSVAVSSDGQTIASSSLDSTMCLWDARS---GDKKHLLSFGPVD-LWTVQFSPC 138
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAEL-SGE-NINITYKPDGTHIAVGNRDDELTIL 135
+ +I+ + K + ++ +GK Q + +G+ ++I Y PDG +IA G D +TI
Sbjct: 139 NKYVISGLNDGK-ISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIF 197
Query: 136 DVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGNAG 172
DV K + + V + ++ ++ LT + G
Sbjct: 198 DVAAGKVVQTLEGHAMPVRSLCFSPNSQLL-LTASDDG 234
Score = 105 (42.0 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 28/108 (25%), Positives = 51/108 (47%)
Query: 35 LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94
L +G +D +VW ++ K++ +L+GHA V + IA++S D T+ LW
Sbjct: 55 LVTGGLDDLVKVWDLQEDNTLKLRH-KLKGHALGVVSVAVS-SDGQTIASSSLDSTMCLW 112
Query: 95 DARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTILDVRKFK 141
DARSG ++ + + P ++ G D ++++ V K
Sbjct: 113 DARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGK 160
Score = 77 (32.2 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 24/103 (23%), Positives = 46/103 (44%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRTISFSHTGDYIASASEDL 234
+ P + S D + L+D++ V T + W V ++FS G + AS+S D
Sbjct: 218 LCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASW-VLCVAFSEDGKHFASSSSDN 276
Query: 235 FIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKN 276
+ I + + +H + V ++P + +A A +DK+
Sbjct: 277 SVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKS 319
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 195 (73.7 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 59/212 (27%), Positives = 103/212 (48%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-GHADSVDQLCW 74
Y GH V ++ G AS S D+TAR+W ++ +++ + + GH VD + W
Sbjct: 456 YKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMD-----RIQPLRIMAGHLSDVDCVQW 510
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDE 131
P + + IAT S DKTVRLWD ++G+C + G +++ PDG ++A G+ D
Sbjct: 511 HP-NCNYIATGSSDKTVRLWDVQTGECVRI--FIGHRSMVLSLAMSPDGRYMASGDEDGT 567
Query: 132 LTILDVRKFKPIHRRKFGYEVNEIAWNMT--GEMFFLTTGNAGCYCIAIDPMGRYFAVGS 189
+ + D+ + I G+ N W+++ GE L +G+A C + + + +
Sbjct: 568 IMMWDLSTARCI-TPLMGH--NSCVWSLSYSGEGSLLASGSADC-TVKLWDVTSSTKLTK 623
Query: 190 ADSLVSLWDISEMLCVRTFTKLEWPVRTISFS 221
A+ + + + +RTF PV + FS
Sbjct: 624 AEEKNG--NSNRLRSLRTFPTKSTPVHALRFS 653
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V V W+ +A+GS D+T R+W ++ G+ I + GH V L
Sbjct: 496 RIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQT---GECVRIFI-GHRSMVLSLA 551
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI---NITYKPDGTHIAVGNRDD 130
P +A+ D T+ +WD + +C L G N +++Y +G+ +A G+ D
Sbjct: 552 MSPD-GRYMASGDEDGTIMMWDLSTARCI--TPLMGHNSCVWSLSYSGEGSLLASGSADC 608
Query: 131 ELTILDV 137
+ + DV
Sbjct: 609 TVKLWDV 615
Score = 119 (46.9 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 30/92 (32%), Positives = 44/92 (47%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
C+ P Y A GS+D V LWD+ CVR F V +++ S G Y+AS ED
Sbjct: 507 CVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDG 566
Query: 235 FIDISNVHTGRTVHQIPCRAAMNSVEWNPKYN 266
I + ++ T R + + NS W+ Y+
Sbjct: 567 TIMMWDLSTARCITPL---MGHNSCVWSLSYS 595
Score = 41 (19.5 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 32 GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQ 71
G+ +A G D + +VW + G + L+ DS DQ
Sbjct: 364 GSLVAGGFSDSSIKVWDMAKIG--QAGSGALQAENDSSDQ 401
>RGD|1565589 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1565589 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 IPI:IPI00767527 PRIDE:F1LTR1
Ensembl:ENSRNOT00000005059 Uniprot:F1LTR1
Length = 622
Score = 141 (54.7 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 35/116 (30%), Positives = 58/116 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
T H +V ++ GTKLA+GS D T VW ++ H +K ++ L GHA V + W
Sbjct: 313 TEHCNEVWFCKFSNDGTKLATGSKDTTVIVWQVDADTH-LLKLLKTLEGHAYGVSYIAWS 371
Query: 76 PKHADLIATASGD-KTVRLWDARSGKCSQQAELSGEN--INITYKPDGTHIAVGNR 128
P + L+A D + LW+ ++G+ + S E+ ++ + PDG G +
Sbjct: 372 PDDSYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 427
Score = 101 (40.6 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 178 IDPMGRYFAVGSADSLVSLWDISEMLCVRTF---TKLEWPVRTISFSHTGDYIASASEDL 234
I GR + A V LWD+ + + VR + T+ + + + H D+IAS SED
Sbjct: 495 ISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDH 554
Query: 235 FIDISNVHTGRTVHQIPCRA-AMNSVEWNPKY-NLLAYAGDD 274
+ I + + + ++ +N V WNP+ +++A A DD
Sbjct: 555 KVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDD 596
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 136 (52.9 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 34/122 (27%), Positives = 59/122 (48%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R + GHK + S ++ ++A+ S D +W ++PH GH D V L
Sbjct: 12 RSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARA----YRYVGHKDVVTSLQ 67
Query: 74 WDPKHADLIATASGDKTVRLWDA-RSGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
+ P+ +L+A+AS D+TVRLW R GK S+ + ++ + DG + + D +
Sbjct: 68 FSPQ-GNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSI 126
Query: 133 TI 134
+
Sbjct: 127 KV 128
Score = 122 (48.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 43/162 (26%), Positives = 71/162 (43%)
Query: 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
S E+ H V SV ++ G L + S D++ +VW + L H V
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFL----YSLYRHTHWVRCA 150
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDE 131
+ P LI + S DKT+++WD + +C S N + + P+GT IA D
Sbjct: 151 KFSPD-GRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHA 209
Query: 132 LTILDVRKFKPI-HRRKFGYEVNEIAWNMTGEMFFLTTGNAG 172
+ I D+R K + H + VN ++++ G +T + G
Sbjct: 210 VKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSL-VTASSDG 250
Score = 118 (46.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 36/128 (28%), Positives = 57/128 (44%)
Query: 12 HSR--EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H+R Y GHK V S+ ++ G LAS S D+T R+W ++ G K E + H V
Sbjct: 50 HARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKG----KSSEFKAHTAPV 105
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT-YKPDGTHIAVGNR 128
+ + L+ TAS DK++++W + + + PDG I +
Sbjct: 106 RSVDFSAD-GQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 129 DDELTILD 136
D + I D
Sbjct: 165 DKTIKIWD 172
Score = 103 (41.3 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 29/121 (23%), Positives = 47/121 (38%)
Query: 157 WNMTGEMFF--LTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+M + F L C P GR S D + +WD + CV F+
Sbjct: 129 WSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGD 273
+ F+ G IASA D + I ++ + + + +N + ++P N L A
Sbjct: 189 ANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASS 248
Query: 274 D 274
D
Sbjct: 249 D 249
Score = 90 (36.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 170 NAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIAS 229
+ G C++ P+G S+D V + D+ E + T PV T+SFS G+ + S
Sbjct: 228 SCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTS 287
Query: 230 ASED 233
D
Sbjct: 288 GGAD 291
Score = 86 (35.3 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 26/95 (27%), Positives = 38/95 (40%)
Query: 182 GRYFAVGSADSLVSLWDI-SEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISN 240
G+ S D + +W + + + W VR FS G I S SED I I +
Sbjct: 114 GQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 241 VHTGRTVHQIPCRAAM-NSVEWNPKYNLLAYAGDD 274
+ V+ N V++NP +A AG D
Sbjct: 173 TTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSD 207
Score = 74 (31.1 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 22/100 (22%), Positives = 44/100 (44%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+ +P G A +D V +WDI ++ + V +SF G+ + +AS D
Sbjct: 192 VDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGT 251
Query: 236 IDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGDD 274
+ + ++ GR ++ + + +V ++ LL G D
Sbjct: 252 VKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGAD 291
Score = 46 (21.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 161 GEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLW 197
G + + G+ G + ++ G G AD+ V +W
Sbjct: 260 GRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 190 (71.9 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 60/225 (26%), Positives = 105/225 (46%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V ++++ +G LAS S D T ++W + G ++ + GH +V +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--MHGHDHNVSSVA 199
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKP--DGTHIAVGNRDDE 131
P + D I +A+ DKT+++W+ ++G C + E + + +P DGT IA + D
Sbjct: 200 IMP-NGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQT 257
Query: 132 LTILDVR-KFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNA-GCYCIAIDPMGRYFAVGS 189
+ + V K R+ + V I+W E + + A G G + GS
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISW--APESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 190 ADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASED 233
D + +WD+S +C+ T + W VR + F G +I S ++D
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Score = 150 (57.9 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 60/232 (25%), Positives = 106/232 (45%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V SVA G + S + D+T ++W ++ G+ VK GH + V ++
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQT-GYC-VKTFT--GHREWV-RMV 240
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENIN--ITYKPDGTHIAVGNRDD 130
+ LIA+ S D+TVR+W + +C +AEL E++ I++ P+ ++ ++
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKEC--KAELREHEHVVECISWAPESSYSSIS---- 294
Query: 131 ELTILDVRKF-KPIHRRKFGYEVNEIA-WNMTGEMFFLT-TGNAGCYCIAIDPMGRYFAV 187
E T + +K KP G I W+++ M +T G+ + G F +
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 188 GSADS-LVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
AD + +WD C++T E V ++ F T Y+ + S D + +
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 149 (57.5 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 35/123 (28%), Positives = 61/123 (49%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH+ V V ++ + + S S D T +VW E + L+GH DSV + +D
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT----LKGHTDSVQDISFDH 160
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
L+A+ S D T++LWD + +C + N++ + P+G HI RD + +
Sbjct: 161 S-GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMW 219
Query: 136 DVR 138
+V+
Sbjct: 220 EVQ 222
Score = 39 (18.8 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 184 YFAVGSADSLVSLWD 198
Y GS D V +W+
Sbjct: 394 YVVTGSVDQTVKVWE 408
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 190 (71.9 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 62/249 (24%), Positives = 114/249 (45%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V + ++ TG LAS S D T ++W + + K L GH +V +
Sbjct: 142 RTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKT----LHGHDHNVSCVR 197
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDEL 132
+ P D + ++S DKT+++W+A +G C + + + IT DG+ IA + D +
Sbjct: 198 FTPS-GDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTI 256
Query: 133 TILDVRKFKPIHR-RKFGYEVNEIAWNMTGEMFF---LTTGNAGCYCIAIDPMGR----- 183
++ K + + R+ + V +A++ + L + G + P G
Sbjct: 257 KTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQC 316
Query: 184 -YFAVGSADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASEDLFIDISNV 241
Y A GS D + +W+++ C+ T+ + W VR + F G ++ S +D I + ++
Sbjct: 317 GYLATGSRDKTIKIWELATGRCLATYIGHDNW-VRAVRFHPCGKFLLSVGDDKTIRVWDI 375
Query: 242 HTGRTVHQI 250
GR + I
Sbjct: 376 AQGRCIKTI 384
Score = 147 (56.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 33/119 (27%), Positives = 65/119 (54%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
TGH+ ++SV ++ + + + S S D T +VW E G+ + L+GH ++V + +D
Sbjct: 103 TGHRNCINSVKFHPSFSLMVSASEDATIKVWDFES---GEFERT-LKGHTNAVQDIDFD- 157
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTI 134
K +L+A+ S D T++LWD ++ C + N++ + + P G + +RD + +
Sbjct: 158 KTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKV 216
Score = 63 (27.2 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 19/86 (22%), Positives = 37/86 (43%)
Query: 157 WNM-TGEMFFLTTGNAGCY-CIAIDPMGRYF-AVGSADSLVSLWDISEMLCVRTFTKLEW 213
W + TG G+ + P G++ +VG D + +WDI++ C++T +
Sbjct: 331 WELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGD-DKTIRVWDIAQGRCIKTINEAHT 389
Query: 214 P-VRTISFSHTGDYIASASEDLFIDI 238
+ + F +IA+ D I +
Sbjct: 390 HFISCLDFCLHNPHIATGGVDDVIKV 415
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 140 (54.3 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 45/158 (28%), Positives = 74/158 (46%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75
+ H V+ VAW+ G +AS D+T ++W EP G V E H+ +V + +D
Sbjct: 56 FASHSAPVNGVAWSPKGNLVASAGHDRTVKIW--EPKLRG-VSG-EFVAHSKAVRSVDFD 111
Query: 76 PKHADLIATASGDKTVRLWD-ARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTI 134
L+ TAS DK+ ++W AR S A+ + + + P+G +A + D + I
Sbjct: 112 ST-GHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRI 170
Query: 135 LDVRKFKPIHRRKFGYE---VNEIAWNMTGEMFFLTTG 169
DV + + R F E ++AW+ G M + G
Sbjct: 171 YDVDSGECV--RTFTEERAAPRQLAWHPWGNMLAVALG 206
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 50/186 (26%), Positives = 88/186 (47%)
Query: 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
S E+ H K V SV ++ TG + + S D++A++W + V + + V
Sbjct: 95 SGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQF--VSSFAQQNNW--VRSA 150
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDE 131
+ P + L+ATAS DK+VR++D SG+C + E + + P G +AV +
Sbjct: 151 KFSP-NGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNR 209
Query: 132 LTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPM-GR--YFAV 187
+ I DV + + VN++A++ +G FL +G+ +D + GR Y
Sbjct: 210 IKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGH--FLLSGSDDRTIRILDLLEGRPIYTLT 267
Query: 188 GSADSL 193
G D++
Sbjct: 268 GHTDAV 273
Score = 123 (48.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 28/119 (23%), Positives = 59/119 (49%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R +TGH + + + G ++A+ S D T +W++ + I H+ V+ +
Sbjct: 12 RHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQ----AARCIRFASHSAPVNGVA 67
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDE 131
W PK +L+A+A D+TV++W+ + S + + + ++ + G H+ + DD+
Sbjct: 68 WSPK-GNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTG-HLMLTASDDK 124
Score = 113 (44.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 30/98 (30%), Positives = 46/98 (46%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASEDL 234
+ D G S D +W ++ V +F + W VR+ FS G +A+AS+D
Sbjct: 108 VDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNW-VRSAKFSPNGKLVATASDDK 166
Query: 235 FIDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYA 271
+ I +V +G V RAA + W+P N+LA A
Sbjct: 167 SVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVA 204
Score = 94 (38.1 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 24/101 (23%), Positives = 50/101 (49%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+A P G AV + + ++D+S ++ + PV ++F +G ++ S S+D
Sbjct: 192 LAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRT 251
Query: 236 IDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDK 275
I I ++ GR ++ + A+N+V ++ + A G D+
Sbjct: 252 IRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDR 292
Score = 89 (36.4 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 64 GHADSVDQLCWDPKHADLIATASGDKTVRLWDA-RSGKCSQQAELSGENINITYKPDGTH 122
GH+ + QL + P A IAT+S D TV LW+ ++ +C + A S + + P G
Sbjct: 16 GHSGGITQLRFGPDGAQ-IATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNL 74
Query: 123 IAVGNRDDELTILDVRKFKPIHRRKFGYE--VNEIAWNMTGEMFFLTTGN 170
+A D + I + K + + + V + ++ TG + LT +
Sbjct: 75 VASAGHDRTVKIWEP-KLRGVSGEFVAHSKAVRSVDFDSTGHLM-LTASD 122
Score = 42 (19.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 159 MTGEMFFLTTGNAGCY-CIAIDPMGRYFAVGSADSLVSLW 197
+ G + TG+ +A G FA G +D + +W
Sbjct: 258 LEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVW 297
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 148 (57.2 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 34/124 (27%), Positives = 65/124 (52%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R TGHK V+ AW+ + + S D+T +++ + K L+GH + V
Sbjct: 115 RTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKT----LKGHTNYVFCCN 170
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDEL 132
++P+ + L+ + S D++VR+WD R+G C + + ++ +++ DG+ I G+ D +
Sbjct: 171 FNPQ-SSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLV 229
Query: 133 TILD 136
I D
Sbjct: 230 RIWD 233
Score = 143 (55.4 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 45/164 (27%), Positives = 81/164 (49%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-VKDIELRGHADSVDQLCWDP 76
GH V +N + + SGS D++ R+W + G VK L H+D V + ++
Sbjct: 161 GHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRT---GMCVKT--LPAHSDPVSAVSFN- 214
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITY---KPDGTHIAVGNRDDELT 133
+ LI + S D VR+WD +G+C + + EN + + P+G +I N D+ L
Sbjct: 215 RDGSLITSGSYDGLVRIWDTANGQCVKTL-VDDENPPVAFVKFSPNGKYILSSNLDNTLK 273
Query: 134 ILDVRKFKPIHRRKFGYEVNEIA----WNMTGEMFFLTTGNAGC 173
+ D K K + + + G+E N+ +++TG + ++ G+ C
Sbjct: 274 LWDFGKGKTLKQYQ-GHENNKYCIFANFSVTGGKWIIS-GSEDC 315
Score = 131 (51.2 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 45/179 (25%), Positives = 86/179 (48%)
Query: 3 ESSIP---FKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKD 59
ES+IP +K + + E GH K + +V ++ G L + S D+T ++W++ +
Sbjct: 61 ESTIPGAGYKLISTIE--GHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERT-- 116
Query: 60 IELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINI---TY 116
L GH V+ W ++ TAS DKT+++++ + K ++ L G + +
Sbjct: 117 --LTGHKLGVNDFAWSADSKSIV-TASDDKTLKIYEVPTVKMAKT--LKGHTNYVFCCNF 171
Query: 117 KPDGTHIAVGNRDDELTILDVR-----KFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGN 170
P + + G+ D+ + I DVR K P H V+ +++N G + +T+G+
Sbjct: 172 NPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDP----VSAVSFNRDGSL--ITSGS 224
Score = 97 (39.2 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 24/69 (34%), Positives = 35/69 (50%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP-VRTISFSHTGDYIASASEDLFIDISN 240
G GS D LV +WD + CV+T E P V + FS G YI S++ D + + +
Sbjct: 217 GSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWD 276
Query: 241 VHTGRTVHQ 249
G+T+ Q
Sbjct: 277 FGKGKTLKQ 285
Score = 82 (33.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 26/98 (26%), Positives = 46/98 (46%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTI--SFSHTGD-YIASASE 232
+ P G+Y + D+ + LWD + ++ + E I +FS TG +I S SE
Sbjct: 254 VKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSE 313
Query: 233 DLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLA 269
D I + N+ T V + A+ + + +P N++A
Sbjct: 314 DCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIA 351
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 188 (71.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 63/225 (28%), Positives = 102/225 (45%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V ++++ TG LAS S D T ++W + G ++ + GH +V +
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ--GFECIRT--MHGHDHNVSSVA 199
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKP--DGTHIAVGNRDDE 131
P + D I +AS DKT+++W+ +G C + E + + +P DGT IA + D
Sbjct: 200 IMP-NGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV-RPNQDGTLIASSSNDQT 257
Query: 132 LTILDVR-KFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNA-GCYCIAIDPMGRYFAVGS 189
+ + V K R+ + V I+W E T A G G + GS
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISW--APESAHPTILEATGSETKKSGKPGPFLLSGS 315
Query: 190 ADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASED 233
D + +WD+S +C+ T + W VR + G YI S ++D
Sbjct: 316 RDKTIKMWDVSIGMCLMTLVGHDNW-VRGVLVHPGGKYIVSCADD 359
Score = 163 (62.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 62/232 (26%), Positives = 106/232 (45%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V SVA G + S S D+T ++W + G+ VK GH + V ++
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVAT-GYC-VKTFT--GHREWV-RMV 240
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENIN--ITYKPDGTHIAVGNRDD 130
+ LIA++S D+TVR+W + +C +AEL E++ I++ P+ H +
Sbjct: 241 RPNQDGTLIASSSNDQTVRVWVVATKEC--KAELREHEHVVECISWAPESAHPTIL---- 294
Query: 131 ELTILDVRKF-KPIHRRKFGYEVNEIA-WNMTGEMFFLT-TGNAGCYC-IAIDPMGRYFA 186
E T + +K KP G I W+++ M +T G+ + + P G+Y
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIV 354
Query: 187 VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
+ D + +WD C +T + E V ++ F T Y+ + S D + +
Sbjct: 355 SCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 150 (57.9 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 36/122 (29%), Positives = 62/122 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH+ V V ++ + + S S D T +VW H G + L+GH DSV + +D
Sbjct: 105 SGHRSPVTRVIFHPVFSVIVSASEDATIKVWD---HETGDFERT-LKGHTDSVQDISFDH 160
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
L+A+ S D T++LWD + +C + N++ + P+G HI +RD + +
Sbjct: 161 T-GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 136 DV 137
+V
Sbjct: 220 EV 221
Score = 114 (45.2 bits), Expect = 0.00065, P = 0.00065
Identities = 32/101 (31%), Positives = 47/101 (46%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
I+ D G+ A SAD + LWD C+RT + V +++ GD+I SAS D
Sbjct: 156 ISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 236 IDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 275
I + V TG V R + V N L+A + +D+
Sbjct: 216 IKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQ 256
Score = 108 (43.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 31/118 (26%), Positives = 53/118 (44%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRTISFSHTGDYIASASEDL 234
+AI P G + S D + +W+++ CV+TFT EW VR + + G IAS+S D
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREW-VRMVRPNQDGTLIASSSNDQ 256
Query: 235 FIDISNVHTGRTVHQI-PCRAAMNSVEWNPK--YNLLAYAGDDKNKYQADEGVFRIYG 289
+ + V T ++ + + W P+ + + A + K G F + G
Sbjct: 257 TVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSG 314
Score = 81 (33.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 23/93 (24%), Positives = 49/93 (52%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDG 120
L GH V ++ + P + +I +AS D T+++WD +G + + +++ +I++ G
Sbjct: 104 LSGHRSPVTRVIFHPVFS-VIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTG 162
Query: 121 THIAVGNRDDELTILDVRKFKPIHRRKFGYEVN 153
+A + D + + D + F+ I R G++ N
Sbjct: 163 KLLASCSADMTIKLWDFQGFECI-RTMHGHDHN 194
Score = 39 (18.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 184 YFAVGSADSLVSLWD 198
Y GS D V +W+
Sbjct: 394 YVVTGSVDQTVKVWE 408
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 176 (67.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 81/287 (28%), Positives = 125/287 (43%)
Query: 15 EYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
E+T GHK ++ VAW+ G AS D+ R+W + + K I GH ++ ++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLNGNTW-TTKTILSDGHKRTIREI 65
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG-ENI--NITYKPDGTHIAVGNRD 129
W P +A+AS D T +W SG+ A L G EN ++++ G +A +RD
Sbjct: 66 RWSPC-GQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
Query: 130 DELTILDVR---KFK-PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYF 185
+ I +V +F+ +V + W+ T E+ L + + Y D + F
Sbjct: 125 KSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKEL--LASAS---Y----DNTIKMF 175
Query: 186 AVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNV-HTG 244
A D+L S WD CV T + V +I F TG+ + S S+D + I H G
Sbjct: 176 A---EDALDSDWD-----CVATLSSHTSTVWSIDFDATGERLVSCSDDTSLKIWQAYHPG 227
Query: 245 ----------RTVHQIPCRA------AMNSVEWNPKYNLLAYA-GDD 274
+TV + C A+ V W NL+A A GDD
Sbjct: 228 NDAGVATPDKQTVWKCVCTISGQHSRAIYDVSWCKLTNLIATACGDD 274
Score = 44 (20.5 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 256 MNSVEWNP 263
+NSVEWNP
Sbjct: 306 VNSVEWNP 313
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 187 (70.9 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 62/225 (27%), Positives = 103/225 (45%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V ++++ TG LAS S D T ++W + G ++ + GH +V +
Sbjct: 144 RTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ--GFECIRT--MHGHDHNVSSVA 199
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKP--DGTHIAVGNRDDE 131
P + D I +AS DKT+++W+ +G C + E + + +P DGT +A + D
Sbjct: 200 IMP-NGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMV-RPNQDGTLLASCSNDQT 257
Query: 132 LTILDVR-KFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNA-GCYCIAIDPMGRYFAVGS 189
+ + V K R+ + V I+W E T A G G + GS
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISW--APESAHPTISEATGSENKKSGKPGPFLLSGS 315
Query: 190 ADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASED 233
D + +WDIS +C+ T + W VR + F G ++ S ++D
Sbjct: 316 RDKTIKMWDISTGMCLMTLVGHDNW-VRGVLFHPGGRFVVSCADD 359
Score = 154 (59.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 60/232 (25%), Positives = 104/232 (44%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V SVA G + S S D+T ++W + G+ VK GH + V ++
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVAT-GYC-VKTFT--GHREWV-RMV 240
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENIN--ITYKPDGTHIAVGNRDD 130
+ L+A+ S D+TVR+W + +C +AEL E++ I++ P+ H +
Sbjct: 241 RPNQDGTLLASCSNDQTVRVWVVATKEC--KAELREHEHVVECISWAPESAHPTIS---- 294
Query: 131 ELTILDVRKF-KPIHRRKFGYEVNEIA-WNMTGEMFFLT-TGNAGCYC-IAIDPMGRYFA 186
E T + +K KP G I W+++ M +T G+ + P GR+
Sbjct: 295 EATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVV 354
Query: 187 VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
+ D + +WD C++T + E V ++ F Y+ + S D + +
Sbjct: 355 SCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKV 406
Score = 152 (58.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 35/122 (28%), Positives = 62/122 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH+ V V ++ + + S S D T +VW E + L+GH DSV + +D
Sbjct: 105 SGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERT----LKGHTDSVQDISFD- 159
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
+ L+A+ S D T++LWD + +C + N++ + P+G HI +RD + +
Sbjct: 160 QTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMW 219
Query: 136 DV 137
+V
Sbjct: 220 EV 221
Score = 113 (44.8 bits), Expect = 0.00084, P = 0.00083
Identities = 32/101 (31%), Positives = 46/101 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
I+ D G+ A SAD + LWD C+RT + V +++ GD+I SAS D
Sbjct: 156 ISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 236 IDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 275
+ + V TG V R + V N LLA +D+
Sbjct: 216 MKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQ 256
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 184 YFAVGSADSLVSLWD 198
Y GS D V +W+
Sbjct: 394 YVVTGSVDQTVKVWE 408
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 185 (70.2 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 69/263 (26%), Positives = 126/263 (47%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V + +N G+ L S S D+T VW E G +VK L+GH V+ C+ +
Sbjct: 97 GHSGAVMELHYNTDGSLLFSASTDKTVCVWDSET-GE-RVK--RLKGHTSFVNS-CFPAR 151
Query: 78 HADLIA-TASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILD 136
+A T S D TV+LWD R + + + +++T+ I G D+++ + D
Sbjct: 152 RGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWD 211
Query: 137 VRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSL 196
+R+ K I+ + G+ + +++ + +L + N+ + + + R FA + V +
Sbjct: 212 LRQNKLIYSMQ-GHGDSVTGLSLSADGSYLLS-NSMDNSVRVWDI-RPFA--PKERCVKI 266
Query: 197 WDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRA-A 255
+ + V F K + S+S G IA+ S D F+ I + T R V+++P A +
Sbjct: 267 FQGN----VHNFEK---NLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGS 319
Query: 256 MNSVEWNPKYNLLAYAGDDKNKY 278
+N V ++P+ ++ DK Y
Sbjct: 320 VNEVAFHPEEPIVLSGSSDKRLY 342
Score = 141 (54.7 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 38/149 (25%), Positives = 79/149 (53%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
+GH+ +V+ ++ G LAS D+ +W++ +G ++ L+GH+ +V +L ++
Sbjct: 53 SGHEGEVYCCKFHPNGATLASSGYDRLILMWNV----YGDCENYATLKGHSGAVMELHYN 108
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPD-GTHIA-VGNRDDELT 133
L+ +AS DKTV +WD+ +G+ ++ + +N + G +A G+ D +
Sbjct: 109 TD-GSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVK 167
Query: 134 ILDVRKFKPIHRRKFGYEVNEIAWNMTGE 162
+ D+RK +H + Y+V + +N T +
Sbjct: 168 LWDIRKKASVHTFQNTYQVLSVTFNDTSD 196
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 190 (71.9 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 69/267 (25%), Positives = 108/267 (40%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + ++ WN G + S VD+T +W G+ + H+ + W
Sbjct: 450 HKGPIFALKWNKCGNYILSAGVDKTTIIWDAST---GQCTQ-QFAFHSAPALDVDWQTNQ 505
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGEN--IN-ITYKPDGTHIAVGNRDDELTIL 135
A A+ S D+ + + R G G +N I + P G +A + D L I
Sbjct: 506 A--FASCSTDQRIHV--CRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIW 561
Query: 136 DVRKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLV 194
+ + + H + E+ I W+ TG T N I A S DS V
Sbjct: 562 SMNRDRCCHDLQAHSKEIYTIKWSPTGP----GTNNPNTNLI--------LASASFDSTV 609
Query: 195 SLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRA 254
LWD+ C+ T TK PV +++FS G ++AS S D + I + TG+ VH
Sbjct: 610 RLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLVHSYKGTG 669
Query: 255 AMNSVEWNPKYNLLAYAGDDKNKYQAD 281
+ V WN K + + D + + D
Sbjct: 670 GIFEVCWNSKGTKVGASASDGSVFVLD 696
Score = 136 (52.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 38/133 (28%), Positives = 63/133 (47%)
Query: 19 HKKKVHSVAWNCTG--TK-------LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H K+++++ W+ TG T LAS S D T R+W +E G L H + V
Sbjct: 575 HSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVE---RGSCIHT-LTKHTEPV 630
Query: 70 DQLCWDP--KHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN 127
+ + P KH +A+ S DK V +W ++G+ + +G + + GT +
Sbjct: 631 YSVAFSPDGKH---LASGSFDKCVHIWSTQTGQLVHSYKGTGGIFEVCWNSKGTKVGASA 687
Query: 128 RDDELTILDVRKF 140
D + +LD+RKF
Sbjct: 688 SDGSVFVLDLRKF 700
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 61/273 (22%), Positives = 104/273 (38%)
Query: 3 ESSIPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL 62
+ +I +R GH+ +V AWN + LASGS D TAR+W + + + L
Sbjct: 338 DENIEIPESKARVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSD-ANTNSNQLVL 396
Query: 63 R-----GHAD-----SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI 112
R G A+ V L W+ L+AT S D R+W S + G
Sbjct: 397 RHCIQKGGAEVPSNKDVTSLDWNCD-GSLLATGSYDGYARIWKTDGRLASTLGQHKGPIF 455
Query: 113 NITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNA 171
+ + G +I D I D + + F ++ W T + F A
Sbjct: 456 ALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQ-TNQAF------A 508
Query: 172 GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASAS 231
C S D + + + ++TF V I + G +AS S
Sbjct: 509 SC---------------STDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCS 553
Query: 232 EDLFIDISNVHTGRTVHQIPCRAA-MNSVEWNP 263
+D+ + I +++ R H + + + +++W+P
Sbjct: 554 DDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSP 586
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 142 (55.0 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 39/128 (30%), Positives = 65/128 (50%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V V+W+ G +A+GS+D T R+W +P G+ LRGH+ + L W+P
Sbjct: 184 GHYNWVLCVSWSPDGEVIATGSMDNTIRLW--DPKS-GQCLGDALRGHSKWITSLSWEPI 240
Query: 78 HA------DLIATASGDKTVRLWDARSGKCSQQAELSGENINIT-YKPDGTHIAV-GNRD 129
H +A++S D T+++WD S C Q +SG +++ K G + G+ D
Sbjct: 241 HLVKPGSKPRLASSSKDGTIKIWDTVSRVC--QYTMSGHTNSVSCVKWGGQGLLYSGSHD 298
Query: 130 DELTILDV 137
+ + D+
Sbjct: 299 RTVRVWDI 306
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 37/116 (31%), Positives = 57/116 (49%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
TGH+K V+ VA++ G + S S D + ++W GK RGH SV Q+ W
Sbjct: 399 TGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRD---GKFIST-FRGHVASVYQVAWS- 453
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSG---ENINITYKPDGTHIAVGNRD 129
L+ + S D T+++WD R+ K S +L G E + + DG + G +D
Sbjct: 454 SDCRLLVSCSKDTTLKVWDVRTRKLS--VDLPGHKDEVYTVDWSVDGKRVCSGGKD 507
Score = 134 (52.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 54/197 (27%), Positives = 90/197 (45%)
Query: 31 TGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKT 90
T +++ +G+ D TAR+W + + L+GH + V + W P ++IAT S D T
Sbjct: 155 TSSRMVTGAGDNTARIWDCDT----QTPMHTLKGHYNWVLCVSWSPD-GEVIATGSMDNT 209
Query: 91 VRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK 147
+RLWD +SG+C A L G + +++++P H+ L K I K
Sbjct: 210 IRLWDPKSGQCLGDA-LRGHSKWITSLSWEP--IHLVKPGSKPRLA--SSSKDGTI---K 261
Query: 148 FGYEVNEIA-WNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDI-SEMLCV 205
V+ + + M+G T + C + G ++ GS D V +WDI S+ C+
Sbjct: 262 IWDTVSRVCQYTMSGH-----TNSVSC--VKWGGQGLLYS-GSHDRTVRVWDINSQGRCI 313
Query: 206 RTF-TKLEWPVRTISFS 221
+ W V +S S
Sbjct: 314 NILKSHAHW-VNHLSLS 329
Score = 91 (37.1 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 25/101 (24%), Positives = 46/101 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+A P GRY S D+ + LWD + + TF V +++S + S S+D
Sbjct: 408 VAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTT 467
Query: 236 IDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 275
+ + +V T + +P + + +V+W+ + G DK
Sbjct: 468 LKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDK 508
Score = 60 (26.2 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 23/88 (26%), Positives = 37/88 (42%)
Query: 189 SADSLVSLWD-ISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTV 247
S D + LW+ + + T + V ++FS G YI SAS D I + + G+ +
Sbjct: 378 SDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFI 437
Query: 248 HQIPCR-AAMNSVEWNPKYNLLAYAGDD 274
A++ V W+ LL D
Sbjct: 438 STFRGHVASVYQVAWSSDCRLLVSCSKD 465
Score = 42 (19.8 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 17/75 (22%), Positives = 31/75 (41%)
Query: 165 FLTT--GN-AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFS 221
F++T G+ A Y +A R S D+ + +WD+ + V T+ +S
Sbjct: 436 FISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWS 495
Query: 222 HTGDYIASASEDLFI 236
G + S +D +
Sbjct: 496 VDGKRVCSGGKDKMV 510
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 188 (71.2 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 69/255 (27%), Positives = 112/255 (43%)
Query: 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLI 82
+ SV ++ G LA+G+ D+T +VW I H K GH + L + I
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDI----HTKKIQHTFYGHELDIYSLDYS-SDGRFI 384
Query: 83 ATASGDKTVRLWDARSGKCS---QQAELSGEN--INITYKPDGTHIAVGNRDDELTILDV 137
+ SGDK ++WD GKC+ E+ +N ++ PDG +A G+ D+ + + D
Sbjct: 385 VSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDA 444
Query: 138 RKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLW 197
+ + R YE G + Y +A P G+ A GS D + LW
Sbjct: 445 QTGYFLER----YE---------GHL-------DSVYSVAFSPDGKSLASGSLDKSLKLW 484
Query: 198 DIS----EMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQI--P 251
D+S C TF + V +++FS G ++ S S+D + + G T H +
Sbjct: 485 DLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNG-TTHMMLQG 543
Query: 252 CRAAMNSVEWNPKYN 266
+ ++ SV +PK N
Sbjct: 544 HKNSVISVALSPKNN 558
Score = 156 (60.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 49/201 (24%), Positives = 92/201 (45%)
Query: 3 ESSIPFKNLHSRE----YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK 58
+ ++ ++H+++ + GH+ ++S+ ++ G + SGS D+ A++W IE
Sbjct: 348 DKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTL 407
Query: 59 DIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYK 117
E G + V + P L+A S D VRLWDA++G ++ E +++ ++ +
Sbjct: 408 GNEEVGPKNGVTSVAMSPD-GRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFS 466
Query: 118 PDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIA 177
PDG +A G+ D L + D+ + R + + G F+ + +A
Sbjct: 467 PDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFN---------GHKDFVLS-------VA 510
Query: 178 IDPMGRYFAVGSADSLVSLWD 198
P G + GS D V WD
Sbjct: 511 FSPDGSWLISGSKDRSVQFWD 531
Score = 154 (59.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 65/245 (26%), Positives = 109/245 (44%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADS---VDQLCWD 75
H V V ++ G LA+G +++A+++ ++ G KV D + +C+
Sbjct: 280 HNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDT-GK-KVHAFVDESEKDGDLYIRSVCFS 336
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINI---TYKPDGTHIAVGNRDDEL 132
P + +AT + DKTV++WD + K Q G ++I Y DG I G+ D +
Sbjct: 337 PD-GNYLATGAEDKTVKVWDIHTKKI--QHTFYGHELDIYSLDYSSDGRFIVSGSGDKKA 393
Query: 133 TILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADS 192
I D+ K K A+ + E + N G +A+ P GR A GS D+
Sbjct: 394 KIWDIEKGK-------------CAFTLGNEE--VGPKN-GVTSVAMSPDGRLVAAGSLDN 437
Query: 193 LVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC 252
+V LWD + + V +++FS G +AS S D + + ++ R+ + C
Sbjct: 438 IVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSR--C 495
Query: 253 RAAMN 257
RA N
Sbjct: 496 RATFN 500
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 35/118 (29%), Positives = 59/118 (50%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75
Y GH V+SVA++ G LASGS+D++ ++W + GH D V + +
Sbjct: 453 YEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFS 512
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN-INITYKP-DGTH--IAVGNRD 129
P + LI+ S D++V+ WD R+G + + I++ P + +H A G+ D
Sbjct: 513 PDGSWLIS-GSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGD 569
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 144 (55.7 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 36/110 (32%), Positives = 57/110 (51%)
Query: 11 LHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVD 70
LH+ + GH V +V+++ G +A+GS+D T R+W + G+ L+GH +
Sbjct: 184 LHTLK--GHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKK---GQALGAPLKGHVKWIT 238
Query: 71 QLCWDPKHADL-----IATASGDKTVRLWDARSGKCSQQAELSGENINIT 115
L W+P H +A+AS D TVR+WD S + LSG ++T
Sbjct: 239 SLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRAD--IVLSGHKGSVT 286
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 36/120 (30%), Positives = 63/120 (52%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH+K+V+ V ++ +AS D ++W+ GK LRGH +V Q C+
Sbjct: 403 GHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRD---GKFITT-LRGHVGAVYQCCFSAD 458
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSG---ENINITYKPDGTHIAVGNRDDELTI 134
+ L+ ++S D T+++W+ R+GK S+ +L G E + + PDG + G +D + I
Sbjct: 459 -SRLLVSSSKDTTLKVWNVRTGKLSE--DLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRI 515
Score = 135 (52.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 48/198 (24%), Positives = 85/198 (42%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKP 118
+ GH +++ + P + + + SGD T R+WD +G + L G + ++Y P
Sbjct: 144 IAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTG--TPLHTLKGHTSWVLAVSYSP 201
Query: 119 DGTHIAVGNRDDELTILDVRKFKPIHRRKFGYE--VNEIAWNMTGEMFFLTTGNAGCYCI 176
+G IA G+ D+ + I D +K + + G+ + +AW E + L +G
Sbjct: 202 NGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAW----EPYHLQ--QSG---- 251
Query: 177 AIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFI 236
P A S DS V +WD+ + + V + + TG I ++S D I
Sbjct: 252 --HPR---LASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGK-IYTSSHDRTI 305
Query: 237 DISNVHTGRTVHQIPCRA 254
+ N TG + + A
Sbjct: 306 KVWNSQTGTLIQTLSAHA 323
Score = 125 (49.1 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 48/163 (29%), Positives = 77/163 (47%)
Query: 13 SREYTGHKKKVHSVAWN-CTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQ 71
S GH + + + +++ + + + SGS D TAR+W + G L+GH V
Sbjct: 141 SASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDT---GTPLHT-LKGHTSWVLA 196
Query: 72 LCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT---YKP----DGTH-- 122
+ + P A +IAT S D TVR+WDA+ G+ + A L G IT ++P H
Sbjct: 197 VSYSPNGA-MIATGSMDNTVRIWDAKKGQ-ALGAPLKGHVKWITSLAWEPYHLQQSGHPR 254
Query: 123 IAVGNRDDELTILDV-RKFKPIHRRKFGYEVNEIAWNMTGEMF 164
+A ++D + I DV K I V + W TG+++
Sbjct: 255 LASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIY 297
Score = 118 (46.6 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 33/102 (32%), Positives = 50/102 (49%)
Query: 18 GHKKKVHSVAWNC-----TG-TKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQ 71
GH K + S+AW +G +LAS S D T R+W + K DI L GH SV
Sbjct: 232 GHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVI----SKRADIVLSGHKGSVTC 287
Query: 72 LCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN 113
+ W I T+S D+T+++W++++G Q +N
Sbjct: 288 VRWGG--TGKIYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVN 327
Score = 88 (36.0 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 25/101 (24%), Positives = 43/101 (42%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+ P Y A D+ V LW+ + + T V FS + S+S+D
Sbjct: 411 VTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTT 470
Query: 236 IDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 275
+ + NV TG+ +P + + +V+W+P + G DK
Sbjct: 471 LKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDK 511
Score = 47 (21.6 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 189 SADSLVSLWDI-SEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTV 247
S D + LWD S V + V ++FS YIASA D + + N G+ +
Sbjct: 381 SDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFI 440
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 186 (70.5 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 49/173 (28%), Positives = 86/173 (49%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+ + GH +V+++ W+ TG LAS S D T ++W ++ V D L+ H+ + +
Sbjct: 339 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTC--VHD--LQAHSKEIYTIK 394
Query: 74 WDPK-------HADLIA--TASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHI 123
W P +A+L+ +AS D TVRLWDA G C E + ++ + PDG H+
Sbjct: 395 WSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSPDGRHL 454
Query: 124 AVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCI 176
A G+ D + I + + ++ + + E+ WN TG+ + + G C+
Sbjct: 455 ASGSFDKCVHIWNTQSGALVNSYRGTGGIFEVCWNSTGDKVGASASD-GSVCV 506
Score = 173 (66.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 61/246 (24%), Positives = 104/246 (42%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
HK + ++ WN G + S VD+T +W + H G+ K + H+ + W +
Sbjct: 261 HKGPIFALKWNKKGNFILSAGVDKTTIIW--DAHT-GEAKQ-QFPFHSAPALDVDWQSNN 316
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILDV 137
A+ S D + + + + + +N I + P G +A + D L + +
Sbjct: 317 T--FASCSTDMCIHVCKLGQERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSM 374
Query: 138 RKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSL 196
++ +H + E+ I W+ TG T N + + R S DS V L
Sbjct: 375 KQDTCVHDLQAHSKEIYTIKWSPTGP----GTNNPNANLM----LARS---ASFDSTVRL 423
Query: 197 WDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAM 256
WD C+ T TK + PV +++FS G ++AS S D + I N +G V+ +
Sbjct: 424 WDAERGACIHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIWNTQSGALVNSYRGTGGI 483
Query: 257 NSVEWN 262
V WN
Sbjct: 484 FEVCWN 489
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 59/258 (22%), Positives = 99/258 (38%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-----GHAD----- 67
GH+ +V AWN LASGS D TAR+W++ G + LR G D
Sbjct: 163 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQDVPSNK 222
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN 127
V L W+ + L+AT S D R+W S + G + + G I
Sbjct: 223 DVTSLDWNSE-GTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAG 281
Query: 128 RDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFA 186
D I D + + F ++ W + N FA
Sbjct: 282 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ---------SNNT-------------FA 319
Query: 187 VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
S D + + + + ++TF V I + TG+ +AS S+D+ + + ++
Sbjct: 320 SCSTDMCIHVCKLGQERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTC 379
Query: 247 VHQIPCRAA-MNSVEWNP 263
VH + + + +++W+P
Sbjct: 380 VHDLQAHSKEIYTIKWSP 397
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/219 (22%), Positives = 84/219 (38%)
Query: 58 KDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYK 117
K + LRGH V W+P +DL+A+ SGD T R+W+ +L + +
Sbjct: 157 KAMVLRGHESEVFICAWNPV-SDLLASGSGDSTARIWNLSESSTGGSTQLV---LRHCIR 212
Query: 118 PDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAG-CYCI 176
G + N+D +T LD + Y+ W G + + G + +
Sbjct: 213 EGGQDVP-SNKD--VTSLDWNSEGTLLATG-SYDGFARIWTKDGNLASTLGQHKGPIFAL 268
Query: 177 AIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFI 236
+ G + D +WD + F P + + + AS S D+ I
Sbjct: 269 KWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCI 327
Query: 237 DISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDD 274
+ + R + +N+++W+P NLLA DD
Sbjct: 328 HVCKLGQERPIKTFQGHTNEVNAIKWDPTGNLLASCSDD 366
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 152 (58.6 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 2 GESSIPFKNLHSR--EYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKV 57
G++++ F +L + +T GH+ V S++W+ G KLASG + +W +P GK
Sbjct: 134 GDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLW--DP-STGKQ 190
Query: 58 KDIELRGHADSVDQLCWDPKHAD----LIATASGDKTVRLWDARSGKCSQQAELSGENIN 113
L GH+ + L W+P HA+ +A++S D +VR+WD +G+C + L+G +
Sbjct: 191 VGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERI--LTGHTQS 248
Query: 114 IT 115
+T
Sbjct: 249 VT 250
Score = 143 (55.4 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 64/252 (25%), Positives = 104/252 (41%)
Query: 32 GTKLASGSVDQTARVWHI--EPHGHGKVKDI-----ELRGHADSVDQLCWDPKHADLIAT 84
G L S +V+ T +V I +P +V+ + L GH+++V + + P +A+
Sbjct: 74 GKTLESQAVE-TEKVLDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPT-GKYLAS 131
