Query 022719
Match_columns 293
No_of_seqs 200 out of 1596
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 10:03:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022719.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022719hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zdn_A Ubiquitin-conjugating e 100.0 1.8E-38 6.3E-43 272.0 14.4 143 1-146 3-158 (158)
2 2c2v_B Ubiquitin-conjugating e 100.0 1.1E-37 3.6E-42 266.3 14.7 138 8-148 2-152 (154)
3 2aak_A UBC1, ubiquitin conjuga 100.0 2.3E-37 7.8E-42 263.4 16.4 138 8-148 1-151 (152)
4 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.1E-37 3.9E-42 270.1 14.7 140 8-150 1-153 (169)
5 4gpr_A Ubiquitin-conjugating e 100.0 2.7E-37 9.2E-42 262.8 16.1 136 9-147 2-150 (151)
6 1yh2_A HSPC150 protein similar 100.0 4.5E-37 1.5E-41 266.1 16.2 141 9-149 2-156 (169)
7 1z2u_A Ubiquitin-conjugating e 100.0 6.5E-37 2.2E-41 260.0 15.5 136 9-147 2-150 (150)
8 2ayv_A Ubiquitin-conjugating e 100.0 6.7E-37 2.3E-41 264.6 15.8 138 6-146 16-166 (166)
9 2e2c_A Ubiquitin conjugating e 100.0 4.7E-37 1.6E-41 262.6 14.5 141 1-147 1-154 (156)
10 2c4o_A Ubiquitin-conjugating e 100.0 1.3E-36 4.5E-41 262.5 16.5 138 7-147 15-165 (165)
11 2bep_A Ubiquitin-conjugating e 100.0 1.3E-36 4.4E-41 260.7 15.8 138 7-147 4-158 (159)
12 2f4z_A Tgtwinscan_2721 - E2 do 100.0 7.1E-37 2.4E-41 270.4 14.6 144 1-147 22-192 (193)
13 2ucz_A UBC7, ubiquitin conjuga 100.0 9.7E-37 3.3E-41 262.7 15.0 140 8-147 1-164 (165)
14 2r0j_A Ubiquitin carrier prote 100.0 1.9E-36 6.6E-41 257.0 15.0 133 13-148 3-148 (149)
15 2gjd_A Ubiquitin-conjugating e 100.0 2.1E-36 7.2E-41 258.9 15.1 139 8-147 1-157 (157)
16 3h8k_A Ubiquitin-conjugating e 100.0 2.9E-36 1E-40 259.4 16.1 139 9-147 1-163 (164)
17 3rcz_B SUMO-conjugating enzyme 100.0 2.4E-36 8.2E-41 260.4 15.4 142 5-147 4-163 (163)
18 3k9o_A Ubiquitin-conjugating e 100.0 3E-36 1E-40 267.5 14.7 138 8-148 2-156 (201)
19 1jat_A Ubiquitin-conjugating e 100.0 2.3E-36 7.7E-41 258.1 13.0 135 11-148 5-152 (155)
20 2grr_A Ubiquitin-conjugating e 100.0 4.8E-36 1.6E-40 257.7 14.7 140 7-147 3-160 (161)
21 1fxt_A Ubiquitin-conjugating e 100.0 1.4E-36 5E-41 257.6 11.0 133 12-147 2-149 (149)
22 2pwq_A Ubiquitin conjugating e 100.0 2.6E-36 8.9E-41 271.0 13.0 143 6-151 18-174 (216)
23 3bzh_A Ubiquitin-conjugating e 100.0 1.1E-35 3.9E-40 262.9 16.1 135 10-147 47-194 (194)
24 3e46_A Ubiquitin-conjugating e 100.0 1.3E-35 4.3E-40 272.2 16.7 152 5-159 51-224 (253)
25 1i7k_A Ubiquitin-conjugating e 100.0 9E-36 3.1E-40 260.5 13.1 139 7-149 26-177 (179)
26 3fn1_B NEDD8-conjugating enzym 100.0 4.9E-35 1.7E-39 252.5 17.0 142 5-147 8-167 (167)
27 1yrv_A Ubiquitin-conjugating l 100.0 7.7E-36 2.6E-40 258.7 11.7 139 4-144 16-168 (169)
28 1wzv_A Ubiquitin-conjugating e 100.0 7.4E-35 2.5E-39 248.6 13.1 135 11-148 4-152 (155)
29 2y9m_A Ubiquitin-conjugating e 100.0 2E-34 7E-39 250.2 14.0 138 8-147 3-168 (172)
30 3rz3_A Ubiquitin-conjugating e 100.0 2.5E-34 8.6E-39 251.9 14.5 139 9-147 5-173 (183)
31 2awf_A Ubiquitin-conjugating e 100.0 2.6E-34 8.9E-39 249.6 13.1 134 8-141 14-172 (172)
32 1tte_A Ubiquitin-conjugating e 100.0 1.1E-34 3.7E-39 260.3 10.5 136 11-149 2-152 (215)
33 2f4w_A Ubiquitin-conjugating e 100.0 7.1E-34 2.4E-38 250.0 13.5 149 7-159 10-167 (187)
34 2onu_A Ubiquitin-conjugating e 100.0 2E-34 6.7E-39 245.7 7.4 133 12-150 3-150 (152)
35 1c4z_D UBCH7, ubiquitin conjug 100.0 4.2E-34 1.4E-38 243.7 8.1 135 12-149 3-151 (154)
36 1y8x_A Ubiquitin-conjugating e 100.0 3.5E-33 1.2E-37 239.8 13.8 130 9-144 4-147 (160)
37 2z5d_A Ubiquitin-conjugating e 100.0 5.5E-34 1.9E-38 249.2 8.7 138 6-150 18-172 (179)
38 2nvu_C NEDD8-conjugating enzym 100.0 5.3E-33 1.8E-37 243.1 14.4 134 5-144 20-167 (180)
39 4ddg_A Ubiquitin-conjugating e 100.0 1.4E-32 4.8E-37 266.5 17.4 137 10-149 2-151 (399)
40 1yf9_A Ubiquitin carrier prote 100.0 4.9E-33 1.7E-37 241.5 9.8 132 11-149 12-158 (171)
41 2fo3_A Ubiquitin-conjugating e 100.0 2.7E-32 9.2E-37 225.3 12.1 106 5-114 1-117 (125)
42 3o2u_A NEDD8-conjugating enzym 100.0 4.6E-32 1.6E-36 239.0 13.4 135 6-146 24-178 (190)
43 2h2y_A Ubiquitin-conjugating e 100.0 1.6E-31 5.5E-36 223.8 14.6 110 4-118 14-134 (136)
44 4ds2_A Ubiquitin-conjugating e 100.0 9.2E-32 3.1E-36 232.3 8.7 131 6-139 3-163 (167)
45 3ceg_A Baculoviral IAP repeat- 100.0 1.2E-30 4.1E-35 246.1 15.9 144 5-148 70-244 (323)
46 2a7l_A Hypothetical ubiquitin- 100.0 7.3E-31 2.5E-35 220.1 10.9 105 5-113 17-135 (136)
47 2a4d_A Ubiquitin-conjugating e 100.0 1.8E-29 6.1E-34 217.0 11.8 115 7-122 21-152 (160)
48 2q0v_A Ubiquitin-conjugating e 100.0 1.9E-29 6.5E-34 216.0 10.5 112 7-122 17-146 (156)
49 1zuo_A Hypothetical protein LO 100.0 6.1E-30 2.1E-34 224.8 4.2 110 4-115 20-155 (186)
50 1jat_B Ubiquitin-conjugating e 100.0 4.5E-29 1.5E-33 209.3 8.4 102 10-115 5-123 (138)
51 2hlw_A Ubiquitin-conjugating e 100.0 5E-29 1.7E-33 216.2 7.8 113 9-122 33-162 (170)
52 2z6o_A UFM1-conjugating enzyme 99.8 5E-21 1.7E-25 164.3 0.4 87 13-107 34-144 (172)
53 3kpa_A Probable ubiquitin fold 99.4 4.7E-14 1.6E-18 118.9 0.1 80 10-101 33-133 (168)
54 3r3q_A Suppressor protein STP2 99.3 1E-11 3.5E-16 106.6 10.2 101 14-118 31-160 (162)
55 3obq_A Tumor susceptibility ge 98.9 1.4E-09 4.7E-14 91.9 5.0 71 37-116 50-139 (146)
56 2ebm_A RWD domain-containing p 94.8 0.14 4.8E-06 40.8 8.5 88 12-113 11-98 (128)
57 2yz0_A Serine/threonine-protei 94.2 0.28 9.7E-06 39.5 9.4 67 13-80 12-84 (138)
58 2day_A Ring finger protein 25; 94.2 0.2 6.7E-06 39.9 8.2 68 14-81 11-82 (128)
59 3zqs_A E3 ubiquitin-protein li 91.0 1.3 4.3E-05 38.4 9.4 83 14-113 4-86 (186)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 90.3 1.4 4.7E-05 35.2 8.5 67 13-80 12-85 (137)
61 2ebk_A RWD domain-containing p 89.8 1 3.6E-05 35.6 7.4 66 14-80 10-78 (128)
62 2daw_A RWD domain containing p 86.2 3.9 0.00013 33.7 8.9 44 59-115 76-119 (154)
63 2dax_A Protein C21ORF6; RWD do 82.6 1.4 4.8E-05 36.1 4.6 22 59-80 74-95 (152)
64 1b9u_A Protein (ATP synthase); 51.2 13 0.00045 22.6 2.9 20 261-280 6-25 (34)
65 3u3c_B Paxillin LD2 peptide; 4 37.9 20 0.00069 20.6 2.0 20 12-31 6-25 (26)
66 2jo1_A Phospholemman; FXYD1, N 31.3 47 0.0016 24.2 3.5 22 258-279 19-40 (72)
67 2jp3_A FXYD domain-containing 24.6 49 0.0017 23.8 2.6 22 258-279 20-41 (67)
No 1
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-38 Score=271.99 Aligned_cols=143 Identities=25% Similarity=0.512 Sum_probs=129.8
Q ss_pred CCCcCCCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeee
Q 022719 1 MAEDRYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLL 80 (293)
Q Consensus 1 ma~~~~~ms~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~ 80 (293)
|+....+||..+.+||++|+++|++++++||++.+.++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|+
T Consensus 3 ~~~~~~~~s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 82 (158)
T 1zdn_A 3 MNSNVENLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFL 82 (158)
T ss_dssp -----CCSCHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred ccccccccCHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEec
Confidence 66667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c----------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhC
Q 022719 81 T----------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFG 146 (293)
Q Consensus 81 T----------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya 146 (293)
| |.||+++|+ +.|+|.++|++||.+|++||.+ ||+++++ |+.++.+|++.|.++||+|+++|+
T Consensus 83 t~i~HPnv~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 83 TKIFHPNVGANGEICVNVLK---RDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp SCCCCTTBCTTSBBCHHHHT---TTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred cCcccCCCCCCCEEehhhcC---CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 9 999999997 7899999999999999999954 6666554 466778999999999999999986
No 2
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-37 Score=266.25 Aligned_cols=138 Identities=27% Similarity=0.520 Sum_probs=127.9
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec------
Q 022719 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT------ 81 (293)
Q Consensus 8 ms~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T------ 81 (293)
||..+.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 2 ~s~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 81 (154)
T 2c2v_B 2 GSAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPN 81 (154)
T ss_dssp CSCSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCc
Confidence 56678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ----ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCCh
Q 022719 82 ----TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTP 148 (293)
Q Consensus 82 ----G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~~ 148 (293)
|.|||++|+ +.|+|+++|++||.+|++||.+ ||+++++ ++.++.+|+++|.++||+|+++|+..
