BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022721
(293 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T0K7|HIBC6_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial
OS=Arabidopsis thaliana GN=At4g13360 PE=1 SV=2
Length = 421
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/291 (73%), Positives = 251/291 (86%)
Query: 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 62
+VFTAEY+LIC I+ YKKPYISLMDG+TMGFG+G+SGHGRYR++TE+T+LAMPENGIGLF
Sbjct: 131 KVFTAEYTLICAIAAYKKPYISLMDGITMGFGLGLSGHGRYRVITERTVLAMPENGIGLF 190
Query: 63 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 122
PDVGFSYIAA PGGGSVGAYLG+TGKRIS PSDALF GLGT YVPS L SLKEA+L+
Sbjct: 191 PDVGFSYIAAHSPGGGSVGAYLGLTGKRISAPSDALFVGLGTHYVPSEKLASLKEAILSA 250
Query: 123 TFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAET 182
SEDP+QDI A L+KYSS+PE EA LK LLP I S FSS KS+++ IEELKK+Q S E+
Sbjct: 251 NLSEDPNQDIQATLSKYSSNPESEAHLKSLLPHIESAFSSNKSIKETIEELKKYQQSTES 310
Query: 183 SVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 242
SV +WA+EAL+G+ KGAPFSL LTQKYFS VA A K +NEL+ L+GVMK EYR+ALRS+
Sbjct: 311 SVVEWANEALKGLEKGAPFSLYLTQKYFSNVACAKSKPENELATLNGVMKTEYRIALRSA 370
Query: 243 LRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV 293
LR DFAEGVRAVL+DKDQNPKWNP S+EEV+++EVEALF+PL VEELKV
Sbjct: 371 LRGDFAEGVRAVLIDKDQNPKWNPTSIEEVDENEVEALFKPLSPEVEELKV 421
>sp|Q9LK08|HIBC7_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial
OS=Arabidopsis thaliana GN=At3g24360 PE=2 SV=1
Length = 418
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/291 (72%), Positives = 248/291 (85%)
Query: 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 62
+VFTAEYSLICKI+ Y+KPYISLMDG+TMGFG+G+SGHGRYR++TE+T+LAMPENGIGLF
Sbjct: 128 KVFTAEYSLICKIAGYRKPYISLMDGITMGFGLGLSGHGRYRVITERTVLAMPENGIGLF 187
Query: 63 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 122
PDVGFSYIAA PG GSVGAYLGMTG+RISTPSDALF GLGT YVPSG LGSL+EA+L+
Sbjct: 188 PDVGFSYIAAHSPGEGSVGAYLGMTGRRISTPSDALFVGLGTHYVPSGKLGSLREAILSA 247
Query: 123 TFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAET 182
S+DP Q I A L+ YSSDPE E+ L++LLPQI S FS KSV++ IEELKK Q S+E
Sbjct: 248 DLSKDPQQHIQATLSNYSSDPETESHLQMLLPQIESAFSVSKSVKETIEELKKFQQSSEA 307
Query: 183 SVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 242
SVA+WA+EA+QG+ KGAPFSL LT KYFSKVA A GKT+N ++ L+GVM EYR+ALRS+
Sbjct: 308 SVAEWANEAVQGIEKGAPFSLYLTHKYFSKVACAKGKTNNAMATLNGVMITEYRIALRSA 367
Query: 243 LRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV 293
LRSDF EGVRAVL DKDQNPKW PASL+EV+++EV+ALF PL EEL V
Sbjct: 368 LRSDFTEGVRAVLTDKDQNPKWKPASLDEVDETEVDALFMPLSPEFEELNV 418
>sp|Q5ZJ60|HIBCH_CHICK 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus
GN=HIBCH PE=2 SV=1
Length = 385
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 161/289 (55%), Gaps = 26/289 (8%)
Query: 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 62
+ F EY L I KKPY++L+DG+TMG G+G+S HG +R+ TEKT+ AMPE IGLF
Sbjct: 115 DYFREEYRLDNAIGTCKKPYVALIDGITMGGGVGLSVHGHFRVATEKTVFAMPETAIGLF 174
Query: 63 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 122
PDVG Y + G +G L +TG R+ D L AG+ T +V SG L L++ L+A+
Sbjct: 175 PDVGGGYFLPR--LSGKIGHLLALTGFRLKG-RDVLKAGIATHFVESGKLPELEKDLIAL 231
Query: 123 TFSEDPHQDIVALLAKYSS----DPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQS 178
++I LL Y D E E L + +I S FS+ S+ +I+++LK+ S
Sbjct: 232 --KSPSKENIADLLNSYHMQTKIDQEKEFVLDEHMERINSIFSAN-SMEEIVQKLKQDGS 288
Query: 179 SAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 238
+A + L+ + K +P SL LT + + A+ L V EYR++
Sbjct: 289 P-------FATKQLEAINKMSPTSLKLTLRQLREGATM---------SLQDVFTMEYRLS 332
Query: 239 LRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTG 287
DF EGVRAVL+DKDQ+P+W PA+LEEV+ V+ F+PLG
Sbjct: 333 QACMRGHDFYEGVRAVLIDKDQSPRWKPAALEEVSDEFVDNCFKPLGNN 381
>sp|Q8QZS1|HIBCH_MOUSE 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus
GN=Hibch PE=1 SV=1
Length = 385
Score = 174 bits (441), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 163/288 (56%), Gaps = 26/288 (9%)
Query: 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 62
++F EY L I+ +KPY++L+DG+TMG G+G+S HG++R+ TE++L AMPE GIGLF
Sbjct: 115 DLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLF 174
Query: 63 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 122
PDVG Y + G +G +L +TG R+ D AG+ T +V S L L+E LLA+
Sbjct: 175 PDVGGGYFLPRLQ--GKLGYFLALTGYRLKG-RDVHRAGIATHFVDSEKLRVLEEELLAL 231
Query: 123 TFSEDPHQDIVALLAKYSS----DPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQS 178
+D+ +L Y + D + + + +I SCFS+ +V QIIE L++ S
Sbjct: 232 --KSPSAEDVAGVLESYHAKSKMDQDKSIIFEEHMDKINSCFSA-NTVEQIIENLRQDGS 288
Query: 179 SAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 238
+A E ++ + K +P SL +T + + +S L V+ EYR+
Sbjct: 289 P-------FAIEQMKVINKMSPTSLKITLRQLMEGSS---------KTLQEVLIMEYRIT 332
Query: 239 LRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 286
DF EGVRAVL+DKDQ PKW PA+L++V ++ + F+ LG+
Sbjct: 333 QACMEGHDFHEGVRAVLIDKDQTPKWKPANLKDVTDEDLNSYFKSLGS 380
>sp|Q6NVY1|HIBCH_HUMAN 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens
GN=HIBCH PE=1 SV=2
Length = 386
Score = 171 bits (434), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 161/286 (56%), Gaps = 26/286 (9%)
Query: 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPD 64
