Query 022717
Match_columns 293
No_of_seqs 245 out of 2302
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 10:01:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022717.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022717hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bfd_A 2-oxoisovalerate dehydr 100.0 1.5E-66 5.2E-71 496.7 29.1 291 2-292 108-398 (400)
2 1qs0_A 2-oxoisovalerate dehydr 100.0 7.9E-66 2.7E-70 492.1 29.4 273 2-275 127-406 (407)
3 1w85_A Pyruvate dehydrogenase 100.0 6.7E-64 2.3E-68 473.7 29.7 269 2-280 97-366 (368)
4 1umd_A E1-alpha, 2-OXO acid de 100.0 2.2E-63 7.7E-68 470.5 31.1 277 2-279 90-366 (367)
5 2ozl_A PDHE1-A type I, pyruvat 100.0 1.8E-63 6.1E-68 470.0 29.9 262 2-267 88-349 (365)
6 2yic_A 2-oxoglutarate decarbox 100.0 4.5E-53 1.5E-57 434.8 20.6 289 2-292 174-500 (868)
7 2xt6_A 2-oxoglutarate decarbox 100.0 2.8E-52 9.6E-57 438.1 20.8 289 2-292 419-745 (1113)
8 2jgd_A 2-oxoglutarate dehydrog 100.0 3.3E-51 1.1E-55 423.2 20.6 289 2-291 254-572 (933)
9 1gpu_A Transketolase; transfer 100.0 3E-30 1E-34 261.0 22.3 189 10-210 75-281 (680)
10 2e6k_A Transketolase; structur 100.0 8.3E-31 2.8E-35 264.0 15.2 192 6-211 69-282 (651)
11 1r9j_A Transketolase; domains, 100.0 4.7E-29 1.6E-33 251.9 24.0 183 12-205 76-277 (673)
12 3rim_A Transketolase, TK; TPP, 100.0 6.7E-29 2.3E-33 250.7 23.1 175 5-190 83-278 (700)
13 3mos_A Transketolase, TK; thia 100.0 2.2E-28 7.4E-33 244.9 20.1 168 12-192 83-253 (616)
14 2r8o_A Transketolase 1, TK 1; 100.0 5.3E-28 1.8E-32 244.3 19.1 165 37-205 94-275 (669)
15 1itz_A Transketolase; calvin c 100.0 1.8E-27 6.3E-32 240.4 20.6 164 37-204 107-288 (675)
16 3uk1_A Transketolase; structur 100.0 1.2E-27 4.2E-32 242.1 18.5 171 13-195 116-301 (711)
17 3m49_A Transketolase; alpha-be 100.0 1.4E-26 4.6E-31 233.9 24.7 182 11-203 99-299 (690)
18 3kom_A Transketolase; rossmann 99.9 2.5E-26 8.6E-31 231.3 25.7 186 6-202 67-274 (663)
19 3l84_A Transketolase; TKT, str 99.9 2.8E-26 9.5E-31 229.7 24.4 174 6-191 66-252 (632)
20 2o1s_A 1-deoxy-D-xylulose-5-ph 99.9 1.6E-26 5.4E-31 231.8 17.7 171 5-188 78-291 (621)
21 2o1x_A 1-deoxy-D-xylulose-5-ph 99.9 3.1E-26 1.1E-30 230.0 11.2 132 51-186 118-294 (629)
22 4feg_A Pyruvate oxidase; carba 99.9 1.7E-25 5.9E-30 223.6 12.3 168 49-227 411-596 (603)
23 2qtc_A Pyruvate dehydrogenase 99.9 1.7E-24 5.9E-29 223.2 16.6 193 5-204 140-421 (886)
24 1v5e_A Pyruvate oxidase; oxido 99.7 6.4E-18 2.2E-22 168.4 12.2 157 18-183 364-541 (590)
25 2pan_A Glyoxylate carboligase; 99.7 6E-18 2E-22 169.3 9.2 121 55-183 441-582 (616)
26 3ahc_A Phosphoketolase, xylulo 99.7 2.6E-17 8.8E-22 167.8 13.2 140 40-183 159-322 (845)
27 2uz1_A Benzaldehyde lyase; thi 99.7 1.2E-17 4.1E-22 165.4 9.6 155 17-181 369-546 (563)
28 2pgn_A Cyclohexane-1,2-dione h 99.7 1.5E-17 5E-22 165.7 9.3 154 18-183 375-549 (589)
29 1q6z_A BFD, BFDC, benzoylforma 99.7 1.3E-17 4.6E-22 163.8 8.2 152 18-181 353-525 (528)
30 1ozh_A ALS, acetolactate synth 99.7 1.6E-17 5.3E-22 164.8 8.7 153 18-182 371-544 (566)
31 2iht_A Carboxyethylarginine sy 99.7 1.9E-17 6.4E-22 164.4 9.2 121 49-181 427-561 (573)
32 3eya_A Pyruvate dehydrogenase 99.7 3.5E-17 1.2E-21 161.6 10.9 123 49-183 397-531 (549)
33 2wvg_A PDC, pyruvate decarboxy 99.7 4.8E-17 1.7E-21 161.2 11.5 153 18-181 365-541 (568)
34 1t9b_A Acetolactate synthase, 99.7 3.4E-17 1.2E-21 165.6 10.2 123 49-183 504-639 (677)
35 2vk8_A Pyruvate decarboxylase 99.7 1.5E-17 5E-22 164.7 6.8 157 18-181 365-542 (563)
36 1ybh_A Acetolactate synthase, 99.7 7.1E-17 2.4E-21 160.7 11.1 123 49-183 417-560 (590)
37 2vbi_A Pyruvate decarboxylase; 99.7 4.9E-17 1.7E-21 161.1 9.2 152 18-181 361-533 (566)
38 2vbf_A Branched-chain alpha-ke 99.7 6.5E-17 2.2E-21 160.3 9.9 154 17-181 376-551 (570)
39 2nxw_A Phenyl-3-pyruvate decar 99.7 5.1E-17 1.7E-21 161.0 8.3 121 49-181 413-542 (565)
40 1ovm_A Indole-3-pyruvate decar 99.7 8.2E-17 2.8E-21 158.9 7.5 152 18-181 360-532 (552)
41 2c31_A Oxalyl-COA decarboxylas 99.6 2.8E-16 9.4E-21 155.8 10.4 115 55-182 425-548 (568)
42 2q28_A Oxalyl-COA decarboxylas 99.6 3.7E-16 1.3E-20 154.7 9.9 116 54-182 419-545 (564)
43 2x7j_A 2-succinyl-5-enolpyruvy 99.6 2.6E-16 9E-21 157.1 4.4 151 18-181 405-580 (604)
44 3hww_A 2-succinyl-5-enolpyruvy 99.6 7.1E-16 2.4E-20 152.5 7.2 151 17-181 366-539 (556)
45 3lq1_A 2-succinyl-5-enolpyruvy 99.5 2.1E-15 7.3E-20 149.8 5.0 119 50-182 428-561 (578)
46 2c42_A Pyruvate-ferredoxin oxi 99.1 3.6E-10 1.2E-14 120.5 11.5 99 78-182 953-1071(1231)
47 2iht_A Carboxyethylarginine sy 95.5 0.077 2.6E-06 52.0 10.9 108 63-180 62-171 (573)
48 1ybh_A Acetolactate synthase, 95.5 0.069 2.3E-06 52.6 10.5 109 62-180 63-172 (590)
49 2uz1_A Benzaldehyde lyase; thi 95.4 0.088 3E-06 51.4 10.9 109 62-180 54-164 (563)
50 1ozh_A ALS, acetolactate synth 95.3 0.076 2.6E-06 52.0 9.9 108 63-180 62-170 (566)
51 2pgn_A Cyclohexane-1,2-dione h 95.0 0.14 4.9E-06 50.3 11.1 107 63-180 57-165 (589)
52 2vbi_A Pyruvate decarboxylase; 94.9 0.13 4.6E-06 50.2 10.7 110 62-180 54-169 (566)
53 3eya_A Pyruvate dehydrogenase 94.9 0.1 3.4E-06 50.9 9.6 107 63-179 55-161 (549)
54 2wvg_A PDC, pyruvate decarboxy 94.9 0.16 5.6E-06 49.6 11.1 110 62-180 54-169 (568)
55 1t9b_A Acetolactate synthase, 94.8 0.12 4E-06 51.9 10.1 107 63-179 134-241 (677)
56 2q28_A Oxalyl-COA decarboxylas 94.6 0.13 4.4E-06 50.3 9.4 110 63-180 59-169 (564)
57 2nxw_A Phenyl-3-pyruvate decar 94.4 0.13 4.5E-06 50.3 9.1 110 63-180 73-186 (565)
58 1v5e_A Pyruvate oxidase; oxido 94.4 0.11 3.9E-06 51.0 8.6 107 62-179 56-163 (590)
59 2c31_A Oxalyl-COA decarboxylas 94.3 0.14 4.6E-06 50.2 9.0 110 63-180 61-171 (568)
60 4feg_A Pyruvate oxidase; carba 94.1 0.12 4.1E-06 51.0 8.2 107 63-179 64-170 (603)
61 2pan_A Glyoxylate carboligase; 94.1 0.28 9.6E-06 48.4 10.8 108 63-179 79-187 (616)
62 1yd7_A 2-keto acid:ferredoxin 93.3 0.15 5.1E-06 47.8 6.8 111 62-186 77-192 (395)
63 2x7j_A 2-succinyl-5-enolpyruvy 93.1 0.19 6.4E-06 49.6 7.6 108 63-180 83-198 (604)
64 3mos_A Transketolase, TK; thia 92.8 0.52 1.8E-05 46.8 10.3 91 75-177 377-470 (616)
65 2o1s_A 1-deoxy-D-xylulose-5-ph 92.7 0.44 1.5E-05 47.3 9.6 103 62-178 374-477 (621)
66 2vk8_A Pyruvate decarboxylase 92.5 0.42 1.4E-05 46.5 9.1 109 63-180 56-170 (563)
67 2r8o_A Transketolase 1, TK 1; 92.5 0.73 2.5E-05 46.1 11.0 102 62-177 415-518 (669)
68 2e6k_A Transketolase; structur 92.4 0.67 2.3E-05 46.3 10.5 102 62-177 410-513 (651)
69 2o1x_A 1-deoxy-D-xylulose-5-ph 92.3 0.24 8.2E-06 49.3 7.2 102 62-178 377-479 (629)
70 1q6z_A BFD, BFDC, benzoylforma 92.3 0.24 8.3E-06 47.8 7.1 110 62-180 51-161 (528)
71 1itz_A Transketolase; calvin c 92.3 0.78 2.7E-05 46.0 10.9 100 63-177 428-531 (675)
72 1qs0_B 2-oxoisovalerate dehydr 92.3 0.42 1.4E-05 43.6 8.4 101 61-178 64-174 (338)
73 3lq1_A 2-succinyl-5-enolpyruvy 92.0 0.34 1.2E-05 47.4 7.7 108 64-179 64-177 (578)
74 2vbf_A Branched-chain alpha-ke 91.7 0.72 2.5E-05 44.9 9.7 109 62-180 76-190 (570)
75 1gpu_A Transketolase; transfer 91.5 0.78 2.7E-05 46.0 9.8 101 62-177 422-526 (680)
76 3kom_A Transketolase; rossmann 91.2 1.1 3.7E-05 44.9 10.5 103 61-177 415-519 (663)
77 3l84_A Transketolase; TKT, str 90.7 1.4 4.7E-05 43.9 10.6 101 62-177 395-497 (632)
78 1r9j_A Transketolase; domains, 90.3 1.7 5.9E-05 43.5 11.0 101 63-177 416-518 (673)
79 3uk1_A Transketolase; structur 89.4 2.3 8E-05 42.8 11.2 99 62-176 461-562 (711)
80 1ovm_A Indole-3-pyruvate decar 89.0 1.2 4.1E-05 43.1 8.5 109 62-180 56-170 (552)
81 3m49_A Transketolase; alpha-be 88.9 2.2 7.5E-05 42.9 10.5 102 62-177 440-543 (690)
82 2ozl_B PDHE1-B, pyruvate dehyd 87.9 2.1 7.2E-05 39.1 9.0 99 61-178 74-184 (341)
83 1ik6_A Pyruvate dehydrogenase; 87.4 2.8 9.6E-05 38.7 9.6 100 61-177 110-219 (369)
84 3hww_A 2-succinyl-5-enolpyruvy 86.0 1.5 5.1E-05 42.6 7.3 107 63-179 60-170 (556)
85 2bfd_B 2-oxoisovalerate dehydr 85.6 3.1 0.00011 37.9 8.8 99 61-177 79-189 (342)
86 1umd_B E1-beta, 2-OXO acid deh 85.0 7.9 0.00027 34.7 11.2 99 61-177 63-172 (324)
87 1w85_B Pyruvate dehydrogenase 84.8 3.6 0.00012 37.0 8.8 99 61-177 62-171 (324)
88 2c42_A Pyruvate-ferredoxin oxi 84.2 3.8 0.00013 43.9 9.8 112 62-186 67-178 (1231)
89 3rim_A Transketolase, TK; TPP, 83.0 5.5 0.00019 40.1 9.9 73 98-177 474-550 (700)
90 3ibs_A Conserved hypothetical 74.8 12 0.00042 30.5 8.3 87 62-148 92-196 (218)
91 2zzd_B Thiocyanate hydrolase s 68.3 7.8 0.00027 31.5 5.2 36 200-241 109-144 (157)
92 2yic_A 2-oxoglutarate decarbox 67.8 16 0.00053 37.7 8.6 106 61-176 596-708 (868)
93 2xt6_A 2-oxoglutarate decarbox 66.3 16 0.00055 38.7 8.5 107 61-177 841-954 (1113)
94 2jgd_A 2-oxoglutarate dehydrog 65.3 17 0.00058 37.8 8.3 104 61-176 664-776 (933)
95 4hhu_A OR280; engineered prote 63.2 8.8 0.0003 29.7 4.3 35 139-173 81-115 (170)
96 4hhu_A OR280; engineered prote 58.7 14 0.00048 28.5 4.8 33 141-173 2-34 (170)
97 1use_A VAsp, vasodilator-stimu 58.4 19 0.00065 22.8 4.5 24 224-247 5-28 (45)
98 2kl8_A OR15; structural genomi 58.4 14 0.00048 25.3 4.2 29 145-173 5-33 (85)
99 2w84_A Peroxisomal membrane pr 46.6 27 0.00091 24.3 4.1 23 207-230 32-54 (70)
100 3kcq_A Phosphoribosylglycinami 46.0 33 0.0011 29.0 5.7 56 77-149 8-66 (215)
101 4ds3_A Phosphoribosylglycinami 44.8 69 0.0024 26.9 7.5 71 77-164 7-83 (209)
102 3tqr_A Phosphoribosylglycinami 44.1 85 0.0029 26.4 7.9 54 78-148 6-61 (215)
103 3hbm_A UDP-sugar hydrolase; PS 44.0 63 0.0021 28.3 7.4 72 82-154 3-82 (282)
104 3c5c_A RAS-like protein 12; GD 42.5 1.2E+02 0.0041 23.7 9.1 59 105-167 126-185 (187)
105 1snn_A DHBP synthase, 3,4-dihy 42.0 31 0.0011 29.6 4.8 69 75-148 143-214 (227)
106 3ff5_A PEX14P, peroxisomal bio 41.2 36 0.0012 22.4 4.0 25 207-232 27-51 (54)
107 1pyo_A Caspase-2; apoptosis, c 41.1 64 0.0022 26.0 6.5 78 102-179 23-109 (167)
108 3av3_A Phosphoribosylglycinami 40.5 96 0.0033 25.9 7.7 82 79-180 5-91 (212)
109 3t5g_A GTP-binding protein RHE 38.5 1.1E+02 0.0038 23.4 7.5 62 105-170 110-171 (181)
110 3hht_B NitrIle hydratase beta 38.3 66 0.0023 27.6 6.3 29 200-234 73-101 (229)
111 3o1l_A Formyltetrahydrofolate 38.2 1.1E+02 0.0037 27.2 8.1 53 77-148 105-160 (302)
112 3da8_A Probable 5'-phosphoribo 38.1 1.5E+02 0.0053 24.8 8.7 80 79-180 14-98 (215)
113 1abz_A Alpha-T-alpha, ATA; de 37.4 28 0.00097 20.6 2.6 26 215-240 13-38 (40)
114 3cf4_G Acetyl-COA decarboxylas 35.6 32 0.0011 27.6 3.8 33 78-110 34-66 (170)
115 1n3y_A Integrin alpha-X; alpha 34.8 48 0.0017 26.3 4.8 80 78-165 110-192 (198)
116 3p9x_A Phosphoribosylglycinami 34.2 1.4E+02 0.0049 24.9 7.8 81 79-180 4-90 (211)
117 3mio_A DHBP synthase, 3,4-dihy 33.7 52 0.0018 27.7 4.8 89 57-148 95-196 (206)
118 3ghf_A Septum site-determining 33.7 49 0.0017 25.2 4.3 44 136-179 11-56 (120)
119 2h54_A Caspase-1; allosteric s 32.7 75 0.0026 25.9 5.6 69 109-177 45-114 (178)
120 3hyn_A Putative signal transdu 32.5 55 0.0019 27.2 4.7 37 78-115 80-118 (189)
121 3n0v_A Formyltetrahydrofolate 30.9 1.6E+02 0.0056 25.7 8.0 53 77-148 90-145 (286)
122 3lou_A Formyltetrahydrofolate 30.7 1.9E+02 0.0063 25.5 8.3 53 77-148 95-150 (292)
123 1tks_A 3,4-dihydroxy-2-butanon 30.3 71 0.0024 26.9 5.1 67 77-148 126-196 (204)
124 2x5n_A SPRPN10, 26S proteasome 29.8 71 0.0024 26.1 5.1 32 81-112 110-141 (192)
125 1on3_A Methylmalonyl-COA carbo 29.6 56 0.0019 31.5 4.9 43 78-120 94-144 (523)
126 1meo_A Phosophoribosylglycinam 29.6 2.1E+02 0.0073 23.7 8.1 81 79-180 2-88 (209)
127 2xf7_A GP23.1; viral protein; 28.8 56 0.0019 20.6 3.1 31 201-232 12-42 (51)
128 1x0u_A Hypothetical methylmalo 28.7 49 0.0017 31.9 4.4 41 78-118 90-138 (522)
129 1i4n_A Indole-3-glycerol phosp 28.2 1.3E+02 0.0045 25.9 6.7 31 79-110 74-105 (251)
130 1ugp_B NitrIle hydratase beta 27.8 66 0.0023 27.5 4.6 31 200-236 69-99 (226)
131 1ugp_A NitrIle hydratase alpha 27.8 52 0.0018 27.5 3.7 27 211-237 21-47 (203)
132 3tkl_A RAS-related protein RAB 27.7 1.9E+02 0.0064 22.3 7.2 32 132-163 143-177 (196)
133 2nly_A BH1492 protein, diverge 26.9 1.8E+02 0.006 25.0 7.2 44 133-177 142-191 (245)
134 3con_A GTPase NRAS; structural 26.6 2E+02 0.0067 22.1 7.1 53 106-163 126-181 (190)
135 2e62_A Protein AT5G25060; CWF2 26.6 1.2E+02 0.0041 20.4 4.7 32 210-241 25-56 (61)
136 3qyh_A CO-type nitrIle hydrata 26.6 46 0.0016 28.3 3.2 25 211-235 41-65 (226)
137 1m3s_A Hypothetical protein YC 26.5 1.5E+02 0.005 23.4 6.4 19 132-150 97-115 (186)
138 2zzd_C Thiocyanate hydrolase s 26.4 74 0.0025 27.3 4.5 24 211-234 32-55 (243)
139 1ex7_A Guanylate kinase; subst 26.3 2E+02 0.0069 23.2 7.3 59 210-281 125-183 (186)
140 3q85_A GTP-binding protein REM 26.3 1.6E+02 0.0054 22.0 6.4 54 106-163 109-165 (169)
141 2o3a_A UPF0106 protein AF_0751 25.9 88 0.003 25.6 4.7 41 132-176 23-63 (178)
142 3ljc_A ATP-dependent protease 25.9 1.6E+02 0.0054 25.0 6.8 67 197-282 184-250 (252)
143 3oes_A GTPase rhebl1; small GT 25.8 2.4E+02 0.0081 22.0 9.5 58 106-167 129-186 (201)
144 2p1h_A APAF-1, apoptotic prote 25.5 44 0.0015 23.9 2.6 25 210-234 24-48 (94)
145 3ahc_A Phosphoketolase, xylulo 25.2 5.1E+02 0.018 26.4 11.3 100 63-175 504-621 (845)
146 3auf_A Glycinamide ribonucleot 25.1 2.6E+02 0.009 23.5 8.0 82 79-180 24-110 (229)
147 2x24_A Acetyl-COA carboxylase; 25.0 48 0.0016 33.7 3.6 44 77-120 119-170 (793)
148 3sho_A Transcriptional regulat 24.9 1.7E+02 0.0059 22.9 6.5 79 57-150 44-123 (187)
149 1qtn_A Caspase-8; apoptosis, d 24.7 1.7E+02 0.0058 23.3 6.4 48 131-179 58-105 (164)
150 2bzr_A Propionyl-COA carboxyla 24.7 64 0.0022 31.3 4.4 43 78-120 107-157 (548)
151 2khz_A C-MYC-responsive protei 24.4 84 0.0029 25.0 4.4 35 79-116 79-113 (165)
152 4aec_A Cysteine synthase, mito 24.2 3.1E+02 0.01 25.5 8.9 58 102-173 194-251 (430)
153 1pfk_A Phosphofructokinase; tr 24.1 65 0.0022 29.0 4.0 35 79-119 96-133 (320)
154 1g57_A DHBP synthase, 3,4-dihy 24.1 99 0.0034 26.2 4.9 84 58-148 105-203 (217)
155 3gxh_A Putative phosphatase (D 24.1 86 0.0029 24.4 4.4 44 132-178 58-105 (157)
156 3tsm_A IGPS, indole-3-glycerol 23.9 3.2E+02 0.011 23.7 8.5 33 77-110 91-124 (272)
157 1vrg_A Propionyl-COA carboxyla 23.8 98 0.0034 29.8 5.5 43 78-120 97-147 (527)
158 2bln_A Protein YFBG; transfera 23.6 93 0.0032 27.5 5.0 61 82-151 3-63 (305)
159 4fm4_A NitrIle hydratase alpha 23.6 46 0.0016 28.0 2.6 25 211-235 14-38 (209)
160 2f9i_B Acetyl-coenzyme A carbo 23.3 85 0.0029 27.7 4.6 41 78-118 120-168 (285)
161 1ydn_A Hydroxymethylglutaryl-C 23.3 3.6E+02 0.012 23.2 10.2 106 59-179 20-142 (295)
162 3tbh_A O-acetyl serine sulfhyd 23.1 3.6E+02 0.012 23.7 8.9 40 98-149 86-126 (334)
163 3fhk_A UPF0403 protein YPHP; d 23.1 2.6E+02 0.0089 22.1 6.8 74 208-286 14-106 (147)
164 4a3s_A 6-phosphofructokinase; 23.0 70 0.0024 28.7 4.0 35 79-119 95-132 (319)
165 1kao_A RAP2A; GTP-binding prot 22.8 2.3E+02 0.0078 20.8 8.2 58 105-166 107-164 (167)
166 1nw9_B Caspase 9, apoptosis-re 22.6 1.6E+02 0.0054 25.5 6.2 70 109-179 23-96 (277)
167 3od5_A Caspase-6; caspase doma 22.6 1.6E+02 0.0054 25.7 6.2 70 108-178 22-95 (278)
168 4fm4_B NitrIle hydratase beta 22.5 61 0.0021 27.3 3.3 25 200-230 69-93 (206)
169 3hht_A NitrIle hydratase alpha 22.5 58 0.002 27.5 3.1 26 210-235 29-54 (216)
170 3iav_A Propionyl-COA carboxyla 22.3 83 0.0028 30.4 4.6 41 78-118 96-144 (530)
171 3o3m_B Beta subunit 2-hydroxya 22.2 3.9E+02 0.013 24.1 9.1 88 196-286 129-225 (385)
172 2j32_A Caspase-3; Pro-caspase3 22.1 1.3E+02 0.0044 25.7 5.4 68 109-177 18-89 (250)
173 1zxx_A 6-phosphofructokinase; 22.0 72 0.0025 28.6 3.9 35 79-119 95-132 (319)
174 3a8g_A NitrIle hydratase subun 21.5 47 0.0016 27.9 2.3 25 211-235 24-48 (207)
175 3n6r_B Propionyl-COA carboxyla 21.3 1E+02 0.0034 29.8 4.9 20 98-117 132-151 (531)
176 3etn_A Putative phosphosugar i 21.2 1.3E+02 0.0045 24.7 5.3 78 57-150 64-144 (220)
177 1k4i_A 3,4-dihydroxy-2-butanon 20.8 1.1E+02 0.0039 26.1 4.7 70 78-148 135-214 (233)
178 1g6u_A Domain swapped dimer; d 20.8 1.3E+02 0.0044 18.4 3.6 23 215-238 10-32 (48)
179 1is1_A Ribosome recycling fact 20.8 1.8E+02 0.0061 23.9 5.7 39 208-247 134-172 (185)
180 1wqg_A Ribosome recycling fact 20.6 1.8E+02 0.0061 23.9 5.7 39 208-247 134-172 (185)
181 2ywr_A Phosphoribosylglycinami 20.5 3.5E+02 0.012 22.3 7.8 82 79-180 3-89 (216)
182 3sir_A Caspase; hydrolase; 2.6 20.3 1.7E+02 0.0057 25.2 5.8 55 109-163 22-79 (259)
183 3k8x_A Acetyl-COA carboxylase; 20.3 1.1E+02 0.0036 31.0 5.0 44 77-120 103-154 (758)
184 2qv5_A AGR_C_5032P, uncharacte 20.2 1.4E+02 0.0048 25.9 5.3 44 133-177 169-217 (261)
No 1
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=100.00 E-value=1.5e-66 Score=496.69 Aligned_cols=291 Identities=46% Similarity=0.899 Sum_probs=259.7
Q ss_pred EeecCCCchHHHHHcCCCHHHHHHHhhcCCCCCCCCCCCccccCCCCCCcccccccccCccHHHHHHHHHhhhcCCCceE
Q 022717 2 TTLSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACA 81 (293)
Q Consensus 2 ~~~~~yR~~~~~l~~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~v 81 (293)
+|+++||+|++++++|+++.++|++|+|+.+++++|+++++|+..+..+++..+|+||+++|+|+|+|+|.++.+++++|
T Consensus 108 ~v~~~yR~~~~~~~~G~~~~~~l~e~~g~~~g~~~G~~~~~H~~~~~~~~~~~~g~lG~~lp~AvG~AlA~~~~~~~~~v 187 (400)
T 2bfd_A 108 LVFGQAREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRVV 187 (400)
T ss_dssp EEECCSCCHHHHHHTTCCHHHHHHHHHTCTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTHHHHHHHHHHHHHHHTCCCCE
T ss_pred EEEecCcCHHHHHHcCCCHHHHHHHhcCCCCCCCCCCCCCcCCcccccCccccCccccccccHHHHHHHhhhhhCCCCeE
Confidence 68899999999999999999999999999999889999999999888888888999999999999999999999999999
Q ss_pred EEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHH
Q 022717 82 VTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHA 161 (293)
Q Consensus 82 v~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~ 161 (293)
+|++|||++++|.+||+||+|++++||+||||+||+|+++++...+.+..++++++++|||++++|||+|+++|++++++
T Consensus 188 v~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~ 267 (400)
T 2bfd_A 188 ICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKE 267 (400)
T ss_dssp EEEEETTGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTCSSSTTGGGTGGGTCEEEEEETTCHHHHHHHHHH
T ss_pred EEEECchhhhcChHHHHHHHHHHHCcCEEEEEECCceeeeecccccCCCCCHHHHHHHcCCcEEEEeCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999887777778999999999999999999999999999999
Q ss_pred HHHHhhccCCcEEEEEEeecCCCCCCCCCCCCCCChHHHHHHHhCCCcHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q 022717 162 AREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 241 (293)
Q Consensus 162 a~~~~r~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr~~~e~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~ 241 (293)
|++++|++++|+|||++|||.+|||++|+|..||+++|++.|+...|||.+++++|++.|+||++++++|+++++++|++
T Consensus 268 A~~~ar~~~~P~lIe~~tyR~~gHs~~D~~~~Yr~~~e~~~~~~~~dPl~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~ 347 (400)
T 2bfd_A 268 ARRRAVAENQPFLIEAMTYRIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVME 347 (400)
T ss_dssp HHHHHHHHTCCEEEEEECCCCC--CC-------------------CCHHHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEEEeeeeCCCCCCCCCccCCCHHHHHHHHhcCCHHHHHHHHHHHCCCCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999985458999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCcccccccccCCCCccHHHHHHHHHHHHHhCCCCCCCCCC
Q 022717 242 ALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYPSNVP 292 (293)
Q Consensus 242 a~~~a~~~~~p~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 292 (293)
++++|++.|.|+++++|++||++.++.+.+|++++.+.+.++|++|+++.+
T Consensus 348 a~~~a~~~~~p~~~~~~~~vy~~~~~~l~~q~~~~~~~~~~~~~~~~~~~~ 398 (400)
T 2bfd_A 348 AFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYPLDHF 398 (400)
T ss_dssp HHHHHHHSCBCCGGGGSTTSSSSCCHHHHHHHHHHHHHHHHHGGGSCGGGB
T ss_pred HHHHHHhCCCCCHHHHHHHhhccCCHHHHHHHHHHHHHHHhCCCcCCcccc
Confidence 999999999999999999999999999999999999999999999987654
No 2
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A
Probab=100.00 E-value=7.9e-66 Score=492.11 Aligned_cols=273 Identities=37% Similarity=0.579 Sum_probs=261.6
Q ss_pred EeecCCCchHHHHHcCCCHHHHHHHhhcCCCCCCCCCCCccccCCCCCCcccccccccCccHHHHHHHHHhhhcCCCceE
Q 022717 2 TTLSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACA 81 (293)
Q Consensus 2 ~~~~~yR~~~~~l~~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~v 81 (293)
+++++||+|+++|++|+++.++|++|+|+..+.++|+++++|+.....++++.+|+||+++|+|+|+|+|.|+++++++|
T Consensus 127 ~v~~~yR~~~~~l~~g~~~~~i~~el~g~~~~~~~G~g~~~h~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~v 206 (407)
T 1qs0_A 127 MCFPTYRQQSILMARDVSLVEMICQLLSNERDPLKGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIA 206 (407)
T ss_dssp EEECCSSCHHHHHHTTCCHHHHHHHHHTCTTCTTTTCSCTTCCCBGGGTBCCCCSSSSHHHHHHHHHHHHHHHTTCCCCE
T ss_pred EEEecccchHHHHhcCCCHHHHHHHHhCCCCCCCCCCCceeecchhccCccccccccccchhHHHHHHHHHHHhCCCCEE
Confidence 67899999999999999999999999999988889999999998877889999999999999999999999999999999
Q ss_pred EEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCcc-CcccHHHHHhhcCceEEEEeCCCHHHHHHHHH
Q 022717 82 VTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQF-RSDGAVVKGRAYGVRSIRVDGNDALAIYSAVH 160 (293)
Q Consensus 82 v~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~-~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~ 160 (293)
||++|||++++|.++|+||+|++|+||+||||+||+|+++++....+ ...+++++|++||+++++|||+|+++|+++++
T Consensus 207 v~i~GDGa~~~G~~~Eal~~A~~~~lpvi~Vv~NN~~gi~~~~~~~~~~~~d~a~~a~a~G~~~~~VdG~D~~av~~a~~ 286 (407)
T 1qs0_A 207 SAWIGDGATAESDFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASR 286 (407)
T ss_dssp EEEEETGGGGSHHHHHHHHHHHHHTCCEEEEEEECSEETTEEGGGGTTTTCCSTHHHHHTTCEEEEEETTCHHHHHHHHH
T ss_pred EEEECCchhhcChHHHHHHHHHHHCcCEEEEEECCCcceeeccccccCCCCCHHHHHHHcCCeEEEEcCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999998876655 46799999999999999999999999999999
Q ss_pred HHHHHhhccCCcEEEEEEeecCCCCCCCCCCCCCCChHHHHHHHhCCCcHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q 022717 161 AAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQIL 240 (293)
Q Consensus 161 ~a~~~~r~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr~~~e~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~ 240 (293)
+|++++|++++|+|||++|||.+|||++|||..||+++|++.|+ ++|||.+|+++|+++|+||++++++|+++++++|+
T Consensus 287 ~A~~~ar~~~gP~lIe~~t~R~~Ghs~~Dd~~~Yr~~~e~~~~~-~~DPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~ 365 (407)
T 1qs0_A 287 WAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFP-LGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVI 365 (407)
T ss_dssp HHHHHHHTTSCCEEEEEECCCCSCSSTTCCGGGTSCTTHHHHCT-TCCHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEEeeccCCcCCCCCccccCCHHHHHHHh-cCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998 59999999999999999999999999999999999
Q ss_pred HHHHHHHh------CCCCCcccccccccCCCCccHHHHHHH
Q 022717 241 HALQEAEK------AEKPPISDLFTDVYDVSPSNLREQEHS 275 (293)
Q Consensus 241 ~a~~~a~~------~~~p~~~~~~~~v~~~~~~~~~~~~~~ 275 (293)
+++++|++ +|.|+++++|+|||+++|+++++|+++
T Consensus 366 ~a~~~a~~~~~~~~~p~p~~~~~~~~vy~~~~~~l~~q~~~ 406 (407)
T 1qs0_A 366 AAQKEAEQYGTLANGHIPSAASMFEDVYKEMPDHLRRQRQE 406 (407)
T ss_dssp HHHHHHHTTCCSSSCCCCCSSGGGSSSSSSCCHHHHHHHHT
T ss_pred HHHHHHHhcccccCCCCCCHHHHHhhccCCCCHHHHHHHHh
Confidence 99999998 579999999999999999999999875
No 3
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=100.00 E-value=6.7e-64 Score=473.73 Aligned_cols=269 Identities=37% Similarity=0.610 Sum_probs=248.7
Q ss_pred EeecCCCchHHHHHcCCCHHHHHHHhhcCCCCCCCCCCCccccCCCCCCcccccccccCccHHHHHHHHHhhhcCCCceE
Q 022717 2 TTLSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACA 81 (293)
Q Consensus 2 ~~~~~yR~~~~~l~~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~v 81 (293)
+++++||+|++++++|.++..+|++++|+.+ |+ ++| ...++.+.+|+||+++|+|+|+|+|.++.+++++|
T Consensus 97 ~v~~~~R~~~~~~~~G~~~~~~~~el~G~~~----G~--~~h---~~~~~~~~~g~lG~~lp~AvG~A~A~~~~~~~~~v 167 (368)
T 1w85_A 97 FILPGYRDVPQIIWHGLPLYQAFLFSRGHFH----GN--QIP---EGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVA 167 (368)
T ss_dssp EEECCSSCHHHHHHTTCCHHHHHHHHHTCGG----GG--CCC---TTCCBCCCCCSTTHHHHHHHHHHHHHHHTTCSCCE
T ss_pred EEEecchhHHHHHhcCCCHHHHHHHHCCCCC----CC--CCC---cccccCCCccccCccccHHHHHHHHhHhhCCCCeE
Confidence 5889999999999999999999999999864 33 345 34677888999999999999999999999999999
Q ss_pred EEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHH
Q 022717 82 VTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHA 161 (293)
Q Consensus 82 v~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~ 161 (293)
||++|||++++|.++|+||+|++++||+||||+||+|+++++.....+.++++++|++||+++++|||+|+++|+.++++
T Consensus 168 v~i~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~ 247 (368)
T 1w85_A 168 ITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKA 247 (368)
T ss_dssp EEEEETGGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTCSCSCSGGGGGGTTCCEEEEETTCHHHHHHHHHH
T ss_pred EEEEchhhhhhcHHHHHHHHHHHHCcCEEEEEEcCCccceeccccccCCCCHHHHHHHCCCCEEEEcCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998887777778999999999999999999999999999999
Q ss_pred HHHHhhccCCcEEEEEEeecCCCCC-CCCCCCCCCChHHHHHHHhCCCcHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q 022717 162 AREMAIGEGRPILIEALTYRVGHHT-TSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQIL 240 (293)
Q Consensus 162 a~~~~r~~~gP~lIe~~t~R~~gHs-~~Dd~~~Yr~~~e~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~ 240 (293)
|++++|++++|+|||++|||.+||| ++|||..||+++|++.|+ ++|||.+|+++|+++|+||++++++|+++++++|+
T Consensus 248 A~~~~r~~~gP~lIe~~t~r~~gHs~~~Ddp~~yr~~~e~~~~~-~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~ 326 (368)
T 1w85_A 248 ARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWA-KKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIK 326 (368)
T ss_dssp HHHHHHTTSCCEEEEEECCCSSCSCSSCC------CHHHHHHHH-TTCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEEEeeccCCCCCCCCCccccCCHHHHHHHh-cCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 999999999999999998 59999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCcccccccccCCCCccHHHHHHHHHHHH
Q 022717 241 HALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETI 280 (293)
Q Consensus 241 ~a~~~a~~~~~p~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 280 (293)
+++++|+++|.|+++++|+|||+++|+.+++|++++.+.+
T Consensus 327 ~a~~~a~~~p~p~~~~~~~~vy~~~~~~l~~q~~~~~~~~ 366 (368)
T 1w85_A 327 EAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKE 366 (368)
T ss_dssp HHHHHHHTSCCCCHHHHHHTSCSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCHHHHHhhccCCCChHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999997764
No 4
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*
Probab=100.00 E-value=2.2e-63 Score=470.53 Aligned_cols=277 Identities=42% Similarity=0.670 Sum_probs=265.6
Q ss_pred EeecCCCchHHHHHcCCCHHHHHHHhhcCCCCCCCCCCCccccCCCCCCcccccccccCccHHHHHHHHHhhhcCCCceE
Q 022717 2 TTLSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACA 81 (293)
Q Consensus 2 ~~~~~yR~~~~~l~~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~v 81 (293)
+|+++||+|++++.+|+++.++|++|+|+.++++.|+++++|+..+..+++..+|++|+++|.|+|+|+|.|+.+++++|
T Consensus 90 ~i~~s~r~~~~~~~~G~~~~~~l~~~~g~~~g~~~G~~~~~h~~~~~~~~~~~~g~lG~~l~~a~G~A~a~k~~~~~~~v 169 (367)
T 1umd_A 90 WVFPYYRDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRTGQVA 169 (367)
T ss_dssp EEECCTTTHHHHHHHTCCHHHHHHHHHTBTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTTHHHHHHHHHHHHHTTCCCCE
T ss_pred EEEeCcHHHHHHHHcCCCHHHHHHHHhCCCCCCCCCCCCCCCCcccccCcCCCCchhhhhhhHHHHHHHHHHHhCCCCeE
Confidence 57899999999999999999999999999999989999999998877888889999999999999999999999999999
Q ss_pred EEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHH
Q 022717 82 VTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHA 161 (293)
Q Consensus 82 v~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~ 161 (293)
||++|||++++|.++|+|++|+.+++|+||||+||+|+++++.....+..++.+++++||+++++|||+|+.+|++++++
T Consensus 170 v~i~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~av~~a~~~ 249 (367)
T 1umd_A 170 VCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKE 249 (367)
T ss_dssp EEEEETGGGGSHHHHHHHHHHHHTTCSEEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSCEEEEETTCHHHHHHHHHH
T ss_pred EEEEcccccccCcHHHHHHHHHHhCcCEEEEEecCCeeeccChhhccCCCCHHHHHHHcCCcEEEeCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998876666678999999999999999999999999999999
Q ss_pred HHHHhhccCCcEEEEEEeecCCCCCCCCCCCCCCChHHHHHHHhCCCcHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q 022717 162 AREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 241 (293)
Q Consensus 162 a~~~~r~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr~~~e~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~ 241 (293)
|+++++++++|+|||++|||..|||++|+|+.||+++|++.|+ ++|||.+|+++|+++|+||++++++|+++++++|++
T Consensus 250 A~~~a~~~~gP~lIe~~t~r~~Ghs~~D~~~~Yr~~~e~~~~~-~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~ 328 (367)
T 1umd_A 250 AVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELER 328 (367)
T ss_dssp HHHHHHTTCCCEEEEEECCCCSCSSTTCCGGGTSCHHHHHHHH-TTCHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEEEeecCCCCCCCCCccccCCHHHHHHHH-cCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 589999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCcccccccccCCCCccHHHHHHHHHHH
Q 022717 242 ALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRET 279 (293)
Q Consensus 242 a~~~a~~~~~p~~~~~~~~v~~~~~~~~~~~~~~~~~~ 279 (293)
++++|+++|.|+++++|+|||+++|+.+++|++++.+.
T Consensus 329 a~~~a~~~~~p~~~~~~~~vy~~~~~~l~~q~~~~~~~ 366 (367)
T 1umd_A 329 GLKEAEEAGPVPPEWMFEDVFAEKPWHLLRQEALLKEE 366 (367)
T ss_dssp HHHHHHHTCBCCGGGGGTTSSSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCHHHHHhhhcCCCChhHHHHHHHHHhh
Confidence 99999999999999999999999999999999998764
No 5
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*
Probab=100.00 E-value=1.8e-63 Score=469.99 Aligned_cols=262 Identities=29% Similarity=0.461 Sum_probs=247.0
Q ss_pred EeecCCCchHHHHHcCCCHHHHHHHhhcCCCCCCCCCCCccccCCCCCCcccccccccCccHHHHHHHHHhhhcCCCceE
Q 022717 2 TTLSSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACA 81 (293)
Q Consensus 2 ~~~~~yR~~~~~l~~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~v 81 (293)
+++++||+|++++++|+++.++|++|+|+.+++++|+++++|+.+ .++++.+|+||+++|+|+|+|+|.++++++++|
T Consensus 88 ~i~~~yR~~~~~~~~G~~~~~i~~e~~g~~~g~~~g~gg~~H~~~--~~~~~~~g~~G~~lp~A~G~A~A~~~~~~~~~v 165 (365)
T 2ozl_A 88 HLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYA--KNFYGGNGIVGAQVPLGAGIALACKYNGKDEVC 165 (365)
T ss_dssp EEECCSCCHHHHHHTTCCHHHHHHHHTTCTTSTTTTSSCTTCCCB--TTBCCCCCSTTTHHHHHHHHHHHHHHHTCCCCE
T ss_pred EEehHHHHHHHHHhcCCCHHHHHHHHcCCCCCCCCCCCCCCCcCc--cccCCCcchhhhhhHHHHHHHHHHHhcCCCceE
Confidence 689999999999999999999999999999998888888899854 477888899999999999999999999999999
Q ss_pred EEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHH
Q 022717 82 VTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHA 161 (293)
Q Consensus 82 v~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~ 161 (293)
||++|||++++|.++|+||+|++|+||+||||+||+|+++++.......+++++ ++||+++++|||+|+++|++++++
T Consensus 166 v~~~GDGa~~~G~~~Ealn~A~~~~lpvi~vv~NN~~g~~t~~~~~~~~~~~~~--ra~g~p~~~VdG~D~~av~~a~~~ 243 (365)
T 2ozl_A 166 LTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYK--RGDFIPGLRVDGMDILCVREATRF 243 (365)
T ss_dssp EEEEETTGGGCHHHHHHHHHHHHTTCCEEEEEEECSEETTEEHHHHCSCCCGGG--TTTTSCEEEEETTCHHHHHHHHHH
T ss_pred EEEECchhhhccHHHHHHHHHHHHCcCEEEEEECCCcccCCCcccccCCCCHHH--HhCCCCEEEEeCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999987766656677876 689999999999999999999999
Q ss_pred HHHHhhccCCcEEEEEEeecCCCCCCCCCCCCCCChHHHHHHHhCCCcHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q 022717 162 AREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 241 (293)
Q Consensus 162 a~~~~r~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr~~~e~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~ 241 (293)
|++++|++++|+|||++|||.+|||++|++..||+++|++.|++.+|||.+|+++|+++|+||++++++|+++++++|++
T Consensus 244 A~~~~r~~~gP~lIe~~t~R~~gHs~~D~~~~Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~ 323 (365)
T 2ozl_A 244 AAAYCRSGKGPILMELQTYRYHGHEMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIED 323 (365)
T ss_dssp HHHHHHTTCCCEEEEEECCCSSCSSTTCCSCSSSCHHHHHHHHHHHCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEEEeecCCCCCCCCCCcccCCHHHHHHHHhCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888999999999975579999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCcccccccccCCCCc
Q 022717 242 ALQEAEKAEKPPISDLFTDVYDVSPS 267 (293)
Q Consensus 242 a~~~a~~~~~p~~~~~~~~v~~~~~~ 267 (293)
++++|+++|.|+++++|+|||++.|+
T Consensus 324 a~~~a~~~p~p~~~~~~~~vy~~~~~ 349 (365)
T 2ozl_A 324 AAQFATADPEPPLEELGYHIYSSDPP 349 (365)
T ss_dssp HHHHHHHSCCCCGGGTTCSSSSSCCC
T ss_pred HHHHHHhCCCCCHHHHHhhhcCCCCh
Confidence 99999999999999999999997665
No 6
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=100.00 E-value=4.5e-53 Score=434.79 Aligned_cols=289 Identities=15% Similarity=0.142 Sum_probs=235.8
Q ss_pred Eeec-CCCchHHHHH--cCCCHHHHHHHhhcCCCCC-CC-CCCCccccCCCC------------CCcccccccccCccHH
Q 022717 2 TTLS-SLREPGVLLW--RGFSMQEFANQCFGNKADY-GK-GRQMPIHYGSNK------------HNYFTVSSTIATQLPH 64 (293)
Q Consensus 2 ~~~~-~yR~~~~~l~--~G~~~~~~~~~~~g~~~~~-~~-G~~~~~h~~~~~------------~~~~~~~g~lG~~lp~ 64 (293)
++++ +||||+++|+ +|+++.++|+||+|+.+++ ++ |+++++|++... .++.+++|+||+++|+
T Consensus 174 ~v~gm~hRg~~~~Lan~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~l~l~~n~s~Lg~~~P~ 253 (868)
T 2yic_A 174 VVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIEVSLTANPSHLEAVDPV 253 (868)
T ss_dssp EEEECCSTTHHHHHHHTTCCCHHHHTTTCC------------CGGGTCCEEEEEECSSSSCEEEEEECCCCSSTTTTHHH
T ss_pred EEEeccccchHHHHHHHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccccCCCcceeeeecCCCccccccccH
Confidence 4665 8999999999 9999999999999998876 43 455788987532 2344568999999999
Q ss_pred HHHHHHHhhhcC----------CCceEEEEeCcccc-cchHHHHHHHHHhhcCCC---EEEEEEeCCccccccccCccCc
Q 022717 65 AVGAAYALKMDR----------KDACAVTYFGDGGT-SEGDFHAALNFSAVTEAP---VIFICRNNGWAISTPISDQFRS 130 (293)
Q Consensus 65 A~G~A~a~k~~~----------~~~~vv~~~GDGa~-~~G~~~Eal~~A~~~~lp---vi~vi~NN~~~~~~~~~~~~~~ 130 (293)
|+|+|+|.|+.+ .+.+++|++|||++ +||.+||+||+|+.|+|| +||||+||+|+++++.....+.
T Consensus 254 A~G~A~A~k~~~~~~~~~~~~~~~~~vv~~~GDGa~~~eG~v~Ealn~A~~~~lp~g~vi~iv~NN~~g~st~~~~~~s~ 333 (868)
T 2yic_A 254 LEGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSS 333 (868)
T ss_dssp HHHHHHHHHHHHTCSTTSSSCSCCEEEEEEEEHHHHHHCHHHHHHHTTTTCTTTCCSCCEEEEEECSCBTTBCHHHHCSS
T ss_pred HHHHHHHHHhhccCCcccccccCCceEEEEECCcccccccHHHHHHHHHHhcCCCCCCeEEEEEcCCcccccCccccccc
Confidence 999999999864 56899999999996 899999999999999998 9999999999999976544455
Q ss_pred ccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCCCCCCChHHHHHHHhCCCcH
Q 022717 131 DGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPV 210 (293)
Q Consensus 131 ~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr~~~e~~~~~~~~dPi 210 (293)
.++.+++++|||++++|||+|+++|+.++++|++++|++++|+|||++|||.+|||++|+|+.|| +++++.|++.+||+
T Consensus 334 ~~~~~~a~a~G~p~~~VdG~D~~av~~a~~~A~~~ar~~~~PvlIe~~tyR~~GHs~~D~p~~~~-p~~~~~~~~~~dPi 412 (868)
T 2yic_A 334 EYCTDVAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPSMTQ-PYMYDVIDTKRGSR 412 (868)
T ss_dssp SSTTGGGGGGTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGGGTC-HHHHHHHTTCCCHH
T ss_pred cCHHHHHHhCCCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeecCCCcCcccccccCC-hHHHHHHHhCCCHH
Confidence 67888999999999999999999999999999999999999999999999999999999986555 55677777678999
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhC-C-CC-CcccccccccCC----CCccHHHHHHHHHHHHHhC
Q 022717 211 TRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKA-E-KP-PISDLFTDVYDV----SPSNLREQEHSLRETIKKH 283 (293)
Q Consensus 211 ~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~-~-~p-~~~~~~~~v~~~----~~~~~~~~~~~~~~~~~~~ 283 (293)
.+|+++|+++|++|++++++++++++++|++++++|++. | .| +. .++.++|.. .+....+.++.+.+.+...
