BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022717
(293 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O45924|ODBA_CAEEL 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Caenorhabditis elegans GN=Y39E4A.3 PE=1 SV=2
Length = 431
Score = 324 bits (830), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 150/282 (53%), Positives = 195/282 (69%), Gaps = 2/282 (0%)
Query: 8 REPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVG 67
RE GVLLWRG++M+ F NQC+GN D GKGRQMP+H+G+ + N+ T+SS + TQLP AVG
Sbjct: 142 REAGVLLWRGYTMENFMNQCYGNADDLGKGRQMPMHFGTKERNFVTISSPLTTQLPQAVG 201
Query: 68 AAYALKMDR-KDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISD 126
+AYA K + + AV YFGDG SEGD HAA NF+A + P+IF CRNNG+AISTP S+
Sbjct: 202 SAYAFKQQKDNNRIAVVYFGDGAASEGDAHAAFNFAATLKCPIIFFCRNNGYAISTPTSE 261
Query: 127 QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHT 186
Q+ DG KG AYG+ +IRVDGND LA+Y+A AR +A+ RP+LIEA+TYR+GHH+
Sbjct: 262 QYGGDGIAGKGPAYGLHTIRVDGNDLLAVYNATKEARRVAL-TNRPVLIEAMTYRLGHHS 320
Query: 187 TSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEA 246
TSDDST YR DE++ W P+TRF+K+I GWWN + E E + V+K++L A
Sbjct: 321 TSDDSTAYRSSDEVQTWGDKDHPITRFKKYITERGWWNEEKEMEWQKEVKKRVLTEFAAA 380
Query: 247 EKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 288
EK +K DLF DVYD P LR Q L + ++ + YP
Sbjct: 381 EKRKKAHYHDLFEDVYDELPLRLRRQRDELDAHVAEYKEHYP 422
>sp|Q54M22|ODBA_DICDI 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=bkdA PE=3 SV=1
Length = 441
Score = 318 bits (816), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 143/290 (49%), Positives = 198/290 (68%), Gaps = 1/290 (0%)
Query: 2 TTLSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQ 61
T + RE GV +WRGF++ + NQC N+ D GKGRQMP+H+GS K N T+SS + TQ
Sbjct: 141 TIFAQYRETGVFMWRGFTINDIINQCCTNEHDLGKGRQMPMHFGSRKINLQTISSPLTTQ 200
Query: 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIS 121
LP AVG++YA K+ + C + YFG+G SEGDFHAA+NF+A P IF CRNN WAIS
Sbjct: 201 LPQAVGSSYAQKLAGEKNCTIVYFGEGAASEGDFHAAMNFAAALSTPTIFFCRNNKWAIS 260
Query: 122 TPISDQFRSDGAVVKG-RAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTY 180
TP +Q++ DG +G YG+++IRVDGND A+Y+ AR++A+ E P+LIEA+TY
Sbjct: 261 TPSKEQYKGDGIAGRGPNGYGMKTIRVDGNDIWAVYNVTKLARKIAVEEQVPVLIEAMTY 320
Query: 181 RVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQIL 240
RVGHH+TSDDS++YR V+EI W+ ++P++R R ++ GWW+ E E ++ R +
Sbjct: 321 RVGHHSTSDDSSRYRTVEEINAWKEGKNPISRLRNYMNHKGWWSDAQEKETIANARTTVR 380
Query: 241 HALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYPSN 290
+L AEK KP I+++FTDVYD NL EQ+ L E +K +P +YP N
Sbjct: 381 ESLVNAEKQYKPSINEIFTDVYDKPTPNLIEQQKELIEHLKLYPDEYPLN 430
>sp|A5A6H9|ODBA_PANTR 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Pan
troglodytes GN=BCKDHA PE=2 SV=1
Length = 445
Score = 306 bits (785), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 139/281 (49%), Positives = 193/281 (68%)
Query: 8 REPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVG 67
RE GVL++R + ++ F QC+GN +D GKGRQMP+HYG + ++ T+SS +ATQ+P AVG
Sbjct: 159 REAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVG 218
Query: 68 AAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQ 127
AAYA K + + YFG+G SEGD HA NF+A E P+IF CRNNG+AISTP S+Q
Sbjct: 219 AAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQ 278
Query: 128 FRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTT 187
+R DG +G YG+ SIRVDGND A+Y+A AR A+ E +P LIEA+TYR+GHH+T
Sbjct: 279 YRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHST 338
Query: 188 SDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAE 247
SDDS+ YR VDE+ +W PV+R R ++ S GWW+ + E R RK+++ A ++AE
Sbjct: 339 SDDSSAYRSVDEVNYWDKQDHPVSRLRHYLLSQGWWDEEQEKAWRKQSRKKVMEAFEQAE 398
Query: 248 KAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 288
+ KP + LF+DVY P+ LR+Q+ SL ++ + + YP
Sbjct: 399 RKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYP 439
>sp|P50136|ODBA_MOUSE 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Mus
musculus GN=Bckdha PE=1 SV=1
Length = 442
Score = 306 bits (785), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 138/286 (48%), Positives = 194/286 (67%)
Query: 3 TLSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQL 62
RE GVL++R + ++ F +QC+GN D GKGRQMP+HYG + ++ T+SS +ATQ+
Sbjct: 151 VFGQYREAGVLMYRDYPLELFMSQCYGNVNDPGKGRQMPVHYGCKERHFVTISSPLATQI 210
Query: 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIST 122
P AVGAAYA K + + YFG+G SEGD HA NF+A E P+IF CRNNG+AIST
Sbjct: 211 PQAVGAAYAAKRANANRIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAIST 270
Query: 123 PISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 182
P S+Q+R DG +G YG++SIRVDGND A+Y+A AR A+ E +P LIEA+TYR+
Sbjct: 271 PTSEQYRGDGIAARGPGYGIKSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRI 330
Query: 183 GHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHA 242
GHH+TSDDS+ YR VDE+ +W P++R R+++ + GWW+ + E R RK+++ A
Sbjct: 331 GHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQEKAWRKQSRKKVMEA 390
Query: 243 LQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 288
++AE+ KP S LF+DVY P+ LR Q+ SL ++ + + YP
Sbjct: 391 FEQAERKLKPNPSLLFSDVYQEMPAQLRRQQESLARHLQTYGEHYP 436
>sp|Q8HXY4|ODBA_MACFA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Macaca fascicularis GN=BCKDHA PE=2 SV=1
Length = 445
Score = 306 bits (783), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 138/286 (48%), Positives = 193/286 (67%)
Query: 3 TLSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQL 62
RE GVL++R + ++ F QC+GN +D GKGRQMP+HYG + ++ T+SS +ATQ+
Sbjct: 154 VFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQI 213
Query: 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIST 122
P AVGAAYA K + + YFG+G SEGD HA NF+A E P+IF CRNNG+AIST
Sbjct: 214 PQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAIST 273
Query: 123 PISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 182
P S+Q+R DG +G YG+ SIRVDGND A+Y+A AR A+ E +P LIEA+TYR+
Sbjct: 274 PTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRI 333
Query: 183 GHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHA 242
GHH+TSDDS+ YR VDE+ +W P++R R ++ S GWW+ + E R RK+++ A
Sbjct: 334 GHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRKKVMKA 393
Query: 243 LQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 288
++AE+ KP + LF+DVY P+ LR+Q+ SL ++ + + YP
Sbjct: 394 FEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYP 439
>sp|P11960|ODBA_RAT 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
(Fragment) OS=Rattus norvegicus GN=Bckdha PE=1 SV=1
Length = 441
Score = 305 bits (782), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 138/286 (48%), Positives = 193/286 (67%)
Query: 3 TLSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQL 62
RE GVL++R + ++ F QC+GN +D GKGRQMP+HYG + ++ T+SS +ATQ+
Sbjct: 150 VFGQYREAGVLMYRDYPLELFMAQCYGNVSDPGKGRQMPVHYGCKERHFVTISSPLATQI 209
Query: 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIST 122
P AVGAAYA K + + YFG+G SEGD HA NF+A E P+IF CRNNG+AIST
Sbjct: 210 PQAVGAAYAAKRANANQIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAIST 269
Query: 123 PISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 182
P S+Q+R DG +G YG+ SIRVDGND A+Y+A AR A+ E +P LIEA+TYR+