F EY L + +KPY++L+ G+TMG G+G+S HG++R+ TEK L AMPE IGLFPD
Sbjct: 118 FREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPD 177
Query: 65 VGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTF 124
VG Y + G +G +L +TG R+ D AG+ T +V S L L+E LLA+
Sbjct: 178 VGGGYFLPRLQ--GKLGYFLALTGFRLKG-RDVYRAGIATHFVDSEKLAMLEEDLLAL-- 232
Query: 125 SEDPHQDIVALLAKYSS----DPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSA 180
++I ++L Y + D + L+ + +I SCFS+ +V +IIE L++ SS
Sbjct: 233 KSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSA-NTVEEIIENLQQDGSS- 290
Query: 181 ETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 240
+A E L+ + K +P SL +T + + +S L V+ EYR++
Sbjct: 291 ------FALEQLKVINKMSPTSLKITLRQLMEGSS---------KTLQEVLTMEYRLSQA 335
Query: 241 SSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 286
DF EGVRAVL+DKDQ+PKW PA L+EV + ++ F+ LG+
Sbjct: 336 CMRGHDFHEGVRAVLIDKDQSPKWKPADLKEVTEEDLNNHFKSLGS 381
>sp|Q5XIE6|HIBCH_RAT 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus
norvegicus GN=Hibch PE=1 SV=2
Length = 385
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 162/288 (56%), Gaps = 26/288 (9%)
Query: 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 62
++F EY L I+ +KPY++L+DG+TMG G+G+S HG++R+ TE++L AMPE GIGLF
Sbjct: 115 DLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLF 174
Query: 63 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 122
PDVG Y + G +G +L +TG R+ D AG+ T +V S L L+E LLA+
Sbjct: 175 PDVGGGYFLPRLQ--GKLGYFLALTGFRLKG-RDVHRAGIATHFVDSEKLHVLEEELLAL 231
Query: 123 TFSEDPHQDIVALLAKYSSDPEGEAPLKLL----LPQITSCFSSEKSVRQIIEELKKHQS 178
+D+ +L Y + + ++ + +I SCFS+ +V QI+E L++ S
Sbjct: 232 --KSPSAEDVAGVLESYHAKSKMGQDKSIIFEEHMDKINSCFSA-NTVEQILENLRQDGS 288
Query: 179 SAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 238
+A E ++ + K +P SL +T ++ KT L V+ EYR+
Sbjct: 289 P-------FAMEQIKVINKMSPTSLKIT---LRQLMEGSTKT------LQEVLTMEYRLT 332
Query: 239 LRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 286
DF EGVRAVL+DKDQ PKW PA L++V ++ + F+ LG+
Sbjct: 333 QACMEGHDFHEGVRAVLIDKDQTPKWKPADLKDVTDEDLNSYFKSLGS 380
>sp|Q28FR6|HIBCH_XENTR 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus
tropicalis GN=hibch PE=2 SV=1
Length = 385
Score = 167 bits (423), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 160/289 (55%), Gaps = 28/289 (9%)
Query: 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 62
+ F EY L I YKKPY++L+DG+TMG G+G+S HG +R+ +E TL AMPE IGLF
Sbjct: 115 DFFREEYILNNAIGTYKKPYVALIDGITMGGGVGLSVHGHFRVASENTLFAMPETAIGLF 174
Query: 63 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 122
PDVG Y + P G +G YL +TG R+ SD AG+ T +V S + SL++ L+A+
Sbjct: 175 PDVGGGYFLPRLP--GKLGLYLALTGFRLKG-SDVQKAGIATHFVESEKIPSLEQDLVAM 231
Query: 123 TFSEDPHQDIVA-LLAKYSSDPEG--EAPLKLL--LPQITSCFSSEKSVRQIIEELKKHQ 177
+ P ++ VA +L Y + + P L L +I S FS+ SV IIE L+
Sbjct: 232 ---KCPSKENVADVLDSYHNKSYAAQDKPFVLAEHLDKINSLFSAS-SVEAIIENLRCDG 287
Query: 178 SSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 237
SS +A + LQ + +P SL +T + + +S L V+ EYR+
Sbjct: 288 SS-------FALKQLQTLSTMSPTSLKITFRQLKEGSSM---------SLQEVLTMEYRL 331
Query: 238 ALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 286
+ DF EGVRAVL+DK+QN KWNP LEEV +++ F LG
Sbjct: 332 SQACMKGYDFYEGVRAVLIDKNQNAKWNPELLEEVTDDYIDSYFTSLGN 380
>sp|Q9LKJ1|HIBC1_ARATH 3-hydroxyisobutyryl-CoA hydrolase 1 OS=Arabidopsis thaliana GN=CHY1
PE=1 SV=1
Length = 378
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 151/282 (53%), Gaps = 22/282 (7%)
Query: 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPD 64
F++EY L ++ Y K +S+++G+ MG G G+S HGR+RI TE T+ AMPE +GLFPD
Sbjct: 91 FSSEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPD 150
Query: 65 VGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTF 124
VG SY ++ P G G Y+G+TG R+ ++ L GL T +VPS L +L EA L
Sbjct: 151 VGASYFLSRLP--GFFGEYVGLTGARLDG-AEMLACGLATHFVPSTRLTAL-EADLCRIN 206
Query: 125 SEDPHQDIVALLAKYSSDPE-GEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETS 183
S DP +L Y+ P + L I CF S ++V +II L++ A
Sbjct: 207 SNDP-TFASTILDAYTQHPRLKQQSAYRRLDVIDRCF-SRRTVEEIISALERE---ATQE 261
Query: 184 VAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV---ALR 240
W +Q + KG+P SL ++ + + L + + EYR+ ++
Sbjct: 262 ADGWISATIQALKKGSPASLKISLRSIR---------EGRLQGVGQCLIREYRMVCHVMK 312
Query: 241 SSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFE 282
+ DF EG RA+LVDKD+NPKW P LE++ S VE FE
Sbjct: 313 GEISKDFVEGCRAILVDKDKNPKWEPRRLEDMKDSMVEQYFE 354
>sp|A2VDC2|HIBCH_XENLA 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis
GN=hibch PE=2 SV=1
Length = 385
Score = 164 bits (416), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 160/289 (55%), Gaps = 28/289 (9%)
Query: 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 62
+ F EY L I KKPY++++DG+TMG G+G+S HG +R+ +EKTL AMPE IGLF
Sbjct: 115 DFFREEYILNNAIGTCKKPYVAVIDGITMGGGVGLSVHGHFRVASEKTLFAMPETAIGLF 174
Query: 63 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 122
PDVG Y + G +G YL +TG R+ SD AG+ T +V S L SL++ L+A+
Sbjct: 175 PDVGGGYFLPRLT--GKLGLYLALTGFRLK-GSDVQKAGIATHFVESEKLSSLEQDLVAM 231
Query: 123 TFSEDPHQDIVA-LLAKYS--SDPEGEAPLKLL--LPQITSCFSSEKSVRQIIEELKKHQ 177
+ P ++ VA +L Y S + P L + +I S FS +V +I+E LK
Sbjct: 232 ---KSPSKENVADVLDSYQKKSYAAQDKPFVLAENMDKINSLFSGN-TVEEIMENLKCDG 287