T Consensus 413 ~~~~~~L~~~G~~t~ee~~~i~~e~~~~v~~a~~~a~~~~p~~~~~~-~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~ 491 (868)
T 2yic_A 413 KAYTEALIGRGDISMKEAEDALRDYQGQLERVFNEVRELEKHEIEPS-ESVEADQQIPSKLATAVDKAMLQRIGDAHLAL 491 (868)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHC------------------CCCCCCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccc-cccccccccccCCCCccCHHHHHHHHHhhccC
Confidence 999999999999999999999999999999999999873 2 22 22 334455642 3445677888888888999
Q ss_pred CCCCCCCCC
Q 022717 284 PQDYPSNVP 292 (293)
Q Consensus 284 p~~~~~~~~ 292 (293)
|++|.+|.-
T Consensus 492 p~~~~~~~~ 500 (868)
T 2yic_A 492 PEGFTVHPR 500 (868)
T ss_dssp CTTCCCCTT
T ss_pred Ccccccchh
Confidence 999998764
No 7
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.8e-52 Score=438.11 Aligned_cols=289 Identities=15% Similarity=0.152 Sum_probs=235.5
Q ss_pred Eeec-CCCchHHHHH--cCCCHHHHHHHhhcCCCCC-CC-CCCCccccCCCC------------CCcccccccccCccHH
Q 022717 2 TTLS-SLREPGVLLW--RGFSMQEFANQCFGNKADY-GK-GRQMPIHYGSNK------------HNYFTVSSTIATQLPH 64 (293)
Q Consensus 2 ~~~~-~yR~~~~~l~--~G~~~~~~~~~~~g~~~~~-~~-G~~~~~h~~~~~------------~~~~~~~g~lG~~lp~ 64 (293)
++++ +||||+++|+ +|+++.++|+||+|+.+++ ++ |+++++|++... .++.+++|+||+++|+
T Consensus 419 ~v~gm~hRg~~~~La~~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~l~l~~n~s~Lg~~~p~ 498 (1113)
T 2xt6_A 419 VVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIEVSLTANPSHLEAVDPV 498 (1113)
T ss_dssp EEEECCSTTHHHHHHHTTCCCHHHHSTTC-------------CGGGTCCEEEEEECSSSSCEEEEEECCCCSSTTTTHHH
T ss_pred EEEeccccchHHHHHHHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccccCCCcceeeeecCCCccccccccH
Confidence 4565 8999999999 9999999999999998876 43 455788987532 2344568999999999
Q ss_pred HHHHHHHhhhcC----------CCceEEEEeCcccc-cchHHHHHHHHHhhcCCC---EEEEEEeCCccccccccCccCc
Q 022717 65 AVGAAYALKMDR----------KDACAVTYFGDGGT-SEGDFHAALNFSAVTEAP---VIFICRNNGWAISTPISDQFRS 130 (293)
Q Consensus 65 A~G~A~a~k~~~----------~~~~vv~~~GDGa~-~~G~~~Eal~~A~~~~lp---vi~vi~NN~~~~~~~~~~~~~~ 130 (293)
|+|+|+|.|+.+ .+.+++|++|||++ +||.+||+||+|+.++|| +||||+||+|+++++.....+.
T Consensus 499 A~G~A~A~k~~~~~~~~~~~~~~~~~~v~~~GDGa~~~eG~~~Ealn~A~~~~lp~g~vi~iv~NN~~gist~~~~~~s~ 578 (1113)
T 2xt6_A 499 LEGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSS 578 (1113)
T ss_dssp HHHHHHHHHHHTTBSTTSSBSCCCEEEEEEEEHHHHHHCTHHHHHHTTTTCTTTCCSCCEEEEEECSCBTTBCHHHHCSS
T ss_pred HHHHHHHHHHhccccCccccccCCcEEEEEECCcccccccHHHHHHHHHhhcCCCCCCeEEEEEeCCcccccCccccccc
Confidence 999999999865 57899999999996 899999999999999998 9999999999999976544445
Q ss_pred ccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCCCCCCChHHHHHHHhCCCcH
Q 022717 131 DGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPV 210 (293)
Q Consensus 131 ~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr~~~e~~~~~~~~dPi 210 (293)
.++.+++++|||++++|||+|+++|+.++++|++++|++++|+|||++|||.+|||++|+|+.||+ +|++.|++.+||+
T Consensus 579 ~~~~~~a~a~G~p~~~VdG~D~~av~~a~~~A~~~~r~~~~PvlIe~~tyR~~GHs~~D~p~~~~~-~~~~~~~~~~dpi 657 (1113)
T 2xt6_A 579 EYCTDVAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPSMTQP-YMYDVIDTKRGSR 657 (1113)
T ss_dssp SSTTGGGGGGTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGGGTCH-HHHHHHTTCCCHH
T ss_pred cCHHHHHHhcCCcEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeEccCCcCCCCccccCCh-HHHHHHHhcCCHH
Confidence 567889999999999999999999999999999999999999999999999999999999865554 5667776678999
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhC-C-CC-CcccccccccCC----CCccHHHHHHHHHHHHHhC
Q 022717 211 TRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKA-E-KP-PISDLFTDVYDV----SPSNLREQEHSLRETIKKH 283 (293)
Q Consensus 211 ~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~-~-~p-~~~~~~~~v~~~----~~~~~~~~~~~~~~~~~~~ 283 (293)
.+|+++|+++|++|++++++|+++++++|++++++|++. | .| +. ..+.++|.. .+....+.++.+.+.+...
T Consensus 658 ~~~~~~L~~~G~~t~ee~~~i~~e~~~~v~~a~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~ 736 (1113)
T 2xt6_A 658 KAYTEALIGRGDISMKEAEDALRDYQGQLERVFNEVRELEKHEIEPS-ESVEADQQIPSKLATAVDKAMLQRIGDAHLAL 736 (1113)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------------CCCCCCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccc-cccccccccccCCCCccCHHHHHHHHHhhccC
Confidence 999999999999999999999999999999999999884 2 22 22 334556642 3445678888999999999
Q ss_pred CCCCCCCCC
Q 022717 284 PQDYPSNVP 292 (293)
Q Consensus 284 p~~~~~~~~ 292 (293)
|++|.+|..
T Consensus 737 p~~~~~~~~ 745 (1113)
T 2xt6_A 737 PEGFTVHPR 745 (1113)
T ss_dssp CTTCCCCTT
T ss_pred Ccccccchh
Confidence 999998864
No 8
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=3.3e-51 Score=423.16 Aligned_cols=289 Identities=15% Similarity=0.101 Sum_probs=227.0
Q ss_pred Eee-cCCCchHHHHH--cCCCHHHHHHHhhcCCCCCCCCCCCccccCCCCC----------CcccccccccCccHHHHHH
Q 022717 2 TTL-SSLREPGVLLW--RGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKH----------NYFTVSSTIATQLPHAVGA 68 (293)
Q Consensus 2 ~~~-~~yR~~~~~l~--~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~----------~~~~~~g~lG~~lp~A~G~ 68 (293)
+++ ++||||+++|+ +|+++.++|+||+|+.++.+.|+++++|++.... ++...++++|+++|+|+|+
T Consensus 254 ~v~g~~hRg~~~~Lan~~G~~~~~i~~e~~G~~~g~~g~gdv~~Hlg~~~~~~~~gg~~~l~l~~~~shlg~~~p~A~G~ 333 (933)
T 2jgd_A 254 VVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGS 333 (933)
T ss_dssp EEEECCSTTHHHHHHHTTCCCHHHHHHHHHTCC--CCSCCCCGGGCCEEEEEEETTEEEEEEECCCCSSTTCHHHHHHHH
T ss_pred EEecCCCcCHHHHHHHHhCCCHHHHHHHhcCCCCCCCCCCCccccCCcccccccCCCceEEeecccCcccccccCHHHHH
Confidence 466 58999999999 9999999999999998887666778899876432 2345679999999999999
Q ss_pred HHHhhhcC-----CCceEEEEeCcccc-cchHHHHHHHHHhhcCCC---EEEEEEeCCccccc-cccCccCcccHHHHHh
Q 022717 69 AYALKMDR-----KDACAVTYFGDGGT-SEGDFHAALNFSAVTEAP---VIFICRNNGWAIST-PISDQFRSDGAVVKGR 138 (293)
Q Consensus 69 A~a~k~~~-----~~~~vv~~~GDGa~-~~G~~~Eal~~A~~~~lp---vi~vi~NN~~~~~~-~~~~~~~~~d~~~~a~ 138 (293)
|+|.++++ .+.++||++|||++ ++|+++|+||+|+.+++| +||||+||+|+|++ +...+....+++++++
T Consensus 334 A~A~~~~~~~~~~~~~~vv~v~GDGa~a~qG~~~Ealn~A~~~~lp~gg~I~vv~nN~~~ist~~~~~~~~~~~~~~~a~ 413 (933)
T 2jgd_A 334 VRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGK 413 (933)
T ss_dssp HHHHHTTSSSCCGGGEEEEEEEEHHHHHHCTHHHHHHHHTTSTTTCCSCCEEEEEECC---------------CGGGGGG
T ss_pred HHHHHhhccccCCCCeEEEEEECCcccccCCHHHHHHHHhhccCCCCCceEEEEEeCCccccCCCHHhcccchhHHHHHH
Confidence 99999874 67899999999998 999999999999999999 99999999999999 8877666678899999
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCCCCCCChHHHHHHHhCCCcHHHHHHHHH
Q 022717 139 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIE 218 (293)
Q Consensus 139 a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr~~~e~~~~~~~~dPi~~~~~~L~ 218 (293)
+||+++++|||+|+++|++++++|++++|++++|+|||+.|||.+||+++|+| .||+++|++.|++.+||+.+|+++|+
T Consensus 414 a~g~p~~~VdG~D~~av~~a~~~A~e~~r~~~~P~lIe~~tyR~~GH~~~D~~-~yr~~~e~~~~~~~~dPi~~~~~~Li 492 (933)
T 2jgd_A 414 MVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEP-SATQPLMYQKIKKHPTPRKIYADKLE 492 (933)
T ss_dssp TTTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC------------CCTTHHHHHTSCCHHHHHHHHHH
T ss_pred HcCCCEEEECCCCHHHHHHHHHHHHHHHHhcCCCEEEEEeeeeecCcCcccch-hhCCHHHHHHHHccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999986 59999999999855799999999999
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCCCccccccccc------CCCCccHHHHHHHHHHHHHhCCCCCCCCC
Q 022717 219 SNGWWNGDIESELRSSVRKQILHALQEAEKA-EKPPISDLFTDVY------DVSPSNLREQEHSLRETIKKHPQDYPSNV 291 (293)
Q Consensus 219 ~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~-~~p~~~~~~~~v~------~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 291 (293)
++|++|++++++++++++++|+++++.|++. |.|.....+..+. ...+....+.++.+.+.+...|++|.+|.
T Consensus 493 ~~Gv~t~~~~~~i~~~~~~~v~~a~~~A~~~~p~~~~~~~~~~~~~~~~~~~~~tg~~~~~l~~i~~~~~~~p~~~~~~~ 572 (933)
T 2jgd_A 493 QEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPEAVEMQS 572 (933)
T ss_dssp TTTSSCHHHHHHHHHHHHHHHHHTSCCCTTEECCCGGGCTTGGGSSCCTTCCCCCCCCHHHHHHHHHHTTCCCTTSCCCH
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhhcccccccccccCCCCCCCHHHHHHHHhhhcCCCCCCcccH
Confidence 9999999999999999999999999998873 3321112232221 12334456677888888888999998763
No 9
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=99.97 E-value=3e-30 Score=260.99 Aligned_cols=189 Identities=21% Similarity=0.229 Sum_probs=155.7
Q ss_pred hHHHHHcCC--CHHHHHHHhhcCCCCCCCCCCCccccCCCCCCcccccccccCccHHHHHHHHHhhhcC----------C
Q 022717 10 PGVLLWRGF--SMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDR----------K 77 (293)
Q Consensus 10 ~~~~l~~G~--~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~----------~ 77 (293)
.+++...|. +.++ +..++. .|+-++.|+.....++...+|++|+++|.|+|+|+|.++.+ .
T Consensus 75 Ya~~~l~G~~~~~~~-l~~~r~------~g~~~~ghp~~~~~g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~ 147 (680)
T 1gpu_A 75 YSMLHLTGYDLSIED-LKQFRQ------LGSRTPGHPEFELPGVEVTTGPLGQGISNAVGMAMAQANLAATYNKPGFTLS 147 (680)
T ss_dssp HHHHHHTTCSCCHHH-HTTTTC------TTCSCCSSCCTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCC
T ss_pred HHHHHHhCCCCCHHH-HHhhcc------cCCCCCCCCCccCCCeeeccccccchHHHHHHHHHHHHHhccccccCccCCC
Confidence 445555665 4443 344432 24445778877445566778999999999999999998654 3
Q ss_pred CceEEEEeCcccccchHHHHHHHHHhhcCCC-EEEEEEeCCccccccccCccCcccHHHHHhhcCceEE-EEeCC-CHHH
Q 022717 78 DACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSI-RVDGN-DALA 154 (293)
Q Consensus 78 ~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lp-vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~-~VdG~-D~~~ 154 (293)
+++|+|++|||++++|+++|+|++|+.++|| +|+||+||+|++++++.... ..++.+++++|||+++ +|||| |+++
T Consensus 148 ~~~vv~i~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~ 226 (680)
T 1gpu_A 148 DNYTYVFLGDGCLQEGISSEASSLAGHLKLGNLIAIYDDNKITIDGATSISF-DEDVAKRYEAYGWEVLYVENGNEDLAG 226 (680)
T ss_dssp CCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHHTCEEEEESCTTTCHHH
T ss_pred CCeEEEEECCCccchhhHHHHHHHHHHhCCCcEEEEEECCCceEeccccccc-CccHHHHHHhcCCeEEEEecCCCCHHH
Confidence 7899999999999999999999999999997 99999999999998876554 5799999999999999 99999 9999
Q ss_pred HHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCC---CCCCChHHHHHHHhCCCcH
Q 022717 155 IYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDS---TKYRPVDEIEWWRTTQDPV 210 (293)
Q Consensus 155 v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~Dd~---~~Yr~~~e~~~~~~~~dPi 210 (293)
+++++++|.+ ..++|+||+++|+|.+||+..|++ ..||+++|++.|++ ++++
T Consensus 227 l~~al~~A~~---~~~~P~lI~~~T~kg~G~~~~~~~~~H~~~~~~ee~~~~~~-~~~~ 281 (680)
T 1gpu_A 227 IAKAIAQAKL---SKDKPTLIKMTTTIGYGSLHAGSHSVHGAPLKADDVKQLKS-KFGF 281 (680)
T ss_dssp HHHHHHHHHH---CTTSCEEEEEECCTTTTSTTTTSGGGSSSCCCHHHHHHHHH-HTTC
T ss_pred HHHHHHHHHH---CCCCCEEEEEEeecccccccCCCCccCCCCCCHHHHHHHHH-HcCC
Confidence 9999999875 258899999999999999977653 57999999999973 4444
No 10
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=99.97 E-value=8.3e-31 Score=264.01 Aligned_cols=192 Identities=22% Similarity=0.212 Sum_probs=154.9
Q ss_pred CCCc---hHHHHHcCC--CHHHHHHHhhcCCCCCCCCCCCccccCCCC-CCcccccccccCccHHHHHHHHHhhhcC---
Q 022717 6 SLRE---PGVLLWRGF--SMQEFANQCFGNKADYGKGRQMPIHYGSNK-HNYFTVSSTIATQLPHAVGAAYALKMDR--- 76 (293)
Q Consensus 6 ~yR~---~~~~l~~G~--~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~-~~~~~~~g~lG~~lp~A~G~A~a~k~~~--- 76 (293)
.|-+ .+++...|. +.++ +..++. .|+..+.|+.... .++...+|+||+++|.|+|+|+|.++.+
T Consensus 69 GH~~~~lYa~l~l~G~~~~~~~-l~~~r~------~~~~~~ghp~~~~~~g~~~~~G~lG~gl~~AvG~A~A~~~~~~~~ 141 (651)
T 2e6k_A 69 GHGSMLLYAVLHLTGYDLPLEE-LKSFRQ------WGSKTPGHPERGHTPGVEVTTGPLGQGISTAVGLALAERKLAAEF 141 (651)
T ss_dssp GGGHHHHHHHHHHTTCSCCHHH-HTTTTS------TTCSCCSSCCBTTBTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHhCCCCCHHH-HHHhhc------cCCCCCCCCCCCCCCCeeeccccccchHHHHHHHHHHHHhhcccc
Confidence 3555 444555665 3443 444432 2343466776543 3455678999999999999999998754
Q ss_pred -------CCceEEEEeCcccccchHHHHHHHHHhhcCCC-EEEEEEeCCccccccccCccCcccHHHHHhhcCceEE-EE
Q 022717 77 -------KDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSI-RV 147 (293)
Q Consensus 77 -------~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lp-vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~-~V 147 (293)
.+++|+|++|||++++|+++|+|++|+.++|| +|+||+||+|++++++...+ ..|+.+++++|||+++ +|
T Consensus 142 ~~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~v 220 (651)
T 2e6k_A 142 NRPGHVVVDHYTYVLASDGDLMEGVSGEAASLAGHWGLSKLIVFWDDNRISIDGPTDLAF-TEDVLARYRAYGWQTLRVE 220 (651)
T ss_dssp CBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECCEETTEEGGGTC-CSCHHHHHHHTTCEEEEES
T ss_pred cccccCCCCCEEEEEEChhhhchhHHHHHHHHHHHcCCCeEEEEEECCCccccccccccc-CccHHHHHHhCCCeEEEEe
Confidence 68899999999999999999999999999997 99999999999998877665 6799999999999999 99
Q ss_pred eCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCCCCC----CChHHHHHHHhCCCcHH
Q 022717 148 DGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKY----RPVDEIEWWRTTQDPVT 211 (293)
Q Consensus 148 dG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~Dd~~~Y----r~~~e~~~~~~~~dPi~ 211 (293)
||||++++++++++|.+ .++|+||+++|+|.+||+ .+++..| ++++|++.|+ +++|+.
T Consensus 221 dG~d~~~l~~al~~a~~----~~~P~lI~~~t~kg~G~~-~~~~~~~H~~~~~~~e~~~~~-~~~~~~ 282 (651)
T 2e6k_A 221 DVNDLEALRKAIKLAKL----DERPTLIAVRSHIGFGSP-KQDSAKAHGEPLGPEAVEATR-RNLGWP 282 (651)
T ss_dssp CTTCHHHHHHHHHHHHH----SSSCEEEEEECCTTTTST-TTTSGGGTSSCCHHHHHHHHH-HHHTCC
T ss_pred CCCCHHHHHHHHHHHHH----CCCCEEEEEEeEeccccc-ccccccccccCCCHHHHHHHH-HHcCCC
Confidence 99999999999998875 689999999999999999 5555555 4678899997 467663
No 11
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.97 E-value=4.7e-29 Score=251.92 Aligned_cols=183 Identities=21% Similarity=0.221 Sum_probs=150.2
Q ss_pred HHHHcCC--CHHHHHHHhhcCCCCCCCCCCCccccCCCCCC-cccccccccCccHHHHHHHHHhhhcC----------CC
Q 022717 12 VLLWRGF--SMQEFANQCFGNKADYGKGRQMPIHYGSNKHN-YFTVSSTIATQLPHAVGAAYALKMDR----------KD 78 (293)
Q Consensus 12 ~~l~~G~--~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~-~~~~~g~lG~~lp~A~G~A~a~k~~~----------~~ 78 (293)
++...|. +.+++ ..++. .|+..++|+.....+ +...+|+||+++|.|+|+|+|.++.+ .+
T Consensus 76 ~l~l~G~~~~~~~l-~~~r~------~~s~~~ghp~~~~~pgv~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~g~~~~d 148 (673)
T 1r9j_A 76 LLHMAGYNLTMDDL-KGFRQ------DGSRTPGHPERFVTPGVEVTTGPLGQGIANAVGLAIAEAHLAATFNRPGYNIVD 148 (673)
T ss_dssp HHHHHTCSCCHHHH-HTTTS------TTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCC
T ss_pred HHHHcCCCCCHHHH-Hhhcc------CCCCCCCCCCCCCCCCeeeccCCCCCcHHHHHHHHHHHHHhhhhccccccCCCC
Confidence 4444565 34444 44532 355667888765444 44568999999999999999998754 58
Q ss_pred ceEEEEeCcccccchHHHHHHHHHhhcCCC-EEEEEEeCCccccccccCccCcccHHHHHhhcCceEE-EEeC-CCHHHH
Q 022717 79 ACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSI-RVDG-NDALAI 155 (293)
Q Consensus 79 ~~vv~~~GDGa~~~G~~~Eal~~A~~~~lp-vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~-~VdG-~D~~~v 155 (293)
++|+|++|||++++|+++|++++|+.++|| +|+||+||+|++++++.... ..|+.+++++|||+++ +||| ||++++
T Consensus 149 ~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~d~N~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l 227 (673)
T 1r9j_A 149 HYTYVYCGDGCLMEGVCQEALSLAGHLALEKLIVIYDSNYISIDGSTSLSF-TEQCHQKYVAMGFHVIEVKNGDTDYEGL 227 (673)
T ss_dssp CCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECSBCSSSBGGGTC-CCCHHHHHHHTTCEEEEESCTTTCHHHH
T ss_pred CEEEEEECcchhcccHHHHHHHHHHHhCCCcEEEEEECCCCccccchhhcc-CHhHHHHHHHCCCeEEEEeCCCCCHHHH
Confidence 899999999999999999999999999997 99999999999998887666 6799999999999999 8999 999999
Q ss_pred HHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCC---CCCCChHHHHHHHh
Q 022717 156 YSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDS---TKYRPVDEIEWWRT 205 (293)
Q Consensus 156 ~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~Dd~---~~Yr~~~e~~~~~~ 205 (293)
++++++|.+ ..++|++|+++|+|.+||+..|.. ..+++++|++.|++
T Consensus 228 ~~Al~~A~~---~~~~P~lI~~~T~kg~G~~~~~~~~~H~~~~~~ee~~~~~~ 277 (673)
T 1r9j_A 228 RKALAEAKA---TKGKPKMIVQTTTIGFGSSKQGTEKVHGAPLGEEDIANIKA 277 (673)
T ss_dssp HHHHHHHHH---CCSSCEEEEEECCTTTTSTTTTSGGGTSSCCCHHHHHHHHH
T ss_pred HHHHHHHHH---cCCCCEEEEEecccccccccCCCcccccCCCCHHHHHHHHH
Confidence 999998875 368999999999999999854432 34677888888863
No 12
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=99.96 E-value=6.7e-29 Score=250.69 Aligned_cols=175 Identities=21% Similarity=0.203 Sum_probs=144.5
Q ss_pred cCCCc---hHHHHHcC--CCHHHHHHHhhcCCCCCCCCCCCccccCCCCCCcc-cccccccCccHHHHHHHHHhhhc---
Q 022717 5 SSLRE---PGVLLWRG--FSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYF-TVSSTIATQLPHAVGAAYALKMD--- 75 (293)
Q Consensus 5 ~~yR~---~~~~l~~G--~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~~-~~~g~lG~~lp~A~G~A~a~k~~--- 75 (293)
..|-+ .+++...| ++.++ +..|+. .|+.++.|+.....+.+ ..+|++|+++|.|+|+|+|.|+.
T Consensus 83 ~GH~s~~lYa~l~l~G~~~~~~~-l~~fr~------~gs~~~ghp~~~~~pgv~~~tG~lG~gl~~AvG~AlA~k~~~~~ 155 (700)
T 3rim_A 83 AGHSSLTLYIQLYLGGFGLELSD-IESLRT------WGSKTPGHPEFRHTPGVEITTGPLGQGLASAVGMAMASRYERGL 155 (700)
T ss_dssp STTCHHHHHHHHHHTTSSCCHHH-HTTTTS------TTCSCCSSCCBTTBTTCCSCCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHhCCCCCHHH-HHHhhc------CCCCCCCCCCCCCCCCccccccccCCcchHHHHHHHHHHHHhhh
Confidence 35666 33455566 45555 444532 35657888876544444 45899999999999999999974
Q ss_pred ----------CCCceEEEEeCcccccchHHHHHHHHHhhcCCC-EEEEEEeCCccccccccCccCcccHHHHHhhcCceE
Q 022717 76 ----------RKDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRS 144 (293)
Q Consensus 76 ----------~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lp-vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~ 144 (293)
+.+++|+|++|||++++|++||++++|+.++|| +|+||+||+|+|++++.... ..++.+++++|||++
T Consensus 156 ~~~~~~~~~~~~~~~v~~~~GDG~l~eG~~~EAl~~A~~~~L~nli~i~d~N~~si~~~~~~~~-~~~~~~~~~a~G~~~ 234 (700)
T 3rim_A 156 FDPDAEPGASPFDHYIYVIASDGDIEEGVTSEASSLAAVQQLGNLIVFYDRNQISIEDDTNIAL-CEDTAARYRAYGWHV 234 (700)
T ss_dssp HCTTSCTTCSTTCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHHTCEE
T ss_pred ccccccccccCCCCeEEEEECCcccccChHHHHHHHHHHcCCCcEEEEEECCCcccccchhhcc-chhHHHHHHHcCCeE
Confidence 568899999999999999999999999999996 99999999999998887654 679999999999999
Q ss_pred EEE-eCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCC
Q 022717 145 IRV-DGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDD 190 (293)
Q Consensus 145 ~~V-dG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~Dd 190 (293)
++| ||||+++|++++++|.+ ..++|+||+++|+|.+||+...+
T Consensus 235 ~~V~DG~D~~al~~Al~~A~~---~~~~P~lI~~~T~kG~G~~~~e~ 278 (700)
T 3rim_A 235 QEVEGGENVVGIEEAIANAQA---VTDRPSFIALRTVIGYPAPNLMD 278 (700)
T ss_dssp EEEECTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTT
T ss_pred EEECCCCCHHHHHHHHHHHHH---cCCCCEEEEEEEEeeecCCccCC
Confidence 999 99999999999998865 36899999999999999986543
No 13
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=99.96 E-value=2.2e-28 Score=244.87 Aligned_cols=168 Identities=23% Similarity=0.240 Sum_probs=137.8
Q ss_pred HHHHcCCCHHHHHHHhhcCCCCCCCCCCCccccCCCCCCcc-cccccccCccHHHHHHHHHhhhcCC-CceEEEEeCccc
Q 022717 12 VLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYF-TVSSTIATQLPHAVGAAYALKMDRK-DACAVTYFGDGG 89 (293)
Q Consensus 12 ~~l~~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~~-~~~g~lG~~lp~A~G~A~a~k~~~~-~~~vv~~~GDGa 89 (293)
++...|.-+.+-+..++. .|+++++|+.... +.+ ..+|++|+++|+|+|+|+|.++.+. +++|+|++|||+
T Consensus 83 ~~~l~G~~~~~~l~~~r~------~~s~l~ghp~~~~-~~~d~~~G~lG~gl~~A~G~AlA~~~~~~~~~~vv~v~GDG~ 155 (616)
T 3mos_A 83 VWAEAGFLAEAELLNLRK------ISSDLDGHPVPKQ-AFTDVATGSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGE 155 (616)
T ss_dssp HHHHTTSSCGGGGGGTTC------TTCSCCSSCCTTS-TTCSSCCCSTTCHHHHHHHHHHHHHHTSCCSCCEEEEEETGG
T ss_pred HHHHcCCCCHHHHHHhcc------CCCCCCCCCCCCC-CcccccccccCCccHHHHHHHHHHHHhCCCCCEEEEEECccc
Confidence 444567522223444431 3667888887543 333 3579999999999999999986554 689999999999
Q ss_pred ccchHHHHHHHHHhhcCCC-EEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhc
Q 022717 90 TSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIG 168 (293)
Q Consensus 90 ~~~G~~~Eal~~A~~~~lp-vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~ 168 (293)
+++|+++|+|++|+.++|| +|+|++||+|++++++.......++.+++++|||++++|||||++++.++++++
T Consensus 156 ~~eG~~~Eal~~A~~~~l~~livi~nnN~~~i~~~~~~~~~~~~~~~~~~a~G~~~~~VdG~d~~~l~~al~~~------ 229 (616)
T 3mos_A 156 LSEGSVWEAMAFASIYKLDNLVAILDINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQA------ 229 (616)
T ss_dssp GGSHHHHHHHHHHHHTTCTTEEEEEEECSBCSSSBCTTTTCHHHHHHHHHHTTCEEEEEETTCHHHHHHHHHSC------
T ss_pred cccCcHHHHHHHHHHcCCCcEEEEEECCCCCCcCCcccccChHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHhc------
Confidence 9999999999999999997 889999999999988776666678999999999999999999999999988543
Q ss_pred cCCcEEEEEEeecCCCCCCCCCCC
Q 022717 169 EGRPILIEALTYRVGHHTTSDDST 192 (293)
Q Consensus 169 ~~gP~lIe~~t~R~~gHs~~Dd~~ 192 (293)
.++|+||+++|+|.+||+..+++.
T Consensus 230 ~~~P~lI~v~T~kg~G~~~~e~~~ 253 (616)
T 3mos_A 230 KHQPTAIIAKTFKGRGITGVEDKE 253 (616)
T ss_dssp CSSCEEEEEECCTTTTSTTTTTCS
T ss_pred CCCCEEEEEEEecccccccccCch
Confidence 479999999999999998776554
No 14
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=99.96 E-value=5.3e-28 Score=244.27 Aligned_cols=165 Identities=25% Similarity=0.273 Sum_probs=141.9
Q ss_pred CCCCccccCCCCC-CcccccccccCccHHHHHHHHHhhhcC----------CCceEEEEeCcccccchHHHHHHHHHhhc
Q 022717 37 GRQMPIHYGSNKH-NYFTVSSTIATQLPHAVGAAYALKMDR----------KDACAVTYFGDGGTSEGDFHAALNFSAVT 105 (293)
Q Consensus 37 G~~~~~h~~~~~~-~~~~~~g~lG~~lp~A~G~A~a~k~~~----------~~~~vv~~~GDGa~~~G~~~Eal~~A~~~ 105 (293)
|+-.+.|+..... ++...+|+||+++|.|+|+|+|.++.+ .+++|+|++|||++++|+++|+|++|+.+
T Consensus 94 ~~~~~ghp~~~~~~g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~ 173 (669)
T 2r8o_A 94 HSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTL 173 (669)
T ss_dssp TCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHT
T ss_pred CCCCCCCCCccCCCCcccccccccchHHHHHHHHHHHHHhccccccCccCCcCCeEEEEECHhHhcchHHHHHHHHHHHc
Confidence 4444678765443 455568999999999999999998653 37899999999999999999999999999
Q ss_pred CCC-EEEEEEeCCccccccccCccCcccHHHHHhhcCceEE-EEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCC
Q 022717 106 EAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSI-RVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 183 (293)
Q Consensus 106 ~lp-vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~-~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~ 183 (293)
+|| +|+||+||+|++++++.... ..++.+++++|||+++ +|||||++++++++++|.+ ..++|+||+++|+|..
T Consensus 174 ~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~~---~~~~P~lI~~~T~kg~ 249 (669)
T 2r8o_A 174 KLGKLIAFYDDNGISIDGHVEGWF-TDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARA---VTDKPSLLMCKTIIGF 249 (669)
T ss_dssp TCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTT
T ss_pred CCCcEEEEEECCCcEecccccccc-CccHHHHHHHCCCeEEeEECCCCHHHHHHHHHHHHh---cCCCCEEEEEEeEecc
Confidence 997 99999999999998876554 5799999999999999 9999999999999999875 2588999999999999
Q ss_pred CCCC-CCCC---CCCCChHHHHHHHh
Q 022717 184 HHTT-SDDS---TKYRPVDEIEWWRT 205 (293)
Q Consensus 184 gHs~-~Dd~---~~Yr~~~e~~~~~~ 205 (293)
||+. .+++ ..|++++|++.|++
T Consensus 250 G~~~~~~~~~~H~~~~~~ee~~~~~~ 275 (669)
T 2r8o_A 250 GSPNKAGTHDSHGAPLGDAEIALTRE 275 (669)
T ss_dssp TCTTTTTSGGGTSSCCCHHHHHHHHH
T ss_pred CcCCcCCCCcccCCCCCHHHHHHHHH
Confidence 9994 4443 57999999998873
No 15
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.95 E-value=1.8e-27 Score=240.44 Aligned_cols=164 Identities=22% Similarity=0.199 Sum_probs=139.3
Q ss_pred CCCCccccCCCCC-CcccccccccCccHHHHHHHHHhhhcC----------CCceEEEEeCcccccchHHHHHHHHHhhc
Q 022717 37 GRQMPIHYGSNKH-NYFTVSSTIATQLPHAVGAAYALKMDR----------KDACAVTYFGDGGTSEGDFHAALNFSAVT 105 (293)
Q Consensus 37 G~~~~~h~~~~~~-~~~~~~g~lG~~lp~A~G~A~a~k~~~----------~~~~vv~~~GDGa~~~G~~~Eal~~A~~~ 105 (293)
|+-.+.|+..... ++...+|+||+++|.|+|+|+|.++.+ ++++|+|++|||++++|+++|+|++|+.+
T Consensus 107 ~~~~~ghp~~~~~~~~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~i~GDG~~~eG~~~Eal~~A~~~ 186 (675)
T 1itz_A 107 GSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARFNKPDSEIVDHYTYVILGDGCQMEGIANEACSLAGHW 186 (675)
T ss_dssp TCSSCSSCCTTTCTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCeeECCccHHhHHHHHHHHHHHhhhhcccccccccCCCCCEEEEEECHhHhchhHHHHHHHHHHHh
Confidence 4445778875443 455568999999999999999998765 78999999999999999999999999999
Q ss_pred CC-CEEEEEEeCCccccccccCccCcccHHHHHhhcCceEE-EEeCC-CHHHHHHHHHHHHHHhhccCCcEEEEEEeecC
Q 022717 106 EA-PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSI-RVDGN-DALAIYSAVHAAREMAIGEGRPILIEALTYRV 182 (293)
Q Consensus 106 ~l-pvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~-~VdG~-D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~ 182 (293)
+| |+|+||+||+|++++++.... ..++.+++++|||+++ +|||| |++++++++++|.+ ..++|+||+++|+|.
T Consensus 187 ~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~al~~a~~---~~~~P~lI~~~T~kg 262 (675)
T 1itz_A 187 GLGKLIAFYDDNHISIDGDTEIAF-TEDVSTRFEALGWHTIWVKNGNTGYDDIRAAIKEAKA---VTDKPTLIKVTTTIG 262 (675)
T ss_dssp TCTTEEEEEEECSEETTEEGGGTC-CSCHHHHHHHTTCEEEEESCTTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTT
T ss_pred CCCcEEEEEECCCccCCCChhhhc-ChhHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHH---CCCCeEEEEEeeecc
Confidence 99 599999999999998876655 6799999999999999 89999 99999999988875 258899999999999
Q ss_pred CCCCCCCCCC----CCCChHHHHHHH
Q 022717 183 GHHTTSDDST----KYRPVDEIEWWR 204 (293)
Q Consensus 183 ~gHs~~Dd~~----~Yr~~~e~~~~~ 204 (293)
+||+...++. .+.+++|++.++
T Consensus 263 ~G~~~~~~~~~~H~~~~~~e~~~~~~ 288 (675)
T 1itz_A 263 FGSPNKANSYSVHGSALGAKEVEATR 288 (675)
T ss_dssp TTCTTTTTSGGGTSSCCCHHHHHHHH
T ss_pred cCcccccCcccccCCCCCHHHHHHHH
Confidence 9998654433 245667777765
No 16
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=99.95 E-value=1.2e-27 Score=242.07 Aligned_cols=171 Identities=24% Similarity=0.289 Sum_probs=128.1
Q ss_pred HHHcCC--CHHHHHHHhhcCCCCCCCCCCCccccCCCCCCcc-cccccccCccHHHHHHHHHhhhcCC----------Cc
Q 022717 13 LLWRGF--SMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYF-TVSSTIATQLPHAVGAAYALKMDRK----------DA 79 (293)
Q Consensus 13 ~l~~G~--~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~~-~~~g~lG~~lp~A~G~A~a~k~~~~----------~~ 79 (293)
+...|. +.++ +..|+. .|+..+.|+.....+.+ ..+|+||+++|+|+|+|+|.++.+. ++
T Consensus 116 l~l~G~~~~~~~-l~~~r~------~~s~~~ghp~~~~~~gve~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~ 188 (711)
T 3uk1_A 116 LHLTGYDLPIEE-LKNFRQ------LHSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGEALLAAEFNRDDAKIVDH 188 (711)
T ss_dssp HHHHTCSCCHHH-HHTTTS------TTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCC
T ss_pred HHHhCCCCCHHH-HHhhcc------ccCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHHhhcccccccccccCCC
Confidence 444564 4454 454532 24445678766544444 4689999999999999999986543 78
Q ss_pred eEEEEeCcccccchHHHHHHHHHhhcCCC-EEEEEEeCCccccccccCccCcccHHHHHhhcCceEEE-EeCCCHHHHHH
Q 022717 80 CAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIR-VDGNDALAIYS 157 (293)
Q Consensus 80 ~vv~~~GDGa~~~G~~~Eal~~A~~~~lp-vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~-VdG~D~~~v~~ 157 (293)
+|+|++|||++++|+++|+|++|+.++|| +|+|++||+|++++++.... ..|+.+++++|||++++ |||||++++.+
T Consensus 189 ~vv~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dnN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~ 267 (711)
T 3uk1_A 189 HTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWF-HDDTPKRFEAYGWNVIPNVNGHDVDAIDA 267 (711)
T ss_dssp CEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHTTCEEEEEEETTCHHHHHH
T ss_pred eEEEEECCcchhhccHHHHHHHHHHhCCCcEEEEEECCCcccccchhhhc-CCCHHHHHHHcCCcEEEEeCCCCHHHHHH
Confidence 99999999999999999999999999997 99999999999998876654 57999999999999999 89999999999
Q ss_pred HHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCCCCCC
Q 022717 158 AVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYR 195 (293)
Q Consensus 158 a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr 195 (293)
++++|. +.++|+||+++|+|.+||+...++..|.
T Consensus 268 Al~~A~----~~~~P~lI~v~T~kG~G~~~~e~~~~~H 301 (711)
T 3uk1_A 268 AIAKAK----RSDKPSLICCKTRIGNGAATKAGGHDVH 301 (711)
T ss_dssp HHHHHT----TCSSCEEEEEEC----------------
T ss_pred HHHHHH----hCCCCEEEEEccccccCCCCCCCccccc
Confidence 888775 3689999999999999998655544444
No 17
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=99.95 E-value=1.4e-26 Score=233.89 Aligned_cols=182 Identities=25% Similarity=0.296 Sum_probs=143.3
Q ss_pred HHHHHcCC--CHHHHHHHhhcCCCCCCCCCCCccccCCCCCCc-ccccccccCccHHHHHHHHHhhhcCC----------
Q 022717 11 GVLLWRGF--SMQEFANQCFGNKADYGKGRQMPIHYGSNKHNY-FTVSSTIATQLPHAVGAAYALKMDRK---------- 77 (293)
Q Consensus 11 ~~~l~~G~--~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~-~~~~g~lG~~lp~A~G~A~a~k~~~~---------- 77 (293)
+++...|. +.++ +..++. .|+-.+.|+.....+. ...+|++|+++|.|+|+|+|.++.+.
T Consensus 99 a~l~l~G~~~~~~~-l~~~rq------~gs~~~Ghp~~~~~pgv~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~ 171 (690)
T 3m49_A 99 SLLHLSGYDVTMDD-LKNFRQ------WGSKTPGHPEYGHTAGVDATTGPLGQGIATAVGMAMAERHLAAKYNRDAYNIV 171 (690)
T ss_dssp HHHHHTTSSCCHHH-HTTTTC------TTCSSCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCS
T ss_pred HHHHHHCCCCCHHH-HHhhcc------CCCCCCCCCCCCCCCccccCCccccccHHHHHHHHHHHHHhhccccccccccC
Confidence 34444664 4554 444432 3455567887654444 44589999999999999999986542
Q ss_pred CceEEEEeCcccccchHHHHHHHHHhhcCCC-EEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEE-eCCCHHHH
Q 022717 78 DACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRV-DGNDALAI 155 (293)
Q Consensus 78 ~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lp-vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~V-dG~D~~~v 155 (293)
+++|+|++|||++++|+++|+|++|+.++|| +|+|++||+|+|+++..... ..|+.+++++|||++++| ||||++++
T Consensus 172 d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dnN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~v~DG~d~~~l 250 (690)
T 3m49_A 172 DHYTYAICGDGDLMEGVSAEASSLAAHLQLGRLVVLYDSNDISLDGDLNRSF-SESVEDRYKAYGWQVIRVEDGNDIEAI 250 (690)
T ss_dssp CCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSBCSSSBGGGTC-CCCHHHHHHHHTCEEEEESCTTCHHHH
T ss_pred CCeEEEEECchhhhhccHHHHHHHHHHhCCCeEEEEEECCCeecccchhhcc-chhHHHHHHHcCCcEEEEecCCCHHHH
Confidence 7899999999999999999999999999997 99999999999998876543 578999999999999999 99999999
Q ss_pred HHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCCCCCC----ChHHHHHH
Q 022717 156 YSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYR----PVDEIEWW 203 (293)
Q Consensus 156 ~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr----~~~e~~~~ 203 (293)
.+++++|.+ ..++|+||+++|+|..|++...++..|. +.++++..
T Consensus 251 ~~Al~~a~~---~~~~P~lI~v~T~kG~G~~~~~~~~~~Hg~~~~~e~~~~~ 299 (690)
T 3m49_A 251 AKAIEEAKA---DEKRPTLIEVRTTIGFGSPNKSGKSASHGSPLGVEETKLT 299 (690)
T ss_dssp HHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTTSGGGTSSCCCHHHHHHH
T ss_pred HHHHHHHHh---cCCCCEEEEEEeecccccCcccCcccccCCCCCHHHHHHH
Confidence 998877764 2589999999999999998655544332 23555544
No 18
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=99.95 E-value=2.5e-26 Score=231.27 Aligned_cols=186 Identities=23% Similarity=0.251 Sum_probs=141.0
Q ss_pred CCCc---hHHHHHcCC--CHHHHHHHhhcCCCCCCCCCCCccccCCCCCCcc-cccccccCccHHHHHHHHHhhhcCC--
Q 022717 6 SLRE---PGVLLWRGF--SMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYF-TVSSTIATQLPHAVGAAYALKMDRK-- 77 (293)
Q Consensus 6 ~yR~---~~~~l~~G~--~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~~-~~~g~lG~~lp~A~G~A~a~k~~~~-- 77 (293)
.|-+ .+++...|. +.++ +..|+. .|+-.+.|+.....+.+ ..+|+||+++|+|+|+|+|.++.+.
T Consensus 67 GH~s~~lYa~l~l~G~~~~~~~-l~~~r~------~~s~~~ghp~~~~~~gve~~tG~lG~gl~~AvG~AlA~~~~~~~~ 139 (663)
T 3kom_A 67 GHGSMLLYSLLHLTGYDLSIED-IKNFRQ------LHSKTPGHPEYGYTPGVETTTGPLGQGVANAVGMALGEKLLSDRY 139 (663)
T ss_dssp SSCHHHHHHHHHHHTCSCCHHH-HTTTTS------TTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHhCCCCCHHH-HHhhcc------CCCCCCCCCCCCCCCCcccCCcchhhHHHHHHHHHHhHHhhcccc
Confidence 4555 333444564 4444 444532 24445678776544444 4689999999999999999987543
Q ss_pred --------CceEEEEeCcccccchHHHHHHHHHhhcCCC-EEEEEEeCCccccccccCccCcccHHHHHhhcCceEE-EE
Q 022717 78 --------DACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSI-RV 147 (293)
Q Consensus 78 --------~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lp-vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~-~V 147 (293)
+++|+|++|||++++|+++|+|++|+.++|| +|+|++||+|+++++..... ..|+.+++++|||+++ +|
T Consensus 140 ~~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livi~dnN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~v 218 (663)
T 3kom_A 140 NTPDLKVIDHHTYVFLGDGCLMEGVSHEACSLAGTLGLNKLVAFWDDNNISIDGDTKGWF-SDNTPERFRAYGWHVIENV 218 (663)
T ss_dssp CBTTBCSCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECC-----CGGGTC-CCCHHHHHHHTTCEEEEEE
T ss_pred cccccccCCCeEEEEECchhhhhchHHHHHHHHHHhCCCeEEEEEECCCcccccchhhhc-chhHHHHHHHCCCeEEEEE
Confidence 7899999999999999999999999999997 99999999999998876654 5799999999999999 89
Q ss_pred eCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCCCCCC----ChHHHHH
Q 022717 148 DGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYR----PVDEIEW 202 (293)
Q Consensus 148 dG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr----~~~e~~~ 202 (293)
||||++++.+++++|.+ ..++|+||+++|+|.+||+...++..+. +++|++.
T Consensus 219 dG~d~~~l~~al~~A~~---~~~~P~lI~~~T~kg~G~~~~e~~~~~Hg~~l~~e~~~~ 274 (663)
T 3kom_A 219 DGHDFVAIEKAINEAHS---QQQKPTLICCKTVIGFGSPEKAGTASVHGSPLSDQERAS 274 (663)
T ss_dssp ETTCHHHHHHHHHHHHH---CSSSCEEEEEECCTTTTCTTTTTCSSTTSSCCCHHHHHH
T ss_pred cCCCHHHHHHHHHHHHh---cCCCCEEEEEecccccccCCCCCCccccCCCCCHHHHHH
Confidence 99999999998887764 1589999999999999998765443332 3455554
No 19
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=99.95 E-value=2.8e-26 Score=229.74 Aligned_cols=174 Identities=21% Similarity=0.242 Sum_probs=141.0
Q ss_pred CCCc---hHHHHHcCC--CHHHHHHHhhcCCCCCCCCCCCccccCCCCCCcccccccccCccHHHHHHHHHhhhcCC---
Q 022717 6 SLRE---PGVLLWRGF--SMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRK--- 77 (293)
Q Consensus 6 ~yR~---~~~~l~~G~--~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~--- 77 (293)
.|-+ .+++...|. +.++ +..|+. .|+-.+.|+.....+....+|+||+++|.|+|+|+|.++.+.