T Consensus 82 v~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~ 152 (154)
T 2c2v_B 82 VDKLGRICLDILK---DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMN 152 (154)
T ss_dssp BCTTCBBCCHHHH---TSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CccCCeEEchhcc---CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 999999997 7899999999999999999965 7777766 56777899999999999999999864
No 3
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=2.3e-37 Score=263.40 Aligned_cols=138 Identities=28% Similarity=0.608 Sum_probs=128.3
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec------
Q 022719 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT------ 81 (293)
Q Consensus 8 ms~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T------ 81 (293)
||+.+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPN 80 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCC
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ----ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCCh
Q 022719 82 ----TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTP 148 (293)
Q Consensus 82 ----G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~~ 148 (293)
|.||+++|+ +.|+|+++|++||.+|++||.+ +|+++++ |+.++.+|++.|.++||+|+++|+..
T Consensus 81 v~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 81 IYADGSICLDILQ---NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp BCTTSBBCCGGGT---TSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred CCCCCEEechhhc---CCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 999999997 7899999999999999999965 6666654 46677899999999999999999864
No 4
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-37 Score=270.15 Aligned_cols=140 Identities=26% Similarity=0.567 Sum_probs=129.1
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec------
Q 022719 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT------ 81 (293)
Q Consensus 8 ms~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T------ 81 (293)
||+.+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 80 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPN 80 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCC
Confidence 67789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ----ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCChhH
Q 022719 82 ----TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPER 150 (293)
Q Consensus 82 ----G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~~~~ 150 (293)
|.|||++|+ +.|+|+++|++||.+|++||.+ +|+++++ |+.++.++++.|.++||+|+++|+....
T Consensus 81 I~~~G~ICl~iL~---~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~~~~ 153 (169)
T 1ayz_A 81 VYANGEICLDILQ---NRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDDM 153 (169)
T ss_dssp BCTTSBBCCGGGT---TTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCeEeehhhc---cCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcCCCc
Confidence 999999997 7899999999999999999965 6666655 4667789999999999999999986543
No 5
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=2.7e-37 Score=262.81 Aligned_cols=136 Identities=26% Similarity=0.656 Sum_probs=127.5
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec-------
Q 022719 9 KNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT------- 81 (293)
Q Consensus 9 s~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T------- 81 (293)
+..+.+||++|+++|+++++.||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 81 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNI 81 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceE
Confidence 4678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ---ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCC
Q 022719 82 ---TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 147 (293)
Q Consensus 82 ---G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~ 147 (293)
|.||+++|+ ++|+|.++|++||.+|++||.+ ||+++++ ++.++.+|++.|.++||+|+++|+.
T Consensus 82 ~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~ 150 (151)
T 4gpr_A 82 NKNGVICLDILK---DQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYAR 150 (151)
T ss_dssp CTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEccccc---CCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999998 8999999999999999999965 6777665 4677789999999999999999986
No 6
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.5e-37 Score=266.15 Aligned_cols=141 Identities=23% Similarity=0.465 Sum_probs=129.9
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec-------
Q 022719 9 KNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT------- 81 (293)
Q Consensus 9 s~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T------- 81 (293)
|..+.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv 81 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNI 81 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccC
Confidence 5678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ---ccceeccCCCCC-CCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCChh
Q 022719 82 ---TKICLSISNHHP-EHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPE 149 (293)
Q Consensus 82 ---G~ICLsiL~~~p-e~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~~~ 149 (293)
|.|||++|+.|+ +.|+|+++|++||.+|++||.+ +|+++++ |+.++.+|++.|.++||+|+++|+...
T Consensus 82 ~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~~ 156 (169)
T 1yh2_A 82 DSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQK 156 (169)
T ss_dssp CTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC
T ss_pred CcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHcccc
Confidence 999999998665 7899999999999999999955 6666654 456677999999999999999999754
No 7
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=6.5e-37 Score=260.04 Aligned_cols=136 Identities=29% Similarity=0.647 Sum_probs=126.3
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec-------
Q 022719 9 KNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT------- 81 (293)
Q Consensus 9 s~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T------- 81 (293)
|..+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 81 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcC
Confidence 5678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ---ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCC
Q 022719 82 ---TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 147 (293)
Q Consensus 82 ---G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~ 147 (293)
|.||+++|+ +.|+|+++|++||.+|++||.+ ||+++++ ++.++.+|++.|.++||+|+++|+.
T Consensus 82 ~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 82 NSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp CTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCeEeecccc---CCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999998 8899999999999999999954 6666654 4567789999999999999999974
No 8
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=6.7e-37 Score=264.56 Aligned_cols=138 Identities=29% Similarity=0.643 Sum_probs=126.2
Q ss_pred CCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec----
Q 022719 6 YNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT---- 81 (293)
Q Consensus 6 ~~ms~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T---- 81 (293)
...++.+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 16 ~~~~~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 95 (166)
T 2ayv_A 16 NLYFQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYH 95 (166)
T ss_dssp ---CTTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCB
T ss_pred cccCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcC
Confidence 3456678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhC
Q 022719 82 ------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFG 146 (293)
Q Consensus 82 ------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya 146 (293)
|.|||++|+ +.|+|+++|++||.+|++||.+ ||+++++ ++.++.+|++.|.++||+|+++|+
T Consensus 96 PNI~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 96 PNINSQGAICLDILK---DQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp TTBCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CcCCCCCeEEccccc---ccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999998 8999999999999999999955 6666655 456778999999999999999986
No 9
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=4.7e-37 Score=262.62 Aligned_cols=141 Identities=27% Similarity=0.517 Sum_probs=128.4
Q ss_pred CCCcCCCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeee
Q 022719 1 MAEDRYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLL 80 (293)
Q Consensus 1 ma~~~~~ms~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~ 80 (293)
|+ ...|+..+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+
T Consensus 1 m~--~~~~~~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 78 (156)
T 2e2c_A 1 MT--TSKERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFT 78 (156)
T ss_dssp CC--CCCSCCCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred CC--ccccchHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEe
Confidence 66 3446677899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c----------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCC
Q 022719 81 T----------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 147 (293)
Q Consensus 81 T----------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~ 147 (293)
| |.|||++|+ +.|+|+++|++||.+|++||.+ ||+++++ |+.++ +|+++|.++||+|+++|++
T Consensus 79 t~i~HPnv~~~G~iCl~iL~---~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~ 154 (156)
T 2e2c_A 79 TPCWHPNVDQSGNICLDILK---ENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQS 154 (156)
T ss_dssp SCCCBTTBCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCCccCceEECcccc---ccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhcc
Confidence 9 999999997 8899999999999999999965 6666654 45666 7999999999999999864
No 10
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.3e-36 Score=262.47 Aligned_cols=138 Identities=29% Similarity=0.635 Sum_probs=127.4
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec-----
Q 022719 7 NLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----- 81 (293)
Q Consensus 7 ~ms~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T----- 81 (293)
...+.+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 15 ~~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HP 94 (165)
T 2c4o_A 15 PRGSMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP 94 (165)
T ss_dssp -CCHHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBT
T ss_pred cCCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCC
Confidence 456779999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -----ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCC
Q 022719 82 -----TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 147 (293)
Q Consensus 82 -----G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~ 147 (293)
|.||+++|+ +.|+|+++|++||.+|++||.+ ||+++++ ++.++.+|+++|.++||+|+++|+.
T Consensus 95 nV~~~G~ICl~iL~---~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 95 NINSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp TBCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred cCCCCCeEeehhhc---CCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999998 8999999999999999999954 6666654 4567789999999999999999974
No 11
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=1.3e-36 Score=260.68 Aligned_cols=138 Identities=30% Similarity=0.542 Sum_probs=127.5
Q ss_pred CCChHHHHHHHHHHHHHhhC---CCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec--
Q 022719 7 NLKNPAVKRILQEVKEMQSN---PSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT-- 81 (293)
Q Consensus 7 ~ms~~a~kRL~kElk~L~~~---p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T-- 81 (293)
.|++.+.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 4 ~Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 83 (159)
T 2bep_A 4 AMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 83 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCC
Confidence 48899999999999999985 5789999999999999999999999999999999999999999999999999999
Q ss_pred ---------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCC
Q 022719 82 ---------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 147 (293)
Q Consensus 82 ---------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~ 147 (293)
|.|||++|+ +.|+|+++|++||.+|++||.+ +|+++++ ++.++.+|++.|.++||+|+++|+.
T Consensus 84 ~HPni~~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 158 (159)
T 2bep_A 84 WHPNISSVTGAICLDILK---DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 158 (159)
T ss_dssp CBTTBCTTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CccCCCCCCCEEeChhhh---ccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 999999998 7899999999999999999954 6666654 4567779999999999999999985
No 12
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=7.1e-37 Score=270.40 Aligned_cols=144 Identities=25% Similarity=0.478 Sum_probs=122.6
Q ss_pred CCCcCCCCChHHHHHHHHHHHHHhhCCC-------------CCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCC
Q 022719 1 MAEDRYNLKNPAVKRILQEVKEMQSNPS-------------DDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLP 67 (293)
Q Consensus 1 ma~~~~~ms~~a~kRL~kElk~L~~~p~-------------~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP 67 (293)
||..+.+.+..+.+||++|+++|+++++ .||++.+.++|+++|+++|.||++|||+||+|+|+|.||
T Consensus 22 m~~~~~~~~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp 101 (193)
T 2f4z_A 22 MATAQPRGTPREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIP 101 (193)
T ss_dssp ----------CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECC
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECC
Confidence 6666666677789999999999999987 799999999999999999999999999999999999999
Q ss_pred CCCCCCCCeeeeec-----------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHH
Q 022719 68 AEYPFKPPSFMLLT-----------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRA 133 (293)
Q Consensus 68 ~dYP~~PP~v~F~T-----------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~ 133 (293)
++||++||+|+|+| |.|||++|+ +.|+|+++|++||++|++||.+ +|+++++ ++.+|.+|++.
T Consensus 102 ~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~ 178 (193)
T 2f4z_A 102 PDYPYNPPKMKFVTKIWHPNISSQTGAICLDILK---HEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPL 178 (193)
T ss_dssp TTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGGT---TTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHH
T ss_pred CcCCCCCCeEEEecCCccCCCcCCCCEEECcccc---ccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHH
Confidence 99999999999999 999999998 7899999999999999999955 6666655 46777799999
Q ss_pred HHHHHHHHHhhhCC
Q 022719 134 LAIKSREAAPKFGT 147 (293)
Q Consensus 134 f~~kare~~~kya~ 147 (293)
|.++||+|+++|+.
T Consensus 179 f~~~ar~~t~~ya~ 192 (193)
T 2f4z_A 179 FVQTAKLWTETFAK 192 (193)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcc
Confidence 99999999999985
No 13
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=9.7e-37 Score=262.74 Aligned_cols=140 Identities=24% Similarity=0.544 Sum_probs=125.3
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCC-CCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec-----
Q 022719 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLE-ENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----- 81 (293)
Q Consensus 8 ms~~a~kRL~kElk~L~~~p~~gi~~~p~~-~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T----- 81 (293)
|++.+.+||++|+++|++++++||++.+.+ +|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHP 80 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccC
Confidence 678899999999999999999999999875 79999999999999999999999999999999999999999999
Q ss_pred -----ccceeccCCC----------CCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHh
Q 022719 82 -----TKICLSISNH----------HPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAP 143 (293)
Q Consensus 82 -----G~ICLsiL~~----------~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~ 143 (293)
|+|||++|+. +.+.|+|+++|++||.+|++||.+ ||+++++ |+.++.+|+++|.++||+|++
T Consensus 81 Nv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~ 160 (165)
T 2ucz_A 81 NIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSIL 160 (165)
T ss_dssp TBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHH
Confidence 9999999942 147899999999999999999954 5555444 456677999999999999999
Q ss_pred hhCC
Q 022719 144 KFGT 147 (293)
Q Consensus 144 kya~ 147 (293)
+|..
T Consensus 161 ~~~~ 164 (165)
T 2ucz_A 161 KSLG 164 (165)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 9864
No 14
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.9e-36 Score=257.00 Aligned_cols=133 Identities=29% Similarity=0.632 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec----------c
Q 022719 13 VKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----------T 82 (293)
Q Consensus 13 ~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T----------G 82 (293)
.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+| |
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G 82 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKLG 82 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCCC
Confidence 589999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred cceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCCh
Q 022719 83 KICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTP 148 (293)
Q Consensus 83 ~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~~ 148 (293)
+||+++|+ +.|+|+++|++||.+|++||.+ +|+++++ ++.++.+|++.|.++||+|+++|+..