Query: 178 SSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 237
SS +A + LQ + +P SL +T + + AS L V+ EYR+
Sbjct: 288 SS-------FAMKQLQTLSTMSPTSLKITFRQLKEGASM---------SLQEVLTMEYRL 331
Query: 238 ALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 286
+ DF EGVRAVL+DKDQ KW P SLEEV + +++ F LG+
Sbjct: 332 SQACMNGHDFYEGVRAVLIDKDQKAKWKPESLEEVTEDYIDSCFTSLGS 380
>sp|Q6NMB0|HIBC3_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 3 OS=Arabidopsis
thaliana GN=At2g30660 PE=2 SV=1
Length = 378
Score = 160 bits (406), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 153/283 (54%), Gaps = 22/283 (7%)
Query: 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 62
+ F +Y+L ++ Y KP +S+++G+ MG G G+S HGR+RI TE T+ AMPE +GLF
Sbjct: 85 DFFRDQYTLNYVMATYSKPQVSILNGIVMGAGAGVSIHGRFRIATENTVFAMPETSLGLF 144
Query: 63 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 122
PDVG SY ++ P G G Y+G+TG R+ ++ L GL T +VPS L +L+ L V
Sbjct: 145 PDVGASYFLSRLP--GFFGEYVGLTGARLDG-AELLACGLATHFVPSTRLTALETDLCKV 201
Query: 123 TFSEDPHQDIVALLAKYSSDPE-GEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAE 181
S DP + +L Y+ P + L I CF S++++ +II L++ +
Sbjct: 202 G-SSDP-SFVSTILDAYTQHPHLKQKSAYHRLDVIDRCF-SKRTMEEIISALERETTQ-- 256
Query: 182 TSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV---A 238
+ W+ ++ + K +P SL ++ + + L + + EYR+
Sbjct: 257 -ELDDWSLTTIRALKKSSPSSLKISLRSIR---------EGRLQGVGHCLTREYRMVCHV 306
Query: 239 LRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALF 281
++ L D EG RA+L+DKD+NPKW P LE++ S V+ F
Sbjct: 307 MKGDLSKDLVEGCRAILIDKDRNPKWEPRRLEDMKDSMVDQFF 349
>sp|Q58EB4|HIBCH_DANRE 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio
GN=hibch PE=2 SV=1
Length = 382
Score = 158 bits (400), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 149/283 (52%), Gaps = 24/283 (8%)
Query: 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPD 64
F EY L I Y+KPY++L++G+TMG G+G+S HG++R+ TEKTL AMPE GIGLFPD
Sbjct: 114 FREEYILNNTIGTYQKPYVALINGITMGGGVGLSVHGQFRVATEKTLFAMPETGIGLFPD 173
Query: 65 VGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTF 124
VG Y + G +G +L +TG R+ D G+ T +V S + SL++ L V
Sbjct: 174 VGGGYFLPRLQ--GKLGLFLALTGFRLKG-RDVQRVGVATHFVQSEKIESLEKDL--VDL 228
Query: 125 SEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS---SEKSVRQIIEELKKHQSSAE 181
D+ LL Y +A +L + T S SV +I+E LKK S+
Sbjct: 229 KSPSISDVAQLLDSYQEQSHLDAEKPFVLQEQTEAIDRLFSAGSVEEIVENLKKDGSA-- 286
Query: 182 TSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 241
+A + + + K +P SL LT + + A L V EYR++
Sbjct: 287 -----FALKQAETLAKMSPTSLKLTFRQIEEGARM---------SLQEVFMMEYRLSQAC 332
Query: 242 SLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPL 284
DF EGVRAVL+DKDQ+PKW P++L V++ V+ F L
Sbjct: 333 MNGHDFYEGVRAVLIDKDQSPKWKPSTLAGVSEQFVDKCFSSL 375
>sp|Q1PEY5|HIBC2_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 2 OS=Arabidopsis
thaliana GN=At2g30650 PE=2 SV=1
Length = 378
Score = 157 bits (397), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 154/294 (52%), Gaps = 24/294 (8%)
Query: 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPD 64
F Y+L +S Y+KP +S+++G+ MG G G+S +GR+RI TE T+ AMPE +GLFPD
Sbjct: 87 FKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATENTVFAMPETALGLFPD 146
Query: 65 VGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTF 124
VG SY ++ P G G Y+G+TG R+ ++ L GL T +VPS +L +L+ L V
Sbjct: 147 VGASYFLSRLP--GFFGEYVGLTGARLDG-AEMLACGLATHFVPSISLTALEAELYKVGS 203
Query: 125 SEDPHQDIVALLAKYSSDPE-GEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETS 183
S I +L Y+ P + L I CF S+++V +I L++ +
Sbjct: 204 SNQTF--ISTILDAYAEYPHLNQHSSYHRLDVIDRCF-SKRTVEEIFSALEREVTQKPND 260
Query: 184 VAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV---ALR 240
W +Q + K +P L + S + L + + EYR+ ++
Sbjct: 261 ---WLLATIQALEKASPSCLKI---------SLRSIREGRLQGVGQCLIREYRMVCHVMK 308
Query: 241 SSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT--GVEELK 292
+ DF EG RAVL+DKD+NPKW P LE+V S V+ FE + G E+LK
Sbjct: 309 GDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYFERVEDEEGWEDLK 362
>sp|Q2HJ73|HIBCH_BOVIN 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Bos taurus
GN=HIBCH PE=2 SV=1
Length = 386
Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 164/290 (56%), Gaps = 28/290 (9%)
Query: 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 62
++F EY L I +KPYI+L+ G+TMG G+G+S HG++R+ TEK++ AMPE IGLF
Sbjct: 116 DLFREEYILNNAIDSCQKPYIALIHGITMGGGVGVSVHGQFRVATEKSVFAMPETAIGLF 175
Query: 63 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 122
PDVG Y + G +G +L +TG R+ D AG+ T +V LG L+E LLA+
Sbjct: 176 PDVGGGYFLPRLQ--GKLGYFLALTGFRLKG-RDVYTAGIATHFVDFEKLGMLEEDLLAL 232
Query: 123 TFSEDPHQDIVALL-----AKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQ 177
+ P ++ +A + AK +D + L+ + +I S FS+ +V QI++ L++
Sbjct: 233 ---KSPSKENIADVLETYHAKSKTDQDKPFILEEHMDKINSWFSAN-TVEQIVDNLQQDG 288
Query: 178 SSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 237
SS +A E L+ + K +P SL +T ++ KT L V+ EYR+
Sbjct: 289 SS-------FALEQLKVIKKMSPTSLKIT---LRQLMEGSSKT------LPEVLIMEYRL 332
Query: 238 ALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTG 287
+ DF EGVRAVL+DKDQ+PKW PA L+EV ++ F+ LG+
Sbjct: 333 SQACMKGHDFHEGVRAVLIDKDQSPKWKPADLKEVTDEDLNDYFKSLGSN 382