Query: 85 ASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDVRKFK 141
SGD TVR WD + + G ++I++ PDG +A G ++ ++ + D K
Sbjct: 132 GSGDTTVRFWDLSTE--TPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGK 189
Query: 142 PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISE 201
+ R G+ W +T + N C RY A S D V +WD +
Sbjct: 190 QVGRALAGHS----KW-ITALSWEPLHANPEC---------RYVASSSKDGSVRVWDTTA 235
Query: 202 MLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEW 261
C R T V + + G + SAS+D I + H G + CR W
Sbjct: 236 GRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDG-----VLCRTLQGHGHW 289
Query: 262 NPKYNLLAYAGD 273
N +A + D
Sbjct: 290 ---VNTMALSTD 298
Score = 142 (55.0 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 37/121 (30%), Positives = 63/121 (52%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
TGH+ ++ V ++ +AS S D++ ++W GK LRGH +V Q+ W
Sbjct: 369 TGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT---GKYL-ASLRGHVAAVYQIAWSA 424
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSG---ENINITYKPDGTHIAVGNRDDELT 133
+ L+ + S D T+++WD ++ K + A+L G E + + PDG +A G +D L
Sbjct: 425 D-SRLLVSGSSDSTLKVWDVKAQKLA--ADLPGHADEVYAVDWSPDGQRVASGGKDKCLR 481
Query: 134 I 134
I
Sbjct: 482 I 482
Score = 125 (49.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V+ +AW+ L SGS D T +VW ++ K+ +L GHAD V + W P
Sbjct: 412 GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ---KLA-ADLPGHADEVYAVDWSPD 467
Query: 78 HADLIATASGDKTVRLW 94
+A+ DK +R+W
Sbjct: 468 -GQRVASGGKDKCLRIW 483
Score = 123 (48.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 41/134 (30%), Positives = 65/134 (48%)
Query: 34 KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRL 93
+L SGS D T +W P K + GH ++Q+ + P + +IA+AS DK+++L
Sbjct: 343 RLVSGSDDFTLFLW--SP-AEDKKPLARMTGHQALINQVLFSPD-SRIIASASFDKSIKL 398
Query: 94 WDARSGKCSQQAELSGENI---NITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY 150
WD R+GK A L G I + D + G+ D L + DV+ K + G+
Sbjct: 399 WDGRTGK--YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK-LAADLPGH 455
Query: 151 --EVNEIAWNMTGE 162
EV + W+ G+
Sbjct: 456 ADEVYAVDWSPDGQ 469
Score = 117 (46.2 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 41/129 (31%), Positives = 60/129 (46%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH + V SVA++ TG LASGS D T R W + + +GH V + W P
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST----ETPHFTCQGHRHWVLSISWSPD 167
Query: 78 HADLIATASGDKT--VRLWDARSGKCSQQAELSGENINITY--------KPDGTHIAVGN 127
L ASG K + LWD +GK +A L+G + IT P+ ++A +
Sbjct: 168 GKKL---ASGCKNGQILLWDPSTGKQVGRA-LAGHSKWITALSWEPLHANPECRYVASSS 223
Query: 128 RDDELTILD 136
+D + + D
Sbjct: 224 KDGSVRVWD 232
Score = 75 (31.5 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 24/101 (23%), Positives = 41/101 (40%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+ P R A S D + LWD + + V I++S + S S D
Sbjct: 378 VLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDST 437
Query: 236 IDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDK 275
+ + +V + +P A + +V+W+P +A G DK
Sbjct: 438 LKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDK 478
Score = 68 (29.0 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 21/79 (26%), Positives = 32/79 (40%)
Query: 157 WN-MTGEMFFLTTGN-AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+ TG+ G+ A Y IA R GS+DS + +WD+
Sbjct: 399 WDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADE 458
Query: 215 VRTISFSHTGDYIASASED 233
V + +S G +AS +D
Sbjct: 459 VYAVDWSPDGQRVASGGKD 477
Score = 61 (26.5 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 24/89 (26%), Positives = 38/89 (42%)
Query: 188 GSADSLVSLWDISE-MLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
GS D + LW +E + T + + + FS IASAS D I + + TG+
Sbjct: 347 GSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKY 406
Query: 247 VHQIPCR-AAMNSVEWNPKYNLLAYAGDD 274
+ + AA+ + W+ LL D
Sbjct: 407 LASLRGHVAAVYQIAWSADSRLLVSGSSD 435
Score = 38 (18.4 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 174 YCIAIDPMGRYFAVGSADSLVSLW 197
Y + P G+ A G D + +W
Sbjct: 460 YAVDWSPDGQRVASGGKDKCLRIW 483
Score = 37 (18.1 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 253 RAAMNSVEWNPKYNLLAYAGDDKN 276
+A +N V ++P ++A A DK+
Sbjct: 372 QALINQVLFSPDSRIIASASFDKS 395
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 150 (57.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 39/138 (28%), Positives = 69/138 (50%)
Query: 4 SSIPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIE-PHGHGKVKDIEL 62
S+ + +H Y GH + +AW+ S S D T R+W P+ KV L
Sbjct: 71 SATNYSLIH--RYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKV----L 124
Query: 63 RGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGT 121
RGH + V + ++P ++LI + S D+T+R+W+ ++GKC + + I+ + + DG+
Sbjct: 125 RGHTNFVFCVNFNPP-SNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGS 183
Query: 122 HIAVGNRDDELTILDVRK 139
I + D I D ++
Sbjct: 184 LIVSASHDGSCKIWDAKE 201
Score = 145 (56.1 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 44/172 (25%), Positives = 78/172 (45%)
Query: 7 PFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHA 66
P+++L + E GH + V ++ G LAS SVD+T +W + + E GH+
Sbjct: 32 PYRHLKTLE--GHTAAISCVKFSNDGNLLASASVDKTMILWSAT--NYSLIHRYE--GHS 85
Query: 67 DSVDQLCWDPKHADLIATASGDKTVRLWDARSG-KCSQQAELSGEN---INITYKPDGTH 122
+ L W + +AS D T+R+WDARS +C + L G + + P
Sbjct: 86 SGISDLAWS-SDSHYTCSASDDCTLRIWDARSPYECLKV--LRGHTNFVFCVNFNPPSNL 142
Query: 123 IAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGNAGC 173
I G+ D+ + I +V+ K + K ++ + +N G + + + C
Sbjct: 143 IVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSC 194
Score = 136 (52.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 46/186 (24%), Positives = 86/186 (46%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V V +N + SGS D+T R+W ++ GK + ++ H+ + + ++ +
Sbjct: 126 GHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKT---GKCVRM-IKAHSMPISSVHFN-R 180
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQA-ELSGENINIT-YKPDGTHIAVGNRDDELTIL 135
LI +AS D + ++WDA+ G C + + ++ + P+G I V D L +
Sbjct: 181 DGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLS 240
Query: 136 DVR--KFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSL 193
+ KF ++ G+ T ++F +T+ + + G+Y GS D+
Sbjct: 241 NYATGKFLKVYT---GH---------TNKVFCITSA----FSVT---NGKYIVSGSEDNC 281
Query: 194 VSLWDI 199
V LWD+
Sbjct: 282 VYLWDL 287
Score = 77 (32.2 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP-VRTISFSHTGDYIASASEDLFIDISN 240
G S D +WD E C++T + P V FS G +I A+ D + +SN
Sbjct: 182 GSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSN 241
Query: 241 VHTGR 245
TG+
Sbjct: 242 YATGK 246
Score = 67 (28.6 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 26/102 (25%), Positives = 50/102 (49%)
Query: 180 PMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTIS--FSHT-GDYIASASEDLFI 236
P G++ V + DS + L + + ++ +T V I+ FS T G YI S SED +
Sbjct: 223 PNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCV 282
Query: 237 DISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKNK 277
+ ++ + ++ A+ SV +P N ++ +G+ +K
Sbjct: 283 YLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDK 324
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 163 (62.4 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 40/102 (39%), Positives = 60/102 (58%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R +TGH+ V S++++ G LAS DQ ++W + G + ELRGH DS+ L
Sbjct: 16 RLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDL---ASGTLFK-ELRGHTDSITSLA 71
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINI 114
+ P + LIA+AS D +VR+WD RS C+ A+ SGE + +
Sbjct: 72 FSPD-SGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGV 112
Score = 106 (42.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 191 DSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQI 250
D V LW + VR FT PV ++SFS G Y+ASA ED + + ++ +G ++
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 60
Query: 251 PCRA-AMNSVEWNPKYNLLAYAGDDKN 276
++ S+ ++P L+A A D +
Sbjct: 61 RGHTDSITSLAFSPDSGLIASASMDNS 87
Score = 101 (40.6 bits), Expect = 0.00041, P = 0.00041
Identities = 29/101 (28%), Positives = 49/101 (48%)
Query: 41 DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK 100
D+T R+W + ++ GH V L + P + +A+A D+ ++LWD SG
Sbjct: 1 DKTVRLWSAQQGNSVRL----FTGHRGPVLSLSFSP-NGKYLASAGEDQRLKLWDLASGT 55
Query: 101 CSQQAELSGENINIT---YKPDGTHIAVGNRDDELTILDVR 138
+ EL G +IT + PD IA + D+ + + D+R
Sbjct: 56 LFK--ELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIR 94
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 152 (58.6 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 2 GESSIPFKNLHSR--EYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKV 57
G++++ F +L + +T GH+ V S++W+ G KLASG + +W +P GK
Sbjct: 134 GDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLW--DP-STGKQ 190
Query: 58 KDIELRGHADSVDQLCWDPKHAD----LIATASGDKTVRLWDARSGKCSQQAELSGENIN 113
L GH+ + L W+P HA+ +A++S D +VR+WD +G+C + L+G +
Sbjct: 191 VGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERI--LTGHTQS 248
Query: 114 IT 115
+T
Sbjct: 249 VT 250
Score = 150 (57.9 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 65/252 (25%), Positives = 105/252 (41%)
Query: 32 GTKLASGSVDQTARVWHI--EPHGHGKVKDI-----ELRGHADSVDQLCWDPKHADLIAT 84
G L S +V+ T +V I +P +V+ + L GH+++V + + P +A+
Sbjct: 74 GKTLESQAVE-TEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPT-GKYLAS 131
Query: 85 ASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDVRKFK 141
SGD TVR WD + + G ++I++ PDG +A G ++ ++ + D K
Sbjct: 132 GSGDTTVRFWDLSTE--TPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGK 189
Query: 142 PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISE 201
+ R G+ W +TG + N C RY A S D V +WD +
Sbjct: 190 QVGRTLAGHS----KW-ITGLSWEPLHANPEC---------RYVASSSKDGSVRIWDTTA 235
Query: 202 MLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEW 261
C R T V + + G + SAS+D I + H G + CR W
Sbjct: 236 GRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDG-----VLCRTLQGHGHW 289
Query: 262 NPKYNLLAYAGD 273
N +A + D
Sbjct: 290 ---VNTMALSTD 298
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 33/119 (27%), Positives = 60/119 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
TGH+ ++ V ++ +AS S D++ ++W GK LRGH +V Q+ W
Sbjct: 369 TGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT---GKYL-ASLRGHVAAVYQIAWSA 424
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTI 134
+ L+ + S D T+++WD ++ K + + + + + PDG +A G +D L I
Sbjct: 425 D-SRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRI 482
Score = 127 (49.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V+ +AW+ L SGS D T +VW ++ K+ ++L GHAD V + W P
Sbjct: 412 GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ---KLA-MDLPGHADEVYAVDWSPD 467
Query: 78 HADLIATASGDKTVRLW 94
+A+ DK +R+W
Sbjct: 468 -GQRVASGGKDKCLRIW 483
Score = 123 (48.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 39/133 (29%), Positives = 63/133 (47%)
Query: 34 KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRL 93
+L SGS D T +W P K + GH ++Q+ + P + ++A+AS DK+++L
Sbjct: 343 RLVSGSDDFTLFLW--SP-AEDKKPLTRMTGHQALINQVLFSPD-SRIVASASFDKSIKL 398
Query: 94 WDARSGKCSQQAELSGENI---NITYKPDGTHIAVGNRDDELTILDVRKFK-PIHRRKFG 149
WD R+GK A L G I + D + G+ D L + DV+ K +
Sbjct: 399 WDGRTGK--YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHA 456
Query: 150 YEVNEIAWNMTGE 162
EV + W+ G+
Sbjct: 457 DEVYAVDWSPDGQ 469
Score = 115 (45.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 41/129 (31%), Positives = 59/129 (45%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH + V SVA++ TG LASGS D T R W + + +GH V + W P
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST----ETPHFTCKGHRHWVLSISWSPD 167
Query: 78 HADLIATASGDKT--VRLWDARSGKCSQQAELSGENINIT--------YKPDGTHIAVGN 127
L ASG K + LWD +GK + L+G + IT P+ ++A +
Sbjct: 168 GRKL---ASGCKNGQILLWDPSTGKQVGRT-LAGHSKWITGLSWEPLHANPECRYVASSS 223
Query: 128 RDDELTILD 136
+D + I D
Sbjct: 224 KDGSVRIWD 232
Score = 74 (31.1 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 24/101 (23%), Positives = 41/101 (40%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+ P R A S D + LWD + + V I++S + S S D
Sbjct: 378 VLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDST 437
Query: 236 IDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDK 275
+ + +V + +P A + +V+W+P +A G DK
Sbjct: 438 LKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDK 478
Score = 68 (29.0 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 21/79 (26%), Positives = 32/79 (40%)
Query: 157 WN-MTGEMFFLTTGN-AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+ TG+ G+ A Y IA R GS+DS + +WD+
Sbjct: 399 WDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADE 458
Query: 215 VRTISFSHTGDYIASASED 233
V + +S G +AS +D
Sbjct: 459 VYAVDWSPDGQRVASGGKD 477
Score = 60 (26.2 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 24/89 (26%), Positives = 38/89 (42%)
Query: 188 GSADSLVSLWDISEMLCVRT-FTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
GS D + LW +E T T + + + FS +ASAS D I + + TG+
Sbjct: 347 GSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKY 406
Query: 247 VHQIPCR-AAMNSVEWNPKYNLLAYAGDD 274
+ + AA+ + W+ LL D
Sbjct: 407 LASLRGHVAAVYQIAWSADSRLLVSGSSD 435
Score = 40 (19.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 157 WNMTGEMFFLTT-GNAG-CYCIAIDPMGRYFAVGSADSLVSLW 197
W++ + + G+A Y + P G+ A G D + +W
Sbjct: 441 WDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 40 (19.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 25/93 (26%), Positives = 40/93 (43%)
Query: 186 AVGSADSLVSLWDISEMLCVR-TFTKLEWPVRTISFSHTGD-YIASASEDLFIDISNVHT 243
+V D SL ++ E R + + P R +S S ++ S +ED T
Sbjct: 312 SVNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAED-----KKPLT 366
Query: 244 GRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKN 276
T HQ A +N V ++P ++A A DK+
Sbjct: 367 RMTGHQ----ALINQVLFSPDSRIVASASFDKS 395
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 152 (58.6 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 2 GESSIPFKNLHSR--EYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKV 57
G++++ F +L + +T GH+ V S++W+ G KLASG + +W +P GK
Sbjct: 135 GDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLW--DP-STGKQ 191
Query: 58 KDIELRGHADSVDQLCWDPKHAD----LIATASGDKTVRLWDARSGKCSQQAELSGENIN 113
L GH+ + L W+P HA+ +A++S D +VR+WD +G+C + L+G +
Sbjct: 192 VGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERT--LTGHAQS 249
Query: 114 IT 115
+T
Sbjct: 250 VT 251
Score = 149 (57.5 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 65/252 (25%), Positives = 105/252 (41%)
Query: 32 GTKLASGSVDQTARVWHI--EPHGHGKVKDI-----ELRGHADSVDQLCWDPKHADLIAT 84
G L S +V+ T +V I +P +V+ + L GH+++V + + P +A+
Sbjct: 75 GRTLESQAVE-TEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPT-GKYLAS 132
Query: 85 ASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDVRKFK 141
SGD TVR WD + + G ++I++ PDG +A G ++ ++ + D K
Sbjct: 133 GSGDTTVRFWDLSTE--TPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGK 190
Query: 142 PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISE 201
+ R G+ W +T + N C RY A S D V +WD +
Sbjct: 191 QVGRALTGHS----KW-ITALSWEPLHANPEC---------RYVASSSKDGSVRVWDTTA 236
Query: 202 MLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEW 261
C RT T V + + G + SAS+D I + H G + CR W
Sbjct: 237 GRCERTLTGHAQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDG-----VLCRTLQGHGHW 290
Query: 262 NPKYNLLAYAGD 273
N +A + D
Sbjct: 291 ---VNTMALSTD 299
Score = 143 (55.4 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 34/119 (28%), Positives = 60/119 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
TGH+ ++ V ++ +AS S D++ ++W GK LRGH +V Q+ W
Sbjct: 370 TGHQALINQVVFSPDSRVIASASFDKSIKLWDGRT---GKYL-ASLRGHVAAVYQIAWSA 425
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTI 134
+ L+ + S D T+++WD ++ K S + + + + PDG +A G +D L I
Sbjct: 426 D-SRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRI 483
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V+ +AW+ L SGS D T +VW ++ K+ +L GHAD V + W P
Sbjct: 413 GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ---KLST-DLPGHADEVYAVDWSPD 468
Query: 78 HADLIATASGDKTVRLW 94
+A+ DK +R+W
Sbjct: 469 -GQRVASGGKDKCLRIW 484
Score = 123 (48.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 41/134 (30%), Positives = 65/134 (48%)
Query: 34 KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRL 93
+L SGS D T +W P K + GH ++Q+ + P + +IA+AS DK+++L
Sbjct: 344 RLVSGSDDFTLFLW--SP-AEDKKPLARMTGHQALINQVVFSPD-SRVIASASFDKSIKL 399
Query: 94 WDARSGKCSQQAELSGENI---NITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY 150
WD R+GK A L G I + D + G+ D L + DV+ K + G+
Sbjct: 400 WDGRTGK--YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK-LSTDLPGH 456
Query: 151 --EVNEIAWNMTGE 162
EV + W+ G+
Sbjct: 457 ADEVYAVDWSPDGQ 470
Score = 117 (46.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 41/129 (31%), Positives = 60/129 (46%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH + V SVA++ TG LASGS D T R W + + +GH V + W P
Sbjct: 113 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST----ETPHFTCQGHRHWVLSISWSPD 168
Query: 78 HADLIATASGDKT--VRLWDARSGKCSQQAELSGENINITY--------KPDGTHIAVGN 127
L ASG K + LWD +GK +A L+G + IT P+ ++A +
Sbjct: 169 GKKL---ASGCKNGQILLWDPSTGKQVGRA-LTGHSKWITALSWEPLHANPECRYVASSS 224
Query: 128 RDDELTILD 136
+D + + D
Sbjct: 225 KDGSVRVWD 233
Score = 74 (31.1 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 24/101 (23%), Positives = 41/101 (40%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+ P R A S D + LWD + + V I++S + S S D
Sbjct: 379 VVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDST 438
Query: 236 IDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDK 275
+ + +V + +P A + +V+W+P +A G DK
Sbjct: 439 LKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDK 479
Score = 66 (28.3 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 21/79 (26%), Positives = 32/79 (40%)
Query: 157 WN-MTGEMFFLTTGN-AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+ TG+ G+ A Y IA R GS+DS + +WD+
Sbjct: 400 WDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADE 459
Query: 215 VRTISFSHTGDYIASASED 233
V + +S G +AS +D
Sbjct: 460 VYAVDWSPDGQRVASGGKD 478
Score = 61 (26.5 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 24/89 (26%), Positives = 38/89 (42%)
Query: 188 GSADSLVSLWDISE-MLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
GS D + LW +E + T + + + FS IASAS D I + + TG+
Sbjct: 348 GSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKY 407
Query: 247 VHQIPCR-AAMNSVEWNPKYNLLAYAGDD 274
+ + AA+ + W+ LL D
Sbjct: 408 LASLRGHVAAVYQIAWSADSRLLVSGSSD 436
Score = 39 (18.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 186 AVGSADSLVSLWDISEMLCVR-TFTKLEWPVRTISFSHTGD-YIASASEDLFIDISNVHT 243
+V + D SL ++ E R + + P R +S S ++ S +ED ++ + T
Sbjct: 313 SVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKK-PLARM-T 370
Query: 244 GRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKN 276
G HQ A +N V ++P ++A A DK+
Sbjct: 371 G---HQ----ALINQVVFSPDSRVIASASFDKS 396
Score = 38 (18.4 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 174 YCIAIDPMGRYFAVGSADSLVSLW 197
Y + P G+ A G D + +W
Sbjct: 461 YAVDWSPDGQRVASGGKDKCLRIW 484
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 172 (65.6 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 56/195 (28%), Positives = 91/195 (46%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R H + +VA+N +G+ +GS D+T ++W G ++ +E GH + V +
Sbjct: 86 RALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTAS-GE-ELHTLE--GHRNVVYAIA 141
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDEL 132
++ + D +AT S DKT +LW A +GKC + E + + + P T +A G+ D
Sbjct: 142 FNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTA 201
Query: 133 TILDVRKFKPIHRRKFGY-EVNEIAWNMTGEMFFLTTGNAGCYCIAID-PMGRYFAVGSA 190
+ DV + + + E+ + +N TG+ L TG+ I D P GR V S
Sbjct: 202 KLWDVESGEEVSTLAGHFAEIISLCFNTTGDR--LVTGSFDHTAILWDVPSGRKVHVLSG 259
Query: 191 D----SLVSL-WDIS 200
S V WD S
Sbjct: 260 HRGEISCVQFNWDCS 274
Score = 169 (64.5 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 49/151 (32%), Positives = 78/151 (51%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVD--QLCWD 75
GH ++ S+ +N TG +L +GS D TA +W + P G KV L GH + Q WD
Sbjct: 217 GHFAEIISLCFNTTGDRLVTGSFDHTAILWDV-PSGR-KVH--VLSGHRGEISCVQFNWD 272
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDEL 132
LIATAS DK+ ++WDA G+C A L G N +++ + G IA + D
Sbjct: 273 ---CSLIATASLDKSCKVWDAEGGQCL--ATLLGHNDEVLDVCFNYTGQLIATASADGTS 327
Query: 133 TILDVRKFKPIHRRKFGY--EVNEIAWNMTG 161
+ F+ + + + G+ E++++ +N G
Sbjct: 328 RVFSTDTFQCLCQLE-GHKGEISKVCFNAQG 357
Score = 139 (54.0 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 36/118 (30%), Positives = 62/118 (52%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH +V V +N TG +A+ S D T+RV+ + +L GH + ++C++ +
Sbjct: 301 GHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCL----CQLEGHKGEISKVCFNAQ 356
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTI 134
+ ++ TAS DKT R+W ++G C Q E S E + + +G I G++D+ I
Sbjct: 357 GSRVL-TASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRI 413
Score = 132 (51.5 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 37/123 (30%), Positives = 62/123 (50%)
Query: 157 WNM-TGEMFFLTTGN-AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+ TG+ F+ G+ A C+A +P A GS D+ LWD+ V T
Sbjct: 162 WSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAE 221
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGD 273
+ ++ F+ TGD + + S D + +V +GR VH + R ++ V++N +L+A A
Sbjct: 222 IISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASL 281
Query: 274 DKN 276
DK+
Sbjct: 282 DKS 284
Score = 122 (48.0 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 26/77 (33%), Positives = 44/77 (57%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GHK ++ V +N G+++ + SVD+T+RVW ++ G + L GH+D + ++ +
Sbjct: 343 GHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKT---GACLQV-LEGHSDEIFSCAFNYE 398
Query: 78 HADLIATASGDKTVRLW 94
D I T S D T R+W
Sbjct: 399 -GDTIITGSKDNTCRIW 414
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 43/162 (26%), Positives = 78/162 (48%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH+ ++ V +N + +A+ S+D++ +VW E G G+ L GH D V +C++
Sbjct: 258 SGHRGEISCVQFNWDCSLIATASLDKSCKVWDAE--G-GQCL-ATLLGHNDEVLDVCFNY 313
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTIL 135
LIATAS D T R++ + +C Q E GE + + G+ + + D +
Sbjct: 314 T-GQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVW 372
Query: 136 DVRKFKPIHRRKFGY--EVNEIAWNMTGEMFFLTTGNAGCYC 175
V+ + + G+ E+ A+N G+ + TG+ C
Sbjct: 373 CVKTGACLQVLE-GHSDEIFSCAFNYEGDT--IITGSKDNTC 411
Score = 51 (23.0 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 11/58 (18%), Positives = 24/58 (41%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
+ + G S D +W + C++ + + +F++ GD I + S+D
Sbjct: 351 VCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKD 408
Score = 45 (20.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNV 241
G+ A SAD ++ C+ + + + F+ G + +AS D + V
Sbjct: 315 GQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCV 374
Query: 242 HTG 244
TG
Sbjct: 375 KTG 377
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 180 (68.4 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 63/269 (23%), Positives = 122/269 (45%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH V + G+ + + S D+T W I G+ + +GH + V+ +
Sbjct: 95 SGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIAT---GQ-RQRRFKGHGNFVNSVQGSR 150
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILD 136
+ L+ + S D+T+++WDAR + E + + + G + G D+E+ I D
Sbjct: 151 RGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWD 210
Query: 137 VRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSL 196
+RK +H + G+ +++ E F+ T NA + + + R +A G + V +
Sbjct: 211 IRKQAVLHHLR-GHSDTITGMSLSPEGDFILT-NAMDNTLRVWDV-RPYAPG--ERCVKV 265
Query: 197 WDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCR-AA 255
+ + + + W S D I S S D + I +V+T R ++++P +
Sbjct: 266 FQGHQHNFEKNLLRCAW-------SPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGS 318
Query: 256 MNSVEWNPKYNLLAYAGDDKNKY--QADE 282
+N+V+++PK L+ DK Y + DE
Sbjct: 319 VNAVDFSPKEPLILSGSSDKTLYLGEIDE 347
Score = 117 (46.2 bits), Expect = 0.00022, P = 0.00022
Identities = 33/147 (22%), Positives = 65/147 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH+ ++ + ++ G L S D+ +W + + + GH+ +V + + P
Sbjct: 53 GHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMA---MSGHSGAVMEAHFTPD 109
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDE-LTIL 135
+ + T S DKT+ WD +G+ ++ + G +N + G + DD + I
Sbjct: 110 GSHIF-TCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIW 168
Query: 136 DVRKFKPIHRRKFGYEVNEIAWNMTGE 162
D RK H + ++V + + TGE
Sbjct: 169 DARKKHAAHTLESPFQVTAVCFGDTGE 195
Score = 115 (45.5 bits), Expect = 0.00038, P = 0.00038
Identities = 57/224 (25%), Positives = 84/224 (37%)
Query: 14 REYTGHKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
R + GH V+SV + G +L SGS D+T ++W H +E V +
Sbjct: 134 RRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKK-HA-AHTLE---SPFQVTAV 188
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT---YKPDGTHIAVGNRD 129
C+ +I+ D V++WD R K + L G + IT P+G I D
Sbjct: 189 CFGDTGEQVISGGI-DNEVKIWDIR--KQAVLHHLRGHSDTITGMSLSPEGDFILTNAMD 245
Query: 130 DELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGS 189
+ L + DVR + P G ++ G C A P GS
Sbjct: 246 NTLRVWDVRPYAP------GERCVKV---FQGHQHNFEKNLLRC---AWSPGSDKITSGS 293
Query: 190 ADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
AD V +WD++ + V + FS I S S D
Sbjct: 294 ADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSD 337
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 179 (68.1 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 71/234 (30%), Positives = 105/234 (44%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKV-KDIELRGHADSVDQLCWD 75
TGH+ +V SVAW+ G LAS D+T R+W E G + K I GH ++ L W
Sbjct: 2 TGHEDRVWSVAWSPNGFVLASCGGDKTIRIWGKE--GDKWICKTILEDGHQRTIRSLGWS 59
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSG-ENI--NITYKPDGTHIAVGNRDDEL 132
P +A+AS D T +WD +SG+ A L G EN ++ + G+ +A RD +
Sbjct: 60 PC-GTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSV 118
Query: 133 TILDVRK------FKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFA 186
I +V++ IH +V ++ W+ T E+ A C
Sbjct: 119 WIWEVQEDDEYECASVIHSHT--QDVKKVVWHPTKEIL------ASC------------- 157
Query: 187 VGSADSLVSLW--DISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
S D + L+ D + C T E V +ISF +GD I S S+D + I
Sbjct: 158 --SYDDTIKLYKEDEDDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRI 209
Score = 137 (53.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 65/278 (23%), Positives = 122/278 (43%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH++ + S+ W+ GT LAS S D T +W + G + + L GH + V + W
Sbjct: 48 GHQRTIRSLGWSPCGTFLASASFDATTCIWD-QKSGEFEC-NATLEGHENEVKSVDWSVS 105
Query: 78 HADLIATASGDKTVRLWDARSG---KCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELT 133
L+AT DK+V +W+ + +C+ +++ + + P +A + DD +
Sbjct: 106 -GSLLATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIK 164
Query: 134 IL--DVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRY---FAVG 188
+ D + + G+E W+++ F +G+ C + D R + G
Sbjct: 165 LYKEDEDDWSCCDTLE-GHE--STVWSIS----FDGSGDRIVSC-SDDKTVRIWKSYPPG 216
Query: 189 SADSLVSLWDISEMLCVRTFTKL-EWPVRTISFSHTGDYIASASED----LFIDISNVHT 243
+ + +V ++ CV + + + + +S IA+AS D +F + +N
Sbjct: 217 NQEGVVVSGKHTKWKCVCVLSGYHDRTIYDVHWSKVSGLIATASGDDCIRIFKEDTNSDR 276
Query: 244 GRTVHQIPC--RAA----MNSVEWNPK-YNLLAYAGDD 274
+ Q+ R A +NS+ W+PK N+LA DD
Sbjct: 277 NQPSFQLVATQRKAHSMDVNSICWHPKDENILATCSDD 314
Score = 113 (44.8 bits), Expect = 0.00056, P = 0.00056
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-----RGHADSVDQLC 73
H + ++ V W+ +A+ S D R++ + + +L + H+ V+ +C
Sbjct: 240 HDRTIYDVHWSKVSGLIATASGDDCIRIFKEDTNSDRNQPSFQLVATQRKAHSMDVNSIC 299
Query: 74 WDPKHADLIATASGDKTVRLW 94
W PK +++AT S D TV+LW
Sbjct: 300 WHPKDENILATCSDDGTVKLW 320
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 164 (62.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 59/229 (25%), Positives = 101/229 (44%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
TGH+ + W+ G LA+ D+T R+W + K + GH+ ++ + W P
Sbjct: 11 TGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRDVAWSP 70
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSG-ENI--NITYKPDGTHIAVGNRDDELT 133
+A+AS D TV +WD +SG+ A L G EN ++++ G+ +A +RD +
Sbjct: 71 C-GQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRDKSVW 129
Query: 134 ILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSL 193
+ +V + + YE + L T + P A S D+
Sbjct: 130 VWEVAQ-------EDEYECAAV----------LNTHTQDVKKVEWHPHEDILASASYDNT 172
Query: 194 VSLW--DI--SEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
+ L+ D+ S+ T E V +ISF +G+ +AS S+D + I
Sbjct: 173 IKLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGNRLASCSDDQTVKI 221
Score = 138 (53.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 37/128 (28%), Positives = 68/128 (53%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH+ +V SV+W+ +G+ LA+ S D++ VW + + + L H V ++ W P
Sbjct: 102 GHENEVKSVSWSKSGSLLATCSRDKSVWVWEVAQEDEYECAAV-LNTHTQDVKKVEWHP- 159
Query: 78 HADLIATASGDKTVRLWD---ARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTI 134
H D++A+AS D T++L+ A S S +S E+ + DG+ + + D+ T+
Sbjct: 160 HEDILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGNRLASCSDDQTV 219
Query: 135 LDVRKFKP 142
+++KP
Sbjct: 220 KIWQEYKP 227
Score = 131 (51.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 44/180 (24%), Positives = 75/180 (41%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH + + VAW+ G LAS S D T +W + G + + L GH + V + W K
Sbjct: 58 GHSRTIRDVAWSPCGQYLASASFDATVAIWD-KKSGEFEC-NATLEGHENEVKSVSWS-K 114
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDV 137
L+AT S DK+V +W+ +Q+ E + T+ D + +D L
Sbjct: 115 SGSLLATCSRDKSVWVWEV-----AQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASY 169
Query: 138 RKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLW 197
+++ ++ + W+ L + + + I+ D G A S D V +W
Sbjct: 170 DNTIKLYKE----DLADSDWSSFDT---LVSHESTVWSISFDGSGNRLASCSDDQTVKIW 222
Score = 114 (45.2 bits), Expect = 0.00046, P = 0.00046
Identities = 33/108 (30%), Positives = 53/108 (49%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWD--ISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
+A P G+Y A S D+ V++WD E C T E V+++S+S +G +A+ S D
Sbjct: 66 VAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRD 125
Query: 234 LFIDISNVHTGRTVHQIPCRAAMNS-------VEWNPKYNLLAYAGDD 274
+ + V + C A +N+ VEW+P ++LA A D
Sbjct: 126 KSVWVWEV---AQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASYD 170
Score = 52 (23.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 256 MNSVEWNPKY-NLLAYAGDDKN----KYQADE 282
+N+VEWNP LL DD + KY+ +E
Sbjct: 306 VNTVEWNPTVVGLLVTTSDDGDVKLWKYEPEE 337
Score = 41 (19.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 151 EVNEIAWNMTGEMFFLTTGNAG 172
+VN + WN T +TT + G
Sbjct: 305 DVNTVEWNPTVVGLLVTTSDDG 326
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 123 (48.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-VKDIELRGHADSVDQLCWDP 76
GH+ V SV + G AS S+D R+W +E GK +K ++ G D+ + + P
Sbjct: 62 GHQLGVVSVNISQNGAIAASSSLDAHIRLWDLET---GKQIKSMDA-GPVDAWT-VAFSP 116
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTIL 135
+ IAT S V ++ SGK + G+ I +I Y PDG ++A G D + I
Sbjct: 117 D-SKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 136 DVRKFKPIH 144
D+ K +H
Sbjct: 176 DIATGKLLH 184
Score = 112 (44.5 bits), Expect = 0.00065, P = 0.00065
Identities = 31/121 (25%), Positives = 59/121 (48%)
Query: 157 WNM-TGEMF-FLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ TG+ + G + +A P +Y A GS V+++ + +
Sbjct: 91 WDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKF 150
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGD 273
+ +I++S G Y+AS + D I+I ++ TG+ +H + A + S+ ++P LL A D
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 274 D 274
D
Sbjct: 211 D 211
Score = 108 (43.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 44/172 (25%), Positives = 78/172 (45%)
Query: 5 SIPFKNLHSREYTGHKKKVHSVAWNCT---GTK-LASGSVDQTARVWHIEPHGHGKVK-D 59
SI FK H+ H+ + + AW + G++ + +GS+D +VW K++
Sbjct: 6 SILFKQEHA-----HEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDE---KLELQ 57
Query: 60 IELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKP 118
L GH V + A + A++S D +RLWD +GK + + + + + P
Sbjct: 58 WTLEGHQLGVVSVNISQNGA-IAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSP 116
Query: 119 DGTHIAVGNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTG 169
D +IA G+ ++ I V K H G + IA++ G+ +L +G
Sbjct: 117 DSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGK--YLASG 166
Score = 106 (42.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 26/102 (25%), Positives = 51/102 (50%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
IA P G+Y A G+ D +++++DI+ + T P+R+++FS + +AS+D +
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 236 IDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGDDKN 276
I I +V + + + SV ++P + DK+
Sbjct: 214 IKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKS 255
Score = 99 (39.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+A P +F S+D + +WD S CV TF + V ++ ++ TG I SA +D
Sbjct: 238 VAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRA 297
Query: 236 IDI 238
I I
Sbjct: 298 IHI 300
Score = 76 (31.8 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 26/119 (21%), Positives = 52/119 (43%)
Query: 160 TGEMFFLTTGNA-GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL-EWPVRT 217
TG++ G+A + P + S D + ++D+ T + W V +
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSW-VLS 237
Query: 218 ISFSHTGDYIASASEDLFIDISNVHTGRTVHQI-PCRAAMNSVEWNPKYNLLAYAGDDK 275
++FS + S+S D I + + + V+ + + SV++NP + + AGDD+
Sbjct: 238 VAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDR 296
Score = 62 (26.9 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 26/114 (22%), Positives = 45/114 (39%)
Query: 65 HADSVDQLCWDPKHAD---LIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKP 118
H D++ W D I T S D V++W K Q L G +++
Sbjct: 15 HEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQ 74
Query: 119 DGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNM--TGEMFFLTTGN 170
+G A + D + + D+ K I G V+ AW + + + ++ TG+
Sbjct: 75 NGAIAASSSLDAHIRLWDLETGKQIKSMDAG-PVD--AWTVAFSPDSKYIATGS 125
Score = 62 (26.9 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 25/115 (21%), Positives = 51/115 (44%)
Query: 25 SVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIAT 84
+VA++ +A+GS ++ +E GK K+ L + + + P +A+
Sbjct: 111 TVAFSPDSKYIATGSHLGKVNIFGVES---GK-KEHSLDTRGKFILSIAYSPD-GKYLAS 165
Query: 85 ASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTILDVR 138
+ D + ++D +GK E I ++T+ PD + + D + I DV+
Sbjct: 166 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 182 (69.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 59/191 (30%), Positives = 93/191 (48%)
Query: 19 HKKKVHSVAWNCTGT--KLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
HK + +++ W+ KL +G D V G G V D RGHA SV++L W
Sbjct: 254 HKSEGYALDWSPLHPLGKLLTGDNDGLIYVT-TRTEGGGWVTDTRAFRGHASSVEELQWS 312
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQ--QAELSGENINI-TYKPDGTHI-AVGNRDDE 131
P ++ A+AS D TV++WD RS S ++S ++N+ T+ +H+ A G D +
Sbjct: 313 PNEKNVFASASSDGTVKVWDVRSKSRSPAVNVKISNTDVNVMTWSKQTSHLLATGADDGQ 372
Query: 132 LTILDVRKFKPIHRRKFGYEVNEIA-WNMTGEMFFLTTGNAGCYCIAIDPMG-RYFAVGS 189
+ D+R +KP + +A +N E +T+ I P AVGS
Sbjct: 373 WAVWDLRHWKPNPSSSAPITASPVASFNFHKEP--ITS-------IEWHPTDDSVIAVGS 423
Query: 190 ADSLVSLWDIS 200
AD+ V+LWD++
Sbjct: 424 ADNTVTLWDLA 434
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 180 (68.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 66/252 (26%), Positives = 114/252 (45%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V + +N G+ L S S D+T VW E G +VK L+GH V+ C+ +
Sbjct: 107 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET-GE-RVK--RLKGHTSFVNS-CYPAR 161
Query: 78 HA-DLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILD 136
L+ T S D TV+LWD R Q + + + + +T+ I G D+++ + D
Sbjct: 162 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 221
Query: 137 VRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSL 196
+R+ K Y + A ++TG L+ + G Y ++ + M V
Sbjct: 222 LRQ------NKLTYTMRGHADSVTG----LSLSSEGSYLLS-NAMDNTVRVWDVRPFAP- 269
Query: 197 WDISEMLCVRTFT----KLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC 252
+ CV+ F E + S+S G IA+ S D F+ + + + R ++++P
Sbjct: 270 ----KERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG 325
Query: 253 RA-AMNSVEWNP 263
A ++N V ++P
Sbjct: 326 HAGSINEVAFHP 337
Score = 133 (51.9 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 37/149 (24%), Positives = 77/149 (51%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
+GH+ +V+ ++ G+ LAS D+ +W++ +G + L+GH+ +V +L ++
Sbjct: 63 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV----YGDCDNYATLKGHSGAVMELHYN 118
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPD-GTH-IAVGNRDDELT 133
++ +AS DKTV +WD+ +G+ ++ + +N Y G + G+ D +
Sbjct: 119 TD-GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 177
Query: 134 ILDVRKFKPIHRRKFGYEVNEIAWNMTGE 162
+ D+RK I + Y+V + +N T +
Sbjct: 178 LWDIRKKAAIQTFQNTYQVLAVTFNDTSD 206
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 148 (57.2 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 37/123 (30%), Positives = 58/123 (47%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH + V +V ++ + +ASG D +VW GK+ GH + + W P
Sbjct: 174 GHLRGVSAVRFSPDASMIASGGADGAVKVWAAST---GKLI-YTFEGHLAGISTISWSPD 229
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENI--NITYKPDGTHIAVGNRDDELTIL 135
A IA+ S DKT+RLW+ +GK + N I + P G + G+ D+ + +
Sbjct: 230 GAT-IASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLW 288
Query: 136 DVR 138
DVR
Sbjct: 289 DVR 291
Score = 142 (55.0 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 50/193 (25%), Positives = 89/193 (46%)
Query: 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVD- 70
H + GH V+++A++ G L SGS D+ +W + +V L H+D V
Sbjct: 253 HPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRS---ARVMK-SLPAHSDPVSG 308
Query: 71 -QLCWDPKHADLIATASGDKTVRLWDARSGKCSQQA--ELSGENINITYKPDGTHIAVGN 127
+ WD LIA+ + D VR+WD +G+C + E + ++ + P+G ++
Sbjct: 309 IDVVWD---GTLIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWT 365
Query: 128 RDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAV 187
DD + + D + + + + G+ N+ ++++G G G P G FAV
Sbjct: 366 LDDCVRLWDYVEGRCLKTYQ-GHS-NK-KYSLSGAF-----GVYGQSIPGRTP-GYAFAV 416
Query: 188 -GSADSLVSLWDI 199
GS D + WD+
Sbjct: 417 SGSEDGAILCWDV 429
Score = 141 (54.7 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 36/122 (29%), Positives = 61/122 (50%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75
+ GH + +++W+ G +ASGS D+T R+W++ GK GH + V + +
Sbjct: 214 FEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLT---GKAHPTPFIGHHNYVYAIAFS 270
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTI 134
PK +++ + S D+ V LWD RS + + + ++ I DGT IA D + I
Sbjct: 271 PK-GNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRI 329
Query: 135 LD 136
D
Sbjct: 330 WD 331
Score = 77 (32.2 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP-VRTISFSHTGDYIASASEDLFIDISN 240
G A + D LV +WD S C+RT + P V ++ FS G Y+ + + D + + +
Sbjct: 315 GTLIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWD 374
Query: 241 VHTGR 245
GR
Sbjct: 375 YVEGR 379
Score = 64 (27.6 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 208
+ P G+Y + D V LWD E C++T+
Sbjct: 352 VKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTY 384
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 140 (54.3 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 38/123 (30%), Positives = 60/123 (48%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH+ +V +VAWN +GT LAS D++ R+W +E G K + L GH +V + W
Sbjct: 11 GHEDRVWNVAWNPSGTILASCGGDKSIRLWGLEG-GSWVCKSVLLDGHQRTVRGVSWS-N 68
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT---YKPDGTHIAVGNRDDELTI 134
+A++S D T +W + A L G + + P G +A +RD + I
Sbjct: 69 CGRYLASSSFDGTTCIWRRQDDTFESCATLEGHENEVKACGWSPSGRFLATCSRDKTVWI 128
Query: 135 LDV 137
+V
Sbjct: 129 WEV 131
Score = 78 (32.5 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 29/97 (29%), Positives = 43/97 (44%)
Query: 189 SADSLVSLWDI-----SEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHT 243
+AD V +W S LC T + PV +S+ T ++A+A D + +
Sbjct: 211 AADGSVYVWGTKGDRRSWELC-GTLERHPRPVYDVSWCRTRGFLATACGDNAVRVFVKDG 269
Query: 244 GRTVHQIPCRAA------MNSVEWNPKYNLLAYAGDD 274
G ++ C +NSV W+P LLA AGDD
Sbjct: 270 GDCSWRLGCTLTQAHSQDVNSVSWSPSGGLLASAGDD 306
Score = 44 (20.5 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 215 VRTISFSHTGDYIASASEDLFI 236
V ++S+S +G +ASA +D ++
Sbjct: 288 VNSVSWSPSGGLLASAGDDGYV 309
Score = 37 (18.1 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDI 199
++ P G A D V LW I
Sbjct: 291 VSWSPSGGLLASAGDDGYVRLWQI 314
>FB|FBgn0039867 [details] [associations]
symbol:CstF-50 "CstF-50" species:7227 "Drosophila
melanogaster" [GO:0005848 "mRNA cleavage stimulating factor
complex" evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006379 KO:K14406
OMA:LYDHTDE GeneTree:ENSGT00700000104487 HSSP:P46680 GO:GO:0005848
FlyBase:FBgn0039867 NextBio:835499 EMBL:AY094802 RefSeq:NP_651883.1
UniGene:Dm.11654 SMR:Q9V9V0 IntAct:Q9V9V0 MINT:MINT-287008
STRING:Q9V9V0 EnsemblMetazoa:FBtr0085865 GeneID:43734
KEGG:dme:Dmel_CG2261 UCSC:CG2261-RA CTD:43734 InParanoid:Q9V9V0
GenomeRNAi:43734 Uniprot:Q9V9V0
Length = 424
Score = 125 (49.1 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 45/146 (30%), Positives = 75/146 (51%)
Query: 12 HSRE--Y-TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPH-GHGKVKDIE------ 61
HS E Y T HK+ + A++C G+ +A+GSVD + ++ +E +DIE
Sbjct: 95 HSYETAYVTSHKQACRAGAFSCDGSLVATGSVDASIKILDVERMLAKSAPEDIEPGREQQ 154
Query: 62 -------LRGHADSVDQLCWDPKHADLIATASGDKTVRLWD-AR-SGKCSQQAELSGENI 112
L H D V L + PK ++A+AS D TV+L+D A+ S K + + E +
Sbjct: 155 GHPVIRTLYDHTDEVSYLEFHPKE-HILASASRDGTVKLFDIAKPSVKKAHKVFTDCEPV 213
Query: 113 N-ITYKPDGTHIAVGNRDDELTILDV 137
+++ P G ++A+G + L + DV
Sbjct: 214 LCLSFHPTGDYVAIGTEHNVLRVYDV 239
Score = 100 (40.3 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 20/79 (25%), Positives = 37/79 (46%)
Query: 171 AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEW--PVRTISFSHTGDYIA 228
AG C+ P G+ +A GS D + +WD C+ T + + ++ F+ G Y+
Sbjct: 256 AGVTCVKYSPTGKLYATGSYDGDIKIWDGISGRCINTIAEAHGGAAICSLEFTRNGKYLL 315
Query: 229 SASEDLFIDISNVHTGRTV 247
S+ D + + + T R +
Sbjct: 316 SSGMDSLVYLWELCTSRPI 334
Score = 75 (31.5 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 27/100 (27%), Positives = 41/100 (41%)
Query: 169 GNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT------KLEWPVRTISFSH 222
G A + G+Y DSLV LW++ ++T+T K E + F+H
Sbjct: 298 GGAAICSLEFTRNGKYLLSSGMDSLVYLWELCTSRPIQTYTGAGTTGKQEHQTEAV-FNH 356
Query: 223 TGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWN 262
T DY+ LF D + + CR +NS+ N
Sbjct: 357 TEDYV------LFPDEATTSLCSWNSRNGCRLTLNSLGHN 390
Score = 38 (18.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 192 SLVSLWDISEMLCVRTFTKL--EWPVRTISFSHTGDYIASASED 233
SL S W+ S C T L PVR I+ S G + S+D
Sbjct: 370 SLCS-WN-SRNGCRLTLNSLGHNGPVRYITHSPNGPAFLTCSDD 411
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 134 (52.2 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 36/132 (27%), Positives = 61/132 (46%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R Y H +V+ A++ G L + S D VW + G++ L GH V C
Sbjct: 20 RFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKS---GRLL-WRLAGHRGPVKSCC 75
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDEL 132
+ P LIA++S D ++RLWD KC + ++ +++ PD +A G D
Sbjct: 76 FSPD-GRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRA 134
Query: 133 TILDVRKFKPIH 144
+ +V+ + +H
Sbjct: 135 IVWEVQSGRRVH 146
Score = 133 (51.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH++ V +V+++ +LASG D+ A VW ++ G+ + L GH DS+ + P
Sbjct: 108 GHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQS---GRRVHL-LVGHCDSIQSSDFSPT 163
Query: 78 HADLIATASGDKTVRLWDAR-SGKCSQQAELSGENINIT---YKPDGTHIAVGNRDDELT 133
+D +AT S D TV +WD R S L G NI+ Y G +A G+ D +
Sbjct: 164 -SDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGL-LASGSWDKTIC 221
Query: 134 I 134
+
Sbjct: 222 V 222
Score = 130 (50.8 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 39/125 (31%), Positives = 65/125 (52%)
Query: 4 SSIPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR 63
+S P + H+ E GH + + ++ +G LASGS D+T VW +P + ++L+
Sbjct: 183 ASTPVVSYHNLE--GHTGNISCLCYSASGL-LASGSWDKTICVW--KPTTNNL--PLQLK 235
Query: 64 GHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAE--LSGENINITYKPDGT 121
GH V+ L + P L A+A +TV++WD +GKC + + L + I + PDG
Sbjct: 236 GHTIWVNSLAFSPDELKL-ASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACI-FTPDGK 293
Query: 122 HIAVG 126
+ G
Sbjct: 294 LLVSG 298
Score = 123 (48.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 42/159 (26%), Positives = 69/159 (43%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH+ V S ++ G +AS S D + R+W + K + L+GH SV+ + + P
Sbjct: 66 GHRGPVKSCCFSPDGRLIASSSSDHSIRLWDV---ARSKCLHV-LKGHQRSVETVSFSPD 121
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT-YKPDGTHIAVGNRDDELTILD 136
L A+ DK +W+ +SG+ ++I + + P +A G+ D + I D
Sbjct: 122 SKQL-ASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWD 180
Query: 137 VRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYC 175
+R P+ Y N+ G TGN C C
Sbjct: 181 LRASTPV----VSYH------NLEGH-----TGNISCLC 204
Score = 113 (44.8 bits), Expect = 0.00049, P = 0.00049
Identities = 31/116 (26%), Positives = 52/116 (44%)
Query: 157 WNM-TGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W +G + + G+ G P GR A S+D + LWD++ C+ +
Sbjct: 53 WGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRS 112