T Consensus 66 GH~~~~lYa~l~l~G~~~~~~~-l~~~r~------~~s~~~ghp~~~~~g~~~~tG~lG~gl~~AvG~AlA~~~~~~~~n 138 (632)
T 3l84_A 66 GHASALLYSFLHLSGYDLSLED-LKNFRQ------LHSKTPGHPEISTLGVEIATGPLGQGVANAVGFAMAAKKAQNLLG 138 (632)
T ss_dssp GGGHHHHHHHHHHHTCSCCHHH-HTTTTC------TTCSSCSSCCTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcccHHHHHHHHHhCCCCCHHH-HHHHhc------CCCCCCCCCCCCCCCcccCCcchhhHHHHHHHHHHHHHhhccccc
Confidence 3555 445555664 4444 444532 244456788763334445689999999999999999997643
Q ss_pred ----CceEEEEeCcccccchHHHHHHHHHhhcCCC-EEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeCCCH
Q 022717 78 ----DACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDA 152 (293)
Q Consensus 78 ----~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lp-vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~ 152 (293)
+++|+|++|||++++|+++|+|++|+.++|| +|+|++||+|+++++..... ..++.+++++|||++++|||||+
T Consensus 139 ~~~~d~~v~~v~GDG~~~eG~~~Eal~~A~~~~L~~livi~nnN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~vdGhd~ 217 (632)
T 3l84_A 139 SDLIDHKIYCLCGDGDLQEGISYEACSLAGLHKLDNFILIYDSNNISIEGDVGLAF-NENVKMRFEAQGFEVLSINGHDY 217 (632)
T ss_dssp TTTCCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHTTCEEEEEETTCH
T ss_pred cCCCCCeEEEEECCcchhhccHHHHHHHHHHcCCCcEEEEEECCCcccccchhhhc-ChhHHHHHHHcCCeEEEEeeCCH
Confidence 8999999999999999999999999999997 99999999999998876554 57899999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCC
Q 022717 153 LAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDS 191 (293)
Q Consensus 153 ~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~Dd~ 191 (293)
+++.+++++|.+ .++|+||+++|++.+||+...++
T Consensus 218 ~~l~~al~~A~~----~~~P~lI~v~T~kG~G~~~~e~~ 252 (632)
T 3l84_A 218 EEINKALEQAKK----STKPCLIIAKTTIAKGAGELEGS 252 (632)
T ss_dssp HHHHHHHHHHHT----CSSCEEEEEECCTTTTCGGGTTC
T ss_pred HHHHHHHHHHHh----CCCCEEEEEeeEeeecCCCCCCc
Confidence 999998888764 68999999999999999865443
No 20
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=99.94 E-value=1.6e-26 Score=231.83 Aligned_cols=171 Identities=17% Similarity=0.187 Sum_probs=129.2
Q ss_pred cCCCchHHHHHcCCCHHHHHHHhhcCCCCCCCCCCCccccCCCC-CCcccccccccCccHHHHHHHHHhhhcCCCceEEE
Q 022717 5 SSLREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNK-HNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVT 83 (293)
Q Consensus 5 ~~yR~~~~~l~~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~-~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~ 83 (293)
+.||++++.+.+|. .++ +..++. .| +.+.|+.... ......+|++|+++|+|+|+|+|.++++++++|||
T Consensus 78 ~gH~~y~~~~l~G~-~~~-~~~~r~------~~-g~~g~~~~~~s~~~~~~~G~~G~gl~~A~G~AlA~~~~~~~~~Vv~ 148 (621)
T 2o1s_A 78 VGHQAYPHKILTGR-RDK-IGTIRQ------KG-GLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVC 148 (621)
T ss_dssp SSTTCHHHHHTTTT-GGG-GGGTTS------TT-SCCSSCCTTTCTTCCSCCSSSSCHHHHHHHHHHHHHHHTSCCCEEE
T ss_pred CchHHHHHHHHhCC-Hhh-hhcccc------cC-CCCCCCCCCCCCCCccCCcccchHHHHHHHHHHHHHHhCCCCeEEE
Confidence 78999999999997 222 222321 11 1334544322 22333589999999999999999999999999999
Q ss_pred EeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCc---------------------------------
Q 022717 84 YFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRS--------------------------------- 130 (293)
Q Consensus 84 ~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~--------------------------------- 130 (293)
++|||++++|+++|+|++|+.+++|+||||+||+|+++++.+.+...
T Consensus 149 v~GDG~~~~G~~~EaL~~A~~~~~pli~vvnnN~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~p~~~~~~~r 228 (621)
T 2o1s_A 149 VIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKELLKR 228 (621)
T ss_dssp EEETTGGGSHHHHHHHHHHHHHCCSEEEEEEECC----------------------------------------------
T ss_pred EEchhhhhccHHHHHHHHHHhhCCCEEEEEeCCCcccCCCcchHHHHHHhhhcchhHHHHHHHHHHHHhccchHHHHHHH
Confidence 99999999999999999999999999999999999998765432100
Q ss_pred -ccH-------HHHHhhcCceEE-EEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCC
Q 022717 131 -DGA-------VVKGRAYGVRSI-RVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTS 188 (293)
Q Consensus 131 -~d~-------~~~a~a~G~~~~-~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs~~ 188 (293)
.++ ..++++|||+++ +|||+|++++.+++++|.+ .++|++|+++|+|..||+..
T Consensus 229 ~~~~~~~~~~p~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~----~~gP~lI~v~t~kg~G~~~~ 291 (621)
T 2o1s_A 229 TEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRD----LKGPQFLHIMTKKGRGYEPA 291 (621)
T ss_dssp ----------CHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHH----SCSEEEEEEECCCTTCCCCC
T ss_pred HHHHhhhccChhhHHHHCCCeEeeeeCCCCHHHHHHHHHHHHH----cCCCEEEEEEEecccCCChh
Confidence 011 478999999999 9999999999999998875 58999999999999999854
No 21
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=99.93 E-value=3.1e-26 Score=229.99 Aligned_cols=132 Identities=21% Similarity=0.238 Sum_probs=114.6
Q ss_pred cccccccccCccHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccC-
Q 022717 51 YFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFR- 129 (293)
Q Consensus 51 ~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~- 129 (293)
....+|++|+++|+|+|+|+|.|+++++++|||++|||++++|+++|+||+|+.+++|+||||+||+|+++++...+..
T Consensus 118 ~~~~~G~~G~gl~~AvG~AlA~k~~~~~~~Vv~v~GDG~~~~G~~~EaL~~A~~~~~pli~IvnnN~~~i~~~~~~~~~~ 197 (629)
T 2o1x_A 118 DAITVGHASTSLTNALGMALARDAQGKDFHVAAVIGDGSLTGGMALAALNTIGDMGRKMLIVLNDNEMSISENVGAMNKF 197 (629)
T ss_dssp CCSCCSSSSCHHHHHHHHHHHHHHHTCCCCEEEEEETTGGGSHHHHHHHHHHHHHCCSEEEEEEECSBSSSBCCSSHHHH
T ss_pred CCcCCCcccccHhHHHHHHHHHHHhCCCCeEEEEEchhhhhccHHHHHHHHHHhhCCCEEEEEECCCCCCCCChhHHHHH
Confidence 4456899999999999999999999999999999999999999999999999999999999999999999876542100
Q ss_pred ----------------------------------cccH-------H--HHHhhcCceEE-EEeCCCHHHHHHHHHHHHHH
Q 022717 130 ----------------------------------SDGA-------V--VKGRAYGVRSI-RVDGNDALAIYSAVHAAREM 165 (293)
Q Consensus 130 ----------------------------------~~d~-------~--~~a~a~G~~~~-~VdG~D~~~v~~a~~~a~~~ 165 (293)
..++ . +++++|||+++ +|||||++++.+++++|.+
T Consensus 198 ~~~l~~~~~y~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~~~~~p~~~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~- 276 (629)
T 2o1x_A 198 MRGLQVQKWFQEGEGAGKKAVEAVSKPLADFMSRAKNSTRHFFDPASVNPFAAMGVRYVGPVDGHNVQELVWLLERLVD- 276 (629)
T ss_dssp C---------------------------------------------CCCTTGGGTCEEEEEEESSCHHHHHHHHHHHTT-
T ss_pred HHHHhhchhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHhhcCcccchHHHhcCCeEEeeECCcCHHHHHHHHHHHHh-
Confidence 0132 3 78999999999 9999999999998888753
Q ss_pred hhccCCcEEEEEEeecCCCCC
Q 022717 166 AIGEGRPILIEALTYRVGHHT 186 (293)
Q Consensus 166 ~r~~~gP~lIe~~t~R~~gHs 186 (293)
.++|++|++.|++..||+
T Consensus 277 ---~~~P~lI~v~t~kg~G~~ 294 (629)
T 2o1x_A 277 ---LDGPTILHIVTTKGKGLS 294 (629)
T ss_dssp ---SSSEEEEEEECCTTTTCH
T ss_pred ---cCCCEEEEEEEecCCCCC
Confidence 689999999999999987
No 22
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=99.92 E-value=1.7e-25 Score=223.58 Aligned_cols=168 Identities=17% Similarity=0.205 Sum_probs=130.6
Q ss_pred CCcccc--cccccCccHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeC-Cccccc---
Q 022717 49 HNYFTV--SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAIST--- 122 (293)
Q Consensus 49 ~~~~~~--~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN-~~~~~~--- 122 (293)
..++.+ .++||+++|.|+|++++. ++++|||++|||+++++ +++|++|+++++|+++||.|| +|++..
T Consensus 411 ~~~~~~~~~g~~G~~l~~A~Gaala~----~~~~vv~~~GDG~~~~~--~~~l~~a~~~~lp~~~vv~nN~~~~~~~~~~ 484 (603)
T 4feg_A 411 NRHITSNLFATMGVGIPGAIAAKLNY----PERQVFNLAGDGGASMT--MQDLATQVQYHLPVINVVFTNCQYGFIKDEQ 484 (603)
T ss_dssp CEEECCCSSCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHH
T ss_pred CceecCcccccccchhHHHhhHHHhC----CCCcEEEEeccHHHhhh--HHHHHHHHHHCcCeEEEEEECCchHHHHHHH
Confidence 445543 589999999999999986 57899999999999876 566999999999977766666 588632
Q ss_pred -------cccCccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEe---ecCCCCCCCCCCC
Q 022717 123 -------PISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT---YRVGHHTTSDDST 192 (293)
Q Consensus 123 -------~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t---~R~~gHs~~Dd~~ 192 (293)
.........|+.+++++||+++++|+ +++++.+++++|++ .+.+||+|||+.| +|..+|.+.|++.
T Consensus 485 ~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~--~~~~gP~lIev~~~~~~~~~~~~~~~~~~ 560 (603)
T 4feg_A 485 EDTNQNDFIGVEFNDIDFSKIADGVHMQAFRVN--KIEQLPDVFEQAKA--IAQHEPVLIDAVITGDRPLPAEKLRLDSA 560 (603)
T ss_dssp HHHCSSCCCSSBCCCCCHHHHHHHTTCEEEEEC--BGGGHHHHHHHHHH--HTTTSCEEEEEECCCCCCCCTTSCCCCTT
T ss_pred HHhcCCCcccCcCCCCCHHHHHHHCCCeEEEEC--CHHHHHHHHHHHHH--hcCCCcEEEEEEeCCCCCCCcccchhhhh
Confidence 11122345789999999999999998 56678777777762 1478999999999 5667899999999
Q ss_pred CCCChH--HHHHHHhCCCcHHHHHHHHHHCCCCCHHH
Q 022717 193 KYRPVD--EIEWWRTTQDPVTRFRKWIESNGWWNGDI 227 (293)
Q Consensus 193 ~Yr~~~--e~~~~~~~~dPi~~~~~~L~~~g~~~~~~ 227 (293)
.||..+ +.+.|+ ++||+.+|+++|.++|+|++++
T Consensus 561 ~~~~~~~~~~~~~~-~~d~~~~~~~~l~~~g~~~~~~ 596 (603)
T 4feg_A 561 MSSAADIEAFKQRY-EAQDLQPLSTYLKQFGLDDLQH 596 (603)
T ss_dssp TSCHHHHHHHHHHH-TCTTCCCHHHHHHHTTC-----
T ss_pred hhhHHHHHHHHhhC-CcccCCchHHHHHHcCCchhhh
Confidence 998664 556665 5899999999999999999875
No 23
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=99.92 E-value=1.7e-24 Score=223.20 Aligned_cols=193 Identities=18% Similarity=0.159 Sum_probs=149.4
Q ss_pred cCCCc---hHHHHHcCCCHHHHHHHhhcCCCCCCCCCCCccccCCCCCC--cccccccccCccHHHHHHHHHhhh-----
Q 022717 5 SSLRE---PGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHN--YFTVSSTIATQLPHAVGAAYALKM----- 74 (293)
Q Consensus 5 ~~yR~---~~~~l~~G~~~~~~~~~~~g~~~~~~~G~~~~~h~~~~~~~--~~~~~g~lG~~lp~A~G~A~a~k~----- 74 (293)
..|-+ .+++...|.-.++-|..|+.- ..+.+++.|+.....+ +...+|++|.+++.|+|+|++.|+
T Consensus 140 ~GH~sp~~Ya~~~l~Gr~~~e~l~~fRq~----~~~~gl~~~p~~~~~p~~~~~~tG~~G~g~s~AiG~A~a~~~l~~~~ 215 (886)
T 2qtc_A 140 QGHISPGVYARAFLEGRLTQEQLDNFRQE----VHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRG 215 (886)
T ss_dssp CGGGHHHHHHHHHHTTSSCHHHHTTBTCC----TTSSCBCSSCCTTTSTTTCCCCCCSTTHHHHHHHHHHHHHHHHHHTT
T ss_pred cchhHHHHHHHHHHhCCCCHHHHHhccCC----CCCCCCCCCCCcccCCCcccccccccCccHHHHHHHHHHhhhhcccc
Confidence 34555 455667886555556666432 1245667776543322 344689999999999999999998
Q ss_pred --cCCCceEEEEeCcccccchHHHHHHHHHhhcCCC-EEEEEEeCCccccccccCcc-CcccHHHHHhhcCceEEEE---
Q 022717 75 --DRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQF-RSDGAVVKGRAYGVRSIRV--- 147 (293)
Q Consensus 75 --~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lp-vi~vi~NN~~~~~~~~~~~~-~~~d~~~~a~a~G~~~~~V--- 147 (293)
++.+++|+|++|||++++|+++|+||+|+.++|+ +||||+||++++++++.... ...++.++++++||++++|
T Consensus 216 ~~~~~~~~v~aviGDG~l~eG~~~EAl~~A~~~~L~nli~Vvn~N~~si~~~v~~~~~~~~~l~~~~~~~G~~~~~v~~g 295 (886)
T 2qtc_A 216 LKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVIKVMWG 295 (886)
T ss_dssp SCCCTTCCEEEEEETGGGGSHHHHTTHHHHHHTTCTTEEEEEEECSBCSSSBSCTTSCHHHHHHHHHHHTTCEEEEECBC
T ss_pred cccCCCCEEEEEECCccccccchHHHHHHHHHcCCCcEEEEEECCCcccCCCccccccccHHHHHHHHhCCCCEEEEecc
Confidence 7789999999999999999999999999999995 99999999999998876532 3467899999999999998
Q ss_pred ------------------------------------------------------------------eCCCHHHHHHHHHH
Q 022717 148 ------------------------------------------------------------------DGNDALAIYSAVHA 161 (293)
Q Consensus 148 ------------------------------------------------------------------dG~D~~~v~~a~~~ 161 (293)
||||+.+|++++++
T Consensus 296 ~~~~~ll~~~~~~~l~~~~~~~~d~~~q~~~~~~g~~~r~~~F~~~~~~~~l~~~~~d~~i~~l~~dGhD~~~l~~a~~~ 375 (886)
T 2qtc_A 296 SRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKK 375 (886)
T ss_dssp TTHHHHHHHCSSCHHHHHHHHCCHHHHHHHTTSCHHHHHHHTSTTSHHHHTTTTTCCHHHHHTCCBGGGCHHHHHHHHHH
T ss_pred hhHHHHHccCCchHHHHHHHhccchhhhhhhhccchHHHHhhcccchHHHHHHhhcChhhHhhcccCCCCHHHHHHHHHH
Confidence 79999999999999
Q ss_pred HHHHhhccCCcEEEEEEeecCCCCCC--CCCCC----CCCChHHHHHHH
Q 022717 162 AREMAIGEGRPILIEALTYRVGHHTT--SDDST----KYRPVDEIEWWR 204 (293)
Q Consensus 162 a~~~~r~~~gP~lIe~~t~R~~gHs~--~Dd~~----~Yr~~~e~~~~~ 204 (293)
|.+. .++|++|+++|++.+||+. .++.. .|++.++++.|+
T Consensus 376 A~~~---~~~PtlI~~~T~KG~G~~~~~e~~~~~H~~~~l~~~~~~~~r 421 (886)
T 2qtc_A 376 AQET---KGKATVILAHTIKGYGMGDAAKGKNIAHQVKKMNMDGVRHIR 421 (886)
T ss_dssp HHHC---CSSCEEEEEECCTTTTCTTCC-------------CHHHHHHH
T ss_pred HHHc---CCCCEEEEEeeeeccccchhhcCCccccCCCCCCHHHHHHHH
Confidence 9863 3689999999999999973 22222 277788888886
No 24
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=99.74 E-value=6.4e-18 Score=168.39 Aligned_cols=157 Identities=17% Similarity=0.184 Sum_probs=116.9
Q ss_pred CCHHHHHHHhhcCCCC---CCCCCCCc-----cccC-CCCCCcccc--cccccCccHHHHHHHHHhhhcCCCceEEEEeC
Q 022717 18 FSMQEFANQCFGNKAD---YGKGRQMP-----IHYG-SNKHNYFTV--SSTIATQLPHAVGAAYALKMDRKDACAVTYFG 86 (293)
Q Consensus 18 ~~~~~~~~~~~g~~~~---~~~G~~~~-----~h~~-~~~~~~~~~--~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~G 86 (293)
+++..++..+....++ ...+.|.+ .++. ....+++.+ .|+||+++|.|+|+++|. ++++|+|++|
T Consensus 364 ~~~~~~~~~l~~~l~~~~ivv~d~G~~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~AiGaala~----~~~~vv~i~G 439 (590)
T 1v5e_A 364 LQFYQVYNAINNHADEDAIYSIDVGNSTQTSIRHLHMTPKNMWRTSPLFATMGIAIPGGLGAKNTY----PDRQVWNIIG 439 (590)
T ss_dssp CCHHHHHHHHHHHSCTTCEEEECSSHHHHGGGGTCCCCTTSEEECCCSSCCTTCHHHHHHHHHHHC----TTSCEEEEEE
T ss_pred cCHHHHHHHHHhhCCCCCEEEECCchHHHHHHHhcccCCCCeEEcCCCCCcccChHHHHHHHHHhC----CCCeEEEEEe
Confidence 6777887777654432 11233221 1222 123445543 689999999999999996 5789999999
Q ss_pred cccccchHHHHHHHHHhhcCCCEEEE-EEeCCccccccccCc---------cCcccHHHHHhhcCceEEEEeCCCHHHHH
Q 022717 87 DGGTSEGDFHAALNFSAVTEAPVIFI-CRNNGWAISTPISDQ---------FRSDGAVVKGRAYGVRSIRVDGNDALAIY 156 (293)
Q Consensus 87 DGa~~~G~~~Eal~~A~~~~lpvi~v-i~NN~~~~~~~~~~~---------~~~~d~~~~a~a~G~~~~~VdG~D~~~v~ 156 (293)
||+++++ .++|++|+++++|+++| ++||+|++....+.. ....|+.++|++||+++++|+ +++++.
T Consensus 440 DG~~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~q~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~ 515 (590)
T 1v5e_A 440 DGAFSMT--YPDVVTNVRYNMPVINVVFSNTEYAFIKNKYEDTNKNLFGVDFTDVDYAKIAEAQGAKGFTVS--RIEDMD 515 (590)
T ss_dssp HHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCTTGGGTTSSSCCSCCCCCCCCCCHHHHHHHTTSEEEEEC--BHHHHH
T ss_pred chHHhch--HHHHHHHHHhCCCCEEEEEECCchHHHHHHHHHhcCCCccccCCCCCHHHHHHHcCCEEEEEC--CHHHHH
Confidence 9999875 57899999999995555 455589887543221 234689999999999999998 689999
Q ss_pred HHHHHHHHHhhccCCcEEEEEEeecCC
Q 022717 157 SAVHAAREMAIGEGRPILIEALTYRVG 183 (293)
Q Consensus 157 ~a~~~a~~~~r~~~gP~lIe~~t~R~~ 183 (293)
+++++|++..|+ ++|+|||+.|+|..
T Consensus 516 ~al~~a~~~~~~-~gp~liev~~~~~~ 541 (590)
T 1v5e_A 516 RVMAEAVAANKA-GHTVVIDCKITQDR 541 (590)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEECCSCC
T ss_pred HHHHHHHHhcCC-CCCEEEEEEecccc
Confidence 999999876554 88999999998753
No 25
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=99.72 E-value=6e-18 Score=169.31 Aligned_cols=121 Identities=20% Similarity=0.191 Sum_probs=99.3
Q ss_pred cccccCccHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEE-EEEeCCcccccccc--------
Q 022717 55 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIF-ICRNNGWAISTPIS-------- 125 (293)
Q Consensus 55 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~-vi~NN~~~~~~~~~-------- 125 (293)
+|++|+++|.|+|+++|. ++++|||++|||+++++ .++|++|+++++|+++ |++||+|++....+
T Consensus 441 ~G~~G~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~~ 514 (616)
T 2pan_A 441 AGPLGWTIPAALGVCAAD----PKRNVVAISGDFDFQFL--IEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYC 514 (616)
T ss_dssp TCCTTCHHHHHHHHHHHC----TTCEEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHGGGGTCCCS
T ss_pred cccccchHHHHHHHHHhC----CCCcEEEEEcchhhhCC--HHHHHHHHHhCCCeEEEEEECCcchHHHHHHHHhcCCcc
Confidence 589999999999999996 57899999999999875 4679999999999655 55555688753211
Q ss_pred ------C--ccC----cccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCC
Q 022717 126 ------D--QFR----SDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 183 (293)
Q Consensus 126 ------~--~~~----~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~ 183 (293)
. ... ..|+.+++++||+++++|+ +++++.+++++|++++|+.++|+|||+.|+|..
T Consensus 515 ~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~~~~~~gp~lIev~~~~~~ 582 (616)
T 2pan_A 515 VQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVF--KPEDIAPAFEQAKALMAQYRVPVVVEVILERVT 582 (616)
T ss_dssp CBCCCCCTTCGGGTTCCCCHHHHHHHTTCEEEEEC--SGGGHHHHHHHHHHHHHHHCSCEEEEEEBCSCC
T ss_pred ccccccccccccCCCCCCCHHHHHHHcCCeEEEEC--CHHHHHHHHHHHHhhcccCCCcEEEEEEecccc
Confidence 0 011 2689999999999999997 688999999999987777789999999998764
No 26
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=99.72 E-value=2.6e-17 Score=167.80 Aligned_cols=140 Identities=20% Similarity=0.211 Sum_probs=118.5
Q ss_pred CccccCCCCCCcccccccccCccHHHHHHHHHhhhcCCCceEEEEeCcccccchH---HHHHHHHHhhcCC-CEEEEEEe
Q 022717 40 MPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGD---FHAALNFSAVTEA-PVIFICRN 115 (293)
Q Consensus 40 ~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~---~~Eal~~A~~~~l-pvi~vi~N 115 (293)
.++|+.....+....+|+||++++.|+|+|+ .+++.+|+|++|||+.++|. .||+.+++..+++ ++|.|+++
T Consensus 159 ~pgHp~~~tpGve~~tG~LGqGls~AvG~A~----~~~~~~v~~~~GDGe~e~GsLAg~wea~~~~~~~~l~nl~~i~D~ 234 (845)
T 3ahc_A 159 IPSHFAPETPGSIHEGGELGYALSHAYGAVM----NNPSLFVPCIIGDGEAETGPLATGWQSNKLVNPRTDGIVLPILHL 234 (845)
T ss_dssp BCSSCCTTSTTCSCCCSSTTCHHHHHHHHHT----TCTTCEEEEEEETTGGGSHHHHHHGGGGGSCCTTTSCEEEEEEEE
T ss_pred CCCCCCCCCCCeecCCCCccchHhHHhhhhh----cCCCCeEEEEECCCchhhhcchhhhHHhhhhhhhcCCCEEEEEEC
Confidence 7889854333444568999999999999995 45788999999999999999 9999999999999 59999999
Q ss_pred CCccccccccCc-cCcccHHHHHhhcCceEE-EEeC-C--CHHHHHHHHHHHHHH-----------hhc--cCCc--EEE
Q 022717 116 NGWAISTPISDQ-FRSDGAVVKGRAYGVRSI-RVDG-N--DALAIYSAVHAAREM-----------AIG--EGRP--ILI 175 (293)
Q Consensus 116 N~~~~~~~~~~~-~~~~d~~~~a~a~G~~~~-~VdG-~--D~~~v~~a~~~a~~~-----------~r~--~~gP--~lI 175 (293)
|+++|+.++... .+..++.+++++|||.++ .||| + |++++..++.+|++. +|+ .++| ++|
T Consensus 235 N~~~i~g~t~l~~~~~e~l~~rf~a~Gw~v~~~vdG~~~~D~~~i~~a~~~al~~~~~~i~~i~~~A~~~~~~kP~w~~I 314 (845)
T 3ahc_A 235 NGYKIANPTILARISDEELHDFFRGMGYHPYEFVAGFDNEDHMSIHRRFAELFETIFDEICDIKAAAQTDDMTRPFYPML 314 (845)
T ss_dssp CSBSSSSBCHHHHSCHHHHHHHHHHTTEEEEEEECSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCEEEE
T ss_pred CCCcCCCCccccccCcHHHHHHHHHCCCEEeEEeCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCeEE
Confidence 999999888633 356789999999999999 8999 9 999999888766632 344 3689 999
Q ss_pred EEEeecCC
Q 022717 176 EALTYRVG 183 (293)
Q Consensus 176 e~~t~R~~ 183 (293)
.++|...+
T Consensus 315 i~rT~kG~ 322 (845)
T 3ahc_A 315 IFRTPKGW 322 (845)
T ss_dssp EEECCTTT
T ss_pred EEECcccC
Confidence 99999888
No 27
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=99.71 E-value=1.2e-17 Score=165.40 Aligned_cols=155 Identities=14% Similarity=0.149 Sum_probs=113.4
Q ss_pred CCCHHHHHHHhhcCCCC---CCCCCC---C-cc-ccC-CCCCCcccc--cccccCccHHHHHHHHHhhhcCCCceEEEEe
Q 022717 17 GFSMQEFANQCFGNKAD---YGKGRQ---M-PI-HYG-SNKHNYFTV--SSTIATQLPHAVGAAYALKMDRKDACAVTYF 85 (293)
Q Consensus 17 G~~~~~~~~~~~g~~~~---~~~G~~---~-~~-h~~-~~~~~~~~~--~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~ 85 (293)
.+++..++..+....+. ...+.| + .. ++. ....+++.. .|+||+++|.|+|+++|.| +++++|+|++
T Consensus 369 ~~~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~g~g~~G~~l~~AiGaa~a~~--~~~~~vv~i~ 446 (563)
T 2uz1_A 369 ALHPFHASQVIAKHVDAGVTVVADGALTYLWLSEVMSRVKPGGFLCHGYLGSMGVGFGTALGAQVADL--EAGRRTILVT 446 (563)
T ss_dssp SCCHHHHHHHHHTTCSTTEEEEECSSHHHHHHHHHHTTSCCSEEECCCTTCCTTTHHHHHHHHHHHHH--HHTCEEEEEE
T ss_pred CcCHHHHHHHHHHhCCCCcEEEEcCchHHHHHHHhccccCCCeEECCCCCccccChHHHHHHHHHHhh--CCCCeEEEEE
Confidence 46677788877655432 112222 1 11 121 223445543 5899999999999999986 5678999999
Q ss_pred CcccccchHHHHHHHHHhhcCCCEE-EEEEeCCcccccccc-------Cc----cCcccHHHHHhhcCceEEEEeCCCHH
Q 022717 86 GDGGTSEGDFHAALNFSAVTEAPVI-FICRNNGWAISTPIS-------DQ----FRSDGAVVKGRAYGVRSIRVDGNDAL 153 (293)
Q Consensus 86 GDGa~~~G~~~Eal~~A~~~~lpvi-~vi~NN~~~~~~~~~-------~~----~~~~d~~~~a~a~G~~~~~VdG~D~~ 153 (293)
|||+++++ .++|++|+++++|++ +|++||+|++....+ .. ....|+.+++++||+++++|+ +++
T Consensus 447 GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~ 522 (563)
T 2uz1_A 447 GDGSVGYS--IGEFDTLVRKQLPLIVIIMNNQSWGATLHFQQLAVGPNRVTGTRLENGSYHGVAAAFGADGYHVD--SVE 522 (563)
T ss_dssp EHHHHGGG--TTHHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCTTCCCSCBCCCCCHHHHHHHTTCEEEEEC--SHH
T ss_pred ccHHHhCC--HHHHHHHHHhCCCeEEEEEeCCcchHHHHHHHHhcCCCcccCCcCCCCCHHHHHHHcCCeEEEeC--CHH
Confidence 99999876 457999999999955 555566788865321 11 134689999999999999997 788
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEeec
Q 022717 154 AIYSAVHAAREMAIGEGRPILIEALTYR 181 (293)
Q Consensus 154 ~v~~a~~~a~~~~r~~~gP~lIe~~t~R 181 (293)
++.+++++|++ .++|+|||+.|++
T Consensus 523 ~l~~al~~a~~----~~gp~liev~~~~ 546 (563)
T 2uz1_A 523 SFSAALAQALA----HNRPACINVAVAL 546 (563)
T ss_dssp HHHHHHHHHHH----SSSCEEEEEECCS
T ss_pred HHHHHHHHHHH----CCCCEEEEEEecc
Confidence 99998888875 6899999999974
No 28
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=99.71 E-value=1.5e-17 Score=165.69 Aligned_cols=154 Identities=18% Similarity=0.164 Sum_probs=113.4
Q ss_pred CCHHHHHHHhhcCCCC---CCCCCCCc-----ccc-CCCCCCcccc--cccccCccHHHHHHHHHhhhcCCCceEEEEeC
Q 022717 18 FSMQEFANQCFGNKAD---YGKGRQMP-----IHY-GSNKHNYFTV--SSTIATQLPHAVGAAYALKMDRKDACAVTYFG 86 (293)
Q Consensus 18 ~~~~~~~~~~~g~~~~---~~~G~~~~-----~h~-~~~~~~~~~~--~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~G 86 (293)
+++..++..+....+. ...+.|.+ .++ .....+++.+ .|+||+++|.|+|+++|. ++++|+|++|
T Consensus 375 l~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~~~~g~g~mG~~l~~AiGaala~----~~~~vv~i~G 450 (589)
T 2pgn_A 375 ASMFRAMAEVRKVQRPEDIIVTDIGNHTLPMFGGAILQRPRRLVTSMAEGILGCGFPMALGAQLAE----PNSRVFLGTG 450 (589)
T ss_dssp CCHHHHHHHHHHTCCTTCEEEECSSTTHHHHHHHCCCSSTTCEESCTTTCCTTCHHHHHHHHHHHC----TTSCEEEEEE
T ss_pred cCHHHHHHHHHHhCCCCCEEEEcCchHHHHHHHhcccCCCCcEECCCCcchhhhHHHHHHHHHHhC----CCCcEEEEEe
Confidence 6777788777655432 11233322 122 2233456654 589999999999999996 5789999999
Q ss_pred cccccchHHHHHHHHHhhcCCCEEE-EEEeCCcccccccc---------CccCcccHHHHHhhcCceEEEEeCCCHHHHH
Q 022717 87 DGGTSEGDFHAALNFSAVTEAPVIF-ICRNNGWAISTPIS---------DQFRSDGAVVKGRAYGVRSIRVDGNDALAIY 156 (293)
Q Consensus 87 DGa~~~G~~~Eal~~A~~~~lpvi~-vi~NN~~~~~~~~~---------~~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~ 156 (293)
||+|+++ .++|++|+++++|+++ |++||+|++....+ ......|+.+++++||+++++|+ +++++.
T Consensus 451 DG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~ 526 (589)
T 2pgn_A 451 DGALYYH--FNEFRVAVEHKLPVITMVFTNESYGANWTLMNHQFGQNNWTEFMNPDWVGIAKAFGAYGESVR--ETGDIA 526 (589)
T ss_dssp HHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHHHHHHSSCCSCBCCCCCHHHHHHHHTCEEEECT--TTCCHH
T ss_pred eHHHHhh--HHHHHHHHHhCCCeEEEEEECCCcccchHHHHhhcCCCccccCCCCCHHHHHHHCCCeEEEEC--CHHHHH
Confidence 9999875 4789999999999555 55555688765321 22335799999999999999998 566888
Q ss_pred HHHHHHHHHhhccCCcEEEEEEeecCC
Q 022717 157 SAVHAAREMAIGEGRPILIEALTYRVG 183 (293)
Q Consensus 157 ~a~~~a~~~~r~~~gP~lIe~~t~R~~ 183 (293)
++++++++ .++|+|||+.|+|..
T Consensus 527 ~al~~a~~----~~gp~liev~~~~~~ 549 (589)
T 2pgn_A 527 GALQRAID----SGKPALIEIPVSKTQ 549 (589)
T ss_dssp HHHHHHHH----HCSCEEEEEECCSSS
T ss_pred HHHHHHHh----CCCCEEEEEEecCCC
Confidence 88888875 589999999998764
No 29
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=99.70 E-value=1.3e-17 Score=163.78 Aligned_cols=152 Identities=19% Similarity=0.277 Sum_probs=109.2
Q ss_pred CCHHHHHHHhhcCCCC---CCCCCCCc-----cccCC-CCCCcccc-cccccCccHHHHHHHHHhhhcCCCceEEEEeCc
Q 022717 18 FSMQEFANQCFGNKAD---YGKGRQMP-----IHYGS-NKHNYFTV-SSTIATQLPHAVGAAYALKMDRKDACAVTYFGD 87 (293)
Q Consensus 18 ~~~~~~~~~~~g~~~~---~~~G~~~~-----~h~~~-~~~~~~~~-~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GD 87 (293)
+++..++..+....+. ...+.+.+ .++.. ....++.+ .|+||+++|.|+|+++|. ++++|||++||
T Consensus 353 ~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~~~~gg~~G~~l~~A~G~a~a~----~~~~vv~~~GD 428 (528)
T 1q6z_A 353 LHPETVFDTLNDMAPENAIYLNESTSTTAQMWQRLNMRNPGSYYFCAAGGLGFALPAAIGVQLAE----PERQVIAVIGD 428 (528)
T ss_dssp BCHHHHHHHHHHHSCTTCEEEEECTTSHHHHHHHCCCCSSSCEEECTTCCTTSHHHHHHHHHHHC----TTSCEEEEEEH
T ss_pred cCHHHHHHHHHhhCCCCeEEEECCcccHHHHHHhccccCCCcEECCCCccccchHHHHHHHHHhC----CCCcEEEEECC
Confidence 5677777766554432 11222211 12222 23344443 389999999999999996 46789999999
Q ss_pred ccccchHHHHHHHHHhhcCCCEEEEEEeC-CccccccccC----------ccCcccHHHHHhhcCceEEEEeCCCHHHHH
Q 022717 88 GGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPISD----------QFRSDGAVVKGRAYGVRSIRVDGNDALAIY 156 (293)
Q Consensus 88 Ga~~~G~~~Eal~~A~~~~lpvi~vi~NN-~~~~~~~~~~----------~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~ 156 (293)
|+++++ +++|++|+++++|+++||.|| +|++.+..+. .....|+.+++++||+++++|+ +.+++.
T Consensus 429 G~~~~~--~~~l~~a~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~ 504 (528)
T 1q6z_A 429 GSANYS--ISALWTAAQYNIPTIFVIMNNGTYGALRWFAGVLEAENVPGLDVPGIDFRALAKGYGVQALKAD--NLEQLK 504 (528)
T ss_dssp HHHTTT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCCSCCSCBCCCCCHHHHHHHHTCEEEEES--SHHHHH
T ss_pred cHHHhh--HHHHHHHHHhCCCeEEEEEeCCcchHhHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCeEEEeC--CHHHHH
Confidence 999977 678999999999966666555 6888643211 1134689999999999999998 567887
Q ss_pred HHHHHHHHHhhccCCcEEEEEEeec
Q 022717 157 SAVHAAREMAIGEGRPILIEALTYR 181 (293)
Q Consensus 157 ~a~~~a~~~~r~~~gP~lIe~~t~R 181 (293)
++++++++ .++|+|||+.|+|
T Consensus 505 ~al~~a~~----~~gp~liev~~~~ 525 (528)
T 1q6z_A 505 GSLQEALS----AKGPVLIEVSTVS 525 (528)
T ss_dssp HHHHHHHT----CSSCEEEEEEBCC
T ss_pred HHHHHHHH----CCCcEEEEEEecC
Confidence 77777653 6899999999975
No 30
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=99.70 E-value=1.6e-17 Score=164.77 Aligned_cols=153 Identities=16% Similarity=0.153 Sum_probs=110.4
Q ss_pred CCHHHHHHHhhcCCCC---CCCCCCCc-----cccC-CCCCCcccc--cccccCccHHHHHHHHHhhhcCCCceEEEEeC
Q 022717 18 FSMQEFANQCFGNKAD---YGKGRQMP-----IHYG-SNKHNYFTV--SSTIATQLPHAVGAAYALKMDRKDACAVTYFG 86 (293)
Q Consensus 18 ~~~~~~~~~~~g~~~~---~~~G~~~~-----~h~~-~~~~~~~~~--~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~G 86 (293)
+++..++..+....+. ...+.|.. .++. ..+.+++.. .++||+++|.|+|+++|. ++++|+|++|
T Consensus 371 l~~~~v~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~g~g~mG~~l~~AiGaala~----~~~~vv~i~G 446 (566)
T 1ozh_A 371 LHPLRIVRAMQDIVNSDVTLTVDMGSFHIWIARYLYTFRARQVMISNGQQTMGVALPWAIGAWLVN----PERKVVSVSG 446 (566)
T ss_dssp BCHHHHHHHHHHHCCTTEEEEECSSHHHHHHHHTGGGCCCSEEECCCTTCCTTCHHHHHHHHHHHS----TTSEEEEEEE
T ss_pred cCHHHHHHHHHHhCCCCCEEEEcCcHHHHHHHHhcccCCCCeEEeCCCcccccchHHHHHHHHHhC----CCCCEEEEEc
Confidence 5667777766544332 12233321 1221 223445443 589999999999999996 5789999999
Q ss_pred cccccchHHHHHHHHHhhcCCCEEEEE-EeCCcccccccc---------CccCcccHHHHHhhcCceEEEEeCCCHHHHH
Q 022717 87 DGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS---------DQFRSDGAVVKGRAYGVRSIRVDGNDALAIY 156 (293)
Q Consensus 87 DGa~~~G~~~Eal~~A~~~~lpvi~vi-~NN~~~~~~~~~---------~~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~ 156 (293)
||+++++ .++|++|+++++|+++|| +||+|++....+ ......|+.+++++||+++++|+ +++++.
T Consensus 447 DG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~ 522 (566)
T 1ozh_A 447 DGGFLQS--SMELETAVRLKANVLHLIWVDNGYNMVAIQEEKKYQRLSGVEFGPMDFKAYAESFGAKGFAVE--SAEALE 522 (566)
T ss_dssp HHHHHHH--TTHHHHHHHHTCCEEEEEEECSBCHHHHHHHHHHHSSCCSCBCCCCCHHHHHHTTTSEEEECC--SGGGHH
T ss_pred ChHHhcc--HHHHHHHHHhCCCcEEEEEECCchhHHHHHHHHhcCCCccCcCCCCCHHHHHHHcCCeEEEeC--CHHHHH
Confidence 9999864 456999999999966555 555688764321 12334799999999999999998 677888
Q ss_pred HHHHHHHHHhhccCCcEEEEEEeecC
Q 022717 157 SAVHAAREMAIGEGRPILIEALTYRV 182 (293)
Q Consensus 157 ~a~~~a~~~~r~~~gP~lIe~~t~R~ 182 (293)
+++++|++ .++|+|||+.|+|.
T Consensus 523 ~al~~a~~----~~gp~liev~~~~~ 544 (566)
T 1ozh_A 523 PTLRAAMD----VDGPAVVAIPVDYR 544 (566)
T ss_dssp HHHHHHHH----SSSCEEEEEEBCCT
T ss_pred HHHHHHHh----CCCCEEEEEEeCCC
Confidence 88888875 68999999999763
No 31
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=99.70 E-value=1.9e-17 Score=164.39 Aligned_cols=121 Identities=25% Similarity=0.346 Sum_probs=97.8
Q ss_pred CCcccc--cccccCccHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEE-EEEEeCCccccccc-
Q 022717 49 HNYFTV--SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVI-FICRNNGWAISTPI- 124 (293)
Q Consensus 49 ~~~~~~--~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi-~vi~NN~~~~~~~~- 124 (293)
..++.. .|+||+++|.|+|+++|. ++++|+|++|||+++++ .++|++|+++++|++ +|++||+|++....
T Consensus 427 ~~~~~~~g~g~mG~~l~~AiGaa~a~----~~~~vv~i~GDG~~~~~--~~~L~~a~~~~l~~~ivv~NN~~~~~~~~~~ 500 (573)
T 2iht_A 427 FGFLTSAGCSSFGYGIPAAIGAQMAR----PDQPTFLIAGDGGFHSN--SSDLETIARLNLPIVTVVVNNDTNGLIELYQ 500 (573)
T ss_dssp TSEECCSSSCCTTCHHHHHHHHHHHS----TTSCEEEEEEHHHHHHT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHH
T ss_pred CeEEcCCCCcccccHHHHHHHHHHhC----CCCcEEEEEccHHHHhH--HHHHHHHHHhCCCeEEEEEECCcchhhHHHH
Confidence 445543 589999999999999996 57889999999999875 467999999999955 55556668886532
Q ss_pred --------c--CccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeec
Q 022717 125 --------S--DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 181 (293)
Q Consensus 125 --------~--~~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R 181 (293)
. ......|+.+++++||+++++|+ +.+++.+++++|++ .++|+|||+.|+|
T Consensus 501 ~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~----~~gp~liev~~~~ 561 (573)
T 2iht_A 501 NIGHHRSHDPAVKFGGVDFVALAEANGVDATRAT--NREELLAALRKGAE----LGRPFLIEVPVNY 561 (573)
T ss_dssp HHHHSSCCGGGTBCCCCCHHHHHHHTTCEEEECC--SHHHHHHHHHHHHT----SSSCEEEEEEBCC
T ss_pred HHhcCCCcCccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEECCC
Confidence 1 22334699999999999999997 78888888887764 6899999999987
No 32
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=99.70 E-value=3.5e-17 Score=161.64 Aligned_cols=123 Identities=20% Similarity=0.274 Sum_probs=96.4
Q ss_pred CCccc--ccccccCccHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCE-EEEEEeCCcccccccc
Q 022717 49 HNYFT--VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPV-IFICRNNGWAISTPIS 125 (293)
Q Consensus 49 ~~~~~--~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpv-i~vi~NN~~~~~~~~~ 125 (293)
.+++. ..|+||+++|.|+|+++|. ++++|||++|||+++++ .++|++|+++++|+ ++|++||+|++....+
T Consensus 397 ~~~~~~~~~g~mG~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~nN~~~g~~~~~~ 470 (549)
T 3eya_A 397 RRLLGSFNHGSMANAMPQALGAQATE----PERQVVAMCGDGGFSML--MGDFLSVVQMKLPVKIVVFNNSVLGFVAMEM 470 (549)
T ss_dssp CEEECCTTTCCTTCHHHHHHHHHHHS----TTSCEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCCCC----
T ss_pred CcEEeCCCCchhhhHHHHHHHHHHhC----CCCcEEEEEccchhhcc--HHHHHHHHHhCCCeEEEEEeCCccHHHHHHH
Confidence 44554 3589999999999999986 57899999999999765 56799999999995 5556666787643211
Q ss_pred ---------CccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCC
Q 022717 126 ---------DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 183 (293)
Q Consensus 126 ---------~~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~ 183 (293)
......|+.+++++||+++++|+ +++++.++++++++ .++|+|||+.|.+..
T Consensus 471 ~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~----~~gp~liev~~~~~~ 531 (549)
T 3eya_A 471 KAGGYLTDGTELHDTNFARIAEACGITGIRVE--KASEVDEALQRAFS----IDGPVLVDVVVAKEE 531 (549)
T ss_dssp --------CCBCCCCCHHHHHHHTTSEEEEEC--SGGGHHHHHHHHHH----SSSCEEEEEEBCCCC
T ss_pred HhcCCCCcCCcCCCCCHHHHHHHcCCcEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEecccc
Confidence 11234699999999999999997 67788888888775 689999999998753
No 33
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=99.70 E-value=4.8e-17 Score=161.21 Aligned_cols=153 Identities=18% Similarity=0.145 Sum_probs=113.1
Q ss_pred CCHHHHHHHhhcCCCC---CCCCCC----CccccCCC-CCCccc--ccccccCccHHHHHHHHHhhhcCCCceEEEEeCc
Q 022717 18 FSMQEFANQCFGNKAD---YGKGRQ----MPIHYGSN-KHNYFT--VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGD 87 (293)
Q Consensus 18 ~~~~~~~~~~~g~~~~---~~~G~~----~~~h~~~~-~~~~~~--~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GD 87 (293)
+++..++..+....+. ...+.| ...|+..+ ..+++. ..++||+++|.|+|+++|. ++++|+|++||
T Consensus 365 ~~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~~g~~G~~l~~A~G~ala~----~~~~vv~i~GD 440 (568)
T 2wvg_A 365 LVNAEIARQVEALLTPNTTVIAETGDSWFNAQRMKLPNGARVEYEMQWGHIGWSVPAAFGYAVGA----PERRNILMVGD 440 (568)
T ss_dssp CCHHHHHHHHHTTCCTTEEEEECSSHHHHHHHTCCCCTTCEEECCTTTCCTTTHHHHHHHHHHHC----TTSEEEEEEEH
T ss_pred cCHHHHHHHHHHhCCCCCEEEEcCcHHHHHHhhcccCCCCeEEeCCCcchhhhHHHHHHHHHHhC----CCCcEEEEEcC
Confidence 5677788877655443 112222 12233332 344553 3689999999999999996 57899999999
Q ss_pred ccccchHHHHHHHHHhhcCCCE-EEEEEeCCccccccccC----ccCcccHHHHHhhcCc---------eEEEEeCCCHH
Q 022717 88 GGTSEGDFHAALNFSAVTEAPV-IFICRNNGWAISTPISD----QFRSDGAVVKGRAYGV---------RSIRVDGNDAL 153 (293)
Q Consensus 88 Ga~~~G~~~Eal~~A~~~~lpv-i~vi~NN~~~~~~~~~~----~~~~~d~~~~a~a~G~---------~~~~VdG~D~~ 153 (293)
|+++++ .++|++|.++++|+ ++|++||+|++...... .....|+.+++++||+ ++++|+ +.+
T Consensus 441 Gs~~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~~~~~v~--~~~ 516 (568)
T 2wvg_A 441 GSFQLT--AQEVAQMVRLKLPVIIFLINNYGYTIEVMIHDGPYNNIKNWDYAGLMEVFNGNGGYDSGAGKGLKAK--TGG 516 (568)
T ss_dssp HHHHHH--GGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGCCCCCCHHHHHHHHHCTTSSSCCCCEEEEES--BHH
T ss_pred hhHhcc--HHHHHHHHHcCCCcEEEEEECCcceEeeeeccCCCcCCCCCCHHHHHHHhCCCcccccCCcceEEeC--CHH
Confidence 999863 55699999999995 55667778998754432 2234689999999999 899997 688
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEeec
Q 022717 154 AIYSAVHAAREMAIGEGRPILIEALTYR 181 (293)
Q Consensus 154 ~v~~a~~~a~~~~r~~~gP~lIe~~t~R 181 (293)
++.++++++++. .++|+|||+.|+|
T Consensus 517 el~~al~~a~~~---~~gp~liev~~~~ 541 (568)
T 2wvg_A 517 ELAEAIKVALAN---TDGPTLIECFIGR 541 (568)
T ss_dssp HHHHHHHHHHHC---CSSCEEEEEECCT
T ss_pred HHHHHHHHHHhc---CCCcEEEEEEcCc
Confidence 999988888752 2799999999976
No 34
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=99.69 E-value=3.4e-17 Score=165.60 Aligned_cols=123 Identities=20% Similarity=0.270 Sum_probs=98.7
Q ss_pred CCcccc--cccccCccHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCE-EEEEEeCCcccccccc
Q 022717 49 HNYFTV--SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPV-IFICRNNGWAISTPIS 125 (293)
Q Consensus 49 ~~~~~~--~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpv-i~vi~NN~~~~~~~~~ 125 (293)
..++.. .|+||+++|.|+|+++|. ++++|||++|||+|+++ .++|++|+++++|+ |+|++||+|++....+
T Consensus 504 ~~~~~sg~~G~mG~~lpaAiGaalA~----p~~~Vv~i~GDGsf~~~--~~eL~ta~~~~l~v~ivV~NN~~~g~~~~~~ 577 (677)
T 1t9b_A 504 HTFITSGGLGTMGYGLPAAIGAQVAK----PESLVIDIDGDASFNMT--LTELSSAVQAGTPVKILILNNEEQGMVTQWQ 577 (677)
T ss_dssp TCEECCCSSCCTTCHHHHHHHHHHHC----TTSEEEEEEEHHHHHHH--GGGHHHHHHHTCCCEEEEEECSSCHHHHHHH
T ss_pred CeEEeCCCcchhhchHHHHHHHHHhC----CCCeEEEEEeehHHhcc--HHHHHHHHHhCCCeEEEEEeCCCchhhhhhh
Confidence 445543 589999999999999996 68899999999999864 45599999999995 5556666798754221
Q ss_pred -----C-----ccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCC
Q 022717 126 -----D-----QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 183 (293)
Q Consensus 126 -----~-----~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~ 183 (293)
. .....|+.++|++||+++++|+ +++++.++++++++ .++|+|||+.|+|..