T Consensus 83 ~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 83 RICLDILK---DKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp BBCCGGGT---TTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred EEechhcC---CCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 99999998 8999999999999999999954 6666654 45667799999999999999999864
No 15
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=2.1e-36 Score=258.95 Aligned_cols=139 Identities=23% Similarity=0.505 Sum_probs=124.2
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCC-----CCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec-
Q 022719 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLE-----ENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT- 81 (293)
Q Consensus 8 ms~~a~kRL~kElk~L~~~p~~gi~~~p~~-----~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T- 81 (293)
||+.+.+||++|+++|++++++||++.|.. +|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG 80 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCC
Confidence 677899999999999999999999998874 48999999999999999999999999999999999999999999
Q ss_pred ---------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCC
Q 022719 82 ---------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 147 (293)
Q Consensus 82 ---------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~ 147 (293)
|.||+++|+.+ ++|+|+++|++||.+|++||.+ +|+++++ ++.++.+|++.|.++||+|+++|+.
T Consensus 81 i~HPnv~~~G~iCl~iL~~~-~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 81 FYHPNVYPSGTICLSILNED-QDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp CCCTTBCTTSBBCCGGGCTT-TTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CccCCCCCCCcEeeecccCC-CCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999832 3799999999999999999955 5555544 4566779999999999999999974
No 16
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.9e-36 Score=259.37 Aligned_cols=139 Identities=27% Similarity=0.584 Sum_probs=125.7
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEecCCC-CceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec------
Q 022719 9 KNPAVKRILQEVKEMQSNPSDDFMSLPLEE-NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT------ 81 (293)
Q Consensus 9 s~~a~kRL~kElk~L~~~p~~gi~~~p~~~-di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T------ 81 (293)
++.+.+||++|+++|++++++||++.|.++ |+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 1 a~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPN 80 (164)
T 3h8k_A 1 AGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPN 80 (164)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCC
Confidence 356899999999999999999999998866 9999999999999999999999999999999999999999999
Q ss_pred ----ccceeccCCC----------CCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhh
Q 022719 82 ----TKICLSISNH----------HPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPK 144 (293)
Q Consensus 82 ----G~ICLsiL~~----------~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~k 144 (293)
|+||+++|+. +.+.|+|+++|++||.+|++||.+ ||+++++ |+.+|.+|+++|.++||+|+++
T Consensus 81 V~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~ 160 (164)
T 3h8k_A 81 IYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 160 (164)
T ss_dssp BCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 9999999973 237899999999999999999965 6666655 4667779999999999999998
Q ss_pred hCC
Q 022719 145 FGT 147 (293)
Q Consensus 145 ya~ 147 (293)
+.+
T Consensus 161 s~~ 163 (164)
T 3h8k_A 161 SLG 163 (164)
T ss_dssp HHT
T ss_pred hhc
Confidence 753
No 17
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-36 Score=260.40 Aligned_cols=142 Identities=23% Similarity=0.478 Sum_probs=125.5
Q ss_pred CCCCChHHHHHHHHHHHHHhhCCCCCeEEecCCC-----CceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeee
Q 022719 5 RYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEE-----NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFML 79 (293)
Q Consensus 5 ~~~ms~~a~kRL~kElk~L~~~p~~gi~~~p~~~-----di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F 79 (293)
...-|..|++||++|+++|++++++||++.|.++ |+++|+++|.||++|||+||+|+|+|.||++||++||+|+|
T Consensus 4 ~~~~~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F 83 (163)
T 3rcz_B 4 HHHHSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRF 83 (163)
T ss_dssp -----CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred CcCCcHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEE
Confidence 4566889999999999999999999999999866 99999999999999999999999999999999999999999
Q ss_pred ec----------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhC
Q 022719 80 LT----------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFG 146 (293)
Q Consensus 80 ~T----------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya 146 (293)
+| |.||+++|+. .++|+|+++|++||.+|++||.+ +|+++++ ++.++.+|++.|.++||+|+++|+
T Consensus 84 ~t~i~HPnV~~~G~iCl~iL~~-~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya 162 (163)
T 3rcz_B 84 TPPLFHPNVYPSGTVCLSILNE-EEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENA 162 (163)
T ss_dssp SSCCCSTTBCTTSBBCCGGGCT-TTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred eCCCccCCCCCCCcEeccccCC-CCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99 9999999983 24699999999999999999965 5665544 456678999999999999999997
Q ss_pred C
Q 022719 147 T 147 (293)
Q Consensus 147 ~ 147 (293)
.
T Consensus 163 ~ 163 (163)
T 3rcz_B 163 P 163 (163)
T ss_dssp C
T ss_pred c
Confidence 4
No 18
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=3e-36 Score=267.52 Aligned_cols=138 Identities=30% Similarity=0.543 Sum_probs=126.7
Q ss_pred CChHHHHHHHHHHHHHhhC---CCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec---
Q 022719 8 LKNPAVKRILQEVKEMQSN---PSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT--- 81 (293)
Q Consensus 8 ms~~a~kRL~kElk~L~~~---p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T--- 81 (293)
||+.+.+||++|+++|+++ ++.||++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+|
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 81 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 81 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcc
Confidence 7788999999999999987 3689999999999999999999999999999999999999999999999999999
Q ss_pred --------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCCh
Q 022719 82 --------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTP 148 (293)
Q Consensus 82 --------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~~ 148 (293)
|.||+++|+ +.|+|+++|++||.+|++||.+ ||+++++ ++.+|.+|++.|.++||+|+++|+..
T Consensus 82 HPnv~~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 82 HPNISSVTGAICLDILK---DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp BTTBCTTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred cCCCcCCCCeeeCcccc---cCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 999999997 8999999999999999999965 7777765 46777899999999999999999865
No 19
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=2.3e-36 Score=258.13 Aligned_cols=135 Identities=28% Similarity=0.589 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec---------
Q 022719 11 PAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT--------- 81 (293)
Q Consensus 11 ~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T--------- 81 (293)
.+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 84 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDR 84 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCCh
Q 022719 82 -TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTP 148 (293)
Q Consensus 82 -G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~~ 148 (293)
|.|||++|+ +.|+|+++|++||.+|++||.+ +|+++++ ++.++.+|++.|.++||+|+++|+..
T Consensus 85 ~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 85 LGRICLDVLK---TNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp TCCBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred CCEEEchhhc---cCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 999999997 8999999999999999999955 6666665 45667799999999999999999864
No 20
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=4.8e-36 Score=257.69 Aligned_cols=140 Identities=24% Similarity=0.506 Sum_probs=126.4
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCeEEecCC-----CCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec
Q 022719 7 NLKNPAVKRILQEVKEMQSNPSDDFMSLPLE-----ENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT 81 (293)
Q Consensus 7 ~ms~~a~kRL~kElk~L~~~p~~gi~~~p~~-----~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T 81 (293)
+|++.+.+||++|+++|++++++||.+.|.. +|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 3 ~M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 82 (161)
T 2grr_A 3 HMSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEP 82 (161)
T ss_dssp -CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEec
Confidence 5888999999999999999999999998863 68999999999999999999999999999999999999999999
Q ss_pred ----------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCC
Q 022719 82 ----------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 147 (293)
Q Consensus 82 ----------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~ 147 (293)
|.||+++|+. .++|+|.++|++||.+|++||.+ +|+++++ |+.++.+|+++|.++||+|+++|+.
T Consensus 83 ~i~HPnv~~~G~iCl~iL~~-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 160 (161)
T 2grr_A 83 PLFHPNVYPSGTVCLSILEE-DKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 160 (161)
T ss_dssp CCCSTTBCTTSBBCCGGGCT-TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred CcccCCCCCCCeEeehhcCC-CCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhc
Confidence 9999999983 24899999999999999999954 5555544 4566779999999999999999985
No 21
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=1.4e-36 Score=257.65 Aligned_cols=133 Identities=27% Similarity=0.532 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEecCCC-CceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec---------
Q 022719 12 AVKRILQEVKEMQSNPSDDFMSLPLEE-NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT--------- 81 (293)
Q Consensus 12 a~kRL~kElk~L~~~p~~gi~~~p~~~-di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T--------- 81 (293)
+.+||++|+++|++++++||++.+.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|+|
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 469999999999999999999999887 9999999999999999999999999999999999999999999
Q ss_pred --ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCC
Q 022719 82 --TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 147 (293)
Q Consensus 82 --G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~ 147 (293)
|.|||++|+ ++|+|+++|++||.+|++||.+ +|+++++ ++.++.+|++.|.++||+|+++|+.
T Consensus 82 ~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 82 VTGAICLDILK---NAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SSCCBCCHHHH---TSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCeEeCCcCC---CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999997 8899999999999999999955 6666655 4667789999999999999999974
No 22
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=2.6e-36 Score=270.99 Aligned_cols=143 Identities=26% Similarity=0.557 Sum_probs=130.3
Q ss_pred CCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec----
Q 022719 6 YNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT---- 81 (293)
Q Consensus 6 ~~ms~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T---- 81 (293)
..+++.+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 18 ~~~~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~H 97 (216)
T 2pwq_A 18 YFQGSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWH 97 (216)
T ss_dssp -CCSCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred ccccCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcC
Confidence 4567789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCChhHH
Q 022719 82 -------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPERQ 151 (293)
Q Consensus 82 -------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~~~~~ 151 (293)
|.|||++|+ +.|+|+++|++||.+|++||.+ ||+++++ ++.+|.+|++.|.++||+|+++|+.....
T Consensus 98 PNI~~~~G~ICL~iL~---~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~~~~ 174 (216)
T 2pwq_A 98 PNISSQTGAICLDVLK---NEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATGPKE 174 (216)
T ss_dssp TTBCTTTCBBCCHHHH---HHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC--
T ss_pred CCCcCCCCEEEchhhc---ccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCCCcc
Confidence 999999998 7899999999999999999955 6776655 45677799999999999999999986543
No 23
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.1e-35 Score=262.86 Aligned_cols=135 Identities=28% Similarity=0.595 Sum_probs=126.2
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec--------
Q 022719 10 NPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT-------- 81 (293)
Q Consensus 10 ~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T-------- 81 (293)
+.+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~ 126 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNIN 126 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceEC
Confidence 568999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred --ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCC
Q 022719 82 --TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 147 (293)
Q Consensus 82 --G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~ 147 (293)
|.|||++|+ +.|+|.++|.+||.+|++||.+ ||+++++ ++.+|.+|++.|.++||+|+++|+.
T Consensus 127 ~~G~ICL~iL~---~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 127 SQGVICLDILK---DNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp TTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCceechhhh---ccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 999999997 8899999999999999999965 7776655 4667789999999999999999974
No 24
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=1.3e-35 Score=272.19 Aligned_cols=152 Identities=30% Similarity=0.537 Sum_probs=135.6
Q ss_pred CCCCChHHHHHHHHHHHHHhhC---CCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec
Q 022719 5 RYNLKNPAVKRILQEVKEMQSN---PSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT 81 (293)
Q Consensus 5 ~~~ms~~a~kRL~kElk~L~~~---p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T 81 (293)
..+|++.+.+||++|+++|+++ ++.||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 51 ~~~Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T 130 (253)
T 3e46_A 51 EFDMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFIT 130 (253)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred cccccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecC
Confidence 5789999999999999999987 4689999999999999999999999999999999999999999999999999998
Q ss_pred -----------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCC
Q 022719 82 -----------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 147 (293)
Q Consensus 82 -----------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~ 147 (293)
|.|||++|+ +.|+|.++|++||.+|++||.+ ||+++++ ++.+|.+|++.|.++||+|+++|+.