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLA 269
V T+SFS +AS D + V +GR VH + ++ S +++P + LA
Sbjct: 113 VETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLA 168
Score = 84 (34.6 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 36/130 (27%), Positives = 55/130 (42%)
Query: 149 GYEVNEIAWNM-TGEMFFLTTGNAGCYCIA-IDPMGRYFAVGSADSLVSLWDISEMLCVR 206
G++ I W + +G L G+ + P A GS DS V +WD+ V
Sbjct: 129 GWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVV 188
Query: 207 TFTKLEWPVRTIS---FSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAA-MNSVEWN 262
++ LE IS +S +G +AS S D I + T Q+ +NS+ ++
Sbjct: 189 SYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFS 247
Query: 263 PKYNLLAYAG 272
P LA AG
Sbjct: 248 PDELKLASAG 257
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 177 (67.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 67/248 (27%), Positives = 110/248 (44%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
TGH +V S AW+ G AS D+T RVW+ + + GH ++ +L W
Sbjct: 11 TGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIRELAWSC 70
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSG---ENINITYKPDGTHIAVGNRDDELT 133
+A+AS D TV +WD +SG+ A L G E ++T+ G +A +RD +
Sbjct: 71 C-GHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGNLLATCSRDKSVW 129
Query: 134 ILDVRKFKPIHRRKF-------GY--EVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRY 184
I ++ P ++ G+ +V ++ W+ ++ L + + Y D R
Sbjct: 130 IWEIHH-APDQEDEYECVAVLNGHTQDVKKVCWHPQEDL--LASAS---Y----DNTIRM 179
Query: 185 FAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTG 244
+ ADS W++ E L + + W +ISF TG +AS SED + + +
Sbjct: 180 YRQDLADSE---WEMLEPL--ESHSSTVW---SISFDATGQRLASCSEDTTVKVWQQYGP 231
Query: 245 RTVHQIPC 252
IPC
Sbjct: 232 DNALGIPC 239
>FB|FBgn0032030 [details] [associations]
symbol:Wdr82 species:7227 "Drosophila melanogaster"
[GO:0008352 "katanin complex" evidence=ISS] [GO:0051013
"microtubule severing" evidence=ISS] [GO:0048188 "Set1C/COMPASS
complex" evidence=IDA] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP;IDA] [GO:0080182 "histone H3-K4 trimethylation"
evidence=IMP] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048188 GO:GO:0080182
HSSP:P16649 KO:K14962 GeneTree:ENSGT00530000063965 OMA:CTNMAFW
EMBL:AY069081 RefSeq:NP_609217.1 UniGene:Dm.6967 SMR:Q9VLN1
IntAct:Q9VLN1 MINT:MINT-1570298 STRING:Q9VLN1
EnsemblMetazoa:FBtr0079650 GeneID:34153 KEGG:dme:Dmel_CG17293
UCSC:CG17293-RA FlyBase:FBgn0032030 InParanoid:Q9VLN1
OrthoDB:EOG4C5B12 GenomeRNAi:34153 NextBio:787125 Uniprot:Q9VLN1
Length = 317
Score = 176 (67.0 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 79/273 (28%), Positives = 112/273 (41%)
Query: 9 KNLHSREYTGHKKKVHSVAW-NCTGTKLASGS-VDQTARVWHIEPHGHGKVKDIELRGHA 66
K SR K V + + + T + S + VD T R ++ H + ++ GH
Sbjct: 54 KGTQSRTVNSKKYGVDLIHFTHANNTAIHSSTKVDDTIR--YLSLHDNKYLRYFP--GHT 109
Query: 67 DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVG 126
V LC P D + S DKT+RLWD RS C LSG I Y P+G A G
Sbjct: 110 KKVISLCISPVE-DTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPI-AAYDPEGLIFAAG 167
Query: 127 NRDDELTILDVRKFK--PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRY 184
+ + + D+R F P K E E W TG F + D G+
Sbjct: 168 VNSESIKLYDLRSFDKGPFVTFKLNQE-KECDW--TGLKF------------SRD--GKT 210
Query: 185 FAVGSADSLVSLWDISEMLCVRTFTKLE----WPVRTISFSHTGDYIASASEDLFIDISN 240
+ + S++ L D ++TFT P+ SFS +I S S D + I N
Sbjct: 211 ILISTNGSVIRLVDAFHGTPLQTFTGYPNNKGIPIEA-SFSPDSQFIFSGSTDGRVHIWN 269
Query: 241 VHTGRTVHQI--PCRAAMNSVEWNPKYNLLAYA 271
TG V + + V++NPKY +LA A
Sbjct: 270 ADTGNKVSVLNGDHPGPVQCVQFNPKYMMLASA 302
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 157 (60.3 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 38/122 (31%), Positives = 69/122 (56%)
Query: 2 GESSIPFKNLHSR--EYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKV 57
G++++ F +L + ++T GH+ V S+AW+ G KLASG + +W +P ++
Sbjct: 147 GDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLW--DPATGNQI 204
Query: 58 KDIELRGHADSVDQLCWDPKHAD----LIATASGDKTVRLWDARSGKCSQQAELSGENIN 113
+ L GH+ + LCW+P H + +A+AS D ++R+WD G+C + L+G +
Sbjct: 205 GRV-LTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKI--LTGHTQS 261
Query: 114 IT 115
+T
Sbjct: 262 VT 263
Score = 143 (55.4 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 62/253 (24%), Positives = 105/253 (41%)
Query: 34 KLASGSVDQTARVWHI--EPHGHGKVKDI-----ELRGHADSVDQLCWDPKHADLIATAS 86
K +G +T +V I +P +V+ + L GH ++V + + P +A+ S
Sbjct: 88 KTLAGQAVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHTEAVISVAFSPT-GKYLASGS 146
Query: 87 GDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDVRKFKPI 143
GD TVR WD + + Q G ++I + PDG +A G ++ ++ + D P
Sbjct: 147 GDTTVRFWDLSTE--TPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWD-----PA 199
Query: 144 HRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYC---IAIDPMGRYFAVGSADSLVSLWDIS 200
G ++ + +TG ++T C C + I+P RY A S D + +WD
Sbjct: 200 T----GNQIGRV---LTGHSKWIT-----CLCWEPLHINPECRYLASASKDGSIRIWDTL 247
Query: 201 EMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVE 260
C + T V + + G + S+S+D I + G I CR
Sbjct: 248 MGRCDKILTGHTQSVTCVKWGGDG-LLYSSSQDRTIKVWRSQDG-----ILCRTLQGHAH 301
Query: 261 WNPKYNLLAYAGD 273
W N +A + D
Sbjct: 302 W---VNTMALSTD 311
Score = 140 (54.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 35/119 (29%), Positives = 60/119 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
TGH+ ++ V ++ +AS S D++ ++W GK LRGH +V Q+ W
Sbjct: 382 TGHQALINQVLFSPDTRIIASASFDKSIKLWEGRT---GKYLT-SLRGHVSAVYQIAWSA 437
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT-YKPDGTHIAVGNRDDELTI 134
+ L+ + S D T+++WDA + K + + + T + PDG +A G +D L I
Sbjct: 438 D-SRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRI 495
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/77 (37%), Positives = 38/77 (49%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V+ +AW+ L SGS D T +VW E K I+L GHAD V W P
Sbjct: 425 GHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAET----KKLAIDLPGHADEVFATDWSPD 480
Query: 78 HADLIATASGDKTVRLW 94
+A+ DK +R+W
Sbjct: 481 -GQRVASGGKDKCLRIW 496
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 40/133 (30%), Positives = 63/133 (47%)
Query: 34 KLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWDPKHADLIATASGDKTVR 92
+L SGS D T +W P K K +E + GH ++Q+ + P +IA+AS DK+++
Sbjct: 356 RLVSGSDDFTLFLWR--P-AEDK-KPLERMTGHQALINQVLFSPD-TRIIASASFDKSIK 410
Query: 93 LWDARSGK--CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFK-PIHRRKFG 149
LW+ R+GK S + +S I + D + G+ D L + D K I
Sbjct: 411 LWEGRTGKYLTSLRGHVSAV-YQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHA 469
Query: 150 YEVNEIAWNMTGE 162
EV W+ G+
Sbjct: 470 DEVFATDWSPDGQ 482
Score = 112 (44.5 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 37/127 (29%), Positives = 57/127 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH + V SVA++ TG LASGS D T R W + + +GH V + W P
Sbjct: 125 GHTEAVISVAFSPTGKYLASGSGDTTVRFWDLST----ETPQFTAKGHRHWVLSIAWSPD 180
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT--------YKPDGTHIAVGNRD 129
L A+ + + LWD +G + L+G + IT P+ ++A ++D
Sbjct: 181 GKKL-ASGCKNSQIFLWDPATGNQIGRV-LTGHSKWITCLCWEPLHINPECRYLASASKD 238
Query: 130 DELTILD 136
+ I D
Sbjct: 239 GSIRIWD 245
Score = 65 (27.9 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 22/101 (21%), Positives = 40/101 (39%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+ P R A S D + LW+ + + V I++S + S S D
Sbjct: 391 VLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDST 450
Query: 236 IDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDK 275
+ + + T + +P A + + +W+P +A G DK
Sbjct: 451 LKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDK 491
Score = 54 (24.1 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 23/89 (25%), Positives = 37/89 (41%)
Query: 188 GSADSLVSLWDISE-MLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
GS D + LW +E + T + + + FS IASAS D I + TG+
Sbjct: 360 GSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKY 419
Query: 247 VHQIPCR-AAMNSVEWNPKYNLLAYAGDD 274
+ + +A+ + W+ LL D
Sbjct: 420 LTSLRGHVSAVYQIAWSADSRLLVSGSSD 448
Score = 53 (23.7 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 21/80 (26%), Positives = 33/80 (41%)
Query: 157 WN-MTGEMFFLTTGNAGC-YCIAIDPMGRYFAVGSADSLVSLWDI-SEMLCVRTFTKLEW 213
W TG+ G+ Y IA R GS+DS + +WD ++ L + +
Sbjct: 412 WEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHAD- 470
Query: 214 PVRTISFSHTGDYIASASED 233
V +S G +AS +D
Sbjct: 471 EVFATDWSPDGQRVASGGKD 490
Score = 37 (18.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 253 RAAMNSVEWNPKYNLLAYAGDDKN 276
+A +N V ++P ++A A DK+
Sbjct: 385 QALINQVLFSPDTRIIASASFDKS 408
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 183 (69.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 52/168 (30%), Positives = 80/168 (47%)
Query: 10 NLHSREYTGHKKK-VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADS 68
N H ++ HK + + +A+ T K A+ S D TARVW + +V LRGH
Sbjct: 208 NAHM--FSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEERV----LRGHGAE 261
Query: 69 VDQLCWDPKHADLIATASGD--KTVRLWDARSGKC-SQQAELSGENINITYKPDGTHIAV 125
V + W P LIAT S D + V++WD +SG C + E + + + +G +
Sbjct: 262 VRCIDWHPTKG-LIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNGNWLLT 320
Query: 126 GNRDDELTILDVRKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNAG 172
G RD + + D+R K + R EV +AW+ E F++ G G
Sbjct: 321 GGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDG 368
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 142 (55.0 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 43/131 (32%), Positives = 63/131 (48%)
Query: 157 WNMT-GEMF--FLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEW 213
W+ T G FL G+ C+A P AVG+ D V L+D+S R KL
Sbjct: 1767 WSSTLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHG 1826
Query: 214 PVR---TISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC--RAAMNSVEWNP--KYN 266
R +I+FS +G+ IAS SEDL I + NV T + + I +N + +NP +
Sbjct: 1827 HTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNECE 1886
Query: 267 LLAYAGDDKNK 277
L++ + D K
Sbjct: 1887 LISCSDDYSTK 1897
Score = 130 (50.8 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 32/131 (24%), Positives = 64/131 (48%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH + + S+ ++ +G +AS S D +VW+++ H K + + H D ++ + ++P
Sbjct: 1826 GHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTH---KAEYTIEKAHNDPINCISFNPT 1882
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTILD 136
+ + + S D + ++W + + E S I + Y PDG +IA +RD + +
Sbjct: 1883 NECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIAVYL 1942
Query: 137 VRKFKPIHRRK 147
K + R K
Sbjct: 1943 CSSKKLLFRLK 1953
Score = 98 (39.6 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 9 KNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWH-IEPHGHGKVKD-IELRGHA 66
KN+ + H K V+S W+ GT +AS S D T ++W+ + ++K I+
Sbjct: 1639 KNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSY 1698
Query: 67 DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAV 125
S+ + ++AT + V L+D S K +++N + DG +I
Sbjct: 1699 GSIKSCKFSANSKQILATTMKND-VLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVT 1757
Query: 126 GNRD 129
G+ D
Sbjct: 1758 GSDD 1761
Score = 73 (30.8 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 26/119 (21%), Positives = 56/119 (47%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH + +++ G LAS S D T VW + G+ ++ + + H+ +V+ + P
Sbjct: 1562 GHSNWISCFSFSDDGKTLASSSWDNTVIVWDLIV-GN-QIH--QFKDHSRAVNYCEFSPT 1617
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELS-GENIN-ITYKPDGTHIAVGNRDDELTI 134
+L+ + + D ++ +++ + + + +N + PDGT IA + D + I
Sbjct: 1618 ANNLLMSCAWDSSIIIFNTSDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKI 1676
Score = 64 (27.6 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 29/118 (24%), Positives = 53/118 (44%)
Query: 36 ASGSVDQTARVWHIEPHGHGKVKDI---ELRGHADSVDQLCWDPKHADLIATASGDKTVR 92
AS S + W IE ++KD + G D C+ + +IA+A D +
Sbjct: 1490 ASESGGLKHKTW-IEWLNKPQIKDSCKQTITGLEDGATACCYS-RDGSMIASAGKDSIIH 1547
Query: 93 LWDARSGKCSQQAELSGEN--IN-ITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK 147
++ A +G S+ L G + I+ ++ DG +A + D+ + + D+ IH+ K
Sbjct: 1548 IFKASNG--SELLTLVGHSNWISCFSFSDDGKTLASSSWDNTVIVWDLIVGNQIHQFK 1603
Score = 62 (26.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 20/80 (25%), Positives = 34/80 (42%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
++ P +Y A+G+ D V L DI+ R T + ++ F + + S S D
Sbjct: 2325 LSFSPNDKYLAIGTFDGTVELLDIASGKLRRILTTQVSSITSLKFLDS-TRLVSVSNDRS 2383
Query: 236 IDISNVHTGRT----VHQIP 251
+ + N T +HQ P
Sbjct: 2384 LIVWNFSTSSIENEFIHQSP 2403
Score = 56 (24.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 179 DPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
D GR F+ S D ++ W C+ T T P++ + F+ S+S F
Sbjct: 2050 DASGRIFS-SSDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFNPNSGGGGSSSFSSFSSF 2108
Query: 239 SN 240
S+
Sbjct: 2109 SS 2110
Score = 52 (23.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 23/90 (25%), Positives = 38/90 (42%)
Query: 149 GYEVNEIAWNM-TGEMFFLTTGNAGCYCIAIDPMG-RYFAVGSADSLVSLWDI---SEML 203
G++ N WN+ T + G++ A +Y S D V +WD SE+
Sbjct: 1975 GWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEIT 2034
Query: 204 CVRTFTKLEWPVRTISFSHTGDYIASASED 233
+R T++ +S S I S+S+D
Sbjct: 2035 SLRHQTRIS---DVVSSSDASGRIFSSSDD 2061
Score = 43 (20.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 18/93 (19%), Positives = 43/93 (46%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNV 241
G A GS V ++ V T + V ++SFS Y+A + D +++ ++
Sbjct: 2290 GDLLAAGSRTKQVKIFSPLNDKPVTHQTSSSY-VTSLSFSPNDKYLAIGTFDGTVELLDI 2348
Query: 242 HTGRTVHQIPCR-AAMNSVEWNPKYNLLAYAGD 273
+G+ + + +++ S+++ L++ + D
Sbjct: 2349 ASGKLRRILTTQVSSITSLKFLDSTRLVSVSND 2381
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 176 (67.0 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 44/136 (32%), Positives = 71/136 (52%)
Query: 5 SIPFKNLHSREYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL 62
SIP + +YT GH K + SV ++ G LAS S D+T ++W GK + L
Sbjct: 29 SIPQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYD---GKFERT-L 84
Query: 63 RGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGT 121
GH + + + W + + LI +AS DKT+++WD SGK + + E + +++ P
Sbjct: 85 EGHKEGISDIAWS-QDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSN 143
Query: 122 HIAVGNRDDELTILDV 137
I G+ D+ + I DV
Sbjct: 144 LIVSGSFDENVRIWDV 159
Score = 172 (65.6 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 41/158 (25%), Positives = 82/158 (51%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GHK+ + +AW+ + S S D+T ++W +E GK+ L+GH + V +
Sbjct: 82 RTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVES---GKMVKT-LKGHKEYVFGVS 137
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDEL 132
++P+ ++LI + S D+ VR+WD +G+C++ + + + + DGT + G+ D +
Sbjct: 138 FNPQ-SNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTV 196
Query: 133 TILDVRKFKPIHR--RKFGYEVNEIAWNMTGEMFFLTT 168
I D + ++ + G EV+ + ++ G+ T
Sbjct: 197 RIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGT 234
Score = 162 (62.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 56/222 (25%), Positives = 104/222 (46%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDG 120
L+GH + V + ++P+ ++LI + S D+ VR+WD +G+C++ + + + + DG
Sbjct: 126 LKGHKEYVFGVSFNPQ-SNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDG 184
Query: 121 THIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDP 180
T + G+ D + I D G +N I+ E+ F + P
Sbjct: 185 TLVVSGSYDGTVRIWDTTT---------GQLLNTISTEDGKEVSF----------VKFSP 225
Query: 181 MGRYFAVGSADSLVSLWDISE-MLCVRTFT--KLEWPVRTISFSHT-GDYIASASEDLFI 236
G++ G+ D+ + LW + C++T+T K E +FS T G +I + SED I
Sbjct: 226 NGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLI 285
Query: 237 DISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKNK 277
I N+ T V + + +V +P N++A +K++
Sbjct: 286 YIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDR 327
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 131 (51.2 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 37/127 (29%), Positives = 63/127 (49%)
Query: 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHAD 80
K + S+A++ G LASG++D ++ I GK+ L GHA + L + P +
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIFDIAT---GKLLHT-LEGHAMPIRSLTFSPD-SQ 203
Query: 81 LIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDV 137
L+ TAS D +++++ + S A LSG +N+ + PD TH + D + + DV
Sbjct: 204 LLVTASDDGYIKIYEVQHA--SLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDV 261
Query: 138 RKFKPIH 144
+H
Sbjct: 262 SARTCVH 268
Score = 125 (49.1 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 47/171 (27%), Positives = 79/171 (46%)
Query: 5 SIPFKNLHSREYTGHKKKVHSVAW--NCT-GTKLA-SGSVDQTARVWHIEPHGHGKVKDI 60
SI FK H+ H+ + SV W N G++L SGS+D +VW +
Sbjct: 6 SILFKQEHA-----HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTL 60
Query: 61 ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPD 119
E GH V + P +++A++S D +RLWD SGK + + + ++ + PD
Sbjct: 61 E--GHQLGVVSVDVSPS-GNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPD 117
Query: 120 GTHIAVGNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTG 169
H+A G+ ++ I V K + G + IA++ G+ +L +G
Sbjct: 118 SQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGK--YLASG 166
Score = 121 (47.7 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 40/129 (31%), Positives = 64/129 (49%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-VKDIELRGHADSVDQLCWDP 76
GH+ V SV + +G +AS S+D R+W +E GK ++ I+ G D+ + + P
Sbjct: 62 GHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLES---GKQIRAIDA-GPVDAWS-VAFSP 116
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTIL 135
L AT S V ++ +GK + G+ I +I Y PDG ++A G D + I
Sbjct: 117 DSQHL-ATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 136 DVRKFKPIH 144
D+ K +H
Sbjct: 176 DIATGKLLH 184
Score = 105 (42.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 160 TGEM-FFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTI 218
TG+ + L T IA P G+Y A G+ D +++++DI+ + T P+R++
Sbjct: 137 TGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL 196
Query: 219 SFSHTGDYIASASEDLFIDISNV 241
+FS + +AS+D +I I V
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYEV 219
Score = 93 (37.8 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+A P +F S+D V +WD+S CV TF + V + ++ G I S ++D
Sbjct: 238 VAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQE 297
Query: 236 IDI 238
I +
Sbjct: 298 IHV 300
Score = 68 (29.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 26/114 (22%), Positives = 49/114 (42%)
Query: 65 HADSVDQLCWDPKHAD---LIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKP 118
H D++ + W D L+ + S D V++W + Q+ L G +++ P
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSP 74
Query: 119 DGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNM--TGEMFFLTTGN 170
G +A + D + + D+ K I G V+ AW++ + + L TG+
Sbjct: 75 SGNIMASSSLDAHIRLWDLESGKQIRAIDAG-PVD--AWSVAFSPDSQHLATGS 125
Score = 63 (27.2 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 23/109 (21%), Positives = 42/109 (38%)
Query: 160 TGEMFFLTTGNA-GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL-EWPVRT 217
TG++ G+A + P + S D + ++++ T + W V
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSW-VLN 237
Query: 218 ISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYN 266
++FS + S+S D + + +V VH + V W KYN
Sbjct: 238 VAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDH--QDQV-WGVKYN 283
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 179 (68.1 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 59/216 (27%), Positives = 93/216 (43%)
Query: 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLI 82
+ SV ++ G LA+G+ D+ R+W + K+ LRGH + L + P D +
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKI----LRGHEQDIYSLDFFPD-GDRL 312
Query: 83 ATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP 142
+ SGD++VR+WD R+ +CS + + PDG IA G+ D + + D
Sbjct: 313 VSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFL 372
Query: 143 IHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDIS-- 200
+ R G NE N G Y +A G A GS D V LW +
Sbjct: 373 VERLDSG---NE---NGNGH-------EDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGK 419
Query: 201 ---EMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
+ C T+ + V ++ + +YI S S+D
Sbjct: 420 SDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKD 455
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 31/83 (37%), Positives = 49/83 (59%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK-DIELRGHADSVDQLCWDP 76
GH+ V+SVA++ G ++ASGS+D+T ++WH+E K ++ GH D V +C P
Sbjct: 385 GHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTP 444
Query: 77 KHADLIATASGDKTVRLWDARSG 99
+ + I + S D+ V WD SG
Sbjct: 445 DN-EYILSGSKDRGVIFWDQASG 466
Score = 126 (49.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 47/183 (25%), Positives = 77/183 (42%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH++ ++S+ + G +L SGS D++ R+W + IE D V + P
Sbjct: 295 GHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIE-----DGVTTVAVSPD 349
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTI--L 135
LIA S D+TVR+WD+ +G ++ + EN N ++ +A N +++ L
Sbjct: 350 -GKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGN-GHEDSVYSVAFSNNGEQIASGSL 407
Query: 136 DVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVS 195
D R K H + + G F+ + + P Y GS D V
Sbjct: 408 D-RTVKLWHLEGKSDKKSTCEVTYIGHKDFVLS-------VCCTPDNEYILSGSKDRGVI 459
Query: 196 LWD 198
WD
Sbjct: 460 FWD 462
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 179 (68.1 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 59/216 (27%), Positives = 93/216 (43%)
Query: 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLI 82
+ SV ++ G LA+G+ D+ R+W + K+ LRGH + L + P D +
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKI----LRGHEQDIYSLDFFPD-GDRL 312
Query: 83 ATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP 142
+ SGD++VR+WD R+ +CS + + PDG IA G+ D + + D
Sbjct: 313 VSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFL 372
Query: 143 IHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDIS-- 200
+ R G NE N G Y +A G A GS D V LW +
Sbjct: 373 VERLDSG---NE---NGNGH-------EDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGK 419
Query: 201 ---EMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
+ C T+ + V ++ + +YI S S+D
Sbjct: 420 SDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKD 455
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 31/83 (37%), Positives = 49/83 (59%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK-DIELRGHADSVDQLCWDP 76
GH+ V+SVA++ G ++ASGS+D+T ++WH+E K ++ GH D V +C P
Sbjct: 385 GHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTP 444
Query: 77 KHADLIATASGDKTVRLWDARSG 99
+ + I + S D+ V WD SG
Sbjct: 445 DN-EYILSGSKDRGVIFWDQASG 466
Score = 126 (49.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 47/183 (25%), Positives = 77/183 (42%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH++ ++S+ + G +L SGS D++ R+W + IE D V + P
Sbjct: 295 GHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIE-----DGVTTVAVSPD 349
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTI--L 135
LIA S D+TVR+WD+ +G ++ + EN N ++ +A N +++ L
Sbjct: 350 -GKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGN-GHEDSVYSVAFSNNGEQIASGSL 407
Query: 136 DVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVS 195
D R K H + + G F+ + + P Y GS D V
Sbjct: 408 D-RTVKLWHLEGKSDKKSTCEVTYIGHKDFVLS-------VCCTPDNEYILSGSKDRGVI 459
Query: 196 LWD 198
WD
Sbjct: 460 FWD 462
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 181 (68.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 74/290 (25%), Positives = 128/290 (44%)
Query: 9 KNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADS 68
+NL++ + SV ++ G LA+G+ D+ R+W IE + K+ I L+GH
Sbjct: 432 ENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIE---NRKIVMI-LQGHEQD 487
Query: 69 VDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKP-DGTHIAVGN 127
+ L + P D + + SGD+TVR+WD R+G+CS + + P DG +IA G+
Sbjct: 488 IYSLDYFPS-GDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGS 546
Query: 128 RDDELTILDVRKFKPIHRRKFGYEVNEI-AWNMTGEMFFLTTGNA-GCYCIAIDPMGRYF 185
D + + D + G+ V + + N +G TG+ Y + G+
Sbjct: 547 LDRAVRVWD---------SETGFLVERLDSENESG------TGHKDSVYSVVFTRDGQSV 591
Query: 186 AVGSADSLVSLWDISEM------------LCVRTFTKLEWPVRTISFSHTGDYIASASED 233
GS D V LW++ C T+ + V +++ + +YI S S+D
Sbjct: 592 VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD 651
Query: 234 LFIDISNVHTGRTV-----HQ--IPCRAAMNSVEWNPKYNLLAY-AGDDK 275
+ + +G + H+ + A N P+YN+ A +GD K
Sbjct: 652 RGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSPLGPEYNVFATGSGDCK 701
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 40/129 (31%), Positives = 65/129 (50%)
Query: 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQ 71
H+ E GH+ V SV ++ LAS S D T ++W G G ++ L GH D V
Sbjct: 415 HTLE--GHRDWVRSVIFSHDSQLLASASDDSTVKIWDT---GTGSLQHT-LEGHRDWVRS 468
Query: 72 LCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNR 128
+ + + L+A+AS D+TVR+WD G S + L G + ++++ D +A +
Sbjct: 469 VIFS-HDSRLLASASDDRTVRIWDTEKG--SHKHTLEGHSSLVTSVSFSHDSRLLASASN 525
Query: 129 DDELTILDV 137
D + I D+
Sbjct: 526 DQTVRIWDI 534
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 34/89 (38%), Positives = 48/89 (53%)
Query: 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQ 71
H+ E GH+ V SV ++ LAS S D+T R+W E H L GH+ V
Sbjct: 457 HTLE--GHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHT----LEGHSSLVTS 510
Query: 72 LCWDPKHADLIATASGDKTVRLWD--ARS 98
+ + + L+A+AS D+TVR+WD ARS
Sbjct: 511 VSFS-HDSRLLASASNDQTVRIWDIEARS 538
Score = 120 (47.3 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 35/120 (29%), Positives = 61/120 (50%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH+ V SV+++ LAS S D+T ++W E G ++ L GH+D V + +
Sbjct: 294 GHEAAVLSVSYSHDSRLLASASDDRTVKIWDTET---GSLQHT-LEGHSDLVRSVIFS-H 348
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTILD 136
+ L+A+AS D TV++WD +G E + + ++ + D +A + D + I D
Sbjct: 349 DSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 407
Score = 119 (46.9 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 37/126 (29%), Positives = 60/126 (47%)
Query: 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQ 71
H+ E GH V SV ++ LAS S D T ++W G G ++ L GH D V
Sbjct: 332 HTLE--GHSDLVRSVIFSHDSRLLASAS-DSTVKIWDT---GTGSLQHT-LEGHRDWVRS 384
Query: 72 LCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDD 130
+ + + L+A+AS D TV++WD +G E + + ++ + D +A + D
Sbjct: 385 VIFS-HDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDS 443
Query: 131 ELTILD 136
+ I D
Sbjct: 444 TVKIWD 449
Score = 107 (42.7 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 32/92 (34%), Positives = 45/92 (48%)
Query: 186 AVGSADSLVSLWDISEMLCVRTFT-KLEWPVRTISFSHTGDYIASASEDLFIDISNVHTG 244
A S DS V +WD T +W VR++ FSH +ASAS+D + I + TG
Sbjct: 395 ASASDDSTVKIWDTGTGSLQHTLEGHRDW-VRSVIFSHDSQLLASASDDSTVKIWDTGTG 453
Query: 245 RTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 275
H + R + SV ++ LLA A DD+
Sbjct: 454 SLQHTLEGHRDWVRSVIFSHDSRLLASASDDR 485
Score = 99 (39.9 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 186 AVGSADSLVSLWDISEMLCVRTFT-KLEWPVRTISFSHTGDYIASASEDLFIDISNVHTG 244
A S DS V +WD T +W VR++ FSH +ASAS+D + I + G
Sbjct: 437 ASASDDSTVKIWDTGTGSLQHTLEGHRDW-VRSVIFSHDSRLLASASDDRTVRIWDTEKG 495
Query: 245 RTVHQIPCRAAM-NSVEWNPKYNLLAYAGDDK 275
H + +++ SV ++ LLA A +D+
Sbjct: 496 SHKHTLEGHSSLVTSVSFSHDSRLLASASNDQ 527
Score = 75 (31.5 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 22/85 (25%), Positives = 36/85 (42%)
Query: 183 RYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVH 242
R A S D V +WD + T V ++SFSH +ASAS D + I ++
Sbjct: 476 RLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIE 535
Query: 243 TGRTVHQIPCRAAMNSVEWNPKYNL 267
H A + ++ ++ +L
Sbjct: 536 ARSLQHTFDLDATIEAMRFDKATSL 560
Score = 74 (31.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDG 120
L GH +V + + + L+A+AS D+TV++WD +G E + + ++ + D
Sbjct: 292 LEGHEAAVLSVSYS-HDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDS 350
Query: 121 THIAVGNRDDELTILD 136
+A + D + I D
Sbjct: 351 RLLASAS-DSTVKIWD 365
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 124 (48.7 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 47/171 (27%), Positives = 78/171 (45%)
Query: 5 SIPFKNLHSREYTGHKKKVHSVAW--NCT-GTKLA-SGSVDQTARVWHIEPHGHGKVKDI 60
SI FK H+ H+ + SV W N G++L SGS+D +VW
Sbjct: 6 SILFKQEHA-----HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDER--LEMQW 58
Query: 61 ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPD 119
L GH V + P +++A++S D +RLWD SGK + + + ++ + PD
Sbjct: 59 ALEGHQLGVVSVDVSPS-GNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPD 117
Query: 120 GTHIAVGNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTG 169
H+A G+ ++ I V K + G + IA++ G+ +L +G
Sbjct: 118 SQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGK--YLASG 166
Score = 123 (48.4 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 40/129 (31%), Positives = 64/129 (49%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-VKDIELRGHADSVDQLCWDP 76
GH+ V SV + +G +AS S+D R+W +E GK ++ I+ G D+ + + P
Sbjct: 62 GHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLES---GKQIRSIDA-GPVDAWS-VAFSP 116
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTIL 135
L AT S V ++ +GK + G+ I +I Y PDG ++A G D + I
Sbjct: 117 DSQHL-ATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 136 DVRKFKPIH 144
D+ K +H
Sbjct: 176 DIATGKLLH 184
Score = 122 (48.0 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHAD 80
K + S+A++ G LASG++D ++ I GK+ L GHA + L + +
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIFDIAT---GKLLHT-LEGHAMPIRSLTFSTD-SQ 203
Query: 81 LIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDV 137
L+ TAS D ++++D + S A LSG +N+ + PD H + D + + DV
Sbjct: 204 LLVTASDDGYIKIYDVQHA--SLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDV 261
Query: 138 RKFKPIH 144
+H
Sbjct: 262 SARTCVH 268
Score = 106 (42.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 160 TGEM-FFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTI 218
TG+ + L T IA P G+Y A G+ D +++++DI+ + T P+R++
Sbjct: 137 TGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL 196
Query: 219 SFSHTGDYIASASEDLFIDISNV 241
+FS + +AS+D +I I +V
Sbjct: 197 TFSTDSQLLVTASDDGYIKIYDV 219
Score = 93 (37.8 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+A P +F S+D V +WD+S CV TF + V + ++ G I S +D
Sbjct: 238 VAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQE 297
Query: 236 IDI 238
I +
Sbjct: 298 IHV 300
Score = 66 (28.3 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 26/114 (22%), Positives = 48/114 (42%)
Query: 65 HADSVDQLCWDPKHAD---LIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKP 118
H D++ + W D L+ + S D V++W + Q L G +++ P
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSP 74
Query: 119 DGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNM--TGEMFFLTTGN 170
G +A + D + + D+ K I G V+ AW++ + + L TG+
Sbjct: 75 SGNIMASSSLDAHIRLWDLESGKQIRSIDAG-PVD--AWSVAFSPDSQHLATGS 125
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 166 (63.5 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 66/240 (27%), Positives = 106/240 (44%)
Query: 15 EYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
E+T GHK ++ VAW+ G AS D+ R+W + + K I GH ++ ++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLSGNSWS-TKTILSDGHKRTIREI 65
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG-ENI--NITYKPDGTHIAVGNRD 129
W P +A+AS D T +W SG+ A L G EN ++++ G +A +RD
Sbjct: 66 RWSPC-GQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSKSGGLLATCSRD 124
Query: 130 DELTILDVR---KFK-PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYF 185
+ I +V +F+ +V + W+ T E+ L + + Y D + F
Sbjct: 125 KSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKEI--LASAS---Y----DNTIKMF 175
Query: 186 AVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNV-HTG 244
A + DS WD + L T T W +I F G+ + S S+D + I H G
Sbjct: 176 AESALDSD---WDCTATLSSHTSTV--W---SIDFDADGERLVSCSDDTTLKIWRAYHPG 227
Score = 44 (20.5 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 256 MNSVEWNP 263
+NSVEWNP
Sbjct: 306 VNSVEWNP 313
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 147 (56.8 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 51/181 (28%), Positives = 80/181 (44%)
Query: 6 IPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH 65
+P S + H V SV + G + S D+T +VW H + L H
Sbjct: 51 VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWAT----HRQKFLFSLSQH 106
Query: 66 ADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIA 124
+ V + P LI +AS DKTV+LWD S +C E G + + P GT IA
Sbjct: 107 INWVRCAKFSPD-GRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIA 165
Query: 125 VGNRDDELTILDVRKFKPI-HRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPM-G 182
D+ + + DVR + + H + VN ++++ +G +L T ++ +D M G
Sbjct: 166 AAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGN--YLITASSDSTLKILDLMEG 223
Query: 183 R 183
R
Sbjct: 224 R 224
Score = 123 (48.4 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 46/140 (32%), Positives = 64/140 (45%)
Query: 13 SREY--TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVD 70
SR Y TGHK V V ++ +G LASGS D+T R+W G V R H +V
Sbjct: 14 SRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV----FRAHTATVR 69
Query: 71 QL--CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN----ITYKPDGTHIA 124
+ C D + TAS DKTV++W K LS ++IN + PDG I
Sbjct: 70 SVHFCSDGQS---FVTASDDKTVKVWATHRQKFL--FSLS-QHINWVRCAKFSPDGRLIV 123
Query: 125 VGNRDDELTILDVRKFKPIH 144
+ D + + D + +H
Sbjct: 124 SASDDKTVKLWDKSSRECVH 143
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 39/150 (26%), Positives = 69/150 (46%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI-ELRGHADSVDQLCWDPK 77
H V ++ G + S S D+T ++W + V E G VD + P
Sbjct: 106 HINWVRCAKFSPDGRLIVSASDDKTVKLW--DKSSRECVHSYCEHGGFVTYVD---FHPS 160
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILD 136
IA A D TV++WD R+ + Q +L +N +++ P G ++ + D L ILD
Sbjct: 161 -GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILD 219
Query: 137 VRKFKPIHRRKFGYE--VNEIAWNMTGEMF 164
+ + + ++ G++ +A++ TGE F
Sbjct: 220 LMEGRLLYTLH-GHQGPATTVAFSRTGEYF 248
Score = 119 (46.9 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 35/122 (28%), Positives = 54/122 (44%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
C P GR S D V LWD S CV ++ + V + F +G IA+A D
Sbjct: 112 CAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 171
Query: 235 FIDISNVHTGRTVHQIPCR-AAMNSVEWNPKYNLLAYAGDDKNKYQAD--EG--VFRIYG 289
+ + +V T R + AA+N + ++P N L A D D EG ++ ++G
Sbjct: 172 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 231
Query: 290 FE 291
+
Sbjct: 232 HQ 233
Score = 97 (39.2 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
++ P G Y S+DS + + D+ E + T + P T++FS TG+Y AS D
Sbjct: 197 LSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 254
Score = 95 (38.5 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 31/120 (25%), Positives = 54/120 (45%)
Query: 40 VDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR-S 98
+D VWH++P GH D+V + + P L+A+ S DKTVR+W
Sbjct: 1 MDSCLMVWHMKPQSRA----YRFTGHKDAVTCVNFSPS-GHLLASGSRDKTVRIWVPNVK 55
Query: 99 GKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNE-IAW 157
G+ + + ++ + DG + D+ T+ K HR+KF + +++ I W
Sbjct: 56 GESTVFRAHTATVRSVHFCSDGQSFVTAS--DDKTV----KVWATHRQKFLFSLSQHINW 109
Score = 66 (28.3 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 159 MTGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDIS-EMLCVRTFTKLEWPVR 216
M G + + G+ G +A G YFA G +D V +W + +++ TK+ P
Sbjct: 221 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDHGEVTKVPRPPA 280
Query: 217 TISFS 221
T++ S
Sbjct: 281 TLASS 285
>UNIPROTKB|F1PDM3 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AAEX03012077 RefSeq:XP_850437.1 ProteinModelPortal:F1PDM3
Ensembl:ENSCAFT00000008242 GeneID:607653 KEGG:cfa:607653
NextBio:20893365 Uniprot:F1PDM3
Length = 322
Score = 173 (66.0 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 77/292 (26%), Positives = 136/292 (46%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW-D 75
T H+ +H + GT+LA+ S D++ +++ + +G G++ +LRGH V Q+ W
Sbjct: 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVR-NG-GQILIADLRGHEGPVWQVAWAH 67
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN--IN-ITYKPD--GTHIAVGNRDD 130
P + +++A+ S D+ V +W +G + E +G + +N + + P G +A G+ D
Sbjct: 68 PMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDG 127
Query: 131 ELTIL--------DVRKFKPIHRRKFGYEVNEIAWN---MTGEMFFLTTGNAGCYCIAID 179
+++L +V+K H G N ++W + G + +G Y
Sbjct: 128 AISLLTYTGEGQWEVKKINNAHT--IG--CNAVSWAPAVVPGSLIDQPSGQKPNYI---- 179
Query: 180 PMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE----WPVRTISFSHT-G---DYIASAS 231
+ FA G D+L+ LW E + KLE W VR ++++ + G IAS S
Sbjct: 180 ---KKFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDW-VRDVAWAPSIGLPTSTIASCS 235
Query: 232 ED--LFIDISNVHTGRTVHQIPCRAAMNSVEWNPKY----NLLAYAGDDKNK 277
+D +FI + +G T N V W+ + N+LA +G D NK
Sbjct: 236 QDGRVFIWTCDDTSGNTWSP-KLLHKFNDVVWHVSWSITANILAVSGGD-NK 285
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 133 (51.9 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 42/129 (32%), Positives = 65/129 (50%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-VKDIELRGHADSVDQLCWDP 76
GH+ V SV + TG+ AS S+D R+W +E GK +K I+ G D+ L + P
Sbjct: 62 GHQLGVVSVDISHTGSIAASSSLDAHIRLWDLET---GKQIKSIDA-GPVDAWS-LAFSP 116
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTIL 135
+ +AT S V ++ +GK + G+ I +I Y PDG ++A G D + I
Sbjct: 117 D-SQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 136 DVRKFKPIH 144
D+ K +H
Sbjct: 176 DIATGKLLH 184
Score = 122 (48.0 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHAD 80
K + S+A++ G LASG++D ++ I GK+ L GHA + L + P +
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIFDIAT---GKLLHT-LEGHAMPIRSLTFSPD-SQ 203
Query: 81 LIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDV 137
L+ TAS D ++++D + + LSG +N+ + PD TH + D + + D
Sbjct: 204 LLVTASDDGYIKIYDVQHANLA--GTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDA 261
Query: 138 RKFKPIH 144
+H
Sbjct: 262 GTRTCVH 268
Score = 108 (43.1 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 43/165 (26%), Positives = 75/165 (45%)
Query: 14 REYTGHKKKVHSVAWNCT---GTK-LASGSVDQTARVWHIEPHGHGKVKDIE--LRGHAD 67
++ H + SVAW G++ + SGS+D +VW K+ D++ L GH
Sbjct: 10 KQEQAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDE---KL-DLQWTLEGHQL 65
Query: 68 SVDQLCWDPKHADLIATASG-DKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAV 125
V + D H IA +S D +RLWD +GK + + + ++ + PD +A
Sbjct: 66 GVVSV--DISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLAT 123
Query: 126 GNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTG 169
G+ ++ I V K + G + IA++ G+ +L +G
Sbjct: 124 GSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGK--YLASG 166
Score = 106 (42.4 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 160 TGEM-FFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTI 218
TG+ + L T IA P G+Y A G+ D +++++DI+ + T P+R++
Sbjct: 137 TGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL 196
Query: 219 SFSHTGDYIASASEDLFIDISNV 241
+FS + +AS+D +I I +V
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYDV 219
Score = 81 (33.6 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+A P +F S+D V +WD CV TF + V + ++ +G I S +D
Sbjct: 238 VAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQE 297
Query: 236 IDI 238
I I
Sbjct: 298 IHI 300
Score = 62 (26.9 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 23/119 (19%), Positives = 47/119 (39%)
Query: 160 TGEMFFLTTGNA-GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL-EWPVRT 217
TG++ G+A + P + S D + ++D+ T + W V
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSW-VLN 237
Query: 218 ISFSHTGDYIASASEDLFIDISNVHTGRTVHQI-PCRAAMNSVEWNPKYNLLAYAGDDK 275
++F + S+S D + + + T VH + + V++N + + GDD+
Sbjct: 238 VAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQ 296
Score = 62 (26.9 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 26/116 (22%), Positives = 48/116 (41%)
Query: 63 RGHADSVDQLCWDPKHAD---LIATASGDKTVRLWDARSGKCSQQAELSGEN---INITY 116
+ H D++ + W D + + S D V++W K Q L G +++
Sbjct: 13 QAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDI 72
Query: 117 KPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNM--TGEMFFLTTGN 170
G+ A + D + + D+ K I G V+ AW++ + + FL TG+
Sbjct: 73 SHTGSIAASSSLDAHIRLWDLETGKQIKSIDAG-PVD--AWSLAFSPDSQFLATGS 125
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 133 (51.9 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 42/129 (32%), Positives = 65/129 (50%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-VKDIELRGHADSVDQLCWDP 76
GH+ V SV + TG+ AS S+D R+W +E GK +K I+ G D+ L + P
Sbjct: 62 GHQLGVVSVDISHTGSIAASSSLDAHIRLWDLET---GKQIKSIDA-GPVDAWS-LAFSP 116
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTIL 135
+ +AT S V ++ +GK + G+ I +I Y PDG ++A G D + I
Sbjct: 117 D-SQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 136 DVRKFKPIH 144
D+ K +H
Sbjct: 176 DIATGKLLH 184
Score = 122 (48.0 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHAD 80
K + S+A++ G LASG++D ++ I GK+ L GHA + L + P +
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIFDIAT---GKLLHT-LEGHAMPIRSLTFSPD-SQ 203
Query: 81 LIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDV 137
L+ TAS D ++++D + + LSG +N+ + PD TH + D + + D
Sbjct: 204 LLVTASDDGYIKIYDVQHANLA--GTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDA 261
Query: 138 RKFKPIH 144
+H
Sbjct: 262 GTRTCVH 268
Score = 108 (43.1 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 43/165 (26%), Positives = 75/165 (45%)
Query: 14 REYTGHKKKVHSVAWNCT---GTK-LASGSVDQTARVWHIEPHGHGKVKDIE--LRGHAD 67
++ H + SVAW G++ + SGS+D +VW K+ D++ L GH
Sbjct: 10 KQEQAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDE---KL-DLQWTLEGHQL 65
Query: 68 SVDQLCWDPKHADLIATASG-DKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAV 125
V + D H IA +S D +RLWD +GK + + + ++ + PD +A
Sbjct: 66 GVVSV--DISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLAT 123
Query: 126 GNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTG 169
G+ ++ I V K + G + IA++ G+ +L +G
Sbjct: 124 GSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGK--YLASG 166
Score = 106 (42.4 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 160 TGEM-FFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTI 218
TG+ + L T IA P G+Y A G+ D +++++DI+ + T P+R++
Sbjct: 137 TGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL 196
Query: 219 SFSHTGDYIASASEDLFIDISNV 241
+FS + +AS+D +I I +V
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYDV 219
Score = 81 (33.6 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+A P +F S+D V +WD CV TF + V + ++ +G I S +D
Sbjct: 238 VAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQE 297
Query: 236 IDI 238
I I
Sbjct: 298 IHI 300
Score = 62 (26.9 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 23/119 (19%), Positives = 47/119 (39%)
Query: 160 TGEMFFLTTGNA-GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL-EWPVRT 217
TG++ G+A + P + S D + ++D+ T + W V
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSW-VLN 237
Query: 218 ISFSHTGDYIASASEDLFIDISNVHTGRTVHQI-PCRAAMNSVEWNPKYNLLAYAGDDK 275
++F + S+S D + + + T VH + + V++N + + GDD+
Sbjct: 238 VAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQ 296
Score = 62 (26.9 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 26/116 (22%), Positives = 52/116 (44%)
Query: 63 RGHADSVDQLCW--DPKH-ADLIATASGDKTVRLWDARSGKCSQQAELSGEN---INITY 116
+ H D++ + W + K+ ++ + + S D V++W K Q L G +++
Sbjct: 13 QAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDI 72
Query: 117 KPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNM--TGEMFFLTTGN 170
G+ A + D + + D+ K I G V+ AW++ + + FL TG+
Sbjct: 73 SHTGSIAASSSLDAHIRLWDLETGKQIKSIDAG-PVD--AWSLAFSPDSQFLATGS 125
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 141 (54.7 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 40/135 (29%), Positives = 67/135 (49%)
Query: 3 ESSIPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL 62
+S+ P +H GH+K V+ +++ G +A+ S D + R+W + GK L
Sbjct: 377 KSTKPITKMH-----GHQKVVNHASFSPDGRCIATASFDSSVRLWDGKT---GKFL-ATL 427
Query: 63 RGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPD 119
RGH +V Q W + L+ ++S D T+++WD RS K + +L G + + PD
Sbjct: 428 RGHVAAVYQCAWSTD-SRLLVSSSQDTTLKVWDVRSKK--MKFDLPGHEDQVFAVDWSPD 484
Query: 120 GTHIAVGNRDDELTI 134
G +A G D + I
Sbjct: 485 GQRVASGGADKAVRI 499
Score = 138 (53.6 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 48/149 (32%), Positives = 70/149 (46%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V VAW + +A+GS+D T R W +P + D LR H + LCW P
Sbjct: 175 GHTNWVSCVAWAPDASIIATGSMDNTIRFW--DPKKGSPIGDA-LRRHTKPIMALCWQPL 231
Query: 78 HA--D----LIATASGDKTVRLWDARSGKCSQQAELSGENINIT-YKPDGTH-IAVGNRD 129
H D L+A+ S D TVR+W+ + + LSG IT + G + I + D
Sbjct: 232 HLAPDSGPYLLASGSKDNTVRIWNVKLR--TLLFTLSGHTAPITCVRWGGQNWIYSSSYD 289
Query: 130 DELTILDVRKFKPIHRRKFGY--EVNEIA 156
+ I D + K +H K G+ VN ++
Sbjct: 290 KTIRIWDAKDGKCLHILK-GHAARVNHLS 317
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 56/230 (24%), Positives = 103/230 (44%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN--IN-ITYKP 118
+ GH ++ + P + + T SGD T RLWD + + A + G ++ + + P
Sbjct: 130 MNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQ--TPIATMKGHTNWVSCVAWAP 187
Query: 119 DGTHIAVGNRDDELTILDVRKFKPIHR--RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCI 176
D + IA G+ D+ + D +K PI R+ + + W + L ++G Y +
Sbjct: 188 DASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCW----QPLHLAP-DSGPYLL 242
Query: 177 AIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFI 236
A GS D+ V +W++ + T + P+ + + ++I S+S D I
Sbjct: 243 AS---------GSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQ-NWIYSSSYDKTI 292