Sbjct: 270 PTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRI 329
Query: 183 GHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHA 242
GHH+TSDDS+ YR VDE+ +W P++R R+++ + GWW+ + E R RK+++ A
Sbjct: 330 GHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQEKAWRKQSRKKVMEA 389
Query: 243 LQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 288
++AE+ KP S LF+DVY P+ LR Q+ SL ++ + + YP
Sbjct: 390 FEQAERKLKPNPSLLFSDVYQEMPAQLRRQQESLARHLQTYGEHYP 435
>sp|P12694|ODBA_HUMAN 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Homo
sapiens GN=BCKDHA PE=1 SV=2
Length = 445
Score = 305 bits (781), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 137/281 (48%), Positives = 193/281 (68%)
Query: 8 REPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVG 67
RE GVL++R + ++ F QC+GN +D GKGRQMP+HYG + ++ T+SS +ATQ+P AVG
Sbjct: 159 REAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVG 218
Query: 68 AAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQ 127
AAYA K + + YFG+G SEGD HA NF+A E P+IF CRNNG+AISTP S+Q
Sbjct: 219 AAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQ 278
Query: 128 FRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTT 187
+R DG +G YG+ SIRVDGND A+Y+A AR A+ E +P LIEA+TYR+GHH+T
Sbjct: 279 YRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHST 338
Query: 188 SDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAE 247
SDDS+ YR VDE+ +W P++R R ++ S GWW+ + E R R++++ A ++AE
Sbjct: 339 SDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAE 398
Query: 248 KAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 288
+ KP + LF+DVY P+ LR+Q+ SL ++ + + YP
Sbjct: 399 RKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYP 439
>sp|P11178|ODBA_BOVIN 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Bos
taurus GN=BCKDHA PE=2 SV=1
Length = 455
Score = 304 bits (779), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 138/286 (48%), Positives = 193/286 (67%)
Query: 3 TLSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQL 62
RE GVL++R + ++ F QC+GN +D GKGRQMP+HYG + ++ T+SS +ATQ+
Sbjct: 164 VFGQYREAGVLMYRDYPLELFMAQCYGNVSDLGKGRQMPVHYGCRERHFVTISSPLATQI 223
Query: 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIST 122
P AVGAAYA K + + YFG+G SEGD HA NF+A E P+IF CRNNG+AIST
Sbjct: 224 PQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAIST 283
Query: 123 PISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 182
P S+Q+R DG +G YG+ SIRVDGND A+Y+A AR A+ E +P LIEA+TYR+
Sbjct: 284 PTSEQYRGDGIAARGPGYGILSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRI 343
Query: 183 GHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHA 242
GHH+TSDDS+ YR VDE+ +W P++R R ++S GWW+ + E R RK+++ A
Sbjct: 344 GHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHHLQSRGWWDDEQEKAWRKQSRKKVMEA 403
Query: 243 LQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 288
++AE+ KP S +F+DVY P+ LR+Q+ SL ++ + + YP
Sbjct: 404 FEQAERKLKPNPSLIFSDVYQEMPAQLRKQQESLARHLQTYGEHYP 449
>sp|Q72GU1|ODBA_THET2 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
GN=TT_C1757 PE=3 SV=1
Length = 367
Score = 214 bits (546), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 166/274 (60%), Gaps = 3/274 (1%)
Query: 8 REPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVG 67
R+ G+ L G ++E Q KAD KGRQMP H GS N+FTV+S IA+ +P A G
Sbjct: 96 RDHGLALALGIPLKELFGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAG 155
Query: 68 AAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQ 127
AA ++K+ R AV FGDG TSEGD++A +NF+AV AP +F+C NN +AIS Q
Sbjct: 156 AAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFVCENNFYAISVDYRHQ 215
Query: 128 FRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMA-IGEGRPILIEALTYRVGHHT 186
S K A+G+ VDG D LA Y V A E A GEG P L+E YR G H+
Sbjct: 216 THSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEG-PSLVELRVYRYGPHS 274
Query: 187 TSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEA 246
++DD ++YRP +E+ +WR +DP+ RFR+++E+ G WN + E ++R +R ++ L+EA
Sbjct: 275 SADDDSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEA 333
Query: 247 EKAEKPPISDLFTDVYDVSPSNLREQEHSLRETI 280
E+A P +F DV+ P +L QE L+E +
Sbjct: 334 EEAGPVPPEWMFADVFAEKPWHLLRQEALLKEEL 367
>sp|Q5SLR4|ODBA_THET8 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
GN=TTHA0229 PE=1 SV=1
Length = 367
Score = 211 bits (538), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 165/274 (60%), Gaps = 3/274 (1%)
Query: 8 REPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVG 67
R+ G+ L G ++E Q KAD KGRQMP H GS N+FTV+S IA+ +P A G
Sbjct: 96 RDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAG 155
Query: 68 AAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQ 127
AA ++K+ R AV FGDG TSEGD++A +NF+AV AP +FI NN +AIS Q
Sbjct: 156 AAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQ 215
Query: 128 FRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMA-IGEGRPILIEALTYRVGHHT 186
S K A+G+ VDG D LA Y V A E A GEG P L+E YR G H+
Sbjct: 216 THSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEG-PSLVELRVYRYGPHS 274
Query: 187 TSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEA 246
++DD ++YRP +E+ +WR +DP+ RFR+++E+ G WN + E ++R +R ++ L+EA
Sbjct: 275 SADDDSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEA 333
Query: 247 EKAEKPPISDLFTDVYDVSPSNLREQEHSLRETI 280
E+A P +F DV+ P +L QE L+E +
Sbjct: 334 EEAGPVPPEWMFEDVFAEKPWHLLRQEALLKEEL 367
>sp|P60090|ODPA_STAAW Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MW2) GN=pdhA PE=3 SV=1
Length = 370
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 157/281 (55%), Gaps = 13/281 (4%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
L R+ ++W G + E F + KG Q P N + I Q
Sbjct: 101 LPGYRDVPQIIWHGLPLTE----AFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYI 151
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
A G A+ALK K+A A+TY GDGG+S+GDF+ +NF+A +AP IF+ +NN +AISTP
Sbjct: 152 QAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTP 211
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRV 182
S Q ++ K A G+ I+VDG DALA+Y A AR+ A+ GEG P LIE +TYR
Sbjct: 212 RSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEG-PTLIETMTYRY 270
Query: 183 GHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 241
G HT + DD T+YR DE W +DP+ RFRK++E+ G WN D E+E+ + I
Sbjct: 271 GPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKA 329
Query: 242 ALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKK 282
A++EA+ EK ++ L +Y+ P NL EQ +E K
Sbjct: 330 AIKEADNTEKQTVTSLMEIMYEDMPQNLAEQYEIYKEKESK 370
>sp|Q6GAC1|ODPA_STAAS Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MSSA476) GN=pdhA PE=3 SV=1
Length = 370
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 157/281 (55%), Gaps = 13/281 (4%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
L R+ ++W G + E F + KG Q P N + I Q
Sbjct: 101 LPGYRDVPQIIWHGLPLTE----AFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYI 151
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
A G A+ALK K+A A+TY GDGG+S+GDF+ +NF+A +AP IF+ +NN +AISTP
Sbjct: 152 QAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTP 211
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRV 182