T Consensus 578 ~~~~~~~~~~~~~~~~d~~~la~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~lIev~~~~~~ 639 (677)
T 1t9b_A 578 SLFYEHRYSHTHQLNPDFIKLAEAMGLKGLRVK--KQEELDAKLKEFVS----TKGPVLLEVEVDKKV 639 (677)
T ss_dssp HHHSTTCCCSCCCCCCCHHHHHHHTTCEEEEEC--SHHHHHHHHHHHHH----CSSCEEEEEEBCSSC
T ss_pred hhhcCCCcccCcCCCCCHHHHHHHcCCeEEEEC--CHHHHHHHHHHHHH----CCCcEEEEEEecCCc
Confidence 1 1235689999999999999997 78899998888875 589999999999854
No 35
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=99.69 E-value=1.5e-17 Score=164.71 Aligned_cols=157 Identities=13% Similarity=0.070 Sum_probs=112.8
Q ss_pred CCHHHHHHHhhcCCCCC---CCCCCCc----cccCC-CCCCcccc--cccccCccHHHHHHHHHhhhcCCCceEEEEeCc
Q 022717 18 FSMQEFANQCFGNKADY---GKGRQMP----IHYGS-NKHNYFTV--SSTIATQLPHAVGAAYALKMDRKDACAVTYFGD 87 (293)
Q Consensus 18 ~~~~~~~~~~~g~~~~~---~~G~~~~----~h~~~-~~~~~~~~--~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GD 87 (293)
+++..++.++....++. ..+.|.+ .++.. ....++.+ .|+||+++|.|+|+++|.+.++.+++|+|++||
T Consensus 365 ~~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~A~Gaala~~~~~~~~~vv~~~GD 444 (563)
T 2vk8_A 365 LKQEWMWNQLGNFLQEGDVVIAETGTSAFGINQTTFPNNTYGISQVLWGSIGFTTGATLGAAFAAEEIDPKKRVILFIGD 444 (563)
T ss_dssp CCHHHHHHHHTTTCCTTCEEEECTTHHHHHGGGSCCCSSCEEECCTTTCCTTHHHHHHHHHHHHHHHHCTTCCEEEEEEH
T ss_pred cCHHHHHHHHHHhCCCCCEEEECCchHHHHHhhcCcCCCCeEEcccchhhhhhHHHHHHHHHHhCcccCCCCCEEEEEcc
Confidence 67788888876554321 1222211 11211 22345543 689999999999999999887888999999999
Q ss_pred ccccchHHHHHHHHHhhcCCCEEEEE-EeCCcccccccc------CccCcccHHHHHhhcCce---EEEEeCCCHHHHHH
Q 022717 88 GGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS------DQFRSDGAVVKGRAYGVR---SIRVDGNDALAIYS 157 (293)
Q Consensus 88 Ga~~~G~~~Eal~~A~~~~lpvi~vi-~NN~~~~~~~~~------~~~~~~d~~~~a~a~G~~---~~~VdG~D~~~v~~ 157 (293)
|+|+++ +++|++|+++++|+++|| +||+|++..... ......|+.++|++||++ +++|+ +++++.+
T Consensus 445 G~~~~~--~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~v~--~~~el~~ 520 (563)
T 2vk8_A 445 GSLQLT--VQEISTMIRWGLKPYLFVLNNDGYTIQKLIHGPKAQYNEIQGWDHLSLLPTFGAKDYETHRVA--TTGEWDK 520 (563)
T ss_dssp HHHHHH--GGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGGCCCCCCGGGHHHHTTCSSEEEEEEC--BHHHHHH
T ss_pred hHhhcc--HHHHHHHHHcCCCcEEEEEECCcchhhhhhhCCCCCcccCCCCCHHHHHHHhCCCCCcEEEec--CHHHHHH
Confidence 999864 567999999999955555 555698864321 112346899999999999 99998 6888888
Q ss_pred HHH-HHHHHhhccCCcEEEEEEeec
Q 022717 158 AVH-AAREMAIGEGRPILIEALTYR 181 (293)
Q Consensus 158 a~~-~a~~~~r~~~gP~lIe~~t~R 181 (293)
+++ ++++ ..++|+|||+.|++
T Consensus 521 al~~~a~~---~~~~p~liev~~~~ 542 (563)
T 2vk8_A 521 LTQDKSFN---DNSKIRMIEVMLPV 542 (563)
T ss_dssp HHTCTTTT---SCSSEEEEEEECCT
T ss_pred HHHHHHHh---CCCCcEEEEEEeCc
Confidence 877 6553 23579999999975
No 36
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=99.68 E-value=7.1e-17 Score=160.73 Aligned_cols=123 Identities=20% Similarity=0.248 Sum_probs=98.0
Q ss_pred CCcccc--cccccCccHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEE-EEEeCCcccccccc
Q 022717 49 HNYFTV--SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIF-ICRNNGWAISTPIS 125 (293)
Q Consensus 49 ~~~~~~--~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~-vi~NN~~~~~~~~~ 125 (293)
..++.. +|++|+++|.|+|+++|. ++++|||++|||+++++ .++|++|+++++|+++ |++||+|++....+
T Consensus 417 ~~~~~~g~~G~~G~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~ 490 (590)
T 1ybh_A 417 RQWLSSGGLGAMGFGLPAAIGASVAN----PDAIVVDIDGDGSFIMN--VQELATIRVENLPVKVLLLNNQHLGMVMQWE 490 (590)
T ss_dssp TSEECCCSSCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHT--TTHHHHHHHTTCCEEEEEEECSBCHHHHHHH
T ss_pred CeEEeCCCcccccchHHHHHHHHHhC----CCCcEEEEEccchhhcc--HHHHHHHHHhCCCcEEEEEECCcchHHHHHH
Confidence 444443 589999999999999996 57899999999999865 4579999999999554 55666788754211
Q ss_pred ----------Ccc--------CcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCC
Q 022717 126 ----------DQF--------RSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 183 (293)
Q Consensus 126 ----------~~~--------~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~ 183 (293)
... ...|+.+++++||+++++|+ +++++.+++++|++ .++|+|||+.|+|..
T Consensus 491 ~~~~~~~~~~~~~~~p~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~liev~~~~~~ 560 (590)
T 1ybh_A 491 DRFYKANRAHTFLGDPAQEDEIFPNMLLFAAACGIPAARVT--KKADLREAIQTMLD----TPGPYLLDVICPHQE 560 (590)
T ss_dssp HHHSTTCCCSCBCSCGGGTTSCSSCHHHHHHHTTCCEEEEC--BHHHHHHHHHHHHH----SSSCEEEEEECCTTC
T ss_pred HHhcCCccccccccccccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEecCCc
Confidence 101 13689999999999999997 78899888888875 589999999998864
No 37
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=99.68 E-value=4.9e-17 Score=161.09 Aligned_cols=152 Identities=18% Similarity=0.191 Sum_probs=112.1
Q ss_pred CCHHHHHHHhhcCCCC---CCCCCC----CccccCCC-CCCccc--ccccccCccHHHHHHHHHhhhcCCCceEEEEeCc
Q 022717 18 FSMQEFANQCFGNKAD---YGKGRQ----MPIHYGSN-KHNYFT--VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGD 87 (293)
Q Consensus 18 ~~~~~~~~~~~g~~~~---~~~G~~----~~~h~~~~-~~~~~~--~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GD 87 (293)
+++..++..+....+. ...+.| ...++..+ ..+++. ..++||+++|.|+|+++|. ++++|+|++||
T Consensus 361 l~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~A~G~ala~----~~~~vv~~~GD 436 (566)
T 2vbi_A 361 LTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLPRGARVELEMQWGHIGWSVPSAFGNAMGS----QDRQHVVMVGD 436 (566)
T ss_dssp CCHHHHHHHHHHHCCTTEEEEECSSHHHHHHHTCCCCTTCEEECCTTTCCTTTHHHHHHHHHHTC----TTSEEEEEEEH
T ss_pred cCHHHHHHHHHHhcCCCCEEEECCchHHHhhhheECCCCCEEEecCcccchhhHHHHHHHHHHhC----CCCcEEEEEcc
Confidence 5677777776554432 112222 12233322 234553 3689999999999999986 57899999999
Q ss_pred ccccchHHHHHHHHHhhcCCC-EEEEEEeCCccccccccC----ccCcccHHHHHhhcCc-----eEEEEeCCCHHHHHH
Q 022717 88 GGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISD----QFRSDGAVVKGRAYGV-----RSIRVDGNDALAIYS 157 (293)
Q Consensus 88 Ga~~~G~~~Eal~~A~~~~lp-vi~vi~NN~~~~~~~~~~----~~~~~d~~~~a~a~G~-----~~~~VdG~D~~~v~~ 157 (293)
|+++++ .++|++|+++++| +++|++||+|++...... .....|+.+++++||+ ++++|+ +++++.+
T Consensus 437 G~~~~~--~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~v~--~~~el~~ 512 (566)
T 2vbi_A 437 GSFQLT--AQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKAT--TPKELTE 512 (566)
T ss_dssp HHHHHH--GGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGCCCCCCTTTHHHHHHTTTCCCEEEEEC--SHHHHHH
T ss_pred hHHHhh--HHHHHHHHHhCCCcEEEEEECCcceEEEeeccCCccCCCCCCHHHHHHHcCCCCCCccEEEeC--CHHHHHH
Confidence 999864 4569999999999 555666668998765432 2234689999999999 999998 7889998
Q ss_pred HHHHHHHHhhcc-CCcEEEEEEeec
Q 022717 158 AVHAAREMAIGE-GRPILIEALTYR 181 (293)
Q Consensus 158 a~~~a~~~~r~~-~gP~lIe~~t~R 181 (293)
+++++++ . ++|+|||+.|+|
T Consensus 513 al~~a~~----~~~gp~liev~~~~ 533 (566)
T 2vbi_A 513 AIARAKA----NTRGPTLIECQIDR 533 (566)
T ss_dssp HHHHHHH----CCSSCEEEEEECCT
T ss_pred HHHHHHh----cCCCcEEEEEEeCc
Confidence 8888875 4 799999999976
No 38
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=99.68 E-value=6.5e-17 Score=160.33 Aligned_cols=154 Identities=17% Similarity=0.184 Sum_probs=109.1
Q ss_pred CCCHHHHHHHhhcCCCC---CCC--CCCCcc--cc-CCCCCCccc--ccccccCccHHHHHHHHHhhhcCCCceEEEEeC
Q 022717 17 GFSMQEFANQCFGNKAD---YGK--GRQMPI--HY-GSNKHNYFT--VSSTIATQLPHAVGAAYALKMDRKDACAVTYFG 86 (293)
Q Consensus 17 G~~~~~~~~~~~g~~~~---~~~--G~~~~~--h~-~~~~~~~~~--~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~G 86 (293)
.+++..++..+....+. ... |..+.. ++ .....+++. ..++||+++|.|+|+++|. ++++|||++|
T Consensus 376 ~~~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~A~Gaala~----~~~~vv~~~G 451 (570)
T 2vbf_A 376 PLSQDRLWQAVESLTQSNETIVAEQGTSFFGASTIFLKSNSRFIGQPLWGSIGYTFPAALGSQIAD----KESRHLLFIG 451 (570)
T ss_dssp BCCHHHHHHHHHHHCCSSEEEEECTTHHHHHHTTSCCCTTCEEECCTTTCCTTTHHHHHHHHHHHC----TTSEEEEEEE
T ss_pred CcCHHHHHHHHHHhcCCCCEEEEeCCHHHHHHHhcccCCCCeEecCccchhhhhhHHHHHHHHHhC----CCCcEEEEEc
Confidence 36677777776554432 112 221111 11 112234543 3689999999999999996 5789999999
Q ss_pred cccccchHHHHHHHHHhhcCCCE-EEEEEeCCcccccccc------CccCcccHHHHHhhcCce-----EEEEeCCCHHH
Q 022717 87 DGGTSEGDFHAALNFSAVTEAPV-IFICRNNGWAISTPIS------DQFRSDGAVVKGRAYGVR-----SIRVDGNDALA 154 (293)
Q Consensus 87 DGa~~~G~~~Eal~~A~~~~lpv-i~vi~NN~~~~~~~~~------~~~~~~d~~~~a~a~G~~-----~~~VdG~D~~~ 154 (293)
||+++++ .++|++|+++++|+ ++|++||+|++..... ......|+.+++++||++ +++|+ ++++
T Consensus 452 DG~~~~~--~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~v~--~~~e 527 (570)
T 2vbf_A 452 DGSLQLT--VQELGLSIREKLNPICFIINNDGYTVEREIHGPTQSYNDIPMWNYSKLPETFGATEDRVVSKIVR--TENE 527 (570)
T ss_dssp HHHHHHH--GGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGGCCCCCCGGGHHHHTTCCTTTEEEEEEC--BHHH
T ss_pred chhhhcC--HHHHHHHHHcCCCCEEEEEECCchHHHHHHhccCCCccCCCCCCHHHHHHHcCCCcCCcceEEec--CHHH
Confidence 9999864 45699999999995 5556666898865322 112346899999999998 88997 6888
Q ss_pred HHHHHHHHHHHhhccCCcEEEEEEeec
Q 022717 155 IYSAVHAAREMAIGEGRPILIEALTYR 181 (293)
Q Consensus 155 v~~a~~~a~~~~r~~~gP~lIe~~t~R 181 (293)
+.++++++. ++.++|+|||+.|+|
T Consensus 528 l~~al~~a~---~~~~~p~liev~~~~ 551 (570)
T 2vbf_A 528 FVSVMKEAQ---ADVNRMYWIELVLEK 551 (570)
T ss_dssp HHHHHHHHH---HCTTSEEEEEEECCT
T ss_pred HHHHHHHHH---hcCCCcEEEEEEcCc
Confidence 888887742 346889999999976
No 39
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=99.67 E-value=5.1e-17 Score=161.04 Aligned_cols=121 Identities=17% Similarity=0.190 Sum_probs=96.9
Q ss_pred CCcccc--cccccCccHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEE-EEEEeCCcccccccc
Q 022717 49 HNYFTV--SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVI-FICRNNGWAISTPIS 125 (293)
Q Consensus 49 ~~~~~~--~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi-~vi~NN~~~~~~~~~ 125 (293)
..++.. .|+||+++|.|+|+|+|. ++++|+|++|||+++ +..++|++|+++++|++ +|++||+|++....+
T Consensus 413 ~~~~~~~~~g~mG~~l~~A~G~ala~----~~~~vv~i~GDG~~~--~~~~~l~ta~~~~l~~~ivv~nN~~~~~~~~~~ 486 (565)
T 2nxw_A 413 AGLMAPGYYAGMGFGVPAGIGAQCVS----GGKRILTVVGDGAFQ--MTGWELGNCRRLGIDPIVILFNNASWEMLRTFQ 486 (565)
T ss_dssp SCEECCTTTCCTTCHHHHHHHHHHHT----TTCCEEEEEEHHHHH--HHGGGGGGHHHHTCCCEEEEEECSBCHHHHHHC
T ss_pred cEEEccCccccccccchHHHHHHHhC----CCCcEEEEEechHHH--hhHHHHHHHHHhCCCCEEEEEECCCCcEEeeec
Confidence 344443 589999999999999996 578999999999998 45677999999999955 555666798864321
Q ss_pred -----CccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcE-EEEEEeec
Q 022717 126 -----DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPI-LIEALTYR 181 (293)
Q Consensus 126 -----~~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~-lIe~~t~R 181 (293)
......|+.++|++||+++++|+ +++++.++++++++ .++|+ |||+.|+|
T Consensus 487 ~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~~liev~~~~ 542 (565)
T 2nxw_A 487 PESAFNDLDDWRFADMAAGMGGDGVRVR--TRAELKAALDKAFA----TRGRFQLIEAMIPR 542 (565)
T ss_dssp TTCGGGBCCCCCHHHHTGGGTSEEEEEC--BHHHHHHHHHHHHH----CCSSCEEEEEECCT
T ss_pred ccCCCCcCCCCCHHHHHHHcCCCEEEeC--CHHHHHHHHHHHHh----cCCCeEEEEEEccc
Confidence 12245699999999999999998 68889888888875 57898 99999975
No 40
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=99.66 E-value=8.2e-17 Score=158.89 Aligned_cols=152 Identities=16% Similarity=0.150 Sum_probs=108.0
Q ss_pred CCHHHHHHHhhcCCCC---CCCCCCCcc----ccC-CCCCCcccc--cccccCccHHHHHHHHHhhhcCCCceEEEEeCc
Q 022717 18 FSMQEFANQCFGNKAD---YGKGRQMPI----HYG-SNKHNYFTV--SSTIATQLPHAVGAAYALKMDRKDACAVTYFGD 87 (293)
Q Consensus 18 ~~~~~~~~~~~g~~~~---~~~G~~~~~----h~~-~~~~~~~~~--~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GD 87 (293)
+++..++..+....+. ...+.|.+. ++. .+..+++.+ .|+||+++|.|+|+++|. ++++|||++||
T Consensus 360 ~~~~~~~~~l~~~l~~~~ivv~d~G~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~A~G~a~a~----~~~~vv~~~GD 435 (552)
T 1ovm_A 360 LTQENFWRTLQTFIRPGDIILADQGTSAFGAIDLRLPADVNFIVQPLWGSIGYTLAAAFGAQTAC----PNRRVIVLTGD 435 (552)
T ss_dssp CCHHHHHHHHHHHCCTTCEEEECTTHHHHHHTTCCCCSSCEEECCTTTCCTTHHHHHHHHHHHHC----TTSCEEEEEEH
T ss_pred cCHHHHHHHHHHhcCCCCEEEECCchHHHHHHhcccCCCCeEEechhhHhhhhHHHHHHHHHHhC----CCCcEEEEECc
Confidence 6677777776544332 112222211 111 122335543 689999999999999996 47899999999
Q ss_pred ccccchHHHHHHHHHhhcCCCEEE-EEEeCCcccccccc------CccCcccHHHHHhhcCc----eEEEEeCCCHHHHH
Q 022717 88 GGTSEGDFHAALNFSAVTEAPVIF-ICRNNGWAISTPIS------DQFRSDGAVVKGRAYGV----RSIRVDGNDALAIY 156 (293)
Q Consensus 88 Ga~~~G~~~Eal~~A~~~~lpvi~-vi~NN~~~~~~~~~------~~~~~~d~~~~a~a~G~----~~~~VdG~D~~~v~ 156 (293)
|+++++ .++|.+|+++++|+++ |++||+|++..... ......|+.+++++||+ ++++|+ +++++.
T Consensus 436 G~~~~~--~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~v~--~~~~l~ 511 (552)
T 1ovm_A 436 GAAQLT--IQELGSMLRDKQHPIILVLNNEGYTVERAIHGAEQRYNDIALWNWTHIPQALSLDPQSECWRVS--EAEQLA 511 (552)
T ss_dssp HHHHHH--TTHHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGGCCCCCCGGGSTTTSCSSCCEEEEEEC--BHHHHH
T ss_pred hHHHhH--HHHHHHHHHhCCCCEEEEEECCCCeEEEeeccCCCCcccCCCCCHHHHHHHhCCCcCCCEEEeC--CHHHHH
Confidence 999854 5669999999999555 55555798864321 11234689999999999 999998 678888
Q ss_pred HHHHHHHHHhhccCCcEEEEEEeec
Q 022717 157 SAVHAAREMAIGEGRPILIEALTYR 181 (293)
Q Consensus 157 ~a~~~a~~~~r~~~gP~lIe~~t~R 181 (293)
+++++++ +.++|+|||+.|++
T Consensus 512 ~al~~a~----~~~gp~liev~~~~ 532 (552)
T 1ovm_A 512 DVLEKVA----HHERLSLIEVMLPK 532 (552)
T ss_dssp HHHHHHT----TCSSEEEEEEECCT
T ss_pred HHHHHHH----hCCCCEEEEEEcCc
Confidence 8777765 46899999999975
No 41
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=99.65 E-value=2.8e-16 Score=155.78 Aligned_cols=115 Identities=18% Similarity=0.163 Sum_probs=93.5
Q ss_pred cccccCccHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCC-c-cccccc--cC----
Q 022717 55 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNG-W-AISTPI--SD---- 126 (293)
Q Consensus 55 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~-~-~~~~~~--~~---- 126 (293)
.|+||+++|.|+|+++| ++++|+|++|||+|++. .++|++|+++++|+++||.||+ | ++.... ..
T Consensus 425 ~g~~G~~l~~AiGaala-----~~~~vv~i~GDGsf~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~~ 497 (568)
T 2c31_A 425 WGVMGIGMGYCVAAAAV-----TGKPVIAVEGDSAFGFS--GMELETICRYNLPVTVIIMNNGGIYKGNEADPQPGVISC 497 (568)
T ss_dssp TTCSSCHHHHHHHHHHH-----HCSCEEEEEEHHHHHTT--GGGHHHHHHTTCCEEEEEEESSBSSCSCCCCSBTTBCCT
T ss_pred CccccccHHHHHHHHhC-----CCCcEEEEEcchHhhcc--HHHHHHHHHhCCCeEEEEEeCchhHHHHHHHhhcCCccc
Confidence 58999999999999998 47889999999999863 4669999999999777777776 3 443211 00
Q ss_pred -ccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecC
Q 022717 127 -QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 182 (293)
Q Consensus 127 -~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~ 182 (293)
.....|+.++|++||+++++|+ +++++.++++++++ .++|+|||+.|+|.
T Consensus 498 ~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~~p~liev~~~~~ 548 (568)
T 2c31_A 498 TRLTRGRYDMMMEAFGGKGYVAN--TPAELKAALEEAVA----SGKPCLINAMIDPD 548 (568)
T ss_dssp TBCCCCCHHHHHHTTTCEEEEES--SHHHHHHHHHHHHH----HTSCEEEEEEBCTT
T ss_pred CcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEeccc
Confidence 0345699999999999999997 78999999988875 58899999999874
No 42
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=99.64 E-value=3.7e-16 Score=154.68 Aligned_cols=116 Identities=15% Similarity=0.092 Sum_probs=93.2
Q ss_pred ccccccCccHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCC-c-cccccc-------
Q 022717 54 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNG-W-AISTPI------- 124 (293)
Q Consensus 54 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~-~-~~~~~~------- 124 (293)
..|+||+++|.|+|+++| ++++|+|++|||+|++. .++|.+|+++++|+++||.||+ | ++....
T Consensus 419 ~~g~~G~~l~~AiGaa~a-----~~~~vv~i~GDGsf~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~ 491 (564)
T 2q28_A 419 TWGVMGIGMGYAIGASVT-----SGSPVVAIEGDSAFGFS--GMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGAP 491 (564)
T ss_dssp TTTCTTCHHHHHHHHHHH-----HCSCEEEEEEHHHHHTT--GGGHHHHHHTTCCEEEEEEECSBSSCSCCCCTTSSCCC
T ss_pred CCCcccchHHHHHHHhhc-----CCCcEEEEEcchHhhcc--HHHHHHHHHhCCCeEEEEEeCchhHHHHHHHHhccCCc
Confidence 368999999999999998 47889999999999764 3569999999999777766665 3 543211
Q ss_pred cC--ccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecC
Q 022717 125 SD--QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 182 (293)
Q Consensus 125 ~~--~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~ 182 (293)
.. .....|+.++|++||+++++|+ +++++.++++++++ .++|+|||+.|+|.
T Consensus 492 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~~p~liev~~~~~ 545 (564)
T 2q28_A 492 SPTDLLHHARYDKLMDAFRGVGYNVT--TTDELRHALTTGIQ----SRKPTIINVVIDPA 545 (564)
T ss_dssp CTTBCCTTCCGGGGGGGGTCEEEEEC--SHHHHHHHHHHHHH----HTSCEEEEEEBCTT
T ss_pred cccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEeccc
Confidence 00 1124689999999999999997 78899999988875 58899999999875
No 43
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=99.60 E-value=2.6e-16 Score=157.09 Aligned_cols=151 Identities=15% Similarity=0.071 Sum_probs=106.6
Q ss_pred CCHHHHHHHhhcCCCC---CCCCCCCcc-----ccCCC--CCCcccc--cccccCccHHHHHHHHHhhhcCCCceEEEEe
Q 022717 18 FSMQEFANQCFGNKAD---YGKGRQMPI-----HYGSN--KHNYFTV--SSTIATQLPHAVGAAYALKMDRKDACAVTYF 85 (293)
Q Consensus 18 ~~~~~~~~~~~g~~~~---~~~G~~~~~-----h~~~~--~~~~~~~--~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~ 85 (293)
+++..++..+....++ ...+.+.+. ++... ...++.+ .+.||+++|.|+|+++|. +++|||++
T Consensus 405 ~~~~~~~~~L~~~lp~d~iv~~d~g~~~~~~~~~~~~~~~~~~~~~~~G~~~ig~~l~~AiGaala~-----~~~vv~i~ 479 (604)
T 2x7j_A 405 SFEGNLYRILQHLVPENSSLFVGNSMPIRDVDTFFEKQDRPFRIYSNRGANGIDGVVSSAMGVCEGT-----KAPVTLVI 479 (604)
T ss_dssp TSHHHHHHHHHHHSCTTCEEEECTTHHHHHHHHHCCCBSCCCEEECCTTTCCSSSHHHHHHHHHHHH-----TSCEEEEE
T ss_pred CCHHHHHHHHHHhCCCCCEEEEECCHHHHHHHHhcccCCCCceEEeCCCcCCcCcHHHHHHHHHhcC-----CCcEEEEE
Confidence 5677777776654432 112333211 12111 3455544 468999999999999993 67899999
Q ss_pred CcccccchHHHHHHHHHhhcCCCEEE-EEEeCCccccccccC------------ccCcccHHHHHhhcCceEEEEeCCCH
Q 022717 86 GDGGTSEGDFHAALNFSAVTEAPVIF-ICRNNGWAISTPISD------------QFRSDGAVVKGRAYGVRSIRVDGNDA 152 (293)
Q Consensus 86 GDGa~~~G~~~Eal~~A~~~~lpvi~-vi~NN~~~~~~~~~~------------~~~~~d~~~~a~a~G~~~~~VdG~D~ 152 (293)
|||+|+++ + ++|++|+++++|+++ |++||+|++...... .....|+.++|++||+++++|+ ++
T Consensus 480 GDGsf~~~-~-~eL~ta~~~~lp~~ivv~NN~~~~i~~~~~~~q~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~ 555 (604)
T 2x7j_A 480 GDLSFYHD-L-NGLLAAKKLGIPLTVILVNNDGGGIFSFLPQASEKTHFEDLFGTPTGLDFKHAAALYGGTYSCPA--SW 555 (604)
T ss_dssp EHHHHHHT-G-GGGHHHHHHCCCEEEEEEECSSCGGGGGSGGGSCHHHHHHHTTCCCCCCTHHHHHHTTCEEECCS--SH
T ss_pred ccHHHHhH-H-HHHHHhhhcCCCeEEEEEeCCCCcccccCCCCccchhhHhhccCCCCCCHHHHHHHcCCeEEecC--CH
Confidence 99999875 3 459999999999555 556668887542210 1124689999999999999998 68
Q ss_pred HHHHHHHHHHHHHhhccCCcEEEEEEeec
Q 022717 153 LAIYSAVHAAREMAIGEGRPILIEALTYR 181 (293)
Q Consensus 153 ~~v~~a~~~a~~~~r~~~gP~lIe~~t~R 181 (293)
+++.+++++|+ +.++|+|||+.|+|
T Consensus 556 ~el~~al~~a~----~~~gp~liev~~~~ 580 (604)
T 2x7j_A 556 DEFKTAYAPQA----DKPGLHLIEIKTDR 580 (604)
T ss_dssp HHHHHHCCCCC----SSCCEEEEEEECCH
T ss_pred HHHHHHHHHHH----hCCCCEEEEEECCc
Confidence 88877777665 36899999999864
No 44
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=99.60 E-value=7.1e-16 Score=152.54 Aligned_cols=151 Identities=15% Similarity=0.114 Sum_probs=101.5
Q ss_pred CCCHHHHHHHhhcCCCCC---CCCCCCcc-c---cC--CCCCCcccc---cccccCccHHHHHHHHHhhhcCCCceEEEE
Q 022717 17 GFSMQEFANQCFGNKADY---GKGRQMPI-H---YG--SNKHNYFTV---SSTIATQLPHAVGAAYALKMDRKDACAVTY 84 (293)
Q Consensus 17 G~~~~~~~~~~~g~~~~~---~~G~~~~~-h---~~--~~~~~~~~~---~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~ 84 (293)
.+++..++..+....++. ..|.++.. + +. .....++.. .|++|+ +|.|+|+++| ++++|||+
T Consensus 366 ~~~~~~~~~~l~~~l~~~~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~G~-l~~A~Gaa~a-----~~~~vv~i 439 (556)
T 3hww_A 366 AFGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDGL-LSTAAGVQRA-----SGKPTLAI 439 (556)
T ss_dssp SSSHHHHHHTGGGTCCTTCEEEECSSHHHHHHHHHCCCCTTCCEEECCSSCCSSSH-HHHHHHHHHH-----HCCCEEEE
T ss_pred CcCHHHHHHHHHHhCCCCCeEEEeCCcHHHHHHHhccCCCCceEEecCcccccccH-HHHHHHHHhc-----CCCcEEEE
Confidence 477888888876554431 12333211 1 11 112334433 456666 9999999998 26789999
Q ss_pred eCcccccchHHHHHHHHHhhcCCCEEEEEEeCC-ccccccc-------c---CccCcccHHHHHhhcCceEEEEeCCCHH
Q 022717 85 FGDGGTSEGDFHAALNFSAVTEAPVIFICRNNG-WAISTPI-------S---DQFRSDGAVVKGRAYGVRSIRVDGNDAL 153 (293)
Q Consensus 85 ~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~-~~~~~~~-------~---~~~~~~d~~~~a~a~G~~~~~VdG~D~~ 153 (293)
+|||+|++. .++|++|+++++|+++||.||+ |++.... . ......|+.++|++||+++++|+ +.+
T Consensus 440 ~GDGsf~~~--~~eL~ta~~~~lpv~ivv~NN~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~ 515 (556)
T 3hww_A 440 VGDLSALYD--LNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKYHRPQ--NWQ 515 (556)
T ss_dssp EEHHHHHHT--GGGHHHHTTCSSCEEEEEEESCC-----------------CCCCCCCCSHHHHHHTTCEEECCS--SHH
T ss_pred EccHHhhhc--chhhHhhcccCCCcEEEEEECCCCCcccCCCCcchhHHHhccCCCCCCHHHHHHHcCCcEEecC--CHH
Confidence 999999754 3459999999999777666665 5654321 1 11235789999999999999997 677
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEeec
Q 022717 154 AIYSAVHAAREMAIGEGRPILIEALTYR 181 (293)
Q Consensus 154 ~v~~a~~~a~~~~r~~~gP~lIe~~t~R 181 (293)
++.+++++++ +.++|+|||+.|++
T Consensus 516 ~l~~al~~a~----~~~gp~liev~~~~ 539 (556)
T 3hww_A 516 ELETAFADAW----RTPTTTVIEMVVND 539 (556)
T ss_dssp HHHHHHHHHT----TSSSEEEEEEECCS
T ss_pred HHHHHHHHHH----hCCCCEEEEEECCc
Confidence 8877777665 46899999999864
No 45
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=99.54 E-value=2.1e-15 Score=149.78 Aligned_cols=119 Identities=15% Similarity=0.062 Sum_probs=81.1
Q ss_pred Cccccccc--ccCccHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeC-Cccccccc--
Q 022717 50 NYFTVSST--IATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPI-- 124 (293)
Q Consensus 50 ~~~~~~g~--lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN-~~~~~~~~-- 124 (293)
.++...|. +|+++|.|+|+|+ ++++|||++|||+|++. .++|++|+++++|+++||.|| +|++....
T Consensus 428 ~~~~~~G~~G~~g~l~~AiGaa~------~~~~vv~i~GDGsf~~~--~~eL~ta~~~~l~~~ivv~NN~~~g~~~~~~~ 499 (578)
T 3lq1_A 428 KMLANRGANGIDGVVSSALGASV------VFQPMFLLIGDLSFYHD--MNGLLMAKKYKMNLTIVIVNNDGGGIFSFLPQ 499 (578)
T ss_dssp EEECCCSSCCSSSHHHHHHHHTT------TSSSEEEEEEHHHHHHT--GGGGHHHHHTTCCEEEEEECCC----------
T ss_pred eEEeCCCccccccHHHHHHHHhc------CCCCEEEEEchHHHHhh--HHHHHhhccCCCCeEEEEEECCcCcccccccc
Confidence 34444443 3446999999863 47889999999999753 456999999999976665555 68775421
Q ss_pred -c--C----c---cCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecC
Q 022717 125 -S--D----Q---FRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 182 (293)
Q Consensus 125 -~--~----~---~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~ 182 (293)
+ . . ....||.++|++||+++++|+ +++++.++++++++ .++|+|||+.|.+.
T Consensus 500 ~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~liev~~~~~ 561 (578)
T 3lq1_A 500 ANEPKYFESLFGTSTELDFRFAAAFYDADYHEAK--SVDELEEAIDKASY----HKGLDIIEVKTNRH 561 (578)
T ss_dssp ---------------CCCTHHHHHHTTCEEEECC--SHHHHHHHHHHHTT----SSSEEEEEEC----
T ss_pred ccccchhhhhccCCCCCCHHHHHHHcCCceEecC--CHHHHHHHHHHHHh----CCCCEEEEEECCcc
Confidence 1 0 0 124589999999999999997 78888888877764 68999999998763
No 46
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=99.08 E-value=3.6e-10 Score=120.54 Aligned_cols=99 Identities=13% Similarity=0.111 Sum_probs=75.4
Q ss_pred CceEEEEeCcc-cccchHHHHHHHHHhhcCCCEEEEEEeCC-ccccccccCc----------------cCcccHHHHHhh
Q 022717 78 DACAVTYFGDG-GTSEGDFHAALNFSAVTEAPVIFICRNNG-WAISTPISDQ----------------FRSDGAVVKGRA 139 (293)
Q Consensus 78 ~~~vv~~~GDG-a~~~G~~~Eal~~A~~~~lpvi~vi~NN~-~~~~~~~~~~----------------~~~~d~~~~a~a 139 (293)
++.||++.||| ++.+|. .+|.+|..+++||++||.||+ |+++..+... ....|+.++|++
T Consensus 953 ~~~Vv~i~GDG~~~~mg~--~eL~ta~~~~~~v~iiVlnN~~yg~tg~Q~s~~t~~~~~t~~~~~g~~~~~~D~~~iA~a 1030 (1231)
T 2c42_A 953 KKSVWIFGGDGWAYDIGY--GGLDHVLASGEDVNVFVMDTEVYSNTGGQSSKATPTGAVAKFAAAGKRTGKKDLARMVMT 1030 (1231)
T ss_dssp CCEEEEEEEHHHHHTTTH--HHHHHHHHTTCSCEEEEEECSSBTTTTCBCCTTSCTTCCBBTBTTCCSSCCCCHHHHHHT
T ss_pred CCcEEEEeCcHHHHHcch--HHHHHHHHhCCCeEEEEEECHHHHhHHhhhccCCCCCceeeecccCCCCCchhHHHHHHH
Confidence 47899999999 788773 359999999999666665554 6665321110 123589999999
Q ss_pred cCceEEEE-eC-CCHHHHHHHHHHHHHHhhccCCcEEEEEEeecC
Q 022717 140 YGVRSIRV-DG-NDALAIYSAVHAAREMAIGEGRPILIEALTYRV 182 (293)
Q Consensus 140 ~G~~~~~V-dG-~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~ 182 (293)
||++++.+ .- .++.++.+++++|++ .+||+||++.+.-.
T Consensus 1031 ~G~~~va~~~v~~~~~~l~~al~eAl~----~~GP~lI~v~~~c~ 1071 (1231)
T 2c42_A 1031 YGYVYVATVSMGYSKQQFLKVLKEAES----FPGPSLVIAYATCI 1071 (1231)
T ss_dssp TSSSEEEEECTTTCHHHHHHHHHHHHH----SSSCEEEEEECCCG
T ss_pred CCCCEEEEEeccCCHHHHHHHHHHHHh----cCCCEEEEEeecCc
Confidence 99999964 33 489999999999986 58999999988544
No 47
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=95.48 E-value=0.077 Score=51.99 Aligned_cols=108 Identities=18% Similarity=0.123 Sum_probs=76.0
Q ss_pred HHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCcccccc-ccCccCcccHHHHHhhcC
Q 022717 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP-ISDQFRSDGAVVKGRAYG 141 (293)
Q Consensus 63 p~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~-~~~~~~~~d~~~~a~a~G 141 (293)
-+|.|.|.+. +.-.++++..|=|+++ ..-++..|...++|+|+|.-+-....... ...| ..|...+++.+-
T Consensus 62 ~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~~v~~A~~~~~Pll~itg~~~~~~~~~~~~~Q--~~d~~~~~~~~~ 133 (573)
T 2iht_A 62 VAADVLARIT---GRPQACWATLGPGMTN---LSTGIATSVLDRSPVIALAAQSESHDIFPNDTHQ--CLDSVAIVAPMS 133 (573)
T ss_dssp HHHHHHHHHH---CSCEEEEECTTHHHHH---HHHHHHHHHHHTCCEEEEEEESCGGGCCTTTSTT--CCCHHHHHGGGS
T ss_pred HHHHHHHHHH---CCCEEEEEccCchHHH---HHHHHHHHHhhCCCEEEEcccCcccccCCcCccc--cCCHHHHHHhHh
Confidence 3566666554 3445666667777775 34467788888999999988766543322 1112 247778888887
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEee
Q 022717 142 VRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALTY 180 (293)
Q Consensus 142 ~~~~~VdG~D~~~v~~a~~~a~~~~r~~~-gP~lIe~~t~ 180 (293)
-...++. +++++...+++|+..+..++ ||+.|++-..
T Consensus 134 k~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 171 (573)
T 2iht_A 134 KYAVELQ--RPHEITDLVDSAVNAAMTEPVGPSFISLPVD 171 (573)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHTBSSCCCEEEEEEHH
T ss_pred hEEEEcC--CHHHHHHHHHHHHHHHhcCCCceEEEEecch
Confidence 7777775 78888999999998888775 9999999764
No 48
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=95.48 E-value=0.069 Score=52.56 Aligned_cols=109 Identities=18% Similarity=0.154 Sum_probs=76.4
Q ss_pred cHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcC
Q 022717 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 141 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G 141 (293)
.-+|.|.|.+. +.-.++++..|=|+++ ..-++..|...++|+|+|.-+-......... .-..|...+++.+-
T Consensus 63 a~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~gv~~A~~~~vPll~itg~~~~~~~g~~~--~Q~~d~~~~~~~~~ 134 (590)
T 1ybh_A 63 VFAAEGYARSS---GKPGICIATSGPGATN---LVSGLADALLDSVPLVAITGQVPRRMIGTDA--FQETPIVEVTRSIT 134 (590)
T ss_dssp HHHHHHHHHHH---SSCEEEEECTTHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGTTTTC--TTCCCHHHHHGGGS
T ss_pred HHHHHHHHHHH---CCCEEEEeccCchHHH---HHHHHHHHHhhCCCEEEEeCcCCccccCCCc--ccccCHHHHHHHHh
Confidence 34566776654 3455667777888776 2345778888999999998876543322111 11246778888887
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhcc-CCcEEEEEEee
Q 022717 142 VRSIRVDGNDALAIYSAVHAAREMAIGE-GRPILIEALTY 180 (293)
Q Consensus 142 ~~~~~VdG~D~~~v~~a~~~a~~~~r~~-~gP~lIe~~t~ 180 (293)
-...++. +++++..++++|+..++.+ .||+.|++-..
T Consensus 135 k~~~~v~--~~~~i~~~l~~A~~~a~~~~~GPV~l~iP~d 172 (590)
T 1ybh_A 135 KHNYLVM--DVEDIPRIIEEAFFLATSGRPGPVLVDVPKD 172 (590)
T ss_dssp SEEEECC--CGGGHHHHHHHHHHHHHSSSCCEEEEEEEHH
T ss_pred CeEEecC--CHHHHHHHHHHHHHHHhhCCCceEEEEeCcc
Confidence 6677775 7888999999999888876 48999998653
No 49
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=95.39 E-value=0.088 Score=51.43 Aligned_cols=109 Identities=20% Similarity=0.102 Sum_probs=75.8
Q ss_pred cHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCc-ccHHHHHhhc
Q 022717 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRS-DGAVVKGRAY 140 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~-~d~~~~a~a~ 140 (293)
.-+|.|.|.+. ++-.++++..|=|+++. .-++..|...++|+|+|.-+-..........| . .|...+++.+
T Consensus 54 a~~A~Gyar~t---g~p~v~~~TsGpG~~N~---~~~l~~A~~~~~Pll~itg~~~~~~~~~~~~Q--~~~d~~~~~~~~ 125 (563)
T 2uz1_A 54 GHAAEGYARAG---AKLGVALVTAGGGFTNA---VTPIANAWLDRTPVLFLTGSGALRDDETNTLQ--AGIDQVAMAAPI 125 (563)
T ss_dssp HHHHHHHHHHH---TSCEEEEECTTHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGTTSCCTT--CCCCHHHHHGGG
T ss_pred HHHHHHHHHHh---CCCEEEEEccCccHHHH---HHHHHHHHhcCCCEEEEeCCCCcccCCchhhh--hhccHHHHhhhh
Confidence 34566766554 34456666667777762 34577788889999999887665432211111 2 4677888888
Q ss_pred CceEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEee
Q 022717 141 GVRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALTY 180 (293)
Q Consensus 141 G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~-gP~lIe~~t~ 180 (293)
--...++. +++++...+.+|+..+..++ ||+.|++-..
T Consensus 126 tk~~~~v~--~~~~~~~~l~~A~~~a~~~~~GPV~l~iP~d 164 (563)
T 2uz1_A 126 TKWAHRVM--ATEHIPRLVMQAIRAALSAPRGPVLLDLPWD 164 (563)
T ss_dssp CSEEEECC--CGGGHHHHHHHHHHHHHSSSCCCEEEEEEHH
T ss_pred hceEEEcC--CHHHHHHHHHHHHHHhcCCCCceEEEEeCHH
Confidence 77777775 78888899999998888765 9999998764
No 50
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=95.25 E-value=0.076 Score=52.01 Aligned_cols=108 Identities=16% Similarity=0.032 Sum_probs=73.8
Q ss_pred HHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCc
Q 022717 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 142 (293)
Q Consensus 63 p~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~ 142 (293)
-+|.|.|.+. +.-.++++..|=|+++ ..-++..|...++|+|+|.-+-..........| ..|...+++.+--
T Consensus 62 ~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~~l~~A~~~~vPll~itg~~~~~~~~~~~~Q--~~d~~~~~~~~tk 133 (566)
T 1ozh_A 62 FMAAAVGRIT---GKAGVALVTSGPGCSN---LITGMATANSEGDPVVALGGAVKRADKAKQVHQ--SMDTVAMFSPVTK 133 (566)
T ss_dssp HHHHHHHHHH---SSCEEEEECSTHHHHT---THHHHHHHHHHTCCEEEEEEECCTTTC--------CCCHHHHHGGGCS
T ss_pred HHHHHHHHHH---CCCEEEEEccChHHHH---HHHHHHHHHhcCCCEEEEeCCCccccCCCCccc--ccCHHHHHHHHhh
Confidence 3566666553 3445566666888886 234577788889999999887654332111111 2467778888877
Q ss_pred eEEEEeCCCHHHHHHHHHHHHHHhhcc-CCcEEEEEEee
Q 022717 143 RSIRVDGNDALAIYSAVHAAREMAIGE-GRPILIEALTY 180 (293)
Q Consensus 143 ~~~~VdG~D~~~v~~a~~~a~~~~r~~-~gP~lIe~~t~ 180 (293)
...++. +++++...+++|+..+..+ .||+.|++-..
T Consensus 134 ~~~~v~--~~~~~~~~i~~A~~~A~~~r~GPV~l~iP~d 170 (566)
T 1ozh_A 134 YAIEVT--APDALAEVVSNAFRAAEQGRPGSAFVSLPQD 170 (566)
T ss_dssp EEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEEHH
T ss_pred eEEEcC--CHHHHHHHHHHHHHHHhcCCCCeEEEEeChh
Confidence 777775 7888888999999888877 49999998764
No 51
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=95.00 E-value=0.14 Score=50.28 Aligned_cols=107 Identities=18% Similarity=0.113 Sum_probs=73.7
Q ss_pred HHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccc-cCccCcccHHHHHhhcC
Q 022717 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI-SDQFRSDGAVVKGRAYG 141 (293)
Q Consensus 63 p~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~-~~~~~~~d~~~~a~a~G 141 (293)
-+|.|.|.+. +.-.++++..|=|+++. .-++..|...++|+|+|.-+-........ ..| ..|... ++.+-
T Consensus 57 ~~A~GyAr~t---g~p~v~~~TsGpG~~N~---~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~Q--~~d~~~-~~~~t 127 (589)
T 2pgn_A 57 WMVNGYNYVK---DRSAAVGAWHCVGNLLL---HAAMQEARTGRIPAVHIGLNSDGRLAGRSEAAQ--QVPWQS-FTPIA 127 (589)
T ss_dssp HHHHHHHHHH---TSCCEEEEEEGGGGGGC---HHHHHHHHHTTCCEEEEEEESCGGGTTCTTCSS--CCCGGG-GTTTS
T ss_pred HHHHHHHHHH---CCCEEEEEecCchHHHH---HHHHHHHHhcCCCEEEEecCCcccccCCCCccc--ccChhh-ccccE
Confidence 3566766554 44567888889998862 34577888999999999887655432211 111 124445 55555
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEee
Q 022717 142 VRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALTY 180 (293)
Q Consensus 142 ~~~~~VdG~D~~~v~~a~~~a~~~~r~~~-gP~lIe~~t~ 180 (293)
-...++. +++++...+.+|+..+..++ ||+.|++-..
T Consensus 128 k~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 165 (589)
T 2pgn_A 128 RSTQRVE--RLDKVGEAIHEAFRVAEGHPAGPAYVDIPFD 165 (589)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHTSSSCCEEEEEEETH
T ss_pred EEEeecC--CHHHHHHHHHHHHHHHhcCCCccEEEEeCHh
Confidence 5566664 78888899999998888776 9999988764
No 52
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=94.93 E-value=0.13 Score=50.16 Aligned_cols=110 Identities=19% Similarity=0.109 Sum_probs=71.3
Q ss_pred cHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccc---cCcc---CcccHHH
Q 022717 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI---SDQF---RSDGAVV 135 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~---~~~~---~~~d~~~ 135 (293)
.-+|.|.|.+. + -.++++..|=|+++ ..-++..|...++|+|+|+-+-........ .... ...|...
T Consensus 54 a~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~ 126 (566)
T 2vbi_A 54 GFSAEGYARSN---G-AAAAVVTFSVGAIS---AMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLE 126 (566)
T ss_dssp HHHHHHHHHHH---S-CEEEEECTTTTHHH---HHHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCTHHHH
T ss_pred HHHHHHHHhhc---C-CeEEEEeCCCCHHH---HHHHHHHHHhhCCCEEEEECCCChHHhccCceeeeeccCcchHHHHH
Confidence 34566766553 3 44555566777775 334577788899999999887665332110 0000 1125677
Q ss_pred HHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEee
Q 022717 136 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTY 180 (293)
Q Consensus 136 ~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~ 180 (293)
+.+.+--...++. +++++...+.+|+..+..+.||+.|++-..
T Consensus 127 ~~~~~tk~~~~v~--~~~~~~~~l~~A~~~a~~~~GPV~l~iP~d 169 (566)
T 2vbi_A 127 MARQVTCAAESIT--DAHSAPAKIDHVIRTALRERKPAYLDIACN 169 (566)
T ss_dssp HHHTTCSEEEEEC--SSSSHHHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred HHhhhEeEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEechh
Confidence 8888877777775 555666777777777777789999999764
No 53
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=94.90 E-value=0.1 Score=50.89 Aligned_cols=107 Identities=14% Similarity=-0.066 Sum_probs=72.5
Q ss_pred HHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCc
Q 022717 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 142 (293)
Q Consensus 63 p~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~ 142 (293)
-+|.|.|.+. +.-.++++..|=|+++. .-++..|...+.|+|+|.-+-......... .-..|...+++.+--
T Consensus 55 ~~A~GyAr~t---g~~~v~~~TsGpG~~N~---~~gi~~A~~~~vPvl~itg~~~~~~~~~~~--~Q~~d~~~~~~~~tk 126 (549)
T 3eya_A 55 FAAGAEAQLS---GELAVCAGSCGPGNLHL---INGLFDCHRNHVPVLAIAAHIPSSEIGSGY--FQETHPQELFRECSH 126 (549)
T ss_dssp HHHHHHHHHH---SSCEEEEECTTHHHHTT---HHHHHHHHHTTCCEEEEEEESCGGGTTSCC--TTCCCHHHHTSTTCS
T ss_pred HHHHHHHHHh---CCCEEEEeCCCCcHhhh---HHHHHHHHhhCCCEEEEeCCCchhhcCCCC--CCccCHHHHHhhhhh
Confidence 3466666554 34456677778888862 345778888999999998765432211111 112366677777766
Q ss_pred eEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEe
Q 022717 143 RSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 179 (293)
Q Consensus 143 ~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t 179 (293)
...++. +++++...+.+|+..+....||+.|++-.