Query: 237 DISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLL--AYAGDD-KNKYQADE 282
I + G+ +H + AA +N + + ++ L AY D K K +DE
Sbjct: 293 RIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAYDHTDFKPKSFSDE 342
Score = 120 (47.3 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 28/83 (33%), Positives = 44/83 (53%)
Query: 18 GHKKKVHSVAWN-CTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
GH + S ++ T ++L +GS D TAR+W + + ++GH + V + W P
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDT----QTPIATMKGHTNWVSCVAWAP 187
Query: 77 KHADLIATASGDKTVRLWDARSG 99
A +IAT S D T+R WD + G
Sbjct: 188 D-ASIIATGSMDNTIRFWDPKKG 209
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 27/77 (35%), Positives = 37/77 (48%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V+ AW+ L S S D T +VW + K+K +L GH D V + W P
Sbjct: 429 GHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSK---KMK-FDLPGHEDQVFAVDWSPD 484
Query: 78 HADLIATASGDKTVRLW 94
+A+ DK VR+W
Sbjct: 485 -GQRVASGGADKAVRIW 500
Score = 115 (45.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 43/147 (29%), Positives = 64/147 (43%)
Query: 35 LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94
LASGS D T R+W+++ + L GH + + W ++ I ++S DKT+R+W
Sbjct: 242 LASGSKDNTVRIWNVKL----RTLLFTLSGHTAPITCVRWGGQN--WIYSSSYDKTIRIW 295
Query: 95 DARSGKCSQQAELSGENINITYKPDGT-HIAVGNRDDELTILDVRKFKPIHRRKFGYEVN 153
DA+ GKC L G + + T H+ D T + F RRK E
Sbjct: 296 DAKDGKCLHI--LKGHAARVNHLSLSTEHVLRSGAYDH-TDFKPKSFSD-ERRK-AKERY 350
Query: 154 EIAWNMTGEMFFLTTGNAGCYCIAIDP 180
E +GE L + + I DP
Sbjct: 351 EACLKQSGER--LVSASDDLQLILWDP 375
Score = 83 (34.3 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 177 AIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFI 236
+ P GR A S DS V LWD + T V ++S + S+S+D +
Sbjct: 396 SFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTL 455
Query: 237 DISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDK 275
+ +V + + +P + +V+W+P +A G DK
Sbjct: 456 KVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADK 495
Score = 61 (26.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 25/93 (26%), Positives = 43/93 (46%)
Query: 187 VGSADSL-VSLWDISEMLCVRTFTKLEWPVRTI---SFSHTGDYIASASEDLFIDISNVH 242
V ++D L + LWD + + TK+ + + SFS G IA+AS D + + +
Sbjct: 362 VSASDDLQLILWDPQKS--TKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGK 419
Query: 243 TGRTVHQIPCR-AAMNSVEWNPKYNLLAYAGDD 274
TG+ + + AA+ W+ LL + D
Sbjct: 420 TGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQD 452
Score = 43 (20.2 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 177 AID--PMGRYFAVGSADSLVSLW 197
A+D P G+ A G AD V +W
Sbjct: 478 AVDWSPDGQRVASGGADKAVRIW 500
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 165 (63.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 38/99 (38%), Positives = 57/99 (57%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R +TGH+ V S+A++ G LAS DQ ++W + G + ELRGH D++ L
Sbjct: 458 RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDL---ASGTLYK-ELRGHTDNITSLT 513
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI 112
+ P + L+A+AS D +VR+WD RS CS A+ S +
Sbjct: 514 FSPD-SSLVASASMDNSVRVWDIRSSHCSTPADGSSSEL 551
Score = 152 (58.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 36/126 (28%), Positives = 64/126 (50%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R Y GH V V ++ LA+GS D+T R+W + ++ GH V L
Sbjct: 416 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRL----FTGHRGPVLSLA 471
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDEL 132
+ P + +A+A D+ ++LWD SG ++ +NI ++T+ PD + +A + D+ +
Sbjct: 472 FSP-NGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSV 530
Query: 133 TILDVR 138
+ D+R
Sbjct: 531 RVWDIR 536
Score = 136 (52.9 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 32/103 (31%), Positives = 52/103 (50%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
C+ P Y A GS D V LW + VR FT PV +++FS G Y+ASA ED
Sbjct: 427 CVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ 486
Query: 235 FIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGDDKN 276
+ + ++ +G ++ + S+ ++P +L+A A D +
Sbjct: 487 RLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNS 529
Score = 128 (50.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 35/124 (28%), Positives = 60/124 (48%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-RGHADSVDQLCW 74
Y GH V + + AS S D+TAR+W + + + + GH VD + +
Sbjct: 376 YQGHAYPVWDLDISPHSLYFASASHDRTARLWSFD-----RTYPLRIYAGHLADVDCVKF 430
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDELT 133
P +++ +AT S DKTVRLW + G + G +++ + P+G ++A D L
Sbjct: 431 HP-NSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLK 489
Query: 134 ILDV 137
+ D+
Sbjct: 490 LWDL 493
Score = 87 (35.7 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 33/114 (28%), Positives = 51/114 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-RGHADSVDQLCWDP 76
GH V+S + + L S S D + R W + G + L +GHA V L P
Sbjct: 336 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-----GSFTNTVLYQGHAYPVWDLDISP 390
Query: 77 KHADLIATASGDKTVRLWDA-RSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
H+ A+AS D+T RLW R+ A + + + P+ ++A G+ D
Sbjct: 391 -HSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTD 443
Score = 84 (34.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 25/91 (27%), Positives = 40/91 (43%)
Query: 157 WN-MTGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+ G L TG+ G +A P G+Y A D + LWD++ +
Sbjct: 449 WSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN 508
Query: 215 VRTISFSHTGDYIASASEDLFI---DISNVH 242
+ +++FS +ASAS D + DI + H
Sbjct: 509 ITSLTFSPDSSLVASASMDNSVRVWDIRSSH 539
Score = 44 (20.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 157 WNM-TGEMFFLTTGNA-GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC 204
W++ +G ++ G+ + P A S D+ V +WDI C
Sbjct: 491 WDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHC 540
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 180 (68.4 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 42/107 (39%), Positives = 62/107 (57%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V SVA++ G LASGS D+T R+W +P G ++ LRGH+D+V + + P
Sbjct: 777 GHSNWVRSVAFSPDGRLLASGSFDKTVRLW--DP-ATGSLQQT-LRGHSDTVRSVAFSPD 832
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIA 124
L+A+ S DKTVRLWD +G Q + G + + DG++I+
Sbjct: 833 -GRLLASGSFDKTVRLWDPATGTLQQTLIIKGTVTELQFSQDGSYIS 878
Score = 175 (66.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 44/120 (36%), Positives = 67/120 (55%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V SVA++ G LASGS D+T R+W +P G ++ LRGH++ V + + P
Sbjct: 735 GHSGWVLSVAFSPDGRLLASGSFDKTVRLW--DP-ATGSLQQT-LRGHSNWVRSVAFSPD 790
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTILD 136
L+A+ S DKTVRLWD +G Q + + ++ + PDG +A G+ D + + D
Sbjct: 791 -GRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWD 849
Score = 138 (53.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 40/111 (36%), Positives = 59/111 (53%)
Query: 29 NCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD 88
N LASGS D+T R+W +P G ++ L GH+ V + + P L+A+ S D
Sbjct: 704 NSVWAVLASGSDDETVRLW--DP-ATGSLQQT-LEGHSGWVLSVAFSPD-GRLLASGSFD 758
Query: 89 KTVRLWDARSGKCSQQAELSGENI---NITYKPDGTHIAVGNRDDELTILD 136
KTVRLWD +G S Q L G + ++ + PDG +A G+ D + + D
Sbjct: 759 KTVRLWDPATG--SLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWD 807
Score = 104 (41.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINITYKPDG 120
L GH++SV W ++A+ S D+TVRLWD +G Q E SG +++ + PDG
Sbjct: 699 LEGHSNSV----WA-----VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDG 749
Query: 121 THIAVGNRDDELTILD 136
+A G+ D + + D
Sbjct: 750 RLLASGSFDKTVRLWD 765
Score = 92 (37.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 30/95 (31%), Positives = 45/95 (47%)
Query: 157 WN-MTGEMFFLTTGNAGCY-CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+ TG + G++ +A P GR A GS D V LWD + +T
Sbjct: 764 WDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDT 823
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQ 249
VR+++FS G +AS S D + + + TG T+ Q
Sbjct: 824 VRSVAFSPDGRLLASGSFDKTVRLWDPATG-TLQQ 857
>UNIPROTKB|Q3ZCC9 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9913 "Bos
taurus" [GO:0031080 "nuclear pore outer ring" evidence=ISS]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0012507 GO:GO:0000776 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0051028 GO:GO:0031080 EMBL:BC102514
IPI:IPI00691005 RefSeq:NP_001069033.1 UniGene:Bt.62595
ProteinModelPortal:Q3ZCC9 SMR:Q3ZCC9 STRING:Q3ZCC9 PRIDE:Q3ZCC9
Ensembl:ENSBTAT00000023702 GeneID:512530 KEGG:bta:512530 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 InParanoid:Q3ZCC9 KO:K14004 OMA:IKLWKEE
OrthoDB:EOG40P471 NextBio:20870435 Uniprot:Q3ZCC9
Length = 322
Score = 172 (65.6 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 76/292 (26%), Positives = 136/292 (46%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW-D 75
T H+ +H + GT+LA+ S D++ +++ + +G G++ +LRGH V Q+ W
Sbjct: 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVR-NG-GQILVADLRGHEGPVWQVAWAH 67
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN--IN-ITYKPD--GTHIAVGNRDD 130
P + +++A+ S D+ V +W +G + E +G + +N + + P G +A G+ D
Sbjct: 68 PMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDG 127
Query: 131 ELTIL--------DVRKFKPIHRRKFGYEVNEIAWN---MTGEMFFLTTGNAGCYCIAID 179
+++L +V+K H G N ++W + G + +G Y
Sbjct: 128 AISLLTYTGLGQWEVKKINNAHT--IG--CNAVSWAPAVVPGSLIDQPSGQKPNYI---- 179
Query: 180 PMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE----WPVRTISFSHT-G---DYIASAS 231
+ FA G D+L+ LW E + KLE W VR ++++ + G IAS S
Sbjct: 180 ---KKFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDW-VRDVAWAPSIGLPTSTIASCS 235
Query: 232 ED--LFIDISNVHTGRTVHQIPCRAAMNSVEWNPKY----NLLAYAGDDKNK 277
+D +F+ + +G T N V W+ + N+LA +G D NK
Sbjct: 236 QDGRVFVWTCDDASGNTWSP-KLLHKFNDVVWHVSWSITANILAVSGGD-NK 285
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 147 (56.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 65/252 (25%), Positives = 105/252 (41%)
Query: 32 GTKLASGSVDQTARVWHI--EPHGHGKVKDI-----ELRGHADSVDQLCWDPKHADLIAT 84
G L S +V+ T +V I +P +V+ + L GH+++V + + P +A+
Sbjct: 25 GKTLESQAVE-TEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPT-GKYLAS 82
Query: 85 ASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDVRKFK 141
SGD TVR WD + + G ++I++ PDG +A G ++ ++ + D K
Sbjct: 83 GSGDTTVRFWDLSTE--TPHFTCQGHRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGK 140
Query: 142 PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISE 201
+ R G+ W +TG + N C RY A S D V +WD +
Sbjct: 141 QVGRVLAGHS----KW-ITGLSWEPLHANPEC---------RYMASSSKDGSVRVWDTTA 186
Query: 202 MLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEW 261
C R T V + + G + SAS+D I + H G + CR W
Sbjct: 187 GRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDG-----VLCRTLQGHGHW 240
Query: 262 NPKYNLLAYAGD 273
N +A + D
Sbjct: 241 ---VNTMALSTD 249
Score = 142 (55.0 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 38/122 (31%), Positives = 67/122 (54%)
Query: 2 GESSIPFKNLHSR--EYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKV 57
G++++ F +L + +T GH+ V S++W+ G LASG + +W +P GK
Sbjct: 85 GDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLASGCKNGQILLW--DP-STGKQ 141
Query: 58 KDIELRGHADSVDQLCWDPKHAD----LIATASGDKTVRLWDARSGKCSQQAELSGENIN 113
L GH+ + L W+P HA+ +A++S D +VR+WD +G+C + L+G +
Sbjct: 142 VGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERI--LTGHTQS 199
Query: 114 IT 115
+T
Sbjct: 200 VT 201
Score = 142 (55.0 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 37/121 (30%), Positives = 63/121 (52%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
TGH+ ++ V ++ +AS S D++ ++W GK LRGH +V Q+ W
Sbjct: 320 TGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT---GKYL-ASLRGHVAAVYQIAWSA 375
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSG---ENINITYKPDGTHIAVGNRDDELT 133
+ L+ + S D T+++WD ++ K + A+L G E + + PDG +A G +D L
Sbjct: 376 D-SRLLVSGSSDSTLKVWDVKAQKLA--ADLPGHADEVYAVDWSPDGQRVASGGKDKCLR 432
Query: 134 I 134
I
Sbjct: 433 I 433
Score = 125 (49.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V+ +AW+ L SGS D T +VW ++ K+ +L GHAD V + W P
Sbjct: 363 GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ---KLA-ADLPGHADEVYAVDWSPD 418
Query: 78 HADLIATASGDKTVRLW 94
+A+ DK +R+W
Sbjct: 419 -GQRVASGGKDKCLRIW 434
Score = 123 (48.4 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 41/134 (30%), Positives = 65/134 (48%)
Query: 34 KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRL 93
+L SGS D T +W P K + GH ++Q+ + P + +IA+AS DK+++L
Sbjct: 294 RLVSGSDDFTLFMW--SP-AEDKKPLARMTGHQALINQVLFSPD-SRIIASASFDKSIKL 349
Query: 94 WDARSGKCSQQAELSGENI---NITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY 150
WD R+GK A L G I + D + G+ D L + DV+ K + G+
Sbjct: 350 WDGRTGK--YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK-LAADLPGH 406
Query: 151 --EVNEIAWNMTGE 162
EV + W+ G+
Sbjct: 407 ADEVYAVDWSPDGQ 420
Score = 112 (44.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 32/85 (37%), Positives = 41/85 (48%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH + V SVA++ TG LASGS D T R W + + +GH V + W P
Sbjct: 63 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST----ETPHFTCQGHRHWVLSISWSPD 118
Query: 78 HADLIATASGDKT--VRLWDARSGK 100
L ASG K + LWD +GK
Sbjct: 119 GKTL---ASGCKNGQILLWDPSTGK 140
Score = 75 (31.5 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 24/101 (23%), Positives = 41/101 (40%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+ P R A S D + LWD + + V I++S + S S D
Sbjct: 329 VLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDST 388
Query: 236 IDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDK 275
+ + +V + +P A + +V+W+P +A G DK
Sbjct: 389 LKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDK 429
Score = 68 (29.0 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 21/79 (26%), Positives = 32/79 (40%)
Query: 157 WN-MTGEMFFLTTGN-AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+ TG+ G+ A Y IA R GS+DS + +WD+
Sbjct: 350 WDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADE 409
Query: 215 VRTISFSHTGDYIASASED 233
V + +S G +AS +D
Sbjct: 410 VYAVDWSPDGQRVASGGKD 428
Score = 59 (25.8 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 23/89 (25%), Positives = 38/89 (42%)
Query: 188 GSADSLVSLWDISE-MLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
GS D + +W +E + T + + + FS IASAS D I + + TG+
Sbjct: 298 GSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKY 357
Query: 247 VHQIPCR-AAMNSVEWNPKYNLLAYAGDD 274
+ + AA+ + W+ LL D
Sbjct: 358 LASLRGHVAAVYQIAWSADSRLLVSGSSD 386
Score = 38 (18.4 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 174 YCIAIDPMGRYFAVGSADSLVSLW 197
Y + P G+ A G D + +W
Sbjct: 411 YAVDWSPDGQRVASGGKDKCLRIW 434
Score = 37 (18.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 253 RAAMNSVEWNPKYNLLAYAGDDKN 276
+A +N V ++P ++A A DK+
Sbjct: 323 QALINQVLFSPDSRIIASASFDKS 346
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 154 (59.3 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 47/165 (28%), Positives = 72/165 (43%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
H+ V ++ + T T LA+G + +VW I G RGH + LC+ KH
Sbjct: 102 HETPVITMTIDPTNTLLATGGAEGLVKVWDIA----GAYVTHSFRGHGGVISALCFG-KH 156
Query: 79 ADLIATASG--DKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
+ ASG D VRLWD S + E I +T++P G+ + G+RD + +
Sbjct: 157 QNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVW 216
Query: 136 DVRKFKPIHRRKFGYEVNEIAW-NMTGEMFFLTTGNAGCYCIAID 179
+++K + + V I W N E L T G +A D
Sbjct: 217 NIKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWD 261
Score = 128 (50.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 52/236 (22%), Positives = 104/236 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-RGHADSVDQLCWDP 76
GH V ++ + G LA+G+ D T R+W++ + K I + GH SV + P
Sbjct: 362 GHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDN-VYKCIHVFTGHTASVTAVALGP 420
Query: 77 KHAD----LIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDEL 132
+ +A++S D+T++ ++ G +++ S + T K H D ++
Sbjct: 421 LDVNGYPTFLASSSQDRTLKRFNL--GSQLNKSDFSNRAV-WTIK---AH------DRDV 468
Query: 133 TILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNA-GCYCIAIDPMGRYFAVGSAD 191
+ V K I + ++ + TGE+ + G+ G + + +P R A GS D
Sbjct: 469 NAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGD 528
Query: 192 SLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTV 247
+ +W++ CV+T + + + G + SA+ D + + ++ +G V
Sbjct: 529 RTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECV 584
Score = 93 (37.8 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 22/84 (26%), Positives = 42/84 (50%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75
+ GH + + + TG+ L SGS D+T +VW+I+ V+ I + +++ +
Sbjct: 185 FEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRS--AVRTIPVFHSVEAIGWVNGQ 242
Query: 76 PKHADLIATASGDKTVRLWDARSG 99
P+ ++ TA + WD +SG
Sbjct: 243 PEEK-ILYTAGEGNLILAWDWKSG 265
Score = 68 (29.0 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 21/84 (25%), Positives = 32/84 (38%)
Query: 157 WNMTGEMFFLTT-GNAGCYCIAID-PMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
WN+ + T G+ G I G +AD LV +W +S CV T E
Sbjct: 534 WNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDR 593
Query: 215 VRTISFSHTGDYIASASEDLFIDI 238
V ++ G + S D + +
Sbjct: 594 VWALASRFDGSLLVSGGADAVVSV 617
Score = 52 (23.4 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 182 GRYFAVGSADSLVSLW-DISEMLCVRTFTKLEWPVRT----ISFSHTGDYIASASEDLFI 236
G G AD++VS+W D++E + +LE V +F T D+ + + L +
Sbjct: 603 GSLLVSGGADAVVSVWKDVTEEYIAKQAEELERRVEAEQLLSNFEQTEDWQQAIALALSL 662
Query: 237 D 237
D
Sbjct: 663 D 663
>MGI|MGI:99832 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=ISO] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=ISO] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:99832 GO:GO:0012507 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OMA:IKLWKEE OrthoDB:EOG40P471
EMBL:AK003354 EMBL:AK009755 EMBL:BC002128 IPI:IPI00133920
RefSeq:NP_077168.2 UniGene:Mm.29296 ProteinModelPortal:Q9D1M0
SMR:Q9D1M0 IntAct:Q9D1M0 STRING:Q9D1M0 PhosphoSite:Q9D1M0
REPRODUCTION-2DPAGE:Q9D1M0 PaxDb:Q9D1M0 PRIDE:Q9D1M0 DNASU:110379
Ensembl:ENSMUST00000032440 GeneID:110379 KEGG:mmu:110379
UCSC:uc009dhm.1 InParanoid:Q9D1M0 NextBio:363887 Bgee:Q9D1M0
CleanEx:MM_SEC13 Genevestigator:Q9D1M0
GermOnline:ENSMUSG00000030298 Uniprot:Q9D1M0
Length = 322
Score = 171 (65.3 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 77/292 (26%), Positives = 136/292 (46%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW-D 75
T H+ +H + GT+LA+ S D++ +++ + +G G++ +LRGH V Q+ W
Sbjct: 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVR-NG-GQILIADLRGHEGPVWQVAWAH 67
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN--IN-ITYKPD--GTHIAVGNRDD 130
P + +++A+ S D+ V +W +G + E SG + +N + + P G +A G+ D
Sbjct: 68 PMYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDG 127
Query: 131 ELTIL--------DVRKFKPIHRRKFGYEVNEIAWN---MTGEMFFLTTGNAGCYCIAID 179
+++L +V+K H G N ++W + G + +G Y
Sbjct: 128 AISLLTYTGEGQWEVKKINNAHT--IG--CNAVSWAPAVVPGSLIDQPSGQKPNYI---- 179
Query: 180 PMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE----WPVRTISFSHT-G---DYIASAS 231
+ FA G D+L+ LW E + KLE W VR ++++ + G IAS S
Sbjct: 180 ---KKFASGGCDNLIKLWREEEDGQWKEEQKLEAHSDW-VRDVAWAPSIGLPTSTIASCS 235
Query: 232 ED--LFIDISNVHTGRTVHQIPCRAAMNSVEWNPKY----NLLAYAGDDKNK 277
+D +FI + +G + N V W+ + N+LA +G D NK
Sbjct: 236 QDGRVFIWTCDDASGN-MWSPKLLHKFNDVVWHVSWSITANILAVSGGD-NK 285
>RGD|1359555 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0005635 "nuclear envelope" evidence=ISO]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031080 "nuclear
pore outer ring" evidence=ISO;ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0000776 "kinetochore" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1359555 GO:GO:0012507 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031 eggNOG:COG2319
GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:BC084705
IPI:IPI00364566 RefSeq:NP_001006979.1 UniGene:Rn.1553
ProteinModelPortal:Q5XFW8 SMR:Q5XFW8 STRING:Q5XFW8 PRIDE:Q5XFW8
Ensembl:ENSRNOT00000014377 GeneID:297522 KEGG:rno:297522
UCSC:RGD:1359555 InParanoid:Q5XFW8 NextBio:642376
Genevestigator:Q5XFW8 Uniprot:Q5XFW8
Length = 322
Score = 171 (65.3 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 77/292 (26%), Positives = 136/292 (46%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW-D 75
T H+ +H + GT+LA+ S D++ +++ + +G G++ +LRGH V Q+ W
Sbjct: 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVR-NG-GQILIADLRGHEGPVWQVAWAH 67
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN--IN-ITYKPD--GTHIAVGNRDD 130
P + +++A+ S D+ V +W +G + E SG + +N + + P G +A G+ D
Sbjct: 68 PMYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDG 127
Query: 131 ELTIL--------DVRKFKPIHRRKFGYEVNEIAWN---MTGEMFFLTTGNAGCYCIAID 179
+++L +V+K H G N ++W + G + +G Y
Sbjct: 128 AISLLTYTGEGQWEVKKINNAHT--IG--CNAVSWAPAVVPGSLIDQPSGQKPNYI---- 179
Query: 180 PMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE----WPVRTISFSHT-G---DYIASAS 231
+ FA G D+L+ LW E + KLE W VR ++++ + G IAS S
Sbjct: 180 ---KKFASGGCDNLIKLWREEEDGQWKEEQKLEAHSDW-VRDVAWAPSIGLPTSTIASCS 235
Query: 232 ED--LFIDISNVHTGRTVHQIPCRAAMNSVEWNPKY----NLLAYAGDDKNK 277
+D +FI + +G + N V W+ + N+LA +G D NK
Sbjct: 236 QDGRVFIWTCDDASGN-MWSPKLLHKFNDVVWHVSWSITANILAVSGGD-NK 285
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 173 (66.0 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 16 YTGHKKKVHSVAWNCTGTK-LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
+ GH+++ ++ W+ + LA+G + VW G KV L GH+ SV+ L W
Sbjct: 218 FGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGTWKVDQRPLAGHSQSVEDLQW 277
Query: 75 DPKHADLIATASGDKTVRLWDARSGK---CS---QQAELSGENINITYKPDGTHIAVGNR 128
P ++A+ S DKT+R+WD R+ C + A S N+ I++ + IA G
Sbjct: 278 SPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNV-ISWNRNEPFIASGGD 336
Query: 129 DDELTILDVRKF---KPIHRRKFGYE-VNEIAWNMTGEMFFLTTG 169
D L I D+R+F KPI K + + + W+ E L +G
Sbjct: 337 DGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWS-PAEATVLASG 380
Score = 113 (44.8 bits), Expect = 0.00099, P = 0.00098
Identities = 37/162 (22%), Positives = 68/162 (41%)
Query: 14 REYTGHKKKVHSVAWNCTGTK-LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
R GH + V + W+ LAS SVD+T R+W H V+ +
Sbjct: 263 RPLAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVI 322
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINIT---YKP-DGTHIAVGN 127
W+ ++ IA+ D + +WD R + + A +IT + P + T +A G
Sbjct: 323 SWN-RNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGG 381
Query: 128 RDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTG 169
DD++ + D+ K I + + ++ + ++ F+ G
Sbjct: 382 DDDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQG 423
Score = 38 (18.4 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 186 AVGSADSLVSLWDIS 200
A G D ++LWD++
Sbjct: 378 ASGGDDDQIALWDLA 392
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 170 (64.9 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 58/264 (21%), Positives = 113/264 (42%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-VKDIELRGHADSVDQLCWDP 76
GHK + + W G+++ S S D+T R W +E GK +K ++ H+ V+ C
Sbjct: 94 GHKNAILDLHWTSDGSQIVSASPDKTVRAWDVET---GKQIK--KMAEHSSFVNSCCPTR 148
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILD 136
+ LI + S D T +LWD R Q + +++ I G D+++ + D
Sbjct: 149 RGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWD 208
Query: 137 VRKFKPIHRRKFGYEVNEIAWNMTGE-MFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVS 195
+RK + + G++ +++ + + LT G C+ M Y + V
Sbjct: 209 LRKGEATMTLE-GHQDTITGMSLSPDGSYLLTNGMDNKLCVW--DMRPY---APQNRCVK 262
Query: 196 LWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRA- 254
+++ + + K W S G + + S D + I + + RT++++P
Sbjct: 263 IFEGHQHNFEKNLLKCSW-------SPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTG 315
Query: 255 AMNSVEWNPKYNLLAYAGDDKNKY 278
++N ++P ++ DKN Y
Sbjct: 316 SVNECVFHPTEPIIGSCSSDKNIY 339
Score = 156 (60.0 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 43/152 (28%), Positives = 76/152 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKD-IELRGHADSVDQLCWD 75
+GH V+++ +N GT +ASGS D+ +W + HG K+ + L+GH +++ L W
Sbjct: 50 SGHPSAVYTMKFNPAGTLIASGSHDREIFLWRV----HGDCKNFMVLKGHKNAILDLHWT 105
Query: 76 PKHADLIATASGDKTVRLWDARSGK-CSQQAELSGENINITYKPDGTHIAVGNRDDELTI 134
+ +++ AS DKTVR WD +GK + AE S + G + + DD
Sbjct: 106 SDGSQIVS-ASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAK 164
Query: 135 L-DVRKFKPIHRRKFGYEVNEIAWNMTGEMFF 165
L D+R+ I Y++ ++++ + F
Sbjct: 165 LWDMRQRGAIQTFPDKYQITAVSFSDAADKIF 196
Score = 120 (47.3 bits), Expect = 0.00010, P = 0.00010
Identities = 43/167 (25%), Positives = 73/167 (43%)
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILDV 137
AD I T D V++WD R G+ + E + I ++ PDG+++ D++L + D+
Sbjct: 192 ADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDM 251
Query: 138 RKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLW 197
R + P +R +E ++ N + C + P G GS+D +V +W
Sbjct: 252 RPYAPQNRCVKIFEGHQ--HNFEKNLL-------KC---SWSPDGTKVTAGSSDRMVHIW 299
Query: 198 DISEMLCVRTFTKLEWPVRTIS---FSHTGDYIASASEDLFIDISNV 241
D + RT KL +++ F T I S S D I + +
Sbjct: 300 DTTSR---RTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 131 (51.2 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 46/167 (27%), Positives = 79/167 (47%)
Query: 16 YTGHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
+TGHK +++++A + T T +A+G D A +W I G+G EL GH DSV L +
Sbjct: 66 FTGHKGELYALACSPTDATLVATGGGDDKAFLWKI---GNGDWA-AELPGHKDSVSCLAF 121
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELT 133
L+A+ D V+++DA SG + G I + + P G + G+ D L
Sbjct: 122 S-YDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLW 180
Query: 134 ILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDP 180
+ + K ++ G+ +N + T + + TG+ I +P
Sbjct: 181 MWNADKEAYLNMFS-GHNLNVTCGDFTPDGKLICTGSDDASLIVWNP 226
Score = 130 (50.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 37/133 (27%), Positives = 65/133 (48%)
Query: 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
E GHK V +A++ G LASG +D +++ G +K + L G ++ + W
Sbjct: 108 ELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASS---GTLKCV-LDGPGAGIEWVRW 163
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT---YKPDGTHIAVGNRDDE 131
P+ ++ S D ++ +W+A K + SG N+N+T + PDG I G+ D
Sbjct: 164 HPR-GHIVLAGSEDCSLWMWNA--DKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDAS 220
Query: 132 LTILDVRKFKPIH 144
L + + + + IH
Sbjct: 221 LIVWNPKTCESIH 233
Score = 85 (35.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 25/86 (29%), Positives = 37/86 (43%)
Query: 149 GYEVNEIAWNMTGEM-FFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRT 207
G + I W++ F+ G + +Y A G A+ VS+WD CV T
Sbjct: 306 GMDKKLIIWDLQHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHT 365
Query: 208 FTKLEWPVRTISFSHTGDYIASASED 233
+ + V+ IS S D+I S S D
Sbjct: 366 YHGHQDAVQAISVSTNTDFIVSVSVD 391
>UNIPROTKB|P55735 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9606 "Homo
sapiens" [GO:0051028 "mRNA transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=NAS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=NAS]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0000087 "M phase of
mitotic cell cycle" evidence=TAS] [GO:0000236 "mitotic
prometaphase" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=TAS] [GO:0012507 "ER to Golgi transport vesicle
membrane" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0043687 "post-translational protein
modification" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0048208 "COPII vesicle coating"
evidence=TAS] Reactome:REACT_11123 Reactome:REACT_17015
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0006886 GO:GO:0012507 GO:GO:0002474 Reactome:REACT_21300
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0019886
GO:GO:0005789 eggNOG:COG2319 GO:GO:0043687 GO:GO:0018279
GO:GO:0051028 GO:GO:0000236 GO:GO:0048208 GO:GO:0031080 PDB:3BG0
PDB:3BG1 PDBsum:3BG0 PDBsum:3BG1 CTD:6396 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:L09260
EMBL:BC002634 EMBL:BC006167 EMBL:BC091506 IPI:IPI00479141
RefSeq:NP_001129704.1 RefSeq:NP_899195.1 UniGene:Hs.166924
ProteinModelPortal:P55735 SMR:P55735 DIP:DIP-39091N IntAct:P55735
MINT:MINT-1154053 STRING:P55735 PhosphoSite:P55735 DMDM:50403748
PaxDb:P55735 PRIDE:P55735 DNASU:6396 Ensembl:ENST00000337354
Ensembl:ENST00000350697 GeneID:6396 KEGG:hsa:6396 UCSC:uc003bvl.3
GeneCards:GC03M010335 HGNC:HGNC:10697 HPA:HPA035292 MIM:600152
neXtProt:NX_P55735 PharmGKB:PA35620 InParanoid:P55735
EvolutionaryTrace:P55735 GenomeRNAi:6396 NextBio:24846
ArrayExpress:P55735 Bgee:P55735 CleanEx:HS_SEC13
Genevestigator:P55735 GermOnline:ENSG00000157020 Uniprot:P55735
Length = 322
Score = 169 (64.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 76/291 (26%), Positives = 136/291 (46%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW-D 75
T H+ +H + GT+LA+ S D++ +++ + +G G++ +LRGH V Q+ W
Sbjct: 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVR-NG-GQILIADLRGHEGPVWQVAWAH 67
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN--IN-ITYKPD--GTHIAVGNRDD 130
P + +++A+ S D+ V +W +G + E +G + +N + + P G +A G+ D
Sbjct: 68 PMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG 127
Query: 131 ELTIL--------DVRKFKPIHRRKFGYEVNEIAWN---MTGEMFFLTTGNAGCYCIAID 179
+++L +V+K H G N ++W + G + +G Y
Sbjct: 128 AISLLTYTGEGQWEVKKINNAHT--IG--CNAVSWAPAVVPGSLIDHPSGQKPNYI---- 179
Query: 180 PMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE----WPVRTISFSHT-G---DYIASAS 231
+ FA G D+L+ LW E + KLE W VR ++++ + G IAS S
Sbjct: 180 ---KRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDW-VRDVAWAPSIGLPTSTIASCS 235
Query: 232 ED--LFI---DISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNK 277
+D +FI D ++ +T + V W+ N+LA +G D NK
Sbjct: 236 QDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGD-NK 285
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 132 (51.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 41/167 (24%), Positives = 74/167 (44%)
Query: 4 SSIPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR 63
+++P +N H V SV ++ LAS S D T ++W G +++ L
Sbjct: 503 ATVPLQN----NLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTAT---GSLENT-LE 554
Query: 64 GHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGE-NINITYKPDGTH 122
GH D V+ + + P + L+A+AS D TV++W A +G + SG I++ +
Sbjct: 555 GHDDRVNSVSFSPD-SRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNL 613
Query: 123 IAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTG 169
+A D + I D+ + H +E+ I ++ + G
Sbjct: 614 LASAMDDGTVKIWDMEIYSLRHTFDLDHEIQRIQFDKSMSSLITNVG 660
Score = 119 (46.9 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 32/121 (26%), Positives = 59/121 (48%)
Query: 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
++ GH + V SV+++ LAS S D T ++W L GH + V + +
Sbjct: 258 QFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTAT----SFLQNTLEGHNEWVKSVVF 313
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELT 133
+ L+A+AS D TV++WD +G + + +++ ++ + D IA G+ D +
Sbjct: 314 S-HDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVR 372
Query: 134 I 134
I
Sbjct: 373 I 373
Score = 119 (46.9 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH V SV ++ +ASGS D+T R+W G ++ H DSV +
Sbjct: 341 RMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTT---GLLRHT-FEDHEDSVMAVS 396
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDEL 132
+ + +A+AS V++WD R+G E + +N +++ PD +A + D +
Sbjct: 397 F-AHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTV 455
Query: 133 TI 134
I
Sbjct: 456 KI 457
Score = 118 (46.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 36/119 (30%), Positives = 61/119 (51%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V+SV+++ LAS S D+T ++WH G ++ L GH D V + +
Sbjct: 429 GHDDCVNSVSFSPDSRLLASASDDRTVKIWHAAT---GSLQRT-LEGHNDWVRSVVFS-H 483
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENI--NITYKPDGTHIAVGNRDDELTI 134
+ LIA+AS D TV++WD + E S +N ++ + D +A + D++T+
Sbjct: 484 DSRLIASASDDMTVKIWDTATVPLQNNLE-SHDNWVRSVVFSHDSRLLA--SASDDMTV 539
Score = 113 (44.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 31/94 (32%), Positives = 47/94 (50%)
Query: 183 RYFAVGSADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYIASASEDLFIDISNV 241
R A S D V +WD + + + W VR++ FSH +ASAS+D+ + I +
Sbjct: 486 RLIASASDDMTVKIWDTATVPLQNNLESHDNW-VRSVVFSHDSRLLASASDDMTVKIWDT 544
Query: 242 HTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDD 274
TG + + +NSV ++P LLA A DD
Sbjct: 545 ATGSLENTLEGHDDRVNSVSFSPDSRLLASASDD 578
Score = 107 (42.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 36/122 (29%), Positives = 56/122 (45%)
Query: 157 WNM-TGEMFFLTTGNAGCY-CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEW 213
W+ TG + + G+ C ++ P R A S D V +W + RT +W
Sbjct: 416 WDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDW 475
Query: 214 PVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAG 272
VR++ FSH IASAS+D+ + I + T + + + SV ++ LLA A
Sbjct: 476 -VRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASAS 534
Query: 273 DD 274
DD
Sbjct: 535 DD 536
Score = 87 (35.7 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 31/94 (32%), Positives = 43/94 (45%)
Query: 183 RYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVH 242
R A S D V +WD + T + V ++SFS +ASAS+D + I
Sbjct: 528 RLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAA 587
Query: 243 TGRTVHQIPC--RAAMNSVEWNPKYNLLAYAGDD 274
TG H R A+ S+ ++ NLLA A DD
Sbjct: 588 TGTVQHTFDGSGRVAI-SLAFSHTSNLLASAMDD 620
Score = 71 (30.1 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
++ P R A S D V +W + TF +++FSHT + +ASA +D
Sbjct: 563 VSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDD 620
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 167 (63.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 45/142 (31%), Positives = 74/142 (52%)
Query: 8 FKNLHS-REYTGHKK-KVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH 65
F N S + TGH +V VA++ +G LA+ D + R+W +E K + + GH
Sbjct: 339 FNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQ----KTEVLHQEGH 394
Query: 66 ADSVDQLCWDPKHAD--LIATASGDKTVRLWDARSGKCSQQAELS-GENINITYKPDGTH 122
A V L + H+D ++ T D R+WD R+G+C E G + + P+G H
Sbjct: 395 AKPVHCLSY---HSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFH 451
Query: 123 IAVGNRDDELTILDVRKFKPIH 144
IA G++D+ I D+R+ +P++
Sbjct: 452 IATGSQDNTCKIWDLRRRQPVY 473
Score = 45 (20.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 12/52 (23%), Positives = 21/52 (40%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
G + S DS +W ++T + V ++ + YIA+ S D
Sbjct: 492 GSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFD 543
Score = 38 (18.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLW 197
+ I P +Y A S D LW
Sbjct: 528 VDIAPNSQYIATTSFDRTFKLW 549
>ZFIN|ZDB-GENE-040426-2649 [details] [associations]
symbol:sec13 "SEC13 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0055123 "digestive system development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0070971 "endoplasmic reticulum exit site" evidence=IDA]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=ISS] [GO:0070278
"extracellular matrix constituent secretion" evidence=IMP]
[GO:0005622 "intracellular" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-2649
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0001889 GO:GO:0051216
GO:GO:0006888 GO:GO:0007029 GO:GO:0055123 GO:GO:0070278
GO:GO:0070971 CTD:6396 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 HOVERGEN:HBG057343 KO:K14004 EMBL:BX537350
EMBL:BC054585 EMBL:BC153483 EMBL:CT027575 IPI:IPI00513236
RefSeq:NP_998500.1 UniGene:Dr.5496 STRING:Q7T2E1
Ensembl:ENSDART00000077063 GeneID:798071 KEGG:dre:798071
InParanoid:Q7T2E1 OMA:ISWAPAT NextBio:20933269 Uniprot:Q7T2E1
Length = 320
Score = 168 (64.2 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 77/292 (26%), Positives = 134/292 (45%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW-D 75
T H+ +H + GT+LA+ S D++ +++ ++ +G G++ +LRGH V Q+ W
Sbjct: 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVK-NG-GQILVADLRGHEGPVWQVAWAH 67
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN--IN-ITYKP-D-GTHIAVGNRDD 130
P + +++A+ S D+ V +W + + E +G + +N + + P D G +A G+ D
Sbjct: 68 PMYGNILASCSYDRKVIIWKEENSTWDKMYEYTGHDSSVNSVCWGPYDFGLILACGSSDG 127
Query: 131 ELTIL--------DVRKFKPIHRRKFGYEVNEIAWN---MTGEMFFLTTGNAGCYCIAID 179
+++L D++K H G N ++W + G + TG Y
Sbjct: 128 AISVLTCSGDGHWDIKKINNAHT--IG--CNAVSWAPAVVPGSLIEQPTGQKPNYI---- 179
Query: 180 PMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE----WPVRTISFSHT-G---DYIASAS 231
+ F G D+LV LW + + KLE W VR + ++ + G IAS S
Sbjct: 180 ---KRFVSGGCDNLVKLWKEEDGQW-KEDQKLEAHSDW-VRDVGWAPSIGLPTSTIASCS 234
Query: 232 ED--LFIDISNVHTGRTVHQIPCRAAMNSVEWNPKY----NLLAYAGDDKNK 277
+D +FI + G T N V W+ + N+LA +G D NK
Sbjct: 235 QDGRVFIWTCDDPAGNT-WTAKLLHKFNDVVWHVSWSITGNILAVSGGD-NK 284
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 163 (62.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 67/242 (27%), Positives = 105/242 (43%)
Query: 15 EYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
E+T GHK ++ VAW+ G AS D+ R+W + + G K I GH ++ ++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWG-TKTILSDGHKRTIREI 65
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG-ENI--NITYKPDGTHIAVGNRD 129
W P +A+AS D T +W SG+ A L G EN ++++ G +A +RD
Sbjct: 66 RWSPC-GQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
Query: 130 DELTILDVR---KFK-PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYF 185
+ I +V +F+ +V + W+ T ++ L + + Y D + F
Sbjct: 125 KSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDV--LASAS---Y----DNTIKMF 175
Query: 186 AVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNV-HTG 244
A D+ WD C T T V I F G+ + S S+D I I H G
Sbjct: 176 AEEPIDND---WD-----CTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPG 227
Query: 245 RT 246
T
Sbjct: 228 NT 229
Score = 41 (19.5 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 256 MNSVEWNP 263
+NSV+WNP
Sbjct: 306 VNSVQWNP 313
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 137 (53.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 34/123 (27%), Positives = 63/123 (51%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHG-HGKVKDIELRGHADSVDQL 72
+ TGH++ V+ V ++ G +AS S D++ R+W+ G G+ + RGH V Q+
Sbjct: 354 KRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN----GITGQFVTV-FRGHVGPVYQV 408
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDE 131
W + L+ + S D T+++W+ R+ K Q + + + + PDG + G +D
Sbjct: 409 SWSAD-SRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRV 467
Query: 132 LTI 134
L +
Sbjct: 468 LKL 470
Score = 126 (49.4 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 50/180 (27%), Positives = 84/180 (46%)
Query: 2 GESSIPFKNLHSRE--YT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKV 57
G++++ +L++ +T GHK V +VAW+ G L SGS W+ P G++
Sbjct: 129 GDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWN--PK-KGEL 185
Query: 58 KDIELRGHADSVDQLCWDPKHADL----IATASGDKTVRLWDARSGKCSQQAELSGENIN 113
+ L GH + + W+P H T+S D R+WD K LSG +
Sbjct: 186 EGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSI--ICLSGHTLA 243
Query: 114 IT---YKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTG 169
+T + DG I G++D + + + + K I K G+ +N +A ++ E + L TG
Sbjct: 244 VTCVKWGGDGI-IYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLA--LSTE-YVLRTG 299
Score = 124 (48.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 26/79 (32%), Positives = 41/79 (51%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75
+ GH V+ V+W+ L SGS D T ++W I K+K +L GHAD V + W
Sbjct: 398 FRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTK---KLKQ-DLPGHADEVFAVDWS 453
Query: 76 PKHADLIATASGDKTVRLW 94
P + + + D+ ++LW
Sbjct: 454 PD-GEKVVSGGKDRVLKLW 471
Score = 100 (40.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 10 NLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
N S+ GH + V V+++ G +LASGS D T R+W + + + +GH + V
Sbjct: 99 NRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDL----YTETPLFTCKGHKNWV 154
Query: 70 DQLCWDPKHADLIA-TASGDKTVRLWDARSGKCSQQAELSGENINIT 115
+ W P L++ + SG+ + W+ + G+ + + L+G IT
Sbjct: 155 LTVAWSPDGKHLVSGSKSGE--ICCWNPKKGEL-EGSPLTGHKKWIT 198
Score = 90 (36.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 26/101 (25%), Positives = 44/101 (43%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+ P G++ A S D V LW+ V F PV +S+S + S S+D
Sbjct: 366 VYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDST 425
Query: 236 IDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDK 275
+ I + T + +P A + +V+W+P + G D+
Sbjct: 426 LKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDR 466
Score = 66 (28.3 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 19/79 (24%), Positives = 34/79 (43%)
Query: 157 WN-MTGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
WN +TG+ + G+ G Y ++ R GS DS + +W+I +
Sbjct: 387 WNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADE 446
Query: 215 VRTISFSHTGDYIASASED 233
V + +S G+ + S +D
Sbjct: 447 VFAVDWSPDGEKVVSGGKD 465
Score = 62 (26.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 26/89 (29%), Positives = 37/89 (41%)
Query: 188 GSADSLVSLWDIS-EMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
GS D + LW+ S + T + V + FS G +IASAS D + + N TG+
Sbjct: 335 GSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQF 394
Query: 247 VHQIPCRAA-MNSVEWNPKYNLLAYAGDD 274
V + V W+ LL D
Sbjct: 395 VTVFRGHVGPVYQVSWSADSRLLLSGSKD 423
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 143 (55.4 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 64/252 (25%), Positives = 107/252 (42%)
Query: 32 GTKLASGSVDQTARVWHI--EPHGHGKVKDI-----ELRGHADSVDQLCWDPKHADLIAT 84
G L S SV+ T ++ I +P +V+ + L GH+++V + + P +A+
Sbjct: 74 GKTLESQSVE-TEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPT-GKYLAS 131
Query: 85 ASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDVRKFK 141
SGD TVR WD + + G ++I++ PDG +A G ++ ++ + D
Sbjct: 132 GSGDTTVRFWDLSTE--TPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWD----- 184
Query: 142 PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISE 201
P G +V +TG ++T + ++P RY A S D V +WD +
Sbjct: 185 P----STGLQVGR---TLTGHSKWIT--GLSWEPLHMNPECRYVASSSKDGSVRVWDTTA 235
Query: 202 MLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEW 261
C R T V + + G + SAS+D I + H G + CR W
Sbjct: 236 GRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDG-----VLCRTLQGHGHW 289
Query: 262 NPKYNLLAYAGD 273
N +A + D
Sbjct: 290 ---VNTMALSTD 298
Score = 140 (54.3 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 37/122 (30%), Positives = 66/122 (54%)
Query: 2 GESSIPFKNLHSR--EYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKV 57
G++++ F +L + +T GH+ V S++W+ G KLASG + +W +P G
Sbjct: 134 GDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLW--DP-STGLQ 190
Query: 58 KDIELRGHADSVDQLCWDPKHAD----LIATASGDKTVRLWDARSGKCSQQAELSGENIN 113
L GH+ + L W+P H + +A++S D +VR+WD +G+C + L+G +
Sbjct: 191 VGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERI--LTGHTQS 248
Query: 114 IT 115
+T
Sbjct: 249 VT 250
Score = 137 (53.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 33/119 (27%), Positives = 60/119 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
TGH+ ++ V ++ +AS S D++ ++W GK LRGH +V Q+ W
Sbjct: 369 TGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT---GKYL-ASLRGHVAAVYQIAWSA 424
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTI 134
+ L+ + S D T+++WD ++ K + + + + + PDG +A G +D L I
Sbjct: 425 D-SRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRI 482
Score = 125 (49.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V+ +AW+ L SGS D T +VW ++ K+ +L GHAD V + W P
Sbjct: 412 GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ---KLAT-DLPGHADEVYAVDWSPD 467
Query: 78 HADLIATASGDKTVRLW 94
+A+ DK +R+W
Sbjct: 468 -GQRVASGGKDKCLRIW 483
Score = 122 (48.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 34 KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRL 93
+L SGS D T +W P K + GH ++Q+ + P + ++A+AS DK+++L
Sbjct: 343 RLVSGSDDFTLFLW--SP-AEDKKPLARMTGHQALINQVLFSPD-SRIVASASFDKSIKL 398
Query: 94 WDARSGKCSQQAELSGENI---NITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY 150
WD R+GK A L G I + D + G+ D L + DV+ K + G+
Sbjct: 399 WDGRTGK--YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK-LATDLPGH 455
Query: 151 --EVNEIAWNMTGE 162
EV + W+ G+
Sbjct: 456 ADEVYAVDWSPDGQ 469
Score = 110 (43.8 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 40/129 (31%), Positives = 57/129 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH + V SVA++ TG LASGS D T R W + + +GH V + W P
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST----ETPHFTCKGHRHWVLSISWSPD 167
Query: 78 HADLIATASGDKT--VRLWDARSGKCSQQAELSGENINIT--------YKPDGTHIAVGN 127
L ASG K V LWD +G L+G + IT P+ ++A +
Sbjct: 168 GKKL---ASGCKNGQVLLWDPSTG-LQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSS 223
Query: 128 RDDELTILD 136
+D + + D
Sbjct: 224 KDGSVRVWD 232
Score = 74 (31.1 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 24/101 (23%), Positives = 41/101 (40%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+ P R A S D + LWD + + V I++S + S S D
Sbjct: 378 VLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDST 437
Query: 236 IDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDK 275
+ + +V + +P A + +V+W+P +A G DK
Sbjct: 438 LKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDK 478
Score = 68 (29.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 21/79 (26%), Positives = 32/79 (40%)
Query: 157 WN-MTGEMFFLTTGN-AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+ TG+ G+ A Y IA R GS+DS + +WD+
Sbjct: 399 WDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADE 458