S Q ++ K A G+ I+VDG DALA+Y A AR+ A+ GEG P LIE +TYR
Sbjct: 212 RSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEG-PTLIETMTYRY 270
Query: 183 GHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 241
G HT + DD T+YR DE W +DP+ RFRK++E+ G WN D E+E+ + I
Sbjct: 271 GPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKA 329
Query: 242 ALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKK 282
A++EA+ EK ++ L +Y+ P NL EQ +E K
Sbjct: 330 AIKEADNTEKQTVTSLMEIMYEDMPQNLAEQYEIYKEKESK 370
>sp|Q820A6|ODPA_STAAN Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain N315) GN=pdhA PE=1 SV=1
Length = 370
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 157/281 (55%), Gaps = 13/281 (4%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
L R+ ++W G + E F + KG Q P N + I Q
Sbjct: 101 LPGYRDVPQIIWHGLPLTE----AFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYI 151
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
A G A+ALK K+A A+TY GDGG+S+GDF+ +NF+A +AP IF+ +NN +AISTP
Sbjct: 152 QAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTP 211
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRV 182
S Q ++ K A G+ I+VDG DALA+Y A AR+ A+ GEG P LIE +TYR
Sbjct: 212 RSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEG-PTLIETMTYRY 270
Query: 183 GHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 241
G HT + DD T+YR DE W +DP+ RFRK++E+ G WN D E+E+ + I
Sbjct: 271 GPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKA 329
Query: 242 ALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKK 282
A++EA+ EK ++ L +Y+ P NL EQ +E K
Sbjct: 330 AIKEADNTEKQTVTSLMEIMYEDMPQNLAEQYEIYKEKESK 370
>sp|P60089|ODPA_STAAM Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=pdhA PE=1 SV=1
Length = 370
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 157/281 (55%), Gaps = 13/281 (4%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
L R+ ++W G + E F + KG Q P N + I Q
Sbjct: 101 LPGYRDVPQIIWHGLPLTE----AFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYI 151
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
A G A+ALK K+A A+TY GDGG+S+GDF+ +NF+A +AP IF+ +NN +AISTP
Sbjct: 152 QAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTP 211
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRV 182
S Q ++ K A G+ I+VDG DALA+Y A AR+ A+ GEG P LIE +TYR
Sbjct: 212 RSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEG-PTLIETMTYRY 270
Query: 183 GHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 241
G HT + DD T+YR DE W +DP+ RFRK++E+ G WN D E+E+ + I
Sbjct: 271 GPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKA 329
Query: 242 ALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKK 282
A++EA+ EK ++ L +Y+ P NL EQ +E K
Sbjct: 330 AIKEADNTEKQTVTSLMEIMYEDMPQNLAEQYEIYKEKESK 370
>sp|Q5HGZ1|ODPA_STAAC Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain COL) GN=pdhA PE=3 SV=1
Length = 370
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 157/281 (55%), Gaps = 13/281 (4%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
L R+ ++W G + E F + KG Q P N + I Q
Sbjct: 101 LPGYRDVPQIIWHGLPLTE----AFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYI 151
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
A G A+ALK K+A A+TY GDGG+S+GDF+ +NF+A +AP IF+ +NN +AISTP
Sbjct: 152 QAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTP 211
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRV 182
S Q ++ K A G+ I+VDG DALA+Y A AR+ A+ GEG P LIE +TYR
Sbjct: 212 RSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEG-PTLIETMTYRY 270
Query: 183 GHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 241
G HT + DD T+YR DE W +DP+ RFRK++E+ G WN D E+E+ + I
Sbjct: 271 GPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKA 329
Query: 242 ALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKK 282
A++EA+ EK ++ L +Y+ P NL EQ +E K
Sbjct: 330 AIKEADNTEKQTVTSLMEIMYEDMPQNLAEQYEIYKEKESK 370
>sp|Q6GHZ2|ODPA_STAAR Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MRSA252) GN=pdhA PE=3 SV=1
Length = 370
Score = 191 bits (486), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/277 (40%), Positives = 155/277 (55%), Gaps = 13/277 (4%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
L R+ ++W G + E F + KG Q P N + I Q
Sbjct: 101 LPGYRDVPQIIWHGLPLTE----AFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYI 151
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
G A+ALK K+A A+TY GDGG+S+GDF+ +NF+A +AP IF+ +NN +AISTP
Sbjct: 152 QTAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTP 211
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRV 182
S Q ++ K A G+ I+VDG DALA+Y A AR+ A+ GEG P LIE +TYR
Sbjct: 212 RSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEG-PTLIETMTYRY 270
Query: 183 GHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 241
G HT + DD T+YR DE W +DP+ RFRK++E+ G WN D E+E+ + I
Sbjct: 271 GPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKA 329
Query: 242 ALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRE 278
A++EA+ EK ++ L +Y+ P NL EQ +E
Sbjct: 330 AIKEADNTEKQTVTSLMEIMYEDMPQNLAEQYEIYKE 366
>sp|Q8CPN3|ODPA_STAES Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=pdhA PE=3 SV=1
Length = 370
Score = 188 bits (478), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 156/281 (55%), Gaps = 13/281 (4%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
L R+ ++W G + + F + KG Q P N + I Q
Sbjct: 101 LPGYRDVPQIIWHGLPLTD----AFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYI 151
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
G A+ LK K+A A+TY GDGG+S+GDF+ +NF++ +AP IF+ +NN +AISTP
Sbjct: 152 QTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAISTP 211
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRV 182
S Q ++ K + G+ I+VDG DALA+Y A ARE A+ GEG P +IE LTYR
Sbjct: 212 RSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQATLEARERAVAGEG-PTVIETLTYRY 270
Query: 183 GHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 241
G HT + DD T+YR DE W +DP+ RFRK++E+ G WN D E+E+ + +I
Sbjct: 271 GPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKYLEAKGLWNEDKENEVVERAKSEIKA 329
Query: 242 ALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKK 282
A++EA+ EK ++ L +Y+ P NL EQ +E K
Sbjct: 330 AIKEADNTEKQTVTSLMDIMYEEMPQNLAEQYEIYKEKESK 370
>sp|Q5HQ76|ODPA_STAEQ Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=pdhA PE=3
SV=1
Length = 370
Score = 188 bits (478), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 156/281 (55%), Gaps = 13/281 (4%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
L R+ ++W G + + F + KG Q P N + I Q
Sbjct: 101 LPGYRDVPQIIWHGLPLTD----AFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYI 151
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
G A+ LK K+A A+TY GDGG+S+GDF+ +NF++ +AP IF+ +NN +AISTP
Sbjct: 152 QTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAISTP 211
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRV 182
S Q ++ K + G+ I+VDG DALA+Y A ARE A+ GEG P +IE LTYR
Sbjct: 212 RSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQATLEARERAVAGEG-PTVIETLTYRY 270
Query: 183 GHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 241
G HT + DD T+YR DE W +DP+ RFRK++E+ G WN D E+E+ + +I