T Consensus 127 ~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~ 161 (549)
T 3eya_A 127 YCELVS--SPEQIPQVLAIAMRKAVLNRGVSVVVLPG 161 (549)
T ss_dssp EEEECC--SGGGHHHHHHHHHHHHHHTTSEEEEEEEH
T ss_pred eEEEeC--CHHHHHHHHHHHHHHHhhCCCCEEEEeCh
Confidence 666665 67778888888888887788999999865
No 54
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=94.87 E-value=0.16 Score=49.56 Aligned_cols=110 Identities=16% Similarity=0.089 Sum_probs=73.8
Q ss_pred cHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccc---cCcc---CcccHHH
Q 022717 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI---SDQF---RSDGAVV 135 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~---~~~~---~~~d~~~ 135 (293)
.-+|.|.|.+. + -.++++..|=|+++ ..-++..|...++|+|+|.-+-........ .... ...|...
T Consensus 54 a~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~ 126 (568)
T 2wvg_A 54 GFSAEGYARAK---G-AAAAVVTYSVGALS---AFDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLE 126 (568)
T ss_dssp HHHHHHHHHHH---S-CEEEEECTTTTHHH---HHHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCCHHHH
T ss_pred HHHHHHHHHhh---C-CeEEEEeCCCCHHH---HHHHHHHHhhhCCCEEEEeCCCChhHhccCcceeeeccccchHHHHH
Confidence 34566766554 4 45666667777775 344577788899999999887665432110 0000 1125677
Q ss_pred HHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEee
Q 022717 136 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTY 180 (293)
Q Consensus 136 ~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~ 180 (293)
+++.+--...++. +++++...+.+|+..+..+.||+.|++-..
T Consensus 127 ~~~~~tk~~~~v~--~~~~~~~~l~~A~~~A~~~~GPV~l~iP~d 169 (568)
T 2wvg_A 127 MAKNITAAAEAIY--TPEEAPAKIDHVIKTALREKKPVYLEIACN 169 (568)
T ss_dssp HHTTSCSCEEEEC--SGGGHHHHHHHHHHHHHHHTCCEEEEEEGG
T ss_pred HHHhhEeEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEechh
Confidence 7777777777786 677777888888887777889999999764
No 55
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=94.82 E-value=0.12 Score=51.95 Aligned_cols=107 Identities=17% Similarity=0.147 Sum_probs=74.3
Q ss_pred HHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCc
Q 022717 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 142 (293)
Q Consensus 63 p~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~ 142 (293)
-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|...++|+|+|.-+-........ .+-..|...+++.+--
T Consensus 134 ~aAdGyAr~t---Gkpgvv~~TsGpG~~N---~~~gia~A~~d~vPllvItG~~~~~~~g~~--a~Q~~Dq~~i~~~~tk 205 (677)
T 1t9b_A 134 HMAEGYARAS---GKPGVVLVTSGPGATN---VVTPMADAFADGIPMVVFTGQVPTSAIGTD--AFQEADVVGISRSCTK 205 (677)
T ss_dssp HHHHHHHHHH---SSCEEEEECSTHHHHT---THHHHHHHHHHTCCEEEEEEECCTTTTTSC--CTTCCCHHHHTGGGSS
T ss_pred HHHHHHHHHH---CCCEEEEECCChHHHH---HHHHHHHHHHcCCCEEEEeCCCChhhcCCC--CccccCHHHHhhhhee
Confidence 3566666554 3455677777888876 234577788889999999877554322111 1112366677777766
Q ss_pred eEEEEeCCCHHHHHHHHHHHHHHhhcc-CCcEEEEEEe
Q 022717 143 RSIRVDGNDALAIYSAVHAAREMAIGE-GRPILIEALT 179 (293)
Q Consensus 143 ~~~~VdG~D~~~v~~a~~~a~~~~r~~-~gP~lIe~~t 179 (293)
...+|. +++++...+.+|+..+..+ .||+.|++-.
T Consensus 206 ~~~~v~--~~~~i~~~i~~A~~~A~~grpGPV~l~lP~ 241 (677)
T 1t9b_A 206 WNVMVK--SVEELPLRINEAFEIATSGRPGPVLVDLPK 241 (677)
T ss_dssp EEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred EEEEcC--CHHHHHHHHHHHHHHHhhCCCceEEEEcCH
Confidence 667775 7889999999999888876 6899999973
No 56
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=94.57 E-value=0.13 Score=50.26 Aligned_cols=110 Identities=15% Similarity=0.170 Sum_probs=73.4
Q ss_pred HHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCc
Q 022717 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 142 (293)
Q Consensus 63 p~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~ 142 (293)
-+|.|.|.+. +.-.++++..|=|+++ ..-++..|...++|+|+|.-+-...............|...+++.+--
T Consensus 59 ~~A~Gyar~t---g~pgv~~~TsGpG~~N---~~~gi~~A~~~~vPll~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~tk 132 (564)
T 2q28_A 59 YAAAASGFLT---QKPGICLTVSAPGFLN---GLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAK 132 (564)
T ss_dssp HHHHHHHHHH---SSCEEEEECSHHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTSCCTTCCCHHHHHGGGSS
T ss_pred HHHHHHHHHh---CCCEEEEEccCchHHH---HHHHHHHHHhcCCCEEEEeCCCCccccCCCCCccccccHHHHHHHhhh
Confidence 3466766553 3344566666777765 344577888899999999887654322100011112366777888877
Q ss_pred eEEEEeCCCHHHHHHHHHHHHHHhhcc-CCcEEEEEEee
Q 022717 143 RSIRVDGNDALAIYSAVHAAREMAIGE-GRPILIEALTY 180 (293)
Q Consensus 143 ~~~~VdG~D~~~v~~a~~~a~~~~r~~-~gP~lIe~~t~ 180 (293)
...+|. +++++...+.+|+..+..+ .||+.|++-..
T Consensus 133 ~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 169 (564)
T 2q28_A 133 AAFRVN--QPQDLGIALARAIRVSVSGRPGGVYLDLPAN 169 (564)
T ss_dssp EEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEEHH
T ss_pred eeeecC--CHHHHHHHHHHHHHHHhcCCCceEEEEcCHH
Confidence 777775 6777888889998888774 69999988653
No 57
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=94.39 E-value=0.13 Score=50.27 Aligned_cols=110 Identities=19% Similarity=0.134 Sum_probs=68.2
Q ss_pred HHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCcccccccc---CccCccc-HHHHHh
Q 022717 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPIS---DQFRSDG-AVVKGR 138 (293)
Q Consensus 63 p~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~---~~~~~~d-~~~~a~ 138 (293)
-+|.|.|.+. ++-.++++..|=|+++ ..-++..|...++|+|+|.-+-......... .+....| ...+++
T Consensus 73 ~~A~GyAr~t---gkp~v~~~TsGpG~~N---~~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~~~~~q~~d~q~~~~~ 146 (565)
T 2nxw_A 73 FAADAAARYS---STLGVAAVTYGAGAFN---MVNAVAGAYAEKSPVVVISGAPGTTEGNAGLLLHHQGRTLDTQFQVFK 146 (565)
T ss_dssp HHHHHHHHHH---TSCEEEEECTTHHHHT---THHHHHHHHHTTCCEEEEEEECCTTCC--CCCC-------CHHHHHHT
T ss_pred HHHHHHHHHh---CCCeEEEECCCCCHHH---HHHHHHHHHhhCCCEEEEeCCCChhhhccCcceeeeccchhhHHHHHH
Confidence 3566776654 3445566666888776 2345777888999999998875432211100 0001123 556777
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEee
Q 022717 139 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTY 180 (293)
Q Consensus 139 a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~ 180 (293)
.+--...++. +++++...+.+|+..+....||+.|++-..
T Consensus 147 ~~~k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~D 186 (565)
T 2nxw_A 147 EITVAQARLD--DPAKAPAEIARVLGAARAQSRPVYLEIPRN 186 (565)
T ss_dssp TSCSCEEECC--CTTTHHHHHHHHHHHHHHHTCCEEEEEEGG
T ss_pred hhheEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEECChh
Confidence 7766666765 566666777777776666789999999854
No 58
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=94.37 E-value=0.11 Score=51.04 Aligned_cols=107 Identities=20% Similarity=0.014 Sum_probs=71.7
Q ss_pred cHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcC
Q 022717 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 141 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G 141 (293)
.-+|.|.|.+. +.-.++++..|=|+++ ..-++..|...++|+|+|.-+-..........| ..|...+++.+-
T Consensus 56 a~~A~GyAr~t---gk~~v~~~tsGpG~~N---~~~gl~~A~~~~vPll~Itg~~p~~~~g~~~~Q--~~d~~~~~~~~t 127 (590)
T 1v5e_A 56 AMAAVMQSKFG---GNLGVTVGSGGPGASH---LINGLYDAAMDNIPVVAILGSRPQRELNMDAFQ--ELNQNPMYDHIA 127 (590)
T ss_dssp HHHHHHHHHTT---CCCCEEEECTTHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGTTTTCTT--CCCCHHHHHTTC
T ss_pred HHHHHHHHHHH---CCCEEEEeCcChHHHH---HHHHHHHHHhcCCCEEEEcCCCCcccCCCCccc--ccCHHHHHHhhc
Confidence 34466665543 3445666666877776 234577788889999999887765432211111 235667777776
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEe
Q 022717 142 VRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALT 179 (293)
Q Consensus 142 ~~~~~VdG~D~~~v~~a~~~a~~~~r~~~-gP~lIe~~t 179 (293)
-....+. +++++...+++|+..+..++ ||+.| +-.
T Consensus 128 k~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l-iP~ 163 (590)
T 1v5e_A 128 VYNRRVA--YAEQLPKLVDEAARMAIAKRGVAVLE-VPG 163 (590)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHHHTTSEEEEE-EET
T ss_pred cEEEEeC--CHHHHHHHHHHHHHHHhcCCCceEEE-Ecc
Confidence 5666665 78888889999998888776 89999 654
No 59
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=94.31 E-value=0.14 Score=50.15 Aligned_cols=110 Identities=15% Similarity=0.101 Sum_probs=72.8
Q ss_pred HHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCc
Q 022717 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 142 (293)
Q Consensus 63 p~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~ 142 (293)
-+|.|.|.+. +.-.++++..|=|+++ ..-++..|...++|+|+|.-+-...............|...+++.+--
T Consensus 61 ~~A~GyAr~t---g~pgv~~~TsGpG~~N---~~~~i~~A~~~~vPll~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~tk 134 (568)
T 2c31_A 61 YAASIAGYIE---GKPGVCLTVSAPGFLN---GVTSLAHATTNCFPMILLSGSSEREIVDLQQGDYEEMDQMNVARPHCK 134 (568)
T ss_dssp HHHHHHHHHH---SSCEEEEECSHHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTTCCCHHHHSGGGSS
T ss_pred HHHHHHHHHh---CCCEEEEEcCCccHHH---HHHHHHHHHhcCCCEEEEccCCCccccCCCCCcccccCHHHHHHhhhh
Confidence 3466666553 3345666666777765 345677888899999999887654332200011112366677777766
Q ss_pred eEEEEeCCCHHHHHHHHHHHHHHhhc-cCCcEEEEEEee
Q 022717 143 RSIRVDGNDALAIYSAVHAAREMAIG-EGRPILIEALTY 180 (293)
Q Consensus 143 ~~~~VdG~D~~~v~~a~~~a~~~~r~-~~gP~lIe~~t~ 180 (293)
...++. +++++...+.+|+..+.. ..||+.|++-..
T Consensus 135 ~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 171 (568)
T 2c31_A 135 ASFRIN--SIKDIPIGIARAVRTAVSGRPGGVYVDLPAK 171 (568)
T ss_dssp EEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEETH
T ss_pred eeeecC--CHHHHHHHHHHHHHHhcCCCCceEEEeCCHH
Confidence 677775 777888889999988877 468999988653
No 60
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=94.11 E-value=0.12 Score=50.99 Aligned_cols=107 Identities=14% Similarity=-0.006 Sum_probs=68.1
Q ss_pred HHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCc
Q 022717 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 142 (293)
Q Consensus 63 p~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~ 142 (293)
-+|.|.|.+. +.-.++++..|=|+++- .-++..|...+.|+|+|.-+-..........| ..|...+++.+--
T Consensus 64 ~aA~GyAr~t---g~~gv~~~TsGpG~~N~---~~gia~A~~~~vPvl~itG~~~~~~~~~~~~Q--~~d~~~~~~~~tk 135 (603)
T 4feg_A 64 MAAAADAKLT---GKIGVCFGSAGPGGTHL---MNGLYDAREDHVPVLALIGQFGTTGMNMDTFQ--EMNENPIYADVAD 135 (603)
T ss_dssp HHHHHHHHHH---SSCEEEEECTTHHHHTT---HHHHHHHHHTTCCEEEEEEECCTTTTTSCCTT--CCCCGGGGTTTCS
T ss_pred HHHHHHHHHh---CCceEEEecCCchHHHH---HHHHHHHHHcCCCEEEEecCCcccccCCCccc--cccHHHHhhhhce
Confidence 3466666554 34456667778888862 34577888899999999866443221111111 1245556666666
Q ss_pred eEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEe
Q 022717 143 RSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 179 (293)
Q Consensus 143 ~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t 179 (293)
...+|. +++++...+.+|+..+....||+.|++-.
T Consensus 136 ~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~ 170 (603)
T 4feg_A 136 YNVTAV--NAATLPHVIDEAIRRAYAHQGVAVVQIPV 170 (603)
T ss_dssp EEEECC--CSTTHHHHHHHHHHHHHHHTSEEEEEEET
T ss_pred EEEEcC--CHHHHHHHHHHHHHHHhcCCCCEEEEeCh
Confidence 666664 55567777777777666678999999864
No 61
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=94.08 E-value=0.28 Score=48.41 Aligned_cols=108 Identities=16% Similarity=0.105 Sum_probs=72.9
Q ss_pred HHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCc
Q 022717 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 142 (293)
Q Consensus 63 p~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~ 142 (293)
-+|.|.|.+.. ++-.++++..|=|+++- .-++..|..-+.|+|+|.-+-..........| ..|...+++.+--
T Consensus 79 ~~A~GyAr~tg--g~~~v~~~TsGpG~~N~---~~~l~~A~~~~vPlvvItg~~p~~~~~~~~~Q--~~d~~~~~~~~tk 151 (616)
T 2pan_A 79 HMAEGYTRATA--GNIGVCLGTSGPAGTDM---ITALYSASADSIPILCITGQAPRARLHKEDFQ--AVDIEAIAKPVSK 151 (616)
T ss_dssp HHHHHHHHHST--TCCEEEEECSTHHHHTS---HHHHHHHHHTTCCEEEEEEECCGGGTTTTCTT--CCCHHHHHGGGSS
T ss_pred HHHHHHHHhcC--CCceEEEeCCCchHHHH---HHHHHHHHhcCCCEEEEecCCcccccCccccc--ccCHHHHHHHHHH
Confidence 34666665530 23345566778887752 34577788889999999887654432211111 2467778888876
Q ss_pred eEEEEeCCCHHHHHHHHHHHHHHhhcc-CCcEEEEEEe
Q 022717 143 RSIRVDGNDALAIYSAVHAAREMAIGE-GRPILIEALT 179 (293)
Q Consensus 143 ~~~~VdG~D~~~v~~a~~~a~~~~r~~-~gP~lIe~~t 179 (293)
...++. ++.++...+++|+..++.+ .||+.|++-.
T Consensus 152 ~~~~v~--~~~~i~~~l~~A~~~A~~~r~GPV~l~iP~ 187 (616)
T 2pan_A 152 MAVTVR--EAALVPRVLQQAFHLMRSGRPGPVLVDLPF 187 (616)
T ss_dssp EEEECC--SGGGHHHHHHHHHHHHHSSSCCCEEEEEEH
T ss_pred hhcccC--CHHHHHHHHHHHHHHHhcCCCceEEEEcch
Confidence 677775 6778899999999888765 5899999865
No 62
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=93.25 E-value=0.15 Score=47.83 Aligned_cols=111 Identities=14% Similarity=0.200 Sum_probs=60.8
Q ss_pred cHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccc-cccccCccCcccH-HHH-Hh
Q 022717 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI-STPISDQFRSDGA-VVK-GR 138 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~-~~~~~~~~~~~d~-~~~-a~ 138 (293)
+.+|+|++++ + .+.++...|.|-.. ..+.|..++..++|+|+++-+..... ..+..... .|. ..+ +.
T Consensus 77 ~~~a~Gaa~a----G-~r~~~~ts~~G~~~---~~d~l~~aa~~~~P~Vi~~~~~~~~~~g~~~~~~~--sd~~~~~~~~ 146 (395)
T 1yd7_A 77 IAAAIGASWA----G-AKAMTATSGPGFSL---MQENIGYAVMTETPVVIVDVQRSGPSTGQPTLPAQ--GDIMQAIWGT 146 (395)
T ss_dssp HHHHHHHHHT----T-CCEEEEEETTHHHH---HTTTCC----CCCCEEEEEEC--------------------------
T ss_pred HHHHHHHHHh----C-CcEEEEeCchHHHH---HHHHHHHHHhcCCCEEEEEeeCCCCCCCCCcccch--hHHHHHHhcc
Confidence 4455555554 3 34666777887753 24556667778899888777654322 11111111 111 112 22
Q ss_pred --hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCC
Q 022717 139 --AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHT 186 (293)
Q Consensus 139 --a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs 186 (293)
.+|++.+... ++.+++..+..|++.+++.+.|+++....+ . +|+
T Consensus 147 ~g~~g~~vl~p~--~~qea~~l~~~A~~lA~~~~~PVi~~~~~~-l-~h~ 192 (395)
T 1yd7_A 147 HGDHSLIVLSPS--TVQEAFDFTIRAFNLSEKYRTPVILLTDAE-V-GHM 192 (395)
T ss_dssp --CCCCEEECCC--SHHHHHHHHHHHHHHHHHHTSEEEEEECHH-H-HHC
T ss_pred CCCcceEEEeCC--CHHHHHHHHHHHHHHHHHHCCCEEEEcchh-H-hCe
Confidence 3456666554 899999999999988888889999988764 2 454
No 63
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=93.12 E-value=0.19 Score=49.61 Aligned_cols=108 Identities=13% Similarity=0.032 Sum_probs=69.2
Q ss_pred HHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCc
Q 022717 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 142 (293)
Q Consensus 63 p~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~ 142 (293)
-+|.|.|.+. +.-.++++..|=|+++ ..-++..|..-++|+|+|.-+-..........| ..|...+++.+--
T Consensus 83 ~aA~GyAr~t---gkpgv~~~TsGpG~~N---~~~gia~A~~~~vPlv~ItG~~~~~~~g~~~~Q--~~d~~~~~~~~tk 154 (604)
T 2x7j_A 83 FFALGLAKAK---QRPVLLICTSGTAAAN---FYPAVVEAHYSRVPIIVLTADRPHELREVGAPQ--AINQHFLFGNFVK 154 (604)
T ss_dssp HHHHHHHHHH---TSCEEEEECSSHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGSSSCCTT--CCCCTTTTGGGSS
T ss_pred HHHHHHHHhh---CCCEEEEECChhHHHH---HHHHHHHHhhcCCCEEEEeCCCCHHHhCCCCCC--cCcHHHHhhhhee
Confidence 3566766554 3455677777888886 234577888889999999877654322111111 1244455566655
Q ss_pred eEEEEeCCCHHH-------HHHHHHHHHHHhhc-cCCcEEEEEEee
Q 022717 143 RSIRVDGNDALA-------IYSAVHAAREMAIG-EGRPILIEALTY 180 (293)
Q Consensus 143 ~~~~VdG~D~~~-------v~~a~~~a~~~~r~-~~gP~lIe~~t~ 180 (293)
....|. ++++ +...+++|+..+.. ..||+.|++-..
T Consensus 155 ~~~~v~--~~~~~~~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 198 (604)
T 2x7j_A 155 FFTDSA--LPEESPQMLRYIRTLASRAAGEAQKRPMGPVHVNVPLR 198 (604)
T ss_dssp CEEECC--CCCCSHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECC
T ss_pred eeeecC--CCcccchhHHHHHHHHHHHHHHhhCCCCCcEEEEcccC
Confidence 566664 3332 77788888887776 469999999764
No 64
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=92.78 E-value=0.52 Score=46.76 Aligned_cols=91 Identities=16% Similarity=0.140 Sum_probs=58.6
Q ss_pred cCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCcccc--ccccCccCcccHHHHHhhcCceEEEE-eCCC
Q 022717 75 DRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIS--TPISDQFRSDGAVVKGRAYGVRSIRV-DGND 151 (293)
Q Consensus 75 ~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~--~~~~~~~~~~d~~~~a~a~G~~~~~V-dG~D 151 (293)
.|..+++++.++++.. ..++.+.+++..++|+++++...+++.. .++. .+..|++-+. .+|.+.| .-.|
T Consensus 377 ~G~~~~~~~~f~~Fl~---~a~dqi~~~a~~~~~v~~v~~~~g~~~G~dG~tH--~~~ed~a~l~---~iP~l~V~~P~d 448 (616)
T 3mos_A 377 RNRTVPFCSTFAAFFT---RAFDQIRMAAISESNINLCGSHCGVSIGEDGPSQ--MALEDLAMFR---SVPTSTVFYPSD 448 (616)
T ss_dssp GGCCEEEEEEEGGGGG---GGHHHHHHHHHTTCCEEEEEESBSGGGCTTCGGG--CBSSHHHHHH---TSTTEEEECCCS
T ss_pred cCCCCEEEEehHHHHH---HHHHHHHHHHHhCCCeEEEEECCCccccCCCCcc--cCHHHHHHhc---CCCCCEEEecCC
Confidence 3433566778888875 3456677888999999998887776443 3322 2333443333 3444443 4458
Q ss_pred HHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 152 ALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 152 ~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
+.++..+++.|++ .++|++|..
T Consensus 449 ~~e~~~~l~~a~~----~~gp~~ir~ 470 (616)
T 3mos_A 449 GVATEKAVELAAN----TKGICFIRT 470 (616)
T ss_dssp HHHHHHHHHHHHT----CCSEEEEEC
T ss_pred HHHHHHHHHHHHh----cCCCEEEEE
Confidence 9898888888875 478987744
No 65
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=92.70 E-value=0.44 Score=47.25 Aligned_cols=103 Identities=12% Similarity=0.045 Sum_probs=65.0
Q ss_pred cHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccc-cccccCccCcccHHHHHhhc
Q 022717 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI-STPISDQFRSDGAVVKGRAY 140 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~-~~~~~~~~~~~d~~~~a~a~ 140 (293)
+++|+|+|++ .-++++.++++... =.+.+.++.++..++|+++++.+.++.- ..++.. ...|++-+..-=
T Consensus 374 ~~~a~G~A~~-----G~rp~~~~~~~F~~--~a~dqi~~~~a~~~~pvv~~~~~~g~~g~~G~tH~--~~~d~~~~~~iP 444 (621)
T 2o1s_A 374 VTFAAGLAIG-----GYKPIVAIYSTFLQ--RAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQ--GAFDLSYLRCIP 444 (621)
T ss_dssp HHHHHHHHHT-----TCEEEEEEETTGGG--GGHHHHHHTTTTTTCCCEEEEESCBCCCTTCGGGC--BCSHHHHTTTST
T ss_pred HHHHHHHHHC-----CCEEEEEehHhHHH--HHHHHHHHHHHhcCCCEEEEEECCccCCCCCCccC--chHHHHHHhcCC
Confidence 4456676664 24667777877653 2344557778999999999998777521 233322 223443322222
Q ss_pred CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEE
Q 022717 141 GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEAL 178 (293)
Q Consensus 141 G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~ 178 (293)
|+.++. -.|+.+++..++.|++. .++|++|-..
T Consensus 445 ~l~v~~--P~d~~e~~~~l~~a~~~---~~~Pv~i~~~ 477 (621)
T 2o1s_A 445 EMVIMT--PSDENECRQMLYTGYHY---NDGPSAVRYP 477 (621)
T ss_dssp TCEEEC--CSSHHHHHHHHHHHHHC---CSSCEEEECC
T ss_pred CCEEEe--cCCHHHHHHHHHHHHHc---CCCCEEEEeC
Confidence 565554 44899999999999862 3789988553
No 66
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=92.54 E-value=0.42 Score=46.54 Aligned_cols=109 Identities=13% Similarity=0.048 Sum_probs=68.6
Q ss_pred HHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccc---cccC---ccCcccHHHH
Q 022717 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIST---PISD---QFRSDGAVVK 136 (293)
Q Consensus 63 p~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~---~~~~---~~~~~d~~~~ 136 (293)
-+|.|.|.+. + -.++++..|=|+++ ..-++..|...++|+|+|.-+-...... .... .....+...+
T Consensus 56 ~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~~Pll~itg~~~~~~~~~~~~~~~~~g~~~~q~~~~~ 128 (563)
T 2vk8_A 56 YAADGYARIK---G-MSCIITTFGVGELS---ALNGIAGSYAEHVGVLHVVGVPSISAQAKQLLLHHTLGNGDFTVFHRM 128 (563)
T ss_dssp HHHHHHHHHH---S-CEEEEEETTHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTTSCSSSCSSHHHHH
T ss_pred HHHHHHHHhh---C-CcEEEEcCCCcHHH---HHHHHHHHHhhCCCEEEEECCCChHHhhcccccccccCCcchHHHHHH
Confidence 4566777664 3 34666667888875 3345777888999999998875543210 0000 0011245667
Q ss_pred HhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEee
Q 022717 137 GRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTY 180 (293)
Q Consensus 137 a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~ 180 (293)
++.+--...++. +++++.+.+.+|+..+....||+.|++-..
T Consensus 129 ~~~~~k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~d 170 (563)
T 2vk8_A 129 SANISETTAMIT--DIATAPAEIDRCIRTTYVTQRPVYLGLPAN 170 (563)
T ss_dssp HHTTCSEEEECC--CTTTHHHHHHHHHHHHHHHTSCEEEEEETT
T ss_pred hhhhEEEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEechh
Confidence 777776677775 555566666666666655679999998763
No 67
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=92.47 E-value=0.73 Score=46.12 Aligned_cols=102 Identities=10% Similarity=-0.011 Sum_probs=63.6
Q ss_pred cHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCcccc--ccccCccCcccHHHHHhh
Q 022717 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIS--TPISDQFRSDGAVVKGRA 139 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~--~~~~~~~~~~d~~~~a~a 139 (293)
+++|.|+|+. +.-+++++.+...+. ..++++..++..++|+++++...+++.. .++. .+..|++-+..-
T Consensus 415 v~~a~GlA~~----gG~~P~~~tf~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~~~G~dG~tH--q~~edla~lr~i 485 (669)
T 2r8o_A 415 TAIANGISLH----GGFLPYTSTFLMFVE---YARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTH--QPVEQVASLRVT 485 (669)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGGGGG---TTHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHHTS
T ss_pred HHHHHHHHHc----CCCeEEEeehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCCcCcCCCCCcc--CCHHHHHHhcCC
Confidence 4566676654 223455555544432 2356688899999999999988887643 3333 233444433322
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 140 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 140 ~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
-|+.++ .-.|..++..+++.|++. .++|++|-.
T Consensus 486 P~l~V~--~Pad~~E~~~~l~~a~~~---~~~Pv~i~~ 518 (669)
T 2r8o_A 486 PNMSTW--RPCDQVESAVAWKYGVER---QDGPTALIL 518 (669)
T ss_dssp TTCEEE--CCSSHHHHHHHHHHHHHC---SSSCEEEEC
T ss_pred CCCEEE--ecCCHHHHHHHHHHHHHh---CCCcEEEEe
Confidence 244444 445899999999999862 378999854
No 68
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=92.37 E-value=0.67 Score=46.27 Aligned_cols=102 Identities=15% Similarity=0.085 Sum_probs=63.8
Q ss_pred cHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCcccc--ccccCccCcccHHHHHhh
Q 022717 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIS--TPISDQFRSDGAVVKGRA 139 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~--~~~~~~~~~~d~~~~a~a 139 (293)
+++|.|+|+. |.-++++..+.=.+. -.++++..++..++|+++++.+.+++.. .++. .+..|++-+..-
T Consensus 410 ~~~a~GlA~~----Gg~~P~~~t~~~F~~---~~~~air~~a~~~lpvv~~~t~~g~g~G~dG~tH--q~~edla~lr~i 480 (651)
T 2e6k_A 410 GAILNGLNLH----GGYRAYGGTFLVFSD---YMRPAIRLAALMGVPTVFVFTHDSIALGEDGPTH--QPVEHLMSLRAM 480 (651)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGGGGG---GSHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHHTS
T ss_pred HHHHHHHHHc----CCCEEEEEeHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCcCcc--ccHHHHHHhcCC
Confidence 3466776654 223555655532221 2356688899999999999988887653 3333 233444433322
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 140 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 140 ~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
-|+.++. -.|+.++..+++.|++. .++|++|-.
T Consensus 481 P~l~V~~--Pad~~E~~~~l~~A~~~---~~~Pv~i~~ 513 (651)
T 2e6k_A 481 PNLFVIR--PADAYETFYAWLVALRR---KEGPTALVL 513 (651)
T ss_dssp TTCEEEC--CSSHHHHHHHHHHHHHC---CSSCEEEEC
T ss_pred CCcEEEe--cCCHHHHHHHHHHHHHc---CCCCEEEEE
Confidence 2554444 45899999999999862 268998865
No 69
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=92.35 E-value=0.24 Score=49.25 Aligned_cols=102 Identities=17% Similarity=0.108 Sum_probs=62.8
Q ss_pred cHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCcc-ccccccCccCcccHHHHHhhc
Q 022717 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWA-ISTPISDQFRSDGAVVKGRAY 140 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~-~~~~~~~~~~~~d~~~~a~a~ 140 (293)
+++|+|+|++ .-++++.++.+.. +-.+.+.++.++..++|+++++.+.++. -..++.. ...|++-+..-=
T Consensus 377 ~~~a~G~A~~-----G~rp~~~~~~~F~--~~a~dqi~~~~a~~~~pvv~~~~~~g~~g~dG~tH~--~~~d~a~~r~iP 447 (629)
T 2o1x_A 377 VTTAAGMALQ-----GMRPVVAIYSTFL--QRAYDQVLHDVAIEHLNVTFCIDRAGIVGADGATHN--GVFDLSFLRSIP 447 (629)
T ss_dssp HHHHHHHHHT-----TCEEEEEEEHHHH--GGGHHHHHHTTTTTTCCCEEEEESBBCCCTTCTTTC--BCSHHHHTTTST
T ss_pred HHHHHHHHHc-----CCEEEEEecHHHH--HHHHHHHHHHHhhcCCCEEEEEECCccCCCCCcccC--ccHHHHHHHccC
Confidence 4456666654 2456666666653 2234445677899999999999877652 1223222 223433222222
Q ss_pred CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEE
Q 022717 141 GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEAL 178 (293)
Q Consensus 141 G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~ 178 (293)
|+.++. -.|+.+++..++.|++ .++|++|-..
T Consensus 448 ~l~v~~--P~d~~e~~~~~~~a~~----~~~Pv~i~~~ 479 (629)
T 2o1x_A 448 GVRIGL--PKDAAELRGMLKYAQT----HDGPFAIRYP 479 (629)
T ss_dssp TCEEEC--CSSHHHHHHHHHHHHH----SSSCEEEECC
T ss_pred CcEEEe--cCCHHHHHHHHHHHHh----CCCCEEEEec
Confidence 555554 4589999999999997 3789998653
No 70
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=92.33 E-value=0.24 Score=47.84 Aligned_cols=110 Identities=20% Similarity=0.041 Sum_probs=69.2
Q ss_pred cHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcC
Q 022717 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 141 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G 141 (293)
.-+|.|.|.+. +.-.++++..|=|.++ ..-++..|...++|+|+|.-+-..........|. ..|...+++.+-
T Consensus 51 a~~A~Gyar~t---g~~~v~~~tsGpG~~N---~~~~l~~A~~~~~Pll~itg~~~~~~~~~~~~q~-~~d~~~~~~~~~ 123 (528)
T 1q6z_A 51 VGIADGYAQAS---RKPAFINLHSAAGTGN---AMGALSNAWNSHSPLIVTAGQQTRAMIGVEALLT-NVDAANLPRPLV 123 (528)
T ss_dssp HHHHHHHHHHH---TSCEEEEEEHHHHHHH---THHHHHHHHHTTCCEEEEEEECCHHHHTTTCTTC-CTTGGGSSTTSC
T ss_pred HHHHHHHHHHh---CCCEEEEEcCChHHHH---HHHHHHHHhhcCCCEEEEeCCCcccccCCCcccc-cccHHHHHHHhh
Confidence 34567777654 3445566666778775 2345777888899999998776543221111111 024555555554
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEee
Q 022717 142 VRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALTY 180 (293)
Q Consensus 142 ~~~~~VdG~D~~~v~~a~~~a~~~~r~~~-gP~lIe~~t~ 180 (293)
-...++. +++++...+.+|+..+..+. ||+.|++-..
T Consensus 124 k~~~~v~--~~~~~~~~i~~A~~~a~~~~~GPV~l~iP~d 161 (528)
T 1q6z_A 124 KWSYEPA--SAAEVPHAMSRAIHMASMAPQGPVYLSVPYD 161 (528)
T ss_dssp SCEECCS--SGGGHHHHHHHHHHHHHSSSCCCEEEEEEGG
T ss_pred HhhhcCC--CHHHHHHHHHHHHHHHhcCCCCcEEEEechh
Confidence 4455554 67777888888888777654 7999999764
No 71
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=92.32 E-value=0.78 Score=45.99 Aligned_cols=100 Identities=18% Similarity=0.124 Sum_probs=63.4
Q ss_pred HHHHHHHHHhhhcC-CCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCcccc--ccccCccCcccHHHHHhh
Q 022717 63 PHAVGAAYALKMDR-KDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIS--TPISDQFRSDGAVVKGRA 139 (293)
Q Consensus 63 p~A~G~A~a~k~~~-~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~--~~~~~~~~~~d~~~~a~a 139 (293)
++|.|+|+ .| .-++++.++...+. ..++++..++..++|+++++...+++.. +++. .+..|++-+
T Consensus 428 ~~a~GlA~----~G~~~~P~~~t~~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~tH--q~~edla~l--- 495 (675)
T 1itz_A 428 AICNGIAL----HSPGFVPYCATFFVFTD---YMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTH--QPIEHLVSF--- 495 (675)
T ss_dssp HHHHHHHT----TCTTCEEEEEEEGGGHH---HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHH---
T ss_pred HHHHHHHh----cCCCCEEEEEEHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCCCCc--CcHHHHHHh---
Confidence 35555553 33 24556666544432 3567788899999999999987777643 3333 233444433
Q ss_pred cCceEEEE-eCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 140 YGVRSIRV-DGNDALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 140 ~G~~~~~V-dG~D~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
-.+|.+.| .-.|+.++..+++.|++. .++|++|-.
T Consensus 496 r~iP~l~V~~Pad~~e~~~~l~~a~~~---~~~Pv~i~~ 531 (675)
T 1itz_A 496 RAMPNILMLRPADGNETAGAYKVAVLN---RKRPSILAL 531 (675)
T ss_dssp HSSSSCEEECCCSHHHHHHHHHHHHHC---TTSCEEEEE
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHHh---CCCcEEEEe
Confidence 23555543 456899999999999862 378999854
No 72
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=92.32 E-value=0.42 Score=43.59 Aligned_cols=101 Identities=16% Similarity=0.070 Sum_probs=60.2
Q ss_pred ccHHHHHHHHHhhhcCCCceEEEE-eCcccccchHHHHHHH-HHhhc--------CCCEEEEEEeCCccccccccCccCc
Q 022717 61 QLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALN-FSAVT--------EAPVIFICRNNGWAISTPISDQFRS 130 (293)
Q Consensus 61 ~lp~A~G~A~a~k~~~~~~~vv~~-~GDGa~~~G~~~Eal~-~A~~~--------~lpvi~vi~NN~~~~~~~~~~~~~~ 130 (293)
.+++|.|+|++- -++++.+ ++++.. ..++.+- .++.+ ++|+++++.+.+ +...++. .+.
T Consensus 64 ~~~~a~G~A~~G-----~rp~~~~t~~~F~~---~a~dqi~~~~a~~~~~~~~~~~~pvv~~~~~~g-~~~G~th--~s~ 132 (338)
T 1qs0_B 64 IVGTAVGMGAYG-----LRPVVEIQFADYFY---PASDQIVSEMARLRYRSAGEFIAPLTLRMPCGG-GIYGGQT--HSQ 132 (338)
T ss_dssp HHHHHHHHHHHT-----CEEEEECSCGGGCG---GGHHHHHTTTTTHHHHTTTSSCCCCEEEEEECC-SSSCCSS--SSC
T ss_pred HHHHHHHHHhCC-----CEEEEEeccHhHHH---HHHHHHHHHHHHHhhhcCCCCCCCEEEEEeCCC-CCCCccc--ccc
Confidence 456677777652 2344434 888863 2334443 35432 599999987665 3333322 223
Q ss_pred ccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEE
Q 022717 131 DGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEAL 178 (293)
Q Consensus 131 ~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~ 178 (293)
.|+.-+..--|+.++.- .|+.+.+..++.|++ .++|++|-..
T Consensus 133 ~d~~~l~~iP~l~V~~P--sd~~e~~~~l~~A~~----~~~Pv~i~~p 174 (338)
T 1qs0_B 133 SPEAMFTQVCGLRTVMP--SNPYDAKGLLIASIE----CDDPVIFLEP 174 (338)
T ss_dssp CCHHHHTTSTTCEEECC--CSHHHHHHHHHHHHH----SSSCEEEEEE
T ss_pred cHHHHHhcCCCCEEEee--CCHHHHHHHHHHHHh----cCCcEEEEEc
Confidence 35543332236666654 489999999999986 3789998543
No 73
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=91.97 E-value=0.34 Score=47.45 Aligned_cols=108 Identities=11% Similarity=0.093 Sum_probs=66.8
Q ss_pred HHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCce
Q 022717 64 HAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVR 143 (293)
Q Consensus 64 ~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~ 143 (293)
+|.|.|.+. ++-.++++..|=|+++ ..-++..|...+.|+|+|.-+-..........| ..|...+++.+--.
T Consensus 64 aAdGyAr~t---G~pgv~~~TsGpG~~N---~~~gia~A~~d~vPll~itG~~p~~~~g~~~~Q--e~d~~~~~~~~tk~ 135 (578)
T 3lq1_A 64 FALGLAKAS---KRPVVLLCTSGTAAAN---YFPAVAEANLSQIPLIVLTADRPHELRNVGAPQ--AMDQLHLYGSHVKD 135 (578)
T ss_dssp HHHHHHHHH---CCCEEEEECSSHHHHT---THHHHHHHHHTTCCEEEEEEECCGGGTTSSCTT--CCCCTTTTGGGSSE
T ss_pred HHHHHHHhh---CCCEEEEECCchhhhh---hhHHHHHHHhcCCCeEEEeCCCCHHhhcCCCCC--CcCHhhHHhhheee
Confidence 566776654 4456677777888886 234577888899999999876443221111111 12445555555445
Q ss_pred EEEEe-CCCHHH----HHHHHHHHHHHhhcc-CCcEEEEEEe
Q 022717 144 SIRVD-GNDALA----IYSAVHAAREMAIGE-GRPILIEALT 179 (293)
Q Consensus 144 ~~~Vd-G~D~~~----v~~a~~~a~~~~r~~-~gP~lIe~~t 179 (293)
...|. ..+..+ +..++++|+..++.+ .||+.|++-.
T Consensus 136 ~~~v~~~~~~~~~~~~i~~~l~~A~~~A~~gr~GPV~l~iP~ 177 (578)
T 3lq1_A 136 FTDMALPENSEEMLRYAKWHGSRAVDIAMKTPRGPVHLNFPL 177 (578)
T ss_dssp EEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCCEEEEEEC
T ss_pred EeecCCCCCchHHHHHHHHHHHHHHHHhhCCCCCcEEEECcc
Confidence 56653 334322 445777888777765 6999999975
No 74
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=91.67 E-value=0.72 Score=44.93 Aligned_cols=109 Identities=16% Similarity=0.034 Sum_probs=68.3
Q ss_pred cHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccc---cC--cc-CcccHHH
Q 022717 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI---SD--QF-RSDGAVV 135 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~---~~--~~-~~~d~~~ 135 (293)
.-+|.|.|.+. + -.++++..|=|+++ ..-++..|...++|+|+|.-+......... .. .. ...+...
T Consensus 76 ~~~A~GyAr~t---G-~~v~~~tsGpG~~N---~~~gi~~A~~~~vPlv~itg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (570)
T 2vbf_A 76 SYMADGYARTK---K-AAAFLTTFGVGELS---AINGLAGSYAENLPVVEIVGSPTSKVQNDGKFVHHTLADGDFKHFMK 148 (570)
T ss_dssp HHHHHHHHHHH---S-CEEEEEETTHHHHH---HHHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSSCCCHHHH
T ss_pred HHHHHHHHHHh---C-CeEEEEcCCCCHHH---HHHHHHHHhhhCCCEEEEeCCCCHHHhhccccceeeccccchHHHHH
Confidence 34566766553 4 44666667777765 334577888889999999887665332110 00 00 1113456
Q ss_pred HHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEee
Q 022717 136 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTY 180 (293)
Q Consensus 136 ~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~ 180 (293)
.++.+--...++. + +++...+++|+..+..+.||+.|++-..
T Consensus 149 ~~~~~tk~~~~v~--~-~~~~~~l~~A~~~A~~~~GPV~l~iP~d 190 (570)
T 2vbf_A 149 MHEPVTAARTLLT--A-ENATYEIDRVLSQLLKERKPVYINLPVD 190 (570)
T ss_dssp HTGGGCSEEEECC--T-TTHHHHHHHHHHHHHHHCCCEEEEEEHH
T ss_pred HhhhhEEEEEEEC--c-ccHHHHHHHHHHHHhhCCCCEEEEcchh
Confidence 6777776777775 3 4566666666666666779999999764
No 75
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=91.45 E-value=0.78 Score=46.04 Aligned_cols=101 Identities=16% Similarity=0.118 Sum_probs=62.1
Q ss_pred cHHHHHHHHHhhhcCCCc-eEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCcccc--ccccCccCcccHHHHHh
Q 022717 62 LPHAVGAAYALKMDRKDA-CAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIS--TPISDQFRSDGAVVKGR 138 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~-~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~--~~~~~~~~~~d~~~~a~ 138 (293)
+++|.|+|+. |.-+ +++.++.+-+. ..++++..++..++|++|++...+++.. +++. .+..+++-+.
T Consensus 422 vg~a~GlA~~----Gg~~~P~~~~f~~F~~---~~~~air~~a~~~lpvv~v~t~~g~g~G~dG~tH--q~~edla~lr- 491 (680)
T 1gpu_A 422 GAIMNGISAF----GANYKPYGGTFLNFVS---YAAGAVRLSALSGHPVIWVATHDSIGVGEDGPTH--QPIETLAHFR- 491 (680)
T ss_dssp HHHHHHHHHH----CTTCEEEEEEEHHHHG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHH-
T ss_pred HHHHHHHHhc----CCCceEEEeehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCccccCCCCCcc--CCHHHHHHhc-
Confidence 3456666654 3234 45555533322 2356688899999999999988787643 3433 2334444332
Q ss_pred hcCceEEEE-eCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 139 AYGVRSIRV-DGNDALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 139 a~G~~~~~V-dG~D~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
.+|.++| --.|+.++..+++.|++. .++|++|-.
T Consensus 492 --~iP~l~V~~Pad~~e~~~~l~~A~~~---~~~Pv~i~~ 526 (680)
T 1gpu_A 492 --SLPNIQVWRPADGNEVSAAYKNSLES---KHTPSIIAL 526 (680)
T ss_dssp --TSSSCEEECCCSHHHHHHHHHHHHHC---SSCCEEEEC
T ss_pred --CCCCCEEEecCCHHHHHHHHHHHHHh---CCCcEEEEe
Confidence 3444443 445899999999999862 378999853
No 76
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=91.20 E-value=1.1 Score=44.90 Aligned_cols=103 Identities=12% Similarity=0.026 Sum_probs=64.0
Q ss_pred ccHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCcccc--ccccCccCcccHHHHHh
Q 022717 61 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIS--TPISDQFRSDGAVVKGR 138 (293)
Q Consensus 61 ~lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~--~~~~~~~~~~d~~~~a~ 138 (293)
.+++|+|+|+. +.-++++.++.+-+. ...+.+.+++..++|++|+....+++.. .++. .+..|++-+..
T Consensus 415 ~v~~a~GlA~~----gG~~P~~~tf~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~TH--q~~ed~a~lr~ 485 (663)
T 3kom_A 415 MAAIMNGLSLY----GGIKPYGGTFLVFSD---YSRNAIRMSALMKQPVVHVMSHDSIGLGEDGPTH--QPIEHVPSLRL 485 (663)
T ss_dssp HHHHHHHHHHH----SSCEEEEEEEGGGHH---HHHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHHT
T ss_pred HHHHHHHHHHc----CCCEEEEEehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCccccCCCCCCc--CCHHHHHHHhc
Confidence 34567777764 234556666554432 2356788889999999999988777543 3333 23344443332
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 139 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 139 a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
-=|+.++ --.|+.++..+++.|++ ..++|++|-.
T Consensus 486 iPnl~V~--~Pad~~e~~~~l~~A~~---~~~~Pv~ir~ 519 (663)
T 3kom_A 486 IPNLSVW--RPADTIETMIAWKEAVK---SKDTPSVMVL 519 (663)
T ss_dssp STTCEEE--CCCSHHHHHHHHHHHHH---CSSCCEEEEC
T ss_pred CCCcEEE--eeCCHHHHHHHHHHHHH---hCCCCEEEEc
Confidence 2244444 34588899998988885 2588999843
No 77
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=90.70 E-value=1.4 Score=43.90 Aligned_cols=101 Identities=14% Similarity=-0.007 Sum_probs=63.9
Q ss_pred cHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccc--cccccCccCcccHHHHHhh
Q 022717 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGRA 139 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~--~~~~~~~~~~~d~~~~a~a 139 (293)
+++|.|+|+. +.-++++.++. .|.+ ..++.+.+++..++||+|+....+++. ..++. .+..|++-+..-
T Consensus 395 v~~a~GlA~~----gG~~P~~~~f~--~F~~-~~~~~ir~~a~~~~pv~~~~t~~g~g~G~dG~TH--q~~ed~a~lr~i 465 (632)
T 3l84_A 395 AAINNAFARY----GIFLPFSATFF--IFSE-YLKPAARIAALMKIKHFFIFTHDSIGVGEDGPTH--QPIEQLSTFRAM 465 (632)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEG--GGHH-HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGG--SCSSHHHHHHHS
T ss_pred HHHHHHHHHc----CCCEEEEEecH--HHHH-HHHHHHHHHhccCCCEEEEEECCCcCCCCCCCCC--CCHhHHHHHhcC
Confidence 4567777765 22345666554 3432 345667788999999999998888754 34433 233454433322
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 140 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 140 ~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
=|+.++. -.|+.++..+++.|++ .++|++|-.