>sp|Q55GS6|HIBCH_DICDI 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Dictyostelium
discoideum GN=hibch PE=3 SV=1
Length = 381
Score = 144 bits (362), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 154/287 (53%), Gaps = 23/287 (8%)
Query: 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPD 64
F EY L I +S+ +G MG GIG+S HG++R+ TE T+ AMPE GIG F D
Sbjct: 113 FREEYILNNLIGTNPIAQVSIYNGFAMGGGIGLSVHGKFRVATENTVFAMPETGIGFFCD 172
Query: 65 VGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTF 124
VG SY + P + G YL +TG ++ ++ AG+ T +V + ++ +L++ +
Sbjct: 173 VGGSYFLPRLP--NNYGMYLALTGSKLKG-NNVYLAGVATHFVSNEHIQALEK---EIEE 226
Query: 125 SEDP-HQDIVALLAKYSSDPEGEA-PLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAET 182
E+P Q I ++L KY + + L I F + SV++I E+L+ ++S
Sbjct: 227 CENPTSQTINSILTKYHDKSKSTSNEYNDNLGDIERIF-GKNSVKEIFEQLELLENS--- 282
Query: 183 SVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 242
+WA + L+ + +P SL V K +L L+ ++ E+R++
Sbjct: 283 ---EWAKQTLKTLKSVSPSSLM--------VVFEQMKQGAKLPSLAKCLEMEFRISQHFL 331
Query: 243 LRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVE 289
+ DF EGVRA+LVDKD+NPKW P S+++++Q+ V + F+PL E
Sbjct: 332 EKPDFFEGVRALLVDKDKNPKWLPPSIDQIDQTLVNSYFKPLSNNKE 378
>sp|Q9SHJ8|HIBC8_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 OS=Arabidopsis
thaliana GN=At1g06550 PE=2 SV=2
Length = 387
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 156/308 (50%), Gaps = 46/308 (14%)
Query: 2 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGL 61
+EV Y L I YKK +SL++G++MG G + ++ +VTEKT+ A PE G
Sbjct: 88 LEVVYRMYWLCYHIHTYKKTQVSLVNGISMGGGAALMVPMKFSVVTEKTVFATPEASFGF 147
Query: 62 FPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLA 121
D GFSYI ++ P G +G +L +TG R++ + + G+ T +VPSG L L+ L++
Sbjct: 148 HTDCGFSYIHSRLP--GHLGEFLALTGARLNG-KELVAIGMATHFVPSGKLMDLEARLVS 204
Query: 122 VT-------------FSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQ 168
+ FSE + D ++L K S I CFS E SV+Q
Sbjct: 205 LDSGDADVVQSTIEEFSEKVNLDKDSILNKQSV--------------INECFSKE-SVKQ 249
Query: 169 IIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLS 228
II+ ++ A +W ++G+ + +P L + + +T LS
Sbjct: 250 IIQAF---EAEASKDGNEWITPVIKGLKRSSPTGLKIV---LQSIREGRKQT------LS 297
Query: 229 GVMKYEYRVA---LRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLG 285
+K E+R+ LR ++ D EG+RA+ +DKD +PKWNPA+L+EV+ ++ ++F+
Sbjct: 298 DCLKKEFRLTLNILRKTISPDMYEGIRALTIDKDNSPKWNPATLDEVDDEKINSVFKLFE 357
Query: 286 TGVEELKV 293
EL++
Sbjct: 358 DDDIELQI 365
>sp|Q8RXN4|HIBC5_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial
OS=Arabidopsis thaliana GN=At4g31810 PE=2 SV=1
Length = 409
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 144/282 (51%), Gaps = 20/282 (7%)
Query: 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPD 64
F Y + Y KP I++MDGVTMG G GIS G +R+ T+KT+LA PE IG PD
Sbjct: 123 FENLYKFVYLQGTYLKPNIAIMDGVTMGCGGGISLPGMFRVATDKTVLAHPEVQIGFHPD 182
Query: 65 VGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTF 124
G SY ++ P G +G YL +TG++++ + + GL T Y + L L E +
Sbjct: 183 AGASYYLSRLP--GYLGEYLALTGQKLNG-VEMIACGLATHYCLNARL-PLIEERIGKLL 238
Query: 125 SEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSV 184
++DP I LA+Y ++ L ++ + +V +IIE + ++ A S
Sbjct: 239 TDDPAV-IEDSLAQYGDLVYPDSSSVLHKIELIDKYFGLDTVEEIIEAM---ENEAANSC 294
Query: 185 AQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVAL---RS 241
+W + L+ + + +P SL +T + + L + +EYR+++
Sbjct: 295 NEWCKKTLKQIKEASPLSLKITLQSIR---------EGRFQTLDQCLTHEYRISICGVSK 345
Query: 242 SLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEP 283
+ DF EG+RA LVDKD PKW+P LE+V++ V+ F P
Sbjct: 346 VVSGDFCEGIRARLVDKDFAPKWDPPRLEDVSKDMVDCYFTP 387
>sp|O74802|HIBCH_SCHPO 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ehd3 PE=3 SV=1
Length = 429
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 141/282 (50%), Gaps = 20/282 (7%)
Query: 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 62
F EY L ++ Y+KP ++LM+G+TMG G G++ H +RI E T+ AMPE GIG F
Sbjct: 136 HAFAQEYRLSHTLATYQKPVVALMNGITMGGGSGLAMHVPFRIACEDTMFAMPETGIGYF 195
Query: 63 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 122
DV S+ ++ P G G YLG+T + I D L G+ T +VP L++ L +
Sbjct: 196 TDVAASFFFSRLP--GYFGTYLGLTSQ-IVKGYDCLRTGIATHFVPKHMFPHLEDRLAEL 252
Query: 123 TFSE--DPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSA 180
S+ + I+ SS P P ++ I CF +V II LK++ S+
Sbjct: 253 NTSDISKINNTILEFAEFASSSPPTFTP--DVMDVINKCFCKNDTV-DIIRALKEYASNT 309
Query: 181 ETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 240
+++A++A ++ + +P S+ +T + A +S Y++ V+
Sbjct: 310 -SALAEFAKSTVKTLYSKSPTSIAVTNRLIKSAAKW---------SISEAFYYDHIVSYY 359
Query: 241 SSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFE 282
+ DF EGV A L+ K +NPKW+ + E + ++E F+
Sbjct: 360 MLKQPDFVEGVNAQLITKTKNPKWSKS--HEYHFKDLENYFK 399
>sp|Q5XF59|HIBC4_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial
OS=Arabidopsis thaliana GN=At3g60510 PE=2 SV=1
Length = 401
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 157/284 (55%), Gaps = 24/284 (8%)
Query: 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 62
E F++ YS I + Y KP++++++GVTMG G G+S G +R+ T++T+ A PE IG
Sbjct: 117 EFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFH 176
Query: 63 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 122