Sbjct: 271 GPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKYLEAKGLWNEDKENEVVERAKSEIKA 329
Query: 242 ALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKK 282
A++EA+ EK ++ L +Y+ P NL EQ +E K
Sbjct: 330 AIKEADNTEKQTVTSLMDIMYEEMPQNLAEQYEIYKEKESK 370
>sp|P21873|ODPA_GEOSE Pyruvate dehydrogenase E1 component subunit alpha OS=Geobacillus
stearothermophilus GN=pdhA PE=1 SV=2
Length = 369
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 158/278 (56%), Gaps = 15/278 (5%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
L R+ ++W G + Q F + G Q+P N I Q
Sbjct: 100 LPGYRDVPQIIWHGLPL----YQAFLFSRGHFHGNQIP-----EGVNVLPPQIIIGAQYI 150
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
A G A LKM K A A+TY GDGGTS+GDF+ +NF+ +AP IF+ +NN +AISTP
Sbjct: 151 QAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTP 210
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRV 182
+ Q + K A G+ I+VDG D LA+Y+AV AARE AI GEG P LIE L +R
Sbjct: 211 VEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEG-PTLIETLCFRY 269
Query: 183 GHHTTS-DDSTKYRPVD-EIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQIL 240
G HT S DD T+YR + E EW + +DP+ RFRK++E+ G W+ + E+ + +++I
Sbjct: 270 GPHTMSGDDPTRYRSKELENEWAK--KDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIK 327
Query: 241 HALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRE 278
A+++A++ K ++DL + +++ P NL+EQ +E
Sbjct: 328 EAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKE 365
>sp|Q4MTG0|ODPA_BACCE Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus
cereus GN=pdhA PE=1 SV=3
Length = 371
Score = 174 bits (440), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 153/278 (55%), Gaps = 15/278 (5%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
L R+ L+W G + Q F + G QMP N I Q+
Sbjct: 102 LPGYRDVPQLVWHGLPLY----QAFLFSRGHFMGNQMP-----ENVNALAPQIIIGAQII 152
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
G A +K+ K + A+TY GDGG S+GDF+ +NF+ +AP IF+ +NN +AISTP
Sbjct: 153 QTAGVALGMKLRGKKSVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAISTP 212
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRV 182
+ Q + K A G+ I+VDG D LA+Y+A ARE A+ GEG P LIE LT+R
Sbjct: 213 VEKQSAAKTVAQKAVAAGIYGIQVDGMDPLAVYAATAFARERAVNGEG-PTLIETLTFRY 271
Query: 183 GHHTTS-DDSTKYRPVD-EIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQIL 240
G HT + DD T+YR D E EW + +DP+ RFR ++E+ G W+ ++E ++ ++ I
Sbjct: 272 GPHTMAGDDPTRYRTKDIENEWEQ--KDPIVRFRAFLENKGLWSQEVEEKVIEEAKEDIK 329
Query: 241 HALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRE 278
A+ +A++A K ++DL +Y+ P NL EQ +E
Sbjct: 330 QAIAKADQAPKQKVTDLMEIMYEKMPYNLAEQYEIYKE 367
>sp|Q9I1M2|ODBA_PSEAE 2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=bkdA1 PE=3 SV=1
Length = 410
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 151/281 (53%), Gaps = 18/281 (6%)
Query: 8 REPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVG 67
R+ G+L+ R + + + Q N+AD KGRQ+PI Y S + +F++S +ATQ AVG
Sbjct: 134 RQQGILITREYPLVDMICQLLSNEADPLKGRQLPIMYSSKEAGFFSISGNLATQFIQAVG 193
Query: 68 --AAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPIS 125
A A+K D + A A + GDG T+E DFH AL F+ V APVI NN WAIST
Sbjct: 194 WGMASAIKGDTRIASA--WIGDGATAESDFHTALTFAHVYRAPVILNVVNNQWAIST-FQ 250
Query: 126 DQFRSDGAVV--KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 183
+G +G G+ S+RVDGND LA+Y+A A E A P LIE +TYR G
Sbjct: 251 AIAGGEGTTFANRGVGCGIASLRVDGNDFLAVYAASEWAAERARRNLGPSLIEWVTYRAG 310
Query: 184 HHTTSDDSTKYRPVDEIEWWRT--TQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 241
H+TSDD +KYRP D+ W DP+ R ++ + G W+ + ++ ++L
Sbjct: 311 PHSTSDDPSKYRPADD---WTNFPLGDPIARLKRHMIGLGIWSEEQHEATHKALEAEVLA 367
Query: 242 ALQEAEK------AEKPPISDLFTDVYDVSPSNLREQEHSL 276
A ++AE P + +F DVY P +LR Q L
Sbjct: 368 AQKQAESHGTLIDGRVPSAASMFEDVYAELPEHLRRQRQEL 408
>sp|P37940|ODBA_BACSU 2-oxoisovalerate dehydrogenase subunit alpha OS=Bacillus subtilis
(strain 168) GN=bfmBAA PE=1 SV=1
Length = 330
Score = 172 bits (436), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 143/249 (57%), Gaps = 4/249 (1%)
Query: 3 TLSSLREPGVLLWRGFSMQEFANQCFGNKADYGKG-RQMPIHYGSNKHNYFTVSSTIATQ 61
L R+ GV+L G + ++ F AD G RQMP H+G K+ T SS + TQ
Sbjct: 69 VLPYYRDMGVVLAFGMTAKDLMMSGFAKAADPNSGGRQMPGHFGQKKNRIVTGSSPVTTQ 128
Query: 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIS 121
+PHAVG A A +M++KD A FG+G +++GDFH NF+AV + PVIF+C NN +AIS
Sbjct: 129 VPHAVGIALAGRMEKKDIAAFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAIS 188
Query: 122 TPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMA-IGEGRPILIEALTY 180
P Q + + YG+ + V+GND L +Y AV ARE A GEG P LIE ++Y
Sbjct: 189 VPYDKQVACENISDRAIGYGMPGVTVNGNDPLEVYQAVKEARERARRGEG-PTLIETISY 247
Query: 181 RVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQIL 240
R+ H++ DD + YR +E+E + + DP+ ++ +++ G + +IE + + +
Sbjct: 248 RLTPHSSDDDDSSYRGREEVEEAKKS-DPLLTYQAYLKETGLLSDEIEQTMLDEIMAIVN 306
Query: 241 HALQEAEKA 249
A EAE A
Sbjct: 307 EATDEAENA 315
>sp|P21881|ODPA_BACSU Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus
subtilis (strain 168) GN=pdhA PE=1 SV=3
Length = 371
Score = 168 bits (426), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 151/272 (55%), Gaps = 13/272 (4%)
Query: 3 TLSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQL 62
L R+ L+W G + Q F + +G QMP + N + I Q
Sbjct: 101 VLPGYRDVPQLIWHGLPL----YQAFLFSRGHFRGNQMP-----DDVNALSPQIIIGAQY 151
Query: 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIST 122
G A LK K A A+TY GDGG S+GDF+ +NF+ +AP IF+ +NN +AIST
Sbjct: 152 IQTAGVALGLKKRGKKAVAITYTGDGGASQGDFYEGINFAGAYKAPAIFVVQNNRYAIST 211
Query: 123 PISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYR 181
P+ Q ++ K A G+ ++VDG D LA+Y+A ARE AI GEG P LIE LT+R
Sbjct: 212 PVEKQSAAETIAQKAVAAGIVGVQVDGMDPLAVYAATAEARERAINGEG-PTLIETLTFR 270
Query: 182 VGHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQIL 240
G HT + DD TKYR EIE +DP+ RFR ++E+ G W+ + E+++ +++I
Sbjct: 271 YGPHTMAGDDPTKYR-TKEIENEWEQKDPLVRFRAFLENKGLWSEEEEAKVIEDAKEEIK 329
Query: 241 HALQEAEKAEKPPISDLFTDVYDVSPSNLREQ 272
A+++A+ K ++DL +Y+ P NL EQ
Sbjct: 330 QAIKKADAEPKQKVTDLMKIMYEKMPHNLEEQ 361
>sp|P09060|ODBA_PSEPU 2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas putida
GN=bkdA1 PE=1 SV=2
Length = 410
Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 143/279 (51%), Gaps = 10/279 (3%)
Query: 6 SLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHA 65
+ R+ +L+ R S+ E Q N+ D KGRQ+PI Y + +FT+S +ATQ A
Sbjct: 132 TYRQQSILMARDVSLVEMICQLLSNERDPLKGRQLPIMYSVREAGFFTISGNLATQFVQA 191
Query: 66 VGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPIS 125
VG A A + A + GDG T+E DFH AL F+ V APVI NN WAIST
Sbjct: 192 VGWAMASAIKGDTKIASAWIGDGATAESDFHTALTFAHVYRAPVILNVVNNQWAIST-FQ 250
Query: 126 DQFRSDGAVVKGRAY--GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 183
+ GR G+ S+RVDGND +A+Y+A A E A P LIE +TYR G
Sbjct: 251 AIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTYRAG 310
Query: 184 HHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHAL 243
H+TSDD +KYRP D+ + DP+ R ++ + G W+ + + ++ A
Sbjct: 311 PHSTSDDPSKYRPADDWSHF-PLGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQ 369
Query: 244 QEAEK------AEKPPISDLFTDVYDVSPSNLREQEHSL 276
+EAE+ P + +F DVY P +LR Q L
