Query 022721
Match_columns 293
No_of_seqs 155 out of 1573
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 05:40:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022721.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022721hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1684 Enoyl-CoA hydratase [L 100.0 1.8E-57 3.9E-62 413.9 20.5 275 2-293 118-393 (401)
2 PLN02851 3-hydroxyisobutyryl-C 100.0 7.2E-55 1.6E-59 415.0 29.5 273 2-292 121-397 (407)
3 PLN02988 3-hydroxyisobutyryl-C 100.0 2.7E-54 5.9E-59 409.5 27.3 266 3-286 89-358 (381)
4 PLN02157 3-hydroxyisobutyryl-C 100.0 6E-53 1.3E-57 401.8 28.3 272 3-292 117-392 (401)
5 PLN02874 3-hydroxyisobutyryl-C 100.0 4E-49 8.6E-54 375.0 26.8 269 5-292 91-363 (379)
6 PRK05617 3-hydroxyisobutyryl-C 100.0 2.9E-49 6.3E-54 371.5 23.7 259 3-283 84-342 (342)
7 PLN02600 enoyl-CoA hydratase 100.0 8.2E-37 1.8E-41 275.9 20.2 180 3-267 72-251 (251)
8 PRK09076 enoyl-CoA hydratase; 100.0 1.1E-36 2.5E-41 276.0 20.9 178 4-266 80-257 (258)
9 PRK05862 enoyl-CoA hydratase; 100.0 2E-36 4.4E-41 274.2 20.5 178 5-267 80-257 (257)
10 PRK08150 enoyl-CoA hydratase; 100.0 2.2E-36 4.8E-41 273.7 20.5 177 5-266 78-254 (255)
11 PRK05980 enoyl-CoA hydratase; 100.0 2.1E-36 4.5E-41 274.5 19.2 177 3-264 84-260 (260)
12 PRK07658 enoyl-CoA hydratase; 100.0 2.7E-36 5.8E-41 273.3 19.6 178 4-266 79-256 (257)
13 PRK07657 enoyl-CoA hydratase; 100.0 3E-36 6.5E-41 273.5 19.9 180 3-267 81-260 (260)
14 PLN02664 enoyl-CoA hydratase/d 100.0 3.3E-36 7.2E-41 275.4 19.9 175 7-266 99-274 (275)
15 PRK05809 3-hydroxybutyryl-CoA 100.0 4.1E-36 8.9E-41 272.6 19.9 179 4-267 82-260 (260)
16 TIGR02280 PaaB1 phenylacetate 100.0 6E-36 1.3E-40 271.0 20.1 173 9-266 83-255 (256)
17 PRK06127 enoyl-CoA hydratase; 100.0 4.9E-36 1.1E-40 273.4 19.6 179 4-267 91-269 (269)
18 PRK06142 enoyl-CoA hydratase; 100.0 4.8E-36 1E-40 273.9 19.4 175 7-266 97-272 (272)
19 PRK09674 enoyl-CoA hydratase-i 100.0 8E-36 1.7E-40 270.0 19.8 174 8-266 81-254 (255)
20 PRK08258 enoyl-CoA hydratase; 100.0 7.8E-36 1.7E-40 273.2 19.9 178 4-266 98-276 (277)
21 PRK09245 enoyl-CoA hydratase; 100.0 7.2E-36 1.6E-40 271.8 19.3 174 8-266 92-265 (266)
22 PRK08138 enoyl-CoA hydratase; 100.0 1.1E-35 2.5E-40 269.9 20.1 178 4-266 83-260 (261)
23 PRK08139 enoyl-CoA hydratase; 100.0 1.4E-35 3.1E-40 270.0 20.8 177 4-266 89-265 (266)
24 PRK07799 enoyl-CoA hydratase; 100.0 1.4E-35 3E-40 269.6 20.0 170 13-267 94-263 (263)
25 PRK08140 enoyl-CoA hydratase; 100.0 2.2E-35 4.7E-40 268.1 20.3 172 10-266 90-261 (262)
26 PRK07659 enoyl-CoA hydratase; 100.0 1.3E-35 2.9E-40 269.3 18.6 179 3-267 82-260 (260)
27 PRK03580 carnitinyl-CoA dehydr 100.0 2.5E-35 5.5E-40 267.6 19.8 173 9-266 84-260 (261)
28 PRK05981 enoyl-CoA hydratase; 100.0 2.3E-35 4.9E-40 268.6 19.5 175 7-266 91-265 (266)
29 PRK06494 enoyl-CoA hydratase; 100.0 1.9E-35 4.2E-40 268.1 18.9 169 14-267 89-259 (259)
30 PRK06563 enoyl-CoA hydratase; 100.0 1.8E-35 4E-40 267.6 18.7 168 14-266 87-254 (255)
31 PRK07511 enoyl-CoA hydratase; 100.0 3.2E-35 6.8E-40 266.8 20.2 177 4-265 83-259 (260)
32 PRK08252 enoyl-CoA hydratase; 100.0 4.1E-35 9E-40 265.2 20.2 166 16-266 88-253 (254)
33 PRK07468 enoyl-CoA hydratase; 100.0 3.9E-35 8.6E-40 266.5 19.3 176 5-266 86-261 (262)
34 PRK05995 enoyl-CoA hydratase; 100.0 4.1E-35 9E-40 266.3 19.0 176 6-267 86-262 (262)
35 PRK06688 enoyl-CoA hydratase; 100.0 4.1E-35 8.8E-40 265.8 18.6 178 4-266 81-258 (259)
36 TIGR01929 menB naphthoate synt 100.0 7.7E-35 1.7E-39 264.2 17.8 172 9-266 87-258 (259)
37 PRK06210 enoyl-CoA hydratase; 100.0 8.6E-35 1.9E-39 265.6 18.2 173 9-266 98-271 (272)
38 PRK08260 enoyl-CoA hydratase; 100.0 9.9E-35 2.1E-39 268.3 18.6 175 9-267 103-278 (296)
39 PRK11423 methylmalonyl-CoA dec 100.0 1.1E-34 2.4E-39 263.5 18.2 180 4-267 81-261 (261)
40 PRK05674 gamma-carboxygeranoyl 100.0 9.9E-35 2.1E-39 264.3 17.8 174 7-266 89-263 (265)
41 PRK07327 enoyl-CoA hydratase; 100.0 1.6E-34 3.4E-39 263.4 18.8 177 4-266 91-267 (268)
42 KOG1680 Enoyl-CoA hydratase [L 100.0 3E-35 6.4E-40 261.2 13.6 172 10-266 118-289 (290)
43 PRK05864 enoyl-CoA hydratase; 100.0 1.9E-34 4.1E-39 263.9 19.1 177 6-267 96-275 (276)
44 PRK06495 enoyl-CoA hydratase; 100.0 2E-34 4.3E-39 261.2 19.0 174 5-266 83-256 (257)
45 PRK06143 enoyl-CoA hydratase; 100.0 2.9E-34 6.4E-39 260.0 18.9 170 4-258 85-254 (256)
46 TIGR03189 dienoyl_CoA_hyt cycl 100.0 3.5E-34 7.7E-39 258.8 19.2 176 4-267 74-251 (251)
47 TIGR03210 badI 2-ketocyclohexa 100.0 4E-34 8.7E-39 259.1 19.1 172 8-266 83-255 (256)
48 PRK09120 p-hydroxycinnamoyl Co 100.0 4.7E-34 1E-38 261.2 19.7 168 7-258 92-262 (275)
49 PRK07509 enoyl-CoA hydratase; 100.0 6E-34 1.3E-38 258.6 19.6 170 9-265 92-261 (262)
50 PRK07854 enoyl-CoA hydratase; 100.0 4.6E-34 9.9E-39 256.9 18.3 172 4-266 71-242 (243)
51 PRK07396 dihydroxynaphthoic ac 100.0 4.4E-34 9.6E-39 261.1 18.4 172 9-266 97-268 (273)
52 PRK07260 enoyl-CoA hydratase; 100.0 5.9E-34 1.3E-38 257.8 18.0 170 5-258 84-253 (255)
53 PRK06144 enoyl-CoA hydratase; 100.0 6.4E-34 1.4E-38 258.6 18.2 174 4-266 87-261 (262)
54 PRK06072 enoyl-CoA hydratase; 100.0 2.1E-33 4.4E-38 253.3 20.3 174 5-267 75-248 (248)
55 PRK07938 enoyl-CoA hydratase; 100.0 1.1E-33 2.4E-38 255.2 18.1 169 6-262 81-249 (249)
56 PF00378 ECH: Enoyl-CoA hydrat 100.0 5.2E-34 1.1E-38 256.4 15.6 173 2-258 73-245 (245)
57 COG1024 CaiD Enoyl-CoA hydrata 100.0 2.1E-33 4.6E-38 254.4 18.6 175 3-264 82-257 (257)
58 PRK07827 enoyl-CoA hydratase; 100.0 2E-33 4.4E-38 255.0 18.2 174 4-265 86-259 (260)
59 PLN02888 enoyl-CoA hydratase 100.0 3.1E-33 6.6E-38 254.5 19.0 173 9-266 89-263 (265)
60 PLN02921 naphthoate synthase 100.0 2.5E-33 5.4E-38 261.7 18.5 172 9-266 151-322 (327)
61 PRK08321 naphthoate synthase; 100.0 3.3E-33 7.1E-38 258.8 18.6 172 10-267 126-298 (302)
62 PRK07112 polyketide biosynthes 100.0 4.2E-33 9E-38 252.3 17.9 172 6-266 83-254 (255)
63 PLN03214 probable enoyl-CoA hy 100.0 3.2E-33 6.9E-38 256.1 16.4 167 8-258 96-263 (278)
64 PRK06023 enoyl-CoA hydratase; 100.0 4.7E-33 1E-37 251.4 17.3 169 5-258 83-251 (251)
65 PRK05870 enoyl-CoA hydratase; 100.0 3.9E-33 8.5E-38 251.6 16.4 167 4-255 80-247 (249)
66 PRK08259 enoyl-CoA hydratase; 100.0 5.4E-33 1.2E-37 251.5 16.7 163 15-262 89-251 (254)
67 PRK12478 enoyl-CoA hydratase; 100.0 1.5E-32 3.2E-37 253.9 16.9 170 11-268 104-282 (298)
68 TIGR03222 benzo_boxC benzoyl-C 100.0 4.4E-32 9.6E-37 267.2 18.4 174 9-267 355-544 (546)
69 PRK08184 benzoyl-CoA-dihydrodi 100.0 4.7E-32 1E-36 267.6 17.7 175 8-267 358-548 (550)
70 PRK07110 polyketide biosynthes 100.0 2.5E-31 5.3E-36 240.0 17.9 164 9-255 84-247 (249)
71 PRK06190 enoyl-CoA hydratase; 100.0 3.8E-30 8.3E-35 233.3 18.0 154 8-244 83-236 (258)
72 KOG1679 Enoyl-CoA hydratase [L 100.0 9.7E-31 2.1E-35 224.2 8.1 184 3-267 108-291 (291)
73 PRK11730 fadB multifunctional 100.0 3.9E-29 8.5E-34 255.0 18.1 211 3-258 86-297 (715)
74 PRK11154 fadJ multifunctional 100.0 1.1E-28 2.4E-33 251.6 18.7 206 4-258 86-294 (708)
75 PRK05869 enoyl-CoA hydratase; 100.0 1.5E-28 3.3E-33 218.2 15.4 136 5-214 85-220 (222)
76 PRK06213 enoyl-CoA hydratase; 100.0 1.9E-28 4.1E-33 218.5 14.9 152 3-237 75-227 (229)
77 PRK08788 enoyl-CoA hydratase; 100.0 5.4E-28 1.2E-32 222.1 17.0 155 17-255 119-274 (287)
78 TIGR02440 FadJ fatty oxidation 100.0 1.1E-27 2.3E-32 244.0 20.9 204 5-258 82-289 (699)
79 PRK08290 enoyl-CoA hydratase; 100.0 7.5E-28 1.6E-32 221.6 15.8 155 8-246 107-262 (288)
80 TIGR03200 dearomat_oah 6-oxocy 100.0 3.1E-27 6.8E-32 220.4 17.0 216 4-258 109-328 (360)
81 KOG1681 Enoyl-CoA isomerase [L 99.9 1.9E-28 4.1E-33 211.9 7.1 180 2-265 109-290 (292)
82 TIGR02437 FadB fatty oxidation 99.9 6.4E-27 1.4E-31 238.5 17.2 210 4-258 87-297 (714)