T Consensus 131 ~i~HPNV~~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~ 207 (253)
T 3e46_A 131 KIWHPNISSVTGAICLDILK---DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 207 (253)
T ss_dssp CCCBTTBCTTTCBBCCGGGT---TCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHC
T ss_pred CCccCCccCCCCeeeccccc---CCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 999999997 8999999999999999999965 7777765 4677789999999999999999986
Q ss_pred h-----hHHHHHHHHHH
Q 022719 148 P-----ERQKLIDEIHE 159 (293)
Q Consensus 148 ~-----~~~~l~~e~~~ 159 (293)
. .+++.++.+.+
T Consensus 208 ~~~~~~~~~~~v~~l~~ 224 (253)
T 3e46_A 208 APVSSPEYTKKIENLCA 224 (253)
T ss_dssp CSCCCHHHHHHHHHHHH
T ss_pred cccCcchHHHHHHHHHH
Confidence 5 34444444443
No 25
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9e-36 Score=260.50 Aligned_cols=139 Identities=25% Similarity=0.464 Sum_probs=124.7
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec-----
Q 022719 7 NLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----- 81 (293)
Q Consensus 7 ~ms~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T----- 81 (293)
+|+..+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 26 ~~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 105 (179)
T 1i7k_A 26 AARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHP 105 (179)
T ss_dssp ----CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred ccChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccC
Confidence 378889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -----ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCChh
Q 022719 82 -----TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPE 149 (293)
Q Consensus 82 -----G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~~~ 149 (293)
|.|||++|+ +.|+|.++|++||.+|++||.+ +|+++++ ++.+| +|+++|.++||++++++....
T Consensus 106 NV~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~~ 177 (179)
T 1i7k_A 106 NVDTQGNISLDILK---EKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTSQ 177 (179)
T ss_dssp TBCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC--
T ss_pred ccccCCeEEcccCc---CcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhccc
Confidence 999999997 8899999999999999999955 6666654 45677 999999999999999987643
No 26
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=4.9e-35 Score=252.54 Aligned_cols=142 Identities=18% Similarity=0.360 Sum_probs=127.5
Q ss_pred CCCCChHHHHHHHHHHHHHhhCCCCCeEEecC-CCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec--
Q 022719 5 RYNLKNPAVKRILQEVKEMQSNPSDDFMSLPL-EENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT-- 81 (293)
Q Consensus 5 ~~~ms~~a~kRL~kElk~L~~~p~~gi~~~p~-~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T-- 81 (293)
.-+..+.+.+||++|+++|++++++||++.+. ++|++.|+++| ||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 8 ~~~~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 86 (167)
T 3fn1_B 8 STRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKI 86 (167)
T ss_dssp CCCCCCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCC
T ss_pred CccchhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCc
Confidence 34566789999999999999999999999854 67899999999 899999999999999999999999999999999
Q ss_pred --------ccceeccCCCC---CCCCCCcccHHHHHHHHHHcCCC--CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhC
Q 022719 82 --------TKICLSISNHH---PEHWQPSWSVRTALVALIAFMPT--NPNGALG--SLDYKKEERRALAIKSREAAPKFG 146 (293)
Q Consensus 82 --------G~ICLsiL~~~---pe~W~P~~sI~~VL~~I~~lL~~--~P~~~l~--A~~~~~~dre~f~~kare~~~kya 146 (293)
|.||+++|+.+ +++|+|.++|++||.+|++||.+ ||+++++ |+.+|.+|++.|.++||+|+++|+
T Consensus 87 ~HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A 166 (167)
T 3fn1_B 87 WHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYA 166 (167)
T ss_dssp CCSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred ccCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhc
Confidence 99999999854 45899999999999999999976 5666655 466778999999999999999997
Q ss_pred C
Q 022719 147 T 147 (293)
Q Consensus 147 ~ 147 (293)
.
T Consensus 167 ~ 167 (167)
T 3fn1_B 167 R 167 (167)
T ss_dssp C
T ss_pred C
Confidence 4
No 27
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.7e-36 Score=258.68 Aligned_cols=139 Identities=17% Similarity=0.415 Sum_probs=126.4
Q ss_pred cCCCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec--
Q 022719 4 DRYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT-- 81 (293)
Q Consensus 4 ~~~~ms~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T-- 81 (293)
...+|++.+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 16 ~~~~M~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i 95 (169)
T 1yrv_A 16 PRGSMHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIP 95 (169)
T ss_dssp CTTGGGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCC
T ss_pred ccCccChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCC
Confidence 356899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ---------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhh
Q 022719 82 ---------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPK 144 (293)
Q Consensus 82 ---------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~k 144 (293)
|.||+++|+ +++.|+|+++|++||.+|++||.+ ||+++++ |+.+|.+|++.|.++ |+++++
T Consensus 96 ~HPNI~~~~G~ICL~iL~-~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 96 FHPNVDPHTGQPCIDFLD-NPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp CCTTBCTTTCCBCCHHHH-CGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred ccCcccCCCCeEeehhhc-CCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 999999997 347899999999999999999965 6666654 467778999999998 888764
No 28
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=7.4e-35 Score=248.62 Aligned_cols=135 Identities=26% Similarity=0.486 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEE-ecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec--------
Q 022719 11 PAVKRILQEVKEMQSNPSDDFMS-LPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT-------- 81 (293)
Q Consensus 11 ~a~kRL~kElk~L~~~p~~gi~~-~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T-------- 81 (293)
.+.+||++|+++|++++++||.+ .+.++|+++|+++|. |++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 36799999999999999999999 888999999999999 99999999999999999999999999999999
Q ss_pred --ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCCh
Q 022719 82 --TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTP 148 (293)
Q Consensus 82 --G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~~ 148 (293)
|.||+++|+ +++|+|+++|++||.+|++||.+ +|+++++ ++.++.+|++.|.++||+|+++|+..
T Consensus 83 ~~G~iCl~iL~--~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 152 (155)
T 1wzv_A 83 ENGQICLPIIS--SENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVD 152 (155)
T ss_dssp TTCBCCCGGGC--TTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEE
T ss_pred CCCeEeecCCC--ccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999993 28999999999999999999955 6666654 45677899999999999999999864
No 29
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=2e-34 Score=250.19 Aligned_cols=138 Identities=22% Similarity=0.414 Sum_probs=122.1
Q ss_pred CChHHHHHHHHHHHHHhh-C-C------CC---CeEEec-CCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCC
Q 022719 8 LKNPAVKRILQEVKEMQS-N-P------SD---DFMSLP-LEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPP 75 (293)
Q Consensus 8 ms~~a~kRL~kElk~L~~-~-p------~~---gi~~~p-~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP 75 (293)
|++.+.+||++|+++|++ + + +. ++.+.| .++|+++|+++|.||++|||+||+|+|+|.||++||++||
T Consensus 3 Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP 82 (172)
T 2y9m_A 3 MADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPP 82 (172)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCC
Confidence 899999999999999998 5 3 33 467788 7889999999999999999999999999999999999999
Q ss_pred eeeeec------------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHH-hHHHHHHHHH
Q 022719 76 SFMLLT------------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKE-ERRALAIKSR 139 (293)
Q Consensus 76 ~v~F~T------------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~-dre~f~~kar 139 (293)
+|+|+| |.|||++|+ ++.|+|+++|++||.+|++||.+ +|+++++ |+.++.+ |++.|.++||
T Consensus 83 ~v~f~t~~i~HPni~~~~G~iCl~iL~--~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~ 160 (172)
T 2y9m_A 83 KISFMQNNILHCNVKSATGEICLNILK--PEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVK 160 (172)
T ss_dssp EEEECTTSCCCTTEETTTTEECCGGGS--TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHH
T ss_pred EEEEeeCCeecCCCcCCCCEEeccccC--CCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHH
Confidence 999998 999999996 47899999999999999999955 6666654 4566677 9999999999
Q ss_pred HHHhhhCC
Q 022719 140 EAAPKFGT 147 (293)
Q Consensus 140 e~~~kya~ 147 (293)
+|++++..
T Consensus 161 ~~~~~~~~ 168 (172)
T 2y9m_A 161 YFLAERER 168 (172)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99998754
No 30
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=2.5e-34 Score=251.88 Aligned_cols=139 Identities=29% Similarity=0.586 Sum_probs=122.0
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEe-cCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec------
Q 022719 9 KNPAVKRILQEVKEMQSNPSDDFMSL-PLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT------ 81 (293)
Q Consensus 9 s~~a~kRL~kElk~L~~~p~~gi~~~-p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T------ 81 (293)
+..+.|||++|+++|++++++||++. ++++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+|
T Consensus 5 ~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 84 (183)
T 3rz3_A 5 SPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPN 84 (183)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCC
Confidence 46789999999999999999999998 77889999999999999999999999999999999999999999999
Q ss_pred ----ccceeccCCCC----------CCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHH------hHHHHHHHH
Q 022719 82 ----TKICLSISNHH----------PEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKE------ERRALAIKS 138 (293)
Q Consensus 82 ----G~ICLsiL~~~----------pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~------dre~f~~ka 138 (293)
|+||+++|+.+ .+.|+|+++|++||++|++||.+ ||+++++ |+.++.+ ++++|.+++
T Consensus 85 V~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~v 164 (183)
T 3rz3_A 85 IYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDII 164 (183)
T ss_dssp BCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHHHH
T ss_pred CCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHHHH
Confidence 99999999621 27899999999999999999965 6666654 4455556 678999999
Q ss_pred HHHHhhhCC
Q 022719 139 REAAPKFGT 147 (293)
Q Consensus 139 re~~~kya~ 147 (293)
|+++.++..
T Consensus 165 ~~~v~~s~~ 173 (183)
T 3rz3_A 165 RKQVLGTKV 173 (183)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988753
No 31
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=2.6e-34 Score=249.59 Aligned_cols=134 Identities=25% Similarity=0.606 Sum_probs=100.4
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCC-CCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec-----
Q 022719 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLE-ENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----- 81 (293)
Q Consensus 8 ms~~a~kRL~kElk~L~~~p~~gi~~~p~~-~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T----- 81 (293)
.+..+.+||++|+++|++++++||++.|.+ +|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 14 ~~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HP 93 (172)
T 2awf_A 14 LVPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHP 93 (172)
T ss_dssp CCCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCT
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccC
Confidence 456789999999999999999999999875 79999999999999999999999999999999999999999999
Q ss_pred -----ccceeccCCC----------CCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHH-HHHHHHHHH
Q 022719 82 -----TKICLSISNH----------HPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERR-ALAIKSREA 141 (293)
Q Consensus 82 -----G~ICLsiL~~----------~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre-~f~~kare~ 141 (293)
|+||+++|+. +.+.|+|+++|++||.+|++||.+ ||+++++ |+.+|.+|++ +|.++||+|
T Consensus 94 NV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 94 NVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp TBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred CCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 9999999973 136899999999999999999965 6666665 4677789999 999999875
No 32
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=1.1e-34 Score=260.29 Aligned_cols=136 Identities=26% Similarity=0.518 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEecCCC-CceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec--------
Q 022719 11 PAVKRILQEVKEMQSNPSDDFMSLPLEE-NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT-------- 81 (293)
Q Consensus 11 ~a~kRL~kElk~L~~~p~~gi~~~p~~~-di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T-------- 81 (293)
.+.+||++|+++|++++++||++.|.++ ++++|+++|.||++|||+||+|+++|.||++||++||+|+|+|
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 3679999999999999999999999876 5669999999999999999999999999999999999999999
Q ss_pred ---ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCChh
Q 022719 82 ---TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPE 149 (293)
Q Consensus 82 ---G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~~~ 149 (293)
|.|||++|+ +.|+|+++|++||.+|++||.+ +|+++++ ++.+|.+|++.|.++||+|+++|+...