T Consensus 466 P~l~V~~--P~d~~e~~~~l~~A~~----~~~Pv~ir~ 497 (632)
T 3l84_A 466 PNFLTFR--PADGVENVKAWQIALN----ADIPSAFVL 497 (632)
T ss_dssp SSCEEEC--CSSHHHHHHHHHHHHH----CSSCEEEEC
T ss_pred CCCEEEe--cCCHHHHHHHHHHHHh----CCCCEEEEE
Confidence 2554443 3488999999999986 588998854
No 78
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=90.26 E-value=1.7 Score=43.49 Aligned_cols=101 Identities=12% Similarity=0.009 Sum_probs=62.1
Q ss_pred HHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCcccc--ccccCccCcccHHHHHhhc
Q 022717 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIS--TPISDQFRSDGAVVKGRAY 140 (293)
Q Consensus 63 p~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~--~~~~~~~~~~d~~~~a~a~ 140 (293)
++|.|+|+. +.-++++.++..-+. -.++++..++..++|+++++...+++.. +++. .+..+++-+..--
T Consensus 416 ~~a~GlA~~----GG~~P~~~~~~~F~~---~~~~~ir~~a~~~~pvv~~~t~~g~g~G~dG~tH--q~~edla~lr~iP 486 (673)
T 1r9j_A 416 AILNGLDAH----DGIIPFGGTFLNFIG---YALGAVRLAAISHHRVIYVATHDSIGVGEDGPTH--QPVELVAALRAMP 486 (673)
T ss_dssp HHHHHHHHH----SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHHHST
T ss_pred HHHHHHHhc----CCCEEEEEehHHHHH---HHHHHHHHHHhcCCCEEEEEECCccCcCCCCccc--CCHHHHHHHcCCC
Confidence 356666654 223455555533332 2345688899999999999987777643 3333 2334444333322
Q ss_pred CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 141 GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 141 G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
|+.++ .-.|+.++..+++.|++. .++|++|-.
T Consensus 487 ~l~V~--~Pad~~e~~~~l~~a~~~---~~~Pv~i~~ 518 (673)
T 1r9j_A 487 NLQVI--RPSDQTETSGAWAVALSS---IHTPTVLCL 518 (673)
T ss_dssp TCEEE--CCSSHHHHHHHHHHHHHC---TTCCEEEEC
T ss_pred CCEEE--eCCCHHHHHHHHHHHHHh---CCCeEEEEE
Confidence 44433 445889999999999862 378999854
No 79
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=89.35 E-value=2.3 Score=42.83 Aligned_cols=99 Identities=15% Similarity=0.079 Sum_probs=61.9
Q ss_pred cHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCcccc--ccccCccCcccHHHHHhh
Q 022717 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIS--TPISDQFRSDGAVVKGRA 139 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~--~~~~~~~~~~d~~~~a~a 139 (293)
+++|.|+|+.. .-++++.++ ..|.+ .....+..++..++|++|+....+++.. +++. .+..+++-+.
T Consensus 461 v~~AaGlA~~~----G~~Pv~~~f--~~F~~-~~~~~ir~~a~~~lpv~~v~thdg~gvG~dG~TH--q~~ed~a~lr-- 529 (711)
T 3uk1_A 461 SAAINGLVLHG----GYKPFGGTF--LTFSD-YSRNALRVAALMKVPSIFVFTHDSIGLGEDGPTH--QSVEHVASLR-- 529 (711)
T ss_dssp HHHHHHHHHHS----SCEEEEEEE--GGGHH-HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHH--
T ss_pred HHHHHHHHHcC----CCEEEEEEh--HHHHH-HHHHHHHHhhhcCCCEEEEEECCCcCcCCCCCcc--CChhHHHHHh--
Confidence 45677777631 234555554 33443 2345677888999999999988876543 3433 2334443322
Q ss_pred cCceEEEE-eCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 022717 140 YGVRSIRV-DGNDALAIYSAVHAAREMAIGEGRPILIE 176 (293)
Q Consensus 140 ~G~~~~~V-dG~D~~~v~~a~~~a~~~~r~~~gP~lIe 176 (293)
.+|.+.| .--|+.++..+++.|++ .++|++|-
T Consensus 530 -~iPnl~V~~Pad~~E~~~~l~~Ai~----~~~Pv~ir 562 (711)
T 3uk1_A 530 -LIPNLDVWRPADTVETAVAWTYAVA----HQHPSCLI 562 (711)
T ss_dssp -TSTTCEEECCSSHHHHHHHHHHHHH----SSSCEEEE
T ss_pred -cCCCCEEEecCCHHHHHHHHHHHHh----cCCCEEEE
Confidence 3444442 44588999999999986 58999884
No 80
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=88.95 E-value=1.2 Score=43.12 Aligned_cols=109 Identities=17% Similarity=0.064 Sum_probs=67.6
Q ss_pred cHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCcccccc---ccC---ccCcccHHH
Q 022717 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP---ISD---QFRSDGAVV 135 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~---~~~---~~~~~d~~~ 135 (293)
.-+|.|.|.+. + -.++++..|=|.++ ..-++..|...++|+|+|.-+-....... ... .....+...
T Consensus 56 ~~~A~Gyar~t---g-~~v~~~tsGpG~~N---~~~gv~~A~~~~~Pll~itg~~p~~~~~~~~~~~~~~g~~~~q~~~~ 128 (552)
T 1ovm_A 56 SYAADGYARCK---G-FAALLTTFGVGELS---AMNGIAGSYAEHVPVLHIVGAPGTAAQQRGELLHHTLGDGEFRHFYH 128 (552)
T ss_dssp HHHHHHHHHHH---S-CEEEEEETTHHHHH---THHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSSCCSHHHH
T ss_pred HHHHHHHHHhh---C-CcEEEEccCCcHHH---HHHHHHHHhhhcCCEEEEECCCCHHHHhcccccccccCCCcHHHHHH
Confidence 34577777664 3 34677777888764 23457788889999999988765432110 000 001124556
Q ss_pred HHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEee
Q 022717 136 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTY 180 (293)
Q Consensus 136 ~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~ 180 (293)
.++.+-.....+. + +.+...+.+|+..+....||+.|++-..
T Consensus 129 ~~~~~tk~~~~v~--~-~~~~~~i~~A~~~a~~~~GPV~l~iP~d 170 (552)
T 1ovm_A 129 MSEPITVAQAVLT--E-QNACYEIDRVLTTMLRERRPGYLMLPAD 170 (552)
T ss_dssp HTGGGCSEEEECC--T-TTHHHHHHHHHHHHHHHTCCEEEEEEHH
T ss_pred HHHhheeEEEEEc--c-ccHHHHHHHHHHHHHhCCCCEEEEeehh
Confidence 7777777777775 3 4455556666655555569999999764
No 81
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=88.86 E-value=2.2 Score=42.88 Aligned_cols=102 Identities=17% Similarity=0.096 Sum_probs=60.9
Q ss_pred cHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccc--cccccCccCcccHHHHHhh
Q 022717 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGRA 139 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~--~~~~~~~~~~~d~~~~a~a 139 (293)
+++|.|+|+. +.-++++..+.-=+. ....++.+++..++||+|++...+++. ..++. .+..+++-+..-
T Consensus 440 v~~A~GlA~~----gG~~P~~~tf~~Fs~---f~~~air~~al~~lpVv~v~~~~gigvG~dG~TH--q~ied~a~lr~i 510 (690)
T 3m49_A 440 GAAMNGIALH----GGLKTYGGTFFVFSD---YLRPAIRLAALMQLPVTYVFTHDSIAVGEDGPTH--EPIEQLAALRAM 510 (690)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGG--CCSSHHHHHHTS
T ss_pred HHHHHHHHHc----CCCEEEEEecHHHHH---HHHHHHHHHHhcCCCcEEEEECCCcCCCCCCCcc--CCHHHHHHHhcC
Confidence 4567777765 123445443322221 123357778999999999999888754 34443 233444433222
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 140 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 140 ~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
=|+.++. -.|+.++..+++.|++. .++|++|-.
T Consensus 511 Pnl~V~~--Pad~~E~~~~l~~Ai~~---~~~Pv~ir~ 543 (690)
T 3m49_A 511 PNVSVIR--PADGNESVAAWRLALES---TNKPTALVL 543 (690)
T ss_dssp TTCEEEC--CSSHHHHHHHHHHHHHC---SSSCEEEEC
T ss_pred CCCEEEe--eCCHHHHHHHHHHHHHc---CCCCEEEEe
Confidence 2454443 44889999999999862 368999843
No 82
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=87.94 E-value=2.1 Score=39.08 Aligned_cols=99 Identities=15% Similarity=0.072 Sum_probs=57.6
Q ss_pred ccHHHHHHHHHhhhcCCCceEEE-EeCcccccchHHHHHHHH-Hh--------hcCCCEEEEEEeCCccc-cccccCccC
Q 022717 61 QLPHAVGAAYALKMDRKDACAVT-YFGDGGTSEGDFHAALNF-SA--------VTEAPVIFICRNNGWAI-STPISDQFR 129 (293)
Q Consensus 61 ~lp~A~G~A~a~k~~~~~~~vv~-~~GDGa~~~G~~~Eal~~-A~--------~~~lpvi~vi~NN~~~~-~~~~~~~~~ 129 (293)
.+++|.|+|++ + -++++. .++|... ..++.+.. ++ ..++|+++++.+ ++.. ..++..+
T Consensus 74 ~v~~a~G~A~~----G-~rp~~~~~f~~F~~---~a~dqi~~~~a~~~y~~~g~~~~pvv~~~~~-G~~g~~G~tHs~-- 142 (341)
T 2ozl_B 74 FAGIAVGAAMA----G-LRPICEFMTFNFSM---QAIDQVINSAAKTYYMSGGLQPVPIVFRGPN-GASAGVAAQHSQ-- 142 (341)
T ss_dssp HHHHHHHHHHT----T-CEEEEECSSGGGGG---GGHHHHHTTTTTHHHHTTSSCCCCCEEEEEC-SCCSSCCGGGCC--
T ss_pred HHHHHHHHHHC----C-CEEEEEeccHHHHH---HHHHHHHHHHHHHHhhccccCCCCEEEEEcC-cCCCCCCcchhh--
Confidence 35566676654 2 344444 3888773 23344443 33 378999999885 4322 2333211
Q ss_pred cccHHHHHhhc-CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEE
Q 022717 130 SDGAVVKGRAY-GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEAL 178 (293)
Q Consensus 130 ~~d~~~~a~a~-G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~ 178 (293)
..+ ...+.. |+.++. -.|+.+++..++.|++ .++|++|-..
T Consensus 143 ~~e--a~l~~iP~l~V~~--Psd~~e~~~~l~~a~~----~~~Pv~i~~~ 184 (341)
T 2ozl_B 143 CFA--AWYGHCPGLKVVS--PWNSEDAKGLIKSAIR----DNNPVVVLEN 184 (341)
T ss_dssp CCH--HHHHTSTTCEEEC--CCSHHHHHHHHHHHHH----SSSCEEEEEC
T ss_pred HHH--HHhccCCCCEEEE--eCCHHHHHHHHHHHHh----cCCCEEEEEC
Confidence 112 223332 555554 4589999999999886 4789998654
No 83
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=87.39 E-value=2.8 Score=38.72 Aligned_cols=100 Identities=16% Similarity=0.023 Sum_probs=52.7
Q ss_pred ccHHHHHHHHHhhhcCCCceEEEE-eCcccccchHHHHHHHHHhhc--------CCCEEEEEEeCCccccccccCccCcc
Q 022717 61 QLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALNFSAVT--------EAPVIFICRNNGWAISTPISDQFRSD 131 (293)
Q Consensus 61 ~lp~A~G~A~a~k~~~~~~~vv~~-~GDGa~~~G~~~Eal~~A~~~--------~lpvi~vi~NN~~~~~~~~~~~~~~~ 131 (293)
.+++|.|+|++ + -++++.+ ++|...- .+.+-++-++.. ++|+++++.+.+..-..++.. ..
T Consensus 110 ~v~~a~G~A~~----G-~rpv~~~tf~~Fl~~--a~Dqi~~~~a~~~~~~~g~~~~pvv~~~~~gg~~g~g~~hs---~~ 179 (369)
T 1ik6_A 110 ILGFAMGMAMA----G-LKPVAEIQFVDFIWL--GADELLNHIAKLRYRSGGNYKAPLVVRTPVGSGTRGGLYHS---NS 179 (369)
T ss_dssp HHHHHHHHHHT----T-CEEEEECCCC----C--CHHHHHHHHHHHHC------CCCCEEEEEECC--------------
T ss_pred HHHHHHHHHHC----C-CeeEEEecchhHHHH--HHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCCCCCCcccc---cc
Confidence 34556666654 2 3444444 8887631 233323335544 999999998776432222211 12
Q ss_pred cHHHHHhhc-CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 132 GAVVKGRAY-GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 132 d~~~~a~a~-G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
+ ..+.+.. |+.++. -.|+.++...++.|++ .++|++|-.
T Consensus 180 ~-~a~l~~iPnl~V~~--Psd~~e~~~ll~~A~~----~~~Pv~i~~ 219 (369)
T 1ik6_A 180 P-EAIFVHTPGLVVVM--PSTPYNAKGLLKAAIR----GDDPVVFLE 219 (369)
T ss_dssp H-HHHHHTCTTCEEEC--CCSHHHHHHHHHHHHH----SSSCEEEEE
T ss_pred H-HHHHcCCCCcEEEe--cCCHHHHHHHHHHHHh----CCCCEEEEE
Confidence 2 2333333 555544 4589999999999886 578999853
No 84
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=86.00 E-value=1.5 Score=42.58 Aligned_cols=107 Identities=14% Similarity=0.013 Sum_probs=65.8
Q ss_pred HHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCc
Q 022717 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 142 (293)
Q Consensus 63 p~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~ 142 (293)
-+|.|.|.+. +.-.++++..|=|+++- .-++..|...+.|+|+|.-+-..........| ..|...+++.+--
T Consensus 60 ~~AdGyAr~t---G~pgv~~~TsGpG~~N~---~~gia~A~~d~vPll~itG~~~~~~~g~~~~Q--~~d~~~~~~~~tk 131 (556)
T 3hww_A 60 HLALGLAKVS---KQPVAVIVTSGTAVANL---YPALIEAGLTGEKLILLTADRPPELIDCGANQ--AIRQPGMFASHPT 131 (556)
T ss_dssp HHHHHHHHHH---CSCEEEEECSSHHHHTT---HHHHHHHHHHCCCEEEEEEECCGGGSSSSCTT--CCCCTTTTTTCSS
T ss_pred HHHHHHHHhh---CCCEEEEECCCcHHHhh---hHHHHHHHHhCCCeEEEeCCCCHHHhccCCCc--cccHHHHHhhhee
Confidence 3466666554 44566777778888862 34577888899999999876654332111111 1244445555544
Q ss_pred eEEEEeC-C---CHHHHHHHHHHHHHHhhccCCcEEEEEEe
Q 022717 143 RSIRVDG-N---DALAIYSAVHAAREMAIGEGRPILIEALT 179 (293)
Q Consensus 143 ~~~~VdG-~---D~~~v~~a~~~a~~~~r~~~gP~lIe~~t 179 (293)
....+.- . .+..+.+++++|+.. ...||+.|++-.
T Consensus 132 ~~~~v~~~~~~~~~~~i~~~i~~A~~~--~r~GPV~i~iP~ 170 (556)
T 3hww_A 132 HSISLPRPTQDIPARWLVSTIDHALGT--LHAGGVHINCPF 170 (556)
T ss_dssp EEEECCCCCTTSCHHHHHHHHHHHHHS--CCSSCEEEEEEC
T ss_pred EEEecCCCcccccHHHHHHHHHHHHhc--CCCCCEEEeCCc
Confidence 5555532 1 235588888888831 236899999975
No 85
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=85.56 E-value=3.1 Score=37.92 Aligned_cols=99 Identities=8% Similarity=0.012 Sum_probs=57.6
Q ss_pred ccHHHHHHHHHhhhcCCCceEEE-EeCcccccchHHHHHHH-HHhhc--------CC-CEEEEEEeCCccccccccCccC
Q 022717 61 QLPHAVGAAYALKMDRKDACAVT-YFGDGGTSEGDFHAALN-FSAVT--------EA-PVIFICRNNGWAISTPISDQFR 129 (293)
Q Consensus 61 ~lp~A~G~A~a~k~~~~~~~vv~-~~GDGa~~~G~~~Eal~-~A~~~--------~l-pvi~vi~NN~~~~~~~~~~~~~ 129 (293)
.+++|.|+|++ + -++++. .++++.. ..++.+. .++.+ ++ |+++++...+. ...++. .+
T Consensus 79 ~v~~a~G~A~~----G-~rp~~~~tf~~F~~---~a~dqi~~~~a~~~~~~~g~~~~~pvv~~~~~~g~-~~G~th--~~ 147 (342)
T 2bfd_B 79 IVGFGIGIAVT----G-ATAIAEIQFADYIF---PAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCV-GHGALY--HS 147 (342)
T ss_dssp HHHHHHHHHHT----T-CCEEEECSSGGGCG---GGHHHHHTTGGGHHHHTTTSSCCTTEEEEEEESCC-SSCGGG--SS
T ss_pred HHHHHHHHHHC----C-CeeEEEecchhHHH---HHHHHHHHHHHHHHhhhcCCccCCCEEEEEecCCC-CCCcch--hh
Confidence 35566676664 2 344443 4888854 2334343 45543 34 99998876543 233332 22
Q ss_pred cccHHHHHhhc-CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 130 SDGAVVKGRAY-GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 130 ~~d~~~~a~a~-G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
..|+.-+ +.. |+.++ .-.|+.+.+..++.|++ .++|++|-.
T Consensus 148 ~~d~~~l-~~iP~l~V~--~Psd~~e~~~~l~~a~~----~~~Pv~i~~ 189 (342)
T 2bfd_B 148 QSPEAFF-AHCPGIKVV--IPRSPFQAKGLLLSCIE----DKNPCIFFE 189 (342)
T ss_dssp CCCHHHH-HTSTTCEEE--CCSSHHHHHHHHHHHHH----SSSCEEEEE
T ss_pred HhHHHHH-hcCCCcEEE--eeCCHHHHHHHHHHHHh----cCCcEEEEe
Confidence 3455333 333 55544 44589999999999986 378999844
No 86
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=85.02 E-value=7.9 Score=34.74 Aligned_cols=99 Identities=14% Similarity=0.043 Sum_probs=57.5
Q ss_pred ccHHHHHHHHHhhhcCCCceEEEE-eCcccccchHHHHHHH-HHhh--------cCCCEEEEEEeCCccccccccCccCc
Q 022717 61 QLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALN-FSAV--------TEAPVIFICRNNGWAISTPISDQFRS 130 (293)
Q Consensus 61 ~lp~A~G~A~a~k~~~~~~~vv~~-~GDGa~~~G~~~Eal~-~A~~--------~~lpvi~vi~NN~~~~~~~~~~~~~~ 130 (293)
.+++|.|+|++- -++++.+ +++... ..++.+. .++. .++|+++++.. +++...... ...
T Consensus 63 ~v~~a~G~A~~G-----~~p~~~~t~~~F~~---~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~~-g~~~~~g~~--hs~ 131 (324)
T 1umd_B 63 IVGAALGMAAHG-----LRPVAEIQFADYIF---PGFDQLVSQVAKLRYRSGGQFTAPLVVRMPS-GGGVRGGHH--HSQ 131 (324)
T ss_dssp HHHHHHHHHHHT-----CEEEEECSSGGGCG---GGHHHHHHTTTTHHHHTTTSSCCCCEEEEEE-CSSSSCGGG--SSC
T ss_pred HHHHHHHHHHCC-----CEEEEEeccHhHHH---HHHHHHHHHHHHHHhhcCCCCcCCEEEEEcC-CCCCCCCCc--cch
Confidence 355677777652 2444443 788763 2344443 3444 68899988873 443322221 112
Q ss_pred ccHHHHHhhc-CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 131 DGAVVKGRAY-GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 131 ~d~~~~a~a~-G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
.+. .+.+.. |+.++. -.|+.+.+..++.|++ .++|++|-.
T Consensus 132 ~~~-a~~~~iP~~~V~~--P~d~~e~~~~l~~a~~----~~~Pv~i~~ 172 (324)
T 1umd_B 132 SPE-AHFVHTAGLKVVA--VSTPYDAKGLLKAAIR----DEDPVVFLE 172 (324)
T ss_dssp CCH-HHHHTSTTCEEEE--CCSHHHHHHHHHHHHH----CSSCEEEEE
T ss_pred hHH-HHHhcCCCCEEEE--eCCHHHHHHHHHHHHh----cCCCEEEEe
Confidence 344 333433 555544 4589999999999985 578998843
No 87
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=84.76 E-value=3.6 Score=37.04 Aligned_cols=99 Identities=12% Similarity=0.012 Sum_probs=56.2
Q ss_pred ccHHHHHHHHHhhhcCCCceEEEE-eCcccccchHHHHHHH-HHhh--------cCCCEEEEEEeCCccccccccCccCc
Q 022717 61 QLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALN-FSAV--------TEAPVIFICRNNGWAISTPISDQFRS 130 (293)
Q Consensus 61 ~lp~A~G~A~a~k~~~~~~~vv~~-~GDGa~~~G~~~Eal~-~A~~--------~~lpvi~vi~NN~~~~~~~~~~~~~~ 130 (293)
.+++|+|+|++ | -++++.+ ++++.. ..++.+. .++. .++|+++++.. +++..... ....
T Consensus 62 ~v~~a~G~A~~----G-~rp~~~~t~~~F~~---~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~~-g~~~~~g~--~hs~ 130 (324)
T 1w85_B 62 IGGLAIGLALQ----G-FRPVPEIQFFGFVY---EVMDSICGQMARIRYRTGGRYHMPITIRSPF-GGGVHTPE--LHSD 130 (324)
T ss_dssp HHHHHHHHHHT----T-CEEEEBCSSGGGGG---GTHHHHHTTGGGHHHHTTTSSCCCCEEEEEE-CSSSCCCT--TSSC
T ss_pred HHHHHHHHHhC----C-CEEEEEecchhHHH---HHHHHHHHHHHHHhhhccCCCcCCEEEEEec-cCCCCCCC--cccc
Confidence 45566676654 2 2344433 777763 2344443 3444 78999988763 44332211 1122
Q ss_pred ccHHHHHhhc-CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 131 DGAVVKGRAY-GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 131 ~d~~~~a~a~-G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
.+. .+.+.. |+.++ .-.|+.+.+..++.|++ .++|++|-.
T Consensus 131 ~~~-a~~~~iP~l~V~--~Psd~~e~~~~l~~a~~----~~~Pv~i~~ 171 (324)
T 1w85_B 131 SLE-GLVAQQPGLKVV--IPSTPYDAKGLLISAIR----DNDPVIFLE 171 (324)
T ss_dssp CCH-HHHTTSTTCEEE--CCSSHHHHHHHHHHHHH----SSSCEEEEE
T ss_pred cHH-HHHccCCCCEEE--eeCCHHHHHHHHHHHHH----cCCCEEEEe
Confidence 333 333332 44444 44589999999999985 578999853
No 88
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=84.16 E-value=3.8 Score=43.88 Aligned_cols=112 Identities=16% Similarity=0.076 Sum_probs=68.7
Q ss_pred cHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcC
Q 022717 62 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 141 (293)
Q Consensus 62 lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G 141 (293)
+.+++|++++ +.++++.+--.++. ...|.|..++-..+|+|+++-+....-. ..+......|+. .++..|
T Consensus 67 ~~aaiGAa~a------GaR~~t~Ts~~Gl~--lm~e~l~~~ag~~~P~Vi~va~R~g~~~-glsi~~~hsd~~-~ar~~G 136 (1231)
T 2c42_A 67 AGAVHGALAA------GALTTTFTASQGLL--LMIPNMYKISGELLPGVFHVTARAIAAH-ALSIFGDHQDIY-AARQTG 136 (1231)
T ss_dssp HHHHHHHHHT------TCCEEEEECHHHHH--HHHHHHHHHHHTTCCCEEEEEECCCCSS-SBCCSCCSHHHH-TTTTSS
T ss_pred HHHHHHHHHc------CChHhhhccHHHHH--HHHHHHHHHhCCCCCEEEEECCCCccCC-CCcCCCchhhHH-HHhcCC
Confidence 4567777765 34555554433443 3457775555567898887777654211 111111112221 255567
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCC
Q 022717 142 VRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHT 186 (293)
Q Consensus 142 ~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t~R~~gHs 186 (293)
++.+. ..++.+.+..+..|++.+.+..-|+++-...+|. +|.
T Consensus 137 ~~vl~--pss~QEa~dl~~~Af~lAek~~~PVi~~~Dg~~~-sh~ 178 (1231)
T 2c42_A 137 FAMLA--SSSVQEAHDMALVAHLAAIESNVPFMHFFDGFRT-SHE 178 (1231)
T ss_dssp CEEEE--CCSHHHHHHHHHHHHHHHHHHCCCEEEEEETTTT-TTC
T ss_pred cEEEE--CCCHHHHHHHHHHHHHHHHHcCCCEEEEecCccc-ccc
Confidence 75554 4589999999999988777789999998888765 454
No 89
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=83.02 E-value=5.5 Score=40.07 Aligned_cols=73 Identities=12% Similarity=0.127 Sum_probs=48.3
Q ss_pred HHHHHhhcCCCEEEEEEeCCcccc--ccccCccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccC--CcE
Q 022717 98 ALNFSAVTEAPVIFICRNNGWAIS--TPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEG--RPI 173 (293)
Q Consensus 98 al~~A~~~~lpvi~vi~NN~~~~~--~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~--gP~ 173 (293)
++.+++..++||+|++...+++.. +++. .+..+++-+..-=|+.++. --|+.++..+++.|++. .+ +|+
T Consensus 474 ~ir~~al~~lpvv~v~thdg~gvG~dG~TH--q~ied~a~lr~iPnl~V~~--Pad~~e~~~~l~~Ai~~---~~~~~Pv 546 (700)
T 3rim_A 474 AVRLAALMDIDTIYVWTHDSIGLGEDGPTH--QPIEHLSALRAIPRLSVVR--PADANETAYAWRTILAR---RNGSGPV 546 (700)
T ss_dssp HHHHHHHHTCCCEEEEECCSGGGCTTCTTT--SCSSHHHHHHTSTTCEEEC--CSSHHHHHHHHHHHHTT---TTCSSCE
T ss_pred HHHHhcCCCCCEEEEEeCCCcccCCCCCcc--CChhHHHHHhcCCCCEEEe--CCCHHHHHHHHHHHHHc---cCCCCCE
Confidence 477889999999999988877543 4443 2344554333222444443 34888999999998862 34 699
Q ss_pred EEEE
Q 022717 174 LIEA 177 (293)
Q Consensus 174 lIe~ 177 (293)
+|-.
T Consensus 547 ~ir~ 550 (700)
T 3rim_A 547 GLIL 550 (700)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9853
No 90
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=74.82 E-value=12 Score=30.54 Aligned_cols=87 Identities=15% Similarity=0.037 Sum_probs=49.1
Q ss_pred cHHHHHHHHHhhhcC---CCceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCcccccccc------------C
Q 022717 62 LPHAVGAAYALKMDR---KDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPIS------------D 126 (293)
Q Consensus 62 lp~A~G~A~a~k~~~---~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~------------~ 126 (293)
.....|+..|.+... ....+++++.||....+...+.+..+...+.+|..|-.-+.-+...+.. .
T Consensus 92 T~l~~al~~a~~~l~~~~~~~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~~~~~~~~~~g~~~~~~~~~g~~ 171 (218)
T 3ibs_A 92 TAIGEAINLATRSFTPQEGVGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDYRRDREGNV 171 (218)
T ss_dssp CCHHHHHHHHHTTSCSCSSCCEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSCB
T ss_pred CcHHHHHHHHHHHHhhCCCCCcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecCCCCCcccccCCCceeEcCCCCE
Confidence 334444444444322 3467899999999877766777777777777655554432111000000 0
Q ss_pred ---ccCcccHHHHHhhcCceEEEEe
Q 022717 127 ---QFRSDGAVVKGRAYGVRSIRVD 148 (293)
Q Consensus 127 ---~~~~~d~~~~a~a~G~~~~~Vd 148 (293)
......+.++|+.-|..++.++
T Consensus 172 ~~~~~~~~~L~~iA~~~gG~~~~~~ 196 (218)
T 3ibs_A 172 IVTRLNEGMCQEIAKDGKGIYVRVD 196 (218)
T ss_dssp CEECCCHHHHHHHHHHTEEEEEEEC
T ss_pred eEecCCHHHHHHHHHhcCCEEEECC
Confidence 1112235677888888888876
No 91
>2zzd_B Thiocyanate hydrolase subunit beta; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dd4_B 2dxb_B 2dd5_B* 2dxc_B*
Probab=68.33 E-value=7.8 Score=31.47 Aligned_cols=36 Identities=6% Similarity=0.042 Sum_probs=30.2
Q ss_pred HHHHHhCCCcHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q 022717 200 IEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 241 (293)
Q Consensus 200 ~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~ 241 (293)
++.|- ..+.+.|+++|++|++|+++..++++++...
T Consensus 109 Ye~WL------~ALe~lLvekGvit~~EL~ar~aEv~ar~~~ 144 (157)
T 2zzd_B 109 YGRWL------LTAARILVDKQFVTLTELHNKIVEMRERVAS 144 (157)
T ss_dssp HHHHH------HHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHH------HHHHHHHHHcCCCCHHHHHHHHHHHHHhhhc
Confidence 55664 6689999999999999999999999888644
No 92
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=67.79 E-value=16 Score=37.73 Aligned_cols=106 Identities=10% Similarity=0.068 Sum_probs=58.1
Q ss_pred ccHHHHHHHHHhhhcCCCceEEEEeCcccccchH---HHHHHHHHh-hc--CCCEEEEEEeCCccccccccCccCcccHH
Q 022717 61 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGD---FHAALNFSA-VT--EAPVIFICRNNGWAISTPISDQFRSDGAV 134 (293)
Q Consensus 61 ~lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~---~~Eal~~A~-~~--~lpvi~vi~NN~~~~~~~~~~~~~~~d~~ 134 (293)
.++.|+|+|++ +++.+++.-.-=|.|..+. +-+=++.+. .| ++||++++...+.+ .++...+ ..+.
T Consensus 596 ~vG~a~G~A~~----G~~~~~i~eaqf~dF~~~AQ~~~DQ~i~~~~~k~~~~~~vvi~~p~G~~G-~Gp~Hs~---~~~E 667 (868)
T 2yic_A 596 AVGFEYGYSVG----NPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEG-QGPDHTS---GRIE 667 (868)
T ss_dssp HHHHHHHHHHH----CTTSEEEEECSSGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSS-SCTTSSC---CCHH
T ss_pred HHHHHHHHHcc----CCCCceEEEEehHHHHhhHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCC-CChhhcC---CcHH
Confidence 34456666554 4555555544445555443 333222221 13 67999988865533 3333222 2244
Q ss_pred HHHhhcCceEEEE-eCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 022717 135 VKGRAYGVRSIRV-DGNDALAIYSAVHAAREMAIGEGRPILIE 176 (293)
Q Consensus 135 ~~a~a~G~~~~~V-dG~D~~~v~~a~~~a~~~~r~~~gP~lIe 176 (293)
.++.-..+|.++| .-.|+.+....++.++. +..++|++|-
T Consensus 668 ~~l~l~~~pnm~V~~Ps~p~~~~~lLr~a~~--~~~~~Pvii~ 708 (868)
T 2yic_A 668 RFLQLWAEGSMTIAMPSTPANYFHLLRRHGK--DGIQRPLIVF 708 (868)
T ss_dssp HHHHHCCTTSCEEECCCSHHHHHHHHHHHHH--SSCCCCEEEE
T ss_pred HHHhcCCCCCCEEEEeCCHHHHHHHHHHHHh--cCCCCcEEEE
Confidence 4454444555553 55689999999988775 2235898763
No 93
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=66.29 E-value=16 Score=38.67 Aligned_cols=107 Identities=10% Similarity=0.076 Sum_probs=59.3
Q ss_pred ccHHHHHHHHHhhhcCCCceEEEEeCcccccchH---HHHHHHHHh---hcCCCEEEEEEeCCccccccccCccCcccHH
Q 022717 61 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGD---FHAALNFSA---VTEAPVIFICRNNGWAISTPISDQFRSDGAV 134 (293)
Q Consensus 61 ~lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~---~~Eal~~A~---~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~ 134 (293)
.++.|+|+|++ +++.+++.-+-=|.|.++. +-+=++.+. ..++||++++...+.+ .++...+ ..+.
T Consensus 841 ~vg~a~G~A~~----G~~~~~i~Eaqf~dF~~~aQ~~~DQ~i~~~~~k~~~~~~vv~~lp~G~~G-~G~~Hs~---~~~E 912 (1113)
T 2xt6_A 841 AVGFEYGYSVG----NPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEG-QGPDHTS---GRIE 912 (1113)
T ss_dssp HHHHHHHHHHH----CTTSEEEEECSSGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSS-SCTTSSC---CCHH
T ss_pred HHHHHHHHHhc----CCCCceEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCCC-CChhhhc---ccHH
Confidence 34455555554 4555565544445555443 333222221 2268999999865533 3333222 2244
Q ss_pred HHHhhcCceEEEE-eCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 135 VKGRAYGVRSIRV-DGNDALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 135 ~~a~a~G~~~~~V-dG~D~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
.++.-..+|.++| .-.|+.+.+..++.++. +..++|++|--
T Consensus 913 ~~l~l~~~pnm~V~~Ps~~~~~~~lLr~a~~--~~~~~Pvii~~ 954 (1113)
T 2xt6_A 913 RFLQLWAEGSMTIAMPSTPANYFHLLRRHGK--DGIQRPLIVFT 954 (1113)
T ss_dssp HHHHHCCTTSCEEECCSSHHHHHHHHHHHHH--SSCCCCEEEEE
T ss_pred HHHhcCCCCCcEEEecCCHHHHHHHHHHHHh--ccCCCCEEEEe
Confidence 4454444555553 45689999999988775 22358988733
No 94
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=65.27 E-value=17 Score=37.78 Aligned_cols=104 Identities=15% Similarity=0.187 Sum_probs=56.9
Q ss_pred ccHHHHHHHHHhhhcCCCceEEE--EeCcccccch---HHHHHHHHH-hhc--CCCEEEEEEeCCccccccccCccCccc
Q 022717 61 QLPHAVGAAYALKMDRKDACAVT--YFGDGGTSEG---DFHAALNFS-AVT--EAPVIFICRNNGWAISTPISDQFRSDG 132 (293)
Q Consensus 61 ~lp~A~G~A~a~k~~~~~~~vv~--~~GDGa~~~G---~~~Eal~~A-~~~--~lpvi~vi~NN~~~~~~~~~~~~~~~d 132 (293)
.++.|.|+|++ ++...+|+ .+|| |.+| .+-+-++.+ +.| ++||++++.. +|.-.++.. .+..
T Consensus 664 ~vg~a~G~A~~----G~~~lpv~e~qf~d--F~~~AQra~DQii~~~~ak~~~~~~vv~~l~~-G~~g~G~~H---ss~~ 733 (933)
T 2jgd_A 664 VLAFEYGYATA----EPRTLTIWEAQFGD--FANGAQVVIDQFISSGEQKWGRMCGLVMLLPH-GYEGQGPEH---SSAR 733 (933)
T ss_dssp HHHHHHHHHHH----CTTSEEEEEC-CGG--GGGGGHHHHHHTTTTHHHHHCCCCCCEEEEEC-CCSSSCTTS---SCCC
T ss_pred HHHHHHHHHhc----CCCCCCEEEEEEhh--hhcccHHHHHHHHHHHHHHHccCCCEEEEEeC-CCCCCCccc---ccch
Confidence 34455565554 44534443 4554 4433 233323333 344 7899998886 553323332 1222
Q ss_pred HHHHHhhcCceEEEE-eCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 022717 133 AVVKGRAYGVRSIRV-DGNDALAIYSAVHAAREMAIGEGRPILIE 176 (293)
Q Consensus 133 ~~~~a~a~G~~~~~V-dG~D~~~v~~a~~~a~~~~r~~~gP~lIe 176 (293)
+..++....+|.++| .-.|+.+....++.++. +..++|++|-
T Consensus 734 ~E~~l~~~~~pnm~V~~Pst~~e~~~lLr~a~~--~~~~~Pvii~ 776 (933)
T 2jgd_A 734 LERYLQLCAEQNMQVCVPSTPAQVYHMLRRQAL--RGMRRPLVVM 776 (933)
T ss_dssp HHHHHHTCCTTCCEEECCCSHHHHHHHHHHHHH--SSCCCCEEEE
T ss_pred HHHHHHHhCCCCeEEEecCCHHHHHHHHHHHHH--hcCCCcEEEE
Confidence 445555554555553 55689999998888742 2347899983
No 95
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=63.21 E-value=8.8 Score=29.69 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=29.1
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcE
Q 022717 139 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPI 173 (293)
Q Consensus 139 a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~ 173 (293)
+.|.-.++..|.|.+++..++++.+..+|++.|.+
T Consensus 81 gsgvm~i~f~gddlea~ekalkemirqarkfagtv 115 (170)
T 4hhu_A 81 GSGVMVIVFEGDDLEALEKALKEMIRQARKFAGTV 115 (170)
T ss_dssp TCCEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CceEEEEEEecCcHHHHHHHHHHHHHHHHhhcceE
Confidence 34555677789999999999999999999988754
No 96
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=58.68 E-value=14 Score=28.53 Aligned_cols=33 Identities=24% Similarity=0.234 Sum_probs=28.4
Q ss_pred CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcE
Q 022717 141 GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPI 173 (293)
Q Consensus 141 G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~ 173 (293)
|.-.++..|.|.+++..++++.+..+|++.|.+
T Consensus 2 gvm~i~f~gddlea~ekalkemirqarkfagtv 34 (170)
T 4hhu_A 2 GVMVIVFEGDDLEALEKALKEMIRQARKFAGTV 34 (170)
T ss_dssp CEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred ceEEEEEecCcHHHHHHHHHHHHHHHHhhcceE
Confidence 555677889999999999999999999988754
No 97
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=58.43 E-value=19 Score=22.80 Aligned_cols=24 Identities=8% Similarity=0.153 Sum_probs=11.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHH
Q 022717 224 NGDIESELRSSVRKQILHALQEAE 247 (293)
Q Consensus 224 ~~~~~~~i~~~~~~~v~~a~~~a~ 247 (293)
+..+++.+++++-+++...+..++
T Consensus 5 ~~~dle~~KqEIL~E~RkElqK~K 28 (45)
T 1use_A 5 DYSDLQRVKQELLEEVKKELQKVK 28 (45)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555555444444444
No 98
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=58.38 E-value=14 Score=25.34 Aligned_cols=29 Identities=24% Similarity=0.204 Sum_probs=25.0
Q ss_pred EEEeCCCHHHHHHHHHHHHHHhhccCCcE
Q 022717 145 IRVDGNDALAIYSAVHAAREMAIGEGRPI 173 (293)
Q Consensus 145 ~~VdG~D~~~v~~a~~~a~~~~r~~~gP~ 173 (293)
++..|.|.+++..++++.+..+|++.|.+
T Consensus 5 irfrgddleafekalkemirqarkfagtv 33 (85)
T 2kl8_A 5 IRFRGDDLEAFEKALKEMIRQARKFAGTV 33 (85)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTTTCEE
T ss_pred eeecCCcHHHHHHHHHHHHHHHHhhcceE
Confidence 45678899999999999999999988743
No 99
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=46.56 E-value=27 Score=24.34 Aligned_cols=23 Identities=17% Similarity=0.362 Sum_probs=17.5
Q ss_pred CCcHHHHHHHHHHCCCCCHHHHHH
Q 022717 207 QDPVTRFRKWIESNGWWNGDIESE 230 (293)
Q Consensus 207 ~dPi~~~~~~L~~~g~~~~~~~~~ 230 (293)
.-|+..=.++|..+| +|++|+++
T Consensus 32 ~sp~~~K~~FL~sKG-Lt~eEI~~ 54 (70)
T 2w84_A 32 QSPLATRRAFLKKKG-LTDEEIDM 54 (70)
T ss_dssp GSCHHHHHHHHHHTT-CCHHHHHH
T ss_pred hCCHHHHHHHHHHcC-CCHHHHHH
Confidence 357888889999999 68865543
No 100
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=46.05 E-value=33 Score=29.00 Aligned_cols=56 Identities=25% Similarity=0.310 Sum_probs=35.5
Q ss_pred CCceEEEEeCcccccchHHHHHHHHHhhc-CCC--EEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeC
Q 022717 77 KDACAVTYFGDGGTSEGDFHAALNFSAVT-EAP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG 149 (293)
Q Consensus 77 ~~~~vv~~~GDGa~~~G~~~Eal~~A~~~-~lp--vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG 149 (293)
+.+++|.+.|.|+..+ ++--+... .+| |+.|+.|+.-+ .-.++|+.+|+|++.++-
T Consensus 8 ~~ri~vl~SG~gsnl~-----all~~~~~~~~~~~I~~Vis~~~~a------------~~l~~A~~~gIp~~~~~~ 66 (215)
T 3kcq_A 8 ELRVGVLISGRGSNLE-----ALAKAFSTEESSVVISCVISNNAEA------------RGLLIAQSYGIPTFVVKR 66 (215)
T ss_dssp CEEEEEEESSCCHHHH-----HHHHHTCCC-CSEEEEEEEESCTTC------------THHHHHHHTTCCEEECCB
T ss_pred CCEEEEEEECCcHHHH-----HHHHHHHcCCCCcEEEEEEeCCcch------------HHHHHHHHcCCCEEEeCc
Confidence 4467888999988753 23333333 354 77777764211 124689999999998764
No 101
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=44.77 E-value=69 Score=26.86 Aligned_cols=71 Identities=23% Similarity=0.274 Sum_probs=42.0
Q ss_pred CCceEEEEeCcccccchHHHHHHHHHhhc-CCC--EEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeCC---
Q 022717 77 KDACAVTYFGDGGTSEGDFHAALNFSAVT-EAP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN--- 150 (293)
Q Consensus 77 ~~~~vv~~~GDGa~~~G~~~Eal~~A~~~-~lp--vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~--- 150 (293)
+.+++|.+.|.|+..+ ++--+... ++| |+.|+.|+.-+ .-.++|+.+|+|++.++-.
T Consensus 7 ~~ri~vl~SG~gsnl~-----all~~~~~~~l~~~I~~Visn~~~a------------~~l~~A~~~gIp~~~~~~~~~~ 69 (209)
T 4ds3_A 7 RNRVVIFISGGGSNME-----ALIRAAQAPGFPAEIVAVFSDKAEA------------GGLAKAEAAGIATQVFKRKDFA 69 (209)
T ss_dssp CEEEEEEESSCCHHHH-----HHHHHHTSTTCSEEEEEEEESCTTC------------THHHHHHHTTCCEEECCGGGSS
T ss_pred CccEEEEEECCcHHHH-----HHHHHHHcCCCCcEEEEEEECCccc------------HHHHHHHHcCCCEEEeCccccC
Confidence 3467888999988754 23333333 455 77777764211 1146899999999988632
Q ss_pred CHHHHHHHHHHHHH
Q 022717 151 DALAIYSAVHAARE 164 (293)
Q Consensus 151 D~~~v~~a~~~a~~ 164 (293)
+-++..+.+.+.++
T Consensus 70 ~r~~~d~~~~~~l~ 83 (209)
T 4ds3_A 70 SKEAHEDAILAALD 83 (209)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 33444444444443
No 102
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=44.11 E-value=85 Score=26.43 Aligned_cols=54 Identities=11% Similarity=0.035 Sum_probs=34.0
Q ss_pred CceEEEEeCcccccchHHHHHHHHHhhcCCC--EEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEe
Q 022717 78 DACAVTYFGDGGTSEGDFHAALNFSAVTEAP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVD 148 (293)
Q Consensus 78 ~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lp--vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~Vd 148 (293)
.+++|.+.|.|+..+ +|--+...+++ |+.|+.|+.-+ .-.++|+.+|+|++.++
T Consensus 6 ~riavl~SG~Gsnl~-----all~~~~~~~~~eI~~Vis~~~~a------------~~~~~A~~~gIp~~~~~ 61 (215)
T 3tqr_A 6 LPIVVLISGNGTNLQ-----AIIGAIQKGLAIEIRAVISNRADA------------YGLKRAQQADIPTHIIP 61 (215)
T ss_dssp EEEEEEESSCCHHHH-----HHHHHHHTTCSEEEEEEEESCTTC------------HHHHHHHHTTCCEEECC
T ss_pred cEEEEEEeCCcHHHH-----HHHHHHHcCCCCEEEEEEeCCcch------------HHHHHHHHcCCCEEEeC
Confidence 356777778887754 33333333354 77777764311 11468999999999985
No 103
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=44.00 E-value=63 Score=28.27 Aligned_cols=72 Identities=14% Similarity=0.109 Sum_probs=44.2
Q ss_pred EEEeCcccc--cchHHHHHHHHHhhcCCCEEEEEEeCCcccccccc---CccCc---ccHHHHHhhcCceEEEEeCCCHH
Q 022717 82 VTYFGDGGT--SEGDFHAALNFSAVTEAPVIFICRNNGWAISTPIS---DQFRS---DGAVVKGRAYGVRSIRVDGNDAL 153 (293)
Q Consensus 82 v~~~GDGa~--~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~---~~~~~---~d~~~~a~a~G~~~~~VdG~D~~ 153 (293)
|+|--||+. +.|.++-+|.+|..++ .+.|+|.+..-.+..... ..... .++.+..+..+...+.+|..+..
T Consensus 3 i~ir~Da~~~IG~GHvmRcl~LA~~l~-~v~F~~~~~~~~~~~~~g~~v~~l~~~d~~~~~~~l~~~~~d~lIvD~Y~~~ 81 (282)
T 3hbm_A 3 VLFRSDSSSQIGFGHIKRDLVLAKQYS-DVSFACLPLEGSLIDEIPYPVYELSSESIYELINLIKEEKFELLIIDHYGIS 81 (282)
T ss_dssp EEEEECCBTTTBSHHHHHHHHHHTTCS-SEEEEECCCTTCCGGGCCSCEEECSSSCHHHHHHHHHHHTCSEEEEECTTCC
T ss_pred EEEEEecCCCccccHHHHHHHHHHHHH-hCEEEEecCcHhHHHHCCCeEEEcCccCHHHHHHHHHhCCCCEEEEECCCCC
Confidence 556667775 7889999999999998 899998764211110000 00111 23344455567788888876654
Q ss_pred H
Q 022717 154 A 154 (293)
Q Consensus 154 ~ 154 (293)
.
T Consensus 82 ~ 82 (282)
T 3hbm_A 82 V 82 (282)
T ss_dssp H
T ss_pred H
Confidence 4
No 104
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=42.49 E-value=1.2e+02 Score=23.66 Aligned_cols=59 Identities=15% Similarity=0.131 Sum_probs=35.1
Q ss_pred cCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeC-CCHHHHHHHHHHHHHHhh
Q 022717 105 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG-NDALAIYSAVHAAREMAI 167 (293)
Q Consensus 105 ~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG-~D~~~v~~a~~~a~~~~r 167 (293)
.+.|+|+|.+--.. ............++++.+|++.+.+.. .+-..+.+.+...++.++
T Consensus 126 ~~~piilv~nK~Dl----~~~~~v~~~~~~~~~~~~~~~~~e~Sa~~~g~gv~~lf~~l~~~i~ 185 (187)
T 3c5c_A 126 RSIPALLLGNKLDM----AQYRQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVREAR 185 (187)
T ss_dssp CCCCEEEEEECGGG----GGGCSSCHHHHHHHHHHHTCEEEECCSSSCSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECcch----hhcCccCHHHHHHHHHHcCCcEEEEeecCccccHHHHHHHHHHHHh
Confidence 36787766553221 111122223456778888999999887 666666666666665543
No 105
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=42.00 E-value=31 Score=29.61 Aligned_cols=69 Identities=7% Similarity=0.163 Sum_probs=51.3
Q ss_pred cCCCceEEEEeCcccc--cchHHHHHHHHHhhcCC-CEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEe
Q 022717 75 DRKDACAVTYFGDGGT--SEGDFHAALNFSAVTEA-PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVD 148 (293)
Q Consensus 75 ~~~~~~vv~~~GDGa~--~~G~~~Eal~~A~~~~l-pvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~Vd 148 (293)
..|+.+.....=+|+. ..|....++.+|..-+| |.-+||+ +........+.+++.++|+-+|++.+.+.