Query: 215 VRTISFSHTGDYIASASED 233
V + +S G +AS +D
Sbjct: 459 VYAVDWSPDGQRVASGGKD 477
Score = 60 (26.2 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 23/89 (25%), Positives = 38/89 (42%)
Query: 188 GSADSLVSLWDISE-MLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
GS D + LW +E + T + + + FS +ASAS D I + + TG+
Sbjct: 347 GSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKY 406
Query: 247 VHQIPCR-AAMNSVEWNPKYNLLAYAGDD 274
+ + AA+ + W+ LL D
Sbjct: 407 LASLRGHVAAVYQIAWSADSRLLVSGSSD 435
Score = 38 (18.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 174 YCIAIDPMGRYFAVGSADSLVSLW 197
Y + P G+ A G D + +W
Sbjct: 460 YAVDWSPDGQRVASGGKDKCLRIW 483
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 143 (55.4 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 64/252 (25%), Positives = 107/252 (42%)
Query: 32 GTKLASGSVDQTARVWHI--EPHGHGKVKDI-----ELRGHADSVDQLCWDPKHADLIAT 84
G L S SV+ T ++ I +P +V+ + L GH+++V + + P +A+
Sbjct: 76 GKTLESQSVE-TEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPT-GKYLAS 133
Query: 85 ASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDVRKFK 141
SGD TVR WD + + G ++I++ PDG +A G ++ ++ + D
Sbjct: 134 GSGDTTVRFWDLSTE--TPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWD----- 186
Query: 142 PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISE 201
P G +V +TG ++T + ++P RY A S D V +WD +
Sbjct: 187 P----STGTQVGR---TLTGHSKWIT--GLSWEPLHMNPECRYVASSSKDGSVRVWDTTA 237
Query: 202 MLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEW 261
C R T V + + G + SAS+D I + H G + CR W
Sbjct: 238 GRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDG-----VLCRTLQGHGHW 291
Query: 262 NPKYNLLAYAGD 273
N +A + D
Sbjct: 292 ---VNTMALSTD 300
Score = 140 (54.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 37/122 (30%), Positives = 66/122 (54%)
Query: 2 GESSIPFKNLHSR--EYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKV 57
G++++ F +L + +T GH+ V S++W+ G KLASG + +W +P G
Sbjct: 136 GDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLW--DP-STGTQ 192
Query: 58 KDIELRGHADSVDQLCWDPKHAD----LIATASGDKTVRLWDARSGKCSQQAELSGENIN 113
L GH+ + L W+P H + +A++S D +VR+WD +G+C + L+G +
Sbjct: 193 VGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERI--LTGHTQS 250
Query: 114 IT 115
+T
Sbjct: 251 VT 252
Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/119 (27%), Positives = 60/119 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
TGH+ ++ V ++ +AS S D++ ++W GK LRGH +V Q+ W
Sbjct: 371 TGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT---GKYL-ASLRGHVAAVYQIAWSA 426
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTI 134
+ L+ + S D T+++WD ++ K + + + + + PDG +A G +D L I
Sbjct: 427 D-SRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRI 484
Score = 125 (49.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V+ +AW+ L SGS D T +VW ++ K+ +L GHAD V + W P
Sbjct: 414 GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ---KLTT-DLPGHADEVYAVDWSPD 469
Query: 78 HADLIATASGDKTVRLW 94
+A+ DK +R+W
Sbjct: 470 -GQRVASGGKDKCLRIW 485
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 34 KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRL 93
+L SGS D T +W P K + GH ++Q+ + P + ++A+AS DK+++L
Sbjct: 345 RLVSGSDDFTLFLW--SP-AEDKKPLARMTGHQALINQVLFSPD-SRIVASASFDKSIKL 400
Query: 94 WDARSGKCSQQAELSGENI---NITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY 150
WD R+GK A L G I + D + G+ D L + DV+ K + G+
Sbjct: 401 WDGRTGK--YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK-LTTDLPGH 457
Query: 151 --EVNEIAWNMTGE 162
EV + W+ G+
Sbjct: 458 ADEVYAVDWSPDGQ 471
Score = 109 (43.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 39/129 (30%), Positives = 58/129 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH + V SVA++ TG LASGS D T R W + + +GH V + W P
Sbjct: 114 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST----ETPHFTCKGHRHWVLSISWSPD 169
Query: 78 HADLIATASGDKT--VRLWDARSGKCSQQAELSGENINIT--------YKPDGTHIAVGN 127
L ASG K + LWD +G + L+G + IT P+ ++A +
Sbjct: 170 GKKL---ASGCKNGQILLWDPSTGTQVGRT-LTGHSKWITGLSWEPLHMNPECRYVASSS 225
Query: 128 RDDELTILD 136
+D + + D
Sbjct: 226 KDGSVRVWD 234
Score = 74 (31.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 24/101 (23%), Positives = 41/101 (40%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+ P R A S D + LWD + + V I++S + S S D
Sbjct: 380 VLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDST 439
Query: 236 IDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDK 275
+ + +V + +P A + +V+W+P +A G DK
Sbjct: 440 LKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDK 480
Score = 68 (29.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 21/79 (26%), Positives = 32/79 (40%)
Query: 157 WN-MTGEMFFLTTGN-AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W+ TG+ G+ A Y IA R GS+DS + +WD+
Sbjct: 401 WDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADE 460
Query: 215 VRTISFSHTGDYIASASED 233
V + +S G +AS +D
Sbjct: 461 VYAVDWSPDGQRVASGGKD 479
Score = 60 (26.2 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 23/89 (25%), Positives = 38/89 (42%)
Query: 188 GSADSLVSLWDISE-MLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 246
GS D + LW +E + T + + + FS +ASAS D I + + TG+
Sbjct: 349 GSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKY 408
Query: 247 VHQIPCR-AAMNSVEWNPKYNLLAYAGDD 274
+ + AA+ + W+ LL D
Sbjct: 409 LASLRGHVAAVYQIAWSADSRLLVSGSSD 437
Score = 41 (19.5 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 157 WNMTGEMFFLTT---GNAG-CYCIAIDPMGRYFAVGSADSLVSLW 197
W++ + LTT G+A Y + P G+ A G D + +W
Sbjct: 443 WDVKAQK--LTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 153 (58.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 37/129 (28%), Positives = 64/129 (49%)
Query: 14 REYTGHKKKVHSVAWNC-TGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
+ + H K+V+SV WN T +GS DQ+ ++W+ P +K R H +
Sbjct: 98 KSFEEHTKEVYSVDWNLVTKDTFITGSWDQSIKIWN--PRMDRSLKTF--REHRYCIYSA 153
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITY---KPDGTHIAVGNRD 129
W P++A L A+ SGD+T+++WD+R + + I +T K + + G+ D
Sbjct: 154 IWSPRNAHLFASVSGDRTLKIWDSRDNRSLNTIKAHDHEI-LTCDWNKYNDKEVVTGSVD 212
Query: 130 DELTILDVR 138
+ I D+R
Sbjct: 213 KTIRIWDIR 221
Score = 51 (23.0 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 188 GSADSLVSLWDISEMLCVRTFTKLE-WPVRTISFS-HTGDYIASASEDLFI 236
GS D + +WDI T + + VR I S H+ +AS S D+ +
Sbjct: 209 GSVDKTIRIWDIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSV 259
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 162 (62.1 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 67/240 (27%), Positives = 105/240 (43%)
Query: 15 EYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
E+T GHK ++ VAW+ G AS D+ RVW + + K I GH ++ ++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWS-TKTILSDGHKRTIREI 65
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG-ENI--NITYKPDGTHIAVGNRD 129
W P +A+AS D T +W SG+ A L G EN ++++ G +A +RD
Sbjct: 66 RWSPC-GQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
Query: 130 DELTILDVR---KFK-PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYF 185
+ I +V +F+ +V + W+ T ++ L + + Y D + F
Sbjct: 125 KSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDI--LASAS---Y----DNTIKMF 175
Query: 186 AVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNV-HTG 244
A DS WD + L T T W +I F GD + S S+D + I H G
Sbjct: 176 AESQLDSD---WDCTATLSSHTSTV--W---SIDFDAEGDRLVSCSDDKTLKIWRAYHPG 227
Score = 41 (19.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 256 MNSVEWNP 263
+N+VEWNP
Sbjct: 306 VNAVEWNP 313
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 162 (62.1 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 67/240 (27%), Positives = 105/240 (43%)
Query: 15 EYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
E+T GHK ++ VAW+ G AS D+ RVW + + K I GH ++ ++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWS-TKTILSDGHKRTIREI 65
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG-ENI--NITYKPDGTHIAVGNRD 129
W P +A+AS D T +W SG+ A L G EN ++++ G +A +RD
Sbjct: 66 RWSPC-GQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
Query: 130 DELTILDVR---KFK-PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYF 185
+ I +V +F+ +V + W+ T ++ L + + Y D + F
Sbjct: 125 KSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDI--LASAS---Y----DNTIKMF 175
Query: 186 AVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNV-HTG 244
A DS WD + L T T W +I F GD + S S+D + I H G
Sbjct: 176 AESQLDSD---WDCTATLSSHTSTV--W---SIDFDAEGDRLVSCSDDKTLKIWRAYHPG 227
Score = 41 (19.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 256 MNSVEWNP 263
+N+VEWNP
Sbjct: 306 VNAVEWNP 313
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 127 (49.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 42/149 (28%), Positives = 71/149 (47%)
Query: 1 MGESSIPFKNLHSREYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK 58
MG+ +I +EY+ K + S+A++ G LASG++D ++ I GK+
Sbjct: 127 MGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT---GKLL 183
Query: 59 DIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---INIT 115
L GHA + L + P + L+ TAS D ++++D + + LSG +N+
Sbjct: 184 HT-LEGHAMPIRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLA--GTLSGHASWVLNVA 239
Query: 116 YKPDGTHIAVGNRDDELTILDVRKFKPIH 144
+ PD TH + D + + DV IH
Sbjct: 240 FCPDDTHFVSSSSDKSVKVWDVGTRTCIH 268
Score = 118 (46.6 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 42/129 (32%), Positives = 63/129 (48%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-VKDIELRGHADSVDQLCWDP 76
GH+ V SV + T AS S+D R+W +E +GK +K I+ G D+ L + P
Sbjct: 62 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE---NGKQMKSIDA-GPVDAWT-LAFSP 116
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTIL 135
L AT + V ++ SGK + G+ I +I Y PDG ++A G D + I
Sbjct: 117 DSQHL-ATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 136 DVRKFKPIH 144
D+ K +H
Sbjct: 176 DIATGKLLH 184
Score = 107 (42.7 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 42/165 (25%), Positives = 71/165 (43%)
Query: 14 REYTGHKKKVHSVAWNCTGTK-----LASGSVDQTARVWHIEPHGHGKVK-DIELRGHAD 67
++ H + SVAW T K + +GS+D +VW +++ L GH
Sbjct: 10 KQEQAHDDAIWSVAWE-TNKKENIETVVTGSLDDLVKVWKWRDE---RLELQWSLEGHQL 65
Query: 68 SVDQLCWDPKHADLIATASG-DKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAV 125
V + D H IA +S D +RLWD +GK + + + + + PD H+A
Sbjct: 66 GVVSV--DISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQHLAT 123
Query: 126 GNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTG 169
G ++ I V K + G + IA++ G+ +L +G
Sbjct: 124 GTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK--YLASG 166
Score = 104 (41.7 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
IA P G+Y A G+ D +++++DI+ + T P+R+++FS + +AS+D +
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 236 IDISNV 241
I I +V
Sbjct: 214 IKIYDV 219
Score = 82 (33.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+A P +F S+D V +WD+ C+ TF + V + ++ G I S +D
Sbjct: 238 VAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQE 297
Query: 236 IDI 238
I +
Sbjct: 298 IHV 300
>RGD|1582817 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1582817 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 CTD:5822 OrthoDB:EOG4R7V93 IPI:IPI00372838
RefSeq:NP_001162124.1 UniGene:Rn.208019 ProteinModelPortal:D3ZV54
PRIDE:D3ZV54 Ensembl:ENSRNOT00000001605 GeneID:690297
KEGG:rno:690297 UCSC:RGD:1582817 NextBio:740604 Uniprot:D3ZV54
Length = 920
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 57/205 (27%), Positives = 100/205 (48%)
Query: 14 REYTGHKKKVHS-VAWNCTGTKLASGSVDQ-TARVWHIEPHGHGKVKDIELRGHADSVDQ 71
R +T + S VA + +G +++G+ D VW ++ G++ D+ L GH +
Sbjct: 453 RTFTSPRPTQFSCVAVDSSGEIVSAGAQDSFEIFVWSMQT---GRLLDV-LSGHEGPISG 508
Query: 72 LCWDPKHADLIATASGDKTVRLWDA-RSGKCSQQAELSGENINITYKPDGTHIAVGNRDD 130
LC++P + ++A+AS DKTVRLWD S + + L+ + + +TY+PDG +AV +
Sbjct: 509 LCFNPMKS-ILASASWDKTVRLWDMFDSWRTKETLSLTSDVLAVTYRPDGAELAVATLNS 567
Query: 131 ELTILD------VRKFKPIHRRKFGY-EVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGR 183
++T D V + H K G E+++I + + TT C + D G+
Sbjct: 568 QITFWDPENAVQVGSIEGRHDLKTGRKELDKITAKHSAKGKAFTT-----VCYSAD--GQ 620
Query: 184 YFAVGSADSLVSLWDISEMLCVRTF 208
G V L+ + E + V+ F
Sbjct: 621 NILAGGMSKFVCLYHVREQILVKRF 645
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 167 (63.8 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 61/270 (22%), Positives = 114/270 (42%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GHK + + W+ + S S D T W IE G +++ GH + ++ +
Sbjct: 106 SGHKGAILDLQWSRDSKTIFSASADMTLASWDIES-GQ-RIR--RYIGHEEVINSVEISK 161
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILD 136
+ +++ +AS D T+ +WD R + E + G + G D+ + + D
Sbjct: 162 RGQEMLVSASDDGTMGIWDPRQKEAIDYLETELPITAVAQSEAGNEVFSGGIDNAIHVWD 221
Query: 137 VRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSL 196
+RK I ++M G M +T+ + + P + S DS V
Sbjct: 222 IRK-------------KAIVYSMAGHMDTITS-------LEVSPDSQTLLSNSFDSTVRT 261
Query: 197 WDISEMLC----VRTF----TKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVH 248
WDI +RT+ LE + S++ GD IA+ S D + + + TG+ ++
Sbjct: 262 WDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWDFKTGKILY 321
Query: 249 QIPC-RAAMNSVEWNPKYN-LLAYAGDDKN 276
++P + +N V + P ++ A D+N
Sbjct: 322 KLPGHKGTVNDVRFTPNNEPIIVSASSDRN 351
Score = 133 (51.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 60/222 (27%), Positives = 104/222 (46%)
Query: 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
E TGH +V +V ++ T +ASGS+D++ +W+ +G + I L GH ++ L W
Sbjct: 61 ELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNT--YGQCENYGI-LSGHKGAILDLQW 117
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDD-EL 132
+ + I +AS D T+ WD SG+ ++ E IN + G + V DD +
Sbjct: 118 S-RDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTM 176
Query: 133 TILDVRKFKPIHRRKFGYEVNEIAWNMTG-EMFFLTTGNAGCYCIAIDPMGRYFAV-GSA 190
I D R+ + I + + +A + G E+F NA + I +++ G
Sbjct: 177 GIWDPRQKEAIDYLETELPITAVAQSEAGNEVFSGGIDNA-IHVWDIRKKAIVYSMAGHM 235
Query: 191 DSLVSLWDIS---EMLCVRTF--TKLEWPVRTISFSHTGDYI 227
D++ SL ++S + L +F T W +R F+ T +I
Sbjct: 236 DTITSL-EVSPDSQTLLSNSFDSTVRTWDIRP--FAPTNRHI 274
Score = 114 (45.2 bits), Expect = 0.00052, P = 0.00052
Identities = 34/123 (27%), Positives = 53/123 (43%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHG----HGKVKDIELRGHADSVDQLC 73
GH + S+ + L S S D T R W I P H + D G ++ +
Sbjct: 233 GHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRAS 292
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDEL 132
W+P D IA SGD++V +WD ++GK + +N + + P+ I V D
Sbjct: 293 WNPA-GDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRN 351
Query: 133 TIL 135
+L
Sbjct: 352 LML 354
Score = 112 (44.5 bits), Expect = 0.00087, P = 0.00087
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 7 PFK--NLHSREYTGH----KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI 60
PF N H R Y G +K + +WN G K+A+GS D++ VW + GK+
Sbjct: 266 PFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWDFKT---GKIL-Y 321
Query: 61 ELRGHADSVDQLCWDPKHADLIATASGDKTVRL 93
+L GH +V+ + + P + +I +AS D+ + L
Sbjct: 322 KLPGHKGTVNDVRFTPNNEPIIVSASSDRNLML 354
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 167 (63.8 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 70/271 (25%), Positives = 116/271 (42%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V + +N G+ L S S D+T VW E G +VK L+GH V+ C+ +
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET-GE-RVK--RLKGHTSFVNS-CYPAR 162
Query: 78 HA-DLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILD 136
L+ T S D TV+LWD R Q + + + + +T+ I G D+++ + D
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 137 VRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSL 196
+R+ K Y + A ++TG L+ + G Y ++ + M V
Sbjct: 223 LRQ------NKLTYTMRGHADSVTG----LSLSSEGSYLLS-NAMDNTVRVWDVRPFAP- 270
Query: 197 WDISEMLCVRTFT----KLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC 252
+ CV+ F E + S+S G IA+ S D F+ + + R++ QIP
Sbjct: 271 ----KERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWHSLSVRSLGQIPR 326
Query: 253 -RAAMNSVEWNPKYNL-LAYAGDDKNKYQAD 281
R + P+ + + A DK Y +
Sbjct: 327 HRLSRQEDSVKPQEGIXILSASSDKRLYMGE 357
Score = 131 (51.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 37/149 (24%), Positives = 76/149 (51%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWD 75
+GH+ +V+ ++ G+ LAS D+ +W + +G + L+GH+ +V +L ++
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWSV----YGDCDNYATLKGHSGAVMELHYN 119
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPD-GTH-IAVGNRDDELT 133
++ +AS DKTV +WD+ +G+ ++ + +N Y G + G+ D +
Sbjct: 120 TD-GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 134 ILDVRKFKPIHRRKFGYEVNEIAWNMTGE 162
+ D+RK I + Y+V + +N T +
Sbjct: 179 LWDIRKKAAIQTFQNTYQVLAVTFNDTSD 207
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 137 (53.3 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 47/169 (27%), Positives = 77/169 (45%)
Query: 6 IPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH 65
IP K E+ H V SV ++ G LA+ S D++ +VW + + + L H
Sbjct: 46 IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM----YRQRFLYSLYRH 101
Query: 66 ADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIA 124
V + P LI + S DKT+++WD + +C S N + + P GT IA
Sbjct: 102 THWVRCAKFSPD-GRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIA 160
Query: 125 VGNRDDELTILDVRKFKPI-HRRKFGYEVNEIAWNMTGEMFFLTTGNAG 172
D + + DVR K + H + VN I+++ +G + +T + G
Sbjct: 161 SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGN-YLITASSDG 208
Score = 126 (49.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 40/150 (26%), Positives = 75/150 (50%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI-ELRGHADSVDQLCWDPK 77
H V ++ G + S S D+T ++W + V + + G A+ VD ++P
Sbjct: 101 HTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTTNKQCVNNFSDSVGFANFVD---FNPS 155
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTILD 136
IA+A D+TV++WD R K Q ++ +N I++ P G ++ + D L ILD
Sbjct: 156 -GTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 214
Query: 137 VRKFKPIHRRKFGYE--VNEIAWNMTGEMF 164
+ + + I+ + G+ V ++++ GE+F
Sbjct: 215 LLEGRLIYTLQ-GHTGPVFTVSFSKGGELF 243
Score = 118 (46.6 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 38/128 (29%), Positives = 56/128 (43%)
Query: 12 HSR--EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSV 69
H+R Y GHK V SV ++ G LAS S D+T R+W P GK E + H V
Sbjct: 8 HARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWI--PDKRGKFS--EFKAHTAPV 63
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT-YKPDGTHIAVGNR 128
+ + +ATAS DK++++W + + + PDG I +
Sbjct: 64 RSVDFSAD-GQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 122
Query: 129 DDELTILD 136
D + I D
Sbjct: 123 DKTIKIWD 130
Score = 95 (38.5 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 170 NAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIAS 229
+ G CI+ P G Y S+D + + D+ E + T PV T+SFS G+ AS
Sbjct: 186 SGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFAS 245
Query: 230 ASED 233
D
Sbjct: 246 GGAD 249
Score = 87 (35.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 24/100 (24%), Positives = 46/100 (46%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+ +P G A +D V +WD+ ++ + V ISF +G+Y+ +AS D
Sbjct: 150 VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGT 209
Query: 236 IDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGDD 274
+ I ++ GR ++ + + +V ++ L A G D
Sbjct: 210 LKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGAD 249
Score = 63 (27.2 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 159 MTGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLW--DISEMLCVRTFTK 210
+ G + + G+ G + ++ G FA G AD+ V LW + E+ C + TK
Sbjct: 216 LEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHC-KGLTK 269
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 40/102 (39%), Positives = 60/102 (58%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R +TGH+ V S++++ G LAS DQ ++W + G + ELRGH DS+ L
Sbjct: 462 RLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDL---ASGTLFK-ELRGHTDSITSLA 517
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINI 114
+ P + LIA+AS D +VR+WD RS C+ A+ SGE + +
Sbjct: 518 FSPD-SGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGV 558
Score = 142 (55.0 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 33/103 (32%), Positives = 52/103 (50%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
C+ P Y A GS D V LW + VR FT PV ++SFS G Y+ASA ED
Sbjct: 431 CVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQ 490
Query: 235 FIDISNVHTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKN 276
+ + ++ +G ++ ++ S+ ++P L+A A D +
Sbjct: 491 RLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNS 533
Score = 142 (55.0 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 38/124 (30%), Positives = 63/124 (50%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-RGHADSVDQLCW 74
Y GH V V + ASGS D+TAR+W + + + + GH VD + +
Sbjct: 380 YQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFD-----RTYPLRIYAGHLADVDCVKF 434
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDELT 133
P +++ +AT S DKTVRLW A+ G + G +++++ P+G ++A D L
Sbjct: 435 HP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLK 493
Query: 134 ILDV 137
+ D+
Sbjct: 494 LWDL 497
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 39/128 (30%), Positives = 62/128 (48%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R Y GH V V ++ LA+GS D+T R+W + ++ GH V L
Sbjct: 420 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRL----FTGHRGPVLSLS 475
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT---YKPDGTHIAVGNRDD 130
+ P + +A+A D+ ++LWD SG + EL G +IT + PD IA + D+
Sbjct: 476 FSP-NGKYLASAGEDQRLKLWDLASGTLFK--ELRGHTDSITSLAFSPDSGLIASASMDN 532
Query: 131 ELTILDVR 138
+ + D+R
Sbjct: 533 SVRVWDIR 540
Score = 71 (30.1 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 30/114 (26%), Positives = 49/114 (42%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-RGHADSVDQLCWDP 76
GH V+S + + L S S D + R W + G + L +GHA V + P
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-----GSFTNTVLYQGHAYPVWDVDISP 394
Query: 77 KHADLIATASGDKTVRLWDA-RSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
+ A+ S D+T RLW R+ A + + + P+ ++A G+ D
Sbjct: 395 -FSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTD 447
Score = 53 (23.7 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 157 WNM-TGEMFFLTTGNAGCYC-IAIDPMGRYFAVGSADSLVSLWDISEMLC 204
W++ +G +F G+ +A P A S D+ V +WDI C
Sbjct: 495 WDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCC 544
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 165 (63.1 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 40/102 (39%), Positives = 60/102 (58%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R +TGH+ V S+A++ G LAS DQ ++W + G + ELRGH D++ L
Sbjct: 480 RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDL---ASGTLYK-ELRGHTDNITSLT 535
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINI 114
+ P + LIA+AS D +VR+WD R+ CS A+ SGE + +
Sbjct: 536 FSPD-SSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGV 576
Score = 153 (58.9 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 37/126 (29%), Positives = 64/126 (50%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R Y GH V V ++ LA+GS D+T R+W + ++ GH V L
Sbjct: 438 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRL----FTGHRGPVLSLA 493
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDEL 132
+ P + +A+A D+ ++LWD SG ++ +NI ++T+ PD + IA + D+ +
Sbjct: 494 FSP-NGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSV 552
Query: 133 TILDVR 138
+ D+R
Sbjct: 553 RVWDIR 558
Score = 138 (53.6 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-RGHADSVDQLCW 74
Y GH V + + ASGS D+TAR+W + + + + GH VD + +
Sbjct: 398 YQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFD-----RTYPLRIYAGHLADVDCVKF 452
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDELT 133
P +++ +AT S DKTVRLW A+ G + G +++ + P+G ++A D L
Sbjct: 453 HP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLK 511
Query: 134 ILDV 137
+ D+
Sbjct: 512 LWDL 515
Score = 137 (53.3 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 32/103 (31%), Positives = 52/103 (50%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
C+ P Y A GS D V LW + VR FT PV +++FS G Y+ASA ED
Sbjct: 449 CVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ 508
Query: 235 FIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGDDKN 276
+ + ++ +G ++ + S+ ++P +L+A A D +
Sbjct: 509 RLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNS 551
Score = 77 (32.2 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 31/114 (27%), Positives = 50/114 (43%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-RGHADSVDQLCWDP 76
GH V+S + + L S S D + R W + G + L +GHA V L P
Sbjct: 358 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-----GSFTNTVLYQGHAYPVWDLDISP 412
Query: 77 KHADLIATASGDKTVRLWDA-RSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
++ A+ S D+T RLW R+ A + + + P+ ++A G+ D
Sbjct: 413 -YSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTD 465
Score = 47 (21.6 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 157 WNM-TGEMFFLTTGNA-GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC 204
W++ +G ++ G+ + P A S D+ V +WDI C
Sbjct: 513 WDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYC 562
>ASPGD|ASPL0000075365 [details] [associations]
symbol:sec13 species:162425 "Emericella nidulans"
[GO:0005643 "nuclear pore" evidence=IDA] [GO:0031081 "nuclear pore
distribution" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030127 "COPII vesicle coat" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005643
EMBL:BN001303 GO:GO:0051028 EMBL:AACD01000075 HOGENOM:HOG000216895
KO:K14004 OMA:IKLWKEE RefSeq:XP_661921.1 ProteinModelPortal:Q5B563
SMR:Q5B563 STRING:Q5B563 EnsemblFungi:CADANIAT00006147
GeneID:2872114 KEGG:ani:AN4317.2 OrthoDB:EOG4QNR53 Uniprot:Q5B563
Length = 309
Score = 164 (62.8 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 66/242 (27%), Positives = 110/242 (45%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW-D 75
+GH +H + G +LA+ S D+T +++ IE H V+ L+GH V + W
Sbjct: 10 SGHDDMIHDAGLDYYGRRLATCSSDKTIKIFEIEGDTHKLVET--LKGHEGPVWCVEWAH 67
Query: 76 PKHADLIATASGDKTVRLWDAR---------SGKCSQQAELS--GENIN-ITYKPD--GT 121
PK ++A++S D V +W + SG ++ + S ++N I++ P G
Sbjct: 68 PKFGTILASSSYDGKVLIWREQHQSSTAPIGSGAWTKVFDFSLHTASVNMISWAPHETGC 127
Query: 122 HIAVGNRDDELTILDVRKFKPIHR--RKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAID 179
+A + D +++L+ R H+ G VN I+W L + N G
Sbjct: 128 LLACASSDGHVSVLEFRDNSWTHQIFHAHGMGVNSISWAPAASPGSLVSSNPGI------ 181
Query: 180 PMGRYFAVGSADSLVSLWDIS-EMLCVRTFTKLE----WPVRTISFSHT---GDYIASAS 231
R F G +D+L+ +WD + E LE W VR +++S + YIASAS
Sbjct: 182 GQQRRFVTGGSDNLLKIWDYNPETKTYNATQTLEGHSDW-VRDVAWSPSILSKSYIASAS 240
Query: 232 ED 233
+D
Sbjct: 241 QD 242
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 32/108 (29%), Positives = 54/108 (50%)
Query: 34 KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK--HADLIATASGDKTV 91
+ +G D ++W P L GH+D V + W P IA+AS DKTV
Sbjct: 186 RFVTGGSDNLLKIWDYNPETKTYNATQTLEGHSDWVRDVAWSPSILSKSYIASASQDKTV 245
Query: 92 RLW--DARS-GKCSQQAELSGENI--NITYKPDGTHIAVGNRDDELTI 134
R+W DA + G+ + Q L +N+ +++ P G +AV D+++++
Sbjct: 246 RVWTADASNPGQWTSQV-LEFDNVLWRVSWSPSGNILAVSGGDNKVSL 292
Score = 122 (48.0 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 66/251 (26%), Positives = 101/251 (40%)
Query: 46 VWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQA 105
VW +E H K I D L W +H A +++D
Sbjct: 60 VWCVE-WAHPKFGTILASSSYDG-KVLIWREQHQSSTAPIGSGAWTKVFDF--------- 108
Query: 106 ELSGENIN-ITYKPD--GTHIAVGNRDDELTILDVRKFKPIHR--RKFGYEVNEIAWNMT 160
L ++N I++ P G +A + D +++L+ R H+ G VN I+W
Sbjct: 109 SLHTASVNMISWAPHETGCLLACASSDGHVSVLEFRDNSWTHQIFHAHGMGVNSISWAPA 168
Query: 161 GEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDIS-EMLCVRTFTKLE----WPV 215
L + N G R F G +D+L+ +WD + E LE W V
Sbjct: 169 ASPGSLVSSNPGI------GQQRRFVTGGSDNLLKIWDYNPETKTYNATQTLEGHSDW-V 221
Query: 216 RTISFSHT---GDYIASASEDLFI-----DISNVHTGRTVHQI-PCRAAMNSVEWNPKYN 266
R +++S + YIASAS+D + D SN G+ Q+ + V W+P N
Sbjct: 222 RDVAWSPSILSKSYIASASQDKTVRVWTADASN--PGQWTSQVLEFDNVLWRVSWSPSGN 279
Query: 267 LLAYAGDDKNK 277
+LA +G D NK
Sbjct: 280 ILAVSGGD-NK 289
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 154 (59.3 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 37/128 (28%), Positives = 64/128 (50%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH +V V W+ +G L + D + R+W +E + + + GH+ V L + P
Sbjct: 306 GHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEV----QEEILHQEGHSKGVHDLHFHPD 361
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTILD 136
L T D R+WD R+G+C E + I +I + P+G H+A G+ D+ + D
Sbjct: 362 -GSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWD 420
Query: 137 VRKFKPIH 144
+R+ + I+
Sbjct: 421 LRQRRCIY 428
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 36/137 (26%), Positives = 66/137 (48%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH K VH + ++ G+ +G +D ARVW + G+ + L GH + + + P
Sbjct: 348 GHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRT---GRCV-MFLEGHIKEIYSINFSPN 403
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENI--NITYKP-DGTHIAVGNRDDELTI 134
+AT SGD ++WD R +C + +N+ ++ ++P DG ++ G D+ I
Sbjct: 404 GFH-VATGSGDNACKVWDLRQRRCIYTIP-AHQNLVSSVKFQPNDGHYLLTGAYDNTAKI 461
Query: 135 LDVRKFKPIHRRKFGYE 151
+ P+ + G+E
Sbjct: 462 WTHPGWSPL-KTLAGHE 477
Score = 93 (37.8 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 29/115 (25%), Positives = 50/115 (43%)
Query: 172 GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASAS 231
G + + P G G DS +WD+ CV + +I+FS G ++A+ S
Sbjct: 352 GVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGS 411
Query: 232 EDLFIDISNVHTGRTVHQIPCRAAM-NSVEWNPK--YNLLAYAGDDKNKYQADEG 283
D + ++ R ++ IP + +SV++ P + LL A D+ K G
Sbjct: 412 GDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPG 466
Score = 64 (27.6 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 24/113 (21%), Positives = 53/113 (46%)
Query: 62 LRGHADSVDQLCWDPK------HADL-IATASGDKTVRLWDARSGKCSQQAELSGENINI 114
LRGH +V + + P+ +D+ +A+ + D +V+LW S + A++ G ++ +
Sbjct: 254 LRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDE--PIADIEGHSMRV 311
Query: 115 ---TYKPDGTHIAVGNRDDELTILDVRKFKPI-HRRKFGYEVNEIAWNMTGEM 163
T+ P G + D + D+ + I H+ V+++ ++ G +
Sbjct: 312 ARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSL 364
Score = 55 (24.4 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
G Y G+ D+ +W ++T E V + S G IA+ S D
Sbjct: 447 GHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYD 498
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 136 (52.9 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 36/103 (34%), Positives = 53/103 (51%)
Query: 3 ESSIPFKNLHSRE----YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK 58
+S+I N H+ + Y GH+ V SV + T + SGS D T RVWH++
Sbjct: 442 DSTIKVWNYHTGQCIATYRGHEDAVVSVDF--TNKSIVSGSADHTVRVWHVDSR-----T 494
Query: 59 DIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKC 101
LRGH D V+ + ++ I +AS D T+R+WD S +C
Sbjct: 495 CYTLRGHTDWVNHVKIHSA-SNTIFSASDDTTIRMWDMNSNEC 536
Score = 101 (40.6 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 29/85 (34%), Positives = 41/85 (48%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
TGH K V ++ ++ KL SG +D T +VW+ H RGH D+V + +
Sbjct: 420 TGHTKGVRALVFD--NQKLISGGLDSTIKVWNY----HTGQCIATYRGHEDAVVSVDFTN 473
Query: 77 KHADLIATASGDKTVRLWDARSGKC 101
K I + S D TVR+W S C
Sbjct: 474 KS---IVSGSADHTVRVWHVDSRTC 495
Score = 95 (38.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 9 KNLHS-REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHAD 67
K H+ + +TGH V + +N L +GS D T ++W I+ G VK L GH
Sbjct: 371 KGTHTIKTFTGHSDGVTCLQFN--RKYLMTGSYDTTIKIWKIDS-GEC-VKT--LTGHTK 424
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKC 101
V L +D + LI+ D T+++W+ +G+C
Sbjct: 425 GVRALVFD--NQKLISGGL-DSTIKVWNYHTGQC 455
Score = 80 (33.2 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 19/79 (24%), Positives = 39/79 (49%)
Query: 184 YFAVGSADSLVSLWDISEMLCVRT-FTKLE--WPVRTISFSHTGDYIASASEDLFIDISN 240
+F + D+ + LWD++ C+RT F +E W + +F I S + D I + +
Sbjct: 640 HFLTSALDNTIKLWDVATGKCIRTQFGHIEGVWSIAADTFR-----IISGAHDRLIKVWD 694
Query: 241 VHTGRTVHQIPCRAAMNSV 259
+ G+ +H ++++ V
Sbjct: 695 LQNGKCLHTFSNNSSVSCV 713
Score = 77 (32.2 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 21/92 (22%), Positives = 39/92 (42%)
Query: 157 WNM-TGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPV 215
WN TG+ G+ +++D + GSAD V +W + C +W V
Sbjct: 448 WNYHTGQCIATYRGHEDAV-VSVDFTNKSIVSGSADHTVRVWHVDSRTCYTLRGHTDW-V 505
Query: 216 RTISFSHTGDYIASASEDLFIDISNVHTGRTV 247
+ + I SAS+D I + ++++ +
Sbjct: 506 NHVKIHSASNTIFSASDDTTIRMWDMNSNECI 537
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 159 (61.0 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 38/99 (38%), Positives = 57/99 (57%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R +TGH+ V S+A++ G LAS DQ ++W + G + ELRGH D++ L
Sbjct: 462 RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDL---ASGTLYK-ELRGHTDNITSLT 517
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI 112
+ P + LIA+AS D +VR+WD R+ CS A+ S +
Sbjct: 518 FSPD-SGLIASASMDNSVRVWDIRNTYCSAPADGSSSEL 555
Score = 150 (57.9 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 37/126 (29%), Positives = 63/126 (50%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R Y GH V V ++ LA+GS D+T R+W + ++ GH V L
Sbjct: 420 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRL----FTGHRGPVLSLA 475
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDEL 132
+ P + +A+A D+ ++LWD SG ++ +NI ++T+ PD IA + D+ +
Sbjct: 476 FSP-NGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSV 534
Query: 133 TILDVR 138
+ D+R
Sbjct: 535 RVWDIR 540
Score = 138 (53.6 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-RGHADSVDQLCW 74
Y GH V + + ASGS D+TAR+W + + + + GH VD + +
Sbjct: 380 YQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFD-----RTYPLRIYAGHLADVDCVKF 434
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDELT 133
P +++ +AT S DKTVRLW A+ G + G +++ + P+G ++A D L
Sbjct: 435 HP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLK 493
Query: 134 ILDV 137
+ D+
Sbjct: 494 LWDL 497
Score = 136 (52.9 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 32/103 (31%), Positives = 51/103 (49%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
C+ P Y A GS D V LW + VR FT PV +++FS G Y+ASA ED
Sbjct: 431 CVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ 490
Query: 235 FIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGDDKN 276
+ + ++ +G ++ + S+ ++P L+A A D +
Sbjct: 491 RLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNS 533
Score = 77 (32.2 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 31/114 (27%), Positives = 50/114 (43%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-RGHADSVDQLCWDP 76
GH V+S + + L S S D + R W + G + L +GHA V L P
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-----GSFTNTVLYQGHAYPVWDLDISP 394
Query: 77 KHADLIATASGDKTVRLWDA-RSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
++ A+ S D+T RLW R+ A + + + P+ ++A G+ D
Sbjct: 395 -YSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTD 447
Score = 46 (21.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 157 WNM-TGEMFFLTTGNA-GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC 204
W++ +G ++ G+ + P A S D+ V +WDI C
Sbjct: 495 WDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYC 544
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 164 (62.8 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 58/259 (22%), Positives = 115/259 (44%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GHK + V +N + L S D+T RVW +E G +++ + H D V+ + + +
Sbjct: 77 GHKGAIMEVKFNADSSHLVSAGTDKTVRVWDMET-G-SCIRNF--KSHTDIVNSVDVNRR 132
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDV 137
+I +AS D TV + D RS + +++ + +T+ ++ G D+++ + D+
Sbjct: 133 GPQMICSASDDGTVMVHDMRSKEAAKKFICKYQQTAVTFNDAADNVICGGIDNQIKVWDM 192
Query: 138 RKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLW 197
+ + G+ + +++ FL + + C ++ D R F A LV+ +
Sbjct: 193 LR-NDVRYVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDI--RPFV--PAQRLVARY 247
Query: 198 DISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCR-AAM 256
+ + K W R +YI + S D F+ + N + V+++P ++
Sbjct: 248 QGASHNFEKNLLKCGWSPRD-------NYITAGSADRFVYVWNAKSRACVYKLPGHLGSV 300
Query: 257 NSVEWNPKYNLLAYAGDDK 275
N +P +L AG DK
Sbjct: 301 NCTALHPTQQILLSAGSDK 319
Score = 117 (46.2 bits), Expect = 0.00020, P = 0.00020
Identities = 32/144 (22%), Positives = 71/144 (49%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWDP 76
GH ++++ ++ G+ LAS DQ +W++ G+ ++ L+GH ++ ++ ++
Sbjct: 34 GHGGEIYTSQFSSDGSFLASAGYDQQIFLWNV----FGECENFAVLKGHKGAIMEVKFNA 89
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
+ L++ A DKTVR+WD +G C + + + +N + G + DD ++
Sbjct: 90 DSSHLVS-AGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMV 148
Query: 136 -DVRKFKPIHRRKFGYEVNEIAWN 158
D+R + + Y+ + +N
Sbjct: 149 HDMRSKEAAKKFICKYQQTAVTFN 172
>MGI|MGI:1341200 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog
(yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1341200 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 CTD:5822 HOVERGEN:HBG030681
OrthoDB:EOG4R7V93 EMBL:AK088254 EMBL:AK088983 IPI:IPI00469755
RefSeq:NP_083822.1 RefSeq:XP_003946476.1 UniGene:Mm.103522
ProteinModelPortal:Q8BU03 SMR:Q8BU03 STRING:Q8BU03
PhosphoSite:Q8BU03 PRIDE:Q8BU03 Ensembl:ENSMUST00000042556
GeneID:110816 KEGG:mmu:110816 InParanoid:Q8BU03 ChiTaRS:PWP2
NextBio:364713 Bgee:Q8BU03 CleanEx:MM_PWP2 Genevestigator:Q8BU03
GermOnline:ENSMUSG00000032834 Uniprot:Q8BU03
Length = 919
Score = 171 (65.3 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 57/205 (27%), Positives = 100/205 (48%)
Query: 14 REYTGHKKKVHS-VAWNCTGTKLASGSVDQ-TARVWHIEPHGHGKVKDIELRGHADSVDQ 71
R +T + S VA + +G +++G+ D VW ++ G++ D+ L GH V
Sbjct: 451 RTFTSPRPTQFSCVAVDSSGEIVSAGAQDSFEIFVWSMQT---GRLLDV-LSGHEGPVSG 506
Query: 72 LCWDPKHADLIATASGDKTVRLWDA-RSGKCSQQAELSGENINITYKPDGTHIAVGNRDD 130
LC++P + ++A+AS DKTVRLWD S + + L+ + + +T++PDG +AV +
Sbjct: 507 LCFNPMKS-ILASASWDKTVRLWDMFDSWRTKETLTLTSDALAVTFRPDGAELAVATLNS 565
Query: 131 ELTILD------VRKFKPIHRRKFGY-EVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGR 183
++T D V + H K G E+++I + + TT C + D G+
Sbjct: 566 QITFWDPENAVQVGSIEGRHDLKTGRKELDKITAKHSAKGKAFTT-----LCYSAD--GQ 618
Query: 184 YFAVGSADSLVSLWDISEMLCVRTF 208
G V L+ + E + V+ F
Sbjct: 619 SILAGGMSKFVCLYHVREQILVKRF 643
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 126 (49.4 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 35/125 (28%), Positives = 56/125 (44%)
Query: 160 TGEMFF-LTTGNAGCY--CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVR 216
TG + +T AGC C P G F G+ DS + +WD+ E V F PV
Sbjct: 338 TGRVLTKVTDETAGCALTCAQFHPDGLIFGTGTGDSQIKIWDLKERTNVANFPGHSGPVT 397
Query: 217 TISFSHTGDYIASASEDLFI---DISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGD 273
I+FS G Y+A+ ++D + D+ + +T+ + + S+ ++ LA G
Sbjct: 398 AIAFSENGYYLATGAQDSSLKLWDLRKLKNFKTI-TLDNNYEVKSLVFDQSGTYLAVGGS 456
Query: 274 DKNKY 278
D Y
Sbjct: 457 DIRVY 461
Score = 95 (38.5 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 169 GNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRTISFSHTGDY 226
G++G IA G Y A G+ DS + LWD+ ++ +T T + V+++ F +G Y
Sbjct: 391 GHSGPVTAIAFSENGYYLATGAQDSSLKLWDLRKLKNFKTITLDNNYEVKSLVFDQSGTY 450
Query: 227 IASASEDLFIDI 238
+A D+ + I
Sbjct: 451 LAVGGSDIRVYI 462
Score = 86 (35.3 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDG 120
L+GH V + + P A ++ +AS D T+R+W G C Q + ++ G
Sbjct: 261 LKGHTKKVSSVIYHPAQA-VVFSASSDSTIRVWSVTGGNCVQVVRAHESAVTGLSLHATG 319
Query: 121 THIAVGNRDDELTILDVR 138
++ + D D++
Sbjct: 320 DYLLSSSEDQYWAFSDIQ 337
Score = 41 (19.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 18/73 (24%), Positives = 30/73 (41%)
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT---YKPDGTHIA 124
S+D LC P + + T DK V ++D R + A L G ++ Y P +
Sbjct: 227 SLD-LC--PTDTNKVLTGGADKNVVVFDRREEQIV--ATLKGHTKKVSSVIYHPAQAVVF 281
Query: 125 VGNRDDELTILDV 137
+ D + + V
Sbjct: 282 SASSDSTIRVWSV 294
>TAIR|locus:2123752 [details] [associations]
symbol:AT4G32990 "AT4G32990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 IPI:IPI00532927 RefSeq:NP_195025.5 UniGene:At.54584
ProteinModelPortal:F4JVW1 SMR:F4JVW1 EnsemblPlants:AT4G32990.1
GeneID:829436 KEGG:ath:AT4G32990 OMA:WKLASEP Uniprot:F4JVW1
Length = 328
Score = 141 (54.7 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWDP 76
GH+ +V SV+WN +G+ LA+ D++ +W I+P + I L GH++ V + W P
Sbjct: 90 GHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHP 149
Query: 77 KHADLIATASGDKTVRLW 94
D++ + S D T+++W
Sbjct: 150 T-MDVLFSCSYDNTIKIW 166
Score = 95 (38.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 30/103 (29%), Positives = 48/103 (46%)
Query: 61 ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDG 120
+L GH D V + W+P +IA+ S DKTVR+W+ S S +L G + ++ DG
Sbjct: 15 KLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKL-GHRLG-SF--DG 70
Query: 121 THIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEM 163
N + + V + H EV ++WN +G +
Sbjct: 71 NTCVWENFATDSESVSVLRG---HES----EVKSVSWNASGSL 106
Score = 62 (26.9 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 29/109 (26%), Positives = 51/109 (46%)
Query: 189 SADSLVSLW----DISEMLCVRTFTKLE----WPVRTISFSHTGDYIASASEDLFI---- 236
S D+ + +W + + CV+T ++L V +ISF+ GD + + S+DL +
Sbjct: 158 SYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTCSDDLAVKIWK 217
Query: 237 -DISNVHTGRTVHQIP----CRAA------MNSVEWNPKYNLLAYAGDD 274
DIS + +G +P C + + SV W+ + + AGDD
Sbjct: 218 TDISRMQSGEGY--VPWTHVCTLSGFHDRTIYSVHWSRDGVIASGAGDD 264
Score = 39 (18.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 177 AIDPMGRYFAVGSADSLVSLWDIS 200
A D R A S D +V +W ++
Sbjct: 302 APDKESRLLASASDDKMVKIWKLA 325
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 124 (48.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 36/127 (28%), Positives = 62/127 (48%)
Query: 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHAD 80
K + S+A++ G LASG++D ++ I GK+ L GHA + L + P +
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIFDIAT---GKLLHT-LEGHAMPIRSLTFSPD-SQ 203
Query: 81 LIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDV 137
L+ TAS D ++++D + + LSG +N+ + PD TH + D + + DV
Sbjct: 204 LLVTASDDGYIKIYDVQHANLA--GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDV 261
Query: 138 RKFKPIH 144
+H
Sbjct: 262 GTRTCVH 268
Score = 121 (47.7 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 41/129 (31%), Positives = 64/129 (49%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-VKDIELRGHADSVDQLCWDP 76
GH+ V SV + T AS S+D R+W +E +GK +K I+ G D+ L + P
Sbjct: 62 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE---NGKQIKSIDA-GPVDAWT-LAFSP 116
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTIL 135
+ +AT + V ++ SGK + G+ I +I Y PDG ++A G D + I
Sbjct: 117 D-SQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 136 DVRKFKPIH 144
D+ K +H
Sbjct: 176 DIATGKLLH 184
Score = 104 (41.7 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
IA P G+Y A G+ D +++++DI+ + T P+R+++FS + +AS+D +
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 236 IDISNV 241
I I +V
Sbjct: 214 IKIYDV 219
Score = 103 (41.3 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 41/165 (24%), Positives = 72/165 (43%)
Query: 14 REYTGHKKKVHSVAWNCTGTK----LASGSVDQTARVWHIEPHGHGKVKDIE--LRGHAD 67
++ H + SVAW + + +GS+D +VW K+ D++ L GH
Sbjct: 10 KQEQAHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDE---KL-DLQWSLEGHQL 65
Query: 68 SVDQLCWDPKHADLIATASG-DKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAV 125
V + D H IA +S D +RLWD +GK + + + + + PD ++A
Sbjct: 66 GVVSV--DISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLAT 123
Query: 126 GNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTG 169
G ++ I V K + G + IA++ G+ +L +G
Sbjct: 124 GTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK--YLASG 166
Score = 84 (34.6 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+A P +F S+D V +WD+ CV TF + V + ++ G I S +D
Sbjct: 238 VAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQE 297
Query: 236 IDI 238
I I
Sbjct: 298 IHI 300
Score = 69 (29.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 24/119 (20%), Positives = 48/119 (40%)
Query: 160 TGEMFFLTTGNA-GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRT 217
TG++ G+A + P + S D + ++D+ T + W V
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASW-VLN 237
Query: 218 ISFSHTGDYIASASEDLFIDISNVHTGRTVHQI-PCRAAMNSVEWNPKYNLLAYAGDDK 275
++F + S+S D + + +V T VH + + V++N + + GDD+
Sbjct: 238 VAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 296
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 124 (48.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 36/127 (28%), Positives = 62/127 (48%)
Query: 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHAD 80
K + S+A++ G LASG++D ++ I GK+ L GHA + L + P +
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIFDIAT---GKLLHT-LEGHAMPIRSLTFSPD-SQ 203
Query: 81 LIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDV 137
L+ TAS D ++++D + + LSG +N+ + PD TH + D + + DV
Sbjct: 204 LLVTASDDGYIKIYDVQHANLA--GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDV 261
Query: 138 RKFKPIH 144
+H
Sbjct: 262 GTRTCVH 268
Score = 121 (47.7 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 41/129 (31%), Positives = 64/129 (49%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-VKDIELRGHADSVDQLCWDP 76
GH+ V SV + T AS S+D R+W +E +GK +K I+ G D+ L + P
Sbjct: 62 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE---NGKQIKSIDA-GPVDAWT-LAFSP 116
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTIL 135
+ +AT + V ++ SGK + G+ I +I Y PDG ++A G D + I
Sbjct: 117 D-SQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 136 DVRKFKPIH 144