83 PRK08272 enoyl-CoA hydratase; 99.9 2.5E-26 5.5E-31 212.8 15.1 133 5-214 113-245 (302)
84 PF13766 ECH_C: 2-enoyl-CoA Hy 99.9 1.7E-26 3.7E-31 185.5 11.2 117 149-282 2-118 (118)
85 KOG1682 Enoyl-CoA isomerase [L 99.9 1.6E-25 3.5E-30 190.8 12.8 178 3-266 109-286 (287)
86 TIGR02441 fa_ox_alpha_mit fatt 99.9 5.3E-25 1.1E-29 225.1 17.3 213 4-258 93-321 (737)
87 PLN02267 enoyl-CoA hydratase/i 99.9 7.1E-25 1.5E-29 196.8 14.8 108 4-114 79-190 (239)
88 KOG0016 Enoyl-CoA hydratase/is 99.9 2.2E-24 4.7E-29 190.3 13.9 169 7-258 95-263 (266)
89 COG0447 MenB Dihydroxynaphthoi 99.9 2.6E-25 5.5E-30 191.2 6.4 171 8-265 105-276 (282)
90 cd06558 crotonase-like Crotona 99.9 1.2E-23 2.5E-28 182.1 12.1 118 2-121 76-193 (195)
91 TIGR03222 benzo_boxC benzoyl-C 99.9 8.6E-22 1.9E-26 194.4 12.6 110 11-122 111-225 (546)
92 PRK08184 benzoyl-CoA-dihydrodi 99.9 1.5E-21 3.3E-26 193.2 12.4 109 11-121 115-228 (550)
93 cd07020 Clp_protease_NfeD_1 No 99.6 4.1E-16 9E-21 135.0 9.0 104 9-114 48-171 (187)
94 cd07014 S49_SppA Signal peptid 99.5 5.7E-14 1.2E-18 120.5 7.3 105 7-113 59-173 (177)
95 cd07016 S14_ClpP_1 Caseinolyti 99.3 6.3E-12 1.4E-16 105.9 9.7 98 8-106 47-160 (160)
96 cd00394 Clp_protease_like Case 98.9 5E-09 1.1E-13 88.1 9.6 98 8-106 46-161 (161)
97 cd07021 Clp_protease_NfeD_like 98.9 1.2E-08 2.6E-13 87.7 9.6 101 7-108 46-170 (178)
98 TIGR00705 SppA_67K signal pept 98.9 3.8E-09 8.3E-14 106.2 7.4 106 8-117 367-516 (584)
99 cd07019 S49_SppA_1 Signal pept 98.8 8.1E-09 1.8E-13 91.1 5.8 47 7-53 58-104 (211)
100 cd07022 S49_Sppa_36K_type Sign 98.6 1.4E-07 3E-12 83.4 8.4 45 10-54 62-108 (214)
101 TIGR00706 SppA_dom signal pept 98.6 5.3E-07 1.1E-11 79.3 10.2 48 7-54 47-96 (207)
102 cd07023 S49_Sppa_N_C Signal pe 98.5 7.2E-07 1.6E-11 78.4 9.5 47 8-54 55-101 (208)
103 PRK12319 acetyl-CoA carboxylas 98.3 1.7E-05 3.6E-10 72.0 13.5 92 6-109 123-214 (256)
104 cd07015 Clp_protease_NfeD Nodu 98.2 1.2E-05 2.6E-10 68.7 9.8 101 8-109 47-165 (172)
105 PRK00277 clpP ATP-dependent Cl 98.2 5.4E-06 1.2E-10 72.6 7.3 100 9-109 79-196 (200)
106 TIGR00513 accA acetyl-CoA carb 98.0 0.00011 2.3E-09 68.5 13.0 92 6-109 176-267 (316)
107 PRK05724 acetyl-CoA carboxylas 98.0 0.00012 2.6E-09 68.2 13.2 92 6-109 176-267 (319)
108 CHL00198 accA acetyl-CoA carbo 98.0 0.00012 2.7E-09 68.1 12.7 91 7-109 180-270 (322)
109 PLN03230 acetyl-coenzyme A car 98.0 0.00022 4.7E-09 68.3 14.5 91 7-109 247-337 (431)
110 cd07018 S49_SppA_67K_type Sign 97.9 4.9E-05 1.1E-09 67.5 8.6 48 7-55 66-113 (222)
111 cd07013 S14_ClpP Caseinolytic 97.9 7.8E-05 1.7E-09 63.1 9.4 97 9-106 48-162 (162)
112 PLN03229 acetyl-coenzyme A car 97.9 0.00025 5.5E-09 71.9 14.1 92 6-109 267-358 (762)
113 PRK12553 ATP-dependent Clp pro 97.9 0.00012 2.5E-09 64.6 9.9 101 8-109 82-202 (207)
114 PRK14512 ATP-dependent Clp pro 97.8 0.00017 3.7E-09 63.0 10.5 100 9-109 71-188 (197)
115 cd07017 S14_ClpP_2 Caseinolyti 97.7 0.00011 2.3E-09 62.7 7.2 97 9-106 57-171 (171)
116 PF00574 CLP_protease: Clp pro 97.7 7.6E-05 1.6E-09 64.1 6.3 101 8-109 63-181 (182)
117 CHL00028 clpP ATP-dependent Cl 97.7 0.00035 7.5E-09 61.2 9.8 102 8-110 77-197 (200)
118 PRK14514 ATP-dependent Clp pro 97.6 0.00034 7.5E-09 62.1 8.4 100 9-109 102-219 (221)
119 TIGR00493 clpP ATP-dependent C 97.5 0.00056 1.2E-08 59.5 9.3 99 9-108 74-190 (191)
120 TIGR03133 malonate_beta malona 97.4 0.0013 2.8E-08 60.2 10.8 84 14-110 132-218 (274)
121 PRK14513 ATP-dependent Clp pro 97.4 0.0011 2.3E-08 58.2 9.4 103 8-111 74-194 (201)
122 PRK12551 ATP-dependent Clp pro 97.2 0.0022 4.8E-08 56.0 9.3 102 8-110 72-191 (196)
123 TIGR03134 malonate_gamma malon 97.1 0.0038 8.2E-08 56.1 9.6 91 10-111 95-191 (238)
124 TIGR00515 accD acetyl-CoA carb 96.9 0.006 1.3E-07 56.2 9.0 92 11-121 185-277 (285)
125 PRK12552 ATP-dependent Clp pro 96.8 0.0056 1.2E-07 54.4 8.3 99 9-109 97-214 (222)
126 COG0740 ClpP Protease subunit 96.7 0.011 2.4E-07 51.6 9.1 100 9-111 75-194 (200)
127 PRK11778 putative inner membra 96.7 0.012 2.5E-07 55.4 9.4 44 11-54 146-189 (330)
128 PRK05654 acetyl-CoA carboxylas 96.6 0.0078 1.7E-07 55.7 7.8 92 11-121 186-278 (292)
129 PRK07189 malonate decarboxylas 96.6 0.0057 1.2E-07 56.7 6.6 40 14-54 141-182 (301)
130 PRK10949 protease 4; Provision 96.5 0.015 3.2E-07 59.3 9.7 46 9-54 386-431 (618)
131 CHL00174 accD acetyl-CoA carbo 96.4 0.021 4.5E-07 52.8 9.4 85 17-120 205-290 (296)
132 PF01972 SDH_sah: Serine dehyd 96.1 0.015 3.3E-07 52.9 6.6 59 7-65 106-164 (285)
133 TIGR01117 mmdA methylmalonyl-C 95.7 0.048 1E-06 54.4 8.7 105 6-118 375-490 (512)
134 KOG1683 Hydroxyacyl-CoA dehydr 95.7 0.0061 1.3E-07 57.5 2.1 104 3-109 132-240 (380)
135 COG0825 AccA Acetyl-CoA carbox 95.6 0.098 2.1E-06 48.0 9.4 88 10-109 179-266 (317)
136 PF01039 Carboxyl_trans: Carbo 94.5 0.08 1.7E-06 52.6 6.2 78 8-110 121-206 (493)
137 PLN02820 3-methylcrotonyl-CoA 94.4 0.1 2.2E-06 52.7 6.9 79 13-110 199-280 (569)
138 PF01343 Peptidase_S49: Peptid 94.3 0.06 1.3E-06 44.9 4.2 40 15-54 2-41 (154)
139 TIGR01117 mmdA methylmalonyl-C 94.2 0.13 2.8E-06 51.4 7.0 74 18-110 153-229 (512)
140 PLN02157 3-hydroxyisobutyryl-C 94.2 0.082 1.8E-06 51.2 5.4 67 191-269 229-298 (401)
141 COG0616 SppA Periplasmic serin 93.6 0.13 2.8E-06 48.3 5.4 49 9-58 119-167 (317)
142 COG1030 NfeD Membrane-bound se 91.9 0.74 1.6E-05 44.7 8.1 109 6-117 72-194 (436)
143 COG4799 Acetyl-CoA carboxylase 91.7 0.15 3.2E-06 50.7 3.2 42 8-50 153-194 (526)
144 PLN02820 3-methylcrotonyl-CoA 90.9 1.1 2.4E-05 45.4 8.6 105 4-116 424-547 (569)
145 COG0777 AccD Acetyl-CoA carbox 89.4 2.4 5.1E-05 38.9 8.5 88 11-118 187-276 (294)
146 PF01039 Carboxyl_trans: Carbo 89.1 0.68 1.5E-05 46.1 5.4 105 5-117 353-472 (493)
147 KOG0840 ATP-dependent Clp prot 85.9 1 2.2E-05 40.7 4.0 92 10-108 141-256 (275)
148 TIGR00705 SppA_67K signal pept 83.5 11 0.00023 38.5 10.6 46 6-52 113-158 (584)
149 PRK10949 protease 4; Provision 79.7 10 0.00022 38.9 8.9 46 7-53 133-178 (618)
150 PF06744 DUF1215: Protein of u 50.7 88 0.0019 24.8 7.2 24 260-284 54-77 (125)
151 COG4565 CitB Response regulato 50.1 95 0.002 27.6 7.7 59 62-121 56-116 (224)
152 smart00250 PLEC Plectin repeat 45.9 17 0.00036 22.7 1.8 18 87-105 18-35 (38)
153 COG4799 Acetyl-CoA carboxylase 43.1 21 0.00045 35.9 2.9 107 5-114 383-499 (526)
154 PF01343 Peptidase_S49: Peptid 42.9 8.4 0.00018 31.9 0.1 27 85-112 117-143 (154)
155 KOG0540 3-Methylcrotonyl-CoA c 41.9 45 0.00098 32.9 4.8 97 7-116 410-514 (536)
156 PF06833 MdcE: Malonate decarb 35.1 79 0.0017 28.4 5.0 97 4-111 90-189 (234)
157 PF00681 Plectin: Plectin repe 31.6 19 0.00042 23.4 0.4 19 86-105 17-35 (45)
158 PF12295 Symplekin_C: Sympleki 30.4 2.6E+02 0.0057 23.9 7.4 120 137-284 61-182 (183)
159 PTZ00293 thymidine kinase; Pro 25.3 1.6E+02 0.0035 26.0 5.2 43 3-45 87-134 (211)
160 PF09713 A_thal_3526: Plant pr 22.2 1.7E+02 0.0037 20.1 3.7 43 154-200 3-45 (54)
161 KOG4391 Predicted alpha/beta h 21.0 12 0.00026 33.5 -2.6 91 19-115 147-243 (300)
No 1
>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=1.8e-57 Score=413.95 Aligned_cols=275 Identities=50% Similarity=0.826 Sum_probs=257.5
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHH
Q 022721 2 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 81 (293)
Q Consensus 2 ~~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a 81 (293)
+.||+.+|.+.+.|..+.||.||++||..||||++|+.+..||||||++.|+|||+.||++||+|++++|+|++| .+|
T Consensus 118 ~~fF~~eYsl~~~igtY~KP~ValmdGITMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfPDVG~Sy~lsrlpg--~lg 195 (401)
T KOG1684|consen 118 KKFFTEEYSLNHLIGTYLKPYVALMDGITMGGGVGLSVHGRFRVATERTVFAMPETGIGLFPDVGASYFLSRLPG--YLG 195 (401)
T ss_pred HHHHHHHHHHHHHHHHhcCceEEEeeceeecCCcceeecceeEEeeccceecccccccccccCccceeehhhCcc--HHH