Sbjct: 370 KEAEQYGTLANGHIPSAASMFEDVYKEMPDHLRRQRQEL 408
>sp|O06161|BKDA_MYCTU 3-methyl-2-oxobutanoate dehydrogenase subunit alpha
OS=Mycobacterium tuberculosis GN=bkdA PE=1 SV=1
Length = 367
Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 134/232 (57%), Gaps = 7/232 (3%)
Query: 54 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC 113
+S I TQ HAVGAA A + +D+ V + GDG TSEGD H ALNF+AV P +F
Sbjct: 138 MSVPIGTQTLHAVGAAMAAQRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYV 197
Query: 114 RNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPI 173
+NN WAIS P+S Q + K YG+ IRVDGND LA Y+ + A A P
Sbjct: 198 QNNQWAISMPVSRQTAAPSIAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPT 257
Query: 174 LIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRS 233
LIEA+TYR+G HTT+DD T+YR +E++ W T DP+ R+R +++ G W+ +E ++ +
Sbjct: 258 LIEAVTYRLGPHTTADDPTRYRSQEEVDRW-ATLDPIPRYRTYLQDQGLWSQRLEEQVTA 316
Query: 234 S---VRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKK 282
VR ++ A+ +A + + ++FT VY L+ Q LR + +
Sbjct: 317 RAKHVRSELRDAVFDAPDFD---VDEVFTTVYAEITPGLQAQREQLRAELAR 365
>sp|P52901|ODPA1_ARATH Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Arabidopsis thaliana GN=E1 ALPHA PE=1 SV=2
Length = 389
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 136/259 (52%), Gaps = 3/259 (1%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
+++ R+ + L RG S+ E ++ G +A KG+ +H+ + +++ + Q+P
Sbjct: 113 ITAYRDHCIFLGRGGSLHEVFSELMGRQAGCSKGKGGSMHFYKKESSFYGGHGIVGAQVP 172
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
G A+A K ++++A +GDG ++G ALN SA+ + P I +C NN + + T
Sbjct: 173 LGCGIAFAQKYNKEEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTA 232
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 183
+S +G V ++VDG DA A+ A A++ A+ +G PI++E TYR
Sbjct: 233 EWRAAKSPSYYKRGDY--VPGLKVDGMDAFAVKQACKFAKQHALEKG-PIILEMDTYRYH 289
Query: 184 HHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHAL 243
H+ SD + YR DEI R +DP+ R +K + S+ ++ +RK++ A+
Sbjct: 290 GHSMSDPGSTYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDDAI 349
Query: 244 QEAEKAEKPPISDLFTDVY 262
+A+ P S+LFT+VY
Sbjct: 350 AKAKDCPMPEPSELFTNVY 368
>sp|P26268|ODPT_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type II,
mitochondrial (Fragment) OS=Ascaris suum PE=2 SV=1
Length = 391
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 125/235 (53%), Gaps = 6/235 (2%)
Query: 34 YGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEG 93
YGKG M + YG N++ + + Q P G A+A+K ++ +T FGDG T++G
Sbjct: 138 YGKGGSMHM-YG---ENFYGGNGIVGAQQPLGTGIAFAMKYKKQKNVCITLFGDGATNQG 193
Query: 94 DFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDAL 153
+ ++N + + E PV+++C NNG+ + T + S +G V VDG D L
Sbjct: 194 QLYESMNMAKLWELPVLYVCENNGYGMGTSAARSSASTDYYTRGDY--VPGFWVDGMDVL 251
Query: 154 AIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRF 213
A+ A+ +E P++IE TYR G H+ SD T YR +EI+ R T+DP+T F
Sbjct: 252 AVRQAIRWGKEWCNAGKGPLMIEMATYRYGGHSMSDPGTSYRTREEIQEVRKTRDPITGF 311
Query: 214 RKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSN 268
+ I + G D E+ +RK++ A+++A ++ P+ L TD+Y +P+
Sbjct: 312 KDKIVTAGLVTEDELKEVDKEIRKEVDAAVKQAHTDKEAPVEMLLTDIYYNTPAQ 366
>sp|P35485|ODPA_ACHLA Pyruvate dehydrogenase E1 component subunit alpha (Fragment)
OS=Acholeplasma laidlawii GN=pdhA PE=4 SV=1
Length = 345
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 136/267 (50%), Gaps = 12/267 (4%)
Query: 8 REPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVG 67
RE LL+RG ++ +GN+ K + I + I +Q A G
Sbjct: 77 RELNTLLYRGDKLENVFLYWYGNERGSIKPEGVKI---------LPTNIIIGSQSNIAAG 127
Query: 68 AAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQ 127
A A K+ + + GDGGT+ G+F+ LNF+A +APV+ + +NN WAISTP+
Sbjct: 128 LAMASKIRKTNEVTAFTIGDGGTAHGEFYEGLNFAASFKAPVVAVIQNNQWAISTPVRKA 187
Query: 128 FRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTT 187
S+ KG A+G+ I+VDGND LA+Y A A + A P LIEA TYR+G HTT
Sbjct: 188 SNSETLAQKGVAFGIPYIQVDGNDMLAMYVASKEAMDRARKGDGPTLIEAFTYRMGPHTT 247
Query: 188 SDD-STKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEA 246
SDD + YR +E W +D + RF+ ++ + G+W+ + + +L V +I ++
Sbjct: 248 SDDPCSIYRTKEEENEW-AKKDQIARFKTYLINKGYWSEEEDKKLEEEVLAEINDTFKKV 306
Query: 247 EK-AEKPPISDLFTDVYDVSPSNLREQ 272
E + ++F Y L+EQ
Sbjct: 307 ESYGANVELIEIFEHTYAEMTPQLKEQ 333
>sp|P26267|ODPA_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type I,
mitochondrial OS=Ascaris suum PE=1 SV=1
Length = 396
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 130/249 (52%), Gaps = 8/249 (3%)
Query: 20 MQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDA 79
+ E + GN YGKG M + YG N++ + + Q P G A+A+K ++
Sbjct: 131 LCELTGRITGNV--YGKGGSMHM-YG---ENFYGGNGIVGAQQPLGTGIAFAMKYRKEKN 184
Query: 80 CAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRA 139
+T FGDG T++G ++N + + + PV+++C NNG+ + T + S +G
Sbjct: 185 VCITMFGDGATNQGQLFESMNMAKLWDLPVLYVCENNGYGMGTAAARSSASTDYYTRGDY 244
Query: 140 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDE 199
V I VDG D LA+ AV A+E P++IE TYR H+ SD T YR +E
Sbjct: 245 --VPGIWVDGMDVLAVRQAVRWAKEWCNAGKGPLMIEMATYRYSGHSMSDPGTSYRTREE 302
Query: 200 IEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFT 259
++ R T+DP+T F+ I + G D E+ VRK+I A+++A ++ P+ + T
Sbjct: 303 VQEVRKTRDPITGFKDKIVTAGLVTEDEIKEIDKQVRKEIDAAVKQAHTDKESPVELMLT 362
Query: 260 DVYDVSPSN 268
D+Y +P+
Sbjct: 363 DIYYNTPAQ 371
>sp|P47516|ODPA_MYCGE Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=pdhA PE=3 SV=1
Length = 358
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 10/276 (3%)
Query: 6 SLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHA 65
+ R ++L+RG ++ GN+ KG Q+ Y + ++ TI Q HA
Sbjct: 92 TFRSGALMLYRGVKPEQLLLYWNGNE----KGSQIDAKYKT-----LPINITIGAQYSHA 142
Query: 66 VGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPIS 125
G Y L ++ AVT GDGGT+EG+F+ A+N +++ + +F NN +AIST
Sbjct: 143 AGLGYMLHYKKQPNVAVTMIGDGGTAEGEFYEAMNIASIHKWNTVFCINNNQFAISTRTK 202
Query: 126 DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHH 185
+ VK A G+ +RVDGND +A Y A+ A A G P+LIE +YR G H
Sbjct: 203 LESAVSDLSVKAIACGIPRVRVDGNDLIASYEAMQDAANYARGGNGPVLIEFFSYRQGPH 262
Query: 186 TTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQE 245
TTSDD + YR E E + DPV R R ++ N E E+ S + ++I A ++
Sbjct: 263 TTSDDPSIYRTKQEEEEGMKS-DPVKRLRNFLFDRSILNQAQEEEMFSKIEQEIQAAYEK 321
Query: 246 AEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIK 281
+ ++F Y L EQ+ ++ K
Sbjct: 322 MVLDTPVSVDEVFDYNYQELTPELVEQKQIAKKYFK 357
>sp|Q8H1Y0|ODPA2_ARATH Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial
OS=Arabidopsis thaliana GN=IAR4 PE=1 SV=2
Length = 393
Score = 134 bits (336), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 132/259 (50%), Gaps = 3/259 (1%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
++S R+ + RG + + ++ G K G+ +H+ +++ + Q+P
Sbjct: 117 ITSYRDHCTFIGRGGKLVDAFSELMGRKTGCSHGKGGSMHFYKKDASFYGGHGIVGAQIP 176
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
G A+A K ++ +A +GDG ++G ALN SA+ + P I +C NN + + T
Sbjct: 177 LGCGLAFAQKYNKDEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTA 236
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 183
+S +G V ++VDG DALA+ A A+E A+ G PI++E TYR
Sbjct: 237 TWRSAKSPAYFKRGDY--VPGLKVDGMDALAVKQACKFAKEHALKNG-PIILEMDTYRYH 293