D+ K +H
Sbjct: 176 DIATGKLLH 184
Score = 104 (41.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
IA P G+Y A G+ D +++++DI+ + T P+R+++FS + +AS+D +
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 236 IDISNV 241
I I +V
Sbjct: 214 IKIYDV 219
Score = 102 (41.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 42/166 (25%), Positives = 72/166 (43%)
Query: 14 REYTGHKKKVHSVAWNCTGTK-----LASGSVDQTARVWHIEPHGHGKVKDIE--LRGHA 66
++ H + SVAW T K + +GS+D +VW + D++ L GH
Sbjct: 10 KQEQAHDDAIWSVAWG-TNKKENSETVVTGSLDDLVKVWK----WRDERLDLQWSLEGHQ 64
Query: 67 DSVDQLCWDPKHADLIATASG-DKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIA 124
V + D H IA +S D +RLWD +GK + + + + + PD ++A
Sbjct: 65 LGVVSV--DISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLA 122
Query: 125 VGNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTG 169
G ++ I V K + G + IA++ G+ +L +G
Sbjct: 123 TGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK--YLASG 166
Score = 84 (34.6 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+A P +F S+D V +WD+ CV TF + V + ++ G I S +D
Sbjct: 238 VAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQE 297
Query: 236 IDI 238
I I
Sbjct: 298 IHI 300
Score = 69 (29.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 24/119 (20%), Positives = 48/119 (40%)
Query: 160 TGEMFFLTTGNA-GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRT 217
TG++ G+A + P + S D + ++D+ T + W V
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASW-VLN 237
Query: 218 ISFSHTGDYIASASEDLFIDISNVHTGRTVHQI-PCRAAMNSVEWNPKYNLLAYAGDDK 275
++F + S+S D + + +V T VH + + V++N + + GDD+
Sbjct: 238 VAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 296
>ASPGD|ASPL0000054401 [details] [associations]
symbol:AN0305 species:162425 "Emericella nidulans"
[GO:0034388 "Pwp2p-containing subcomplex of 90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676
GO:GO:0030529 EMBL:AACD01000006 InterPro:IPR007148 Pfam:PF04003
HOGENOM:HOG000212524 KO:K14556 OMA:SIFAHDD OrthoDB:EOG4N07P3
RefSeq:XP_657909.1 ProteinModelPortal:Q5BGM5 STRING:Q5BGM5
EnsemblFungi:CADANIAT00002409 GeneID:2876084 KEGG:ani:AN0305.2
Uniprot:Q5BGM5
Length = 963
Score = 147 (56.8 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 52/200 (26%), Positives = 82/200 (41%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW- 74
+ GHK + +A++ G +LASGS D +W + +V +LRGH D + L +
Sbjct: 111 FNGHKSAITQLAFDNAGVRLASGSRDTNIILWDLI----SEVGLFKLRGHTDQITSLHFL 166
Query: 75 DP-----------KHADLIATASGDKTVRLWDARSGKCSQQ--AELSGENINITYKPDGT 121
P +HA + T D +++WD S C + A+ +GE ++ PD +
Sbjct: 167 VPTLELLNEAGLSEHAGFLITTGKDALIKVWDLASQHCIETHIAQSNGECWSLGLAPDQS 226
Query: 122 HIAVGNRDDELTI--LDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAID 179
G D EL +D I + K G E I + F G I+
Sbjct: 227 GCITGGNDGELKAWSIDEGAMIEISKEKTGSENRRI---LADRGSFYRNGKDRTTGISFH 283
Query: 180 PMGRYFAVGSADSLVSLWDI 199
P Y A ++ V +W I
Sbjct: 284 PRADYVAFHGSEKAVEIWRI 303
Score = 69 (29.3 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 184 YFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
+F+V S D ++ WD + ++ + + ++ SHTG++I +AS D
Sbjct: 667 FFSV-SKDRVIKYWDGDKFEHIQKLSGHHGEIWAMAISHTGEFIVTASHD 715
Score = 44 (20.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 189 SADSLVSLWDISEMLCVRTFTKLEWPVRTISF 220
SAD V LW + C ++F E + ++F
Sbjct: 624 SADKTVRLWGLDFGDCHKSFLAHEDSIMAVAF 655
>UNIPROTKB|E1BVC4 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AADN02014522 EMBL:AADN02014521 IPI:IPI00586706
RefSeq:XP_414450.3 UniGene:Gga.12581 ProteinModelPortal:E1BVC4
Ensembl:ENSGALT00000013715 GeneID:416119 KEGG:gga:416119
Uniprot:E1BVC4
Length = 320
Score = 163 (62.4 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 75/292 (25%), Positives = 136/292 (46%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW-D 75
T H+ +H + GT+LA+ S D++ +++ + +G G++ +LRGH V Q+ W
Sbjct: 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVR-NG-GQILIADLRGHEGPVWQVAWAH 67
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN--IN-ITYKPD--GTHIAVGNRDD 130
P + +++A+ S D+ V +W +G + E +G + +N + + P G +A G+ D
Sbjct: 68 PMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSDG 127
Query: 131 ELTIL--------DVRKFKPIHRRKFGYEVNEIAWN---MTGEMFFLTTGNAGCYCIAID 179
+++L +V+K H G N ++W + G + +G Y
Sbjct: 128 AISLLSYTGDGQWEVKKISNAHT--IG--CNAVSWAPAVVPGSLIEQPSGQKPNYI---- 179
Query: 180 PMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE----WPVRTISFSHT-G---DYIASAS 231
+ FA G D+LV +W + + KLE W VR ++++ + G IAS S
Sbjct: 180 ---KRFASGGCDNLVKIWKEEDGQW-KEEQKLEAHSDW-VRDVAWAPSIGLPTSTIASCS 234
Query: 232 ED--LFIDISNVHTGRTVHQIPCRAAMNSVEWNPKY----NLLAYAGDDKNK 277
+D +FI + +G + N V W+ + N+LA +G D NK
Sbjct: 235 QDGRVFIWTCDDASGSSWSP-KLLHKFNDVVWHVSWSITANILAVSGGD-NK 284
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 124 (48.7 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 36/127 (28%), Positives = 62/127 (48%)
Query: 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHAD 80
K + S+A++ G LASG++D ++ I GK+ L GHA + L + P +
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIFDIAT---GKLLHT-LEGHAMPIRSLTFSPD-SQ 203
Query: 81 LIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDV 137
L+ TAS D ++++D + + LSG +N+ + PD TH + D + + DV
Sbjct: 204 LLVTASDDGYIKIYDVQHANLA--GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDV 261
Query: 138 RKFKPIH 144
+H
Sbjct: 262 GTRTCVH 268
Score = 121 (47.7 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 41/129 (31%), Positives = 64/129 (49%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-VKDIELRGHADSVDQLCWDP 76
GH+ V SV + T AS S+D R+W +E +GK +K I+ G D+ L + P
Sbjct: 62 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE---NGKQIKSIDA-GPVDAWT-LAFSP 116
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTIL 135
+ +AT + V ++ SGK + G+ I +I Y PDG ++A G D + I
Sbjct: 117 D-SQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 136 DVRKFKPIH 144
D+ K +H
Sbjct: 176 DIATGKLLH 184
Score = 104 (41.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
IA P G+Y A G+ D +++++DI+ + T P+R+++FS + +AS+D +
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 236 IDISNV 241
I I +V
Sbjct: 214 IKIYDV 219
Score = 102 (41.0 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 42/166 (25%), Positives = 72/166 (43%)
Query: 14 REYTGHKKKVHSVAWNCTGTK-----LASGSVDQTARVWHIEPHGHGKVKDIE--LRGHA 66
++ H + SVAW T K + +GS+D +VW + D++ L GH
Sbjct: 10 KQEQAHDDAIWSVAWG-TNKKENSETVVTGSLDDLVKVWK----WRDERLDLQWSLEGHQ 64
Query: 67 DSVDQLCWDPKHADLIATASG-DKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIA 124
V + D H IA +S D +RLWD +GK + + + + + PD ++A
Sbjct: 65 LGVVSV--DISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLA 122
Query: 125 VGNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTG 169
G ++ I V K + G + IA++ G+ +L +G
Sbjct: 123 TGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK--YLASG 166
Score = 76 (31.8 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASE 232
+A P +F S+D V +WD+ CV TF + V + ++ G I S +
Sbjct: 238 VAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGD 294
Score = 66 (28.3 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 24/109 (22%), Positives = 42/109 (38%)
Query: 160 TGEMFFLTTGNA-GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRT 217
TG++ G+A + P + S D + ++D+ T + W V
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASW-VLN 237
Query: 218 ISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYN 266
++F + S+S D + + +V T VH + V W KYN
Sbjct: 238 VAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDH--QDQV-WGVKYN 283
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 156 (60.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 37/99 (37%), Positives = 56/99 (56%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R +TGH+ V S+A++ G LAS DQ ++W + G + ELRGH D++ L
Sbjct: 462 RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDL---ASGTLFK-ELRGHTDNITSLT 517
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI 112
+ P + LIA+AS D +VR+WD R+ CS + S +
Sbjct: 518 FSPD-SSLIASASMDNSVRVWDIRNTHCSAPTDGSSSEL 555
Score = 153 (58.9 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 37/126 (29%), Positives = 64/126 (50%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R Y GH V V ++ LA+GS D+T R+W + ++ GH V L
Sbjct: 420 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRL----FTGHRGPVLSLA 475
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDEL 132
+ P + +A+A D+ ++LWD SG ++ +NI ++T+ PD + IA + D+ +
Sbjct: 476 FSP-NGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSV 534
Query: 133 TILDVR 138
+ D+R
Sbjct: 535 RVWDIR 540
Score = 141 (54.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 38/124 (30%), Positives = 62/124 (50%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-RGHADSVDQLCW 74
Y GH V V + ASGS D+TAR+W + + + + GH VD + +
Sbjct: 380 YQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFD-----RTYPLRIYAGHLADVDCVKF 434
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDELT 133
P +++ +AT S DKTVRLW A+ G + G +++ + P+G ++A D L
Sbjct: 435 HP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLK 493
Query: 134 ILDV 137
+ D+
Sbjct: 494 LWDL 497
Score = 137 (53.3 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 32/103 (31%), Positives = 52/103 (50%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
C+ P Y A GS D V LW + VR FT PV +++FS G Y+ASA ED
Sbjct: 431 CVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ 490
Query: 235 FIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGDDKN 276
+ + ++ +G ++ + S+ ++P +L+A A D +
Sbjct: 491 RLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNS 533
Score = 74 (31.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 30/114 (26%), Positives = 50/114 (43%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-RGHADSVDQLCWDP 76
GH V+S + + L S S D + R W + G + L +GHA V + P
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-----GSFTNTVLYQGHAYPVWDVDISP 394
Query: 77 KHADLIATASGDKTVRLWDA-RSGKCSQQAELSGENINITYKPDGTHIAVGNRD 129
++ A+ S D+T RLW R+ A + + + P+ ++A G+ D
Sbjct: 395 -YSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTD 447
Score = 48 (22.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 157 WNM-TGEMFFLTTGNA-GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC 204
W++ +G +F G+ + P A S D+ V +WDI C
Sbjct: 495 WDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTHC 544
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 165 (63.1 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 50/181 (27%), Positives = 85/181 (46%)
Query: 2 GESSIPFKNLHSREYT--GHKKKVHSVAWNCTGT-KLASGSVDQTARVWHIEPHGHGKVK 58
GES + + +T G K+ + +AW+ T LA+G + + +W ++ G V
Sbjct: 208 GESKTEVQKIDRPLFTNNGSGKEGYGLAWSSLKTGDLATGDIIKKIYLWQMKEGGQWAVG 267
Query: 59 DIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK-----CS-QQAELSGENI 112
L GH SV+ L W P L+A+ S D +++LWD RS C+ Q+A S N+
Sbjct: 268 ANPLTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNV 327
Query: 113 NITYKPDGTHIAVGNRDDELTILDVR--KF-KPIHRRKF-GYEVNEIAWNMTGEMFFLTT 168
I++ I G D EL I ++ +F +P+ K+ + + W+ F+ +
Sbjct: 328 -ISWNRHENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMAS 386
Query: 169 G 169
G
Sbjct: 387 G 387
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 156 (60.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 39/150 (26%), Positives = 77/150 (51%)
Query: 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
+R + GH K V SVA++ ++ SGS D+T ++W+ +++ GH D V +
Sbjct: 99 TRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQE---DGHTDWVSCV 155
Query: 73 CWDPKHADLIATASG-DKTVRLWDARSGKCSQQAELSGEN--IN-ITYKPDGTHIAVGNR 128
+ P H++ I + G D+TV++W+ + C + G N +N +T PDG+ G +
Sbjct: 156 RFSPNHSNPIIVSCGWDRTVKVWNLAN--CKLKNNHHGHNGYLNTVTVSPDGSLCTSGGK 213
Query: 129 DDELTILDVRKFKPIHRRKFGYEVNEIAWN 158
D + + D+ K ++ + +N + ++
Sbjct: 214 DSKALLWDLNDGKNLYTLEHNDIINALCFS 243
Score = 41 (19.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 7/28 (25%), Positives = 14/28 (50%)
Query: 173 CYCIAIDPMGRYFAVGSADSLVSLWDIS 200
C +A G+ G +D+ + +W +S
Sbjct: 287 CLSLAWSTDGQTLFAGYSDNTIRVWQVS 314
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 157 (60.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 66/242 (27%), Positives = 104/242 (42%)
Query: 15 EYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
E+T GHK ++ VAW+ G AS D+ R+W + + K I GH ++ ++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWS-TKTILSDGHKRTIREI 65
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG-ENI--NITYKPDGTHIAVGNRD 129
W P +A+AS D T +W SG+ A L G EN ++++ G +A +RD
Sbjct: 66 RWSPC-GQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
Query: 130 DELTILDVR---KFK-PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYF 185
+ I +V +F+ +V + W+ T ++ L + + Y D + F
Sbjct: 125 KSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDI--LASAS---Y----DNTIKMF 175
Query: 186 AVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNV-HTG 244
A D+ WD C T T V I F G+ + S S+D I I H G
Sbjct: 176 AEEPIDND---WD-----CTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPG 227
Query: 245 RT 246
T
Sbjct: 228 NT 229
Score = 41 (19.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 256 MNSVEWNP 263
+NSV+WNP
Sbjct: 306 VNSVQWNP 313
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 157 (60.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 66/242 (27%), Positives = 104/242 (42%)
Query: 15 EYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
E+T GHK ++ VAW+ G AS D+ R+W + + K I GH ++ ++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWS-TKTILSDGHKRTIREI 65
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG-ENI--NITYKPDGTHIAVGNRD 129
W P +A+AS D T +W SG+ A L G EN ++++ G +A +RD
Sbjct: 66 RWSPC-GQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
Query: 130 DELTILDVR---KFK-PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYF 185
+ I +V +F+ +V + W+ T ++ L + + Y D + F
Sbjct: 125 KSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDV--LASAS---Y----DNTIKMF 175
Query: 186 AVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNV-HTG 244
A D+ WD C T T V I F G+ + S S+D I I H G
Sbjct: 176 AEEPIDND---WD-----CTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWKAYHPG 227
Query: 245 RT 246
T
Sbjct: 228 NT 229
Score = 41 (19.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 256 MNSVEWNP 263
+NSV+WNP
Sbjct: 306 VNSVQWNP 313
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 154 (59.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 36/99 (36%), Positives = 57/99 (57%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R +TGH+ V ++A++ G LAS DQ ++W + G + ELRGH D++ L
Sbjct: 462 RLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDL---ASGTLYK-ELRGHTDNITSLT 517
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI 112
+ P + LIA+AS D +VR+WD R+ C+ A+ S +
Sbjct: 518 FSPD-SSLIASASMDNSVRVWDIRNTYCNAPADGSSSEL 555
Score = 151 (58.2 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 37/126 (29%), Positives = 64/126 (50%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R Y GH V V ++ LA+GS D+T R+W + ++ GH V L
Sbjct: 420 RIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRL----FTGHRGPVLALA 475
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDEL 132
+ P + +A+A D+ ++LWD SG ++ +NI ++T+ PD + IA + D+ +
Sbjct: 476 FSP-NGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSV 534
Query: 133 TILDVR 138
+ D+R
Sbjct: 535 RVWDIR 540
Score = 136 (52.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 32/103 (31%), Positives = 51/103 (49%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
C+ P Y A GS D V LW + VR FT PV ++FS G Y+ASA ED
Sbjct: 431 CVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQ 490
Query: 235 FIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGDDKN 276
+ + ++ +G ++ + S+ ++P +L+A A D +
Sbjct: 491 RLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNS 533
Score = 124 (48.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-RGHADSVDQLCW 74
Y GH V + + AS S D+TAR+W + + + + GH VD + +
Sbjct: 380 YQGHAYPVWDLDISPCSLYFASASHDRTARLWSFD-----RTYPLRIYAGHLLDVDCVKF 434
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDELT 133
P +++ +AT S DKTVRLW + G + G + + + P+G ++A D L
Sbjct: 435 HP-NSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLK 493
Query: 134 ILDV 137
+ D+
Sbjct: 494 LWDL 497
Score = 73 (30.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 29/115 (25%), Positives = 48/115 (41%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V+S + + L S S D + R W + + +GHA V L P
Sbjct: 340 GHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSF----TNTVLYQGHAYPVWDLDISPC 395
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT---YKPDGTHIAVGNRD 129
A+AS D+T RLW + +G +++ + P+ ++A G+ D
Sbjct: 396 SL-YFASASHDRTARLWSF--DRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTD 447
Score = 50 (22.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS 98
LRGH V + + L++ S D ++R WD RS
Sbjct: 338 LRGHCGPVYSTRFLSDSSGLLS-CSEDMSIRYWDLRS 373
Score = 47 (21.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 157 WNM-TGEMFFLTTGNA-GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC 204
W++ +G ++ G+ + P A S D+ V +WDI C
Sbjct: 495 WDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYC 544
Score = 44 (20.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAEL 107
++ L+A + V+LW RS K + L
Sbjct: 279 NSKLLAAGFDNSCVKLWSLRSKKLKSEPHL 308
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 127 (49.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 42/149 (28%), Positives = 71/149 (47%)
Query: 1 MGESSIPFKNLHSREYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK 58
MG+ +I +EY+ K + S+A++ G LASG++D ++ I GK+
Sbjct: 127 MGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT---GKLL 183
Query: 59 DIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---INIT 115
L GHA + L + P + L+ TAS D ++++D + + LSG +N+
Sbjct: 184 HT-LEGHAMPIRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLA--GTLSGHASWVLNVA 239
Query: 116 YKPDGTHIAVGNRDDELTILDVRKFKPIH 144
+ PD TH + D + + DV IH
Sbjct: 240 FCPDDTHFVSSSSDKSVKVWDVGTRTCIH 268
Score = 119 (46.9 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 41/129 (31%), Positives = 64/129 (49%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-VKDIELRGHADSVDQLCWDP 76
GH+ V SV + T AS S+D R+W +E +GK +K I+ G D+ L + P
Sbjct: 62 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE---NGKQMKSIDA-GPVDAWT-LAFSP 116
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTIL 135
+ +AT + V ++ SGK + G+ I +I Y PDG ++A G D + I
Sbjct: 117 D-SQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 136 DVRKFKPIH 144
D+ K +H
Sbjct: 176 DIATGKLLH 184
Score = 104 (41.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
IA P G+Y A G+ D +++++DI+ + T P+R+++FS + +AS+D +
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 236 IDISNV 241
I I +V
Sbjct: 214 IKIYDV 219
Score = 101 (40.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 41/165 (24%), Positives = 71/165 (43%)
Query: 14 REYTGHKKKVHSVAWNCTGTK-----LASGSVDQTARVWHIEPHGHGKVK-DIELRGHAD 67
++ H + SVAW T K + +GS+D +VW +++ L GH
Sbjct: 10 KQEQAHDDAIWSVAWE-TNKKENIETVVTGSLDDLVKVWKWRDE---RLELQWSLEGHQL 65
Query: 68 SVDQLCWDPKHADLIATASG-DKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAV 125
V + D H IA +S D +RLWD +GK + + + + + PD ++A
Sbjct: 66 GVVSV--DISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQYLAT 123
Query: 126 GNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTG 169
G ++ I V K + G + IA++ G+ +L +G
Sbjct: 124 GTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK--YLASG 166
Score = 82 (33.9 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+A P +F S+D V +WD+ C+ TF + V + ++ G I S +D
Sbjct: 238 VAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQE 297
Query: 236 IDI 238
I +
Sbjct: 298 IHV 300
>CGD|CAL0000345 [details] [associations]
symbol:orf19.587 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000346 "transcription export
complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000345 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 KO:K12880 EMBL:AACQ01000109 EMBL:AACQ01000108
RefSeq:XP_714173.1 RefSeq:XP_714214.1 ProteinModelPortal:Q59X91
STRING:Q59X91 GeneID:3644130 GeneID:3644159 KEGG:cal:CaO19.587
KEGG:cal:CaO19.8219 Uniprot:Q59X91
Length = 397
Score = 163 (62.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 59/279 (21%), Positives = 119/279 (42%)
Query: 22 KVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADL 81
++ +VA N TGT++ D++ R+W P K I + H+ +V+ L ++P
Sbjct: 91 EIITVAINQTGTRVVYSRTDRSVRIWKCLPASVVDPKTI-VDAHSKAVECLSFNPMTEFT 149
Query: 82 IATASGDKTVRLWDARSGKCSQQAELSGENINIT-YKPDGTHIAVGNRDDELTILDV-RK 139
AT + D+ V++W+A +G + + +++ + Y DG + V +R +V
Sbjct: 150 FATVAKDEYVKIWNANTGDKLHEIKCEFDSLKLVRYSNDGQLLVVVDRASNFLFFNVGAN 209
Query: 140 FKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAV-GSADSLVSLWD 198
+K IH+ K + ++ W FFL + + G + Y + G D+ +
Sbjct: 210 YKLIHKFKLDEHIYDLKWFNHDHQFFLVSSHDGSILL-------YEIIDGDGDN-----E 257
Query: 199 ISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFID----ISNVHTGRTVHQIPCRA 254
+S L + + + TI+ S G+Y S + I + N+ + + +
Sbjct: 258 LSSKLRA-SVSGHNSSITTIAISPKGNYFTVGSSEGVISFWKTLENLINSKVITDVDQSI 316
Query: 255 AMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFENA 293
A + + Y +AY D ++ EG ++ N+
Sbjct: 317 AQLDISRDGTYLAVAYDTDSNSRIYEAEGSELVHEIPNS 355
Score = 126 (49.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 34/110 (30%), Positives = 49/110 (44%)
Query: 170 NAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC-VRTFTKLEWPVRTISFSHTGDYIA 228
N+ IAI P G YF VGS++ ++S W E L + T ++ + + S G Y+A
Sbjct: 270 NSSITTIAISPKGNYFTVGSSEGVISFWKTLENLINSKVITDVDQSIAQLDISRDGTYLA 329
Query: 229 SASE-DLFIDISNVHTGRTVHQIPCRAAMN----SVEWNPKYNLLAYAGD 273
A + D I VH+IP + N S+ W P AY D
Sbjct: 330 VAYDTDSNSRIYEAEGSELVHEIPNSGSGNQTFSSIVWFPTKTGFAYTSD 379
>UNIPROTKB|Q59X91 [details] [associations]
symbol:CaO19.587 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000345 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 KO:K12880 EMBL:AACQ01000109 EMBL:AACQ01000108
RefSeq:XP_714173.1 RefSeq:XP_714214.1 ProteinModelPortal:Q59X91
STRING:Q59X91 GeneID:3644130 GeneID:3644159 KEGG:cal:CaO19.587
KEGG:cal:CaO19.8219 Uniprot:Q59X91
Length = 397
Score = 163 (62.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 59/279 (21%), Positives = 119/279 (42%)
Query: 22 KVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADL 81
++ +VA N TGT++ D++ R+W P K I + H+ +V+ L ++P
Sbjct: 91 EIITVAINQTGTRVVYSRTDRSVRIWKCLPASVVDPKTI-VDAHSKAVECLSFNPMTEFT 149
Query: 82 IATASGDKTVRLWDARSGKCSQQAELSGENINIT-YKPDGTHIAVGNRDDELTILDV-RK 139
AT + D+ V++W+A +G + + +++ + Y DG + V +R +V
Sbjct: 150 FATVAKDEYVKIWNANTGDKLHEIKCEFDSLKLVRYSNDGQLLVVVDRASNFLFFNVGAN 209
Query: 140 FKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAV-GSADSLVSLWD 198
+K IH+ K + ++ W FFL + + G + Y + G D+ +
Sbjct: 210 YKLIHKFKLDEHIYDLKWFNHDHQFFLVSSHDGSILL-------YEIIDGDGDN-----E 257
Query: 199 ISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFID----ISNVHTGRTVHQIPCRA 254
+S L + + + TI+ S G+Y S + I + N+ + + +
Sbjct: 258 LSSKLRA-SVSGHNSSITTIAISPKGNYFTVGSSEGVISFWKTLENLINSKVITDVDQSI 316
Query: 255 AMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFENA 293
A + + Y +AY D ++ EG ++ N+
Sbjct: 317 AQLDISRDGTYLAVAYDTDSNSRIYEAEGSELVHEIPNS 355
Score = 126 (49.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 34/110 (30%), Positives = 49/110 (44%)
Query: 170 NAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC-VRTFTKLEWPVRTISFSHTGDYIA 228
N+ IAI P G YF VGS++ ++S W E L + T ++ + + S G Y+A
Sbjct: 270 NSSITTIAISPKGNYFTVGSSEGVISFWKTLENLINSKVITDVDQSIAQLDISRDGTYLA 329
Query: 229 SASE-DLFIDISNVHTGRTVHQIPCRAAMN----SVEWNPKYNLLAYAGD 273
A + D I VH+IP + N S+ W P AY D
Sbjct: 330 VAYDTDSNSRIYEAEGSELVHEIPNSGSGNQTFSSIVWFPTKTGFAYTSD 379
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 123 (48.4 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 26/85 (30%), Positives = 53/85 (62%)
Query: 15 EYTGHKKKVHSVAWNCTG----TKLASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSV 69
+++GH++ + + +C G + +ASGS D +W+++ K +E L GH+ +V
Sbjct: 435 KFSGHRQSKYVIR-SCFGGLDSSFIASGSEDSQVYIWNLK-----NTKPLEVLSGHSMTV 488
Query: 70 DQLCWDPKHADLIATASGDKTVRLW 94
+ + W+PK+ ++A+AS D+T+R+W
Sbjct: 489 NCVSWNPKNPRMLASASDDQTIRIW 513
Score = 117 (46.2 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 34/137 (24%), Positives = 59/137 (43%)
Query: 2 GESSIPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE 61
G IP + + HK +V V ++ +G LA+ S D TA +W + ++K
Sbjct: 208 GRDQIPSETVQI--LVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHT- 264
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT---YKP 118
L H + V + W P L+ T + ++LWD +G + ++ + P
Sbjct: 265 LESHQNPVSFVSWSPDDTKLL-TCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFP 323
Query: 119 DGTHIAVGNRDDELTIL 135
D T + G+ D E I+
Sbjct: 324 DSTRLVCGSSDPERGIV 340
Score = 93 (37.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 28/106 (26%), Positives = 52/106 (49%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDIS----EMLCVRTFTKLEWPVRTISFSHTGDYIASAS 231
++I G++F V + + LWD++ + L + ++ +R+ +IAS S
Sbjct: 403 LSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGS 462
Query: 232 EDLFIDISNVHTGRTVHQIPCRA-AMNSVEWNPKY-NLLAYAGDDK 275
ED + I N+ + + + + +N V WNPK +LA A DD+
Sbjct: 463 EDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQ 508
Score = 73 (30.8 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 25/129 (19%), Positives = 55/129 (42%)
Query: 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHAD-SVD 70
H+ E H+ V V+W+ TKL + + ++W ++ G ++ + +V
Sbjct: 263 HTLE--SHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDT---GVLRHTFGNNNTGFTVS 317
Query: 71 QLCWDPKHADLIATASG-DKTVRLWDARSGKCSQ-QAELSGENINITYKPDGTHIAVGNR 128
W P L+ +S ++ + +WD + + + +++ PDG +
Sbjct: 318 SCAWFPDSTRLVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDGESMITVFS 377
Query: 129 DDELTILDV 137
D E+ IL++
Sbjct: 378 DKEIRILNL 386
Score = 55 (24.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 184 YFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGD-YIASASEDLFIDI 238
+ A GS DS V +W++ + + V +S++ +ASAS+D I I
Sbjct: 457 FIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRI 512
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 163 (62.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 66/279 (23%), Positives = 116/279 (41%)
Query: 17 TGHKKKVHSVAW---NCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-RGHADSVDQL 72
TGH + V V W + L S S+DQT ++W K+K + RGHA SVD +
Sbjct: 137 TGHTEAVKDVTWVKKDSLSCLLLSASIDQTIQLWEWNTE-RNKIKALHCCRGHAGSVDSI 195
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPD--G-THIAVGNRD 129
D + S DK +++W A + + E + + K + G T I +
Sbjct: 196 AVDASRTKF-CSGSWDKMLKIWSAVPSEEEDEYEETSDRPRKKQKTEKMGLTRIPIVTLS 254
Query: 130 DELTILDVRKFKPIHRR-KFGYEVNEIAWNM-TGEMFFLTTGNAGCYCIAIDPMGRYFAV 187
+ + + ++ N W++ TG + GN CI+ P+ + A
Sbjct: 255 GHSEAVSSVLWSDVDEICSASWDHNIKIWDVETGTVKSTLAGNKVFNCISYSPLSQRLAS 314
Query: 188 GSADSLVSLWDI-----SEMLCVRTFTKLEWPVRTISFSHTGDY-IASASEDLFIDISNV 241
GS D + LWD S +LC T + W V ++ +S + + + S S D + + +
Sbjct: 315 GSTDRHIRLWDPRSKDGSLVLCSLT-SHTGW-VTSVKWSPSHEQQLVSGSLDKLVKLWDT 372
Query: 242 HTGRT-VHQIPCRA-AMNSVEWNPKYNLLAYAGDDKNKY 278
+ + ++ + + + SV+W L+ G D Y
Sbjct: 373 RSCKAPLYDLAAHSDKVLSVDWTDA-GLILSGGSDNKLY 410
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 154 (59.3 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 40/122 (32%), Positives = 62/122 (50%)
Query: 18 GHKKKVHSVAWNCTGTK-LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
GH + + V W TG+K LAS S D+T R+W E + L+GH + V + ++P
Sbjct: 94 GHYRGISQVKW-ATGSKYLASASDDKTIRIWDFEKRCSVRC----LKGHTNYVSSIDFNP 148
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTIL 135
L+ + S D+TVR+W+ + G C + E I +++ DGT A + D I
Sbjct: 149 L-GTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIW 207
Query: 136 DV 137
DV
Sbjct: 208 DV 209
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/147 (27%), Positives = 73/147 (49%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH V S+ +N GT L SGS D+T R+W+++ G + L H++ + +
Sbjct: 136 GHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQD---GTCLRM-LPAHSEPIISVSISAD 191
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENI---NITYKPDGTHIAVGNRDDELTI 134
L ATAS D R+WD SG+C + + N+ N+ + + ++ V N + ++ +
Sbjct: 192 -GTLCATASYDGMARIWDVLSGQCLKTL-VEPINVPLSNLQFTENRKYLLVSNLNSQIRL 249
Query: 135 LDVRKFKPIHRRKFGYEVN---EIAWN 158
D R+ + + R F VN ++W+
Sbjct: 250 WDYRRNRVV--RIFDSHVNTRYSMSWD 274
Score = 116 (45.9 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 34/123 (27%), Positives = 60/123 (48%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH+K V V+ + +A+ S D T ++W + L GH + Q+ W
Sbjct: 52 GHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFR----LECTLFGHYRGISQVKW-AT 106
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENI--NITYKPDGTHIAVGNRDDELTIL 135
+ +A+AS DKT+R+WD +CS + N +I + P GT + G+ D+ + I
Sbjct: 107 GSKYLASASDDKTIRIWDFEK-RCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIW 165
Query: 136 DVR 138
+++
Sbjct: 166 NLQ 168
Score = 100 (40.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 28/102 (27%), Positives = 52/102 (50%)
Query: 174 YCIAID--PMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASAS 231
Y +ID P+G GS D V +W++ + C+R P+ ++S S G A+AS
Sbjct: 140 YVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATAS 199
Query: 232 EDLFIDISNVHTGRTVHQI--PCRAAMNSVEW--NPKYNLLA 269
D I +V +G+ + + P ++++++ N KY L++
Sbjct: 200 YDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKYLLVS 241
Score = 71 (30.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 33/130 (25%), Positives = 58/130 (44%)
Query: 45 RVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK--CS 102
R+ + E H G + L GH SV + P IAT+S D T+++W A + + C+
Sbjct: 34 RIRNYESHS-GFSEYCTLFGHEKSVTCVSVSPNKR-WIATSSSDGTIKIWSALTFRLECT 91
Query: 103 QQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYE--VNEIAWNMT 160
G + + + ++A + D + I D K + K G+ V+ I +N
Sbjct: 92 LFGHYRGIS-QVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLK-GHTNYVSSIDFNPL 149
Query: 161 GEMFFLTTGN 170
G + L +G+
Sbjct: 150 GTL--LVSGS 157
Score = 45 (20.9 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 183 RYFAVGSADSLVSLWDISEMLCVRTF 208
+Y V + +S + LWD VR F
Sbjct: 236 KYLLVSNLNSQIRLWDYRRNRVVRIF 261
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 155 (59.6 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 63/242 (26%), Positives = 100/242 (41%)
Query: 15 EYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
E+T GHK ++ VAW+ G AS D+ R+W + K I GH ++ ++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTG-STWSTKTILSDGHKRTIREI 65
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG-ENI--NITYKPDGTHIAVGNRD 129
W P +A+AS D T +W SG+ A L G EN ++++ G +A +RD
Sbjct: 66 RWSPC-GQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
Query: 130 DELTILDVR---KFK-PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYF 185
+ I +V +F+ +V + W+ T E+ + + A DP+
Sbjct: 125 KSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEVLASASYDNTIKMYAEDPVDN-- 182
Query: 186 AVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNV-HTG 244
D WD C T T + I F G+ + S S+D I I H G
Sbjct: 183 -----D-----WD-----CTATLTSHTSTIWGIDFDADGERLVSCSDDTTIKIWKAYHPG 227
Query: 245 RT 246
+
Sbjct: 228 NS 229
Score = 41 (19.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 256 MNSVEWNP 263
+NSV+WNP
Sbjct: 306 VNSVQWNP 313
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 124 (48.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 36/127 (28%), Positives = 62/127 (48%)
Query: 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHAD 80
K + S+A++ G LASG++D ++ I GK+ L GHA + L + P +
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIFDIAT---GKLLHT-LEGHAMPIRSLTFSPD-SQ 203
Query: 81 LIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDV 137
L+ TAS D ++++D + + LSG +N+ + PD TH + D + + DV
Sbjct: 204 LLVTASDDGYIKIYDVQHANLA--GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDV 261
Query: 138 RKFKPIH 144
+H
Sbjct: 262 GTRTCVH 268
Score = 118 (46.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 40/129 (31%), Positives = 64/129 (49%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-VKDIELRGHADSVDQLCWDP 76
GH+ V SV + T AS S+D R+W ++ +GK +K I+ G D+ L + P
Sbjct: 62 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLD---NGKQIKSIDA-GPVDAWT-LAFSP 116
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTIL 135
+ +AT + V ++ SGK + G+ I +I Y PDG ++A G D + I
Sbjct: 117 D-SQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 136 DVRKFKPIH 144
D+ K +H
Sbjct: 176 DIATGKLLH 184
Score = 104 (41.7 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
IA P G+Y A G+ D +++++DI+ + T P+R+++FS + +AS+D +
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 236 IDISNV 241
I I +V
Sbjct: 214 IKIYDV 219
Score = 97 (39.2 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 42/166 (25%), Positives = 72/166 (43%)
Query: 14 REYTGHKKKVHSVAWNCTGTK-----LASGSVDQTARVWHIEPHGHGKVKDIE--LRGHA 66
++ H + SVAW T K + +GS+D +VW + D++ L GH
Sbjct: 10 KQEQAHDDAIWSVAWG-TNKKENSETVVTGSLDDLVKVWK----WCDERLDLQWSLEGHQ 64
Query: 67 DSVDQLCWDPKHADLIATASG-DKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIA 124
V + D H IA +S D +RLWD +GK + + + + + PD ++A
Sbjct: 65 LGVVSV--DISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYLA 122
Query: 125 VGNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTG 169
G ++ I V K + G + IA++ G+ +L +G
Sbjct: 123 TGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK--YLASG 166
Score = 83 (34.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+A P +F S+D V +WD+ CV TF + V + ++ G I S +D
Sbjct: 238 VAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQE 297
Query: 236 IDI 238
I +
Sbjct: 298 IHV 300
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 164 (62.8 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 53/222 (23%), Positives = 99/222 (44%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R TGH+++++S+ ++ G L SGS D+T +W +E G K+ + D V +
Sbjct: 382 RLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEA-GEQKL----ILHTDDGVTTVM 436
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDEL 132
+ P IA S DK +R+W + SG +Q E++ ++ + PDG ++ G+ D+ +
Sbjct: 437 FSPD-GQFIAAGSLDKVIRIWTS-SGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTI 494
Query: 133 TILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADS 192
+ +++ + + E TG F+ + + + P G++ GS D
Sbjct: 495 KLWELQCVSNVAPSMYK-EGGICKQTFTGHKDFILS-------VTVSPDGKWIISGSKDR 546
Query: 193 LVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
+ W T V +++ S G A+ S DL
Sbjct: 547 TIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDL 588
Score = 142 (55.0 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 54/213 (25%), Positives = 96/213 (45%)
Query: 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLI 82
V SVA++ G LA+G DQ R+W I +V + L GH + L + K +
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDI---AQKRVYRL-LTGHEQEIYSLDFS-KDGKTL 403
Query: 83 ATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP 142
+ SGD+TV LWD +G+ + + PDG IA G+ D + I
Sbjct: 404 VSGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWT--SSGT 461
Query: 143 IHRRKFGYE--VNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDIS 200
+ + G+E V +A++ G+ +L +G+ +D + + + ++
Sbjct: 462 LVEQLHGHEESVYSVAFSPDGK--YLVSGS-------LDNTIKLWELQCVSNVAPSMYKE 512
Query: 201 EMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
+C +TFT + + +++ S G +I S S+D
Sbjct: 513 GGICKQTFTGHKDFILSVTVSPDGKWIISGSKD 545
>TAIR|locus:2096254 [details] [associations]
symbol:LRS1 "AT3G05090" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010311 KO:K15361
InterPro:IPR021772 Pfam:PF11816 GO:GO:0080008 HOGENOM:HOG000007343
OMA:NRLYSAG EMBL:AY056292 EMBL:AY127022 EMBL:AY142674 EMBL:BT000631
EMBL:AK226843 IPI:IPI00517137 RefSeq:NP_566246.1 RefSeq:NP_850516.1
UniGene:At.48620 ProteinModelPortal:Q93ZS6 SMR:Q93ZS6 PaxDb:Q93ZS6
PRIDE:Q93ZS6 EnsemblPlants:AT3G05090.1 EnsemblPlants:AT3G05090.2
GeneID:819671 KEGG:ath:AT3G05090 TAIR:At3g05090 InParanoid:Q93ZS6
PhylomeDB:Q93ZS6 ProtClustDB:CLSN2688081 ArrayExpress:Q93ZS6
Genevestigator:Q93ZS6 Uniprot:Q93ZS6
Length = 753
Score = 165 (63.1 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 40/121 (33%), Positives = 62/121 (51%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GHK+ V+++A N TGT L SG ++ RVW +P G K ++LRGH D+V L D
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVW--DPRT-GS-KSMKLRGHTDNVRVLLLDST 266
Query: 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTILD 136
+ S D +RLWD +C + +++ + P +H+ G RD L + D
Sbjct: 267 -GRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTD 325
Query: 137 V 137
+
Sbjct: 326 L 326
Score = 40 (19.1 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 183 RYFAVGSADSLVSLWDISEMLCVRTFTKLEW 213
R A V LWDI+ + V + K+ +
Sbjct: 426 RQILTKDAAGSVKLWDITRGVVVEDYGKISF 456
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 164 (62.8 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 48/190 (25%), Positives = 87/190 (45%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+E GH K V ++ + G +ASGS D+T ++W G ++ L GH D+V+++
Sbjct: 931 QEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAAT---GDLQKT-LTGHLDTVEKVV 986
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELT 133
+ + +++ +S + V++WDA +GK E + PDG HIA G+ + +
Sbjct: 987 FSLDNRQIVSCSS--EAVKIWDAATGKVQNSFESDDVFTIVAVSPDGKHIASGHCNGRIK 1044
Query: 134 ILDVRK---FKPI--HRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVG 188
+ D+ K + +R KF V +++ + T G + P +
Sbjct: 1045 LWDMATGSLLKTMAGYRSKFDSLVTTEVFDIQLQEAIFNTQITG---LVFSPDAKLILST 1101
Query: 189 SADSLVSLWD 198
S D + LWD
Sbjct: 1102 STDRAIKLWD 1111
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 67/280 (23%), Positives = 118/280 (42%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH + ++A++ +L +GSVD T R+W+ G ++ + GH +V +
Sbjct: 772 GHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTT---GDLEKTFV-GHTGTVLSVAISSD 827
Query: 78 HADLIATASGD-KTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILD 136
++ SG + V+LWDA +G + SG ++ + PD IA G +D ++ I D
Sbjct: 828 GRQIV---SGSIEAVKLWDAATGDLLKTLA-SGFAGSVAFSPDSRQIAAGFKDGKIFIWD 883
Query: 137 VRKF--KPIHRRK-------FGYEVNEIA----------WNMT-GEMFFLTTGNAGCYCI 176
K + R F +V ++ W++T G + + +
Sbjct: 884 AAGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAVGHSKHVTTM 943
Query: 177 AIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFI 236
+ P G+ A GSAD + LWD + +T T V + FS I S S + +
Sbjct: 944 VLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSEA-V 1002
Query: 237 DISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKN 276
I + TG+ NS E + + ++A + D K+
Sbjct: 1003 KIWDAATGKV---------QNSFESDDVFTIVAVSPDGKH 1033
Score = 47 (21.6 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 213 WPVRTISFSHTGDYIASASEDLFIDISNV 241
W + +++FS G +IA+AS D I + ++
Sbjct: 1142 W-IFSVAFSSDGQHIAAASADKTIRVWSI 1169
>UNIPROTKB|F1SQA9 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005635 "nuclear envelope" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005635 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 GeneTree:ENSGT00550000075049 EMBL:CU469341
Ensembl:ENSSSCT00000012664 OMA:REISADH Uniprot:F1SQA9
Length = 158
Score = 140 (54.3 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 34/125 (27%), Positives = 69/125 (55%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW-D 75
T H+ +H + GT+LA+ S D++ +++ + +G G++ +LRGH V Q+ W
Sbjct: 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVR-NG-GQILIADLRGHEGPVWQVAWAH 67
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN--IN-ITYKPD--GTHIAVGNRDD 130
P + +++A+ S D+ V +W +G + E +G + +N + + P G +A G+ D
Sbjct: 68 PMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDG 127
Query: 131 ELTIL 135
+++L
Sbjct: 128 AISLL 132
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 110 (43.8 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 44/162 (27%), Positives = 67/162 (41%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75
+ GH KK+++V + S S D RVW + D+ H V + +
Sbjct: 247 FKGHNKKINAVVLHPDNITAISASADSHIRVWSATDSSSKAIIDV----HQAPVTDISLN 302
Query: 76 PKHADLIATASGDKTVRLWDARSGK--CSQQAELSGENI---NITYKPDGTHIAVGNRDD 130
D I +AS D D RSGK C E G I +I + PDG G D
Sbjct: 303 AS-GDYILSASDDSYWAFSDIRSGKSLCKVSVE-PGSQIAVHSIEFHPDGLIFGTGAADA 360
Query: 131 ELTILDVRKFKPIHRRKFGYE--VNEIAWNMTGEMFFLTTGN 170
+ I D++ + + G+ V IA++ G ++L TG+
Sbjct: 361 VVKIWDLKN-QTVAAAFPGHTAAVRSIAFSENG--YYLATGS 399
Score = 97 (39.2 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE-WPVRTISFSHTGDYI 227
IA G Y A GS D V LWD+ ++ ++TF E P+ ++SF TG ++
Sbjct: 386 IAFSENGYYLATGSEDGEVKLWDLRKLKNLKTFANEEKQPINSLSFDMTGTFL 438
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 128 (50.1 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 39/128 (30%), Positives = 64/128 (50%)
Query: 157 WNM-TGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ TG+ + G+ G C +A+ P R F G+ D+ LWD+ E C +TFT E
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDFRLFISGACDASAKLWDVREGTCRQTFTGHESD 228
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTV----HQ-IPCRAAMNSVEWNPKYNLLA 269
+ I F G+ I + S+D + ++ + + H+ I C + SV ++ LL
Sbjct: 229 INAICFFPNGEAICTGSDDASCRLFDLRADQELTTYAHESIIC--GITSVAFSLSGRLL- 285
Query: 270 YAG-DDKN 276
+AG DD N
Sbjct: 286 FAGYDDFN 293
Score = 121 (47.7 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 41/167 (24%), Positives = 71/167 (42%)
Query: 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
SRE + H + + + + S D T +W IE G+ K + + GH L
Sbjct: 136 SRELSAHTGYLSCCRF-LDDNNIVTSSGDTTCALWDIET---GQQKTVFV-GHTGDCMSL 190
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDE 131
P I+ A D + +LWD R G C Q +IN I + P+G I G+ D
Sbjct: 191 AVSPDFRLFISGAC-DASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDAS 249
Query: 132 LTILDVRKFKPIHRRKFGYE-----VNEIAWNMTGEMFFLTTGNAGC 173
+ D+R + + + +E + +A++++G + F + C
Sbjct: 250 CRLFDLRADQEL--TTYAHESIICGITSVAFSLSGRLLFAGYDDFNC 294
Score = 70 (29.7 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENINITYKPDG 120
LRGH + + W + L+ +AS D + +WD + L S + Y P G
Sbjct: 51 LRGHLAKIYAMHW-ATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 121 THIAVGNRDDELTILDVR 138
+A G D+ +I ++
Sbjct: 110 NFVACGGLDNMCSIYSLK 127
Score = 64 (27.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 29/128 (22%), Positives = 46/128 (35%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH K++++ W L S S D VW + + KV I LR S C
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVW--DTYTTNKVHAIPLRS---SWVMTC 103
Query: 74 WDPKHADLIATASGDKTVRLWD--ARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD 129
+ +A D ++ +R G ELS ++ D +I + D
Sbjct: 104 AYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGD 163
Query: 130 DELTILDV 137
+ D+
Sbjct: 164 TTCALWDI 171
>UNIPROTKB|A8XJ40 [details] [associations]
symbol:npp-20 "Protein SEC13 homolog" species:6238
"Caenorhabditis briggsae" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0005643 "nuclear pore" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0005643 GO:GO:0000910
GO:GO:0051028 HOGENOM:HOG000216895 EMBL:HE601467
ProteinModelPortal:A8XJ40 STRING:A8XJ40 EnsemblMetazoa:CBG13889
WormBase:CBG13889 Uniprot:A8XJ40
Length = 306
Score = 156 (60.0 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 72/292 (24%), Positives = 131/292 (44%)
Query: 11 LHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVD 70
+ R T H+ +H N G +LA+ D+ +++ + P+G IEL GH V
Sbjct: 4 IRQRIDTQHRDAIHDAQLNIYGNRLATCGSDRLVKIFEVRPNGQSYPL-IELSGHNGPVW 62
Query: 71 QLCW-DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT---YKPD--GTHIA 124
++ W PK+ L+A+AS DK V +W +G+ + E ++T + P G +A
Sbjct: 63 KVSWAHPKYGGLLASASYDKKVIIWQEVNGRWQKTYEWETHEASVTSVAFAPHQFGLMLA 122
Query: 125 VGNRDDELTIL--DVRKFK-PIHRRKFGYE--VNEIAWNMTGEMFFLTTGNAGCYCIAID 179
+ D + IL D + + R + ++ VN ++W G A D
Sbjct: 123 SSSADGTIGILRFDAQTQQWQSSRIQNCHDQGVNSVSW---------APGTA-------D 166
Query: 180 PMG--RYFAVGSADSLVSLW----DISEMLCVRTFTKLEWPVRTISF---SHTGDY-IAS 229
P G R+ + G+ D LV +W +++E C + + VR ++ ++ G + I S
Sbjct: 167 PAGKKRFVSAGN-DKLVKIWLLNEELNEWTCEKAIHCHKDFVREAAWCPVTNKGQHSIVS 225
Query: 230 ASED---LFIDISNVHTG----RTVHQIPCRAAMNSVEWNPKYNLLAYAGDD 274
D + I+++ T + + Q PC A+ ++P + L+ +GDD
Sbjct: 226 CGLDGNLVLYRIADIETAEWKSKLLEQAPC--ALYHASFSPCGSFLSVSGDD 275
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 152 (58.6 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 63/242 (26%), Positives = 104/242 (42%)
Query: 15 EYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
E+T GHK ++ VAW+ G AS D+ R+W + + K I GH ++ ++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWS-TKTILSDGHKRTIREI 65
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG-ENI--NITYKPDGTHIAVGNRD 129
W P +A+AS D T +W SG+ A L G EN ++++ G +A +RD
Sbjct: 66 QWSPC-GQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
Query: 130 DELTILDVR---KFK-PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYF 185
+ I +V +F+ +V + W+ T E+ L + + Y D + +
Sbjct: 125 KSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEI--LASAS---Y----DNTIKMY 175
Query: 186 AVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNV-HTG 244
A D+ WD C T T + I F G+ + S S+D + I H G
Sbjct: 176 AEEPIDND---WD-----CTATLTSHTSTIWGIDFDADGERLVSCSDDTTVKIWRAYHPG 227
Query: 245 RT 246
+
Sbjct: 228 NS 229
Score = 41 (19.5 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 256 MNSVEWNP 263
+NSV+WNP
Sbjct: 306 VNSVQWNP 313
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 161 (61.7 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 55/220 (25%), Positives = 102/220 (46%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75
++GH++ ++S+ ++ G + SGS D+TAR+W +E G +K +E+ + V +
Sbjct: 398 FSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVET-GQCILK-LEIE---NGVTAIAIS 452
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTI 134