T Consensus 82 ~~~G~ICL~iL~---~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~~ 152 (215)
T 1tte_A 82 SVTGAICLDILR---NAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASET 152 (215)
T ss_dssp SSSSCCCSSTTT---CCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCCC
T ss_pred CCCCEEECccCC---CCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccCC
Confidence 999999998 8899999999999999999965 6666655 356777999999999999999999653
No 33
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.1e-34 Score=249.98 Aligned_cols=149 Identities=39% Similarity=0.775 Sum_probs=116.7
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec-----
Q 022719 7 NLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----- 81 (293)
Q Consensus 7 ~ms~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T----- 81 (293)
+.++.+.+||++|+++|++++++||.+.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 10 ~~~~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~~~~~ 89 (187)
T 2f4w_A 10 RAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRF 89 (187)
T ss_dssp ----CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCSSB
T ss_pred CCccHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCCCcee
Confidence 667789999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ---ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHHHHHHHHHhHHHHHHHHHHHHhhhCChhHHHHHHHH
Q 022719 82 ---TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALGSLDYKKEERRALAIKSREAAPKFGTPERQKLIDEI 157 (293)
Q Consensus 82 ---G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~A~~~~~~dre~f~~kare~~~kya~~~~~~l~~e~ 157 (293)
|+|||++|+.|++.|+|.++|.+||.+|++||.+ +|+ .++......+++.|++.++.|..+. +.+.++..++
T Consensus 90 ~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~--~g~~~~~~~~r~~~a~~s~~~~~~~--~~f~~~fp~~ 165 (187)
T 2f4w_A 90 KCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPT--LGSIETSDFTKRQLAVQSLAFNLKD--KVFCELFPEV 165 (187)
T ss_dssp CTTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCC--TTBCCCCHHHHHHHHHHHHHHHHTC--HHHHHHCHHH
T ss_pred ccCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCC--CcccccChHHHHHHHHHHHHHhhcC--chHHHhhHHH
Confidence 9999999987778999999999999999999944 544 3333334567889999999998765 4444444444
Q ss_pred HH
Q 022719 158 HE 159 (293)
Q Consensus 158 ~~ 159 (293)
.+
T Consensus 166 ~~ 167 (187)
T 2f4w_A 166 VE 167 (187)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 34
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=2e-34 Score=245.70 Aligned_cols=133 Identities=20% Similarity=0.461 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec----------
Q 022719 12 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT---------- 81 (293)
Q Consensus 12 a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T---------- 81 (293)
+.+||++|+++|+++ |+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+|
T Consensus 3 a~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~ 79 (152)
T 2onu_A 3 SLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEA 79 (152)
T ss_dssp CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCc
Confidence 568999999999884 7888899999999999999999999999999999999999999999999998
Q ss_pred -ccceeccCCCCCCCCCCcccHHHHHHH-HHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCChhH
Q 022719 82 -TKICLSISNHHPEHWQPSWSVRTALVA-LIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPER 150 (293)
Q Consensus 82 -G~ICLsiL~~~pe~W~P~~sI~~VL~~-I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~~~~ 150 (293)
|.||+++|+ +.|+|+++|++||.+ |++||.+ ||+++++ |+.++.+|++.|.++||+|+++|+....
T Consensus 80 ~G~iCl~il~---~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~~~ 150 (152)
T 2onu_A 80 SGSVCLDVIN---QTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASKDL 150 (152)
T ss_dssp TCBBCHHHHH---HHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCGGG
T ss_pred CCeEeccccc---ccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccCcc
Confidence 999999997 789999999999999 6788854 6666554 4567789999999999999999998653
No 35
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=4.2e-34 Score=243.73 Aligned_cols=135 Identities=27% Similarity=0.598 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEe-cCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec---------
Q 022719 12 AVKRILQEVKEMQSNPSDDFMSL-PLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT--------- 81 (293)
Q Consensus 12 a~kRL~kElk~L~~~p~~gi~~~-p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T--------- 81 (293)
+.+||++|+++|++++++|+.+. +.++|+++|+++|. |++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 81 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE 81 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC
Confidence 56899999999999999999855 46789999999998 99999999999999999999999999999999
Q ss_pred -ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCChh
Q 022719 82 -TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPE 149 (293)
Q Consensus 82 -G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~~~ 149 (293)
|.||+++|+ +++|+|+++|++||.+|++||.+ +|+++++ ++.++.+|++.|.++||+|+++|+...
T Consensus 82 ~G~iCl~iL~--~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~~ 151 (154)
T 1c4z_D 82 KGQVCLPVIS--AENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEKR 151 (154)
T ss_dssp TCBBCCTTTS--SSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC----
T ss_pred CCEEECCCCC--CCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhcccC
Confidence 999999996 37899999999999999999954 6666554 456677999999999999999999743
No 36
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.5e-33 Score=239.84 Aligned_cols=130 Identities=19% Similarity=0.411 Sum_probs=118.0
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEe-cCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec------
Q 022719 9 KNPAVKRILQEVKEMQSNPSDDFMSL-PLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT------ 81 (293)
Q Consensus 9 s~~a~kRL~kElk~L~~~p~~gi~~~-p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T------ 81 (293)
++.+.+||++|+++| ++++|+++. |+++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|+|
T Consensus 4 ~~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (160)
T 1y8x_A 4 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPN 80 (160)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCc
Confidence 457899999999999 577899997 8899999999998 999999999999999999999999999999999
Q ss_pred ----ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhh
Q 022719 82 ----TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPK 144 (293)
Q Consensus 82 ----G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~k 144 (293)
|.|||++|+ +.|+|+++|++||.+|++||.+ +|+++++ ++.++.+|++.|.++||+|++.
T Consensus 81 v~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 81 IDLEGNVCLNILR---EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp BCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred CCCCCeEEcccch---hhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 999999998 7899999999999999999955 6666544 4566779999999999999874
No 37
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.5e-34 Score=249.20 Aligned_cols=138 Identities=24% Similarity=0.475 Sum_probs=120.2
Q ss_pred CCCCh--HHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec--
Q 022719 6 YNLKN--PAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT-- 81 (293)
Q Consensus 6 ~~ms~--~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T-- 81 (293)
..|++ .+.+||++|+++|+. .|+++.+. +|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 18 ~~ms~~~~a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i 93 (179)
T 2z5d_A 18 GSMSSPSPGKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKI 93 (179)
T ss_dssp -----CCHHHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred ccCCCchHHHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCC
Confidence 35655 589999999999985 57888887 67999999999999999999999999999999999999999999
Q ss_pred ---------ccceeccCCCCCCCCCCcccHHHHHHH-HHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCCh
Q 022719 82 ---------TKICLSISNHHPEHWQPSWSVRTALVA-LIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTP 148 (293)
Q Consensus 82 ---------G~ICLsiL~~~pe~W~P~~sI~~VL~~-I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~~ 148 (293)
|.||+++|+ +.|+|+++|++||.+ |++||.+ ||+++++ ++.+|.+|+++|.++||+|+++|+..
T Consensus 94 ~HPNV~~~~G~ICL~iL~---~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~~ 170 (179)
T 2z5d_A 94 FHPNIDEASGTVCLDVIN---QTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATE 170 (179)
T ss_dssp CBTTBCTTTCBBCHHHHH---HHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSSH
T ss_pred ccCcCCCCCCeEeccccc---cCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 999999998 789999999999999 9999954 6666554 45677899999999999999999986
Q ss_pred hH
Q 022719 149 ER 150 (293)
Q Consensus 149 ~~ 150 (293)
..
T Consensus 171 ~~ 172 (179)
T 2z5d_A 171 EA 172 (179)
T ss_dssp HH
T ss_pred ch
Confidence 53
No 38
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.3e-33 Score=243.06 Aligned_cols=134 Identities=18% Similarity=0.363 Sum_probs=121.4
Q ss_pred CCCCChHHHHHHHHHHHHHhhCCCCCeEEe-cCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec--
Q 022719 5 RYNLKNPAVKRILQEVKEMQSNPSDDFMSL-PLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT-- 81 (293)
Q Consensus 5 ~~~ms~~a~kRL~kElk~L~~~p~~gi~~~-p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T-- 81 (293)
..++++.+.+||++|+++| ++++|+++. |.++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|+|
T Consensus 20 ~~~~~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i 96 (180)
T 2nvu_C 20 SSKKASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMV 96 (180)
T ss_dssp CCCSCCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCC
T ss_pred ccCCccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccC
Confidence 3567788999999999999 578899997 8899999999998 999999999999999999999999999999999
Q ss_pred --------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhh
Q 022719 82 --------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPK 144 (293)
Q Consensus 82 --------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~k 144 (293)
|.||+++|+ ++|+|+++|++||.+|++||.+ ||+++++ ++.+|.+|++.|.++||+|++.
T Consensus 97 ~HPNV~~~G~iCl~iL~---~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~ 167 (180)
T 2nvu_C 97 YHPNIDLEGNVALNILR---EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 167 (180)
T ss_dssp CBTTBCTTSBBCCGGGT---TSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred ccCCCCCCCcEEccccc---ccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 999999998 7899999999999999999955 6666554 4667779999999999999875
No 39
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=1.4e-32 Score=266.47 Aligned_cols=137 Identities=28% Similarity=0.613 Sum_probs=128.2
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec--------
Q 022719 10 NPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT-------- 81 (293)
Q Consensus 10 ~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T-------- 81 (293)
+.+.|||++|+++|++++++|+++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+|
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 81 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN 81 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccC
Confidence 468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred --ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCChh
Q 022719 82 --TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPE 149 (293)
Q Consensus 82 --G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~~~ 149 (293)
|.||+++|+ +.|+|+++|++||.+|++||.+ ||+++++ ++.++.+|++.|.++||+|+++|+...
T Consensus 82 ~~G~iCl~il~---~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~~ 151 (399)
T 4ddg_A 82 SNGSISLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMGG 151 (399)
T ss_dssp TTCBBCCGGGT---TSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSCT
T ss_pred CCCeEeCcccc---cCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhccc
Confidence 999999997 8999999999999999999965 7777765 467778999999999999999998654
No 40
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=99.98 E-value=4.9e-33 Score=241.48 Aligned_cols=132 Identities=22% Similarity=0.468 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec---------
Q 022719 11 PAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT--------- 81 (293)
Q Consensus 11 ~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T--------- 81 (293)
.+.+||++|+++|++++. ++ +.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~ 87 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDE 87 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcc
Confidence 467999999999999874 44 35789999999999999999999999999999999999999999998
Q ss_pred --ccceeccCCCCCCCCCCcccHHHHHHHH-HHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhhCChh
Q 022719 82 --TKICLSISNHHPEHWQPSWSVRTALVAL-IAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPE 149 (293)
Q Consensus 82 --G~ICLsiL~~~pe~W~P~~sI~~VL~~I-~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~kya~~~ 149 (293)
|.||+++|+ +.|+|+++|++||.+| ++||.+ +|+++++ ++.++.+|++.|.++||+|+++|+...
T Consensus 88 ~~G~iCl~iL~---~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~~~ 158 (171)
T 1yf9_A 88 RSGSVCLDVIN---QTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATPQ 158 (171)
T ss_dssp TTCBBCHHHHH---HHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCCHH
T ss_pred cCCeEeccccc---cCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcChh
Confidence 999999997 7899999999999997 688854 5555544 456677999999999999999999864
No 41
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.98 E-value=2.7e-32 Score=225.30 Aligned_cols=106 Identities=29% Similarity=0.561 Sum_probs=95.6
Q ss_pred CCCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec---
Q 022719 5 RYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT--- 81 (293)
Q Consensus 5 ~~~ms~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T--- 81 (293)
+|||+. +.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+|
T Consensus 1 ~~~m~~-a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 79 (125)
T 2fo3_A 1 KYNMGN-ANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPP 79 (125)
T ss_dssp ---------CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCC
T ss_pred CCCchH-HHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCC
Confidence 578864 7899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred --------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCC
Q 022719 82 --------TKICLSISNHHPEHWQPSWSVRTALVALIAFMP 114 (293)
Q Consensus 82 --------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~ 114 (293)
|+||+++|+ ++|+|+++|++||.+|++||.