Confidence 679999999999999999999999999999999999999999999999999999999999999999999999999 699
Q ss_pred HHHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCC-CchhccchhHHHhhh
Q 022721 82 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEG-EAPLKLLLPQITSCF 160 (293)
Q Consensus 82 ~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~i~~~f 160 (293)
.||+|||++++ |.||++.||++|+|++++|....++|. ..+.++|...|++.|.+|.+...+ ...+....+.|+.||
T Consensus 196 ~YLgLTG~rl~-GaD~~~~GlATHyv~S~~l~~Lee~L~-~~l~~dp~~~I~~~l~~y~~~~~~~~~~~~~~~~~i~~~F 273 (401)
T KOG1684|consen 196 LYLGLTGQRLS-GADALRCGLATHYVPSEKLPSLEERLL-KNLNDDPQSVINETLEKYASPAKDESFSLSLKLDVINKCF 273 (401)
T ss_pred Hhhhhccceec-chHHHHhcchhhccchhhhhHHHHHHh-hhcCCCcHHHHHHHHHHhcccCCCccccchhhHHHHHHhh
Confidence 99999999999 899999999999999999999999998 347788889999999999998554 445677889999999
Q ss_pred CCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHh
Q 022721 161 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 240 (293)
Q Consensus 161 ~~~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~ 240 (293)
+++ |++||++.|++.+++.+ ..+||+++++.|...||.|+++|.++++.+. ..++.+++.+|+++..+
T Consensus 274 s~~-tVeeIie~lk~~q~~~~--~~ewak~tlk~L~k~SPtSLkvT~r~i~egs---------~~tl~~~l~~Eyr~s~~ 341 (401)
T KOG1684|consen 274 SAN-TVEEIIEALKNYQQSAD--GSEWAKETLKTLKKMSPTSLKVTLRQIREGS---------KQTLDQCLTMEYRLSLR 341 (401)
T ss_pred ccc-cHHHHHHHHHHHhhhhh--HHHHHHHHHHHHhhcCCchHHHHHHHHHhhh---------HHHHHHHHHHHHHHHHH
Confidence 998 99999999988765333 4899999999999999999999999999887 77999999999999999
Q ss_pred hCCCCcHHHHHHHHhhCCCCCCCCCCCCccCCCHHHHHhhhcCCCCCCCCCCC
Q 022721 241 SSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV 293 (293)
Q Consensus 241 ~~~~~d~~egv~a~lv~k~r~P~w~~~~~~~v~~~~v~~~~~~~~~~~~~~~~ 293 (293)
++.+.||.||+||.|+||+++|+|++.+++||++++|+.+|.|++. ..|||+
T Consensus 342 ~~~~~DF~EGvRA~LIDKd~~PKW~p~~l~~V~e~~Vdn~F~~~p~-~~eLkl 393 (401)
T KOG1684|consen 342 MLMRGDFCEGVRAVLIDKDQNPKWDPASLADVTEDEVDNYFKPLPS-KSELKL 393 (401)
T ss_pred HhhccchhhhhhheeecCCcCCCCCCcchhhcCHHHHHHhccCCCC-cccccC
Confidence 9999999999999999999999999999999999999999999776 788874
No 2
>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=7.2e-55 Score=414.99 Aligned_cols=273 Identities=35% Similarity=0.612 Sum_probs=242.1
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHH
Q 022721 2 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 81 (293)
Q Consensus 2 ~~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a 81 (293)
..||+.+|++.+.|..+|||+||++||+|+|||++|+++||+||||++++|+|||+++|++|++|++++|+|++| ..|
T Consensus 121 ~~~f~~~~~l~~~i~~~pKPvIA~v~G~amGGG~gLal~~D~rVate~a~famPE~~iGl~PdvG~s~~L~rl~g--~~g 198 (407)
T PLN02851 121 KLFFENLYKFVYLQGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQMGFHPDAGASYYLSRLPG--YLG 198 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEcCEEeeHHHHHHHhCCEEEEeCCceEecchhccCCCCCccHHHHHHHhcC--HHH
Confidence 458889999999999999999999999999999999999999999999999999999999999999999999999 489
Q ss_pred HHHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCC-CCCchhccchhHHHhhh
Q 022721 82 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP-EGEAPLKLLLPQITSCF 160 (293)
Q Consensus 82 ~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~~i~~~f 160 (293)
+||+|||++++ |+||+++||+|++||++++....+.+.+.. ..+...+..++.+|.... .....+....+.|++||
T Consensus 199 ~~L~LTG~~i~-a~eA~~~GLa~~~v~~~~l~~l~~~l~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~I~~~F 275 (407)
T PLN02851 199 EYLALTGQKLN-GVEMIACGLATHYCLNARLPLIEERLGKLL--TDDPAVIEDSLAQYGDLVYPDKSSVLHKIETIDKCF 275 (407)
T ss_pred HHHHHhCCcCC-HHHHHHCCCceeecCHhhHHHHHHHHHhhc--cCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHh
Confidence 99999999999 999999999999999999987777666542 345667899999997542 22345566689999999
Q ss_pred CCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHh
Q 022721 161 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 240 (293)
Q Consensus 161 ~~~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~ 240 (293)
+.. |+++|+++|+.+.... ..+||+++++.|.++||+|+++|++++++++ ..+++|+|++|+++..+
T Consensus 276 ~~~-sv~~I~~~L~~~~~~~---~~~wa~~~~~~l~~~SP~Sl~vt~~~~~~~~---------~~sl~e~l~~E~~l~~~ 342 (407)
T PLN02851 276 GHD-TVEEIIEALENEAASS---YDEWCKKALKKIKEASPLSLKVTLQSIREGR---------FQTLDQCLAREYRISLC 342 (407)
T ss_pred CCC-CHHHHHHHHHhccccc---chHHHHHHHHHHHhcCcHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHH
Confidence 988 9999999999753210 1479999999999999999999999999988 67999999999999999
Q ss_pred hC---CCCcHHHHHHHHhhCCCCCCCCCCCCccCCCHHHHHhhhcCCCCCCCCCC
Q 022721 241 SS---LRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELK 292 (293)
Q Consensus 241 ~~---~~~d~~egv~a~lv~k~r~P~w~~~~~~~v~~~~v~~~~~~~~~~~~~~~ 292 (293)
++ .++||.|||||.||||+++|+|++++++||+++.|+++|.|++....||+
T Consensus 343 ~~~~~~~~DF~EGVRA~LIDKd~~P~W~p~sl~~V~~~~v~~~f~~~~~~~~~l~ 397 (407)
T PLN02851 343 GVSKWVSGDFCEGVRARLVDKDFAPKWDPPSLGEVSKDMVDCYFTPLDESESELE 397 (407)
T ss_pred HHhcCccchHHHHHHHHhcCCCCCCCCCCCChhhCCHHHHHHHhCCCCCCccccc
Confidence 87 48999999999999999999999999999999999999999865222565
No 3
>PLN02988 3-hydroxyisobutyryl-CoA hydrolase
Probab=100.00 E-value=2.7e-54 Score=409.49 Aligned_cols=266 Identities=36% Similarity=0.658 Sum_probs=239.1
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHH
Q 022721 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 82 (293)
Q Consensus 3 ~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~ 82 (293)
.||+..|.+.+.|..+|||+||++||+|+|||++|+++||+||||++++|+|||+++|++|++|++++|+|++| ..++
T Consensus 89 ~~f~~~~~l~~~i~~~pKPvIa~v~G~a~GGG~~Lal~~D~rvate~a~f~mPE~~iGl~Pd~G~s~~L~rl~G--~~~~ 166 (381)
T PLN02988 89 NFFSDEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPG--FFGE 166 (381)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEecCeEeehhhHHhhcCCeEEEcCCcEEeChhhhcCcCCCccHHHHHHHHHH--HHHH
Confidence 46777888888999999999999999999999999999999999999999999999999999999999999999 4899
Q ss_pred HHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCC-CCchhccchhHHHhhhC
Q 022721 83 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPE-GEAPLKLLLPQITSCFS 161 (293)
Q Consensus 83 ~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~l~~~~~~i~~~f~ 161 (293)
||+|||++++ |.||+++||+|++||++++.+...++++. ...++..+..++..|...+. ....+....+.|++||+
T Consensus 167 ~l~LTG~~i~-a~eA~~~GLv~~vv~~~~l~~~~~~la~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~f~ 243 (381)
T PLN02988 167 YVGLTGARLD-GAEMLACGLATHFVPSTRLTALEADLCRI--GSNDPTFASTILDAYTQHPRLKPQSAYHRLDVIDRCFS 243 (381)
T ss_pred HHHHcCCCCC-HHHHHHcCCceEecCHhHHHHHHHHHHHh--hccCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHhC
Confidence 9999999999 99999999999999999999999988743 34556678888888876542 12344456899999999
Q ss_pred CCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhh
Q 022721 162 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 241 (293)
Q Consensus 162 ~~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~ 241 (293)
.. |+++|+++|+.+.+..+ .+|++++++.|.++||+|+++|++++++++ ..++.|+|++|+++..++
T Consensus 244 ~~-~~~~i~~~L~~~~~~~~---~~wa~~~~~~l~~~sP~sl~vt~~~~~~~~---------~~sl~e~~~~e~~~~~~~ 310 (381)
T PLN02988 244 RR-TVEEIISALEREATQEA---DGWISATIQALKKASPASLKISLRSIREGR---------LQGVGQCLIREYRMVCHV 310 (381)
T ss_pred CC-CHHHHHHHHHhhccccc---cHHHHHHHHHHHhcCcHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHH
Confidence 88 99999999998532111 479999999999999999999999999988 669999999999999999
Q ss_pred CC---CCcHHHHHHHHhhCCCCCCCCCCCCccCCCHHHHHhhhcCCCC
Q 022721 242 SL---RSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 286 (293)
Q Consensus 242 ~~---~~d~~egv~a~lv~k~r~P~w~~~~~~~v~~~~v~~~~~~~~~ 286 (293)
+. ++||.|||||.||||+++|+|++++++||+++.|+++|+|++.