P IA S D+ +R+W SG ++ E E++ +I + PD + + G+ D + +
Sbjct: 453 PND-QFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKV 510
Query: 135 LDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLV 194
+++ + + E TG F+ + +A+ P R+ GS D +
Sbjct: 511 WELQATRSVGLSAIKPE-GICKATYTGHTDFVLS-------VAVSPDSRWGLSGSKDRSM 562
Query: 195 SLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
WD+ T + V ++ FS G AS S DL
Sbjct: 563 QFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDL 602
Score = 147 (56.8 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 58/239 (24%), Positives = 109/239 (45%)
Query: 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH-ADL 81
V ++A++ G L +G+ D+ ++W + KV+ + GH + L D H
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQ---KVRYV-FSGHEQDIYSL--DFSHNGRF 416
Query: 82 IATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFK 141
I + SGD+T RLWD +G+C + E+ I P+ IAVG+ D + + V
Sbjct: 417 IVSGSGDRTARLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSG-- 474
Query: 142 PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDIS- 200
+ R G++ + + + + L +G+ +D + + + + S V L I
Sbjct: 475 TLVERLEGHKESVYSIAFSPDSSILLSGS-------LDKTIKVWELQATRS-VGLSAIKP 526
Query: 201 EMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSV 259
E +C T+T V +++ S + S S+D + ++ TG++ + C+ NSV
Sbjct: 527 EGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSY--LTCQGHKNSV 583
Score = 127 (49.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 27/100 (27%), Positives = 48/100 (48%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
IA P G+Y G+ D + LWD+S F+ E + ++ FSH G +I S S D
Sbjct: 366 IAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRT 425
Query: 236 IDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDK 275
+ +V TG+ + ++ + ++ +P +A D+
Sbjct: 426 ARLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQ 465
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 44/170 (25%), Positives = 77/170 (45%)
Query: 35 LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94
+A GS+DQ RVW + G + + L GH +SV + + P + ++ + S DKT+++W
Sbjct: 458 IAVGSLDQIIRVWSVS----GTLVE-RLEGHKESVYSIAFSPD-SSILLSGSLDKTIKVW 511
Query: 95 DARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF-GYEV 152
+ ++ + + + E I TY G+ D L++ P R G +
Sbjct: 512 ELQATRSVGLSAIKPEGICKATY--------TGHTDFVLSVA----VSPDSRWGLSGSKD 559
Query: 153 NEIA-WNM-TGEMFFLTTGNAGCYC-IAIDPMGRYFAVGSADSLVSLWDI 199
+ W++ TG+ + G+ + P GR FA GS D +W I
Sbjct: 560 RSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSI 609
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 35/134 (26%), Positives = 65/134 (48%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPH---GHGKVKDIEL-----RGHADSV 69
GHK+ V+S+A++ + L SGS+D+T +VW ++ G +K + GH D V
Sbjct: 482 GHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFV 541
Query: 70 DQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN-INITYKPDGTHIAVGNR 128
+ P ++ S D++++ WD ++G+ + + I++ + PDG A G+
Sbjct: 542 LSVAVSPDSRWGLS-GSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSG 600
Query: 129 DDELTILDVRKFKP 142
D I + P
Sbjct: 601 DLRARIWSIDPASP 614
>POMBASE|SPBC215.15 [details] [associations]
symbol:sec13 "COPII-coated vesicle component Sec13"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005643 "nuclear pore" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006999
"nuclear pore organization" evidence=ISO] [GO:0030127 "COPII
vesicle coat" evidence=ISO] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0071937 "barrier septum assembly involved in cell
cycle cytokinesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC215.15 GO:GO:0005829
GO:GO:0005886 GO:GO:0006886 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0005789 EMBL:CU329671 eggNOG:COG2319 GO:GO:0005643
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0051028 GO:GO:0071937
GO:GO:0030127 GO:GO:0006999 HOGENOM:HOG000216895 KO:K14004
OMA:IKLWKEE OrthoDB:EOG4QNR53 PIR:T39905 RefSeq:NP_596692.1
ProteinModelPortal:O94319 STRING:O94319 PRIDE:O94319
EnsemblFungi:SPBC215.15.1 GeneID:2540716 KEGG:spo:SPBC215.15
NextBio:20801838 Uniprot:O94319
Length = 297
Score = 155 (59.6 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 76/285 (26%), Positives = 131/285 (45%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW-D 75
T H +H + G +LA+ S DQT +V+ IE + ++ LRGH+ V QL W
Sbjct: 6 TQHDDMIHDAILDYYGKRLATCSSDQTIKVFSIENNQQTLLET--LRGHSGPVWQLGWAH 63
Query: 76 PKHADLIATASGDKTVRLWDARSGKCSQQAELSGE--NIN-ITYKPD--GTHIAVGNRDD 130
PK ++A+AS D V +W G S+ + + ++N +++ P G +A + D
Sbjct: 64 PKFGTILASASYDGHVIVWRETGGVWSELMDHTAHQASVNAVSWAPHEYGALLACASSDG 123
Query: 131 ELTILDVRKFKPIHRRKF-GYE--VNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAV 187
++++L+ + R F +E N + W+ +G+ A P + A
Sbjct: 124 KVSVLEFKDDGSCDTRIFTAHEPGCNAVCWSPPS-----LSGSVVGQSPAAGP--KKLAT 176
Query: 188 GSADSLVSLW--D--ISEMLCVRTFT-KLEWPVRTISFSH----TGDYIASASED--LFI 236
D+LV +W D ++ + T ++W R ++++ T Y+ASAS+D +FI
Sbjct: 177 AGCDNLVKIWAFDAGVNNWILEDTLAGHVDW-TRDVAWAPSVGLTKTYLASASQDKNVFI 235
Query: 237 -----DISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYA-GDDK 275
D T T + P A V W+ N+LA + GD+K
Sbjct: 236 WTKEGDGPWQKTPLTEEKFPDIAWR--VSWSLSGNILAVSCGDNK 278
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 156 (60.0 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 41/150 (27%), Positives = 79/150 (52%)
Query: 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
+R + GH K V SVA++ ++ S S D+T ++W+ G K E GH + V +
Sbjct: 98 TRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL--GECKYTISEADGHKEWVSCV 155
Query: 73 CWDPKH-ADLIATASGDKTVRLWDARSGKCSQQAELSGEN--IN-ITYKPDGTHIAVGNR 128
+ P I +AS DKTV++W+ ++ C + L+G + +N + PDG+ A G +
Sbjct: 156 RFSPNTLVPTIVSASWDKTVKVWNLQN--CKLRNTLAGHSGYLNTVAVSPDGSLCASGGK 213
Query: 129 DDELTILDVRKFKPIHRRKFGYEVNEIAWN 158
D + + D+ + K ++ + G ++ + ++
Sbjct: 214 DGVILLWDLAEGKKLYSLEAGSIIHSLCFS 243
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 120 (47.3 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 157 WNM-TGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ TG+ TG+ G +++ P R F G+ D+ LWD+ E +C +TFT E
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTV----HQ-IPCRAAMNSVEWNPKYNLLA 269
+ I F G+ A+ S+D + ++ + + H I C + SV ++ LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIIC--GITSVSFSKSGRLLL 286
Query: 270 YAGDDKN 276
DD N
Sbjct: 287 AGYDDFN 293
Score = 112 (44.5 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 41/156 (26%), Positives = 73/156 (46%)
Query: 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK-DIELRGHADSVDQLCWDPKHADL 81
V + A+ +G +A G +D +++++ G V+ EL GH + C +
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTR-EGNVRVSRELAGHTGYLS--CCRFLDDNQ 156
Query: 82 IATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDELTILDVRKF 140
I T+SGD T LWD +G+ + +G+ ++++ PD G D + DVR+
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE- 215
Query: 141 KPIHRRKF-GYE--VNEIAWNMTGEMFFLTTGNAGC 173
+ R+ F G+E +N I + G F + +A C
Sbjct: 216 -GMCRQTFTGHESDINAICFFPNGNAFATGSDDATC 250
Score = 106 (42.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 34/130 (26%), Positives = 61/130 (46%)
Query: 16 YTGHKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
+TGH V S++ T+L SG+ D +A++W + G + GH ++ +C+
Sbjct: 180 FTGHTGDVMSLSL-APDTRLFVSGACDASAKLWDVR---EGMCRQT-FTGHESDINAICF 234
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-----NITYKPDGTHIAVGNRD 129
P + + AT S D T RL+D R+ + + S +NI ++++ G + G D
Sbjct: 235 FP-NGNAFATGSDDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291
Query: 130 DELTILDVRK 139
+ D K
Sbjct: 292 FNCNVWDALK 301
Score = 78 (32.5 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 48 HIEPHGHGKVKDIE-LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAE 106
+I+P G +++ LRGH + + W + L+ +AS D + +WD+ +
Sbjct: 36 NIDPVGRIQMRTRRTLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIP 94
Query: 107 L-SGENINITYKPDGTHIAVGNRDDELTILDVR 138
L S + Y P G ++A G D+ +I +++
Sbjct: 95 LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127
Score = 65 (27.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 28/128 (21%), Positives = 46/128 (35%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH K++++ W L S S D +W + + KV I LR S C
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIW--DSYTTNKVHAIPLRS---SWVMTC 103
Query: 74 WDPKHADLIATASGDKTVRLWD--ARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD 129
+ +A D +++ R G EL+G ++ D I + D
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGD 163
Query: 130 DELTILDV 137
+ D+
Sbjct: 164 TTCALWDI 171
Score = 47 (21.6 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWD 198
C+ + G A GS DS + +W+
Sbjct: 317 CLGVTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 120 (47.3 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 157 WNM-TGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ TG+ TG+ G +++ P R F G+ D+ LWD+ E +C +TFT E
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTV----HQ-IPCRAAMNSVEWNPKYNLLA 269
+ I F G+ A+ S+D + ++ + + H I C + SV ++ LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIIC--GITSVSFSKSGRLLL 286
Query: 270 YAGDDKN 276
DD N
Sbjct: 287 AGYDDFN 293
Score = 112 (44.5 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 41/156 (26%), Positives = 73/156 (46%)
Query: 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK-DIELRGHADSVDQLCWDPKHADL 81
V + A+ +G +A G +D +++++ G V+ EL GH + C +
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTR-EGNVRVSRELAGHTGYLS--CCRFLDDNQ 156
Query: 82 IATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDELTILDVRKF 140
I T+SGD T LWD +G+ + +G+ ++++ PD G D + DVR+
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE- 215
Query: 141 KPIHRRKF-GYE--VNEIAWNMTGEMFFLTTGNAGC 173
+ R+ F G+E +N I + G F + +A C
Sbjct: 216 -GMCRQTFTGHESDINAICFFPNGNAFATGSDDATC 250
Score = 106 (42.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 34/130 (26%), Positives = 61/130 (46%)
Query: 16 YTGHKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
+TGH V S++ T+L SG+ D +A++W + G + GH ++ +C+
Sbjct: 180 FTGHTGDVMSLSL-APDTRLFVSGACDASAKLWDVR---EGMCRQT-FTGHESDINAICF 234
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-----NITYKPDGTHIAVGNRD 129
P + + AT S D T RL+D R+ + + S +NI ++++ G + G D
Sbjct: 235 FP-NGNAFATGSDDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291
Query: 130 DELTILDVRK 139
+ D K
Sbjct: 292 FNCNVWDALK 301
Score = 78 (32.5 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 48 HIEPHGHGKVKDIE-LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAE 106
+I+P G +++ LRGH + + W + L+ +AS D + +WD+ +
Sbjct: 36 NIDPVGRIQMRTRRTLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIP 94
Query: 107 L-SGENINITYKPDGTHIAVGNRDDELTILDVR 138
L S + Y P G ++A G D+ +I +++
Sbjct: 95 LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127
Score = 65 (27.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 28/128 (21%), Positives = 46/128 (35%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH K++++ W L S S D +W + + KV I LR S C
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIW--DSYTTNKVHAIPLRS---SWVMTC 103
Query: 74 WDPKHADLIATASGDKTVRLWD--ARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD 129
+ +A D +++ R G EL+G ++ D I + D
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGD 163
Query: 130 DELTILDV 137
+ D+
Sbjct: 164 TTCALWDI 171
Score = 47 (21.6 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWD 198
C+ + G A GS DS + +W+
Sbjct: 317 CLGVTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 120 (47.3 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 157 WNM-TGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ TG+ TG+ G +++ P R F G+ D+ LWD+ E +C +TFT E
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTV----HQ-IPCRAAMNSVEWNPKYNLLA 269
+ I F G+ A+ S+D + ++ + + H I C + SV ++ LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIIC--GITSVSFSKSGRLLL 286
Query: 270 YAGDDKN 276
DD N
Sbjct: 287 AGYDDFN 293
Score = 112 (44.5 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 41/156 (26%), Positives = 73/156 (46%)
Query: 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK-DIELRGHADSVDQLCWDPKHADL 81
V + A+ +G +A G +D +++++ G V+ EL GH + C +
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTR-EGNVRVSRELAGHTGYLS--CCRFLDDNQ 156
Query: 82 IATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDELTILDVRKF 140
I T+SGD T LWD +G+ + +G+ ++++ PD G D + DVR+
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE- 215
Query: 141 KPIHRRKF-GYE--VNEIAWNMTGEMFFLTTGNAGC 173
+ R+ F G+E +N I + G F + +A C
Sbjct: 216 -GMCRQTFTGHESDINAICFFPNGNAFATGSDDATC 250
Score = 106 (42.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 34/130 (26%), Positives = 61/130 (46%)
Query: 16 YTGHKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
+TGH V S++ T+L SG+ D +A++W + G + GH ++ +C+
Sbjct: 180 FTGHTGDVMSLSL-APDTRLFVSGACDASAKLWDVR---EGMCRQT-FTGHESDINAICF 234
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-----NITYKPDGTHIAVGNRD 129
P + + AT S D T RL+D R+ + + S +NI ++++ G + G D
Sbjct: 235 FP-NGNAFATGSDDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291
Query: 130 DELTILDVRK 139
+ D K
Sbjct: 292 FNCNVWDALK 301
Score = 78 (32.5 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 48 HIEPHGHGKVKDIE-LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAE 106
+I+P G +++ LRGH + + W + L+ +AS D + +WD+ +
Sbjct: 36 NIDPVGRIQMRTRRTLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIP 94
Query: 107 L-SGENINITYKPDGTHIAVGNRDDELTILDVR 138
L S + Y P G ++A G D+ +I +++
Sbjct: 95 LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127
Score = 65 (27.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 28/128 (21%), Positives = 46/128 (35%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH K++++ W L S S D +W + + KV I LR S C
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIW--DSYTTNKVHAIPLRS---SWVMTC 103
Query: 74 WDPKHADLIATASGDKTVRLWD--ARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD 129
+ +A D +++ R G EL+G ++ D I + D
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGD 163
Query: 130 DELTILDV 137
+ D+
Sbjct: 164 TTCALWDI 171
Score = 47 (21.6 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWD 198
C+ + G A GS DS + +W+
Sbjct: 317 CLGVTDDGMAVATGSWDSFLKIWN 340
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 120 (47.3 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 157 WNM-TGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ TG+ TG+ G +++ P R F G+ D+ LWD+ E +C +TFT E
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTV----HQ-IPCRAAMNSVEWNPKYNLLA 269
+ I F G+ A+ S+D + ++ + + H I C + SV ++ LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIIC--GITSVSFSKSGRLLL 286
Query: 270 YAGDDKN 276
DD N
Sbjct: 287 AGYDDFN 293
Score = 112 (44.5 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 41/156 (26%), Positives = 73/156 (46%)
Query: 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK-DIELRGHADSVDQLCWDPKHADL 81
V + A+ +G +A G +D +++++ G V+ EL GH + C +
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTR-EGNVRVSRELAGHTGYLS--CCRFLDDNQ 156
Query: 82 IATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDELTILDVRKF 140
I T+SGD T LWD +G+ + +G+ ++++ PD G D + DVR+
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE- 215
Query: 141 KPIHRRKF-GYE--VNEIAWNMTGEMFFLTTGNAGC 173
+ R+ F G+E +N I + G F + +A C
Sbjct: 216 -GMCRQTFTGHESDINAICFFPNGNAFATGSDDATC 250
Score = 106 (42.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 34/130 (26%), Positives = 61/130 (46%)
Query: 16 YTGHKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
+TGH V S++ T+L SG+ D +A++W + G + GH ++ +C+
Sbjct: 180 FTGHTGDVMSLSL-APDTRLFVSGACDASAKLWDVR---EGMCRQT-FTGHESDINAICF 234
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-----NITYKPDGTHIAVGNRD 129
P + + AT S D T RL+D R+ + + S +NI ++++ G + G D
Sbjct: 235 FP-NGNAFATGSDDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291
Query: 130 DELTILDVRK 139
+ D K
Sbjct: 292 FNCNVWDALK 301
Score = 78 (32.5 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 48 HIEPHGHGKVKDIE-LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAE 106
+I+P G +++ LRGH + + W + L+ +AS D + +WD+ +
Sbjct: 36 NIDPVGRIQMRTRRTLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIP 94
Query: 107 L-SGENINITYKPDGTHIAVGNRDDELTILDVR 138
L S + Y P G ++A G D+ +I +++
Sbjct: 95 LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127
Score = 65 (27.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 28/128 (21%), Positives = 46/128 (35%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH K++++ W L S S D +W + + KV I LR S C
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIW--DSYTTNKVHAIPLRS---SWVMTC 103
Query: 74 WDPKHADLIATASGDKTVRLWD--ARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD 129
+ +A D +++ R G EL+G ++ D I + D
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGD 163
Query: 130 DELTILDV 137
+ D+
Sbjct: 164 TTCALWDI 171
Score = 47 (21.6 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWD 198
C+ + G A GS DS + +W+
Sbjct: 317 CLGVTDDGMAVATGSWDSFLKIWN 340
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 120 (47.3 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 157 WNM-TGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ TG+ TG+ G +++ P R F G+ D+ LWD+ E +C +TFT E
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTV----HQ-IPCRAAMNSVEWNPKYNLLA 269
+ I F G+ A+ S+D + ++ + + H I C + SV ++ LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIIC--GITSVSFSKSGRLLL 286
Query: 270 YAGDDKN 276
DD N
Sbjct: 287 AGYDDFN 293
Score = 112 (44.5 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 41/156 (26%), Positives = 73/156 (46%)
Query: 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK-DIELRGHADSVDQLCWDPKHADL 81
V + A+ +G +A G +D +++++ G V+ EL GH + C +
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTR-EGNVRVSRELAGHTGYLS--CCRFLDDNQ 156
Query: 82 IATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDELTILDVRKF 140
I T+SGD T LWD +G+ + +G+ ++++ PD G D + DVR+
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE- 215
Query: 141 KPIHRRKF-GYE--VNEIAWNMTGEMFFLTTGNAGC 173
+ R+ F G+E +N I + G F + +A C
Sbjct: 216 -GMCRQTFTGHESDINAICFFPNGNAFATGSDDATC 250
Score = 106 (42.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 34/130 (26%), Positives = 61/130 (46%)
Query: 16 YTGHKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
+TGH V S++ T+L SG+ D +A++W + G + GH ++ +C+
Sbjct: 180 FTGHTGDVMSLSL-APDTRLFVSGACDASAKLWDVR---EGMCRQT-FTGHESDINAICF 234
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI-----NITYKPDGTHIAVGNRD 129
P + + AT S D T RL+D R+ + + S +NI ++++ G + G D
Sbjct: 235 FP-NGNAFATGSDDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291
Query: 130 DELTILDVRK 139
+ D K
Sbjct: 292 FNCNVWDALK 301
Score = 78 (32.5 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 48 HIEPHGHGKVKDIE-LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAE 106
+I+P G +++ LRGH + + W + L+ +AS D + +WD+ +
Sbjct: 36 NIDPVGRIQMRTRRTLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIP 94
Query: 107 L-SGENINITYKPDGTHIAVGNRDDELTILDVR 138
L S + Y P G ++A G D+ +I +++
Sbjct: 95 LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127
Score = 65 (27.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 28/128 (21%), Positives = 46/128 (35%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH K++++ W L S S D +W + + KV I LR S C
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIW--DSYTTNKVHAIPLRS---SWVMTC 103
Query: 74 WDPKHADLIATASGDKTVRLWD--ARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD 129
+ +A D +++ R G EL+G ++ D I + D
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGD 163
Query: 130 DELTILDV 137
+ D+
Sbjct: 164 TTCALWDI 171
Score = 47 (21.6 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 175 CIAIDPMGRYFAVGSADSLVSLWD 198
C+ + G A GS DS + +W+
Sbjct: 317 CLGVTDDGMAVATGSWDSFLKIWN 340
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 145 (56.1 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 52/208 (25%), Positives = 96/208 (46%)
Query: 6 IPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQ-TARVWHIEPHGHGKVKDIELRG 64
I F+N + T + + + +A + +G + GS D VW ++ G++ D L G
Sbjct: 411 IRFRNFKTFTATS-RVQFNCLAVDPSGEVIVGGSQDTFEIYVWSVQT---GQLLD-SLTG 465
Query: 65 HADSVDQLCWDPKHADLIATASGDKTVRLWDARS-GKCSQQAELSGENINITYKPDGTHI 123
H + L + K ++A+AS DKT+R+W+ S + + E+ + + +T +PD +
Sbjct: 466 HEGPISCLTFG-KENSILASASWDKTIRIWNIFSRNQTVEPIEIQSDALCLTMRPDCKEL 524
Query: 124 AVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCY--CIAIDPM 181
AV D +TI D+ K +H ++ + + F N G Y IA
Sbjct: 525 AVSTLDGHVTIFDIEDAKQLHLIDGRKDI--VNGRYLEDKFIAKNSNRGKYFSTIAYSFD 582
Query: 182 G-RYFAVGSADSLVSLWDISEMLCVRTF 208
G A G+ +S + ++DI + ++ F
Sbjct: 583 GLTLLAAGNNNS-ICMYDIENEVLLKRF 609
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 53/240 (22%), Positives = 96/240 (40%)
Query: 10 NLHSREYTGH---KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-----VKDIE 61
N SR H K KV+ + ++ G A ++D+ +VW + V+
Sbjct: 83 NFVSRVVLHHFNFKSKVNDIKFSPCGKYFAI-AIDRFIQVWKTPDLTEDRQFAPFVRHRI 141
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKP 118
GH D V + W I+T S D T +++ S + SG IN +
Sbjct: 142 YSGHFDEVLNISWSLDSRFFIST-SKDMTAKIFSLNSDEKDVAMTFSGHRDYVINAFFSH 200
Query: 119 DGTHIAVGNRDDELTILD-VRKFKPIHRRKFGYEV---NEIAWNMTGEMFFLTTGNAGCY 174
D I ++D L + + KP + + ++W +T + FF G C
Sbjct: 201 DQEIIYTVSKDGALFKWEYTERPKPENEDSDSEDDATDKPMSWRITAKNFFYADGKLKCA 260
Query: 175 CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
C P + VG + L++I + +++ + + V T++ + TG+++A S L
Sbjct: 261 CF--HPQSKLLVVGFTNGEFRLYEIEDFNLIQSLSMGQNAVNTVNINKTGEWLAFGSAKL 318
Score = 108 (43.1 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 32/120 (26%), Positives = 58/120 (48%)
Query: 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLI 82
V++V N TG LA GS + ++ E + ++ +GH DS++ LC+ P + L+
Sbjct: 299 VNTVNINKTGEWLAFGSA-KLGQLLVYEWQSESYI--LKQQGHFDSMNTLCYSPDGSRLV 355
Query: 83 ATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFK 141
T S D +++WD RSG C E + + + G + + D + D+ +F+
Sbjct: 356 -TGSDDGKIKIWDVRSGFCLMTFTEHTSAVTQVQFAKRGQVLFSSSLDGTIRAWDLIRFR 414
Score = 103 (41.3 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 29/107 (27%), Positives = 47/107 (43%)
Query: 165 FLTTGNAGCYCIAIDPMGRYFAVGSADSL-VSLWDISEMLCVRTFTKLEWPVRTISFSHT 223
F T C+A+DP G GS D+ + +W + + + T E P+ ++F
Sbjct: 419 FTATSRVQFNCLAVDPSGEVIVGGSQDTFEIYVWSVQTGQLLDSLTGHEGPISCLTFGKE 478
Query: 224 GDYIASASEDLFIDISNVHT-GRTVHQIPCRAAMNSVEWNPKYNLLA 269
+ASAS D I I N+ + +TV I ++ + P LA
Sbjct: 479 NSILASASWDKTIRIWNIFSRNQTVEPIEIQSDALCLTMRPDCKELA 525
Score = 76 (31.8 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 87 GDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRK-FKPIHR 145
G V W + S QQ N + Y PDG+ + G+ D ++ I DVR F +
Sbjct: 319 GQLLVYEWQSESYILKQQGHFDSMN-TLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTF 377
Query: 146 RKFGYEVNEIAWNMTGEMFF 165
+ V ++ + G++ F
Sbjct: 378 TEHTSAVTQVQFAKRGQVLF 397
Score = 38 (18.4 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 8 FKNLHSREYT---GHKKKVHSVAWNCTGTKLASGSVDQTAR 45
F + S+ +T H+K V +A N T + S +D+ R
Sbjct: 40 FDLIKSQSFTFDYQHRKNVQCIALNNQNTLMIS--IDEDGR 78
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 145 (56.1 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 52/208 (25%), Positives = 96/208 (46%)
Query: 6 IPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQ-TARVWHIEPHGHGKVKDIELRG 64
I F+N + T + + + +A + +G + GS D VW ++ G++ D L G
Sbjct: 411 IRFRNFKTFTATS-RVQFNCLAVDPSGEVIVGGSQDTFEIYVWSVQT---GQLLD-SLTG 465
Query: 65 HADSVDQLCWDPKHADLIATASGDKTVRLWDARS-GKCSQQAELSGENINITYKPDGTHI 123
H + L + K ++A+AS DKT+R+W+ S + + E+ + + +T +PD +
Sbjct: 466 HEGPISCLTFG-KENSILASASWDKTIRIWNIFSRNQTVEPIEIQSDALCLTMRPDCKEL 524
Query: 124 AVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCY--CIAIDPM 181
AV D +TI D+ K +H ++ + + F N G Y IA
Sbjct: 525 AVSTLDGHVTIFDIEDAKQLHLIDGRKDI--VNGRYLEDKFIAKNSNRGKYFSTIAYSFD 582
Query: 182 G-RYFAVGSADSLVSLWDISEMLCVRTF 208
G A G+ +S + ++DI + ++ F
Sbjct: 583 GLTLLAAGNNNS-ICMYDIENEVLLKRF 609
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 53/240 (22%), Positives = 96/240 (40%)
Query: 10 NLHSREYTGH---KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-----VKDIE 61
N SR H K KV+ + ++ G A ++D+ +VW + V+
Sbjct: 83 NFVSRVVLHHFNFKSKVNDIKFSPCGKYFAI-AIDRFIQVWKTPDLTEDRQFAPFVRHRI 141
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---INITYKP 118
GH D V + W I+T S D T +++ S + SG IN +
Sbjct: 142 YSGHFDEVLNISWSLDSRFFIST-SKDMTAKIFSLNSDEKDVAMTFSGHRDYVINAFFSH 200
Query: 119 DGTHIAVGNRDDELTILD-VRKFKPIHRRKFGYEV---NEIAWNMTGEMFFLTTGNAGCY 174
D I ++D L + + KP + + ++W +T + FF G C
Sbjct: 201 DQEIIYTVSKDGALFKWEYTERPKPENEDSDSEDDATDKPMSWRITAKNFFYADGKLKCA 260
Query: 175 CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
C P + VG + L++I + +++ + + V T++ + TG+++A S L
Sbjct: 261 CF--HPQSKLLVVGFTNGEFRLYEIEDFNLIQSLSMGQNAVNTVNINKTGEWLAFGSAKL 318
Score = 108 (43.1 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 32/120 (26%), Positives = 58/120 (48%)
Query: 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLI 82
V++V N TG LA GS + ++ E + ++ +GH DS++ LC+ P + L+
Sbjct: 299 VNTVNINKTGEWLAFGSA-KLGQLLVYEWQSESYI--LKQQGHFDSMNTLCYSPDGSRLV 355
Query: 83 ATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFK 141
T S D +++WD RSG C E + + + G + + D + D+ +F+
Sbjct: 356 -TGSDDGKIKIWDVRSGFCLMTFTEHTSAVTQVQFAKRGQVLFSSSLDGTIRAWDLIRFR 414
Score = 103 (41.3 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 29/107 (27%), Positives = 47/107 (43%)
Query: 165 FLTTGNAGCYCIAIDPMGRYFAVGSADSL-VSLWDISEMLCVRTFTKLEWPVRTISFSHT 223
F T C+A+DP G GS D+ + +W + + + T E P+ ++F
Sbjct: 419 FTATSRVQFNCLAVDPSGEVIVGGSQDTFEIYVWSVQTGQLLDSLTGHEGPISCLTFGKE 478
Query: 224 GDYIASASEDLFIDISNVHT-GRTVHQIPCRAAMNSVEWNPKYNLLA 269
+ASAS D I I N+ + +TV I ++ + P LA
Sbjct: 479 NSILASASWDKTIRIWNIFSRNQTVEPIEIQSDALCLTMRPDCKELA 525
Score = 76 (31.8 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 87 GDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRK-FKPIHR 145
G V W + S QQ N + Y PDG+ + G+ D ++ I DVR F +
Sbjct: 319 GQLLVYEWQSESYILKQQGHFDSMN-TLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTF 377
Query: 146 RKFGYEVNEIAWNMTGEMFF 165
+ V ++ + G++ F
Sbjct: 378 TEHTSAVTQVQFAKRGQVLF 397
Score = 38 (18.4 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 8 FKNLHSREYT---GHKKKVHSVAWNCTGTKLASGSVDQTAR 45
F + S+ +T H+K V +A N T + S +D+ R
Sbjct: 40 FDLIKSQSFTFDYQHRKNVQCIALNNQNTLMIS--IDEDGR 78
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 156 (60.0 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 72/290 (24%), Positives = 113/290 (38%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK 77
GH++ V VAW+ G LAS S D T +W V +E GH + V + W P
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLE--GHENEVKSVAWAPS 116
Query: 78 HADLIATASGDKTVRLWDARSG---KCSQQAELSGENI-NITYKPDGTHIAVGNRDDELT 133
+L+AT S DK+V +W+ +C +++ ++ + P +A + DD +
Sbjct: 117 -GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVK 175
Query: 134 ILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGN--AGCYCIAIDPMGRYFAVGSA 190
+ + + G+E W++ F +G A C + R + G+
Sbjct: 176 LYREEEDDWVCCATLEGHE--STVWSLA----FDPSGQRLASCSDDRTVRIWRQYLPGNE 229
Query: 191 DSLVSLWDISEMLCV--------RTFTKLEWP--VRTISFSHTGDYIASASEDLFIDISN 240
+ + CV RT + W T++ + D I ED D
Sbjct: 230 QGVACSGSEASWKCVCTLSGFHSRTIYDVAWCQLTGTLATACGDDAIRVFEEDPGSDPQQ 289
Query: 241 VHTGRTVHQIPCRAA-MNSVEWNPKYN-LLAYAGDDKN----KYQADEGV 284
T H + +N V WNPK LLA DD KYQ EG+
Sbjct: 290 PTFSLTAHVPQAHSQDVNCVAWNPKERGLLASCSDDGELAFWKYQPSEGI 339
Score = 134 (52.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 55/219 (25%), Positives = 94/219 (42%)
Query: 26 VAWNCTGTKLASGSVDQTARVWHIEPHGHGKV-KDIELRGHADSVDQLCWDPKHADLIAT 84
+AWN GT LAS D++ R+W E G + K + GH +V ++ W P + +A+
Sbjct: 22 LAWNPAGTLLASCGGDRSVRIWGRE--GDSWICKSVLCEGHQRTVRKVAWSPC-GNYLAS 78
Query: 85 ASGDKTVRLWDARSGKCSQQAELSG-ENI--NITYKPDGTHIAVGNRDDELTILDVRKFK 141
AS D T +W L G EN ++ + P G +A +RD + + +V +
Sbjct: 79 ASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE-- 136
Query: 142 PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLW--DI 199
+ YE + + T ++ + P A S D V L+ +
Sbjct: 137 -----EDEYECVSVLNSHTQDVKH----------VVWHPSQELLASASYDDTVKLYREEE 181
Query: 200 SEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 238
+ +C T E V +++F +G +AS S+D + I
Sbjct: 182 DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRI 220
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 150 (57.9 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 65/240 (27%), Positives = 107/240 (44%)
Query: 15 EYT--GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL 72
E+T GHK ++ VAW+ G AS D+ R+W + + K I GH ++ ++
Sbjct: 7 EHTLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTW-TTKTILSDGHKRTIREV 65
Query: 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG-ENI--NITYKPDGTHIAVGNRD 129
W P + +A+AS D T +W +C+ A L G EN ++++ G +A +RD
Sbjct: 66 RWSPC-GEYLASASFDATTAIWSKH--ECT--ATLEGHENEVKSVSWSRSGGLLATCSRD 120
Query: 130 DELTILDVR---KFK-PIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYF 185
+ I +V +F+ +V + W+ T E+ L + + Y D + F
Sbjct: 121 KSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKEV--LASAS---Y----DNTIKMF 171
Query: 186 AVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNV-HTG 244
A + DS WD + L T T W +I F G+ + S S+D + I H G
Sbjct: 172 AESALDSD---WDCTATLSSHTSTV--W---SIDFDADGERLVSCSDDATLKIWRAYHPG 223
Score = 41 (19.5 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 256 MNSVEWNP 263
+N+VEWNP
Sbjct: 302 VNAVEWNP 309
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 125 (49.1 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 40/128 (31%), Positives = 62/128 (48%)
Query: 157 WNM-TGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ TG+ + G+ G C +A+ P + F G+ D+ LWD+ E C +TFT E
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESD 228
Query: 215 VRTISFSHTGDYIASASED----LF-IDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLA 269
+ I F G+ I + S+D LF + T + I C + SV ++ LL
Sbjct: 229 INAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSQESIIC--GITSVAFSLSGRLL- 285
Query: 270 YAG-DDKN 276
+AG DD N
Sbjct: 286 FAGYDDFN 293
Score = 71 (30.1 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENINITYKPDG 120
LRGH + + W + L+ +AS D + +WD + L S + Y P G
Sbjct: 51 LRGHLAKIYAMHW-ATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 121 THIAVGNRDDELTILDVR 138
+A G D+ +I +++
Sbjct: 110 NFVACGGLDNMCSIYNLK 127
Score = 65 (27.9 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 29/128 (22%), Positives = 47/128 (36%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH K++++ W L S S D VW + + KV I LR S C
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVW--DTYTTNKVHAIPLRS---SWVMTC 103
Query: 74 WDPKHADLIATASGDKTVRLWD--ARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD 129
+ +A D +++ +R G ELS ++ D +I + D
Sbjct: 104 AYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGD 163
Query: 130 DELTILDV 137
+ D+
Sbjct: 164 TTCALWDI 171
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 135 (52.6 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 44/146 (30%), Positives = 69/146 (47%)
Query: 9 KNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADS 68
KNL H V+ ++ G ++AS D+T +V+ E G+ K ++++ H D
Sbjct: 604 KNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAET---GE-KLLDIKAHEDE 659
Query: 69 VDQLCWDPKHAD-LIATASGDKTVRLWDARSGKCSQQAELSGENIN---ITYKPDGTHIA 124
V LC D IAT S DK V++WD+ +GK E E +N T K + +A
Sbjct: 660 V--LCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLA 717
Query: 125 VGNRDDELTILDVRKFKPIHRRKFGY 150
G+ D L + D+ + K FG+
Sbjct: 718 TGSNDSFLKLWDLNQ-KECRNTMFGH 742
Score = 94 (38.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 32/117 (27%), Positives = 57/117 (48%)
Query: 16 YTGHKKKVHSVAWNCTGTK---LASGSVDQ-TARVWHIEPHGHGKVKDIELRGHADSVDQ 71
+TGH HS C + LA ++ Q +W+I+ +VK + RGH V
Sbjct: 836 HTGH----HSTIQYCDFSPYDHLAVIALSQYCVELWNID----SRVKVADCRGHLSWVHG 887
Query: 72 LCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHI-AVGN 127
+ + P + + TAS D+T+R+W+ R C A + + I++ ++ + + AV N
Sbjct: 888 VMFSPDGSSFL-TASDDQTIRVWETRK-VCKNSAIVLKQEIDVVFQENEMMVLAVDN 942
Score = 75 (31.5 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 21/84 (25%), Positives = 37/84 (44%)
Query: 160 TGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTIS 219
TG++ +L C C++ P Y A G + + + ++ + + VR I
Sbjct: 953 TGQIDYLPEAQVSCCCLS--PHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQ 1010
Query: 220 FSHTGDYIASASEDLFIDISNVHT 243
F+ G + S+SED I + N T
Sbjct: 1011 FTADGKTLISSSEDSVIQVWNWQT 1034
Score = 63 (27.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 28/118 (23%), Positives = 46/118 (38%)
Query: 133 TILDVRKFKPIHRRKFGYEVNEIAWNM-TGEMFFLTTGNAGCYC-IAIDPMGRYFAVGSA 190
T+ D R + + ++ WN+ TG + T + G AI F+ SA
Sbjct: 1046 TVKDFRLLRDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSA 1105
Query: 191 DSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVH 248
D +W + VR +FS G +A+ ++ I I NV G+ +H
Sbjct: 1106 DKTAKIWSFELPSPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLH 1163
Score = 43 (20.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 14/62 (22%), Positives = 25/62 (40%)
Query: 189 SADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVH 248
S D V +W++ R FT + V + + S +S S D I + +H
Sbjct: 1062 SFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELPSPLH 1121
Query: 249 QI 250
++
Sbjct: 1122 EL 1123
Score = 40 (19.1 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 17/100 (17%), Positives = 41/100 (41%)
Query: 176 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLF 235
+ P G F S D + +W+ + +C + L+ + + F + +
Sbjct: 888 VMFSPDGSSFLTASDDQTIRVWE-TRKVCKNSAIVLKQEIDVV-FQENEMMVLAVDNIRG 945
Query: 236 IDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDK 275
+ + TG+ + +P A ++ +P +A+ GD++
Sbjct: 946 LQLIAGKTGQ-IDYLP-EAQVSCCCLSPHLEYVAF-GDEE 982
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 133 (51.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 32/122 (26%), Positives = 59/122 (48%)
Query: 157 WNMTGEMFFLTT-GNAGCYC-IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ T G+ C + P G + A GS D+ + LWD+ C+ +
Sbjct: 90 WDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQA 149
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAA-MNSVEWNPKYNLLAYAGD 273
VR + FS G ++ASA++D + + ++ G+ + + + +N VE++P LLA
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSS 209
Query: 274 DK 275
D+
Sbjct: 210 DR 211
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/130 (28%), Positives = 65/130 (50%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GHK + S+ ++ G+ +ASGS+D ++W + G + + H +V L
Sbjct: 99 RTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGC----IFKYKSHTQAVRCLR 154
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN--INIT-YKPDGTHIAVGNRDD 130
+ P +A+A+ D TV+LWD +GK E +G + +N+ + P +A G+ D
Sbjct: 155 FSPD-GKWLASAADDHTVKLWDLTAGKV--MFEFTGHSGPVNVVEFHPSEYLLASGSSDR 211
Query: 131 ELTILDVRKF 140
+ D+ KF
Sbjct: 212 TIRFWDLEKF 221
Score = 119 (46.9 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 38/131 (29%), Positives = 60/131 (45%)
Query: 14 REYTGHKKKVHS-VAWNCTGTKLASGSVDQTARVWHI-EPHGHGKVKDIELRGHADSVDQ 71
+E H V S V TG LA+G D VW + +P+ + L GH ++
Sbjct: 14 QEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCV-----MSLTGHTTPIES 68
Query: 72 LCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT---YKPDGTHIAVGNR 128
L K +LI S ++R+WD + K + L G NI + P G+ +A G+
Sbjct: 69 LQISAKE-ELIVAGSQSGSIRVWDLEAAKILRT--LLGHKANICSLDFHPYGSFVASGSL 125
Query: 129 DDELTILDVRK 139
D ++ + DVR+
Sbjct: 126 DTDIKLWDVRR 136
Score = 107 (42.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
TGH + S+ + + +GS + RVW +E K+ L GH ++ L + P
Sbjct: 60 TGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEA---AKILRT-LLGHKANICSLDFHP 115
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHIAVGNRDDELTIL 135
+ +A+ S D ++LWD R C + + + + + + PDG +A D + +
Sbjct: 116 -YGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 136 DV 137
D+
Sbjct: 175 DL 176
Score = 86 (35.3 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 157 WNMT-GEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++T G++ F TG++G + P A GS+D + WD+ + V + P
Sbjct: 174 WDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATP 233
Query: 215 VRTISFSHTGDYIASASED 233
VR I F+ G + +D
Sbjct: 234 VRCILFNPDGCCLYGGFQD 252
Score = 67 (28.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 24/98 (24%), Positives = 41/98 (41%)
Query: 61 ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG-----ENINIT 115
E+ H+ +V L L+AT D V +W C L+G E++ I+
Sbjct: 15 EIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMS--LTGHTTPIESLQIS 72
Query: 116 YKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVN 153
K + I G++ + + D+ K I R G++ N
Sbjct: 73 AKEE--LIVAGSQSGSIRVWDLEAAK-ILRTLLGHKAN 107
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 134 (52.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 40/163 (24%), Positives = 75/163 (46%)
Query: 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
EY GH ++ + TK AS D+ +VW + GKV D L GH ++ + +
Sbjct: 51 EYAGHGHEILDLDLVYDSTKFASCGGDKFIQVWDVNT---GKV-DRRLGGHLAQINTIRY 106
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAV-GNRDDELT 133
+ + + ++A+ S D VRLWD RS S L+ +++ H+ V G+ D L
Sbjct: 107 N-EDSSILASGSFDSKVRLWDCRSNSFSPIQVLADAKDSVSSIDIAEHLIVTGSTDGTLR 165
Query: 134 ILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCI 176
D+RK + F + + + + + +++ N+ + +
Sbjct: 166 TYDIRK-GTLSSDYFSHPITSVKTSKSASFSLISSLNSSIHLL 207
Score = 115 (45.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 36/130 (27%), Positives = 67/130 (51%)
Query: 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVD-QLCWDPKH 78
K+ ++ V +N TG + + ++ R+W+++ G + + GH + +D L +D
Sbjct: 14 KEPINVVKYNRTGKYVLAAGNERVVRLWNVKS-G-ACIHEYAGHGH-EILDLDLVYD--- 67
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGE--NIN-ITYKPDGTHIAVGNRDDELTIL 135
+ A+ GDK +++WD +GK ++ L G IN I Y D + +A G+ D ++ +
Sbjct: 68 STKFASCGGDKFIQVWDVNTGKVDRR--LGGHLAQINTIRYNEDSSILASGSFDSKVRLW 125
Query: 136 DVRK--FKPI 143
D R F PI
Sbjct: 126 DCRSNSFSPI 135
Score = 99 (39.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH +++++ +N + LASGS D R+W + ++ L DSV +
Sbjct: 92 RRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNSFSPIQ--VLADAKDSVSSI- 148
Query: 74 WD-PKHADLIATASGDKTVRLWDARSGKCS 102
D +H LI T S D T+R +D R G S
Sbjct: 149 -DIAEH--LIVTGSTDGTLRTYDIRKGTLS 175
Score = 57 (25.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 188 GSADSLVSLWDISEMLCVRTFTKLEWPVRT-ISFSHTGD--YIASASEDLFI 236
GS D V LWD+ + + + + P+ T IS T D IA+ DLFI
Sbjct: 242 GSEDGKVYLWDLENETQITSTSVVGTPIVTDISCHPTMDDFIIATVHGDLFI 293
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 125 (49.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 157 WNM-TGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ TG+ + G+ G C +A+ P + F G+ D+ LWD+ E C +TFT E
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESD 228
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTV----HQ-IPCRAAMNSVEWNPKYNLLA 269
+ I F G+ I + S+D + ++ + + H+ I C + SV ++ LL
Sbjct: 229 INAICFFPNGEAICTGSDDASCRLFDLRADQELTTYSHESIIC--GITSVAFSLSGRLL- 285
Query: 270 YAG-DDKN 276
+AG DD N
Sbjct: 286 FAGYDDFN 293
Score = 100 (40.3 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 41/156 (26%), Positives = 68/156 (43%)
Query: 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK-DIELRGHADSVDQLCWDPKHADL 81
V + A+ +G +A G +D ++ ++ G VK EL H + C +
Sbjct: 100 VMTCAYAPSGNFVACGGLDNMCSIYSLKSR-EGNVKVSRELSAHTGYLS--CCRFLDDNN 156
Query: 82 IATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDELTILDVRKF 140
I T+SGD T LWD +G+ +G+ +++ PD G D + DVR+
Sbjct: 157 IVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVRE- 215
Query: 141 KPIHRRKF-GYE--VNEIAWNMTGEMFFLTTGNAGC 173
R+ F G+E +N I + GE + +A C
Sbjct: 216 -GTCRQTFTGHESDINAICFFPNGEAICTGSDDASC 250
Score = 70 (29.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENINITYKPDG 120
LRGH + + W + L+ +AS D + +WD + L S + Y P G
Sbjct: 51 LRGHLAKIYAMHW-ATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 121 THIAVGNRDDELTILDVR 138
+A G D+ +I ++
Sbjct: 110 NFVACGGLDNMCSIYSLK 127
Score = 64 (27.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 29/128 (22%), Positives = 46/128 (35%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH K++++ W L S S D VW + + KV I LR S C
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVW--DTYTTNKVHAIPLRS---SWVMTC 103
Query: 74 WDPKHADLIATASGDKTVRLWD--ARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD 129
+ +A D ++ +R G ELS ++ D +I + D
Sbjct: 104 AYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGD 163
Query: 130 DELTILDV 137
+ D+
Sbjct: 164 TTCALWDI 171
Score = 53 (23.7 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 172 GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASAS 231
G +A GR G D ++WD + V T + + V + + G +A+ S
Sbjct: 272 GITSVAFSLSGRLLFAGYDDFNCNVWDSMKCERVGTLSGHDNRVSCLGVTADGMAVATGS 331
Query: 232 EDLFIDISN 240
D F+ I N
Sbjct: 332 WDSFLKIWN 340
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 125 (49.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 157 WNM-TGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ TG+ + G+ G C +A+ P + F G+ D+ LWD+ E C +TFT E
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESD 228
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTV----HQ-IPCRAAMNSVEWNPKYNLLA 269
+ I F G+ I + S+D + ++ + + H+ I C + SV ++ LL
Sbjct: 229 INAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSHESIIC--GITSVAFSLSGRLL- 285
Query: 270 YAG-DDKN 276
+AG DD N
Sbjct: 286 FAGYDDFN 293
Score = 70 (29.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENINITYKPDG 120
LRGH + + W + L+ +AS D + +WD + L S + Y P G
Sbjct: 51 LRGHLAKIYAMHW-ATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 121 THIAVGNRDDELTILDVR 138
+A G D+ +I ++
Sbjct: 110 NFVACGGLDNMCSIYSLK 127
Score = 64 (27.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 29/128 (22%), Positives = 46/128 (35%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH K++++ W L S S D VW + + KV I LR S C
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVW--DTYTTNKVHAIPLRS---SWVMTC 103
Query: 74 WDPKHADLIATASGDKTVRLWD--ARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD 129
+ +A D ++ +R G ELS ++ D +I + D
Sbjct: 104 AYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGD 163
Query: 130 DELTILDV 137
+ D+
Sbjct: 164 TTCALWDI 171
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 154 (59.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 38/124 (30%), Positives = 62/124 (50%)
Query: 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP 76
+GH+ +V W+ LA+ D+T R+W + G K + GH ++ + W P
Sbjct: 11 SGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIRDVAWSP 70
Query: 77 KHADLIATASGDKTVRLWDARSGKCSQQAELSG-ENI--NITYKPDGTHIAVGNRDDELT 133
+A+AS D TV +WD RSG+ A L G EN ++++ G +A +RD +
Sbjct: 71 C-GRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRDKSVW 129
Query: 134 ILDV 137
I +V
Sbjct: 130 IWEV 133
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 69/292 (23%), Positives = 115/292 (39%)
Query: 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK-DIELRGHADSVDQLCWDP 76
GH + + VAW+ G LAS S D T +W G+ + + L GH + V + W
Sbjct: 58 GHTRTIRDVAWSPCGRFLASASFDATVAIWD---RRSGEFECNATLEGHENEVKSVSWS- 113
Query: 77 KHADLIATASGDKTVRLWDARSG---KCSQQAELSGENIN-ITYKPDGTHIAVGNRD--- 129
K L+AT S DK+V +W+ +C+ +++ + + P+ +A + D
Sbjct: 114 KSGALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNEDVLASASYDNTI 173
Query: 130 ----DELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYF 185
++L D F + V IA++ +G + + G F
Sbjct: 174 QLYREDLADSDWSSFDTL--ASHDSTVWSIAFDASGSRLASCSDDQTVRIWQEYKPGNEF 231
Query: 186 AVGSADSLVSLWDISEMLCVRTFTKLEW-PVRTISFSHTGDYIASASED----LFIDISN 240
V D +W CV T + V IS+ IA+A D +F +++
Sbjct: 232 GVACPDGKTPVWK-----CVCTLSGFHSRAVYDISWCKKTGLIATACGDDMVRIFREVAG 286
Query: 241 VHTGR-TVHQIPCRAA----MNSVEWNPKY-NLLAYAGDDKN----KYQADE 282
T + + A N+VEW+P LL DD + K++ DE
Sbjct: 287 SPANEPTFEMVASKHAHSQDANTVEWSPTVAGLLVTTSDDGDVKLWKFEDDE 338
>UNIPROTKB|F1NLV4 [details] [associations]
symbol:GNB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001750 "photoreceptor outer segment" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0005834 GeneTree:ENSGT00550000074331
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:AADN02040871
IPI:IPI00596111 Ensembl:ENSGALT00000002040
Ensembl:ENSGALT00000040376 Uniprot:F1NLV4
Length = 403
Score = 120 (47.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 157 WNM-TGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ TG+ TG+ G +++ P R F G+ D+ LWD+ E +C +TFT E
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDARCFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTV----HQ-IPCRAAMNSVEWNPKYNLLA 269
+ I F G+ A+ S+D + ++ + + H I C + SV ++ LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIIC--GITSVAFSKSGRLLL 286
Query: 270 YAGDDKN 276
DD N
Sbjct: 287 AGYDDFN 293
Score = 114 (45.2 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 41/156 (26%), Positives = 73/156 (46%)
Query: 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK-DIELRGHADSVDQLCWDPKHADL 81
V + A+ +G +A G +D +++++ G V+ EL GH + C +
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTR-EGNVRVSRELAGHTGYLS--CCRFLDDNQ 156
Query: 82 IATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDELTILDVRKF 140
I T+SGD T LWD +G+ + +G+ ++++ PD G D + DVR+
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDARCFVSGACDASAKLWDVRE- 215
Query: 141 KPIHRRKF-GYE--VNEIAWNMTGEMFFLTTGNAGC 173
+ R+ F G+E +N I + G F + +A C
Sbjct: 216 -GMCRQTFTGHESDINAICFFPNGNAFATGSDDATC 250
Score = 78 (32.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 48 HIEPHGHGKVKDIE-LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAE 106
+I+P G +++ LRGH + + W + L+ +AS D + +WD+ +