T Consensus 80 ~HPnv~~~G~iCl~iL~---~~W~P~~~i~~vl~si~~ll~ 117 (125)
T 2fo3_A 80 KHTHVYSNGDICLSLLG---DDYNPSLSISGLVLSIISMLS 117 (125)
T ss_dssp CBTTBCTTSBBCCGGGT---TTCCTTCCHHHHHHHHHHHHC
T ss_pred CCCcCCCCCEEEchhcC---CCCCCCCcHHHHHHHHHHHHh
Confidence 999999997 889999999999999999994
No 42
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.97 E-value=4.6e-32 Score=238.97 Aligned_cols=135 Identities=19% Similarity=0.342 Sum_probs=122.4
Q ss_pred CCCChHHHHHHHHHHHHHhhCCCCCeEEe----cCCCCce---EEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeee
Q 022719 6 YNLKNPAVKRILQEVKEMQSNPSDDFMSL----PLEENIF---EWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFM 78 (293)
Q Consensus 6 ~~ms~~a~kRL~kElk~L~~~p~~gi~~~----p~~~di~---~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~ 78 (293)
.+.++.+.+||++|+++|+ +++|+++. |+++|++ +|+++|. |++|||+||+|+++|.||++||++||+|+
T Consensus 24 ~~~~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~ 100 (190)
T 3o2u_A 24 QPNLSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVV 100 (190)
T ss_dssp SCCCCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEE
T ss_pred CCCccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeE
Confidence 4566789999999999998 67899987 8999999 9999997 88899999999999999999999999999
Q ss_pred eec----------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH--HHHHHHHhHHHHHHHHHHHHhhh
Q 022719 79 LLT----------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKF 145 (293)
Q Consensus 79 F~T----------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~--A~~~~~~dre~f~~kare~~~ky 145 (293)
|+| |.||+++|+ ++|+|.++|++||.+|++||.+ ||+++++ |+.+|.+|++.|.++||+|++.+
T Consensus 101 f~t~i~HPnV~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~ 177 (190)
T 3o2u_A 101 CLKKIFHPNIDLKGNVCLNILR---EDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGG 177 (190)
T ss_dssp ECSCCCCTTBCTTSBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTC
T ss_pred EecCcccCCCCCCCeEechhcc---CCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhc
Confidence 999 999999998 8999999999999999999965 7777665 46677799999999999999765
Q ss_pred C
Q 022719 146 G 146 (293)
Q Consensus 146 a 146 (293)
.
T Consensus 178 ~ 178 (190)
T 3o2u_A 178 S 178 (190)
T ss_dssp E
T ss_pred C
Confidence 3
No 43
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=99.97 E-value=1.6e-31 Score=223.79 Aligned_cols=110 Identities=29% Similarity=0.550 Sum_probs=102.9
Q ss_pred cCCCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec--
Q 022719 4 DRYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT-- 81 (293)
Q Consensus 4 ~~~~ms~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T-- 81 (293)
.+++|+. +.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+|
T Consensus 14 ~~~~~~~-~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i 92 (136)
T 2h2y_A 14 TKYNLGN-ANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKP 92 (136)
T ss_dssp SCCCTTS-HHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSC
T ss_pred hhccchH-HHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCC
Confidence 4567764 7899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ---------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCCCCC
Q 022719 82 ---------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 118 (293)
Q Consensus 82 ---------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~~P~ 118 (293)
|+||+++|+ ++|+|+++|++||.+|++|| .+|+
T Consensus 93 ~~HPnv~~~G~ICl~iL~---~~WsP~~ti~~vL~si~sll-~~p~ 134 (136)
T 2h2y_A 93 PKHTHVYSNGDICLSVLG---DDYNPSLSISGLILSIISML-SSAK 134 (136)
T ss_dssp CCCTTBCTTCCBCCGGGT---TTCCTTCCHHHHHHHHHHHH-SSSC
T ss_pred CCCCcCCCCCEEECcccc---CCCCCCCcHHHHHHHHHHHH-hCcC
Confidence 999999997 88999999999999999999 4443
No 44
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.97 E-value=9.2e-32 Score=232.29 Aligned_cols=131 Identities=20% Similarity=0.449 Sum_probs=115.7
Q ss_pred CCCChHHHHHHHHHHHHHhhCC------------CCCeEEecCCCCceEEEEEEeCCCCCCCC--CCeEEEEeeCCCCCC
Q 022719 6 YNLKNPAVKRILQEVKEMQSNP------------SDDFMSLPLEENIFEWQFAIRGPGDTEFE--GGIYHGRIQLPAEYP 71 (293)
Q Consensus 6 ~~ms~~a~kRL~kElk~L~~~p------------~~gi~~~p~~~di~~W~~~I~GP~~TpYe--GG~F~~~I~fP~dYP 71 (293)
..||+.+.+||++|+++|++++ +.|+++.+.++|+++|+++|.||++|||+ ||+|+|+|.||++||
T Consensus 3 ~~Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP 82 (167)
T 4ds2_A 3 GSMKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYP 82 (167)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTT
T ss_pred ccccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCC
Confidence 4688889999999999999987 78999999999999999999999999999 999999999999999
Q ss_pred CCCCeeeeec----------ccceeccCCCCCCCCCCcccHHHHHH-HHHHcCCC---CCCChHH--HHHHHHHhHHHHH
Q 022719 72 FKPPSFMLLT----------TKICLSISNHHPEHWQPSWSVRTALV-ALIAFMPT---NPNGALG--SLDYKKEERRALA 135 (293)
Q Consensus 72 ~~PP~v~F~T----------G~ICLsiL~~~pe~W~P~~sI~~VL~-~I~~lL~~---~P~~~l~--A~~~~~~dre~f~ 135 (293)
++||+|+|+| |.||+++|+ ++|+|+++|+++|+ .|++|+.. ||+++++ |+.++.+|+++|.
T Consensus 83 ~~pP~v~f~t~i~HPnv~~~G~iCl~il~---~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~ 159 (167)
T 4ds2_A 83 HEPPTVRFVTPVYSPLVTGEGGICDRMVN---DFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFA 159 (167)
T ss_dssp TSCCEEEESSCCCCSSCCTTSCCCTHHHH---TTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHH
T ss_pred CCCCEEEEeCCcccccCCCCCEEEcccCc---CCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHH
Confidence 9999999999 999999997 89999999999754 56666642 5566654 5677789999999
Q ss_pred HHHH
Q 022719 136 IKSR 139 (293)
Q Consensus 136 ~kar 139 (293)
++||
T Consensus 160 ~~vr 163 (167)
T 4ds2_A 160 ARVR 163 (167)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9987
No 45
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.97 E-value=1.2e-30 Score=246.09 Aligned_cols=144 Identities=25% Similarity=0.355 Sum_probs=126.4
Q ss_pred CCCCChHHHHHHHHHHHHHhhCCCCC----eEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeee
Q 022719 5 RYNLKNPAVKRILQEVKEMQSNPSDD----FMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLL 80 (293)
Q Consensus 5 ~~~ms~~a~kRL~kElk~L~~~p~~g----i~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~ 80 (293)
.-+||..+.+||++|+++|++++++| +++.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|+
T Consensus 70 ~~~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~ 149 (323)
T 3ceg_A 70 NDANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLE 149 (323)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEe
Confidence 34689999999999999999988774 55778899999999999999999999999999999999999999999998
Q ss_pred c---------------ccceeccCCCC----CCCCCCcc-cHHHHHHHHHHcCC-CCC--CChHHH----HHHHHHhHHH
Q 022719 81 T---------------TKICLSISNHH----PEHWQPSW-SVRTALVALIAFMP-TNP--NGALGS----LDYKKEERRA 133 (293)
Q Consensus 81 T---------------G~ICLsiL~~~----pe~W~P~~-sI~~VL~~I~~lL~-~~P--~~~l~A----~~~~~~dre~ 133 (293)
| |+|||++|+.+ ++.|+|++ +|++||++|++||. .+| +++++. ..++.+|++.
T Consensus 150 T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~ 229 (323)
T 3ceg_A 150 TTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSRE 229 (323)
T ss_dssp CSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHH
T ss_pred ccCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHH
Confidence 7 89999999743 26899999 89999999999995 344 555542 4677899999
Q ss_pred HHHHHHHHHhhhCCh
Q 022719 134 LAIKSREAAPKFGTP 148 (293)
Q Consensus 134 f~~kare~~~kya~~ 148 (293)
|.+++|+|+++|+..
T Consensus 230 Y~~~vr~~t~k~A~~ 244 (323)
T 3ceg_A 230 YDGNIRQATVKWAML 244 (323)
T ss_dssp HHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHhhH
Confidence 999999999999864
No 46
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=7.3e-31 Score=220.07 Aligned_cols=105 Identities=27% Similarity=0.583 Sum_probs=98.7
Q ss_pred CCCCChHHHHHHHHHHHHHhhCCCCCeEEe--cCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec-
Q 022719 5 RYNLKNPAVKRILQEVKEMQSNPSDDFMSL--PLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT- 81 (293)
Q Consensus 5 ~~~ms~~a~kRL~kElk~L~~~p~~gi~~~--p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T- 81 (293)
..+|++.+ +||++|+++|++++++||++. +.++|+++|+++|.||+|||||||+|+++|.||++||++||+|+|+|
T Consensus 17 ~~~Ms~~~-~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~ 95 (136)
T 2a7l_A 17 RGSMASMQ-KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGE 95 (136)
T ss_dssp GGGGTTSC-HHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESS
T ss_pred chhccHHH-HHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCC
Confidence 45677644 999999999999999999865 88999999999999999999999999999999999999999999998
Q ss_pred -----------ccceeccCCCCCCCCCCcccHHHHHHHHHHcC
Q 022719 82 -----------TKICLSISNHHPEHWQPSWSVRTALVALIAFM 113 (293)
Q Consensus 82 -----------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL 113 (293)
|+||+++|+ ++|+|+++|++||.+|++||
T Consensus 96 i~~~HPNV~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~slL 135 (136)
T 2a7l_A 96 NIPVHPHVYSNGHICLSILT---EDWSPALSVQSVCLSIISML 135 (136)
T ss_dssp CCCCBTTBCTTCBBCCGGGT---TTCCTTSCHHHHHHHHHHHT
T ss_pred CcCCCccCCCCCeEEchhcC---CCCCCCCcHHHHHHHHHHHh
Confidence 899999998 89999999999999999998
No 47
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.96 E-value=1.8e-29 Score=217.02 Aligned_cols=115 Identities=27% Similarity=0.353 Sum_probs=101.5
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCC-eEEec-CCCC--ceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec-
Q 022719 7 NLKNPAVKRILQEVKEMQSNPSDD-FMSLP-LEEN--IFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT- 81 (293)
Q Consensus 7 ~ms~~a~kRL~kElk~L~~~p~~g-i~~~p-~~~d--i~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T- 81 (293)
.+..++.+||++|+++|++++++| +.+.+ +++| +++|+++|.||++||||||+|+++|.||++||++||+|+|+|
T Consensus 21 ~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~ 100 (160)
T 2a4d_A 21 GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTK 100 (160)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred eeechHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecC
Confidence 456789999999999999999888 67776 4554 999999999999999999999999999999999999999999
Q ss_pred ----------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC--CCCChHH