PD G S+ + P G +G YLG+TG ++S ++ L GL T Y+ S + ++E L +
Sbjct: 177 PDAGASFNLSHLP--GRLGEYLGLTGLKLSG-AEMLACGLATHYIRSEEVPVMEEQLKKL 233
Query: 123 TFSEDPHQDIVALLAKYS--SDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSA 180
++DP + + L K + + PE ++ + + CFS + +V +II+ L+ S
Sbjct: 234 -LTDDPSV-VESCLEKCAEVAHPEKTGVIR-RIDLLEKCFSHD-TVEEIIDSLEIEASRR 289
Query: 181 ETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 240
+ + W L+ + + +P SL KVA + L L + EYR++L+
Sbjct: 290 KDT---WCITTLRRLKESSPLSL--------KVA-LRSIREGRLQTLDQCLIREYRMSLQ 337
Query: 241 ---SSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALF 281
+ +F EGVRA L+DKD+ PKW+P SLE+V++ V+ F
Sbjct: 338 GLIGPMSGNFCEGVRARLIDKDEAPKWDPPSLEKVSEDMVDDYF 381
>sp|P28817|HIBCH_YEAST 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=EHD3 PE=1
SV=2
Length = 500
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 136/282 (48%), Gaps = 34/282 (12%)
Query: 2 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGL 61
I+ FT EYSL +I+ Y KP ++ MDG+TMG G+G+S H +RI TE T AMPE IG
Sbjct: 118 IKFFTDEYSLNFQIATYLKPIVTFMDGITMGGGVGLSIHTPFRIATENTKWAMPEMDIGF 177
Query: 62 FPDVGFSY----IAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKE 117
FPDVG ++ I + YL +TG+ + T +DA GL + YV S NL +L++
Sbjct: 178 FPDVGSTFALPRIVTLANSNSQMALYLCLTGE-VVTGADAYMLGLASHYVSSENLDALQK 236
Query: 118 AL--LAVTFSEDPHQDIVALLAKYSSDPEGEAPL---------KLLLPQITSCFSSEK-- 164
L ++ F+ DP + S D E +PL L I +CF+ K
Sbjct: 237 RLGEISPPFNNDPQSAYFFGMVNESID-EFVSPLPKDYVFKYSNEKLNVIEACFNLSKNG 295
Query: 165 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNEL 224
++ I+ L++++ SAE +A E + +P SL + + + + H
Sbjct: 296 TIEDIMNNLRQYEGSAEGKA--FAQEIKTKLLTKSPSSLQIALRLVQENSRDH------- 346
Query: 225 SKLSGVMKYEYRVALRSSLRSD----FAEGVRAVLVDKDQNP 262
+ +K + A + D F+E + L+DK + P
Sbjct: 347 --IESAIKRDLYTAANMCMNQDSLVEFSEATKHKLIDKQRVP 386
>sp|A4YI89|HPCD_METS5 3-hydroxypropionyl-coenzyme A dehydratase OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=Msed_2001 PE=1 SV=1
Length = 259
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 11 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYI 70
++ KI KP I++++G +G G+ ++ RI E+ L +PE +G++P G +
Sbjct: 88 IMDKIEALSKPTIAMINGYALGGGLELALACDIRIAAEEAQLGLPEINLGIYPGYGGTQR 147
Query: 71 AAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNL 112
+ G G + MTG RI DA GL VP NL
Sbjct: 148 LTRVIGKGRALEMM-MTGDRIPG-KDAEKYGLVNRVVPLANL 187
>sp|A4TM82|FADJ_YERPP Fatty acid oxidation complex subunit alpha OS=Yersinia pestis
(strain Pestoides F) GN=fadJ PE=3 SV=1
Length = 774
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 67
S++ +I+ + P ++ + G +G G+ ++ H R + +KT+L +PE +GL P G
Sbjct: 126 SILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGG 185
Query: 68 SYIAAKGPGGGSVGAYLGM--TGKRISTPSDALFAGLGTDYVP 108
+ + P V L M TGK+I P AL GL D VP
Sbjct: 186 TQ---RLPRLVGVSKALDMILTGKQIR-PRQALKMGLVDDVVP 224
>sp|Q668V1|FADJ_YERPS Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=fadJ
PE=3 SV=2
Length = 753
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 67
S++ +I+ + P ++ + G +G G+ ++ H R + +KT+L +PE +GL P G
Sbjct: 99 SILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGG 158
Query: 68 SYIAAKGPGGGSVGAYLGM--TGKRISTPSDALFAGLGTDYVP 108
+ + P V L M TGK+I P AL GL D VP
Sbjct: 159 TQ---RLPRLVGVSKALDMILTGKQIR-PRQALKMGLVDDVVP 197
>sp|Q1CHK2|FADJ_YERPN Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=fadJ PE=3 SV=2
Length = 747
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 67
S++ +I+ + P ++ + G +G G+ ++ H R + +KT+L +PE +GL P G
Sbjct: 99 SILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGG 158
Query: 68 SYIAAKGPGGGSVGAYLGM--TGKRISTPSDALFAGLGTDYVP 108
+ + P V L M TGK+I P AL GL D VP
Sbjct: 159 TQ---RLPRLVGVSKALDMILTGKQIR-PRQALKMGLVDDVVP 197
>sp|Q8ZD45|FADJ_YERPE Fatty acid oxidation complex subunit alpha OS=Yersinia pestis
GN=fadJ PE=3 SV=2
Length = 747
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 67
S++ +I+ + P ++ + G +G G+ ++ H R + +KT+L +PE +GL P G
Sbjct: 99 SILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGG 158
Query: 68 SYIAAKGPGGGSVGAYLGM--TGKRISTPSDALFAGLGTDYVP 108
+ + P V L M TGK+I P AL GL D VP
Sbjct: 159 TQ---RLPRLVGVSKALDMILTGKQIR-PRQALKMGLVDDVVP 197
>sp|Q1C660|FADJ_YERPA Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=fadJ PE=3 SV=2
Length = 747
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 67
S++ +I+ + P ++ + G +G G+ ++ H R + +KT+L +PE +GL P G
Sbjct: 99 SILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGG 158
Query: 68 SYIAAKGPGGGSVGAYLGM--TGKRISTPSDALFAGLGTDYVP 108
+ + P V L M TGK+I P AL GL D VP
Sbjct: 159 TQ---RLPRLVGVSKALDMILTGKQIR-PRQALKMGLVDDVVP 197
>sp|A7FGK1|FADJ_YERP3 Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=fadJ PE=3 SV=1
Length = 747
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 67
S++ +I+ + P ++ + G +G G+ ++ H R + +KT+L +PE +GL P G
Sbjct: 99 SILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGG 158
Query: 68 SYIAAKGPGGGSVGAYLGM--TGKRISTPSDALFAGLGTDYVP 108
+ + P V L M TGK+I P AL GL D VP
Sbjct: 159 TQ---RLPRLVGVSKALDMILTGKQIR-PRQALKMGLVDDVVP 197
>sp|A8GH86|FADJ_SERP5 Fatty acid oxidation complex subunit alpha OS=Serratia
proteamaculans (strain 568) GN=fadJ PE=3 SV=2
Length = 715