Query: 184 HHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHAL 243
H+ SD + YR DEI R +DP+ R RK + ++ ++ +RK++ A+
Sbjct: 294 GHSMSDPGSTYRTRDEISGVRQVRDPIERVRKLLLTHDIATEKELKDMEKEIRKEVDDAV 353
Query: 244 QEAEKAEKPPISDLFTDVY 262
+A+++ P S+LFT++Y
Sbjct: 354 AQAKESPIPDASELFTNMY 372
>sp|Q6Z5N4|ODPA1_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os02g0739600 PE=2
SV=1
Length = 390
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 131/261 (50%), Gaps = 3/261 (1%)
Query: 2 TTLSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQ 61
+ +++ R+ L RG + + G +A +G+ +H+ N++ + Q
Sbjct: 112 SIITAYRDHCTYLARGGDLVSAFAELMGRQAGCSRGKGGSMHFYKKDANFYGGHGIVGAQ 171
Query: 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIS 121
+P G A+A K +++ +GDG ++G ALN SA+ + P I +C NN + +
Sbjct: 172 VPLGCGLAFAQKYRKEETATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMG 231
Query: 122 TPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 181
T +S +G V ++VDG D LA+ A A+E AI G PI++E TYR
Sbjct: 232 TAEWRAAKSPAYYKRGDY--VPGLKVDGMDVLAVKQACKFAKEHAIANG-PIVLEMDTYR 288
Query: 182 VGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 241
H+ SD + YR DEI R +DP+ R RK I ++ ++ +RK++
Sbjct: 289 YHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLILAHDLATAAELKDMEKEIRKEVDD 348
Query: 242 ALQEAEKAEKPPISDLFTDVY 262
A+ +A+++ P S+LFT+VY
Sbjct: 349 AIAKAKESPMPDTSELFTNVY 369
>sp|P52902|ODPA_PEA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Pisum sativum PE=2 SV=1
Length = 397
Score = 130 bits (328), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 133/264 (50%), Gaps = 13/264 (4%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
+++ R+ L RG ++ + G + KG+ +H+ ++ + Q+P
Sbjct: 121 ITAYRDHCTFLGRGGTLLRVYAELMGRRDGCSKGKGGSMHFYKKDSGFYGGHGIVGAQVP 180
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
G A+ K + ++ +GDG ++G ALN SA+ + P I +C NN + + T
Sbjct: 181 LGCGLAFGQKYLKDESVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTA 240
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 183
+S +G V ++VDG DALA+ A A+E A+ G PI++E TYR
Sbjct: 241 TWRSAKSPAYFKRGDY--VPGLKVDGMDALAVKQACKFAKEHALKNG-PIILEMDTYRYH 297
Query: 184 HHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDI--ESELRSS---VRKQ 238
H+ SD + YR DEI R +DP+ R RK + S+ DI E EL+ + VRK+
Sbjct: 298 GHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLSH-----DIATEKELKDTEKEVRKE 352
Query: 239 ILHALQEAEKAEKPPISDLFTDVY 262
+ A+ +A+ + P SDLF++VY
Sbjct: 353 VDEAIAKAKDSPMPDPSDLFSNVY 376
>sp|Q654V6|ODPA2_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os06g0246500 PE=2
SV=1
Length = 398
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 130/259 (50%), Gaps = 3/259 (1%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
+++ R+ L RG + + G + +G+ +H N++ + Q+P
Sbjct: 122 ITAYRDHCAYLARGGDLAALFAELMGRRGGCSRGKGGSMHLYKKDANFYGGHGIVGAQVP 181
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
G A+A + ++ A +GDG ++G ALN +A+ + PV+ +C NN + + T
Sbjct: 182 LGCGLAFAQRYRKEAAVTFDLYGDGAANQGQLFEALNMAALWKLPVVLVCENNHYGMGT- 240
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 183
++ S R V ++VDG D LA+ A A++ A+ G PI++E TYR
Sbjct: 241 -AEWRASKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKQHALENG-PIILEMDTYRYH 298
Query: 184 HHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHAL 243
H+ SD + YR DEI R +DP+ R RK + ++ + ++ +RKQ+ A+
Sbjct: 299 GHSMSDPGSTYRTRDEIAGIRQERDPIERVRKLLLAHDFATTQELKDMEKEIRKQVDTAI 358
Query: 244 QEAEKAEKPPISDLFTDVY 262
+A+++ P S+LFT+VY
Sbjct: 359 AKAKESPMPDPSELFTNVY 377
>sp|P52903|ODPA_SOLTU Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Solanum tuberosum PE=1 SV=1
Length = 391
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 133/262 (50%), Gaps = 9/262 (3%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
+++ R+ + L RG ++ E + G + +G+ +H+ + ++ + Q+P
Sbjct: 115 ITAYRDHCIFLGRGGTLVEAFAELMGRRDGCSRGKGGSMHFYKKESGFYGGHGIVGAQVP 174
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
+G A+A K ++D +GDG ++G ALN +A+ + P I +C NN + + T
Sbjct: 175 LGIGLAFAQKYKKEDYVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTA 234
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 183
+S +G V +RVDG D A+ A A++ A+ G PI++E TYR
Sbjct: 235 EWRAAKSPAYYKRGDY--VPGLRVDGMDVFAVKQACTFAKQHALKNG-PIILEMDTYRYH 291
Query: 184 HHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELR---SSVRKQIL 240
H+ SD + YR DEI R +DPV R R I ++ N E+EL+ RK +
Sbjct: 292 GHSMSDPGSTYRTRDEISGVRQERDPVERIRSLILAH---NIATEAELKDIEKENRKVVD 348
Query: 241 HALQEAEKAEKPPISDLFTDVY 262
A+ +A+++ P S+LFT+VY
Sbjct: 349 EAIAKAKESPMPDPSELFTNVY 370
>sp|O66112|ODPA_ZYMMO Pyruvate dehydrogenase E1 component subunit alpha OS=Zymomonas
mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
GN=pdhA PE=3 SV=1
Length = 354
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 2/260 (0%)
Query: 2 TTLSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQ 61
+ ++ RE G +L G + + G + G+ +H S +H +F + + Q
Sbjct: 92 SVITGYREHGHMLAYGIDPKIVMAELTGRASGISHGKGGSMHMFSTEHKFFGGNGIVGAQ 151
Query: 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIS 121
+P G A+A K C+ YFGDG ++G + A N +A+ + PVIF+ NNG+A+
Sbjct: 152 VPLGAGLAFAHKYRNDGGCSAAYFGDGSANQGQVYEAYNMAALWKLPVIFVIENNGYAMG 211
Query: 122 TPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 181
T I +G +G+ ++ VDG D L + A A + PI++E TYR
Sbjct: 212 TSIQRANAHTALSERGAGFGIPALVVDGMDVLEVRGAATVAVDWVQAGKGPIILEMKTYR 271
Query: 182 VGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 241
H+ SD + +YR +E+ + DP+ +K + + G ++ +L +R+Q+
Sbjct: 272 YRGHSMSDPA-RYRSREEVNDMKENHDPLDNLKKDLFAAGVPEAEL-VKLDEDIRQQVKE 329
Query: 242 ALQEAEKAEKPPISDLFTDV 261
A AEKA P +L+T++
Sbjct: 330 AADFAEKAPLPADEELYTNI 349
>sp|P75390|ODPA_MYCPN Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=pdhA PE=3 SV=1
Length = 358
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 130/276 (47%), Gaps = 10/276 (3%)
Query: 6 SLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHA 65
+ R ++L+RG ++ GN+ G ++ Y + ++ TI Q HA
Sbjct: 92 TFRSGALMLYRGVKPEQLLLYWNGNE----NGSKIEAKYKT-----LPINITIGAQYSHA 142
Query: 66 VGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPIS 125
G Y L + AVT GDGGT+EG+F+ A+N +++ + +F NN +AIST
Sbjct: 143 AGLGYMLHYKKLPNVAVTMIGDGGTAEGEFYEAMNIASIHKWNSVFCINNNQFAISTRTK 202
Query: 126 DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHH 185
+ K A + IRVDGND +A Y A+H A A P+LIE ++R G H
Sbjct: 203 LESAVSDLSTKAIAVNIPRIRVDGNDLIASYEAMHEAANYARSGNGPVLIEFFSWRQGPH 262
Query: 186 TTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQE 245
TTSDD + YR +E E DPV R R ++ G E E+ + + +++ A +
Sbjct: 263 TTSDDPSIYRTKEE-EAEAMKSDPVKRLRNFLFDRGILTPQQEEEMVAKIEQEVQAAYEV 321
Query: 246 AEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIK 281
+ ++F Y+ +L Q+ ++ K
Sbjct: 322 MVSKTPVTLDEVFDYNYEKLTPDLARQKAEAKKYFK 357
>sp|P16387|ODPA_YEAST Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PDA1 PE=1 SV=2
Length = 420
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 132/272 (48%), Gaps = 24/272 (8%)
Query: 2 TTLSSLREPGVLLWRGFSMQEFANQCFGNKA--DYGKGRQM----PIHYGSNKHNYFTVS 55
+ ++S R G RG S++ + G +A YGKG M P YG N
Sbjct: 133 SIITSYRCHGFTFMRGASVKAVLAELMGRRAGVSYGKGGSMHLYAPGFYGGN-------- 184