Q 022719 82 ----------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT--NPNGALG 122 (293)
Q Consensus 82 ----------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~--~P~~~l~ 122 (293)
|+||+++|+.+ +.|+|+++|++||.+|++||.+ |++++++
T Consensus 101 i~HPNV~~~~G~ICl~iL~~~-~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n 152 (160)
T 2a4d_A 101 INMNGVNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLMMSKENMKLPQP 152 (160)
T ss_dssp CCCTTBCTTTCBBCGGGSHHH-HTCCTTCCHHHHHHHHHHHHTSTTTTTCCCC
T ss_pred ceeCCEECCCCEEehhhcCCc-cCCCccCcHHHHHHHHHHHHccCCCCCCCCC
Confidence 99999999633 5799999999999999999954 5555544
No 48
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.96 E-value=1.9e-29 Score=215.97 Aligned_cols=112 Identities=24% Similarity=0.333 Sum_probs=100.0
Q ss_pred CCChHHHHHHHHHHHHHhhC-CCCCeEEecCC-C--CceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec-
Q 022719 7 NLKNPAVKRILQEVKEMQSN-PSDDFMSLPLE-E--NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT- 81 (293)
Q Consensus 7 ~ms~~a~kRL~kElk~L~~~-p~~gi~~~p~~-~--di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T- 81 (293)
..+.++.+||++|+++|+++ +++|+++.+.. + |+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|
T Consensus 17 ~~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~ 96 (156)
T 2q0v_A 17 QGIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTK 96 (156)
T ss_dssp SSCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcc
Confidence 45567899999999999998 78899998853 3 5999999999999999999999999999999999999999999
Q ss_pred ---------ccc---eeccCCCCCCCCCCcccHHHHHHHHHHcCCC-CCCChHH
Q 022719 82 ---------TKI---CLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG 122 (293)
Q Consensus 82 ---------G~I---CLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~-~P~~~l~ 122 (293)
|+| ||++|+ .|+|+++|++||.+|++||.+ +|+++++
T Consensus 97 i~HPNV~~~G~icisCL~iL~----~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n 146 (156)
T 2q0v_A 97 IEMSCVDNCGRVIKNNLHILK----NWNRNYTIETILISLRQEMLSSANKRLPQ 146 (156)
T ss_dssp CCCTTBCTTSBBCGGGSHHHH----TCCTTCCHHHHHHHHHHHTTSTTTTTCCC
T ss_pred cccCCCccCCeEehhhccccc----CCCCcCcHHHHHHHHHHHHhCCCCCCcCC
Confidence 999 899996 499999999999999999955 5555443
No 49
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.95 E-value=6.1e-30 Score=224.80 Aligned_cols=110 Identities=12% Similarity=0.404 Sum_probs=100.4
Q ss_pred cCCCCChHHHHHHHHHHHHHhhCC---CCCeEEecCCCCceEEEEEEeCC-CCCCCCC-----------CeEEEEeeCCC
Q 022719 4 DRYNLKNPAVKRILQEVKEMQSNP---SDDFMSLPLEENIFEWQFAIRGP-GDTEFEG-----------GIYHGRIQLPA 68 (293)
Q Consensus 4 ~~~~ms~~a~kRL~kElk~L~~~p---~~gi~~~p~~~di~~W~~~I~GP-~~TpYeG-----------G~F~~~I~fP~ 68 (293)
....|+..+.+||++|+++|++++ +.||.+.|.++|+++|+++|.|| ++|||+| |+|+|+|.||+
T Consensus 20 g~~~~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~ 99 (186)
T 1zuo_A 20 GAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKD 99 (186)
T ss_dssp ----CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCT
T ss_pred CcccccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCC
Confidence 467899999999999999999998 68899999999999999999998 9999998 89999999999
Q ss_pred CCCCCCCeeeeec-----------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC
Q 022719 69 EYPFKPPSFMLLT-----------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT 115 (293)
Q Consensus 69 dYP~~PP~v~F~T-----------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~ 115 (293)
+||++||+|+|.| |.|||++|+ ++.|+|+++|++||.+|++||.+
T Consensus 100 ~YP~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~--~~~WsP~~ti~~VL~sI~slL~~ 155 (186)
T 1zuo_A 100 NFPFDPPFVRVVLPVLSGGYVLGGGALCMELLT--KQGWSSAYSIESVIMQINATLVK 155 (186)
T ss_dssp TTTSSCCEEEEEESCEESTTBCGGGBBCCGGGS--TTTCCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCeEEEeCCccCCCccCCCCcEEeccCC--CCCCCCcCcHHHHHHHHHHHHcC
Confidence 9999999999998 899999996 37899999999999999999944
No 50
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.95 E-value=4.5e-29 Score=209.25 Aligned_cols=102 Identities=22% Similarity=0.404 Sum_probs=91.7
Q ss_pred hHHHHHHHHHHHHHhhC-CCCCeEEecCC-C--CceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec----
Q 022719 10 NPAVKRILQEVKEMQSN-PSDDFMSLPLE-E--NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT---- 81 (293)
Q Consensus 10 ~~a~kRL~kElk~L~~~-p~~gi~~~p~~-~--di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T---- 81 (293)
.++.+||++|+++|+++ ++.|+.+.+.. + |+++|+++|.||++|||+||+|+++|.||++||++||+|+|+|
T Consensus 5 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 84 (138)
T 1jat_B 5 VPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINL 84 (138)
T ss_dssp CCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEccccc
Confidence 36779999999999998 78899998853 3 5999999999999999999999999999999999999999999
Q ss_pred -------ccc--eeccCCCCCCCCCCcccHHHHHHHHHHcCCC
Q 022719 82 -------TKI--CLSISNHHPEHWQPSWSVRTALVALIAFMPT 115 (293)
Q Consensus 82 -------G~I--CLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~ 115 (293)
|.| ||++|+ +|+|+++|++||.+|++||.+
T Consensus 85 Pnv~~~~G~i~~cL~~l~----~W~p~~~i~~vl~~i~~ll~~ 123 (138)
T 1jat_B 85 PCVNPTTGEVQTDFHTLR----DWKRAYTMETLLLDLRKEMAT 123 (138)
T ss_dssp TTBCTTTCBBCTTSHHHH----TCCTTCCHHHHHHHHHHHHTS
T ss_pred CCEeCCCCEEeeecccCC----CCCCcCcHHHHHHHHHHHHcC
Confidence 899 999984 699999999999999999965
No 51
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.95 E-value=5e-29 Score=216.15 Aligned_cols=113 Identities=27% Similarity=0.353 Sum_probs=99.4
Q ss_pred ChHHHHHHHHHHHHHhhCCCCC-eEEec-CCCC--ceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeec---
Q 022719 9 KNPAVKRILQEVKEMQSNPSDD-FMSLP-LEEN--IFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT--- 81 (293)
Q Consensus 9 s~~a~kRL~kElk~L~~~p~~g-i~~~p-~~~d--i~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~T--- 81 (293)
..++.+||++|+++|++++++| +.+.+ +++| +++|+++|.||++|||+||+|+++|.||++||++||+|+|+|
T Consensus 33 ~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 112 (170)
T 2hlw_A 33 KVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKIN 112 (170)
T ss_dssp CCCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCC
T ss_pred cCHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccc
Confidence 3568999999999999999888 66766 4554 999999999999999999999999999999999999999999
Q ss_pred --------ccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC--CCCChHH
Q 022719 82 --------TKICLSISNHHPEHWQPSWSVRTALVALIAFMPT--NPNGALG 122 (293)
Q Consensus 82 --------G~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~--~P~~~l~ 122 (293)
|.||+++|+.+ +.|+|+++|++||.+|++||.+ |++++++
T Consensus 113 HPNV~~~~G~ICl~iL~~~-~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n 162 (170)
T 2hlw_A 113 MNGVNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLMMSKENMKLPQP 162 (170)
T ss_dssp CSSBCSSSCBBCTTTCHHH-HTCCSSCCHHHHHHHHHHHHHSTTTSSSCCC
T ss_pred cCCEeCCCCEEEhhhcCCC-CCCCccCcHHHHHHHHHHHHccCCCCCCCCC
Confidence 99999999643 6799999999999999999954 5455443
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.79 E-value=5e-21 Score=164.32 Aligned_cols=87 Identities=17% Similarity=0.290 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCC----------eEEEEeeCCCCCCCCCCeeeeec-
Q 022719 13 VKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGG----------IYHGRIQLPAEYPFKPPSFMLLT- 81 (293)
Q Consensus 13 ~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG----------~F~~~I~fP~dYP~~PP~v~F~T- 81 (293)
.+||++|++.|++ ++.+..+|++.|+++|.||.||+|+|| .|+++|.||++||++||+|+|.+
T Consensus 34 ~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~ 107 (172)
T 2z6o_A 34 VQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPEL 107 (172)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCC
Confidence 9999999999999 477888999999999999999999999 99999999999999999999966
Q ss_pred ----------ccceeccCCCCCC---CCCCcccHHHHHH
Q 022719 82 ----------TKICLSISNHHPE---HWQPSWSVRTALV 107 (293)
Q Consensus 82 ----------G~ICLsiL~~~pe---~W~P~~sI~~VL~ 107 (293)
|+|||++|.. . .|+|.++|.++|.
T Consensus 108 ~~~hpnmY~~G~ICLdIL~k--p~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 108 DGKTAKMYRGGKICLTDHFK--PLWARNVPKFGLAHLMA 144 (172)
T ss_dssp TTTCSSBCTTSBBCCCTTHH--HHHHHHTTSCCHHHHHH
T ss_pred CCCCCCCCCCCcEechhhcc--ccccccCCccCHHHHHh
Confidence 9999999941 3 3559999999984
No 53
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.37 E-value=4.7e-14 Score=118.93 Aligned_cols=80 Identities=21% Similarity=0.441 Sum_probs=68.3
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCC----------eEEEEeeCCCCCCCCCCeeee
Q 022719 10 NPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGG----------IYHGRIQLPAEYPFKPPSFML 79 (293)
Q Consensus 10 ~~a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG----------~F~~~I~fP~dYP~~PP~v~F 79 (293)
..=..||..||..|-+ ++..+.++-.+|...+.||.||+|.|+ .|.+.|.||.+||++||.|+|
T Consensus 33 ~~w~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~F 106 (168)
T 3kpa_A 33 DKWTARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIAL 106 (168)
T ss_dssp HHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBC
T ss_pred HHHHHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeec
Confidence 3457899999999976 444554445689999999999999999 999999999999999999999
Q ss_pred ec-----------ccceeccCCCCCCCCCCccc
Q 022719 80 LT-----------TKICLSISNHHPEHWQPSWS 101 (293)
Q Consensus 80 ~T-----------G~ICLsiL~~~pe~W~P~~s 101 (293)
.+ |+|||+++ |+|.|+
T Consensus 107 p~ldgkt~kmYr~GkICLdIh------wkPlW~ 133 (168)
T 3kpa_A 107 PELEGKTVKMYRGGKICMTTH------FFPLWA 133 (168)
T ss_dssp GGGTTTCSSEETTTEECCCTT------HHHHHH
T ss_pred ccccCcCccccCCCcEEeccc------cchhhH
Confidence 98 99999975 777653
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.29 E-value=1e-11 Score=106.59 Aligned_cols=101 Identities=17% Similarity=0.284 Sum_probs=78.8
Q ss_pred HHHHHHHHHHhhCCC---CCeEEecCCCCceEEEEEEeCCCCCCCCCCe---EEEEeeCCCCCCCCCCeeeee-------
Q 022719 14 KRILQEVKEMQSNPS---DDFMSLPLEENIFEWQFAIRGPGDTEFEGGI---YHGRIQLPAEYPFKPPSFMLL------- 80 (293)
Q Consensus 14 kRL~kElk~L~~~p~---~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~---F~~~I~fP~dYP~~PP~v~F~------- 80 (293)
+|..+|+..+.+.-+ +...+...++...++-+.+.|.-.++|+||. |.+.|.||.+||++||.|.|.