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 67
S + +I+ ++ P ++ + G +G G+ ++ HGR + +KT L +PE +GL P G
Sbjct: 96 STLAQIAAFQVPVVAAIHGACLGGGLELALACHGRVCSLDDKTALGLPEVQLGLLPGSGG 155
Query: 68 SYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNL 112
+ + G S + +TGK I AL GL D VP L
Sbjct: 156 TQRLPRLI-GASKALDMILTGKHIRA-RQALRLGLVDDAVPQSIL 198
>sp|Q1Q8J9|FADB_PSYCK Fatty acid oxidation complex subunit alpha OS=Psychrobacter
cryohalolentis (strain K5) GN=fadB PE=3 SV=1
Length = 719
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 30/154 (19%)
Query: 21 PYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 80
P ++ ++G +G G ++ YR++++K ++ +PE +G+FP GF GG+V
Sbjct: 105 PKVAAINGAALGGGCEMTLVCEYRVMSDKAIIGLPETQLGIFP--GF---------GGTV 153
Query: 81 GAYLGMTGKRISTPSDAL-FAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQD-IVALLAK 138
+ R+ +AL GT P L +LK L+ T + D QD + L+ K
Sbjct: 154 RS------TRVIGIDNALELIATGT---PKKALDALKLGLVDATVAADDLQDAAIDLVKK 204
Query: 139 YSSD--------PEGEAPLKLLLPQITSCFSSEK 164
SD E P+KL + F+S K
Sbjct: 205 CISDELDWQAKREEKLVPVKLNQLEQAMAFNSAK 238
>sp|B4TQC2|FADJ_SALSV Fatty acid oxidation complex subunit alpha OS=Salmonella
schwarzengrund (strain CVM19633) GN=fadJ PE=3 SV=1
Length = 715
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 11 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFS 68
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G +
Sbjct: 93 LMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGT 152
Query: 69 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 128
+ G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 153 QRLPRLV-GVSTALDMILTGKQLRA-RQALRAGLVDDVVPQ---TILLEAAVELAKKERL 207
Query: 129 HQDIVALLAKYSSDPEGEAPLKLLLPQITS 158
Q + + + + P G A L L+ + T+
Sbjct: 208 AQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|Q8ZNA7|FADJ_SALTY Fatty acid oxidation complex subunit alpha OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=fadJ PE=3 SV=1
Length = 715
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGF 67
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G
Sbjct: 92 QLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGG 151
Query: 68 SYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSED 127
+ + G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 152 TQRLPRLV-GVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKER 206
Query: 128 PHQDIVALLAKYSSDPEGEAPLKLLLPQITS 158
Q + + + + P G A L L+ + T+
Sbjct: 207 LAQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|B5R3R9|FADJ_SALEP Fatty acid oxidation complex subunit alpha OS=Salmonella
enteritidis PT4 (strain P125109) GN=fadJ PE=3 SV=1
Length = 715
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGF 67
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G
Sbjct: 92 QLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGG 151
Query: 68 SYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSED 127
+ + G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 152 TQRLPRLV-GVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKER 206
Query: 128 PHQDIVALLAKYSSDPEGEAPLKLLLPQITS 158
Q + + + + P G A L L+ + T+
Sbjct: 207 LAQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|A9N453|FADJ_SALPB Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi
B (strain ATCC BAA-1250 / SPB7) GN=fadJ PE=3 SV=1
Length = 715
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGF 67
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G
Sbjct: 92 QLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGG 151
Query: 68 SYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSED 127
+ + G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 152 TQRLPRLV-GVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKER 206
Query: 128 PHQDIVALLAKYSSDPEGEAPLKLLLPQITS 158
Q + + + + P G A L L+ + T+
Sbjct: 207 LAQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|B4SZR0|FADJ_SALNS Fatty acid oxidation complex subunit alpha OS=Salmonella newport
(strain SL254) GN=fadJ PE=3 SV=1
Length = 715
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGF 67
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G
Sbjct: 92 QLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGG 151
Query: 68 SYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSED 127
+ + G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 152 TQRLPRLV-GVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKER 206
Query: 128 PHQDIVALLAKYSSDPEGEAPLKLLLPQITS 158
Q + + + + P G A L L+ + T+
Sbjct: 207 LAQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|B4TCA8|FADJ_SALHS Fatty acid oxidation complex subunit alpha OS=Salmonella heidelberg
(strain SL476) GN=fadJ PE=3 SV=1
Length = 715
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGF 67
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G
Sbjct: 92 QLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGG 151
Query: 68 SYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSED 127
+ + G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 152 TQRLPRLV-GVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKER 206
Query: 128 PHQDIVALLAKYSSDPEGEAPLKLLLPQITS 158
Q + + + + P G A L L+ + T+
Sbjct: 207 LAQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|B5FPN1|FADJ_SALDC Fatty acid oxidation complex subunit alpha OS=Salmonella dublin