Query: 56 STIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRN 115
+ Q+P G A+A + +DAC+ T +GDG +++G + N + + PV+F C N
Sbjct: 185 GIVGAQVPLGAGLAFAHQYKNEDACSFTLYGDGASNQGQVFESFNMAKLWNLPVVFCCEN 244
Query: 116 NGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILI 175
N + + T S +G+ + ++V+G D LA+Y A A++ + P+++
Sbjct: 245 NKYGMGTAASRSSAMTEYFKRGQY--IPGLKVNGMDILAVYQASKFAKDWCLSGKGPLVL 302
Query: 176 EALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRS-- 233
E TYR G H+ SD T YR DEI+ R+ DP+ + + G E+E+++
Sbjct: 303 EYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLIDLGIAT---EAEVKAYD 359
Query: 234 -SVRKQILHALQEAEKAEKP--PISDLFTDVY 262
S RK + ++ A+ A P +S LF DVY
Sbjct: 360 KSARKYVDEQVELADAAPPPEAKLSILFEDVY 391
>sp|P52900|ODPA_SMIMA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
(Fragment) OS=Sminthopsis macroura GN=PDHA PE=2 SV=1
Length = 363
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 122/264 (46%), Gaps = 4/264 (1%)
Query: 3 TLSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQL 62
+++ R G RG ++E + G + KG+ +H + N++ + + Q+
Sbjct: 87 VITAYRAHGFTYTRGLPVREILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQV 144
Query: 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIST 122
P VG A A K + KD +T +GDG ++G A N +A+ + P IFIC NN + + T
Sbjct: 145 PLGVGIALACKYNEKDEICLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGT 204
Query: 123 PISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 182
+ S +G + I VDG D L + A A P+L+E TYR
Sbjct: 205 SVERAAASTDYYKRGDF--IPGIMVDGMDVLCVREATKFAAAYCRSGKGPMLMELQTYRY 262
Query: 183 GHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHA 242
H+ SD YR +EI+ R+ DP+ + + +N + + E+ VRK+I A
Sbjct: 263 HGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNNNLASIEELKEIDVEVRKEIEDA 322
Query: 243 LQEAEKAEKPPISDLFTDVYDVSP 266
Q A +PP+ +L +Y P
Sbjct: 323 AQFATADPEPPLEELGYHIYSRDP 346
>sp|A7MB35|ODPA_BOVIN Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Bos taurus GN=PDHA1 PE=2 SV=1
Length = 390
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 123/263 (46%), Gaps = 4/263 (1%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
+++ R G RG S++E + G + KG+ +H + N++ + + Q+P
Sbjct: 115 ITAYRAHGFTFTRGLSVREILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVP 172
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
G A A K + KD +T +GDG ++G A N +A+ + P IFIC NN + + T
Sbjct: 173 LGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTS 232
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 183
+ S +G + +RVDG D L + A A PIL+E TYR
Sbjct: 233 VERAAASTDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYH 290
Query: 184 HHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHAL 243
H+ SD YR +EI+ R+ DP+ + + ++ + + E+ VRK+I A
Sbjct: 291 GHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAA 350
Query: 244 QEAEKAEKPPISDLFTDVYDVSP 266
Q A +PP+ +L +Y P
Sbjct: 351 QFATADPEPPLEELGYHIYCNDP 373
>sp|Q9R9N5|ODPA_RHIME Pyruvate dehydrogenase E1 component subunit alpha OS=Rhizobium
meliloti (strain 1021) GN=pdhA PE=3 SV=1
Length = 348
Score = 121 bits (303), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 129/259 (49%), Gaps = 1/259 (0%)
Query: 3 TLSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQL 62
++ R+ G +L G S + + G + KG+ +H S + +++ + Q+
Sbjct: 89 VITGYRDHGHMLACGMSARGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQV 148
Query: 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIST 122
G A+A + D ++ YFGDG ++G + + N +A+ + PVI+I NN +A+ T
Sbjct: 149 SLGTGLAFANRYRGNDNVSLAYFGDGAANQGQVYESFNMAALWKLPVIYIVENNRYAMGT 208
Query: 123 PISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 182
+S +G ++G+ +VDG D A+ +A A E PI++E LTYR
Sbjct: 209 SVSRASAQTDFSQRGASFGIPGYQVDGMDVRAVKAAADEAVEHCRSGKGPIILEMLTYRY 268
Query: 183 GHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHA 242
H+ SD + KYR DE++ R+ DP+ + + + GW D ++ VR + +
Sbjct: 269 RGHSMSDPA-KYRSKDEVQKMRSEHDPIEQVKARLTDKGWATEDELKQIDKEVRDIVADS 327
Query: 243 LQEAEKAEKPPISDLFTDV 261
A+ +P +S+L+TD+
Sbjct: 328 ADFAQSDPEPDVSELYTDI 346
>sp|O31404|ACOA_BACSU Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
OS=Bacillus subtilis (strain 168) GN=acoA PE=2 SV=2
Length = 333
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 117/260 (45%), Gaps = 7/260 (2%)
Query: 5 SSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPH 64
S+ R G + +G + + FG KG+ +H + +
Sbjct: 71 STHRGHGHCIAKGCDLDGMMAEIFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFTL 130
Query: 65 AVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI 124
A G+A K + +V +FGDG ++G FH LN +AV PV+F+ NNG+ +TP
Sbjct: 131 ACGSALTAKYKQTKNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFVAENNGYGEATPF 190
Query: 125 SDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGH 184
D + AY + + VDG D LA+Y A A E A G P LIE +TYR
Sbjct: 191 EYASACDSIADRAAAYNMPGVTVDGKDILAVYQAAEEAIERARNGGGPSLIECMTYRNYG 250
Query: 185 HTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWI--ESNGWWNGDIESELRSSVRKQILHA 242
H D T Y+ DE +D + F+ ++ E++ DIE + S+ K A
Sbjct: 251 HFEGDAQT-YKTKDERVEHLEEKDAIQGFKNYLLKETDANKLSDIEQRVSESIEK----A 305
Query: 243 LQEAEKAEKPPISDLFTDVY 262
+ +E + P S+L TDVY
Sbjct: 306 VSFSEDSPYPKDSELLTDVY 325
>sp|Q54C70|ODPA_DICDI Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=pdhA PE=1 SV=1
Length = 377
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 125/259 (48%), Gaps = 4/259 (1%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
+++ R+ +L RG + +E + + KG+ +H + N++ + + Q P
Sbjct: 106 ITAYRDHTYMLSRGATPEEIFAELLMKETGCSKGKGGSMHMFTK--NFYGGNGIVGAQCP 163
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
G A+A K ++ + +GDG ++G A N +++ + PVIFIC NN + + T
Sbjct: 164 LGAGIAFAQKYNKTGNVCLAMYGDGAANQGQLFEAFNMASLWKLPVIFICENNKYGMGT- 222
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 183
S + + G R + V ++VDG D A+ A A E PI++E TYR
Sbjct: 223 -SQKRSTAGHDFYTRGHYVAGLKVDGMDVFAVKEAGKYAAEWCRAGNGPIILEMDTYRYV 281
Query: 184 HHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHAL 243
H+ SD YR +E+ R T+DP+ R+ I N D + + +VR ++ A
Sbjct: 282 GHSMSDPGITYRTREEVNHVRQTRDPIENIRQIILDNKIATEDQLAAIEETVRDEMEKAS 341
Query: 244 QEAEKAEKPPISDLFTDVY 262
++A A P +LFT+VY
Sbjct: 342 EKAIAAPLPQARELFTNVY 360
>sp|P35486|ODPA_MOUSE Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Mus musculus GN=Pdha1 PE=1 SV=1
Length = 390
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 121/263 (46%), Gaps = 4/263 (1%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
+++ R G RG ++ + G + KG+ +H + N++ + + Q+P
Sbjct: 115 ITAYRAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVP 172
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
G A A K + KD +T +GDG ++G A N +A+ + P IFIC NN + + T
Sbjct: 173 LGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTS 232
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 183
+ S +G + +RVDG D L + A A PIL+E TYR
Sbjct: 233 VERAAASTDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYH 290
Query: 184 HHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHAL 243
H+ SD YR +EI+ R+ DP+ + + ++ + + E+ VRK+I A
Sbjct: 291 GHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAA 350
Query: 244 QEAEKAEKPPISDLFTDVYDVSP 266
Q A +PP+ +L +Y P