T Consensus 311 ~~~~~~~DF~EGVRA~LiDKd~~P~W~p~~l~~v~~~~v~~~f~~~~~ 358 (381)
T PLN02988 311 MKGEISKDFVEGCRAILVDKDKNPKWEPRRLEDMKDSMVEQYFERVEE 358 (381)
T ss_pred HhcCCCchHHHhHHHHhcCCCCCCCCCCCChhhCCHHHHHHHhCCCCc
Confidence 87 6999999999999999999999999999999999999999855
No 4
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=6e-53 Score=401.81 Aligned_cols=272 Identities=32% Similarity=0.591 Sum_probs=236.9
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHH
Q 022721 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 82 (293)
Q Consensus 3 ~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~ 82 (293)
.||+.+|.+.++|.++|||+||+|||+|+|||++|+++||+||||++++|+|||+++|++|++|++++|+|++| ..++
T Consensus 117 ~~~~~~~~l~~~i~~~pkPvIA~v~G~a~GGG~~Lal~cD~rvate~a~fa~PE~~iGl~Pd~G~s~~L~rl~G--~~a~ 194 (401)
T PLN02157 117 EFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPG--RLGE 194 (401)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeCeEeehhHHHHHhCCEEEEeCCCEEEChhhhcCCCCCccHHHHHHHhhh--HHHH
Confidence 47777888889999999999999999999999999999999999999999999999999999999999999999 4899
Q ss_pred HHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCC-CCchhccchhHHHhhhC
Q 022721 83 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPE-GEAPLKLLLPQITSCFS 161 (293)
Q Consensus 83 ~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~l~~~~~~i~~~f~ 161 (293)
||++||++++ |+||+++||+|++||++++++.. +++.. +...++..+..++..+..... ....+....+.|+.||.
T Consensus 195 ~L~LTG~~i~-A~eA~~~GLv~~vVp~~~l~~~~-~~~~~-i~~~~p~av~~~k~~~~~~~~~~~~~l~~~~~~i~~~f~ 271 (401)
T PLN02157 195 YLGLTGLKLS-GAEMLACGLATHYIRSEEIPVME-EQLKK-LLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFS 271 (401)
T ss_pred HHHHcCCcCC-HHHHHHcCCceEEeCHhHHHHHH-HHHHH-HHcCCHHHHHHHHHHHhcccCCcchhHHHHHHHHHHHhc
Confidence 9999999999 99999999999999999986555 44443 334566778888877754422 12344455789999999
Q ss_pred CCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhh
Q 022721 162 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 241 (293)
Q Consensus 162 ~~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~ 241 (293)
.. +++||+++|+.+.++.. .+|++++++.|.++||+|+++|++++++++ ..+++|+|++|+++..++
T Consensus 272 ~~-d~~ei~~al~~~~~kr~---~~wa~~~~~~l~~~sP~Sl~vt~~~~~~~~---------~~~l~e~~~~e~~~~~~~ 338 (401)
T PLN02157 272 HD-TVEEIIDSLEIEAGRRK---DTWCITTLRRLKESSPLSLKVALRSIREGR---------LQTLDQCLIREYRMSLQG 338 (401)
T ss_pred CC-CHHHHHHHHHhhhcccc---hHHHHHHHHHHHhcCcHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHHH
Confidence 88 99999999976432211 479999999999999999999999999988 669999999999999998
Q ss_pred CC---CCcHHHHHHHHhhCCCCCCCCCCCCccCCCHHHHHhhhcCCCCCCCCCC
Q 022721 242 SL---RSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELK 292 (293)
Q Consensus 242 ~~---~~d~~egv~a~lv~k~r~P~w~~~~~~~v~~~~v~~~~~~~~~~~~~~~ 292 (293)
+. ++||.|||||.||||+++|+|++++++||+++.|+++|.|+++..++|+
T Consensus 339 ~~~~~~~DF~EGVRA~LiDKd~~P~W~p~~l~~V~~~~v~~~f~~~~~~~~~l~ 392 (401)
T PLN02157 339 LIGPMSGNFCEGVRARLIDKDEAPKWDPPSLEKVSEDMVDDYFCALTPTEPDLD 392 (401)
T ss_pred HhcCCCchHHHHHHHHHcCCCCCCCCCCCChhhCCHHHHHHHhCCCCCCccccc
Confidence 75 6999999999999999999999999999999999999999974445665
No 5
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=4e-49 Score=374.96 Aligned_cols=269 Identities=33% Similarity=0.626 Sum_probs=232.9
Q ss_pred HHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHH
Q 022721 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 84 (293)
Q Consensus 5 ~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l 84 (293)
+...+.+..+|..++||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| . .+++|
T Consensus 91 ~~~~~~l~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g-~-~a~~l 168 (379)
T PLN02874 91 VYRMYWLCYHIHTYKKTQVALVHGLVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPG-H-LGEYL 168 (379)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCeEEecHHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhH-H-HHHHH
Confidence 344556678899999999999999999999999999999999999999999999999999999999999988 4 89999
Q ss_pred hhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCC-CCCchhccchhHHHhhhCCC
Q 022721 85 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP-EGEAPLKLLLPQITSCFSSE 163 (293)
Q Consensus 85 ~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~~i~~~f~~~ 163 (293)
+|||++++ |++|+++||||++||++++.+...++.+. ...+...+..++++|..+. .....+....+.|..||+..
T Consensus 169 ~ltG~~i~-a~eA~~~GLv~~vv~~~~l~~~~~~l~~l--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~f~~~ 245 (379)
T PLN02874 169 ALTGARLN-GKEMVACGLATHFVPSEKLPELEKRLLNL--NSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKD 245 (379)
T ss_pred HHcCCccc-HHHHHHcCCccEEeCHHHHHHHHHHHHhc--CCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHhCCC
Confidence 99999999 99999999999999999888755555432 2345677889999887653 23344555688999999988
Q ss_pred CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCC
Q 022721 164 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 243 (293)
Q Consensus 164 ~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~ 243 (293)
++.+|+++|+++.+... .+||.++++.|+++||+|++.+|++++++. ..+++++++.|++...+++.
T Consensus 246 -~~~eii~al~~~~~~~~---~~~A~~~a~~l~~~sP~al~~tk~~~~~~~---------~~~l~~~l~~e~~~~~~~~~ 312 (379)
T PLN02874 246 -TVEEIIKAFESEASKTG---NEWIKETLKGLRRSSPTGLKITLRSIREGR---------KQSLAECLKKEFRLTMNILR 312 (379)
T ss_pred -CHHHHHHHHhhcccccc---cHHHHHHHHHHHhcChHHHHHHHHHHHHhc---------cCCHHHHHHHHHHHHHHHHh
Confidence 99999999987543222 479999999999999999999999999877 66899999999999888777
Q ss_pred ---CCcHHHHHHHHhhCCCCCCCCCCCCccCCCHHHHHhhhcCCCCCCCCCC
Q 022721 244 ---RSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELK 292 (293)
Q Consensus 244 ---~~d~~egv~a~lv~k~r~P~w~~~~~~~v~~~~v~~~~~~~~~~~~~~~ 292 (293)
++||.|||++|+++|+|.|+|+++++++|++++|+++|.|++. +.||.
T Consensus 313 ~~~~~D~~EGv~AflidK~r~P~w~~~~~~~v~~~~v~~~f~~~~~-~~~~~ 363 (379)
T PLN02874 313 STVSDDVYEGIRALVIDKDNAPKWNPSTLDEVTDEKVDLVFQPFKA-REELQ 363 (379)
T ss_pred cCcCcchhhccceEEEcCCCCCCCCCCChhhCCHHHHHHHhCCCCC-ccccC
Confidence 9999999999988887899999999999999999999999754 43443
No 6
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=100.00 E-value=2.9e-49 Score=371.50 Aligned_cols=259 Identities=43% Similarity=0.750 Sum_probs=235.2
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHH
Q 022721 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 82 (293)
Q Consensus 3 ~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~ 82 (293)
.|++..+.++.++..+|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+++.| . .++
T Consensus 84 ~~~~~~~~~~~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g-~-~a~ 161 (342)
T PRK05617 84 RFFREEYRLNALIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPG-A-LGT 161 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEcCEEEccHhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhccc-H-HHH
Confidence 45556667888999999999999999999999999999999999999999999999999999999999999977 5 999
Q ss_pred HHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCC
Q 022721 83 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 162 (293)
Q Consensus 83 ~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~ 162 (293)
+|++||+.++ |+||+++||||++||+++++...+++.+.++ .+..+.+..++.+|..+.. ...+......|++||+.