T Consensus 143 ~rPGHVfPL~A~~gGVl~R~GHTEaaVdLarlAGl~Pa~VicE-----i~~ddG~mar~~~l~~fA~~h~l~~iti~ 214 (227)
T 1snn_A 143 RSPGSVTLLRAAEGLVKNRQGHTEMTVALAELANLVPITTICE-----MMGDDGNAMSKNETKRYAEKHNLIYLSGE 214 (227)
T ss_dssp EEEEEEEEEECCTTGGGTCCSHHHHHHHHHHHTTSCSEEEEEE-----EBCTTSSBCCHHHHHHHHHHHTCCEEEHH
T ss_pred CCCCCceeEEeCCCCEeeCCCchHHHHHHHHHcCCCceEEEEE-----EeCCCCCcCCHHHHHHHHHHcCCcEEEHH
Confidence 3466777777778876 57888888999999999 7777766 22222233456788999999999999865
No 106
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=41.17 E-value=36 Score=22.41 Aligned_cols=25 Identities=16% Similarity=0.264 Sum_probs=19.2
Q ss_pred CCcHHHHHHHHHHCCCCCHHHHHHHH
Q 022717 207 QDPVTRFRKWIESNGWWNGDIESELR 232 (293)
Q Consensus 207 ~dPi~~~~~~L~~~g~~~~~~~~~i~ 232 (293)
.-|+..=..+|..+| +|++|+++.-
T Consensus 27 ~sp~~~K~~FL~sKG-Lt~~EI~~Al 51 (54)
T 3ff5_A 27 QSPLATRRAFLKKKG-LTDEEIDLAF 51 (54)
T ss_dssp GSCHHHHHHHHHHTT-CCHHHHHHHH
T ss_pred cCCHHHHHHHHHHcC-CCHHHHHHHH
Confidence 357888889999999 7887776543
No 107
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=41.07 E-value=64 Score=26.05 Aligned_cols=78 Identities=10% Similarity=0.019 Sum_probs=47.6
Q ss_pred HhhcCC---C--EEEEEEeCCccccccccCcc----CcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCc
Q 022717 102 SAVTEA---P--VIFICRNNGWAISTPISDQF----RSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRP 172 (293)
Q Consensus 102 A~~~~l---p--vi~vi~NN~~~~~~~~~~~~----~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP 172 (293)
+..|++ | +.+||+|-.|.-.+...... ....+.+..+.+|+.+...+--...++.+.+++..++.......
T Consensus 23 ~~~Y~m~~~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~~dh~~~d 102 (167)
T 1pyo_A 23 QLAYRLQSRPRGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYDVHVLCDQTAQEMQEKLQNFAQLPAHRVTD 102 (167)
T ss_dssp GGBCCCCCSSSEEEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHTTEEEEEEESCCHHHHHHHHHHHHTCGGGGTSS
T ss_pred cccccCCCCCceEEEEEeCcccCCCCCCccCCCcHHHHHHHHHHHHHCCCEEEEeeCCCHHHHHHHHHHhhhhhhccCCC
Confidence 455654 3 66667666664322111111 12356778899999998887778888988888876421223556
Q ss_pred EEEEEEe
Q 022717 173 ILIEALT 179 (293)
Q Consensus 173 ~lIe~~t 179 (293)
++|-+..
T Consensus 103 c~vv~il 109 (167)
T 1pyo_A 103 SCIVALL 109 (167)
T ss_dssp EEEEEEE
T ss_pred EEEEEeC
Confidence 7766644
No 108
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=40.47 E-value=96 Score=25.85 Aligned_cols=82 Identities=13% Similarity=0.099 Sum_probs=46.3
Q ss_pred ceEEEEeCcccccchHHHHHHHHHhhcCC--CEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeCC---CHH
Q 022717 79 ACAVTYFGDGGTSEGDFHAALNFSAVTEA--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN---DAL 153 (293)
Q Consensus 79 ~~vv~~~GDGa~~~G~~~Eal~~A~~~~l--pvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~---D~~ 153 (293)
+++|++.|-|++.+- . |......++ .++.|+.|+.- ....++|+.+|+|++.++-. +.+
T Consensus 5 ki~vl~sG~g~~~~~-~---l~~l~~~~l~~~I~~Vit~~~~------------~~v~~~A~~~gIp~~~~~~~~~~~~~ 68 (212)
T 3av3_A 5 RLAVFASGSGTNFQA-I---VDAAKRGDLPARVALLVCDRPG------------AKVIERAARENVPAFVFSPKDYPSKA 68 (212)
T ss_dssp EEEEECCSSCHHHHH-H---HHHHHTTCCCEEEEEEEESSTT------------CHHHHHHHHTTCCEEECCGGGSSSHH
T ss_pred EEEEEEECCcHHHHH-H---HHHHHhCCCCCeEEEEEeCCCC------------cHHHHHHHHcCCCEEEeCcccccchh
Confidence 578888999887542 2 222223334 46667766321 13567899999999987532 333
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEee
Q 022717 154 AIYSAVHAAREMAIGEGRPILIEALTY 180 (293)
Q Consensus 154 ~v~~a~~~a~~~~r~~~gP~lIe~~t~ 180 (293)
+..+.+.+.++ + -+|=+|.+.-|
T Consensus 69 ~~~~~~~~~l~---~-~~~Dliv~a~y 91 (212)
T 3av3_A 69 AFESEILRELK---G-RQIDWIALAGY 91 (212)
T ss_dssp HHHHHHHHHHH---H-TTCCEEEESSC
T ss_pred hhHHHHHHHHH---h-cCCCEEEEchh
Confidence 33334444443 2 34655555444
No 109
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=38.49 E-value=1.1e+02 Score=23.35 Aligned_cols=62 Identities=3% Similarity=0.067 Sum_probs=37.1
Q ss_pred cCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccC
Q 022717 105 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEG 170 (293)
Q Consensus 105 ~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~ 170 (293)
.+.|+++|++--.. ............++++.+|++.+.+...+-..+.+.+....+.+.+.+
T Consensus 110 ~~~p~ilv~nK~Dl----~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~v~~l~~~l~~~~~~~~ 171 (181)
T 3t5g_A 110 VQIPIMLVGNKKDL----HMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEKMD 171 (181)
T ss_dssp --CCEEEEEECTTC----TTTCCSCHHHHHHHHHHTTCEEEECCTTSHHHHHHHHHHHHHHHHTC-
T ss_pred CCCCEEEEEECccc----hhcceecHHHHHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHHHHhc
Confidence 35687766643221 111222233456778889999999987777777777777666555433
No 110
>3hht_B NitrIle hydratase beta subunit; alpha and beta proteins (A+B), lyase; 1.16A {Geobacillus pallidus} SCOP: b.34.4.4 PDB: 2dpp_B 1v29_B
Probab=38.27 E-value=66 Score=27.55 Aligned_cols=29 Identities=10% Similarity=0.074 Sum_probs=24.3
Q ss_pred HHHHHhCCCcHHHHHHHHHHCCCCCHHHHHHHHHH
Q 022717 200 IEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSS 234 (293)
Q Consensus 200 ~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~ 234 (293)
++.|- ..+.+.|+++|++|++|+++..++
T Consensus 73 Ye~WL------~ale~lLvekGvit~~EL~~r~~~ 101 (229)
T 3hht_B 73 YGHWI------ATVAYNLVDTGVLDEKELDERTEV 101 (229)
T ss_dssp HHHHH------HHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred HHHHH------HHHHHHHHHcCCCCHHHHHHHHHh
Confidence 67775 568999999999999999887665
No 111
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=38.22 E-value=1.1e+02 Score=27.19 Aligned_cols=53 Identities=11% Similarity=-0.035 Sum_probs=34.8
Q ss_pred CCceEEEEeCcccccchHHHHHHHHHhhc-CCC--EEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEe
Q 022717 77 KDACAVTYFGDGGTSEGDFHAALNFSAVT-EAP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVD 148 (293)
Q Consensus 77 ~~~~vv~~~GDGa~~~G~~~Eal~~A~~~-~lp--vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~Vd 148 (293)
+.+++|.+.|.|+.. ++|-.+... .+| |..|+.|+. +...+|+.+|+|++.++
T Consensus 105 ~~ri~vl~Sg~g~nl-----~~ll~~~~~g~l~~~I~~Visn~~--------------~~~~~A~~~gIp~~~~~ 160 (302)
T 3o1l_A 105 KKRVVLMASRESHCL-----ADLLHRWHSDELDCDIACVISNHQ--------------DLRSMVEWHDIPYYHVP 160 (302)
T ss_dssp CCEEEEEECSCCHHH-----HHHHHHHHTTCSCSEEEEEEESSS--------------TTHHHHHTTTCCEEECC
T ss_pred CcEEEEEEeCCchhH-----HHHHHHHHCCCCCcEEEEEEECcH--------------HHHHHHHHcCCCEEEcC
Confidence 446777778887643 345444443 355 777777653 24567899999999984
No 112
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=38.12 E-value=1.5e+02 Score=24.76 Aligned_cols=80 Identities=21% Similarity=0.141 Sum_probs=44.3
Q ss_pred ceEEEEeCcccccchHHHHHHHHHhhcCCC--EEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeC---CCHH
Q 022717 79 ACAVTYFGDGGTSEGDFHAALNFSAVTEAP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG---NDAL 153 (293)
Q Consensus 79 ~~vv~~~GDGa~~~G~~~Eal~~A~~~~lp--vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG---~D~~ 153 (293)
+++|.+.|-|+..+ +|--+...+++ |+.|+.|+. . ...++|+.+|+|++.++- .+-+
T Consensus 14 ri~vl~SG~gsnl~-----all~~~~~~~~~eI~~Vis~~~-a------------~~~~~A~~~gIp~~~~~~~~~~~r~ 75 (215)
T 3da8_A 14 RLVVLASGTGSLLR-----SLLDAAVGDYPARVVAVGVDRE-C------------RAAEIAAEASVPVFTVRLADHPSRD 75 (215)
T ss_dssp EEEEEESSCCHHHH-----HHHHHSSTTCSEEEEEEEESSC-C------------HHHHHHHHTTCCEEECCGGGSSSHH
T ss_pred EEEEEEeCChHHHH-----HHHHHHhccCCCeEEEEEeCCc-h------------HHHHHHHHcCCCEEEeCcccccchh
Confidence 45666668877653 33333322454 777777653 1 135789999999999852 1233
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEee
Q 022717 154 AIYSAVHAAREMAIGEGRPILIEALTY 180 (293)
Q Consensus 154 ~v~~a~~~a~~~~r~~~gP~lIe~~t~ 180 (293)
+..+.+.+.++ + -+|=+|.+.-|
T Consensus 76 ~~d~~~~~~l~---~-~~~Dlivlagy 98 (215)
T 3da8_A 76 AWDVAITAATA---A-HEPDLVVSAGF 98 (215)
T ss_dssp HHHHHHHHHHH---T-TCCSEEEEEEC
T ss_pred hhhHHHHHHHH---h-hCCCEEEEcCc
Confidence 33444444443 3 34545545444
No 113
>1abz_A Alpha-T-alpha, ATA; de novo design, helix-turn-helix, peptide; HET: SIN; NMR {} SCOP: k.15.1.1
Probab=37.42 E-value=28 Score=20.58 Aligned_cols=26 Identities=12% Similarity=0.150 Sum_probs=22.7
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHH
Q 022717 215 KWIESNGWWNGDIESELRSSVRKQIL 240 (293)
Q Consensus 215 ~~L~~~g~~~~~~~~~i~~~~~~~v~ 240 (293)
+.|.++|.-+..|+.+|+++.+++|.
T Consensus 13 qaleargtdsnaelrameaklkaeiq 38 (40)
T 1abz_A 13 QALEARGTDSNAELRAMEAKLKAEIQ 38 (40)
T ss_dssp HHHHHTCSSCSSHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCchHHHHHHHHHHHHHHh
Confidence 55788999999999999999998875
No 114
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=35.64 E-value=32 Score=27.60 Aligned_cols=33 Identities=9% Similarity=0.127 Sum_probs=27.5
Q ss_pred CceEEEEeCcccccchHHHHHHHHHhhcCCCEE
Q 022717 78 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVI 110 (293)
Q Consensus 78 ~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi 110 (293)
-++.++++|-|....+...|...+|...++||+
T Consensus 34 AkrPvil~G~g~~~~~a~~~l~~lae~~~iPV~ 66 (170)
T 3cf4_G 34 AKRPLLMVGTLALDPELLDRVVKISKAANIPIA 66 (170)
T ss_dssp CSSEEEEECSTTCCHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCEEEECCCccchhHHHHHHHHHHHhCCCEE
Confidence 356888999998877777788889999999975
No 115
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=34.77 E-value=48 Score=26.33 Aligned_cols=80 Identities=10% Similarity=0.038 Sum_probs=40.9
Q ss_pred CceEEEEeCcccccchH--HHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCc-eEEEEeCCCHHH
Q 022717 78 DACAVTYFGDGGTSEGD--FHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV-RSIRVDGNDALA 154 (293)
Q Consensus 78 ~~~vv~~~GDGa~~~G~--~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~-~~~~VdG~D~~~ 154 (293)
...+++++.||..+.+. ..+++..+...++++..|-.-+... .......+..+|..-|- ..+.++ |..+
T Consensus 110 ~~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~~~------~~~~~~~L~~iA~~~~g~~~~~~~--~~~~ 181 (198)
T 1n3y_A 110 AAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQ------NRNSWKELNDIASKPSQEHIFKVE--DFDA 181 (198)
T ss_dssp SEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGGG------SSTTHHHHHHHSCSSSGGGEEEES--SGGG
T ss_pred CceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEcccccc------ccccHHHHHHHHcCCCcccEEEeC--CHHH
Confidence 46788999999876332 3556666666677655443321110 00011233445554333 346665 4555
Q ss_pred HHHHHHHHHHH
Q 022717 155 IYSAVHAAREM 165 (293)
Q Consensus 155 v~~a~~~a~~~ 165 (293)
+..++++..+.
T Consensus 182 l~~~~~~i~~~ 192 (198)
T 1n3y_A 182 LKDIQNQLKEK 192 (198)
T ss_dssp GGGGHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 55555544443
No 116
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=34.16 E-value=1.4e+02 Score=24.93 Aligned_cols=81 Identities=15% Similarity=0.101 Sum_probs=45.8
Q ss_pred ceEEEEeCcccccchHHHHHHHHHhhc-CCC--EEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeCC---CH
Q 022717 79 ACAVTYFGDGGTSEGDFHAALNFSAVT-EAP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN---DA 152 (293)
Q Consensus 79 ~~vv~~~GDGa~~~G~~~Eal~~A~~~-~lp--vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~---D~ 152 (293)
+++|.+.|-|+.. ++|--+... .+| |+.|+.|+.- ....++|+.+|+|++.++-. +-
T Consensus 4 riavl~Sg~Gsnl-----~ali~~~~~~~l~~eI~~Visn~~~------------a~v~~~A~~~gIp~~~~~~~~~~~r 66 (211)
T 3p9x_A 4 RVAIFASGSGTNA-----EAIIQSQKAGQLPCEVALLITDKPG------------AKVVERVKVHEIPVCALDPKTYPSK 66 (211)
T ss_dssp EEEEECCTTCHHH-----HHHHHHHHTTCCSSEEEEEEESCSS------------SHHHHHHHTTTCCEEECCGGGSSSH
T ss_pred EEEEEEeCCchHH-----HHHHHHHHcCCCCcEEEEEEECCCC------------cHHHHHHHHcCCCEEEeChhhcCch
Confidence 4667777766543 445444433 354 7777776531 23567899999999887532 33
Q ss_pred HHHHHHHHHHHHHhhccCCcEEEEEEee
Q 022717 153 LAIYSAVHAAREMAIGEGRPILIEALTY 180 (293)
Q Consensus 153 ~~v~~a~~~a~~~~r~~~gP~lIe~~t~ 180 (293)
++..+.+.+.++ + -+|=+|.+.-|
T Consensus 67 ~~~d~~~~~~l~---~-~~~Dliv~agy 90 (211)
T 3p9x_A 67 EAYEIEVVQQLK---E-KQIDFVVLAGY 90 (211)
T ss_dssp HHHHHHHHHHHH---H-TTCCEEEESSC
T ss_pred hhhHHHHHHHHH---h-cCCCEEEEeCc
Confidence 333344444443 2 34555555444
No 117
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=33.70 E-value=52 Score=27.74 Aligned_cols=89 Identities=18% Similarity=0.178 Sum_probs=56.6
Q ss_pred cccCccHHHHHHHHHhhhcC----------CCceEEEEeCcccc--cchHHHHHHHHHhhcCC-CEEEEEEeCCcccccc
Q 022717 57 TIATQLPHAVGAAYALKMDR----------KDACAVTYFGDGGT--SEGDFHAALNFSAVTEA-PVIFICRNNGWAISTP 123 (293)
Q Consensus 57 ~lG~~lp~A~G~A~a~k~~~----------~~~~vv~~~GDGa~--~~G~~~Eal~~A~~~~l-pvi~vi~NN~~~~~~~ 123 (293)
-+..|++.+=-+.-.+.+.. |..+.-...-+|+. ..|....++.+|..-+| |.-+||+==. ...
T Consensus 95 g~tTGISA~DRa~Ti~~ladp~~~p~Df~rPGHvfPL~A~~gGvl~R~GhTEaavdLarlAGl~Pa~vicEiv~---~~~ 171 (206)
T 3mio_A 95 GIGTGISASDRATTMRLLADPTSVADDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPAGAICEIVS---QKD 171 (206)
T ss_dssp SCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEECCTTGGGTCCCHHHHHHHHHHHTTSCSBEEEEEBBC---SSS
T ss_pred CCCCCcCHHHHHHHHHHHhCCCCCHHHhCCCCCceeEeeCCCCcccCCChHHHHHHHHHHcCCCceEEEEEEee---eCC
Confidence 34566666555433333322 34445555667766 46888889999999998 8777776200 111
Q ss_pred ccCccCcccHHHHHhhcCceEEEEe
Q 022717 124 ISDQFRSDGAVVKGRAYGVRSIRVD 148 (293)
Q Consensus 124 ~~~~~~~~d~~~~a~a~G~~~~~Vd 148 (293)
.....+.+++.++|+.+|++.+.+.
T Consensus 172 dG~mar~~~l~~fA~~h~l~~iti~ 196 (206)
T 3mio_A 172 EGSMAHTDELRVFADEHGLALITIA 196 (206)
T ss_dssp TTSBCCHHHHHHHHHHHTCEEEEHH
T ss_pred CCCcCCHHHHHHHHHHcCCcEEEHH
Confidence 1223345788999999999999875
No 118
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=33.68 E-value=49 Score=25.21 Aligned_cols=44 Identities=16% Similarity=0.283 Sum_probs=35.8
Q ss_pred HHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhc--cCCcEEEEEEe
Q 022717 136 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIG--EGRPILIEALT 179 (293)
Q Consensus 136 ~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~--~~gP~lIe~~t 179 (293)
++..|++.++.+...|+.++.+.+++-++.+-. .+.|++|++..
T Consensus 11 KG~~~~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~ 56 (120)
T 3ghf_A 11 KGSSFTLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSG 56 (120)
T ss_dssp CCCCCCCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEE
T ss_pred EcCeeeEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccc
Confidence 356688999999889999999999888876654 36799999864
No 119
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=32.69 E-value=75 Score=25.89 Aligned_cols=69 Identities=9% Similarity=-0.020 Sum_probs=41.2
Q ss_pred EEEEEEeCCccccccccC-ccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 109 VIFICRNNGWAISTPISD-QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 109 vi~vi~NN~~~~~~~~~~-~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
+.+||.|..|.-..+... ......+.+..+.+|+.+.....-+..++.+++++..++....+..+++-+
T Consensus 45 ~ALIInn~~f~~~~~R~G~~~Da~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~f~~~~d~~~~d~~v~~ 114 (178)
T 2h54_A 45 LALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVKKNLTASDMTTELEAFAHRPEHKTSDSTFLV 114 (178)
T ss_dssp EEEEEECCCCSSSCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHTCGGGGGCSCEEEE
T ss_pred EEEEEehhhcCCCccCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhhhhcCCCCEEEEE
Confidence 677777777742111100 011235677788899999887777888888888876532111233455544
No 120
>3hyn_A Putative signal transduction protein; DUF1863 family protein, nucleotide-binding protein, structur genomics; HET: MSE; 1.20A {Eubacterium rectale atcc 33656}
Probab=32.49 E-value=55 Score=27.20 Aligned_cols=37 Identities=16% Similarity=0.253 Sum_probs=29.8
Q ss_pred CceEEEEeCcccc-cchHHHHHHHHHh-hcCCCEEEEEEe
Q 022717 78 DACAVTYFGDGGT-SEGDFHAALNFSA-VTEAPVIFICRN 115 (293)
Q Consensus 78 ~~~vv~~~GDGa~-~~G~~~Eal~~A~-~~~lpvi~vi~N 115 (293)
...+|+++|+-+- ..+..| ++..|. ..++|||.|-.+
T Consensus 80 Sk~vIllIs~~T~~s~~v~w-EIe~Ai~~~~~PII~Vy~~ 118 (189)
T 3hyn_A 80 SKNIILFLSSITANSRALRE-EMNYGIGTKGLPVIVIYPD 118 (189)
T ss_dssp EEEEEEECCTTCCCCHHHHH-HHHHHTTTTCCCEEEEETT
T ss_pred cCcEEEEEecCccccchhHH-HHHHHHHhcCCcEEEEECC
Confidence 4578899999887 455666 599999 999999988765
No 121
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=30.95 E-value=1.6e+02 Score=25.72 Aligned_cols=53 Identities=6% Similarity=-0.034 Sum_probs=34.5
Q ss_pred CCceEEEEeCcccccchHHHHHHHHHhhc-CCC--EEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEe
Q 022717 77 KDACAVTYFGDGGTSEGDFHAALNFSAVT-EAP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVD 148 (293)
Q Consensus 77 ~~~~vv~~~GDGa~~~G~~~Eal~~A~~~-~lp--vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~Vd 148 (293)
+.+++|.+.|.|+.. ++|-.+... .+| |+.|+.|+. +...+|+.+|+|++.++
T Consensus 90 ~~ri~vl~Sg~g~~l-----~~ll~~~~~g~l~~~i~~Visn~~--------------~~~~~A~~~gIp~~~~~ 145 (286)
T 3n0v_A 90 RPKVVIMVSKADHCL-----NDLLYRQRIGQLGMDVVAVVSNHP--------------DLEPLAHWHKIPYYHFA 145 (286)
T ss_dssp CCEEEEEESSCCHHH-----HHHHHHHHTTSSCCEEEEEEESSS--------------TTHHHHHHTTCCEEECC
T ss_pred CcEEEEEEeCCCCCH-----HHHHHHHHCCCCCcEEEEEEeCcH--------------HHHHHHHHcCCCEEEeC
Confidence 446777778887543 345444443 355 777777653 23457899999999875
No 122
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=30.67 E-value=1.9e+02 Score=25.49 Aligned_cols=53 Identities=13% Similarity=-0.017 Sum_probs=34.2
Q ss_pred CCceEEEEeCcccccchHHHHHHHHHhhc-CCC--EEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEe
Q 022717 77 KDACAVTYFGDGGTSEGDFHAALNFSAVT-EAP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVD 148 (293)
Q Consensus 77 ~~~~vv~~~GDGa~~~G~~~Eal~~A~~~-~lp--vi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~Vd 148 (293)
+.+++|.+.|.|+.. ++|-.+... .+| +..||.|+. +...+|+.+|+|++.++
T Consensus 95 ~~ri~vl~Sg~g~~l-----~~ll~~~~~g~l~~~i~~Visn~~--------------~~~~~A~~~gIp~~~~~ 150 (292)
T 3lou_A 95 RPKVLIMVSKLEHCL-----ADLLFRWKMGELKMDIVGIVSNHP--------------DFAPLAAQHGLPFRHFP 150 (292)
T ss_dssp CCEEEEEECSCCHHH-----HHHHHHHHHTSSCCEEEEEEESSS--------------TTHHHHHHTTCCEEECC
T ss_pred CCEEEEEEcCCCcCH-----HHHHHHHHcCCCCcEEEEEEeCcH--------------HHHHHHHHcCCCEEEeC
Confidence 456777778877543 344444333 355 777777653 23457999999999875
No 123
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=30.32 E-value=71 Score=26.89 Aligned_cols=67 Identities=19% Similarity=0.254 Sum_probs=47.2
Q ss_pred CCceEEEEeCcccc--cchHHHHHHHHHhhcCC-CEEEEEEeCCcccc-ccccCccCcccHHHHHhhcCceEEEEe
Q 022717 77 KDACAVTYFGDGGT--SEGDFHAALNFSAVTEA-PVIFICRNNGWAIS-TPISDQFRSDGAVVKGRAYGVRSIRVD 148 (293)
Q Consensus 77 ~~~~vv~~~GDGa~--~~G~~~Eal~~A~~~~l-pvi~vi~NN~~~~~-~~~~~~~~~~d~~~~a~a~G~~~~~Vd 148 (293)
|+.+.-...=+|+. ..|....++.+|..-+| |.-+||+ +. .......+.+++.++|+.+|++.+.+.
T Consensus 126 PGHvfPL~A~~gGvl~R~GHTEAavdLarLAGl~Pa~vicE-----i~~~~dG~mar~~~l~~fA~~h~l~iiti~ 196 (204)
T 1tks_A 126 PGHILPLRAVPGLLKKRRGHTEAAVQLSTLAGLQPAGVICE-----LVRDEDGLMMRLDDCIQFGKKHGIKIININ 196 (204)
T ss_dssp EEEEEEEEECTTGGGTCCCHHHHHHHHHHHTTSCSBEEEEE-----BBCTTTCCBCBHHHHHHHHHHHTCCEEEHH
T ss_pred CCCcceeeecCCCCccCCCcHHHHHHHHHHcCCCceEEEEE-----EeECCCCCcCCHHHHHHHHHHcCCcEEEHH
Confidence 34445566667765 57888888999999998 8777765 22 111223445788999999999999865
No 124
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=29.79 E-value=71 Score=26.08 Aligned_cols=32 Identities=6% Similarity=-0.146 Sum_probs=17.1
Q ss_pred EEEEeCcccccchHHHHHHHHHhhcCCCEEEE
Q 022717 81 AVTYFGDGGTSEGDFHAALNFSAVTEAPVIFI 112 (293)
Q Consensus 81 vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~v 112 (293)
++++.||+....+...++...+...+..+.+|
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~I 141 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDII 141 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEE
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEE
Confidence 44555655444555555555555555554443
No 125
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=29.60 E-value=56 Score=31.48 Aligned_cols=43 Identities=16% Similarity=0.169 Sum_probs=30.2
Q ss_pred CceEEEEeCcccccchH--------HHHHHHHHhhcCCCEEEEEEeCCccc
Q 022717 78 DACAVTYFGDGGTSEGD--------FHAALNFSAVTEAPVIFICRNNGWAI 120 (293)
Q Consensus 78 ~~~vv~~~GDGa~~~G~--------~~Eal~~A~~~~lpvi~vi~NN~~~~ 120 (293)
++.|+++.-|.++.-|. +.-++.+|...++|+|.++++.+--+
T Consensus 94 Gr~v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~~lP~I~l~~SGGARm 144 (523)
T 1on3_A 94 GRPVHAASQDFTVMGGSAGETQSTKVVETMEQALLTGTPFLFFYDSGGARI 144 (523)
T ss_dssp TEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCG
T ss_pred CEEEEEEEEcCCccCCcCcHHHHHHHHHHHHHHHHcCCCEEEEEcCCCCCh
Confidence 46777777887775554 34466777788888888888766543
No 126
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=29.57 E-value=2.1e+02 Score=23.67 Aligned_cols=81 Identities=16% Similarity=0.126 Sum_probs=45.6
Q ss_pred ceEEEEeCcccccchHHHHHHHHHhhc-CC--CEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeC---CCH
Q 022717 79 ACAVTYFGDGGTSEGDFHAALNFSAVT-EA--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG---NDA 152 (293)
Q Consensus 79 ~~vv~~~GDGa~~~G~~~Eal~~A~~~-~l--pvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG---~D~ 152 (293)
+++|.+.|.|+..+ +|--+... .+ .|+.||.|+.- ..-.++|+.+|+|++.++- .+-
T Consensus 2 riaVl~SG~Gs~L~-----aLi~~~~~~~~~~~I~~Vvs~~~~------------~~~~~~A~~~gIp~~~~~~~~~~~r 64 (209)
T 1meo_A 2 RVAVLISGTGSNLQ-----ALIDSTREPNSSAQIDIVISNKAA------------VAGLDKAERAGIPTRVINHKLYKNR 64 (209)
T ss_dssp EEEEEESSSCTTHH-----HHHHHHHSTTCSCEEEEEEESSTT------------CHHHHHHHHTTCCEEECCGGGSSSH
T ss_pred eEEEEEECCchHHH-----HHHHHHhcCCCCcEEEEEEeCCCC------------hHHHHHHHHcCCCEEEECccccCch
Confidence 47888889998753 23322222 23 47777776531 1124789999999998753 233
Q ss_pred HHHHHHHHHHHHHhhccCCcEEEEEEee
Q 022717 153 LAIYSAVHAAREMAIGEGRPILIEALTY 180 (293)
Q Consensus 153 ~~v~~a~~~a~~~~r~~~gP~lIe~~t~ 180 (293)
++..+.+.+.++ + -+|=+|.+.-|
T Consensus 65 ~~~~~~~~~~l~---~-~~~Dliv~a~y 88 (209)
T 1meo_A 65 VEFDSAIDLVLE---E-FSIDIVCLAGF 88 (209)
T ss_dssp HHHHHHHHHHHH---H-TTCCEEEEESC
T ss_pred hhhhHHHHHHHH---h-cCCCEEEEcch
Confidence 333334434443 2 34656555554
No 127
>2xf7_A GP23.1; viral protein; 1.61A {Bacillus phage SPP1} PDB: 2xf5_A 2xf6_A
Probab=28.81 E-value=56 Score=20.63 Aligned_cols=31 Identities=6% Similarity=0.118 Sum_probs=22.2
Q ss_pred HHHHhCCCcHHHHHHHHHHCCCCCHHHHHHHH
Q 022717 201 EWWRTTQDPVTRFRKWIESNGWWNGDIESELR 232 (293)
Q Consensus 201 ~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~ 232 (293)
+.|+. ...+...-+..+++|-+|++|.++|.
T Consensus 12 D~W~~-GT~~~~~mR~AV~~G~iTQ~E~D~I~ 42 (51)
T 2xf7_A 12 DSWLD-GTASEELLRVAVNAGDLTQEEADKIM 42 (51)
T ss_dssp HHHHH-TCCCHHHHHHHHHHTSSCHHHHHHHH
T ss_pred HHHhc-chhhHHHHHHHHhcCcccHHHHHHHH
Confidence 45763 45555555667888999999988875
No 128
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=28.71 E-value=49 Score=31.89 Aligned_cols=41 Identities=22% Similarity=0.209 Sum_probs=25.8
Q ss_pred CceEEEEeCcccccchH--------HHHHHHHHhhcCCCEEEEEEeCCc
Q 022717 78 DACAVTYFGDGGTSEGD--------FHAALNFSAVTEAPVIFICRNNGW 118 (293)
Q Consensus 78 ~~~vv~~~GDGa~~~G~--------~~Eal~~A~~~~lpvi~vi~NN~~ 118 (293)
++.|+++.-|.++.-|. +.-++.+|...++|+|.++++.+-
T Consensus 90 Gr~v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~~~P~I~l~~SGGa 138 (522)
T 1x0u_A 90 GRTVFAYAQDFTVLGGSLGETHANKIVRAYELALKVGAPVVGINDSGGA 138 (522)
T ss_dssp TEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCSB
T ss_pred CEEEEEEEecCceeCccccHHHHHHHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 45667777776665444 334566677777777777765554
No 129
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=28.24 E-value=1.3e+02 Score=25.90 Aligned_cols=31 Identities=19% Similarity=0.238 Sum_probs=20.6
Q ss_pred ceEEEEeCcccccchHHHHHHHHHh-hcCCCEE
Q 022717 79 ACAVTYFGDGGTSEGDFHAALNFSA-VTEAPVI 110 (293)
Q Consensus 79 ~~vv~~~GDGa~~~G~~~Eal~~A~-~~~lpvi 110 (293)
...+.+.-|--+-+|.+.- |..+. .-++||+
T Consensus 74 A~~IsVlTd~~~F~gs~~d-L~~ir~~v~lPvL 105 (251)
T 1i4n_A 74 ADAISILTEKHYFKGDPAF-VRAARNLTCRPIL 105 (251)
T ss_dssp CSEEEEECCCSSSCCCTHH-HHHHHTTCCSCEE
T ss_pred CCceEEEecccccCCCHHH-HHHHHHhCCCCEE
Confidence 5688888888876665543 54443 3478977
No 130
>1ugp_B NitrIle hydratase beta subunit; complex, N-butyric acid, non-corrin cobalt, hydration, lyase; HET: BUA; 1.63A {Pseudonocardia thermophila} SCOP: b.34.4.4 PDB: 1ire_B 1ugq_B 1ugr_B 1ugs_B
Probab=27.80 E-value=66 Score=27.49 Aligned_cols=31 Identities=10% Similarity=-0.014 Sum_probs=24.9
Q ss_pred HHHHHhCCCcHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q 022717 200 IEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVR 236 (293)
Q Consensus 200 ~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~ 236 (293)
++.|- ..+.+.|+++|++|++|+++..++..
T Consensus 69 Ye~Wl------~ale~lLvekGvit~~EL~ar~~~~~ 99 (226)
T 1ugp_B 69 YWHWI------RTYIHHGVRTGKIDLEELERRTQYYR 99 (226)
T ss_dssp HHHHH------HHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred HHHHH------HHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 66775 56899999999999999987755543
No 131
>1ugp_A NitrIle hydratase alpha subunit; complex, N-butyric acid, non-corrin cobalt, hydration, lyase; HET: BUA; 1.63A {Pseudonocardia thermophila} SCOP: d.149.1.1 PDB: 1ire_A 1ugr_A 1ugq_A 1ugs_A
Probab=27.77 E-value=52 Score=27.49 Aligned_cols=27 Identities=4% Similarity=0.094 Sum_probs=22.6
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHH
Q 022717 211 TRFRKWIESNGWWNGDIESELRSSVRK 237 (293)
Q Consensus 211 ~~~~~~L~~~g~~~~~~~~~i~~~~~~ 237 (293)
..++..|+++|+++.++++.+.+.+..
T Consensus 21 ~AL~~lL~eKGli~~~~id~~~~~~e~ 47 (203)
T 1ugp_A 21 KALESMLIEQGILTTSMIDRMAEIYEN 47 (203)
T ss_dssp HHHHHHHHHTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHhc
Confidence 478999999999999999998765443
No 132
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=27.67 E-value=1.9e+02 Score=22.25 Aligned_cols=32 Identities=9% Similarity=0.096 Sum_probs=21.8
Q ss_pred cHHHHHhhcCceEEEEe---CCCHHHHHHHHHHHH
Q 022717 132 GAVVKGRAYGVRSIRVD---GNDALAIYSAVHAAR 163 (293)
Q Consensus 132 d~~~~a~a~G~~~~~Vd---G~D~~~v~~a~~~a~ 163 (293)
....+++.+|++.+.+. |.++.++...+.+.+
T Consensus 143 ~~~~~~~~~~~~~~~~Sa~~g~gv~~l~~~l~~~i 177 (196)
T 3tkl_A 143 TAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 177 (196)
T ss_dssp HHHHHHHHTTCCEEEECTTTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEEeCCCCCCHHHHHHHHHHHH
Confidence 44567888899999885 556666655555444
No 133
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=26.93 E-value=1.8e+02 Score=25.00 Aligned_cols=44 Identities=7% Similarity=-0.064 Sum_probs=33.7
Q ss_pred HHHHHhhcCceEEE----Ee--CCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 133 AVVKGRAYGVRSIR----VD--GNDALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 133 ~~~~a~a~G~~~~~----Vd--G~D~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
..+.|+.+|++..+ +| ..|..++.+.++++...+|+.+ -++...
T Consensus 142 a~~~A~~~gvp~~~rdvFLD~~~~~~~~I~~ql~~a~~~A~~~G-~aIaIG 191 (245)
T 2nly_A 142 IPQLAEELEVPYATRSIFLDNTHSSRKEVIKNMRKLAKKAKQGS-EPIGIG 191 (245)
T ss_dssp HHHHHHHTTCCEEECCEESCCTTCCHHHHHHHHHHHHHHHHTTS-CCEEEE
T ss_pred HHHHHHHcCCCeEEeeEECCCCCCCHHHHHHHHHHHHHHHhhcC-cEEEEE
Confidence 45778999999876 34 4788999999999999998755 444333
No 134
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=26.64 E-value=2e+02 Score=22.11 Aligned_cols=53 Identities=11% Similarity=0.229 Sum_probs=30.1
Q ss_pred CCCEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEe---CCCHHHHHHHHHHHH
Q 022717 106 EAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVD---GNDALAIYSAVHAAR 163 (293)
Q Consensus 106 ~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~Vd---G~D~~~v~~a~~~a~ 163 (293)
+.|+++|++--... . .........++++.+|++.+.+. |.++.++...+.+.+
T Consensus 126 ~~p~ilv~nK~Dl~--~---~~~~~~~~~~~~~~~~~~~~~~Sa~~~~gi~~l~~~l~~~~ 181 (190)
T 3con_A 126 DVPMVLVGNKCDLP--T---RTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREI 181 (190)
T ss_dssp CCCEEEEEECTTCS--C---CCSCHHHHHHHHHHHTCCEEECCTTTCTTHHHHHHHHHHHH
T ss_pred CCeEEEEEECCcCC--c---ccCCHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHHH
Confidence 67877766532211 1 11122345667788899988875 556666655555444
No 135
>2e62_A Protein AT5G25060; CWF21 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Arabidopsis thaliana}
Probab=26.61 E-value=1.2e+02 Score=20.41 Aligned_cols=32 Identities=19% Similarity=0.191 Sum_probs=25.6
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q 022717 210 VTRFRKWIESNGWWNGDIESELRSSVRKQILH 241 (293)
Q Consensus 210 i~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~ 241 (293)
+..|+..|.++|..+.++++.--+..++.+..
T Consensus 25 ~me~rD~LEeqG~~~~~eI~~kV~~~RkkL~~ 56 (61)
T 2e62_A 25 LIEYRETLEEQGMKNPEEIERKVEINRKRLEV 56 (61)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH
Confidence 45599999999999988888777777777654
No 136
>3qyh_A CO-type nitrIle hydratase alpha subunit; cobalt, cysteine sulfinic acid, lyase; 2.00A {Pseudomonas putida} PDB: 3qyg_A 3qxe_A 3qz9_A 3qz5_A
Probab=26.57 E-value=46 Score=28.31 Aligned_cols=25 Identities=4% Similarity=0.020 Sum_probs=21.6
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHH
Q 022717 211 TRFRKWIESNGWWNGDIESELRSSV 235 (293)
Q Consensus 211 ~~~~~~L~~~g~~~~~~~~~i~~~~ 235 (293)
..++..|+++|++|.++++.+.+.+
T Consensus 41 ~Al~~lL~eKG~i~~~~~~~~~~~~ 65 (226)
T 3qyh_A 41 KALESLLIEKGLVDPAAMDLVVQTY 65 (226)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 5688999999999999999987643
No 137
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=26.48 E-value=1.5e+02 Score=23.35 Aligned_cols=19 Identities=11% Similarity=-0.024 Sum_probs=12.4
Q ss_pred cHHHHHhhcCceEEEEeCC
Q 022717 132 GAVVKGRAYGVRSIRVDGN 150 (293)
Q Consensus 132 d~~~~a~a~G~~~~~VdG~ 150 (293)
+..+.++..|++++-+-++
T Consensus 97 ~~~~~ak~~g~~vi~IT~~ 115 (186)
T 1m3s_A 97 HTAAKAKSLHGIVAALTIN 115 (186)
T ss_dssp HHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHCCCEEEEEECC
Confidence 3456677777777776543
No 138
>2zzd_C Thiocyanate hydrolase subunit gamma; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dxc_C* 2dxb_C 2dd5_C* 2dd4_C*
Probab=26.41 E-value=74 Score=27.27 Aligned_cols=24 Identities=8% Similarity=0.145 Sum_probs=21.4
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHH
Q 022717 211 TRFRKWIESNGWWNGDIESELRSS 234 (293)
Q Consensus 211 ~~~~~~L~~~g~~~~~~~~~i~~~ 234 (293)
..++..|+++|+++.++++.+.+.
T Consensus 32 ~AL~~lL~eKGli~~~~~~~~~~~ 55 (243)
T 2zzd_C 32 MAVRELAIEKGLFSAEDHRVWKDY 55 (243)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHH
Confidence 468999999999999999998775
No 139
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=26.33 E-value=2e+02 Score=23.21 Aligned_cols=59 Identities=19% Similarity=0.195 Sum_probs=36.1
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcccccccccCCCCccHHHHHHHHHHHHH
Q 022717 210 VTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIK 281 (293)
Q Consensus 210 i~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~p~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 281 (293)
+..++++|..+|.-++++++.--+.++.++..+ . ...|++|--. ..+.+..++|.+++.
T Consensus 125 ~e~L~~RL~~Rg~e~~e~i~~Rl~~a~~e~~~~----~-------~~~fD~vIvN--ddle~a~~~l~~iI~ 183 (186)
T 1ex7_A 125 VEDLKKRLEGRGTETEESINKRLSAAQAELAYA----E-------TGAHDKVIVN--DDLDKAYKELKDFIF 183 (186)
T ss_dssp HHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH----T-------TTCSSEEEEC--SSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhc----c-------ccCCcEEEEC--cCHHHHHHHHHHHHH
Confidence 466889999999888877665544444444322 1 1235554432 346777777777764
No 140
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=26.30 E-value=1.6e+02 Score=22.00 Aligned_cols=54 Identities=9% Similarity=0.177 Sum_probs=30.7
Q ss_pred CCCEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEe---CCCHHHHHHHHHHHH
Q 022717 106 EAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVD---GNDALAIYSAVHAAR 163 (293)
Q Consensus 106 ~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~Vd---G~D~~~v~~a~~~a~ 163 (293)
+.|+++|.+--.. ............++++.+|++.+.+. |.++.++...+.+.+
T Consensus 109 ~~p~ilv~nK~Dl----~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~v~~l~~~l~~~i 165 (169)
T 3q85_A 109 DLPVILVGNKSDL----ARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFEGAVRQI 165 (169)
T ss_dssp CCCEEEEEECTTC----GGGCCSCHHHHHHHHHHTTCEEEECBTTTTBSHHHHHHHHHHHH
T ss_pred CCCEEEEeeCcch----hhcccCCHHHHHHHHHHcCCcEEEecCccCCCHHHHHHHHHHHH
Confidence 6788777653222 11122222345567888999998875 455665555554443
No 141
>2o3a_A UPF0106 protein AF_0751; structural genomics, unknown function, PSI-2, protein structure initiative; 2.20A {Archaeoglobus fulgidus} SCOP: c.116.1.8
Probab=25.90 E-value=88 Score=25.56 Aligned_cols=41 Identities=24% Similarity=0.468 Sum_probs=31.7
Q ss_pred cHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 022717 132 GAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 176 (293)
Q Consensus 132 d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe 176 (293)
...--|+|||...+...+.|. .+.+.++...++ -+||..||
T Consensus 23 HV~LtARAfGA~~iil~~~D~-~v~esv~dV~~r---wGG~F~ve 63 (178)
T 2o3a_A 23 HVALTARAFGAKGIYFDTEDK-SVFESVRDVVER---WGGDFFIK 63 (178)
T ss_dssp HHHHHHHHTTCSEEEESSCCH-HHHHHHHHHHHH---HCSCCEEE
T ss_pred HHHHHHHHhCCCeeEEeCCCH-HHHHHHHHHHHh---cCCceEEE
Confidence 445669999999999999875 566777776664 68887777
No 142
>3ljc_A ATP-dependent protease LA; LON N-domain, allosteric enzyme, ATP-binding, DNA-binding, H nucleotide-binding, serine protease, stress respo; 2.60A {Escherichia coli}
Probab=25.90 E-value=1.6e+02 Score=24.95 Aligned_cols=67 Identities=9% Similarity=0.128 Sum_probs=46.1
Q ss_pred hHHHHHHHhCCCcHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcccccccccCCCCccHHHHHHHH
Q 022717 197 VDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSL 276 (293)
Q Consensus 197 ~~e~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~p~~~~~~~~v~~~~~~~~~~~~~~~ 276 (293)
.++-...-...|+..|++.-+.- +-.+-++.+++++++++|.+-+++.... -.|+||++++
T Consensus 184 ~~eKQ~LLe~~d~~~Rl~~l~~l--L~~e~e~~~l~~~I~~~v~~~~~k~Qre-----------------y~LrEQlk~I 244 (252)
T 3ljc_A 184 LADKQSVLEMSDVNERLEYLMAM--MESEIDLLQVEKRIRNRVKKQMEKSQRE-----------------YYLNEQMKAI 244 (252)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHH
Confidence 34444444467888887765432 2246678888899998888877766542 2478999998
Q ss_pred HHHHHh
Q 022717 277 RETIKK 282 (293)
Q Consensus 277 ~~~~~~ 282 (293)
++.|..
T Consensus 245 qkELGe 250 (252)
T 3ljc_A 245 QKELGE 250 (252)
T ss_dssp HHHHHS
T ss_pred HHHhCC
Confidence 888864
No 143
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens}
Probab=25.83 E-value=2.4e+02 Score=22.02 Aligned_cols=58 Identities=7% Similarity=0.107 Sum_probs=34.0
Q ss_pred CCCEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhh
Q 022717 106 EAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAI 167 (293)
Q Consensus 106 ~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r 167 (293)
+.|+++|++--.. . ............+++.+|++.+.+...+-..+.+.+....+.+.