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 677788887755331 1222344456666777777777779999999 889999999999999999883
Q ss_pred --------c------ccceeccCCCCCCCCCC-cccHHHHHHHHHHcCCC-CCC
Q 022719 81 --------T------TKICLSISNHHPEHWQP-SWSVRTALVALIAFMPT-NPN 118 (293)
Q Consensus 81 --------T------G~ICLsiL~~~pe~W~P-~~sI~~VL~~I~~lL~~-~P~ 118 (293)
. |+||+++|. .|+| +.+|.++|.+|+++|.+ ||+
T Consensus 111 ~~~~~I~~hpnVD~~G~I~lpyL~----~W~p~~s~L~~ll~~l~~lf~ep~~d 160 (162)
T 3r3q_A 111 TISSSLPIQEYIDSNGWIALPILH----AWDPAAMNLIMVVQELMSLLHEPPQD 160 (162)
T ss_dssp TSCTTSTHHHHBCTTSBBCCGGGG----SCCGGGCCHHHHHHHHHHTTSCCCCC
T ss_pred ccccccCCCCCCCCCCcEeCcccc----cCCCCcCcHHHHHHHHHHHhcCCCCC
Confidence 1 999999995 5998 78999999999999955 554
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=98.87 E-value=1.4e-09 Score=91.86 Aligned_cols=71 Identities=18% Similarity=0.400 Sum_probs=62.7
Q ss_pred CCCceEEEEEEeCCCCCCCCCCeEEE--EeeCCCCCCCCCCeeeeec----------------ccceeccCCCCCCCCCC
Q 022719 37 EENIFEWQFAIRGPGDTEFEGGIYHG--RIQLPAEYPFKPPSFMLLT----------------TKICLSISNHHPEHWQP 98 (293)
Q Consensus 37 ~~di~~W~~~I~GP~~TpYeGG~F~~--~I~fP~dYP~~PP~v~F~T----------------G~ICLsiL~~~pe~W~P 98 (293)
..+++.|.++|. .+|+|+.|.+ .|.||++||++||.| |++ |+||+.+|. +|++
T Consensus 50 ~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~----~W~~ 120 (146)
T 3obq_A 50 SRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLH----EWKH 120 (146)
T ss_dssp TCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHH----TCCT
T ss_pred hheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEeccccc----ccCC
Confidence 468999999997 6899999995 999999999999999 554 999999995 4987
Q ss_pred -cccHHHHHHHHHHcCCCC
Q 022719 99 -SWSVRTALVALIAFMPTN 116 (293)
Q Consensus 99 -~~sI~~VL~~I~~lL~~~ 116 (293)
..+|.+++..++..|.++
T Consensus 121 ~~snL~~ll~~l~~~F~~e 139 (146)
T 3obq_A 121 PQSDLLGLIQVMIVVFGDE 139 (146)
T ss_dssp TTCCHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHhhC
Confidence 899999999999998543
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.75 E-value=0.14 Score=40.77 Aligned_cols=88 Identities=16% Similarity=0.157 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeecccceeccCCC
Q 022719 12 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTTKICLSISNH 91 (293)
Q Consensus 12 a~kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~TG~ICLsiL~~ 91 (293)
...+...|+..|+.--+..+.... .....+.+.|..-.+..-+.-.+.+.|.||.+||..||.+.+..
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~~~--~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~---------- 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTVLS--ENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS---------- 78 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEECC--SSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE----------
T ss_pred hHHHHHHHHHHHHHHccCceEEcc--CCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc----------
Confidence 356678899999875545554422 22355666665211222233478899999999999999997542
Q ss_pred CCCCCCCcccHHHHHHHHHHcC
Q 022719 92 HPEHWQPSWSVRTALVALIAFM 113 (293)
Q Consensus 92 ~pe~W~P~~sI~~VL~~I~~lL 113 (293)
..|-+...+..+...|....
T Consensus 79 --~~~l~~~~~~~L~~~L~~~~ 98 (128)
T 2ebm_A 79 --QENLEDNDVSDILKLLALQA 98 (128)
T ss_dssp --ESSCCHHHHHHHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHHHHHH
Confidence 13555555555555555444
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=94.24 E-value=0.28 Score=39.49 Aligned_cols=67 Identities=16% Similarity=0.253 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHhhCCCCCeEEecCC------CCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeee
Q 022719 13 VKRILQEVKEMQSNPSDDFMSLPLE------ENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLL 80 (293)
Q Consensus 13 ~kRL~kElk~L~~~p~~gi~~~p~~------~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~ 80 (293)
..+-..|+..|+.--+..+...-.. +....+.+.|....+ .-..-.+.+.|.||.+||..||.|.+.
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~ 84 (138)
T 2yz0_A 12 YEIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFK 84 (138)
T ss_dssp HHHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEE
T ss_pred HHHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEe
Confidence 4566788888887554444432211 124567777763222 111346789999999999999999865
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=94.18 E-value=0.2 Score=39.89 Aligned_cols=68 Identities=18% Similarity=0.234 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhhCCCCCeEEecCC--CCceEEEEEEeCCCCCCCC--CCeEEEEeeCCCCCCCCCCeeeeec
Q 022719 14 KRILQEVKEMQSNPSDDFMSLPLE--ENIFEWQFAIRGPGDTEFE--GGIYHGRIQLPAEYPFKPPSFMLLT 81 (293)
Q Consensus 14 kRL~kElk~L~~~p~~gi~~~p~~--~di~~W~~~I~GP~~TpYe--GG~F~~~I~fP~dYP~~PP~v~F~T 81 (293)
.+...|+..|+.--+..+...... .+...+.+.|..+.+..-+ .-.+.+.|.||.+||..+|.+.+.+
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 357889998887555556543322 2345556666532221111 2367899999999999999998663
No 59
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=91.04 E-value=1.3 Score=38.43 Aligned_cols=83 Identities=13% Similarity=0.271 Sum_probs=59.6
Q ss_pred HHHHHHHHHHhhCCCCCeEEecCCCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeeecccceeccCCCCC
Q 022719 14 KRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTTKICLSISNHHP 93 (293)
Q Consensus 14 kRL~kElk~L~~~p~~gi~~~p~~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~TG~ICLsiL~~~p 93 (293)
.+|.+|+..|-=+. +.-.+.++...++.+..-. |....++|.++.+||.+||.+..-- ... .-
T Consensus 4 ~~li~Ei~~iGW~~-----l~~id~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~Dl-----P~~--~~ 66 (186)
T 3zqs_A 4 SSLIEEIGTLGWDK-----LVYADTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDF-----PVP--FC 66 (186)
T ss_dssp CSHHHHHHHHCGGG-----EEEECTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCC-----SSC--CC
T ss_pred HHHHHHHHHhCCce-----eeeecCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcC-----CCC--cc
Confidence 46888999883332 2223567889999998433 6788999999999999999875321 111 11
Q ss_pred CCCCCcccHHHHHHHHHHcC
Q 022719 94 EHWQPSWSVRTALVALIAFM 113 (293)
Q Consensus 94 e~W~P~~sI~~VL~~I~~lL 113 (293)
-.|.+..++.+++..++..|
T Consensus 67 ~~w~~~ssL~~v~~qF~~~L 86 (186)
T 3zqs_A 67 ASWTPQSSLISIYSQFLAAI 86 (186)
T ss_dssp CCCCTTCCHHHHHHHHHHHH
T ss_pred cccCCCccHHHHHHHHHHHH
Confidence 46999999999888877666
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=90.25 E-value=1.4 Score=35.21 Aligned_cols=67 Identities=19% Similarity=0.200 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHhhCCCCCeEEecCCC-----CceEEEEEEeCCCC-CCC-CCCeEEEEeeCCCCCCCCCCeeeee
Q 022719 13 VKRILQEVKEMQSNPSDDFMSLPLEE-----NIFEWQFAIRGPGD-TEF-EGGIYHGRIQLPAEYPFKPPSFMLL 80 (293)
Q Consensus 13 ~kRL~kElk~L~~~p~~gi~~~p~~~-----di~~W~~~I~GP~~-TpY-eGG~F~~~I~fP~dYP~~PP~v~F~ 80 (293)
..+...|+..|+.--+..+....... ....+.+.|. |.+ .-- ..-.+.+.|.||.+||..+|.|.+.
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 12 SQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp HHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEE
T ss_pred HHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEe
Confidence 45678899888875545554432211 1345566665 221 100 1236889999999999999999764
No 61
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.79 E-value=1 Score=35.64 Aligned_cols=66 Identities=12% Similarity=0.112 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhhCCCC--CeEEecC-CCCceEEEEEEeCCCCCCCCCCeEEEEeeCCCCCCCCCCeeeee
Q 022719 14 KRILQEVKEMQSNPSD--DFMSLPL-EENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLL 80 (293)
Q Consensus 14 kRL~kElk~L~~~p~~--gi~~~p~-~~di~~W~~~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~v~F~ 80 (293)
.+...|+..|+.--+. .+..... ..+...+.+.|.. .+..=..-.+.+.|.||.+||..||.+.+.
T Consensus 10 e~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 10 EPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp HHHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 3567788888763322 3332211 1234577777763 221001236889999999999999998643
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=86.16 E-value=3.9 Score=33.69 Aligned_cols=44 Identities=11% Similarity=0.126 Sum_probs=30.1
Q ss_pred eEEEEeeCCCCCCCCCCeeeeecccceeccCCCCCCCCCCcccHHHHHHHHHHcCCC
Q 022719 59 IYHGRIQLPAEYPFKPPSFMLLTTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT 115 (293)
Q Consensus 59 ~F~~~I~fP~dYP~~PP~v~F~TG~ICLsiL~~~pe~W~P~~sI~~VL~~I~~lL~~ 115 (293)
.+.++|.||.+||..+|.|... ..|-...-...+...|...+.+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~-------------~~~l~~~~~~~L~~~L~~~l~~ 119 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGR-------------SSELDRHQQLLLNKGLTSYIGT 119 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEE-------------CSSSCHHHHHHHHHHHHHHHTT
T ss_pred eEEEEEEcCCCCCCCCCcEEEE-------------eCCCCHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999754 1243333344455556666533
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=82.63 E-value=1.4 Score=36.09 Aligned_cols=22 Identities=23% Similarity=0.407 Sum_probs=19.7
Q ss_pred eEEEEeeCCCCCCCCCCeeeee
Q 022719 59 IYHGRIQLPAEYPFKPPSFMLL 80 (293)
Q Consensus 59 ~F~~~I~fP~dYP~~PP~v~F~ 80 (293)
.+.+.|.||.+||..||.+.+.
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~ 95 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVR 95 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEE
T ss_pred eEEEEEECCCCCCCCCCeEEEE
Confidence 5889999999999999999755
No 64
>1b9u_A Protein (ATP synthase); membrane protein, hydrolase; HET: GMA; NMR {Synthetic} SCOP: j.35.1.1
Probab=51.18 E-value=13 Score=22.60 Aligned_cols=20 Identities=20% Similarity=0.413 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 022719 261 TWAAVGLTIAILVLLLKKFM 280 (293)
Q Consensus 261 ~~~~~~~~~a~~~~~~~~~~ 280 (293)
|...-.+...|+++++|||+
T Consensus 6 ~l~~~~i~Flil~~~l~kf~ 25 (34)
T 1b9u_A 6 TILGQAIAFVLFVLFCMKYV 25 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44445567788899999986
No 65
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=37.91 E-value=20 Score=20.58 Aligned_cols=20 Identities=30% Similarity=0.587 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHhhCCCCCe
Q 022719 12 AVKRILQEVKEMQSNPSDDF 31 (293)
Q Consensus 12 a~kRL~kElk~L~~~p~~gi 31 (293)
-+.||+-|+...+.+||.|.
T Consensus 6 eldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 6 ELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHhhhccCCCCCC
Confidence 36899999999999998874
No 66
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=31.26 E-value=47 Score=24.17 Aligned_cols=22 Identities=18% Similarity=0.312 Sum_probs=18.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 022719 258 RLFTWAAVGLTIAILVLLLKKF 279 (293)
Q Consensus 258 ~~~~~~~~~~~~a~~~~~~~~~ 279 (293)
.+|..|++=.++.|++||-+|.
T Consensus 19 GGLifA~vLfi~GI~iilS~Kc 40 (72)
T 2jo1_A 19 GGLVIAGILFILGILIVLSRRC 40 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHcCcc
Confidence 4677788888888999999985
No 67
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=24.60 E-value=49 Score=23.81 Aligned_cols=22 Identities=14% Similarity=0.036 Sum_probs=15.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 022719 258 RLFTWAAVGLTIAILVLLLKKF 279 (293)
Q Consensus 258 ~~~~~~~~~~~~a~~~~~~~~~ 279 (293)
.+|..|+|=.++.|++||-+|.
T Consensus 20 gGLifA~vLfi~GI~iilS~kc 41 (67)
T 2jp3_A 20 GGLIFGGLLCIAGIALALSGKC 41 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHH
T ss_pred cchhhHHHHHHHHHHHHHcCcc
Confidence 3566677777777888887774
Done!