T Consensus 162 ~llltG~~i~-A~eA~~~GLv~~vv~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~ 238 (342)
T PRK05617 162 YLALTGARIS-AADALYAGLADHFVPSADLPALLDALISLRW-DSGADVVDAALAAFATPAP-ASELAAQRAWIDECFAG 238 (342)
T ss_pred HHHHcCCCCC-HHHHHHcCCcceecCHHHHHHHHHHHHhcCC-ccchhHHHHHHHHhccCCC-cchhHHHHHHHHHHhCC
Confidence 9999999999 9999999999999999999888777777655 4555678889999876633 34788899999999998
Q ss_pred CCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhC
Q 022721 163 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 242 (293)
Q Consensus 163 ~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~ 242 (293)
. ++++|+++|+++. .+||.+++++|+++||.+++.+|+++++.. ..+++++++.|.+.+..++
T Consensus 239 ~-~~~~~~~~l~~~~-------~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~---------~~~l~~~~~~e~~~~~~~~ 301 (342)
T PRK05617 239 D-TVEDIIAALEADG-------GEFAAKTADTLRSRSPTSLKVTLEQLRRAR---------GLTLEECLRRELRLALAML 301 (342)
T ss_pred C-CHHHHHHHHHhcc-------HHHHHHHHHHHHhCCcHHHHHHHHHHHHhc---------CCCHHHHHHHHHHHHHHHH
Confidence 7 9999999999984 479999999999999999999999999877 6689999999999999999
Q ss_pred CCCcHHHHHHHHhhCCCCCCCCCCCCccCCCHHHHHhhhcC
Q 022721 243 LRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEP 283 (293)
Q Consensus 243 ~~~d~~egv~a~lv~k~r~P~w~~~~~~~v~~~~v~~~~~~ 283 (293)
.++|+.||+++|+++|.|.|+|+++++++|++++|+++|+|
T Consensus 302 ~~~d~~egv~afl~ek~r~p~~~~~~~~~~~~~~~~~~~~~ 342 (342)
T PRK05617 302 RSPDFVEGVRAVLIDKDRNPKWSPATLEDVTPEDVEAFFAP 342 (342)
T ss_pred hCCchhhccceEEEcCCCCCCCCCCChHhCCHHHHHHhhCC
Confidence 99999999999986654789999999999999999999987
No 7
>PLN02600 enoyl-CoA hydratase
Probab=100.00 E-value=8.2e-37 Score=275.93 Aligned_cols=180 Identities=20% Similarity=0.317 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHH
Q 022721 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 82 (293)
Q Consensus 3 ~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~ 82 (293)
.|++....++.+|..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. .++
T Consensus 72 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~-~a~ 150 (251)
T PLN02600 72 KFVNSLRSTFSSLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGRS-RAK 150 (251)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEecCeecchhHHHHHhCCEEEeeCCCEEeCcccccCcCCCchHHHHHHHHhCHH-HHH
Confidence 3555566788899999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCC
Q 022721 83 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 162 (293)
Q Consensus 83 ~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~ 162 (293)
+|++||++++ |+||+++||||++||++++.+.+
T Consensus 151 ~l~ltg~~~~-a~eA~~~Glv~~vv~~~~~~~~a---------------------------------------------- 183 (251)
T PLN02600 151 ELIFTGRRIG-AREAASMGLVNYCVPAGEAYEKA---------------------------------------------- 183 (251)
T ss_pred HHHHhCCccC-HHHHHHcCCCcEeeChhHHHHHH----------------------------------------------
Confidence 9999999999 99999999999999987665532
Q ss_pred CCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhC
Q 022721 163 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 242 (293)
Q Consensus 163 ~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~ 242 (293)
.++|+ +|++++|.+++.+|++++... ..++.+.++.|...+..++
T Consensus 184 ----------------------~~~a~----~la~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~ 228 (251)
T PLN02600 184 ----------------------LELAQ----EINQKGPLAIKMAKKAINEGS---------EVDMASGLEIEEECYEQVL 228 (251)
T ss_pred ----------------------HHHHH----HHHhCCHHHHHHHHHHHHHHc---------cCCHHHHHHHHHHHHHHHh
Confidence 34666 999999999999999999876 5689999999999999999
Q ss_pred CCCcHHHHHHHHhhCCCCCCCCCCC
Q 022721 243 LRSDFAEGVRAVLVDKDQNPKWNPA 267 (293)
Q Consensus 243 ~~~d~~egv~a~lv~k~r~P~w~~~ 267 (293)
.++|+.||+++|+ +| |+|+|+++
T Consensus 229 ~~~d~~eg~~af~-ek-r~p~~~~~ 251 (251)
T PLN02600 229 KTKDRLEGLAAFA-EK-RKPVYTGK 251 (251)
T ss_pred CCHHHHHHHHHHh-cC-CCCCCCCC
Confidence 9999999999999 89 89999763
No 8
>PRK09076 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-36 Score=275.99 Aligned_cols=178 Identities=21% Similarity=0.296 Sum_probs=162.5
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 83 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~ 83 (293)
+......++.+|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. .+++
T Consensus 80 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~-~a~~ 158 (258)
T PRK09076 80 MARRFGEAFEALSAFRGVSIAAINGYAMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGEG-WAKR 158 (258)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEecCCCEeeCcccccCCCCCccHHHHHHHHhCHH-HHHH
Confidence 334455678889999999999999999999999999999999999999999999999999999999999999997 9999
Q ss_pred HhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCC
Q 022721 84 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 163 (293)
Q Consensus 84 l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~ 163 (293)
|++||++++ |+||+++||+|++||++++.+.+
T Consensus 159 l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------------------------------------- 190 (258)
T PRK09076 159 MILCGERVD-AATALRIGLVEEVVEKGEAREAA----------------------------------------------- 190 (258)
T ss_pred HHHcCCcCC-HHHHHHCCCCceecCchhHHHHH-----------------------------------------------
Confidence 999999999 99999999999999987665532
Q ss_pred CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCC
Q 022721 164 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 243 (293)
Q Consensus 164 ~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~ 243 (293)
.++++ +|..+||.+++.+|++++... ..++++.++.|...+..++.
T Consensus 191 ---------------------~~~a~----~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~ 236 (258)
T PRK09076 191 ---------------------LALAQ----KVANQSPSAVAACKTLIQAAR---------NGPRAAALALERELFVDLFD 236 (258)
T ss_pred ---------------------HHHHH----HHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHHhc
Confidence 34666 899999999999999999876 56799999999999999999
Q ss_pred CCcHHHHHHHHhhCCCCCCCCCC
Q 022721 244 RSDFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 244 ~~d~~egv~a~lv~k~r~P~w~~ 266 (293)
++|++||+++|+ +| |+|+|++
T Consensus 237 ~~~~~eg~~af~-~k-r~p~~~~ 257 (258)
T PRK09076 237 TEDQREGVNAFL-EK-RAPQWKN 257 (258)
T ss_pred CchHHHHHHHHh-cC-CCCCCCC
Confidence 999999999999 88 8999975
No 9
>PRK05862 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2e-36 Score=274.18 Aligned_cols=178 Identities=20% Similarity=0.245 Sum_probs=162.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHH
Q 022721 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 84 (293)
Q Consensus 5 ~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l 84 (293)
....+.++.+|..+||||||++||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. .+++|
T Consensus 80 ~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l 158 (257)
T PRK05862 80 KGDYITNWEKVARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMGGSQRLTRAVGKA-KAMDL 158 (257)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEccEEeHHHHHHHHHCCEEEEeCCCEEeCchhccCcCCCccHHHHHHHHhCHH-HHHHH
Confidence 34455677889999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred hhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCC
Q 022721 85 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEK 164 (293)
Q Consensus 85 ~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~ 164 (293)
++||+.++ |+||+++||+|+++|++++.+.+
T Consensus 159 ~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a------------------------------------------------ 189 (257)
T PRK05862 159 CLTGRMMD-AAEAERAGLVSRVVPADKLLDEA------------------------------------------------ 189 (257)
T ss_pred HHhCCccC-HHHHHHcCCCCEeeCHhHHHHHH------------------------------------------------
Confidence 99999999 99999999999999987666543
Q ss_pred CHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCC
Q 022721 165 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLR 244 (293)
Q Consensus 165 t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~ 244 (293)
.++++ +|++.+|.+++.+|++++... ..+++++++.|.+.+..++.+
T Consensus 190 --------------------~~~a~----~l~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~~s 236 (257)
T PRK05862 190 --------------------LAAAT----TIASFSLPAVMMAKEAVNRAY---------ETTLAEGLLFERRLFHSLFAT 236 (257)
T ss_pred --------------------HHHHH----HHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHHhcC
Confidence 34666 889999999999999999876 568999999999999999999
Q ss_pred CcHHHHHHHHhhCCCCCCCCCCC
Q 022721 245 SDFAEGVRAVLVDKDQNPKWNPA 267 (293)
Q Consensus 245 ~d~~egv~a~lv~k~r~P~w~~~ 267 (293)
+|++||+++|+ +| |+|.|+++
T Consensus 237 ~~~~e~i~af~-~k-r~p~~~~~ 257 (257)
T PRK05862 237 EDQKEGMAAFV-EK-RKPVFKHR 257 (257)
T ss_pred hhHHHHHHHHh-cc-CCCCCCCC
Confidence 99999999999 89 89999863
No 10
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.2e-36 Score=273.71 Aligned_cols=177 Identities=21% Similarity=0.249 Sum_probs=162.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHH
Q 022721 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 84 (293)
Q Consensus 5 ~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l 84 (293)
+...++++.+|..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. .+++|
T Consensus 78 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~-~a~~l 156 (255)
T PRK08150 78 SRRWHRVFDKIQYGRVPVIAALHGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGVA-RMTDM 156 (255)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEeCCCEEeccccccCCCCCccHHHHHHHHhCHH-HHHHH
Confidence 44456778889999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred hhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCC
Q 022721 85 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEK 164 (293)
Q Consensus 85 ~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~ 164 (293)
++||++++ |+||+++||+|++||.+++.+.+
T Consensus 157 ~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a------------------------------------------------ 187 (255)
T PRK08150 157 MLTGRVYD-AQEGERLGLAQYLVPAGEALDKA------------------------------------------------ 187 (255)
T ss_pred HHcCCcCC-HHHHHHcCCccEeeCchHHHHHH------------------------------------------------
Confidence 99999999 99999999999999987766643
Q ss_pred CHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCC
Q 022721 165 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLR 244 (293)
Q Consensus 165 t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~ 244 (293)
.++|+ +|+++||.+++.+|++++... ..++++.+..|...+..++.+
T Consensus 188 --------------------~~~a~----~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~s 234 (255)
T PRK08150 188 --------------------MELAR----RIAQNAPLTNFAVLNALPRIA---------DMSADDGLFVESLMAAVAQSA 234 (255)
T ss_pred --------------------HHHHH----HHHhCCHHHHHHHHHHHHHhc---------cCCHHHHHHHHHHHHHHHhcC
Confidence 34666 999999999999999999876 567999999999888888999
Q ss_pred CcHHHHHHHHhhCCCCCCCCCC
Q 022721 245 SDFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 245 ~d~~egv~a~lv~k~r~P~w~~ 266 (293)
+|++||+++|+ +| |+|+|++
T Consensus 235 ~d~~eg~~af~-~k-r~p~~~~ 254 (255)
T PRK08150 235 PEAKERLRAFL-EK-KAAKVKP 254 (255)
T ss_pred HHHHHHHHHHh-cc-CCCCCCC
Confidence 99999999999 88 8999975