Sbjct: 36 NIDPVGRIQMRTRRTLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIP 94
Query: 107 L-SGENINITYKPDGTHIAVGNRDDELTILDVR 138
L S + Y P G ++A G D+ +I +++
Sbjct: 95 LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127
Score = 65 (27.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 28/128 (21%), Positives = 46/128 (35%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH K++++ W L S S D +W + + KV I LR S C
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIW--DSYTTNKVHAIPLRS---SWVMTC 103
Query: 74 WDPKHADLIATASGDKTVRLWD--ARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD 129
+ +A D +++ R G EL+G ++ D I + D
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGD 163
Query: 130 DELTILDV 137
+ D+
Sbjct: 164 TTCALWDI 171
Score = 37 (18.1 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 172 GCYCIAIDPMGRYFAVGSADSLVSLWD 198
G +A GR G D ++WD
Sbjct: 272 GITSVAFSKSGRLLLAGYDDFNCNVWD 298
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 123 (48.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 38/128 (29%), Positives = 63/128 (49%)
Query: 157 WNM-TGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ TG+ + G+ G C +A+ P F G+ D+ LWD+ E C +TFT E
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESD 228
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTV----HQ-IPCRAAMNSVEWNPKYNLLA 269
+ I F G+ I + S+D + ++ + + H+ I C + SV ++ LL
Sbjct: 229 INAICFFPNGEAICTGSDDASCRLFDLRADQELICFSHESIIC--GITSVAFSLSGRLL- 285
Query: 270 YAG-DDKN 276
+AG DD N
Sbjct: 286 FAGYDDFN 293
Score = 103 (41.3 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 41/156 (26%), Positives = 69/156 (44%)
Query: 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK-DIELRGHADSVDQLCWDPKHADL 81
V + A+ +G +A G +D +++++ G VK EL H + C +
Sbjct: 100 VMTCAYAPSGNFVACGGLDNMCSIYNLKSR-EGNVKVSRELSAHTGYLS--CCRFLDDNN 156
Query: 82 IATASGDKTVRLWDARSGKCSQQ-AELSGENINITYKPDGTHIAVGNRDDELTILDVRKF 140
I T+SGD T LWD +G+ +G+ +++ PD G D + DVR+
Sbjct: 157 IVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVRE- 215
Query: 141 KPIHRRKF-GYE--VNEIAWNMTGEMFFLTTGNAGC 173
R+ F G+E +N I + GE + +A C
Sbjct: 216 -GTCRQTFTGHESDINAICFFPNGEAICTGSDDASC 250
Score = 72 (30.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENINITYKPDG 120
LRGH + + W + L+ +AS D + +WD+ + L S + Y P G
Sbjct: 51 LRGHLAKIYAMHW-ATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 121 THIAVGNRDDELTILDVR 138
+A G D+ +I +++
Sbjct: 110 NFVACGGLDNMCSIYNLK 127
Score = 65 (27.9 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 29/128 (22%), Positives = 47/128 (36%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH K++++ W L S S D VW + + KV I LR S C
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVW--DSYTTNKVHAIPLRS---SWVMTC 103
Query: 74 WDPKHADLIATASGDKTVRLWD--ARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD 129
+ +A D +++ +R G ELS ++ D +I + D
Sbjct: 104 AYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGD 163
Query: 130 DELTILDV 137
+ D+
Sbjct: 164 TTCALWDI 171
Score = 47 (21.6 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 17/69 (24%), Positives = 28/69 (40%)
Query: 172 GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASAS 231
G +A GR G D ++WD + V + + V + + G +A+ S
Sbjct: 272 GITSVAFSLSGRLLFAGYDDFNCNVWDSMKSERVGILSGHDNRVSCLGVTADGMAVATGS 331
Query: 232 EDLFIDISN 240
D F+ I N
Sbjct: 332 WDSFLKIWN 340
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/241 (24%), Positives = 108/241 (44%)
Query: 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLI 82
+ SV ++ G LA+G+ D+ RVW I ++ I+ GH + L + + I
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDITTR---TIR-IQFAGHEQDIYSLDF-ARDGRTI 403
Query: 83 ATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP 142
A+ SGD+TVRLWD +G + + PD ++A G+ D + + D+ + P
Sbjct: 404 ASGSGDRTVRLWDIENGTALTVFTIEDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCP 463
Query: 143 IHRRKF--GYE--VNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWD 198
+ R + G++ V +A++ G L TG+ +D + + + + +
Sbjct: 464 VERLEGPDGHKDSVYSVAFSPNGRD--LVTGS-------LDKTIKLWELATPRGNMQNQG 514
Query: 199 ISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNS 258
CV+TF V +++ + ++ S S+D + + TG T Q+ + NS
Sbjct: 515 SKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGST--QLMLQGHKNS 572
Query: 259 V 259
V
Sbjct: 573 V 573
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 54/226 (23%), Positives = 98/226 (43%)
Query: 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74
++ GH++ ++S+ + G +ASGS D+T R+W IE V IE D V +
Sbjct: 383 QFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIE-----DGVTTVAI 437
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN------INITYKPDGTHIAVGNR 128
P +A S DK+VR+WD G C + L G + ++ + P+G + G+
Sbjct: 438 SPD-TKYVAAGSLDKSVRVWDLTQG-CPVE-RLEGPDGHKDSVYSVAFSPNGRDLVTGSL 494
Query: 129 DDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVG 188
D + + ++ + + + G + G F+ + +A+ P ++ G
Sbjct: 495 DKTIKLWELATPRG-NMQNQGSKGGRCVKTFEGHRDFVLS-------VALTPDNQWVMSG 546
Query: 189 SADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL 234
S D V WD + V +++ S TG + A+ S D+
Sbjct: 547 SKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDM 592
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 49/177 (27%), Positives = 81/177 (45%)
Query: 33 TK-LASGSVDQTARVWHIEPHGHGKVKDIE-LRGHADSVDQLCWDPKHADLIATASGDKT 90
TK +A+GS+D++ RVW + G V+ +E GH DSV + + P DL+ T S DKT
Sbjct: 441 TKYVAAGSLDKSVRVWDLT-QGC-PVERLEGPDGHKDSVYSVAFSPNGRDLV-TGSLDKT 497
Query: 91 VRLWDARS--GKCSQQAELSGENINITYKPDGTHI-AVGNRDDELTILDVRKFKPIHRRK 147
++LW+ + G Q G + T++ + +V D ++ K + + +
Sbjct: 498 IKLWELATPRGNMQNQGSKGGRCVK-TFEGHRDFVLSVALTPDNQWVMSGSKDRGV---Q 553
Query: 148 FGYEVNEIAWN-MTGEMFFLTTGNAGCYC-IAIDPMGRYFAVGSADSLVSLWDISEM 202
F W+ TG + G+ +A P G +FA GS D +W + M
Sbjct: 554 F--------WDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIWSYTRM 602
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 127 (49.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 39/140 (27%), Positives = 73/140 (52%)
Query: 6 IPFKNLHSREYTGHKKKVHS-VAWNCTGTKLASGSVDQ-TARVWHIEPHGHGKVKDIELR 63
I ++N R +T + S +A + +G + +GS D +W ++ G++ + L
Sbjct: 411 IRYRNF--RTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQT---GQLLET-LA 464
Query: 64 GHADSVDQLCWDPKHADLIATASGDKTVRLWD--ARSGKCSQQAELSGENINITYKPDGT 121
GH V L ++ L+A+ S DKTVR+WD +RSG + + + +++ + PDG
Sbjct: 465 GHEGPVSSLSFNSS-GSLLASGSWDKTVRIWDIFSRSG-IVEPLPIPSDVLSLAFHPDGK 522
Query: 122 HIAVGNRDDELTILDVRKFK 141
+ V + D +LT +V++ K
Sbjct: 523 EVCVASLDGQLTFWNVQEGK 542
Score = 115 (45.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 175 CIAIDPMGRYFAVGSADSL-VSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED 233
CIA+DP G GS DS + +W + + T E PV ++SF+ +G +AS S D
Sbjct: 429 CIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSWD 488
Query: 234 LFIDISNVHT-GRTVHQIPCRAAMNSVEWNP 263
+ I ++ + V +P + + S+ ++P
Sbjct: 489 KTVRIWDIFSRSGIVEPLPIPSDVLSLAFHP 519
Score = 92 (37.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 30/88 (34%), Positives = 42/88 (47%)
Query: 7 PFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHA 66
PF LH REYTGH + S++W+ S S D TAR+ ++P G L GH
Sbjct: 135 PFV-LH-REYTGHFDDIVSISWSADSRFFISTSKDLTARLHSVDPI-EG-FHPCALTGHK 190
Query: 67 DSVDQLCWDPKHADLIATASGDKTVRLW 94
++V + K I T S D + +W
Sbjct: 191 NTVVSGFFS-KDQQTIYTVSKDGALFVW 217
Score = 84 (34.6 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 182 GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFI---DI 238
G+ G+ D + +WD++ C+ TFT+ V + FS G+ + S+S D + D+
Sbjct: 351 GQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDL 410
Query: 239 SNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDD 274
RT P R + + +P ++ D
Sbjct: 411 IRYRNFRTF-TAPSRVQFSCIAVDPSGEIVCAGSQD 445
Score = 73 (30.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 25/99 (25%), Positives = 42/99 (42%)
Query: 157 WNM-TGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ TG++ G+ G ++ + G A GS D V +WDI + +
Sbjct: 452 WSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPSD 511
Query: 215 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCR 253
V +++F G + AS D + NV G+ I R
Sbjct: 512 VLSLAFHPDGKEVCVASLDGQLTFWNVQEGKQTSLIDGR 550
Score = 64 (27.6 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 25/103 (24%), Positives = 45/103 (43%)
Query: 2 GESSIP-FKNLHSREYTGHKKKVHSVAWNCTGTKLASGS--VDQTARVWHIEPHGHGKVK 58
G +P F L+ T + + ++ N TG +A GS + Q VW + +
Sbjct: 279 GIYELPSFTMLYQLSIT--QSNIDTLTVNSTGDWIAIGSSKLGQLL-VWEWQSESYV--- 332
Query: 59 DIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKC 101
++ + H D++ L + I T + D +++WD SG C
Sbjct: 333 -LKQQSHYDALSTLQYS-SDGQRIITGADDGKIKVWDMNSGFC 373
Score = 49 (22.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 17/56 (30%), Positives = 23/56 (41%)
Query: 7 PFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEP-HGHGKVKDIE 61
P + H TGHK V S ++ + + S D VW P G+V D E
Sbjct: 177 PIEGFHPCALTGHKNTVVSGFFSKDQQTIYTVSKDGALFVWKYSPLFQAGEVIDEE 232
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 153 (58.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 44/161 (27%), Positives = 79/161 (49%)
Query: 3 ESSIPFKNLHSREYTGHKKKVHSVAWNCTGT-KLASGSVDQTARVWHIEPHGHGKVKDIE 61
++++P + R + H ++V SV +N T + S D T ++W ++ +
Sbjct: 89 DTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRT---- 144
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS-GKCSQQAELSGENINITY-KPD 119
+ HA V Q W+PKH D+ A+ASGD T+R+WD R G E ++ + K D
Sbjct: 145 FKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYD 204
Query: 120 GTHIAVGNRDDELTILDVRKFK-PIH-RRKFGYEVNEIAWN 158
+A + D + + DVR ++ P+ GY V ++ ++
Sbjct: 205 DCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFS 245
>UNIPROTKB|O94967 [details] [associations]
symbol:WDR47 "WD repeat-containing protein 47" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CH471122 eggNOG:COG2319
EMBL:AL449266 GO:GO:0005874 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX679664 EMBL:AB020700 EMBL:AK289789
EMBL:BC034964 EMBL:BC039254 IPI:IPI00217629 IPI:IPI00479795
IPI:IPI00645640 RefSeq:NP_001136023.1 RefSeq:NP_055784.3
UniGene:Hs.570055 ProteinModelPortal:O94967 SMR:O94967
IntAct:O94967 MINT:MINT-1381291 STRING:O94967 PhosphoSite:O94967
PaxDb:O94967 PRIDE:O94967 DNASU:22911 Ensembl:ENST00000357672
Ensembl:ENST00000361054 Ensembl:ENST00000369962
Ensembl:ENST00000369965 GeneID:22911 KEGG:hsa:22911 UCSC:uc001dwi.3
UCSC:uc001dwj.3 UCSC:uc001dwk.2 CTD:22911 GeneCards:GC01M109512
HGNC:HGNC:29141 HPA:HPA027287 HPA:HPA027289 neXtProt:NX_O94967
PharmGKB:PA134937302 HOGENOM:HOG000231412 HOVERGEN:HBG058798
ChiTaRS:WDR47 GenomeRNAi:22911 NextBio:43585 ArrayExpress:O94967
Bgee:O94967 CleanEx:HS_WDR47 Genevestigator:O94967
GermOnline:ENSG00000085433 Uniprot:O94967
Length = 919
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 68/240 (28%), Positives = 107/240 (44%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHG-HGKVKDIELRGHADSVDQLCW--D 75
HK ++ VAW+ G LA+GS D+ +V + D+E H ++ L +
Sbjct: 660 HKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEG 719
Query: 76 PKH--ADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT--YKPDGTHIAVGNRDDE 131
P+ A LI+ +GD + D + G+ A LSG +I Y G IA G++D
Sbjct: 720 PESGGAILISAGAGDCNIYTTDCQRGQ-GLHA-LSGHTGHILALYTWSGWMIASGSQDKT 777
Query: 132 LTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSAD 191
+ D+R P R G F TG+A +A+DP GR A G D
Sbjct: 778 VRFWDLRV--PSCVRVVGTT-------------FHGTGSAVA-SVAVDPSGRLLATGQED 821
Query: 192 SLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP 251
S L+DI V+++ VR++ FS Y+ + S D+ I ++++ G Q+P
Sbjct: 822 SSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQ-GDLTKQLP 880
>MGI|MGI:2139593 [details] [associations]
symbol:Wdr47 "WD repeat domain 47" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:2139593 GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0005874 EMBL:AL683823 EMBL:CH466607 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00550000074331
CTD:22911 HOGENOM:HOG000231412 HOVERGEN:HBG058798 EMBL:AK122397
EMBL:BC040337 IPI:IPI00330193 RefSeq:NP_852065.2 UniGene:Mm.285968
ProteinModelPortal:Q8CGF6 SMR:Q8CGF6 DIP:DIP-58945N
PhosphoSite:Q8CGF6 PaxDb:Q8CGF6 PRIDE:Q8CGF6
Ensembl:ENSMUST00000051145 GeneID:99512 KEGG:mmu:99512
InParanoid:A2AGC7 OMA:RVCAYPD OrthoDB:EOG4640B8 NextBio:353995
Bgee:Q8CGF6 CleanEx:MM_WDR47 Genevestigator:Q8CGF6
GermOnline:ENSMUSG00000040389 Uniprot:Q8CGF6
Length = 920
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 68/240 (28%), Positives = 107/240 (44%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHG-HGKVKDIELRGHADSVDQLCW--D 75
HK ++ VAW+ G LA+GS D+ +V + D+E H ++ L +
Sbjct: 661 HKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEG 720
Query: 76 PKH--ADLIATASGDKTVRLWDARSGKCSQQAELSGENINIT--YKPDGTHIAVGNRDDE 131
P+ A LI+ +GD + D + G+ A LSG +I Y G IA G++D
Sbjct: 721 PESGGAILISAGAGDCNIYTTDCQRGQ-GLHA-LSGHTGHILALYTWSGWMIASGSQDKT 778
Query: 132 LTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSAD 191
+ D+R P R G F TG+A +A+DP GR A G D
Sbjct: 779 VRFWDLRV--PSCVRVVGTT-------------FHGTGSAVA-SVAVDPSGRLLATGQED 822
Query: 192 SLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP 251
S L+DI V+++ VR++ FS Y+ + S D+ I ++++ G Q+P
Sbjct: 823 SSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQ-GDLTKQLP 881
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 155 (59.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 42/163 (25%), Positives = 76/163 (46%)
Query: 18 GHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHG-HGKVKDIE--LRGHADSVDQLC 73
GH+K+ + ++WN L S S D T +W I GK+ D + GH+ V+ +
Sbjct: 165 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 224
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---IN-ITYKPDGTHI-AVGNR 128
W H L + + D+ + +WD RS S+ + L + +N +++ P I A G+
Sbjct: 225 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 284
Query: 129 DDELTILDVRKFK-PIHR-RKFGYEVNEIAWNMTGEMFFLTTG 169
D + + D+R K +H E+ ++ W+ E ++G
Sbjct: 285 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSG 327
Score = 132 (51.5 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 53/194 (27%), Positives = 84/194 (43%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSV--DQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+TGH V VAW+ L GSV DQ +W + K + + H V+ L
Sbjct: 213 FTGHSAVVEDVAWHLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHL-VDAHTAEVNCLS 270
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELS--GENINITYKPDG-THIAVGNRDD 130
++P ++AT S DKTV LWD R+ K S E + + P T +A D
Sbjct: 271 FNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDR 330
Query: 131 ELTILDVRKFKPIHRRKFGYEVN-EIAWNMTGEMFFLTTGN-AGCYCIAIDPMGRYFAVG 188
L + D+ K G E + E A + E+ F+ G+ A + +P +
Sbjct: 331 RLNVWDLSKI--------GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 382
Query: 189 -SADSLVSLWDISE 201
S D+++ +W ++E
Sbjct: 383 VSEDNIMQIWQMAE 396
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 58/220 (26%), Positives = 94/220 (42%)
Query: 33 TKLASGSV---DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89
TK S V D T +P G D+ LRGH L W+ + + +AS D
Sbjct: 132 TKTPSSDVLVFDYTKHPAKPDPSGECN-PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDH 190
Query: 90 TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG 149
TV LWD +G ++ ++ T G H AV + DV + +H FG
Sbjct: 191 TVCLWDINAGP--KEGKIVDAKAIFT----G-HSAV--------VEDVA-WHLLHESLFG 234
Query: 150 YEVNE---IAW----NMTGEMFFLTTGN-AGCYCIAIDPMGRYF-AVGSADSLVSLWDIS 200
++ + W N T + L + A C++ +P + A GSAD V+LWD+
Sbjct: 235 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 294
Query: 201 EM-LCVRTFTKLEWPVRTISFS-HTGDYIASASEDLFIDI 238
+ L + TF + + + +S H +AS+ D +++
Sbjct: 295 NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 334
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 155 (59.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 42/163 (25%), Positives = 76/163 (46%)
Query: 18 GHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHG-HGKVKDIE--LRGHADSVDQLC 73
GH+K+ + ++WN L S S D T +W I GK+ D + GH+ V+ +
Sbjct: 165 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 224
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---IN-ITYKPDGTHI-AVGNR 128
W H L + + D+ + +WD RS S+ + L + +N +++ P I A G+
Sbjct: 225 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 284
Query: 129 DDELTILDVRKFK-PIHR-RKFGYEVNEIAWNMTGEMFFLTTG 169
D + + D+R K +H E+ ++ W+ E ++G
Sbjct: 285 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSG 327
Score = 132 (51.5 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 53/194 (27%), Positives = 84/194 (43%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSV--DQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+TGH V VAW+ L GSV DQ +W + K + + H V+ L
Sbjct: 213 FTGHSAVVEDVAWHLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHL-VDAHTAEVNCLS 270
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELS--GENINITYKPDG-THIAVGNRDD 130
++P ++AT S DKTV LWD R+ K S E + + P T +A D
Sbjct: 271 FNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDR 330
Query: 131 ELTILDVRKFKPIHRRKFGYEVN-EIAWNMTGEMFFLTTGN-AGCYCIAIDPMGRYFAVG 188
L + D+ K G E + E A + E+ F+ G+ A + +P +
Sbjct: 331 RLNVWDLSKI--------GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 382
Query: 189 -SADSLVSLWDISE 201
S D+++ +W ++E
Sbjct: 383 VSEDNIMQIWQMAE 396
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 58/220 (26%), Positives = 94/220 (42%)
Query: 33 TKLASGSV---DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89
TK S V D T +P G D+ LRGH L W+ + + +AS D
Sbjct: 132 TKTPSSDVLVFDYTKHPAKPDPSGECN-PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDH 190
Query: 90 TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG 149
TV LWD +G ++ ++ T G H AV + DV + +H FG
Sbjct: 191 TVCLWDINAGP--KEGKIVDAKAIFT----G-HSAV--------VEDVA-WHLLHESLFG 234
Query: 150 YEVNE---IAW----NMTGEMFFLTTGN-AGCYCIAIDPMGRYF-AVGSADSLVSLWDIS 200
++ + W N T + L + A C++ +P + A GSAD V+LWD+
Sbjct: 235 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 294
Query: 201 EM-LCVRTFTKLEWPVRTISFS-HTGDYIASASEDLFIDI 238
+ L + TF + + + +S H +AS+ D +++
Sbjct: 295 NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 334
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 124 (48.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 40/128 (31%), Positives = 62/128 (48%)
Query: 157 WNM-TGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ TG+ + G+ G C +A+ P + F G+ D+ LWD+ E C +TFT E
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESD 228
Query: 215 VRTISFSHTGDYIASASED----LF-IDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLA 269
+ I F G+ I + S+D LF + T + I C + SV ++ LL
Sbjct: 229 INAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSDESIIC--GITSVAFSLSGRLL- 285
Query: 270 YAG-DDKN 276
+AG DD N
Sbjct: 286 FAGYDDFN 293
Score = 70 (29.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENINITYKPDG 120
LRGH + + W + L+ +AS D + +WD + L S + Y P G
Sbjct: 51 LRGHLAKIYAMHW-ATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 121 THIAVGNRDDELTILDVR 138
+A G D+ +I ++
Sbjct: 110 NFVACGGLDNMCSIYSLK 127
Score = 64 (27.6 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 29/128 (22%), Positives = 46/128 (35%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH K++++ W L S S D VW + + KV I LR S C
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVW--DTYTTNKVHAIPLRS---SWVMTC 103
Query: 74 WDPKHADLIATASGDKTVRLWD--ARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD 129
+ +A D ++ +R G ELS ++ D +I + D
Sbjct: 104 AYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGD 163
Query: 130 DELTILDV 137
+ D+
Sbjct: 164 TTCALWDI 171
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 124 (48.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 40/128 (31%), Positives = 62/128 (48%)
Query: 157 WNM-TGEMFFLTTGNAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
W++ TG+ + G+ G C +A+ P + F G+ D+ LWD+ E C +TFT E
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESD 228
Query: 215 VRTISFSHTGDYIASASED----LF-IDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLA 269
+ I F G+ I + S+D LF + T + I C + SV ++ LL
Sbjct: 229 INAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSDESIIC--GITSVAFSLSGRLL- 285
Query: 270 YAG-DDKN 276
+AG DD N
Sbjct: 286 FAGYDDFN 293
Score = 70 (29.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENINITYKPDG 120
LRGH + + W + L+ +AS D + +WD + L S + Y P G
Sbjct: 51 LRGHLAKIYAMHW-ATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 121 THIAVGNRDDELTILDVR 138
+A G D+ +I ++
Sbjct: 110 NFVACGGLDNMCSIYSLK 127
Score = 64 (27.6 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 29/128 (22%), Positives = 46/128 (35%)
Query: 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
R GH K++++ W L S S D VW + + KV I LR S C
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVW--DTYTTNKVHAIPLRS---SWVMTC 103
Query: 74 WDPKHADLIATASGDKTVRLWD--ARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD 129
+ +A D ++ +R G ELS ++ D +I + D
Sbjct: 104 AYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGD 163
Query: 130 DELTILDV 137
+ D+
Sbjct: 164 TTCALWDI 171
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 39/159 (24%), Positives = 77/159 (48%)
Query: 18 GHKKKVHSVAWNCTGTK-LASGSVDQTARVWHIEPHGHGKVKD-IEL-RGHADSVDQLCW 74
GH+++ + +AW+ L SGS DQ +W + KV + + + GH ++ + W
Sbjct: 167 GHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAW 226
Query: 75 DPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITYKPDGTHI-AVGNRDDEL 132
K+ ++ +A D + +WD R+ + Q ++ IN +++ P + A + D +
Sbjct: 227 HMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTV 286
Query: 133 TILDVRKFK-PIH-RRKFGYEVNEIAWNMTGEMFFLTTG 169
+ D+RK P+H K EV ++ W+ E ++G
Sbjct: 287 ALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSG 325
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 42/163 (25%), Positives = 76/163 (46%)
Query: 18 GHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHG-HGKVKDIE--LRGHADSVDQLC 73
GH+K+ + ++WN L S S D T +W I GK+ D + GH+ V+ +
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---IN-ITYKPDGTHI-AVGNR 128
W H L + + D+ + +WD RS S+ + L + +N +++ P I A G+
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 129 DDELTILDVRKFK-PIHR-RKFGYEVNEIAWNMTGEMFFLTTG 169
D + + D+R K +H E+ ++ W+ E ++G
Sbjct: 294 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSG 336
Score = 132 (51.5 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 53/194 (27%), Positives = 84/194 (43%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSV--DQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+TGH V VAW+ L GSV DQ +W + K + + H V+ L
Sbjct: 222 FTGHSAVVEDVAWHLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHL-VDAHTAEVNCLS 279
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELS--GENINITYKPDG-THIAVGNRDD 130
++P ++AT S DKTV LWD R+ K S E + + P T +A D
Sbjct: 280 FNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDR 339
Query: 131 ELTILDVRKFKPIHRRKFGYEVN-EIAWNMTGEMFFLTTGN-AGCYCIAIDPMGRYFAVG 188
L + D+ K G E + E A + E+ F+ G+ A + +P +
Sbjct: 340 RLNVWDLSKI--------GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
Query: 189 -SADSLVSLWDISE 201
S D+++ +W ++E
Sbjct: 392 VSEDNIMQIWQMAE 405
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 58/220 (26%), Positives = 94/220 (42%)
Query: 33 TKLASGSV---DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89
TK S V D T +P G D+ LRGH L W+ + + +AS D
Sbjct: 141 TKTPSSDVLVFDYTKHPAKPDPSGECN-PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDH 199
Query: 90 TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG 149
TV LWD +G ++ ++ T G H AV + DV + +H FG
Sbjct: 200 TVCLWDINAGP--KEGKIVDAKAIFT----G-HSAV--------VEDVA-WHLLHESLFG 243
Query: 150 YEVNE---IAW----NMTGEMFFLTTGN-AGCYCIAIDPMGRYF-AVGSADSLVSLWDIS 200
++ + W N T + L + A C++ +P + A GSAD V+LWD+
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303
Query: 201 EM-LCVRTFTKLEWPVRTISFS-HTGDYIASASEDLFIDI 238
+ L + TF + + + +S H +AS+ D +++
Sbjct: 304 NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 42/163 (25%), Positives = 76/163 (46%)
Query: 18 GHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHG-HGKVKDIE--LRGHADSVDQLC 73
GH+K+ + ++WN L S S D T +W I GK+ D + GH+ V+ +
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---IN-ITYKPDGTHI-AVGNR 128
W H L + + D+ + +WD RS S+ + L + +N +++ P I A G+
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 129 DDELTILDVRKFK-PIHR-RKFGYEVNEIAWNMTGEMFFLTTG 169
D + + D+R K +H E+ ++ W+ E ++G
Sbjct: 294 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSG 336
Score = 132 (51.5 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 53/194 (27%), Positives = 84/194 (43%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSV--DQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+TGH V VAW+ L GSV DQ +W + K + + H V+ L
Sbjct: 222 FTGHSAVVEDVAWHLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHL-VDAHTAEVNCLS 279
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELS--GENINITYKPDG-THIAVGNRDD 130
++P ++AT S DKTV LWD R+ K S E + + P T +A D
Sbjct: 280 FNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDR 339
Query: 131 ELTILDVRKFKPIHRRKFGYEVN-EIAWNMTGEMFFLTTGN-AGCYCIAIDPMGRYFAVG 188
L + D+ K G E + E A + E+ F+ G+ A + +P +
Sbjct: 340 RLNVWDLSKI--------GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
Query: 189 -SADSLVSLWDISE 201
S D+++ +W ++E
Sbjct: 392 VSEDNIMQIWQMAE 405
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 58/220 (26%), Positives = 94/220 (42%)
Query: 33 TKLASGSV---DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89
TK S V D T +P G D+ LRGH L W+ + + +AS D
Sbjct: 141 TKTPSSDVLVFDYTKHPAKPDPSGECN-PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDH 199
Query: 90 TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG 149
TV LWD +G ++ ++ T G H AV + DV + +H FG
Sbjct: 200 TVCLWDINAGP--KEGKIVDAKAIFT----G-HSAV--------VEDVA-WHLLHESLFG 243
Query: 150 YEVNE---IAW----NMTGEMFFLTTGN-AGCYCIAIDPMGRYF-AVGSADSLVSLWDIS 200
++ + W N T + L + A C++ +P + A GSAD V+LWD+
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303
Query: 201 EM-LCVRTFTKLEWPVRTISFS-HTGDYIASASEDLFIDI 238
+ L + TF + + + +S H +AS+ D +++
Sbjct: 304 NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 42/163 (25%), Positives = 76/163 (46%)
Query: 18 GHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHG-HGKVKDIE--LRGHADSVDQLC 73
GH+K+ + ++WN L S S D T +W I GK+ D + GH+ V+ +
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---IN-ITYKPDGTHI-AVGNR 128
W H L + + D+ + +WD RS S+ + L + +N +++ P I A G+
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 129 DDELTILDVRKFK-PIHR-RKFGYEVNEIAWNMTGEMFFLTTG 169
D + + D+R K +H E+ ++ W+ E ++G
Sbjct: 294 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSG 336
Score = 132 (51.5 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 53/194 (27%), Positives = 84/194 (43%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSV--DQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+TGH V VAW+ L GSV DQ +W + K + + H V+ L
Sbjct: 222 FTGHSAVVEDVAWHLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHL-VDAHTAEVNCLS 279
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELS--GENINITYKPDG-THIAVGNRDD 130
++P ++AT S DKTV LWD R+ K S E + + P T +A D
Sbjct: 280 FNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDR 339
Query: 131 ELTILDVRKFKPIHRRKFGYEVN-EIAWNMTGEMFFLTTGN-AGCYCIAIDPMGRYFAVG 188
L + D+ K G E + E A + E+ F+ G+ A + +P +
Sbjct: 340 RLNVWDLSKI--------GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
Query: 189 -SADSLVSLWDISE 201
S D+++ +W ++E
Sbjct: 392 VSEDNIMQIWQMAE 405
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 58/220 (26%), Positives = 94/220 (42%)
Query: 33 TKLASGSV---DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89
TK S V D T +P G D+ LRGH L W+ + + +AS D
Sbjct: 141 TKTPSSDVLVFDYTKHPAKPDPSGECN-PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDH 199
Query: 90 TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG 149
TV LWD +G ++ ++ T G H AV + DV + +H FG
Sbjct: 200 TVCLWDINAGP--KEGKIVDAKAIFT----G-HSAV--------VEDVA-WHLLHESLFG 243
Query: 150 YEVNE---IAW----NMTGEMFFLTTGN-AGCYCIAIDPMGRYF-AVGSADSLVSLWDIS 200
++ + W N T + L + A C++ +P + A GSAD V+LWD+
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303
Query: 201 EM-LCVRTFTKLEWPVRTISFS-HTGDYIASASEDLFIDI 238
+ L + TF + + + +S H +AS+ D +++
Sbjct: 304 NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 42/163 (25%), Positives = 76/163 (46%)
Query: 18 GHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHG-HGKVKDIE--LRGHADSVDQLC 73
GH+K+ + ++WN L S S D T +W I GK+ D + GH+ V+ +
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---IN-ITYKPDGTHI-AVGNR 128
W H L + + D+ + +WD RS S+ + L + +N +++ P I A G+
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 129 DDELTILDVRKFK-PIHR-RKFGYEVNEIAWNMTGEMFFLTTG 169
D + + D+R K +H E+ ++ W+ E ++G
Sbjct: 294 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSG 336
Score = 132 (51.5 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 53/194 (27%), Positives = 84/194 (43%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSV--DQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+TGH V VAW+ L GSV DQ +W + K + + H V+ L
Sbjct: 222 FTGHSAVVEDVAWHLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHL-VDAHTAEVNCLS 279
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELS--GENINITYKPDG-THIAVGNRDD 130
++P ++AT S DKTV LWD R+ K S E + + P T +A D
Sbjct: 280 FNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDR 339
Query: 131 ELTILDVRKFKPIHRRKFGYEVN-EIAWNMTGEMFFLTTGN-AGCYCIAIDPMGRYFAVG 188
L + D+ K G E + E A + E+ F+ G+ A + +P +
Sbjct: 340 RLNVWDLSKI--------GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
Query: 189 -SADSLVSLWDISE 201
S D+++ +W ++E
Sbjct: 392 VSEDNIMQIWQMAE 405
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 58/220 (26%), Positives = 94/220 (42%)
Query: 33 TKLASGSV---DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89
TK S V D T +P G D+ LRGH L W+ + + +AS D
Sbjct: 141 TKTPSSDVLVFDYTKHPAKPDPSGECN-PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDH 199
Query: 90 TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG 149
TV LWD +G ++ ++ T G H AV + DV + +H FG
Sbjct: 200 TVCLWDINAGP--KEGKIVDAKAIFT----G-HSAV--------VEDVA-WHLLHESLFG 243
Query: 150 YEVNE---IAW----NMTGEMFFLTTGN-AGCYCIAIDPMGRYF-AVGSADSLVSLWDIS 200
++ + W N T + L + A C++ +P + A GSAD V+LWD+
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303
Query: 201 EM-LCVRTFTKLEWPVRTISFS-HTGDYIASASEDLFIDI 238
+ L + TF + + + +S H +AS+ D +++
Sbjct: 304 NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 42/163 (25%), Positives = 76/163 (46%)
Query: 18 GHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHG-HGKVKDIE--LRGHADSVDQLC 73
GH+K+ + ++WN L S S D T +W I GK+ D + GH+ V+ +
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---IN-ITYKPDGTHI-AVGNR 128
W H L + + D+ + +WD RS S+ + L + +N +++ P I A G+
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 129 DDELTILDVRKFK-PIHR-RKFGYEVNEIAWNMTGEMFFLTTG 169
D + + D+R K +H E+ ++ W+ E ++G
Sbjct: 294 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSG 336
Score = 132 (51.5 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 53/194 (27%), Positives = 84/194 (43%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSV--DQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+TGH V VAW+ L GSV DQ +W + K + + H V+ L
Sbjct: 222 FTGHSAVVEDVAWHLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHL-VDAHTAEVNCLS 279
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELS--GENINITYKPDG-THIAVGNRDD 130
++P ++AT S DKTV LWD R+ K S E + + P T +A D
Sbjct: 280 FNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDR 339
Query: 131 ELTILDVRKFKPIHRRKFGYEVN-EIAWNMTGEMFFLTTGN-AGCYCIAIDPMGRYFAVG 188
L + D+ K G E + E A + E+ F+ G+ A + +P +
Sbjct: 340 RLNVWDLSKI--------GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
Query: 189 -SADSLVSLWDISE 201
S D+++ +W ++E
Sbjct: 392 VSEDNIMQIWQMAE 405
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 58/220 (26%), Positives = 94/220 (42%)
Query: 33 TKLASGSV---DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89
TK S V D T +P G D+ LRGH L W+ + + +AS D
Sbjct: 141 TKTPSSDVLVFDYTKHPAKPDPSGECN-PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDH 199
Query: 90 TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG 149
TV LWD +G ++ ++ T G H AV + DV + +H FG
Sbjct: 200 TVCLWDINAGP--KEGKIVDAKAIFT----G-HSAV--------VEDVA-WHLLHESLFG 243
Query: 150 YEVNE---IAW----NMTGEMFFLTTGN-AGCYCIAIDPMGRYF-AVGSADSLVSLWDIS 200
++ + W N T + L + A C++ +P + A GSAD V+LWD+
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303
Query: 201 EM-LCVRTFTKLEWPVRTISFS-HTGDYIASASEDLFIDI 238
+ L + TF + + + +S H +AS+ D +++
Sbjct: 304 NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 42/163 (25%), Positives = 76/163 (46%)
Query: 18 GHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHG-HGKVKDIE--LRGHADSVDQLC 73
GH+K+ + ++WN L S S D T +W I GK+ D + GH+ V+ +
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---IN-ITYKPDGTHI-AVGNR 128
W H L + + D+ + +WD RS S+ + L + +N +++ P I A G+
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 129 DDELTILDVRKFK-PIHR-RKFGYEVNEIAWNMTGEMFFLTTG 169
D + + D+R K +H E+ ++ W+ E ++G
Sbjct: 294 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSG 336
Score = 132 (51.5 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 53/194 (27%), Positives = 84/194 (43%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSV--DQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+TGH V VAW+ L GSV DQ +W + K + + H V+ L
Sbjct: 222 FTGHSAVVEDVAWHLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHL-VDAHTAEVNCLS 279
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELS--GENINITYKPDG-THIAVGNRDD 130
++P ++AT S DKTV LWD R+ K S E + + P T +A D
Sbjct: 280 FNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDR 339
Query: 131 ELTILDVRKFKPIHRRKFGYEVN-EIAWNMTGEMFFLTTGN-AGCYCIAIDPMGRYFAVG 188
L + D+ K G E + E A + E+ F+ G+ A + +P +
Sbjct: 340 RLNVWDLSKI--------GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
Query: 189 -SADSLVSLWDISE 201
S D+++ +W ++E
Sbjct: 392 VSEDNIMQIWQMAE 405
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 58/220 (26%), Positives = 94/220 (42%)
Query: 33 TKLASGSV---DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89
TK S V D T +P G D+ LRGH L W+ + + +AS D
Sbjct: 141 TKTPSSDVLVFDYTKHPAKPDPSGECN-PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDH 199
Query: 90 TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG 149
TV LWD +G ++ ++ T G H AV + DV + +H FG
Sbjct: 200 TVCLWDINAGP--KEGKIVDAKAIFT----G-HSAV--------VEDVA-WHLLHESLFG 243
Query: 150 YEVNE---IAW----NMTGEMFFLTTGN-AGCYCIAIDPMGRYF-AVGSADSLVSLWDIS 200
++ + W N T + L + A C++ +P + A GSAD V+LWD+
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303
Query: 201 EM-LCVRTFTKLEWPVRTISFS-HTGDYIASASEDLFIDI 238
+ L + TF + + + +S H +AS+ D +++
Sbjct: 304 NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 42/163 (25%), Positives = 76/163 (46%)
Query: 18 GHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHG-HGKVKDIE--LRGHADSVDQLC 73
GH+K+ + ++WN L S S D T +W I GK+ D + GH+ V+ +
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGEN---IN-ITYKPDGTHI-AVGNR 128
W H L + + D+ + +WD RS S+ + L + +N +++ P I A G+
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 129 DDELTILDVRKFK-PIHR-RKFGYEVNEIAWNMTGEMFFLTTG 169
D + + D+R K +H E+ ++ W+ E ++G
Sbjct: 294 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSG 336
Score = 132 (51.5 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 53/194 (27%), Positives = 84/194 (43%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSV--DQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+TGH V VAW+ L GSV DQ +W + K + + H V+ L
Sbjct: 222 FTGHSAVVEDVAWHLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHL-VDAHTAEVNCLS 279
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELS--GENINITYKPDG-THIAVGNRDD 130
++P ++AT S DKTV LWD R+ K S E + + P T +A D
Sbjct: 280 FNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDR 339
Query: 131 ELTILDVRKFKPIHRRKFGYEVN-EIAWNMTGEMFFLTTGN-AGCYCIAIDPMGRYFAVG 188
L + D+ K G E + E A + E+ F+ G+ A + +P +
Sbjct: 340 RLNVWDLSKI--------GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
Query: 189 -SADSLVSLWDISE 201
S D+++ +W ++E
Sbjct: 392 VSEDNIMQIWQMAE 405
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 58/220 (26%), Positives = 94/220 (42%)
Query: 33 TKLASGSV---DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89
TK S V D T +P G D+ LRGH L W+ + + +AS D
Sbjct: 141 TKTPSSDVLVFDYTKHPAKPDPSGECN-PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDH 199
Query: 90 TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG 149
TV LWD +G ++ ++ T G H AV + DV + +H FG
Sbjct: 200 TVCLWDINAGP--KEGKIVDAKAIFT----G-HSAV--------VEDVA-WHLLHESLFG 243
Query: 150 YEVNE---IAW----NMTGEMFFLTTGN-AGCYCIAIDPMGRYF-AVGSADSLVSLWDIS 200
++ + W N T + L + A C++ +P + A GSAD V+LWD+
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303
Query: 201 EM-LCVRTFTKLEWPVRTISFS-HTGDYIASASEDLFIDI 238
+ L + TF + + + +S H +AS+ D +++
Sbjct: 304 NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 43/163 (26%), Positives = 74/163 (45%)
Query: 18 GHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHG-HGKVKDIE--LRGHADSVDQLC 73
GH+K+ + ++WN L S S D T +W I GKV D + GH+ V+ +
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVA 233
Query: 74 WDPKHADLIATASGDKTVRLWDARSG---KCSQQAELSGENIN-ITYKPDGTHI-AVGNR 128
W H L + + D+ + +WD RS K S + +N +++ P I A G+
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 129 DDELTILDVRKFK-PIHR-RKFGYEVNEIAWNMTGEMFFLTTG 169
D + + D+R K +H E+ ++ W+ E ++G
Sbjct: 294 DKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSG 336
Score = 131 (51.2 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 53/194 (27%), Positives = 84/194 (43%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSV--DQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+TGH V VAW+ L GSV DQ +W + K + H V+ L
Sbjct: 222 FTGHSAVVEDVAWHLLHESLF-GSVADDQKLMIWDTRSNTTSKPSH-SVDAHTAEVNCLS 279
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELS--GENINITYKPDG-THIAVGNRDD 130
++P ++AT S DKTV LWD R+ K + S E + + P T +A D
Sbjct: 280 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDR 339
Query: 131 ELTILDVRKFKPIHRRKFGYEVN-EIAWNMTGEMFFLTTGN-AGCYCIAIDPMGRYFAVG 188
L + D+ K G E + E A + E+ F+ G+ A + +P +
Sbjct: 340 RLNVWDLSKI--------GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
Query: 189 -SADSLVSLWDISE 201
S D+++ +W ++E
Sbjct: 392 VSEDNIMQIWQMAE 405
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 43/163 (26%), Positives = 74/163 (45%)
Query: 18 GHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHG-HGKVKDIE--LRGHADSVDQLC 73
GH+K+ + ++WN L S S D T +W I GKV D + GH+ V+ +
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVA 233
Query: 74 WDPKHADLIATASGDKTVRLWDARSG---KCSQQAELSGENIN-ITYKPDGTHI-AVGNR 128
W H L + + D+ + +WD RS K S + +N +++ P I A G+
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 129 DDELTILDVRKFK-PIHR-RKFGYEVNEIAWNMTGEMFFLTTG 169
D + + D+R K +H E+ ++ W+ E ++G
Sbjct: 294 DKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSG 336
Score = 131 (51.2 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 53/194 (27%), Positives = 84/194 (43%)
Query: 16 YTGHKKKVHSVAWNCTGTKLASGSV--DQTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73
+TGH V VAW+ L GSV DQ +W + K + H V+ L
Sbjct: 222 FTGHSAVVEDVAWHLLHESLF-GSVADDQKLMIWDTRSNTTSKPSH-SVDAHTAEVNCLS 279
Query: 74 WDPKHADLIATASGDKTVRLWDARSGKCSQQAELS--GENINITYKPDG-THIAVGNRDD 130
++P ++AT S DKTV LWD R+ K + S E + + P T +A D
Sbjct: 280 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDR 339
Query: 131 ELTILDVRKFKPIHRRKFGYEVN-EIAWNMTGEMFFLTTGN-AGCYCIAIDPMGRYFAVG 188
L + D+ K G E + E A + E+ F+ G+ A + +P +
Sbjct: 340 RLNVWDLSKI--------GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
Query: 189 -SADSLVSLWDISE 201
S D+++ +W ++E
Sbjct: 392 VSEDNIMQIWQMAE 405
>POMBASE|SPAC12G12.14c [details] [associations]
symbol:pfs2 "WD repeat protein Pfs2" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=ISO] [GO:0006379 "mRNA
cleavage" evidence=ISO] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC12G12.14c GO:GO:0005829 EMBL:CU329670 GO:GO:0051301
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006378 GO:GO:0000070 GO:GO:2000045 GO:GO:0005847
GO:GO:0006379 KO:K15542 HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD
PIR:T37587 RefSeq:NP_592884.1 ProteinModelPortal:Q9UTN4
STRING:Q9UTN4 EnsemblFungi:SPAC12G12.14c.1 GeneID:2543089
KEGG:spo:SPAC12G12.14c OMA:TALCTQW NextBio:20804117 Uniprot:Q9UTN4
Length = 509
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 46/161 (28%), Positives = 76/161 (47%)
Query: 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH 78
H+ +V VA++ +K + S D + +VW+ H ++++L GH V + W P
Sbjct: 163 HEMEVRDVAFSPNDSKFVTASDDGSLKVWNF----HMSTEELKLTGHGWDVKTVDWHPSK 218
Query: 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGENINITY----KPDGT-HIAVGNRDDELT 133
L+A+ S D V+ WD R+G C A L G I K G+ ++A +RD
Sbjct: 219 G-LLASGSKDNLVKFWDPRTGTCI--ATLHGHKNTIMQASFQKNFGSNYLATVSRDSTCR 275
Query: 134 ILDVRKFKPIHRRKFGYE--VNEIAWNMTGEMFFLTTGNAG 172
+ D+R K + + G+E VN + W+ T G+ G
Sbjct: 276 VFDLRAMKDVRVLR-GHEKDVNCVTWHPLYPNLLTTGGSDG 315
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 47/210 (22%), Positives = 90/210 (42%)
Query: 3 ESSIPFKNLH-SRE---YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK 58
+ S+ N H S E TGH V +V W+ + LASGS D + W +P +
Sbjct: 185 DGSLKVWNFHMSTEELKLTGHGWDVKTVDWHPSKGLLASGSKDNLVKFW--DPRTGTCIA 242
Query: 59 DIELRGHADSVDQLCWDPKH-ADLIATASGDKTVRLWDARSGKCSQQAELSGENIN-ITY 116
L GH +++ Q + ++ +AT S D T R++D R+ K + +++N +T+
Sbjct: 243 T--LHGHKNTIMQASFQKNFGSNYLATVSRDSTCRVFDLRAMKDVRVLRGHEKDVNCVTW 300
Query: 117 KPDGTHI-AVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTG-----N 170
P ++ G D + + + + ++K+ + + + + + + T +
Sbjct: 301 HPLYPNLLTTGGSDGSVNHYSLDEPPLLSQQKYHEKHPNVTLSASSYLLYPTAEIPFAHD 360
Query: 171 AGCYCIAIDPMGRYFAVGSADSLVSLWDIS 200
G + + P+G GS D W S
Sbjct: 361 LGIWSMQYHPLGHLLCTGSNDKTTRFWSRS 390
Score = 106 (42.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 38/134 (28%), Positives = 54/134 (40%)
Query: 157 WN--MTGEMFFLTTGNAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 214
WN M+ E LT + P A GS D+LV WD C+ T +
Sbjct: 191 WNFHMSTEELKLTGHGWDVKTVDWHPSKGLLASGSKDNLVKFWDPRTGTCIATLHGHKNT 250
Query: 215 VRTISFSHT--GDYIASASEDLFIDISNVHTGRTVHQIPCRAA-MNSVEWNPKY-NLLAY 270
+ SF +Y+A+ S D + ++ + V + +N V W+P Y NLL
Sbjct: 251 IMQASFQKNFGSNYLATVSRDSTCRVFDLRAMKDVRVLRGHEKDVNCVTWHPLYPNLLTT 310
Query: 271 AGDDK--NKYQADE 282
G D N Y DE
Sbjct: 311 GGSDGSVNHYSLDE 324
Score = 54 (24.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 112 INIT-YKPDGTHIAVGNRDDELTILDVRKFK-PIHRRKFGYEVNEIAWNMTGEMFFLTTG 169
IN+ + PDG + G+ E T+ + F + + Y V W+ G +L +G
Sbjct: 84 INVVRWTPDGRRLLTGSSTGEFTLWNGLTFNFELINQSHDYAVRCAEWSTDGR--WLISG 141
Query: 170 NAG 172
+ G
Sbjct: 142 DGG 144
Score = 50 (22.7 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 30/160 (18%), Positives = 61/160 (38%)
Query: 4 SSIPFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR 63
SS+ K +H+ + ++ V W G +L +GS +W+ G + EL
Sbjct: 66 SSLCTKYIHTSANKA-RHVINVVRWTPDGRRLLTGSSTGEFTLWN------GLTFNFELI 118
Query: 64 GHADSVDQLC--WDPKHADLIATASGDKTVRLWDARSG--KCSQQAELSGENINITYKPD 119
+ C W LI+ G V+ ++ K Q E+ E ++ + P+
Sbjct: 119 NQSHDYAVRCAEWSTDGRWLIS-GDGGGMVKYFEPNLNNVKIVQAHEM--EVRDVAFSPN 175
Query: 120 GTHIAVGNRDDELTILDVR-KFKPIHRRKFGYEVNEIAWN 158
+ + D L + + + + G++V + W+
Sbjct: 176 DSKFVTASDDGSLKVWNFHMSTEELKLTGHGWDVKTVDWH 215
>POMBASE|SPAC23C4.02 [details] [associations]
symbol:crn1 "actin binding protein, coronin Crn1"
species:4896 "Schizosaccharomyces pombe" [GO:0003779 "actin
binding" evidence=ISS] [GO:0005826 "actomyosin contractile ring"
evidence=IDA] [GO:0030036 "actin cytoskeleton organization"
evidence=ISS] [GO:0030041 "actin filament polymerization"
evidence=NAS] [GO:0030139 "endocytic vesicle" evidence=IDA]
[GO:0030479 "actin cortical patch" evidence=IDA] [GO:0035838
"growing cell tip" evidence=IDA] [GO:0043234 "protein complex"
evidence=NAS] [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0051017 "actin filament bundle assembly" evidence=NAS]
[GO:0051286 "cell tip" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC23C4.02 GO:GO:0003779
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030479 GO:GO:0051017 GO:GO:0030041 GO:GO:0030139
GO:GO:0005826 GO:GO:0035838 HOGENOM:HOG000166356 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 PIR:T38258 RefSeq:NP_593175.1
ProteinModelPortal:O13923 STRING:O13923 PRIDE:O13923
EnsemblFungi:SPAC23C4.02.1 GeneID:2541961 KEGG:spo:SPAC23C4.02
OMA:LQDRRIA OrthoDB:EOG4TJ02B NextBio:20803045 Uniprot:O13923
Length = 601
Score = 157 (60.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 44/165 (26%), Positives = 78/165 (47%)
Query: 16 YTGHKKKVHSVAWNCTGTK-LASGSVDQTARVWHIEPHGHGKVK---DI----ELRGHAD 67
+ GH V WN + LASG D +W + P + ++ D+ EL+GH+
Sbjct: 77 FRGHTAAVLDTDWNPFHDQVLASGGDDSKIMIWKV-PEDYTVMEPYEDVHPIAELKGHSR 135
Query: 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN 127
V + + P A+++A++S D T++LWD G ++ ++++ DGT + +
Sbjct: 136 KVGLVQYHPTAANVLASSSADNTIKLWDCEKGVAHVSLKMDVMCQSMSFNADGTRLVTTS 195
Query: 128 RDDELTILDVRKFKPIH--RRKFGYEVNEIAWNMTGEMF-FLTTG 169
RD ++ + D R KP+ G + + W G + F TTG
Sbjct: 196 RDKKVRVWDPRTDKPVSVGNGHAGAKNPRVVW--LGSLDRFATTG 238
WARNING: HSPs involving 786 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 293 293 0.00091 115 3 11 22 0.38 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1036
No. of states in DFA: 617 (66 KB)
Total size of DFA: 244 KB (2130 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.14u 0.17s 23.31t Elapsed: 00:00:01
Total cpu time: 23.23u 0.17s 23.40t Elapsed: 00:00:01
Start: Fri May 10 14:07:24 2013 End: Fri May 10 14:07:25 2013
WARNINGS ISSUED: 2