(strain CT_02021853) GN=fadJ PE=3 SV=1
Length = 715
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGF 67
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G
Sbjct: 92 QLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGG 151
Query: 68 SYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSED 127
+ + G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 152 TQRLPR-LVGVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKER 206
Query: 128 PHQDIVALLAKYSSDPEGEAPLKLLLPQITS 158
Q + + + + P G A L L+ + T+
Sbjct: 207 LAQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|Q57LW6|FADJ_SALCH Fatty acid oxidation complex subunit alpha OS=Salmonella
choleraesuis (strain SC-B67) GN=fadJ PE=3 SV=1
Length = 715
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGF 67
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G
Sbjct: 92 QLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGG 151
Query: 68 SYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSED 127
+ + G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 152 TQRLPRLV-GVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKER 206
Query: 128 PHQDIVALLAKYSSDPEGEAPLKLLLPQITS 158
Q + + + + P G A L L+ + T+
Sbjct: 207 LAQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|B5EZR9|FADJ_SALA4 Fatty acid oxidation complex subunit alpha OS=Salmonella agona
(strain SL483) GN=fadJ PE=3 SV=1
Length = 715
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGF 67
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G
Sbjct: 92 QLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGG 151
Query: 68 SYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSED 127
+ + G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 152 TQRLPRLV-GVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKER 206
Query: 128 PHQDIVALLAKYSSDPEGEAPLKLLLPQITS 158
Q + + + + P G A L L+ + T+
Sbjct: 207 LAQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|Q8Z4Z0|FADJ_SALTI Fatty acid oxidation complex subunit alpha OS=Salmonella typhi
GN=fadJ PE=3 SV=1
Length = 715
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 11 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFS 68
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G +
Sbjct: 93 LMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGT 152
Query: 69 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 128
+ G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 153 QRLPRLV-GVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERL 207
Query: 129 HQDIVALLAKYSSDPEGEAPLKLLLPQITS 158
Q + + + + P G A L L+ + T+
Sbjct: 208 AQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|B5RCL3|FADJ_SALG2 Fatty acid oxidation complex subunit alpha OS=Salmonella gallinarum
(strain 287/91 / NCTC 13346) GN=fadJ PE=3 SV=1
Length = 715
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGF 67
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G
Sbjct: 92 QLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGG 151
Query: 68 SYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSED 127
+ + G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 152 TQRLPRLV-GVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKER 206
Query: 128 PHQDIVALLAKYSSDPEGEAPLKLLLPQITS 158
Q + + + + P G A L L+ + T+
Sbjct: 207 LAQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|A6TC19|FADJ_KLEP7 Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
GN=fadJ PE=3 SV=1
Length = 714
Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 67
++ +I P I+ + G +G G+ ++ HGR EKT L +PE +GL P G
Sbjct: 92 QIMAEIHGLSIPVIAAIHGACLGGGLELALACHGRICSDDEKTRLGLPEVQLGLLPGSGG 151
Query: 68 SYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNL 112
+ + G S + +TGK++ P AL AGL + VP L
Sbjct: 152 TQRLPRLI-GVSTALDMMLTGKQLR-PRQALKAGLVDEVVPQAIL 194
>sp|B7LLD0|FADJ_ESCF3 Fatty acid oxidation complex subunit alpha OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=fadJ PE=3 SV=1
Length = 714
Score = 39.3 bits (90), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 11 LICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 68
L+ +I P I+ + G +G G+ ++ HGR KT+L +PE +GL P G +
Sbjct: 93 LMAEIHALPVPVIAAIHGACLGGGLELALACHGRICTDDPKTILGLPEVQLGLLPGSGGT 152
Query: 69 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNL 112
+ G S + +TGK++ P AL +GL + VP L
Sbjct: 153 QRLPRLV-GLSTALDMILTGKQLR-PGQALKSGLVDEIVPQSIL 194
>sp|Q4FQC6|FADB_PSYA2 Fatty acid oxidation complex subunit alpha OS=Psychrobacter
arcticus (strain DSM 17307 / 273-4) GN=fadB PE=3 SV=1
Length = 719
Score = 38.5 bits (88), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 21 PYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 80
P ++ ++G +G G ++ YR++++K ++ +PE +G+FP GF GG+V
Sbjct: 105 PKVAAINGAALGGGCEMTLVCEYRVMSDKAIIGLPETQLGIFP--GF---------GGTV 153
Query: 81 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAK 138
R+ +AL L P L +LK L+ T + D QD L K
Sbjct: 154 ------RSTRVIGIDNAL--ELIATGAPKKALDALKLGLVDATVAADDLQDAAIDLVK 203
>sp|B7N5V2|FADJ_ECOLU Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 38.1 bits (87), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 11 LICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 68
L+ +I P I+ + G +G G+ ++ HGR KT+L +PE +GL P G +