No 11
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.1e-36 Score=274.50 Aligned_cols=177 Identities=21% Similarity=0.295 Sum_probs=161.9
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHH
Q 022721 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 82 (293)
Q Consensus 3 ~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~ 82 (293)
.|++....++.+|..+|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. .++
T Consensus 84 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a~ 162 (260)
T PRK05980 84 DFVRRGQAMTARLEAFPKPVIAAVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRK-RAL 162 (260)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEcCEEEhhhhHHhHhCCEEEecCCCEecCcccccCCCCCchHhhHHHhhcCHH-HHH
Confidence 3445556678889999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCC
Q 022721 83 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 162 (293)
Q Consensus 83 ~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~ 162 (293)
+|++||++++ |+||+++||||++||++++.+.+
T Consensus 163 ~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a---------------------------------------------- 195 (260)
T PRK05980 163 ELLLTGDAFS-AERALEIGLVNAVVPHEELLPAA---------------------------------------------- 195 (260)
T ss_pred HHHHcCCccC-HHHHHHcCCCCcccCHHHHHHHH----------------------------------------------
Confidence 9999999999 99999999999999977665543
Q ss_pred CCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhC
Q 022721 163 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 242 (293)
Q Consensus 163 ~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~ 242 (293)
.++++ +|++.+|.+++.+|++++... ..++.++++.|...+..++
T Consensus 196 ----------------------~~~a~----~la~~~p~a~~~~K~~~~~~~---------~~~~~~~~~~e~~~~~~~~ 240 (260)
T PRK05980 196 ----------------------RALAR----RIIRHSPVAVAAILTAVTRGL---------NLSIAEGLLIESEQFARMA 240 (260)
T ss_pred ----------------------HHHHH----HHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHHh
Confidence 34666 899999999999999999876 5679999999999999999
Q ss_pred CCCcHHHHHHHHhhCCCCCCCC
Q 022721 243 LRSDFAEGVRAVLVDKDQNPKW 264 (293)
Q Consensus 243 ~~~d~~egv~a~lv~k~r~P~w 264 (293)
.++|+.||+.+|+ +| |+|+|
T Consensus 241 ~~~~~~e~~~af~-~k-r~p~~ 260 (260)
T PRK05980 241 GSADLREGLAAWI-ER-RRPAY 260 (260)
T ss_pred cChhHHHHHHHHh-cc-CCCCC
Confidence 9999999999999 88 88988
No 12
>PRK07658 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.7e-36 Score=273.28 Aligned_cols=178 Identities=21% Similarity=0.268 Sum_probs=162.7
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 83 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~ 83 (293)
++.....++.+|..+|||+||++||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. .+++
T Consensus 79 ~~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~ 157 (257)
T PRK07658 79 LAQLGQVTFERVEKFSKPVIAAIHGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGKA-KALE 157 (257)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCeeeeHHHHHHHhCCEEEecCCCcccCcccccCCCCCCcHHHHHHHHhCHH-HHHH
Confidence 344456678899999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCC
Q 022721 84 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 163 (293)
Q Consensus 84 l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~ 163 (293)
|++||++++ |+||+++||+|++||++++.+.+
T Consensus 158 l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------------------------------------- 189 (257)
T PRK07658 158 MMLTSEPIT-GAEALKWGLVNGVFPEETLLDDA----------------------------------------------- 189 (257)
T ss_pred HHHcCCCcC-HHHHHHcCCcCeecChhHHHHHH-----------------------------------------------
Confidence 999999999 99999999999999987766533
Q ss_pred CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCC
Q 022721 164 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 243 (293)
Q Consensus 164 ~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~ 243 (293)
.++++ +|.+.||.+++.+|++++... ..++++.++.|...+..++.
T Consensus 190 ---------------------~~~a~----~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~ 235 (257)
T PRK07658 190 ---------------------KKLAK----KIAGKSPATTRAVLELLQTTK---------SSSYYEGVKREAKIFGEVFT 235 (257)
T ss_pred ---------------------HHHHH----HHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHHhC
Confidence 34566 899999999999999999876 56799999999999999999
Q ss_pred CCcHHHHHHHHhhCCCCCCCCCC
Q 022721 244 RSDFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 244 ~~d~~egv~a~lv~k~r~P~w~~ 266 (293)
++|++||+++|+ +| |+|+|++
T Consensus 236 ~~~~~egi~af~-~k-r~p~~~~ 256 (257)
T PRK07658 236 SEDAKEGVQAFL-EK-RKPSFSG 256 (257)
T ss_pred CHHHHHHHHHHH-cC-CCCCCCC
Confidence 999999999999 88 8999975
No 13
>PRK07657 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3e-36 Score=273.54 Aligned_cols=180 Identities=21% Similarity=0.280 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHH
Q 022721 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 82 (293)
Q Consensus 3 ~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~ 82 (293)
.++..+..++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. .++
T Consensus 81 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~-~a~ 159 (260)
T PRK07657 81 HAVSLIRTTMEMVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVG-RAK 159 (260)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEcCEeechHHHHHHhCCEEEeeCCCEEcCchhccCcCCCccHHHHHHHHhCHH-HHH
Confidence 3455667788899999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCC
Q 022721 83 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 162 (293)
Q Consensus 83 ~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~ 162 (293)
+|++||++++ |+||+++||+|++||++++.+.+
T Consensus 160 ~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a---------------------------------------------- 192 (260)
T PRK07657 160 ELIYTGRRIS-AQEAKEIGLVEFVVPAHLLEEKA---------------------------------------------- 192 (260)
T ss_pred HHHHhCCCCC-HHHHHHcCCCCeecCHHHHHHHH----------------------------------------------
Confidence 9999999999 99999999999999987766643
Q ss_pred CCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhC
Q 022721 163 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 242 (293)
Q Consensus 163 ~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~ 242 (293)
.+|++ +|..++|.+++.+|++++... ..++.+.+..|...+..++
T Consensus 193 ----------------------~~~a~----~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~ 237 (260)
T PRK07657 193 ----------------------IEIAE----KIASNGPIAVRQAKEAISNGI---------QVDLHTGLQIEKQAYEGTI 237 (260)
T ss_pred ----------------------HHHHH----HHHhCCHHHHHHHHHHHHHhc---------cCCHHHHHHHHHHHHHHHh
Confidence 34666 899999999999999999876 5679999999999999999
Q ss_pred CCCcHHHHHHHHhhCCCCCCCCCCC
Q 022721 243 LRSDFAEGVRAVLVDKDQNPKWNPA 267 (293)
Q Consensus 243 ~~~d~~egv~a~lv~k~r~P~w~~~ 267 (293)
.++|+.||+++|+ +| |+|+|+++
T Consensus 238 ~~~~~~e~~~af~-~~-r~~~~~~~ 260 (260)
T PRK07657 238 PTKDRLEGLQAFK-EK-RKPMYKGE 260 (260)
T ss_pred cCHhHHHHHHHHh-cC-CCCCCCCC
Confidence 9999999999999 88 89999753
No 14
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
Probab=100.00 E-value=3.3e-36 Score=275.39 Aligned_cols=175 Identities=22% Similarity=0.271 Sum_probs=159.5
Q ss_pred HHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhh
Q 022721 7 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM 86 (293)
Q Consensus 7 ~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~l 86 (293)
....++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. .+++|++
T Consensus 99 ~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~A~~l~l 177 (275)
T PLN02664 99 FLQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVGYG-NAMELAL 177 (275)
T ss_pred HHHHHHHHHHhCCCCEEEEECCccccchHHHHHhCCEEEecCCCEeccHHHhhCCCCCccHHHHHHHHhCHH-HHHHHHH
Confidence 345677889999999999999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred cCCCCCCHHHHHHcCccceeccC-CChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCC
Q 022721 87 TGKRISTPSDALFAGLGTDYVPS-GNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKS 165 (293)
Q Consensus 87 tG~~l~~a~eA~~~Gl~~~~v~~-~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t 165 (293)
||+.++ |+||+++||||++||+ +++.+.+
T Consensus 178 tg~~~~-a~eA~~~GLv~~vv~~~~~l~~~~------------------------------------------------- 207 (275)
T PLN02664 178 TGRRFS-GSEAKELGLVSRVFGSKEDLDEGV------------------------------------------------- 207 (275)
T ss_pred hCCCCC-HHHHHHcCCCceeeCChhHHHHHH-------------------------------------------------
Confidence 999999 9999999999999985 5555432
Q ss_pred HHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCC
Q 022721 166 VRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRS 245 (293)
Q Consensus 166 ~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~ 245 (293)
.++|+ +|+++||.+++.+|++++... ..+++++++.|...+..++.++
T Consensus 208 -------------------~~~a~----~ia~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~~ 255 (275)
T PLN02664 208 -------------------RLIAE----GIAAKSPLAVTGTKAVLLRSR---------ELSVEQGLDYVATWNSAMLVSD 255 (275)
T ss_pred -------------------HHHHH----HHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHhccCh
Confidence 34566 999999999999999999876 5679999999999888899999
Q ss_pred cHHHHHHHHhhCCCCCCCCCC
Q 022721 246 DFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 246 d~~egv~a~lv~k~r~P~w~~ 266 (293)
|+.||+++|+ +| |+|.|.+
T Consensus 256 d~~eg~~af~-ek-r~p~~~~ 274 (275)
T PLN02664 256 DLNEAVSAQI-QK-RKPVFAK 274 (275)
T ss_pred hHHHHHHHHh-cc-CCCCCCC
Confidence 9999999999 88 8999975
No 15
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated
Probab=100.00 E-value=4.1e-36 Score=272.58 Aligned_cols=179 Identities=23% Similarity=0.280 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 83 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~ 83 (293)
+......++.+|..+|||+||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. .+++
T Consensus 82 ~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~va~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~ 160 (260)
T PRK05809 82 FGLLGNKVFRKLENLDKPVIAAINGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPG-KAKE 160 (260)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEcCeeecHHHHHHHhCCEEEeeCCCEEeCcccccCCCCCccHHHHHHHHhCHH-HHHH
Confidence 334445678889999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCC
Q 022721 84 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 163 (293)
Q Consensus 84 l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~ 163 (293)
|++||+.++ |+||+++||+|+++|++++.+.+
T Consensus 161 l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------------------------------------- 192 (260)
T PRK05809 161 LIYTGDMIN-AEEALRIGLVNKVVEPEKLMEEA----------------------------------------------- 192 (260)
T ss_pred HHHhCCCCC-HHHHHHcCCCCcccChHHHHHHH-----------------------------------------------
Confidence 999999999 99999999999999977655532
Q ss_pred CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCC
Q 022721 164 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 243 (293)
Q Consensus 164 ~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~ 243 (293)
.++++ +|++.||.+++.+|+++++.. ..+++++++.|.+.+..++.