Sbjct: 351 QFATADPEPPLEELGYHIYSSDP 373
>sp|O13366|ODPA_KLULA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PDA1 PE=3
SV=2
Length = 412
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 30/275 (10%)
Query: 2 TTLSSLREPGVLLWRGFSMQEFANQCFGNK--ADYGKGRQM----PIHYGSNKHNYFTVS 55
T ++S R G RG ++Q + G + +GKG M P YG N
Sbjct: 125 TVITSYRCHGFTYMRGAAVQAVLAELMGRRTGVSFGKGGSMHLYAPGFYGGN-------- 176
Query: 56 STIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRN 115
+ Q+P G A+A + +DAC+ +GDG +++G + N + + P +F C N
Sbjct: 177 GIVGAQVPLGAGLAFAHQYKHEDACSFALYGDGASNQGQVFESFNMAKLWNLPAVFCCEN 236
Query: 116 NGWAI------STPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGE 169
N + + S+ +++ F+ R + ++V+G D LA+Y A A++ +
Sbjct: 237 NKYGMGTAAARSSAMTEYFK--------RGQYIPGLKVNGMDILAVYQASKFAKDWTVSG 288
Query: 170 GRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIES 229
PI++E TYR G H+ SD T YR DEI+ R+ DP+ + + G D
Sbjct: 289 NGPIVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLLELGIATEDEIK 348
Query: 230 ELRSSVRKQILHALQEAEKAEKP--PISDLFTDVY 262
+ RK + ++ A+ A P +S LF DVY
Sbjct: 349 AYDKAARKYVDEQVELADAAPAPEAKMSILFEDVY 383
>sp|P26284|ODPA_RAT Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Rattus norvegicus GN=Pdha1 PE=1 SV=2
Length = 390
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 122/263 (46%), Gaps = 4/263 (1%)
Query: 4 LSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLP 63
+++ R G RG +++ + G + KG+ +H + N++ + + Q+P
Sbjct: 115 ITAYRAHGFTFNRGHAVRAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVP 172
Query: 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP 123
G A A K + KD +T +GDG ++G A N +A+ + P IFIC NN + + T
Sbjct: 173 LGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTS 232
Query: 124 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 183
+ S +G + +RVDG D L + A A PIL+E TYR
Sbjct: 233 VERAAASTDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYH 290
Query: 184 HHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHAL 243
H+ SD YR +EI+ R+ DP+ + + ++ + + E+ VRK+I A
Sbjct: 291 GHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAA 350
Query: 244 QEAEKAEKPPISDLFTDVYDVSP 266
Q A +PP+ +L +Y P
Sbjct: 351 QFATADPEPPLEELGYHIYSSDP 373
>sp|Q10489|ODPA_SCHPO Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pda1 PE=1 SV=1
Length = 409
Score = 117 bits (293), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 126/263 (47%), Gaps = 6/263 (2%)
Query: 2 TTLSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQ 61
+ ++S R G RG S++ + G + KG+ +H + N++ + + Q
Sbjct: 130 SIITSYRCHGFAYTRGLSIRSIIGELMGRQCGASKGKGGSMHIFAK--NFYGGNGIVGAQ 187
Query: 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIS 121
+P G +A K K +GDG +++G A N + + PVIF C NN + +
Sbjct: 188 IPLGAGIGFAQKYLEKPTTTFALYGDGASNQGQAFEAFNMAKLWGLPVIFACENNKYGMG 247
Query: 122 TPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 181
T S + S R + + V+G D LA+ A A++ + +P+L+E +TYR
Sbjct: 248 T--SAERSSAMTEFYKRGQYIPGLLVNGMDVLAVLQASKFAKKYTVENSQPLLMEFVTYR 305
Query: 182 VGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 241
G H+ SD T YR +E++ R +DP+ +K I G N + + +R +
Sbjct: 306 YGGHSMSDPGTTYRSREEVQKVRAARDPIEGLKKHIMEWGVANANELKNIEKRIRGMVDE 365
Query: 242 ALQEAEKAEKP-PISD-LFTDVY 262
++ AE++ P PI + LF+DVY
Sbjct: 366 EVRIAEESPFPDPIEESLFSDVY 388
>sp|P51267|ODPA_PORPU Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra
purpurea GN=pdhA PE=3 SV=1
Length = 344
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 119/251 (47%), Gaps = 9/251 (3%)
Query: 14 LWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAY--- 70
L +G Q + FG + +GR +H S HN+ + IA +P A GAA+
Sbjct: 88 LSKGVPSQNVMAELFGKETGCSRGRGGSMHIFSAPHNFLGGFAFIAEGIPVATGAAFQSI 147
Query: 71 ----ALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISD 126
LK + +FGDG T+ G F LN + + + P+IF+ NN WAI
Sbjct: 148 YRQQVLKEPGELRVTACFFGDGTTNNGQFFECLNMAVLWKLPIIFVVENNQWAIGMAHHR 207
Query: 127 QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHT 186
K A+G+ I VDG D LA+ A E A P LIEALTYR H+
Sbjct: 208 SSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQVAEKAVERARQGQGPTLIEALTYRFRGHS 267
Query: 187 TSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEA 246
+D + R E E W +DP+ + +K I N + D ++++SSV+ + +++ A
Sbjct: 268 LADPD-ELRSRQEKEAW-VARDPIKKLKKHILDNQIASSDELNDIQSSVKIDLEQSVEFA 325
Query: 247 EKAEKPPISDL 257
+ +P IS+L
Sbjct: 326 MSSPEPNISEL 336
>sp|Q1XDM0|ODPA_PORYE Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra
yezoensis GN=pdhA PE=3 SV=1
Length = 346
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 120/251 (47%), Gaps = 9/251 (3%)
Query: 14 LWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAY--- 70
L +G + + FG + KGR +H S HN+ + IA +P A GAA+
Sbjct: 90 LSKGVPSKNVMAELFGKETGCSKGRGGSMHIFSAPHNFLGGFAFIAEGIPVATGAAFQSI 149
Query: 71 ----ALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISD 126
LK +FGDG T+ G F LN + + + P+IF+ NN WAI
Sbjct: 150 YRQQVLKETEDLRVTACFFGDGTTNNGQFFECLNMAVLWKLPIIFVVENNQWAIGMAHHR 209
Query: 127 QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHT 186
K A+G+ I VDG D LA+ A A + A P LIEALTYR H+
Sbjct: 210 SSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQAAKQAVQRARQGDGPTLIEALTYRFRGHS 269
Query: 187 TSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEA 246
+D + R E E W +DP+ + +K+I N N +E++++V+ ++ A++ A
Sbjct: 270 LADPD-ELRSRQEKEAW-VARDPIKKLKKYILDNEIANIGELNEIQNAVKTELEQAVKFA 327
Query: 247 EKAEKPPISDL 257
+ +P +S+L
Sbjct: 328 ISSPEPNMSEL 338
>sp|P52899|ODPA_CAEEL Probable pyruvate dehydrogenase E1 component subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=T05H10.6 PE=2
SV=1
Length = 397
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 121/254 (47%), Gaps = 18/254 (7%)
Query: 20 MQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDA 79
+ E + GN +GKG M ++ N++ + + Q P G A A+K +
Sbjct: 129 LAELTGRVAGNV--HGKGGSMHMY----TKNFYGGNGIVGAQQPLGAGVALAMKYREQKN 182
Query: 80 CAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIST-----PISDQFRSDGAV 134
VT +GDG ++G A N + + + PV+F+C NNG+ + T S ++ + G
Sbjct: 183 VCVTLYGDGAANQGQLFEATNMAKLWDLPVLFVCENNGFGMGTTAERSSASTEYYTRGDY 242
Query: 135 VKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKY 194
V G I VDG D LA+ A A+E P+++E TYR H+ SD T Y
Sbjct: 243 VPG-------IWVDGMDILAVREATKWAKEYCDSGKGPLMMEMATYRYHGHSMSDPGTSY 295
Query: 195 RPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPI 254
R +EI+ R T+DP+T F+ I ++ + + VRK++ AL+ A P
Sbjct: 296 RTREEIQEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKEVDEALKIATSDGVLPP 355
Query: 255 SDLFTDVYDVSPSN 268
L+ D+Y +P+
Sbjct: 356 EALYADIYHNTPAQ 369
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,987,307
Number of Sequences: 539616
Number of extensions: 4763405
Number of successful extensions: 13544
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 162
Number of HSP's that attempted gapping in prelim test: 13219
Number of HSP's gapped (non-prelim): 390
length of query: 293
length of database: 191,569,459
effective HSP length: 116
effective length of query: 177
effective length of database: 128,974,003
effective search space: 22828398531
effective search space used: 22828398531
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)