T Consensus 129 ~~piilv~nK~Dl--~--~~~~v~~~~~~~~~~~~~~~~~~~Sa~~~~~v~~l~~~l~~~i~ 186 (201)
T 3oes_A 129 RVPVVLVGNKADL--S--PEREVQAVEGKKLAESWGATFMESSARENQLTQGIFTKVIQEIA 186 (201)
T ss_dssp CCCEEEEEECTTC--G--GGCCSCHHHHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECccC--c--cccccCHHHHHHHHHHhCCeEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 5687766653222 1 11122223445678889999999877666666666665555443
No 144
>2p1h_A APAF-1, apoptotic protease-activating factor 1; folding, unfolding, apoptosis; 1.59A {Homo sapiens} SCOP: a.77.1.3 PDB: 1cww_A 1c15_A 1cy5_A 3ygs_C 2ygs_A
Probab=25.52 E-value=44 Score=23.86 Aligned_cols=25 Identities=16% Similarity=0.252 Sum_probs=22.0
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHH
Q 022717 210 VTRFRKWIESNGWWNGDIESELRSS 234 (293)
Q Consensus 210 i~~~~~~L~~~g~~~~~~~~~i~~~ 234 (293)
+..+-.+|.++|++|+++.+.|+++
T Consensus 24 v~~lld~L~~~~vlt~~~~e~I~~~ 48 (94)
T 2p1h_A 24 TSYIMDHMISDGFLTISEEEKVRNE 48 (94)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHTS
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHcC
Confidence 5667889999999999999999875
No 145
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=25.23 E-value=5.1e+02 Score=26.41 Aligned_cols=100 Identities=7% Similarity=-0.052 Sum_probs=56.1
Q ss_pred HHHHHHHHHhhhcCCCceEEEEeCcccccc--hHHHHH----HHHH-hh----cCC-CEEEEEEeCCcccc--ccccCcc
Q 022717 63 PHAVGAAYALKMDRKDACAVTYFGDGGTSE--GDFHAA----LNFS-AV----TEA-PVIFICRNNGWAIS--TPISDQF 128 (293)
Q Consensus 63 p~A~G~A~a~k~~~~~~~vv~~~GDGa~~~--G~~~Ea----l~~A-~~----~~l-pvi~vi~NN~~~~~--~~~~~~~ 128 (293)
+++.|+|+. ++..++.+. ++|.. ....+. +.++ +. +++ ++++|....+++.. +++.+
T Consensus 504 gia~Glal~------G~~~f~~t~-atFl~~~~~a~~q~akwiR~a~a~~~wr~~~~~v~~v~Th~si~~GeDGpTHQ-- 574 (845)
T 3ahc_A 504 GFLEAYLLT------GRHGIWSSY-ESFVHVIDSMLNQHAKWLEATVREIPWRKPISSVNLLVSSHVWRQDHNGFSHQ-- 574 (845)
T ss_dssp HHHHHHHHT------TCEEEEEEE-HHHHGGGHHHHHHHHHHHHHHHHHCTTSCCCBCEEEEEESCGGGCTTTCGGGC--
T ss_pred HHHHHHHhc------CCCCceecc-hhhhchhhhHHHHHHHHHHhhHHhhhhcccCCceEEEEeCCceeecCCCCCCC--
Confidence 345565543 233333332 45542 334444 5555 33 366 59999999888764 33322
Q ss_pred CcccHHHHHhhc---CceEEEE-eCCCHHHHHHHHHHHHHHhhccCCcEEE
Q 022717 129 RSDGAVVKGRAY---GVRSIRV-DGNDALAIYSAVHAAREMAIGEGRPILI 175 (293)
Q Consensus 129 ~~~d~~~~a~a~---G~~~~~V-dG~D~~~v~~a~~~a~~~~r~~~gP~lI 175 (293)
.+.+.+.+... .+|.++| ---|..++..+++.|++. .+.|.++
T Consensus 575 -~~e~~d~l~~~r~~~iPn~~V~~PaDanet~~a~~~al~~---~~~~~v~ 621 (845)
T 3ahc_A 575 -DPGVTSLLINKTFNNDHVTNIYFATDANMLLAISEKCFKS---TNKINAI 621 (845)
T ss_dssp -CCTHHHHHGGGCCTTCCCEEEEECCSHHHHHHHHHHHHHC---BSCEEEE
T ss_pred -CcHHHHHHHHhhccCCCCeEEEeCCCHHHHHHHHHHHHHc---CCCeEEE
Confidence 12355555554 4566664 445788888888888862 3444444
No 146
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=25.11 E-value=2.6e+02 Score=23.46 Aligned_cols=82 Identities=16% Similarity=0.150 Sum_probs=43.1
Q ss_pred ceEEEEeCcccccchHHHHHHHHHhhcCC--CEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeCC---CHH
Q 022717 79 ACAVTYFGDGGTSEGDFHAALNFSAVTEA--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN---DAL 153 (293)
Q Consensus 79 ~~vv~~~GDGa~~~G~~~Eal~~A~~~~l--pvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~---D~~ 153 (293)
+++|++.|-|++.+- . |......++ .|+.|+.|+. .....++|+.+|+|++.++-. +-+
T Consensus 24 rI~~l~SG~g~~~~~-~---l~~l~~~~~~~~I~~Vvt~~~------------~~~~~~~A~~~gIp~~~~~~~~~~~r~ 87 (229)
T 3auf_A 24 RIGVLISGSGTNLQA-I---LDGCREGRIPGRVAVVISDRA------------DAYGLERARRAGVDALHMDPAAYPSRT 87 (229)
T ss_dssp EEEEEESSCCHHHHH-H---HHHHHTTSSSEEEEEEEESST------------TCHHHHHHHHTTCEEEECCGGGSSSHH
T ss_pred EEEEEEeCCcHHHHH-H---HHHHHhCCCCCeEEEEEcCCC------------chHHHHHHHHcCCCEEEECcccccchh
Confidence 455555688877542 2 222222333 4667776532 112467899999999987632 223
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEee
Q 022717 154 AIYSAVHAAREMAIGEGRPILIEALTY 180 (293)
Q Consensus 154 ~v~~a~~~a~~~~r~~~gP~lIe~~t~ 180 (293)
+..+.+.+.++ + -+|=+|.+.-|
T Consensus 88 ~~~~~~~~~l~---~-~~~Dliv~agy 110 (229)
T 3auf_A 88 AFDAALAERLQ---A-YGVDLVCLAGY 110 (229)
T ss_dssp HHHHHHHHHHH---H-TTCSEEEESSC
T ss_pred hccHHHHHHHH---h-cCCCEEEEcCh
Confidence 33333333333 2 34555555444
No 147
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=25.00 E-value=48 Score=33.69 Aligned_cols=44 Identities=18% Similarity=0.234 Sum_probs=33.9
Q ss_pred CCceEEEEeCcccccchHH--------HHHHHHHhhcCCCEEEEEEeCCccc
Q 022717 77 KDACAVTYFGDGGTSEGDF--------HAALNFSAVTEAPVIFICRNNGWAI 120 (293)
Q Consensus 77 ~~~~vv~~~GDGa~~~G~~--------~Eal~~A~~~~lpvi~vi~NN~~~~ 120 (293)
.++.|+++.-|-.++.|.+ .-++.+|...++|+|++++|.|--+
T Consensus 119 ~Gr~vvVianD~t~~gGS~g~~~~~K~~ra~elA~~~glP~I~l~dsgGARi 170 (793)
T 2x24_A 119 EGRDIILISNDITFRIGSFGPGEDLLYLRASELARAEGIPRVYLAANSGARI 170 (793)
T ss_dssp TCEEEEEEEECSSGGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCCBCC
T ss_pred CCeEEEEEEECCcccCCCCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCcCc
Confidence 4577888888877655543 3467889999999999999988655
No 148
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=24.87 E-value=1.7e+02 Score=22.87 Aligned_cols=79 Identities=10% Similarity=0.065 Sum_probs=43.0
Q ss_pred cccCccHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCCC-EEEEEEeCCccccccccCccCcccHHH
Q 022717 57 TIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVV 135 (293)
Q Consensus 57 ~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lp-vi~vi~NN~~~~~~~~~~~~~~~d~~~ 135 (293)
.+|.|-+..++..++.++..-+..+.++.+|+... .+ .+...+-. +++++...|+... ..+..+
T Consensus 44 i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~----~~---~~~~~~~~d~~i~iS~sG~t~~--------~~~~~~ 108 (187)
T 3sho_A 44 VVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTL----TI---TLANLRPTDLMIGVSVWRYLRD--------TVAALA 108 (187)
T ss_dssp EECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHHH----HH---HHHTCCTTEEEEEECCSSCCHH--------HHHHHH
T ss_pred EEecCchHHHHHHHHHHHHhcCCCEEEecCCchhH----HH---HHhcCCCCCEEEEEeCCCCCHH--------HHHHHH
Confidence 34555566666666666655555566665444322 11 12222323 6666655443221 124567
Q ss_pred HHhhcCceEEEEeCC
Q 022717 136 KGRAYGVRSIRVDGN 150 (293)
Q Consensus 136 ~a~a~G~~~~~VdG~ 150 (293)
.++..|++++-+-++
T Consensus 109 ~ak~~g~~vi~IT~~ 123 (187)
T 3sho_A 109 GAAERGVPTMALTDS 123 (187)
T ss_dssp HHHHTTCCEEEEESC
T ss_pred HHHHCCCCEEEEeCC
Confidence 788889999888654
No 149
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=24.73 E-value=1.7e+02 Score=23.34 Aligned_cols=48 Identities=10% Similarity=0.010 Sum_probs=34.1
Q ss_pred ccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEe
Q 022717 131 DGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 179 (293)
Q Consensus 131 ~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t 179 (293)
..+.+.++.+|+.+...+--...++.+.+++..+.- .....++|-+..
T Consensus 58 ~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~d-h~~~dc~vv~il 105 (164)
T 1qtn_A 58 GALTTTFEELHFEIKPHDDCTVEQIYEILKIYQLMD-HSNMDCFICCIL 105 (164)
T ss_dssp HHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHSC-CTTCSCEEEEEE
T ss_pred HHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHHhh-ccCCCEEEEEeC
Confidence 356778899999998888778889999988874321 134556666544
No 150
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=24.69 E-value=64 Score=31.30 Aligned_cols=43 Identities=19% Similarity=0.165 Sum_probs=31.2
Q ss_pred CceEEEEeCcccccchH--------HHHHHHHHhhcCCCEEEEEEeCCccc
Q 022717 78 DACAVTYFGDGGTSEGD--------FHAALNFSAVTEAPVIFICRNNGWAI 120 (293)
Q Consensus 78 ~~~vv~~~GDGa~~~G~--------~~Eal~~A~~~~lpvi~vi~NN~~~~ 120 (293)
++.|+++.-|.++.-|. +.-++.+|...++|+|.++++.+--+
T Consensus 107 Gr~v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~~lP~I~l~dSGGARm 157 (548)
T 2bzr_A 107 GRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGINDGAGARI 157 (548)
T ss_dssp TEEEEEEEECTTSGGGCCCHHHHHHHHHHHHHHHHHTCCEEEEECCCSCCG
T ss_pred CEEEEEEEEcCccccCCCChhHHHHHHHHHHHHHHcCCCEEEEEcCCCCCc
Confidence 56788888888776554 34567778888999988888766543
No 151
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=24.39 E-value=84 Score=25.04 Aligned_cols=35 Identities=17% Similarity=0.136 Sum_probs=26.6
Q ss_pred ceEEEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeC
Q 022717 79 ACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN 116 (293)
Q Consensus 79 ~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN 116 (293)
..+|+.++ ....|..+| +.+|...+.||+.+..+.
T Consensus 79 D~vva~~~--~~d~Gt~~E-iGyA~algKPVi~l~~~~ 113 (165)
T 2khz_A 79 DVVVAEVT--QPSLGVGYE-LGRAVALGKPILCLFRPQ 113 (165)
T ss_dssp SEEEEECS--SCCHHHHHH-HHHHHHTCSSEEEEECTT
T ss_pred CEEEEECC--CCCCCHHHH-HHHHHHCCCEEEEEEcCC
Confidence 35555555 567788888 999999999999886654
No 152
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=24.21 E-value=3.1e+02 Score=25.49 Aligned_cols=58 Identities=19% Similarity=0.144 Sum_probs=32.8
Q ss_pred HhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcE
Q 022717 102 SAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPI 173 (293)
Q Consensus 102 A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~ 173 (293)
|+..++++++|+-.+- ...-.+..+.||..++.+++.+ ....+.+.+.+.+++.++..
T Consensus 194 Aa~~Gl~~~IvmP~~~------------s~~k~~~~r~~GAeVv~v~~~~--~~~~a~~~a~el~~~~~~~~ 251 (430)
T 4aec_A 194 AASRGYRLILTMPASM------------SMERRVLLKAFGAELVLTDPAK--GMTGAVQKAEEILKNTPDAY 251 (430)
T ss_dssp HHHHTCEEEEEEETTS------------CHHHHHHHHHTTCEEEEECGGG--HHHHHHHHHHHHHHHSTTEE
T ss_pred HHHhCCEEEEEEcCCC------------CHHHHHHHHHCCCEEEEECCCC--ChHHHHHHHHHHHHhcCCcE
Confidence 5667999877775431 1122346788999999887422 22334444544444443433
No 153
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=24.13 E-value=65 Score=28.96 Aligned_cols=35 Identities=23% Similarity=0.196 Sum_probs=21.9
Q ss_pred ceEEEEeCcccccchHHHHHHHHHhhcCCCEEEE---EEeCCcc
Q 022717 79 ACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFI---CRNNGWA 119 (293)
Q Consensus 79 ~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~v---i~NN~~~ 119 (293)
...+++-|||++.. +..++ .+++|+|-| |+|+-.+
T Consensus 96 d~LvvIGGdgS~~~-----a~~L~-~~~i~vvgiPkTIDNDl~~ 133 (320)
T 1pfk_A 96 DALVVIGGDGSYMG-----AMRLT-EMGFPCIGLPGTIDNDIKG 133 (320)
T ss_dssp CEEEEEECHHHHHH-----HHHHH-HTTCCEEEEEBCTTCCCTT
T ss_pred CEEEEECCCchHHH-----HHHHH-hhCCCEEEEeccccCCCCC
Confidence 34677779999852 12222 358898776 6666544
No 154
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=24.09 E-value=99 Score=26.22 Aligned_cols=84 Identities=12% Similarity=0.162 Sum_probs=54.3
Q ss_pred ccCccHHHHHHHHHhhhcCC----------CceEEEEeCcccc--cchHHHHHHHHHhhcCC-CEEEEEE--eCCccccc
Q 022717 58 IATQLPHAVGAAYALKMDRK----------DACAVTYFGDGGT--SEGDFHAALNFSAVTEA-PVIFICR--NNGWAIST 122 (293)
Q Consensus 58 lG~~lp~A~G~A~a~k~~~~----------~~~vv~~~GDGa~--~~G~~~Eal~~A~~~~l-pvi~vi~--NN~~~~~~ 122 (293)
+..|++.+--+.-...+..+ ..+.-...=+|+. ..|....++.+|..-+| |.-+||+ |..
T Consensus 105 ~tTGISa~DRa~Ti~~lad~~~~~~Df~~PGHvfPL~A~~gGvl~R~GhTEAavdLarLAGl~Pa~vicEi~~~d----- 179 (217)
T 1g57_A 105 VTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDD----- 179 (217)
T ss_dssp CSSSCSHHHHHHHHHHHHSTTCCGGGEEEEEEEEEEECCTTGGGTCCSHHHHHHHHHHHTTSCSCEEEEEBBCTT-----
T ss_pred CCCCcCHHHHHHHHHHHhCCCCCHHHcCCCCCccceeecCCCcccCCCcHHHHHHHHHHcCCCceEEEEEEeCCC-----
Confidence 44566665555444444332 3333334444665 37778788999999998 8777787 322
Q ss_pred cccCccCcccHHHHHhhcCceEEEEe
Q 022717 123 PISDQFRSDGAVVKGRAYGVRSIRVD 148 (293)
Q Consensus 123 ~~~~~~~~~d~~~~a~a~G~~~~~Vd 148 (293)
....+.+++.++|+.+|++.+.+.
T Consensus 180 --G~mar~~~l~~fA~~h~l~~iti~ 203 (217)
T 1g57_A 180 --GTMARAPECIEFANKHNMALVTIE 203 (217)
T ss_dssp --SSBCCHHHHHHHHHHTTCEEEEHH
T ss_pred --CCccCHHHHHHHHHHcCCCEEEHH
Confidence 123345678899999999999865
No 155
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=24.09 E-value=86 Score=24.44 Aligned_cols=44 Identities=16% Similarity=0.181 Sum_probs=28.7
Q ss_pred cHHHHHhhcCceEEE--EeCCCH--HHHHHHHHHHHHHhhccCCcEEEEEE
Q 022717 132 GAVVKGRAYGVRSIR--VDGNDA--LAIYSAVHAAREMAIGEGRPILIEAL 178 (293)
Q Consensus 132 d~~~~a~a~G~~~~~--VdG~D~--~~v~~a~~~a~~~~r~~~gP~lIe~~ 178 (293)
+..+..+..|...+. +|-.|+ +++.+.++.+.+ ..++|+||.+.
T Consensus 58 ~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~---~~G~dVLVnnA 105 (157)
T 3gxh_A 58 DEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQ---HKGKDVLVHCL 105 (157)
T ss_dssp THHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHH---TTTSCEEEECS
T ss_pred cHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHh---cCCCCEEEECC
Confidence 345556667776654 577777 777777766654 23449998874
No 156
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=23.90 E-value=3.2e+02 Score=23.68 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=20.2
Q ss_pred CCceEEEEeCcccccchHHHHHHHHHh-hcCCCEE
Q 022717 77 KDACAVTYFGDGGTSEGDFHAALNFSA-VTEAPVI 110 (293)
Q Consensus 77 ~~~~vv~~~GDGa~~~G~~~Eal~~A~-~~~lpvi 110 (293)
.+...+.+.-|..+.+|.+. -|..+. .-++||+
T Consensus 91 ~GA~~IsVltd~~~f~Gs~~-~L~~ir~~v~lPVl 124 (272)
T 3tsm_A 91 GGAACLSVLTDTPSFQGAPE-FLTAARQACSLPAL 124 (272)
T ss_dssp TTCSEEEEECCSTTTCCCHH-HHHHHHHTSSSCEE
T ss_pred CCCCEEEEeccccccCCCHH-HHHHHHHhcCCCEE
Confidence 45567777778777656543 244433 3578976
No 157
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=23.85 E-value=98 Score=29.81 Aligned_cols=43 Identities=21% Similarity=0.176 Sum_probs=29.9
Q ss_pred CceEEEEeCcccccchH--------HHHHHHHHhhcCCCEEEEEEeCCccc
Q 022717 78 DACAVTYFGDGGTSEGD--------FHAALNFSAVTEAPVIFICRNNGWAI 120 (293)
Q Consensus 78 ~~~vv~~~GDGa~~~G~--------~~Eal~~A~~~~lpvi~vi~NN~~~~ 120 (293)
++.|+++.-|.++.-|. +..++.+|...++|+|.++++.+--+
T Consensus 97 Gr~v~v~a~D~t~~gGS~g~~~~~Ki~r~~e~A~~~~lPvI~l~dSgGAR~ 147 (527)
T 1vrg_A 97 GRKVAVFSQDFTVMGGSLGEMHAKKIVKLLDLALKMGIPVIGINDSGGARI 147 (527)
T ss_dssp TEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCG
T ss_pred CEEEEEEEEeccccCccccHHHHHHHHHHHHHHHHcCCCEEEEECCCCCCc
Confidence 56777777786554442 33456778888999999988776544
No 158
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=23.62 E-value=93 Score=27.55 Aligned_cols=61 Identities=10% Similarity=-0.100 Sum_probs=35.1
Q ss_pred EEEeCcccccchHHHHHHHHHhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeCCC
Q 022717 82 VTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGND 151 (293)
Q Consensus 82 v~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D 151 (293)
++|+|-+.|.- ...++|--+ +..|+.|+.|..-.. . ......+.++|+.+|+|++..+..+
T Consensus 3 ivf~gt~~fa~-~~L~~L~~~---~~~i~~Vvt~~d~~~----g-~~~~~~v~~~A~~~gIpv~~~~~~~ 63 (305)
T 2bln_A 3 TVVFAYHDMGC-LGIEALLAA---GYEISAIFTHTDNPG----E-KAFYGSVARLAAERGIPVYAPDNVN 63 (305)
T ss_dssp EEEEECHHHHH-HHHHHHHHT---TCEEEEEECCCC-----------CCCCHHHHHHHHTCCEECCSCCC
T ss_pred EEEEEcCHHHH-HHHHHHHHC---CCcEEEEEcCCCCCC----C-CcCccHHHHHHHHcCCCEECCCcCC
Confidence 67777777652 233444322 456777776542111 1 1223467889999999999886533
No 159
>4fm4_A NitrIle hydratase alpha subunit; iron type hydratase, hydrolysis, sulfinic acid, lyase; 2.38A {Comamonas testosteroni}
Probab=23.55 E-value=46 Score=28.00 Aligned_cols=25 Identities=4% Similarity=0.040 Sum_probs=20.9
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHH
Q 022717 211 TRFRKWIESNGWWNGDIESELRSSV 235 (293)
Q Consensus 211 ~~~~~~L~~~g~~~~~~~~~i~~~~ 235 (293)
..++..|+++|+++++.++.+.+.+
T Consensus 14 ~ALe~lL~eKGli~~~~id~~~~~~ 38 (209)
T 4fm4_A 14 DALFVLTKELGLVTDQTVPDYEDAL 38 (209)
T ss_dssp HHHHHHHHHTTSCCTTHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 4588899999999999998887643
No 160
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=23.34 E-value=85 Score=27.66 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=27.8
Q ss_pred CceEEEEeCc-----ccccchH---HHHHHHHHhhcCCCEEEEEEeCCc
Q 022717 78 DACAVTYFGD-----GGTSEGD---FHAALNFSAVTEAPVIFICRNNGW 118 (293)
Q Consensus 78 ~~~vv~~~GD-----Ga~~~G~---~~Eal~~A~~~~lpvi~vi~NN~~ 118 (293)
++.|+++.=| |++..-. +...+.+|...++|+|++++..+.
T Consensus 120 G~~V~v~a~d~~~~gGs~g~~~~~K~~r~ie~A~~~~lPlI~l~dsgGa 168 (285)
T 2f9i_B 120 GMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENRLPFILFSASGGA 168 (285)
T ss_dssp TEEEEEEEECTTTGGGCCCHHHHHHHHHHHHHHHHTTCCEEEEEEECSC
T ss_pred CEEEEEEEEccccccCcCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCc
Confidence 4566667777 4443211 234677888999999999998775
No 161
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=23.32 E-value=3.6e+02 Score=23.18 Aligned_cols=106 Identities=11% Similarity=-0.061 Sum_probs=59.3
Q ss_pred cCccHHHHHHHHHhhhcCCCceEEEEe--Ccccc--cchHHHHHHHHHhhc-CCCEEEEEEeCCccccccccCccCcccH
Q 022717 59 ATQLPHAVGAAYALKMDRKDACAVTYF--GDGGT--SEGDFHAALNFSAVT-EAPVIFICRNNGWAISTPISDQFRSDGA 133 (293)
Q Consensus 59 G~~lp~A~G~A~a~k~~~~~~~vv~~~--GDGa~--~~G~~~Eal~~A~~~-~lpvi~vi~NN~~~~~~~~~~~~~~~d~ 133 (293)
+..++..--.+++.++..-+-.++-+. +.+.+ +....+|.+..+... +.++..++. | ..-
T Consensus 20 ~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~~-n--------------~~~ 84 (295)
T 1ydn_A 20 KRFVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLVP-N--------------MKG 84 (295)
T ss_dssp SSCCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEECS-S--------------HHH
T ss_pred CCCcCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEeC-C--------------HHH
Confidence 344566666666666665444344333 22221 112455666655443 344433331 1 122
Q ss_pred HHHHhhcCceEEEEe------------CCCHHHHHHHHHHHHHHhhccCCcEEEEEEe
Q 022717 134 VVKGRAYGVRSIRVD------------GNDALAIYSAVHAAREMAIGEGRPILIEALT 179 (293)
Q Consensus 134 ~~~a~a~G~~~~~Vd------------G~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t 179 (293)
.+++...|++.+.++ +.+.++..+.++++++++++.+.++-.++.+
T Consensus 85 i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~ 142 (295)
T 1ydn_A 85 YEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSC 142 (295)
T ss_dssp HHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEE
Confidence 345666789888887 4567777777888888888777665544543
No 162
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=23.07 E-value=3.6e+02 Score=23.71 Aligned_cols=40 Identities=18% Similarity=0.121 Sum_probs=22.3
Q ss_pred HHHH-HhhcCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeC
Q 022717 98 ALNF-SAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG 149 (293)
Q Consensus 98 al~~-A~~~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG 149 (293)
++.. |+..++++++|+-.+- + ..-.+..+.||..++.+++
T Consensus 86 alA~aa~~~G~~~~iv~p~~~-----~-------~~k~~~~~~~GA~V~~~~~ 126 (334)
T 3tbh_A 86 SLAHLGAIRGYKVIITMPESM-----S-------LERRCLLRIFGAEVILTPA 126 (334)
T ss_dssp HHHHHHHHHTCEEEEEEETTS-----C-------HHHHHHHHHTTCEEEEECG
T ss_pred HHHHHHHHhCCCEEEEECCCC-----C-------HHHHHHHHHCCCEEEEECC
Confidence 3444 4567899777775431 0 1112345666776666654
No 163
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=23.06 E-value=2.6e+02 Score=22.06 Aligned_cols=74 Identities=12% Similarity=0.106 Sum_probs=44.0
Q ss_pred CcHHHHHHHHHHCC---CCCHHHHHHHHHH---------------HHHHHHHHHHHH-HhCCCCCcccccccccCCCCcc
Q 022717 208 DPVTRFRKWIESNG---WWNGDIESELRSS---------------VRKQILHALQEA-EKAEKPPISDLFTDVYDVSPSN 268 (293)
Q Consensus 208 dPi~~~~~~L~~~g---~~~~~~~~~i~~~---------------~~~~v~~a~~~a-~~~~~p~~~~~~~~v~~~~~~~ 268 (293)
+-+.-+|+.|.+.| +.|.+++++.-++ +-....=++..| .+. ...|+.+ --||+. +
T Consensus 14 ~lV~pmR~ELt~~Gf~eL~T~e~Vd~a~~~~~GTtlVvVNSVCGCAag~ARPaa~~a~l~~-~kkPD~l-vTVFAG---q 88 (147)
T 3fhk_A 14 QLVVPMRRELTGAGFEELTTAEEVENFMEKAEGTTLVVVNSVCGCAAGLARPAATQAVLQN-DKTPDNT-VTVFAG---Q 88 (147)
T ss_dssp HHHHHHHHHHHTTTCEECCSHHHHHHHHHHCCSEEEEEEECSSHHHHHTHHHHHHHHHHHC-SSCCSEE-EEEETT---T
T ss_pred HHHHHHHHHHHHhCccccCCHHHHHHHHhcCCCcEEEEEeccccccccccCHHHHHHhhhc-CCCCCce-EEeccC---C
Confidence 55677999999999 6788888775544 112233445555 443 2233333 346764 4
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 022717 269 LREQEHSLRETIKKHPQD 286 (293)
Q Consensus 269 ~~~~~~~~~~~~~~~p~~ 286 (293)
.+|..+..|+.+..+|..
T Consensus 89 DkEAt~~aR~yf~~~pPS 106 (147)
T 3fhk_A 89 DKEATAKMREYFTGAAPS 106 (147)
T ss_dssp SHHHHHHHHTTSTTCCCC
T ss_pred CHHHHHHHHHhcCCCCCC
Confidence 456666777766666543
No 164
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=23.00 E-value=70 Score=28.68 Aligned_cols=35 Identities=17% Similarity=0.023 Sum_probs=22.8
Q ss_pred ceEEEEeCcccccchHHHHHHHHHhhcCCCEEEE---EEeCCcc
Q 022717 79 ACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFI---CRNNGWA 119 (293)
Q Consensus 79 ~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~v---i~NN~~~ 119 (293)
...+++-|||++.. .+....+++|+|-| |+|+-..
T Consensus 95 d~L~~IGGdgS~~~------a~~l~~~~i~vigiPkTIDNDl~~ 132 (319)
T 4a3s_A 95 EGLVVIGGDGSYMG------AKKLTEHGFPCVGVPGTIDNDIPG 132 (319)
T ss_dssp CEEEEEECTTHHHH------HHHHHHTTCCEEEEEEETTCCCTT
T ss_pred CEEEEeCCcHHHHH------HHHHhccCCcEEEeeccccCCCCC
Confidence 45788899999852 12234578998766 5665544
No 165
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=22.83 E-value=2.3e+02 Score=20.76 Aligned_cols=58 Identities=9% Similarity=0.135 Sum_probs=34.0
Q ss_pred cCCCEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHh
Q 022717 105 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMA 166 (293)
Q Consensus 105 ~~lpvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~ 166 (293)
.+.|+++|++- .-. ............++++.+|++.+.+...+-..+.+.+....+.+
T Consensus 107 ~~~piilv~nK--~Dl--~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~gi~~l~~~l~~~~ 164 (167)
T 1kao_A 107 EKVPVILVGNK--VDL--ESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQM 164 (167)
T ss_dssp SCCCEEEEEEC--GGG--GGGCCSCHHHHHHHHHHHTSCEEEECTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEC--Ccc--cccccCCHHHHHHHHHHhCCCEEEecCCCCcCHHHHHHHHHHHH
Confidence 46787766653 221 11111122344567778899999998877766666666555443
No 166
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=22.58 E-value=1.6e+02 Score=25.51 Aligned_cols=70 Identities=6% Similarity=-0.064 Sum_probs=43.3
Q ss_pred EEEEEEeCCccccccccCc----cCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEe
Q 022717 109 VIFICRNNGWAISTPISDQ----FRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 179 (293)
Q Consensus 109 vi~vi~NN~~~~~~~~~~~----~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~t 179 (293)
+.+||+|-.|......... .....+.+..+.+|+.+...+--+..++.+++++..+.-. .+..++|-+..
T Consensus 23 ~aLIInn~~f~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~~h-~~~D~~vv~il 96 (277)
T 1nw9_B 23 HCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELARQDH-GALDCCVVVIL 96 (277)
T ss_dssp EEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTEEEEEEESCCHHHHHHHHHHHHHSCC-TTCSEEEEEEE
T ss_pred EEEEEeCcccCCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhc-ccCCeEEEEEe
Confidence 6677777677543211111 1123567778899999988877788899999888764211 23456655543
No 167
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=22.57 E-value=1.6e+02 Score=25.66 Aligned_cols=70 Identities=7% Similarity=0.096 Sum_probs=43.7
Q ss_pred CEEEEEEeCCccccccccCc----cCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEE
Q 022717 108 PVIFICRNNGWAISTPISDQ----FRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEAL 178 (293)
Q Consensus 108 pvi~vi~NN~~~~~~~~~~~----~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~~ 178 (293)
.+.+||+|-.|.-.+..... .....+.+..+.+|+.+...+--+..++.++++++.+. ...+..++|-+.
T Consensus 22 g~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~~~~~-~h~~~d~~vv~i 95 (278)
T 3od5_A 22 GIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTV-SHADADCFVCVF 95 (278)
T ss_dssp CEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHS-CCTTBSCEEEEE
T ss_pred CEEEEEeccccCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhh-cccCCCEEEEEE
Confidence 37777877777532111111 11235677889999999988878889999999986431 113345555443
No 168
>4fm4_B NitrIle hydratase beta subunit; iron type hydratase, hydrolysis, sulfinic acid, lyase; 2.38A {Comamonas testosteroni}
Probab=22.54 E-value=61 Score=27.29 Aligned_cols=25 Identities=12% Similarity=-0.066 Sum_probs=21.1
Q ss_pred HHHHHhCCCcHHHHHHHHHHCCCCCHHHHHH
Q 022717 200 IEWWRTTQDPVTRFRKWIESNGWWNGDIESE 230 (293)
Q Consensus 200 ~~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~ 230 (293)
++.|. ..+.+.|+++|++|++|+++
T Consensus 69 Ye~Wl------~ale~lLvekG~it~~EL~a 93 (206)
T 4fm4_B 69 FERVF------TTAVTLCIEKGVFTAAELEA 93 (206)
T ss_dssp HHHHH------HHHHHHHHHTTSSCHHHHHH
T ss_pred HHHHH------HHHHHHHHHcCCcCHHHHhh
Confidence 67775 56889999999999998864
No 169
>3hht_A NitrIle hydratase alpha subunit; alpha and beta proteins (A+B), lyase; 1.16A {Geobacillus pallidus} SCOP: d.149.1.1 PDB: 2dpp_A 1v29_A
Probab=22.51 E-value=58 Score=27.54 Aligned_cols=26 Identities=8% Similarity=0.116 Sum_probs=22.1
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHH
Q 022717 210 VTRFRKWIESNGWWNGDIESELRSSV 235 (293)
Q Consensus 210 i~~~~~~L~~~g~~~~~~~~~i~~~~ 235 (293)
...++..|+++|+++.++++.+.+.+
T Consensus 29 ~~Al~~ll~ekg~i~~~~~~~~~~~~ 54 (216)
T 3hht_A 29 AKALESLLIEKGHLSSDAIERVIKHY 54 (216)
T ss_dssp HHHHHHHHHHTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 35689999999999999999987653
No 170
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=22.28 E-value=83 Score=30.39 Aligned_cols=41 Identities=20% Similarity=0.207 Sum_probs=22.3
Q ss_pred CceEEEEeCcccccchH--------HHHHHHHHhhcCCCEEEEEEeCCc
Q 022717 78 DACAVTYFGDGGTSEGD--------FHAALNFSAVTEAPVIFICRNNGW 118 (293)
Q Consensus 78 ~~~vv~~~GDGa~~~G~--------~~Eal~~A~~~~lpvi~vi~NN~~ 118 (293)
++.|+++.-|..+.-|. +.-++.+|...++|+|.+++..+-
T Consensus 96 Gr~v~v~a~D~tv~gGS~g~~~~~Ki~ra~e~A~~~~lP~I~l~dSgGa 144 (530)
T 3iav_A 96 GRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALKTGCPVVGINDSGGA 144 (530)
T ss_dssp TEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCSB
T ss_pred CEEEEEEEECCCcceEeccHHHHHHHHHHHHHHHHcCCCEEEEEcCCCc
Confidence 34556666665554332 223445666666776666665554
No 171
>3o3m_B Beta subunit 2-hydroxyacyl-COA dehydratase; atypical dehydratase, lyase; 1.82A {Clostridium difficile} PDB: 3o3n_B* 3o3o_B
Probab=22.19 E-value=3.9e+02 Score=24.10 Aligned_cols=88 Identities=13% Similarity=0.026 Sum_probs=50.0
Q ss_pred ChHHHHHHHhCCCcHHHHHHHHHHC-C-CCCHHHHHHH---HHHHHHHHHHHHHHHHhCCCCC-ccccccc---ccCCCC
Q 022717 196 PVDEIEWWRTTQDPVTRFRKWIESN-G-WWNGDIESEL---RSSVRKQILHALQEAEKAEKPP-ISDLFTD---VYDVSP 266 (293)
Q Consensus 196 ~~~e~~~~~~~~dPi~~~~~~L~~~-g-~~~~~~~~~i---~~~~~~~v~~a~~~a~~~~~p~-~~~~~~~---v~~~~~ 266 (293)
++..++.|+ +=+.++.++|.+. | -+|++.+.+. .++.++.+.+..+.+...|.|- ..+++.. .|.-.+
T Consensus 129 ~~~~~~y~~---~el~~l~~~LE~~tG~~i~~e~L~eai~~~N~~r~~~~~~~~l~~~~p~pisg~d~~~~~~~~~~~~~ 205 (385)
T 3o3m_B 129 LEAGVKYLI---SEYKGVKRELEEICGYEIEEAKIHESIEVYNEHRKTMRDFVEVAYKHSNTIKPSIRSLVIKSGFFMRK 205 (385)
T ss_dssp SHHHHHHHH---HHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHGGGGSCH
T ss_pred CHHHHHHHH---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHhheeCCH
Confidence 344567775 3456777777643 2 4888877664 3456667777777777665442 1123222 122234
Q ss_pred ccHHHHHHHHHHHHHhCCCC
Q 022717 267 SNLREQEHSLRETIKKHPQD 286 (293)
Q Consensus 267 ~~~~~~~~~~~~~~~~~p~~ 286 (293)
....+..+.|.+.+++.|+.
T Consensus 206 ~~~~~~~~~l~~el~~~~~~ 225 (385)
T 3o3m_B 206 EEHTELVKDLIAKLNAMPEE 225 (385)
T ss_dssp HHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHhhhhc
Confidence 44455566777777766653
No 172
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=22.06 E-value=1.3e+02 Score=25.71 Aligned_cols=68 Identities=10% Similarity=0.041 Sum_probs=41.5
Q ss_pred EEEEEEeCCcccccccc-Cc---cCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 109 VIFICRNNGWAISTPIS-DQ---FRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 109 vi~vi~NN~~~~~~~~~-~~---~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
+.+||.|-.|.-.+... .. .....+.+..+.+|+.+....--+..++.+++++..+.. ..+..++|-+
T Consensus 18 ~aLIInn~~f~~~~~l~~r~g~~~D~~~l~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~~-~~~~d~~v~~ 89 (250)
T 2j32_A 18 LCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKED-HSKRSSFVCV 89 (250)
T ss_dssp EEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHTSC-CTTEEEEEEE
T ss_pred EEEEEechhcCCCCCCcCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHhh-ccCCCEEEEE
Confidence 66677766675421111 11 112356777889999998887778888998888876431 1233455544
No 173
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=22.04 E-value=72 Score=28.65 Aligned_cols=35 Identities=23% Similarity=0.098 Sum_probs=21.8
Q ss_pred ceEEEEeCcccccchHHHHHHHHHhhcCCCEEEE---EEeCCcc
Q 022717 79 ACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFI---CRNNGWA 119 (293)
Q Consensus 79 ~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~v---i~NN~~~ 119 (293)
...+++-|||++.. +..+ +.+++|+|-| |+|+-.+
T Consensus 95 d~LvvIGGdgS~~~-----a~~L-~~~~i~vvgiPkTIDNDl~~ 132 (319)
T 1zxx_A 95 DAVVVIGGDGSYHG-----ALQL-TRHGFNSIGLPGTIDNDIPY 132 (319)
T ss_dssp CEEEEEECHHHHHH-----HHHH-HHTTCCEEEEEEETTCCCTT
T ss_pred CEEEEECCchHHHH-----HHHH-HHhCCCEEEEeecccCCCCC
Confidence 35677779999852 1222 2358898776 6666544
No 174
>3a8g_A NitrIle hydratase subunit alpha; Fe, iron, lyase, metal-binding, oxidation; 1.11A {Rhodococcus erythropolis} PDB: 3a8h_A 3a8l_A 3a8o_A 2zpb_A 2ahj_A 2cyz_A 2cz6_A 2cz7_A 2d0q_A 2cz1_A 2zpe_A 2zpf_A 2zpg_A 2zph_A 2zpi_A 2qdy_A 3a8m_A 2zcf_A 1ahj_A 2cz0_A*
Probab=21.52 E-value=47 Score=27.94 Aligned_cols=25 Identities=4% Similarity=0.051 Sum_probs=21.3
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHH
Q 022717 211 TRFRKWIESNGWWNGDIESELRSSV 235 (293)
Q Consensus 211 ~~~~~~L~~~g~~~~~~~~~i~~~~ 235 (293)
..++..|+++|+++.++++.+.+.+
T Consensus 24 ~Al~~ll~ekG~i~~~~~~~~~~~~ 48 (207)
T 3a8g_A 24 WALFRALDGKGLVPDGYVEGWKKTF 48 (207)
T ss_dssp HHHHHHHHTTTCSCTTHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 3688999999999999999887653
No 175
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=21.26 E-value=1e+02 Score=29.81 Aligned_cols=20 Identities=30% Similarity=0.441 Sum_probs=9.9
Q ss_pred HHHHHhhcCCCEEEEEEeCC
Q 022717 98 ALNFSAVTEAPVIFICRNNG 117 (293)
Q Consensus 98 al~~A~~~~lpvi~vi~NN~ 117 (293)
++.+|...++|+|.+++..+
T Consensus 132 a~e~A~~~~lPvI~l~dSGG 151 (531)
T 3n6r_B 132 IMDMAMQNGAPVIGINDSGG 151 (531)
T ss_dssp HHHHHHHHTCCEEEEECCCC
T ss_pred HHHHHHHcCCCEEEEeCCCc
Confidence 34445555555555555443
No 176
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=21.21 E-value=1.3e+02 Score=24.74 Aligned_cols=78 Identities=13% Similarity=0.103 Sum_probs=43.4
Q ss_pred cccCccHHHHHHHHHhhhcCCCceEEEEeCcccccchHHHHHHHHHhhcCC-CEEEEEEeCCccccccccCccCcccHHH
Q 022717 57 TIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEA-PVIFICRNNGWAISTPISDQFRSDGAVV 135 (293)
Q Consensus 57 ~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~l-pvi~vi~NN~~~~~~~~~~~~~~~d~~~ 135 (293)
.+|.|.+..++..++.++..-+..+.++ .|+.+..+ .+...+- .+++++...++... ..+..+
T Consensus 64 i~G~G~S~~~A~~~~~~l~~lg~~~~~~-~~~~~~~~-------~~~~~~~~DlvI~iS~SG~t~~--------~i~~~~ 127 (220)
T 3etn_A 64 TSGMGKAGQIAMNIATTFCSTGIPSVFL-HPSEAQHG-------DLGILQENDLLLLISNSGKTRE--------IVELTQ 127 (220)
T ss_dssp EECSHHHHHHHHHHHHHHHHTTCCEEEC-CTTGGGBT-------GGGGCCTTCEEEEECSSSCCHH--------HHHHHH
T ss_pred EEEecHHHHHHHHHHHHHHhcCCcEEEe-CCHHHHHh-------hhccCCCCCEEEEEcCCCCCHH--------HHHHHH
Confidence 4566666667777776665544444444 45544321 1222222 36666665554221 134567
Q ss_pred HHhh--cCceEEEEeCC
Q 022717 136 KGRA--YGVRSIRVDGN 150 (293)
Q Consensus 136 ~a~a--~G~~~~~VdG~ 150 (293)
.++. .|++++-+-++
T Consensus 128 ~ak~~~~Ga~vI~IT~~ 144 (220)
T 3etn_A 128 LAHNLNPGLKFIVITGN 144 (220)
T ss_dssp HHHHHCTTCEEEEEESC
T ss_pred HHHhcCCCCeEEEEECC
Confidence 7888 88888887543
No 177
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=20.82 E-value=1.1e+02 Score=26.15 Aligned_cols=70 Identities=20% Similarity=0.368 Sum_probs=46.1
Q ss_pred CceEEEEeCcccc--cchHHHHHHHHHhhcCC-CEEEEEE--eCC-----ccccccccCccCcccHHHHHhhcCceEEEE
Q 022717 78 DACAVTYFGDGGT--SEGDFHAALNFSAVTEA-PVIFICR--NNG-----WAISTPISDQFRSDGAVVKGRAYGVRSIRV 147 (293)
Q Consensus 78 ~~~vv~~~GDGa~--~~G~~~Eal~~A~~~~l-pvi~vi~--NN~-----~~~~~~~~~~~~~~d~~~~a~a~G~~~~~V 147 (293)
+.+.-...=+|+. ..|....++.+|..-+| |.-+||+ |.. -.+-. .....+.+++.++|+-+|++.+.+
T Consensus 135 GHvfPL~A~~GGVl~R~GHTEAaVDLarLAGl~PagVicEi~~~~~~~~~~~~~~-dG~mar~~~l~~fA~~h~L~iitI 213 (233)
T 1k4i_A 135 GHVFPLRAVAGGVRARRGHTEAGVELCRLAGKRPVAVISEIVDDGQEVEGRAVRA-APGMLRGDECVAFARRWGLKVCTI 213 (233)
T ss_dssp EEEEEEECCTTHHHHCCSHHHHHHHHHHHTTCCSBEEEEEBEECCEECTTSSCEE-SCEECCHHHHHHHHHHTTCEEEEH
T ss_pred CccceeeecCCCeeccCChHHHHHHHHHHcCCCceEEEEEeCCCcccccccccCC-CCCcCCHHHHHHHHHHcCCcEEEH
Confidence 3445555667776 67888889999999998 7555554 320 00000 112234568899999999999987
Q ss_pred e
Q 022717 148 D 148 (293)
Q Consensus 148 d 148 (293)
.
T Consensus 214 ~ 214 (233)
T 1k4i_A 214 E 214 (233)
T ss_dssp H
T ss_pred H
Confidence 5
No 178
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=20.79 E-value=1.3e+02 Score=18.41 Aligned_cols=23 Identities=13% Similarity=0.274 Sum_probs=17.2
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHH
Q 022717 215 KWIESNGWWNGDIESELRSSVRKQ 238 (293)
Q Consensus 215 ~~L~~~g~~~~~~~~~i~~~~~~~ 238 (293)
+.|..+| ++.+|+.+++.+.++-
T Consensus 10 qalkkeg-fspeelaaleselqal 32 (48)
T 1g6u_A 10 QALKKEG-FSPEELAALESELQAL 32 (48)
T ss_dssp HHHHHTT-CSHHHHHHHHHHHHHH
T ss_pred HHHHHcC-CCHHHHHHHHHHHHHH
Confidence 3455667 7899999999887654
No 179
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=20.77 E-value=1.8e+02 Score=23.95 Aligned_cols=39 Identities=10% Similarity=0.150 Sum_probs=26.2
Q ss_pred CcHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 022717 208 DPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAE 247 (293)
Q Consensus 208 dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~ 247 (293)
|-...+++ +...|-+++++....++++++..++-++..+
T Consensus 134 da~~~lKk-~~K~~~iseD~~k~~e~~iQkltd~~i~~id 172 (185)
T 1is1_A 134 DANNDLKA-LLKDKEISEDEDRKAQEEIQKLTDVAVKKID 172 (185)
T ss_dssp HHHHHHHH-HHHTTSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hhhcCCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555 5566778998888888888776666555443
No 180
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=20.64 E-value=1.8e+02 Score=23.92 Aligned_cols=39 Identities=10% Similarity=0.165 Sum_probs=26.0
Q ss_pred CcHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 022717 208 DPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAE 247 (293)
Q Consensus 208 dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~ 247 (293)
|-...+++ +...|-+++++....++++++..++-++..+
T Consensus 134 da~~~lKk-~~K~~~iseD~~k~~e~~iQkltd~~i~~id 172 (185)
T 1wqg_A 134 KAMEELHR-IRKEGEAGEDEVGRAEKDLDKTTHQYVTQID 172 (185)
T ss_dssp HHHHHHHH-HHHTTSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hhhcCCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 44444555 5566778998888888888776666555443
No 181
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=20.53 E-value=3.5e+02 Score=22.32 Aligned_cols=82 Identities=9% Similarity=0.065 Sum_probs=44.2
Q ss_pred ceEEEEeCcccccchHHHHHHHHHhhcCC--CEEEEEEeCCccccccccCccCcccHHHHHhhcCceEEEEeCC---CHH
Q 022717 79 ACAVTYFGDGGTSEGDFHAALNFSAVTEA--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN---DAL 153 (293)
Q Consensus 79 ~~vv~~~GDGa~~~G~~~Eal~~A~~~~l--pvi~vi~NN~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~---D~~ 153 (293)
+++|.+.|-|++.+- . |......++ .++.|+.|+.- ....++|+.+|+|++.++-. +-+
T Consensus 3 rI~vl~SG~g~~~~~-~---l~~l~~~~~~~~i~~Vvs~~~~------------~~~~~~A~~~gIp~~~~~~~~~~~r~ 66 (216)
T 2ywr_A 3 KIGVLVSGRGSNLQA-I---IDAIESGKVNASIELVISDNPK------------AYAIERCKKHNVECKVIQRKEFPSKK 66 (216)
T ss_dssp EEEEEECSCCHHHHH-H---HHHHHTTSSCEEEEEEEESCTT------------CHHHHHHHHHTCCEEECCGGGSSSHH
T ss_pred EEEEEEeCCcHHHHH-H---HHHHHhCCCCCeEEEEEeCCCC------------hHHHHHHHHcCCCEEEeCcccccchh
Confidence 456666688877542 2 222223345 46677776421 12467899999999987532 223
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEee
Q 022717 154 AIYSAVHAAREMAIGEGRPILIEALTY 180 (293)
Q Consensus 154 ~v~~a~~~a~~~~r~~~gP~lIe~~t~ 180 (293)
+..+.+.+.++ + -+|=+|.+.-|
T Consensus 67 ~~~~~~~~~l~---~-~~~Dliv~a~y 89 (216)
T 2ywr_A 67 EFEERMALELK---K-KGVELVVLAGF 89 (216)
T ss_dssp HHHHHHHHHHH---H-TTCCEEEESSC
T ss_pred hhhHHHHHHHH---h-cCCCEEEEeCc
Confidence 33333333333 2 34555555544
No 182
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=20.32 E-value=1.7e+02 Score=25.15 Aligned_cols=55 Identities=5% Similarity=0.054 Sum_probs=35.4
Q ss_pred EEEEEEeCCccccc-c--ccCccCcccHHHHHhhcCceEEEEeCCCHHHHHHHHHHHH
Q 022717 109 VIFICRNNGWAIST-P--ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAR 163 (293)
Q Consensus 109 vi~vi~NN~~~~~~-~--~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~~v~~a~~~a~ 163 (293)
+.+||+|..|.... + .........+.+..+.+|+.+....--+..++.+++++..
T Consensus 22 ~aLIInn~~f~~~~l~~R~G~~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~~~ 79 (259)
T 3sir_A 22 MALIFNHEHFEVPTLKSRAGTNVDCENLTRVLKQLDFEVTVYKDCRYKDILRTIEYSA 79 (259)
T ss_dssp EEEEEEECCC-----------CCHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHHHH
T ss_pred EEEEEeccccCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 67788887775321 1 1111112356778899999988877778888999888865
No 183
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=20.31 E-value=1.1e+02 Score=31.04 Aligned_cols=44 Identities=20% Similarity=0.285 Sum_probs=33.6
Q ss_pred CCceEEEEeCcccccchH--------HHHHHHHHhhcCCCEEEEEEeCCccc
Q 022717 77 KDACAVTYFGDGGTSEGD--------FHAALNFSAVTEAPVIFICRNNGWAI 120 (293)
Q Consensus 77 ~~~~vv~~~GDGa~~~G~--------~~Eal~~A~~~~lpvi~vi~NN~~~~ 120 (293)
.++.|+++.-|..++-|. +.-++.+|...++|+|+++++.|--+
T Consensus 103 ~G~~vvV~a~D~t~~gGS~G~~~~eKi~Ra~e~A~~~~lPvI~l~dSGGARm 154 (758)
T 3k8x_A 103 RGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARI 154 (758)
T ss_dssp TCEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCCBCC
T ss_pred CCeEEEEEEECCccccccCcHHHHHHHHHHHHHHHHcCCCEEEEecCCCcCc
Confidence 356788888898776553 33466789999999999999988655
No 184
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=20.23 E-value=1.4e+02 Score=25.91 Aligned_cols=44 Identities=14% Similarity=0.014 Sum_probs=34.0
Q ss_pred HHHHHhhcCceEEE--E---eCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 022717 133 AVVKGRAYGVRSIR--V---DGNDALAIYSAVHAAREMAIGEGRPILIEA 177 (293)
Q Consensus 133 ~~~~a~a~G~~~~~--V---dG~D~~~v~~a~~~a~~~~r~~~gP~lIe~ 177 (293)
..+.|+.+|+++.+ | |..|..++.+.++++...+|+.+ -++...
T Consensus 169 a~~~A~~~gvp~~~rdvFLD~~~~~~~I~~qL~~a~~~Ar~~G-~AIaIG 217 (261)
T 2qv5_A 169 SGGIAKAISAPQGFADVLLDGEVTEASILRKLDDLERIARRNG-QAIGVA 217 (261)
T ss_dssp HHHHHHHHTCCEEECSEETTSSCSHHHHHHHHHHHHHHHHHHS-EEEEEE
T ss_pred HHHHHHHcCCCeEEeeeecCCCCCHHHHHHHHHHHHHHHHhcC-cEEEEe
Confidence 46789999999988 3 35788999999999999998755 444433
Done!