T Consensus 193 ---------------------~~~a~----~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~ 238 (260)
T PRK05809 193 ---------------------KALAN----KIAANAPIAVKLCKDAINRGM---------QVDIDTAVAIEAEDFGECFS 238 (260)
T ss_pred ---------------------HHHHH----HHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHHhc
Confidence 34666 899999999999999999877 56899999999999999999
Q ss_pred CCcHHHHHHHHhhCCCCCCCCCCC
Q 022721 244 RSDFAEGVRAVLVDKDQNPKWNPA 267 (293)
Q Consensus 244 ~~d~~egv~a~lv~k~r~P~w~~~ 267 (293)
++|+.||+++|+ +| |+|+|.++
T Consensus 239 ~~~~~egi~af~-~~-r~p~~~~~ 260 (260)
T PRK05809 239 TEDQTEGMTAFV-EK-REKNFKNK 260 (260)
T ss_pred CHHHHHHHHHHh-cC-CCCCCCCC
Confidence 999999999999 88 89999753
No 16
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB. This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).
Probab=100.00 E-value=6e-36 Score=270.98 Aligned_cols=173 Identities=23% Similarity=0.298 Sum_probs=159.8
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcC
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTG 88 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG 88 (293)
..++.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. .+++|++||
T Consensus 83 ~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~lG~~p~~g~~~~l~~~vG~~-~a~~l~l~g 161 (256)
T TIGR02280 83 NPLVRRLRALPLPVVCAVNGVAAGAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRA-RAMGLAMLG 161 (256)
T ss_pred HHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhCHH-HHHHHHHcC
Confidence 3467789999999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred CCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHH
Q 022721 89 KRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQ 168 (293)
Q Consensus 89 ~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~ 168 (293)
++++ |+||+++||||+++|++++.+.+
T Consensus 162 ~~~~-a~eA~~~Glv~~vv~~~~l~~~a---------------------------------------------------- 188 (256)
T TIGR02280 162 EKLD-ARTAASWGLIWQVVDDAALMDEA---------------------------------------------------- 188 (256)
T ss_pred CCCC-HHHHHHcCCcceeeChHHHHHHH----------------------------------------------------
Confidence 9999 99999999999999987766543
Q ss_pred HHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcHH
Q 022721 169 IIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFA 248 (293)
Q Consensus 169 i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~~ 248 (293)
.+||+ +|++.||.+++.+|++++... ..++.+.++.|...+..++.++|++
T Consensus 189 ----------------~~~a~----~la~~~~~~~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~~d~~ 239 (256)
T TIGR02280 189 ----------------QALAV----HLAAQPTRGLALTKRAIQAAA---------TNSLDTQLDLERDLQRELGRSADYA 239 (256)
T ss_pred ----------------HHHHH----HHHhCCHHHHHHHHHHHHhhh---------cCCHHHHHHHHHHHHHHHhcChhHH
Confidence 34666 899999999999999999876 5679999999999999999999999
Q ss_pred HHHHHHhhCCCCCCCCCC
Q 022721 249 EGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 249 egv~a~lv~k~r~P~w~~ 266 (293)
||+++|+ +| |+|+|++
T Consensus 240 eg~~af~-~k-r~p~~~~ 255 (256)
T TIGR02280 240 EGVTAFL-DK-RNPQFTG 255 (256)
T ss_pred HHHHHHH-cC-CCCCCCC
Confidence 9999999 88 8999975
No 17
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.9e-36 Score=273.42 Aligned_cols=179 Identities=21% Similarity=0.253 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 83 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~ 83 (293)
|+...+.++..|..+||||||++||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. .+++
T Consensus 91 ~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~LalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~ 169 (269)
T PRK06127 91 YEQAVEAAQAALADYAKPTIACIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGPS-AAKD 169 (269)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEeeCCCEeeCchhhhCCCCCccHHHHHHHHhCHH-HHHH
Confidence 455556788899999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCC
Q 022721 84 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 163 (293)
Q Consensus 84 l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~ 163 (293)
|++||+.++ |+||+++||+|++||++++.+.+
T Consensus 170 l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------------------------------------- 201 (269)
T PRK06127 170 LFYTARRFD-AAEALRIGLVHRVTAADDLETAL----------------------------------------------- 201 (269)
T ss_pred HHHcCCCCC-HHHHHHcCCCCEeeCHHHHHHHH-----------------------------------------------
Confidence 999999999 99999999999999987766643
Q ss_pred CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCC
Q 022721 164 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 243 (293)
Q Consensus 164 ~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~ 243 (293)
.+||+ +|+..+|.+++.+|++++... ..++++.++.|...+..++.
T Consensus 202 ---------------------~~~a~----~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~ 247 (269)
T PRK06127 202 ---------------------ADYAA----TIAGNAPLTLRAAKRAIAELL---------KDEPERDMAACQALVAACFD 247 (269)
T ss_pred ---------------------HHHHH----HHHhCCHHHHHHHHHHHHHhc---------cCCHHHHHHHHHHHHHHHhc
Confidence 34666 899999999999999999876 56789999999999999999
Q ss_pred CCcHHHHHHHHhhCCCCCCCCCCC
Q 022721 244 RSDFAEGVRAVLVDKDQNPKWNPA 267 (293)
Q Consensus 244 ~~d~~egv~a~lv~k~r~P~w~~~ 267 (293)
++|+.||+++|+ +| |+|+|+++
T Consensus 248 ~~d~~e~~~af~-ek-r~p~~~~~ 269 (269)
T PRK06127 248 SEDYREGRAAFM-EK-RKPVFKGR 269 (269)
T ss_pred ChHHHHHHHHHh-cC-CCCCCCCC
Confidence 999999999999 88 89999763
No 18
>PRK06142 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.8e-36 Score=273.89 Aligned_cols=175 Identities=18% Similarity=0.255 Sum_probs=159.9
Q ss_pred HHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhh
Q 022721 7 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM 86 (293)
Q Consensus 7 ~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~l 86 (293)
...+++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. .+++|++
T Consensus 97 ~~~~~~~~i~~~~kpvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~-~a~~l~l 175 (272)
T PRK06142 97 RLQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVADVGSLQRLPRIIGDG-HLRELAL 175 (272)
T ss_pred HHHHHHHHHHhCCCCEEEEecCccccchHHHHHhCCEEEecCCCeecchhhhhCCCCCchHHHHHHHHhCHH-HHHHHHH
Confidence 345677889999999999999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred cCCCCCCHHHHHHcCccceeccC-CChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCC
Q 022721 87 TGKRISTPSDALFAGLGTDYVPS-GNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKS 165 (293)
Q Consensus 87 tG~~l~~a~eA~~~Gl~~~~v~~-~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t 165 (293)
||+.++ |++|+++||+|++||+ +++.+.+
T Consensus 176 ~g~~~~-a~eA~~~GLv~~vv~~~~~l~~~a------------------------------------------------- 205 (272)
T PRK06142 176 TGRDID-AAEAEKIGLVNRVYDDADALLAAA------------------------------------------------- 205 (272)
T ss_pred hCCCcC-HHHHHHcCCccEecCCHHHHHHHH-------------------------------------------------
Confidence 999999 9999999999999985 5555432
Q ss_pred HHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCC
Q 022721 166 VRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRS 245 (293)
Q Consensus 166 ~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~ 245 (293)
.+|+. +|.+.||.+++.+|+++++.. ..++.+.+..|......++.++
T Consensus 206 -------------------~~~a~----~ia~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~~~~~~~~~~~~~ 253 (272)
T PRK06142 206 -------------------HATAR----EIAAKSPLAVRGTKEVLDYMR---------DHRVADGLRYVATWNAAMLPSK 253 (272)
T ss_pred -------------------HHHHH----HHHhCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHHHhcCc
Confidence 34666 899999999999999999876 5679999999999999999999
Q ss_pred cHHHHHHHHhhCCCCCCCCCC
Q 022721 246 DFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 246 d~~egv~a~lv~k~r~P~w~~ 266 (293)
|+.||+++|+ +| |+|+|++
T Consensus 254 d~~egv~af~-~k-r~p~~~~ 272 (272)
T PRK06142 254 DLTEAIAAHM-EK-RPPEFTG 272 (272)
T ss_pred cHHHHHHHHh-cC-CCCCCCC
Confidence 9999999999 88 8999964
No 19
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional
Probab=100.00 E-value=8e-36 Score=270.03 Aligned_cols=174 Identities=21% Similarity=0.323 Sum_probs=160.2
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhc
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMT 87 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~lt 87 (293)
...++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. .+++|++|
T Consensus 81 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~-~a~~l~l~ 159 (255)
T PRK09674 81 RPQLWQRLQAFNKPLIAAVNGYALGAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGKS-LASQMVLT 159 (255)
T ss_pred HHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEeCchhhcCCCCCccHHHHHHHHhCHH-HHHHHHHc
Confidence 34577889999999999999999999999999999999999999999999999999999999999999987 99999999
Q ss_pred CCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHH
Q 022721 88 GKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVR 167 (293)
Q Consensus 88 G~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~ 167 (293)
|+.++ |+||+++||+|++||++++.+.+
T Consensus 160 g~~~~-a~eA~~~Glv~~vv~~~~~~~~a--------------------------------------------------- 187 (255)
T PRK09674 160 GESIT-AQQAQQAGLVSEVFPPELTLERA--------------------------------------------------- 187 (255)
T ss_pred CCccC-HHHHHHcCCCcEecChHHHHHHH---------------------------------------------------
Confidence 99999 99999999999999987655432
Q ss_pred HHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcH
Q 022721 168 QIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDF 247 (293)
Q Consensus 168 ~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~ 247 (293)
.+|++ +|+++||.+++.+|++++... ..+++++++.|.+.+..++.++|+
T Consensus 188 -----------------~~~a~----~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~~~~ 237 (255)
T PRK09674 188 -----------------LQLAS----KIARHSPLALRAAKQALRQSQ---------EVDLQAGLAQERQLFTLLAATEDR 237 (255)