Sbjct: 93 LMAEIHALPVPVIAAIHGACLGGGLELALACHGRMCTDDPKTVLGLPEVQLGLLPGSGGT 152
Query: 69 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 128
+ G S + +TGK++ AL GL D VP L EA + + + P
Sbjct: 153 QRLPRLI-GVSTALEMILTGKQLRA-KQALKLGLVDDVVPQ---SILLEAAVELAKQDRP 207
Query: 129 HQDIVALLAKYSSDPEGEAPL 149
+ + + + P G A L
Sbjct: 208 SSRPLPVRERILAGPLGRALL 228
>sp|B1LME7|FADJ_ECOSM Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 38.1 bits (87), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 11 LICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 68
L+ +I P I+ + G +G G+ ++ HGR KT+L +PE +GL P G +
Sbjct: 93 LMAEIHALPVPVIAAIHGACLGGGLELALACHGRVCTDDAKTVLGLPEVQLGLLPGSGGT 152
Query: 69 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 128
+ G S + +TGK++ AL GL D VP L EA + + + P
Sbjct: 153 QRLPRLI-GVSTALEMILTGKQLRA-KQALKLGLVDDVVPQ---SILLEAAVELAKQDRP 207
Query: 129 HQDIVALLAKYSSDPEGEAPL 149
+ + + + P G A L
Sbjct: 208 SSRPLPVRERILAGPLGRALL 228
>sp|B7NP24|FADJ_ECO7I Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 38.1 bits (87), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 11 LICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 68
L+ +I P I+ + G +G G+ ++ HGR KT+L +PE +GL P G +
Sbjct: 93 LMAEIHALPVPVIAAIHGACLGGGLELALACHGRVCTDDAKTVLGLPEVQLGLLPGSGGT 152
Query: 69 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 128
+ G S + +TGK++ AL GL D VP L EA + + + P
Sbjct: 153 QRLPRLI-GVSTALEMILTGKQLRA-KQALKLGLVDDVVPQ---SILLEAAVELAKQDRP 207
Query: 129 HQDIVALLAKYSSDPEGEAPL 149
+ + + + P G A L
Sbjct: 208 SSRPLPVRERILAGPLGRALL 228
>sp|Q8XCP2|FADJ_ECO57 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 GN=fadJ PE=3 SV=1
Length = 714
Score = 38.1 bits (87), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 11 LICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 68
L+ +I P I+ + G +G G+ ++ HGR KT+L +PE +GL P G +
Sbjct: 93 LMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGT 152
Query: 69 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 128
+ G S + +TGK++ AL GL D VP L EA + + + P
Sbjct: 153 QRLPRLI-GVSTALEMILTGKQLRA-KQALKLGLVDDVVPH---SILLEAAVELAKKDRP 207
Query: 129 HQDIVALLAKYSSDPEGEAPL 149
+ + + + P G A L
Sbjct: 208 SSRPLPVRERILAGPLGRAQL 228
>sp|Q0T2E6|FADJ_SHIF8 Fatty acid oxidation complex subunit alpha OS=Shigella flexneri
serotype 5b (strain 8401) GN=fadJ PE=3 SV=1
Length = 714
Score = 38.1 bits (87), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 11 LICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 68
L+ +I+ P I+ + G +G G+ ++ HGR KT+L +PE +GL P G +
Sbjct: 93 LMAEINALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGT 152
Query: 69 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 128
+ G S + +TGK++ AL GL D VP L EA + + + P
Sbjct: 153 QRLPRLI-GVSTALEMILTGKQLRA-KQALKLGLVDDVVPH---SILLEAAVELAKKDRP 207
Query: 129 HQDIVALLAKYSSDPEGEAPL 149
+ + + + P G A L
Sbjct: 208 SSRPLPVRERILAGPLGRALL 228
>sp|Q7N288|FADJ_PHOLL Fatty acid oxidation complex subunit alpha OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=fadJ PE=3
SV=2
Length = 727
Score = 38.1 bits (87), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 11 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFS 68
L +I+ Y P ++ + G +G G+ ++ +R+ ++ KT L +PE +GL P G +
Sbjct: 108 LFSQIANYPLPVVAAIHGACLGGGLELALACHWRVCSQDDKTRLGLPEVQLGLLPGSGGT 167
Query: 69 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVP 108
+ G S + +TGK++ AL GL D VP
Sbjct: 168 QRLPRLIGVSSALDIM-LTGKQLRA-KQALRLGLVDDAVP 205
>sp|Q5QXM1|FADJ_IDILO Fatty acid oxidation complex subunit alpha OS=Idiomarina loihiensis
(strain ATCC BAA-735 / DSM 15497 / L2-TR) GN=fadJ PE=3
SV=1
Length = 708
Score = 37.7 bits (86), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 10 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGF 67
++ +I + P ++ ++G +G G+ ++ R+ T+ KT L +PE +GL P G
Sbjct: 92 AMFDRIEQLNVPVVAAINGACLGGGLELAMACHVRVCTDNSKTALGLPEVKLGLLPGSGG 151
Query: 68 SYIAAKGPG--GGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNL 112
+ + P G G + +TGK + AL AGL T+ VP L
Sbjct: 152 T---QRLPELVGVQQGLTMILTGKELRA-KQALKAGLVTEVVPQSIL 194
>sp|Q8FFG4|FADJ_ECOL6 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fadJ PE=3
SV=1
Length = 714
Score = 37.7 bits (86), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 11 LICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 68
L+ +I P I+ + G +G G+ ++ HGR KT+L +PE +GL P G +
Sbjct: 93 LMAEIHALPVPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGT 152
Query: 69 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 128
+ G S + +TGK++ AL GL D VP L EA + + + P
Sbjct: 153 QRLPRLI-GVSTALEMILTGKQLRA-KQALKLGLVDDVVPH---SILLEAAVELAKQDRP 207
Query: 129 HQDIVALLAKYSSDPEGEAPL 149
+ + + + P G A L
Sbjct: 208 SSRPLPVRERILAGPLGRALL 228
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,168,391
Number of Sequences: 539616
Number of extensions: 4791244
Number of successful extensions: 9823
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 9715
Number of HSP's gapped (non-prelim): 220
length of query: 293
length of database: 191,569,459
effective HSP length: 116
effective length of query: 177
effective length of database: 128,974,003
effective search space: 22828398531
effective search space used: 22828398531
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)