T ss_pred -----------------HHHHH----HHHhCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHHHhcCHHH
Confidence 34666 999999999999999999876 567999999999999999999999
Q ss_pred HHHHHHHhhCCCCCCCCCC
Q 022721 248 AEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 248 ~egv~a~lv~k~r~P~w~~ 266 (293)
.||+++|+ +| |+|+|.+
T Consensus 238 ~e~i~af~-~k-r~p~~~~ 254 (255)
T PRK09674 238 HEGISAFL-EK-RTPDFKG 254 (255)
T ss_pred HHHHHHHh-cc-CCCCCCC
Confidence 99999999 88 8999975
No 20
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=7.8e-36 Score=273.20 Aligned_cols=178 Identities=20% Similarity=0.216 Sum_probs=162.1
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCC-CchHHHHHhcCCCcHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFP-DVGFSYIAAKGPGGGSVGA 82 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p-~~g~~~~l~r~~G~~~~a~ 82 (293)
|.+...+++.+|..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++| ++|++++|++++|.. .++
T Consensus 98 ~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~-~a~ 176 (277)
T PRK08258 98 FTRMTGDLVKAMRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAGADMGACALLPRIIGQG-RAS 176 (277)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeccccccCcCCCCchHHHHHHHHhCHH-HHH
Confidence 444456788899999999999999999999999999999999999999999999999995 789999999999998 999
Q ss_pred HHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCC
Q 022721 83 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 162 (293)
Q Consensus 83 ~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~ 162 (293)
+|++||++++ |+||+++||||+++|++++.+.+
T Consensus 177 ~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a---------------------------------------------- 209 (277)
T PRK08258 177 ELLYTGRSMS-AEEGERWGFFNRLVEPEELLAEA---------------------------------------------- 209 (277)
T ss_pred HHHHcCCCCC-HHHHHHcCCCcEecCHHHHHHHH----------------------------------------------
Confidence 9999999999 99999999999999977665533
Q ss_pred CCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhC
Q 022721 163 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 242 (293)
Q Consensus 163 ~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~ 242 (293)
.++|. +|+++||.+++.+|++++... ..++++.++.|...+..++
T Consensus 210 ----------------------~~~a~----~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~ 254 (277)
T PRK08258 210 ----------------------QALAR----RLAAGPTFAHGMTKTMLHQEW---------DMGLEEAIEAEAQAQAICM 254 (277)
T ss_pred ----------------------HHHHH----HHHhCCHHHHHHHHHHHHhhc---------cCCHHHHHHHHHHHHHHHh
Confidence 34666 899999999999999999876 5679999999999999999
Q ss_pred CCCcHHHHHHHHhhCCCCCCCCCC
Q 022721 243 LRSDFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 243 ~~~d~~egv~a~lv~k~r~P~w~~ 266 (293)
.++|+.||+++|+ +| |+|+|++
T Consensus 255 ~s~d~~eg~~af~-ek-r~p~~~~ 276 (277)
T PRK08258 255 QTEDFRRAYEAFV-AK-RKPVFEG 276 (277)
T ss_pred cCchHHHHHHHHh-cC-CCCCCCC
Confidence 9999999999999 89 8999975
No 21
>PRK09245 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=7.2e-36 Score=271.84 Aligned_cols=174 Identities=22% Similarity=0.299 Sum_probs=160.0
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhc
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMT 87 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~lt 87 (293)
...++.++..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. .+++|++|
T Consensus 92 ~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~-~a~~l~l~ 170 (266)
T PRK09245 92 IQRIPLALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGMA-RAAEMAFT 170 (266)
T ss_pred HHHHHHHHHcCCCCEEEEECCEeecHHHHHHHhCCEEEecCCCEEcccccccCcCCCcchhhhHHHHhhHH-HHHHHHHc
Confidence 34677889999999999999999999999999999999999999999999999999999999999999997 99999999
Q ss_pred CCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHH
Q 022721 88 GKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVR 167 (293)
Q Consensus 88 G~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~ 167 (293)
|++++ |++|+++||||++||++++.+.+
T Consensus 171 g~~~~-a~eA~~~Glv~~vv~~~~l~~~a--------------------------------------------------- 198 (266)
T PRK09245 171 GDAID-AATALEWGLVSRVVPADQLLPAA--------------------------------------------------- 198 (266)
T ss_pred CCCcC-HHHHHHcCCcceecCHHHHHHHH---------------------------------------------------
Confidence 99999 99999999999999987766543
Q ss_pred HHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcH
Q 022721 168 QIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDF 247 (293)
Q Consensus 168 ~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~ 247 (293)
.++++ +|++.||.+++.+|++++... ..++++.+..|......++.++|+
T Consensus 199 -----------------~~~a~----~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~~d~ 248 (266)
T PRK09245 199 -----------------RALAE----RIAANPPHALRLTKRLLREGQ---------HASLDTLLELSAAYQALAHHTADH 248 (266)
T ss_pred -----------------HHHHH----HHHhCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHHHhcCHhH
Confidence 34666 899999999999999999876 567899999999888889999999
Q ss_pred HHHHHHHhhCCCCCCCCCC
Q 022721 248 AEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 248 ~egv~a~lv~k~r~P~w~~ 266 (293)
.||+++|+ +| |+|.|++
T Consensus 249 ~eg~~af~-~k-r~p~~~~ 265 (266)
T PRK09245 249 REAVDAFL-EK-RPPVFTG 265 (266)
T ss_pred HHHHHHHH-cC-CCCCCCC
Confidence 99999999 88 8999975
No 22
>PRK08138 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-35 Score=269.88 Aligned_cols=178 Identities=20% Similarity=0.262 Sum_probs=162.4
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 83 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~ 83 (293)
+.+....++..+..+|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. .+++
T Consensus 83 ~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~ 161 (261)
T PRK08138 83 YLRHTERYWEAIAQCPKPVIAAVNGYALGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGKF-KAMR 161 (261)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEccEEEcHHHHHHHhCCEEEecCCCEeeCcccccccCCCCcHHHHHHHHhCHH-HHHH
Confidence 344456788899999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCC
Q 022721 84 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 163 (293)
Q Consensus 84 l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~ 163 (293)
|++||++++ |+||+++||+|++||++++.+.+
T Consensus 162 l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------------------------------------- 193 (261)
T PRK08138 162 MALTGCMVP-APEALAIGLVSEVVEDEQTLPRA----------------------------------------------- 193 (261)
T ss_pred HHHcCCCCC-HHHHHHCCCCcEecCchHHHHHH-----------------------------------------------
Confidence 999999999 99999999999999987765533
Q ss_pred CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCC
Q 022721 164 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 243 (293)
Q Consensus 164 ~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~ 243 (293)
.+||+ +|.+.+|.+++.+|++++... ..+++++++.|.+.+..++.
T Consensus 194 ---------------------~~~a~----~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~ 239 (261)
T PRK08138 194 ---------------------LELAR----EIARMPPLALAQIKEVVLAGA---------DAPLDAALALERKAFQLLFD 239 (261)
T ss_pred ---------------------HHHHH----HHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHHhc
Confidence 34666 888999999999999999876 56799999999999999999
Q ss_pred CCcHHHHHHHHhhCCCCCCCCCC
Q 022721 244 RSDFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 244 ~~d~~egv~a~lv~k~r~P~w~~ 266 (293)
++|+.||+++|+ +| |+|+|++
T Consensus 240 ~~~~~~~i~af~-~k-r~~~~~~ 260 (261)
T PRK08138 240 SEDQKEGMDAFL-EK-RKPAYKG 260 (261)
T ss_pred CHHHHHHHHHHh-cC-CCCCCCC
Confidence 999999999999 88 8999975
No 23
>PRK08139 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=1.4e-35 Score=269.95 Aligned_cols=177 Identities=21% Similarity=0.311 Sum_probs=160.8
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 83 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~ 83 (293)
+++...+++.+|..+|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++++ ++|+|++|.. .+++
T Consensus 89 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~~-~~l~r~vG~~-~A~~ 166 (266)
T PRK08139 89 LFARCSRVMQAIVALPQPVIARVHGIATAAGCQLVASCDLAVAADTARFAVPGVNIGLFCSTPM-VALSRNVPRK-QAME 166 (266)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECceeeHHHHHHHHhCCEEEEeCCCEEeCcccCcCCCCCccH-HHHHHHhCHH-HHHH
Confidence 4455567888999999999999999999999999999999999999999999999999998764 5799999998 9999
Q ss_pred HhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCC
Q 022721 84 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 163 (293)
Q Consensus 84 l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~ 163 (293)
|++||++++ |+||+++||||++||++++.+.+
T Consensus 167 l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a----------------------------------------------- 198 (266)
T PRK08139 167 MLLTGEFID-AATAREWGLVNRVVPADALDAAV----------------------------------------------- 198 (266)
T ss_pred HHHcCCccC-HHHHHHcCCccEeeChhHHHHHH-----------------------------------------------
Confidence 999999999 99999999999999987766643
Q ss_pred CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCC
Q 022721 164 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 243 (293)
Q Consensus 164 ~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~ 243 (293)
.++++ +|++.+|.+++.+|++++... ..++++++..|...+..++.
T Consensus 199 ---------------------~~~a~----~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~ 244 (266)
T PRK08139 199 ---------------------ARLAA----VIAAKSPAAVRIGKEAFYRQA---------EMPLADAYAYAGDVMAENMM 244 (266)
T ss_pred ---------------------HHHHH----HHHhCCHHHHHHHHHHHHHhc---------cCCHHHHHHHHHHHHHHHhc
Confidence 34666 899999999999999999876 56799999999999999999
Q ss_pred CCcHHHHHHHHhhCCCCCCCCCC
Q 022721 244 RSDFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 244 ~~d~~egv~a~lv~k~r~P~w~~ 266 (293)
++|+.||+++|+ +| |+|+|.+
T Consensus 245 ~~d~~eg~~af~-~k-r~p~~~~ 265 (266)
T PRK08139 245 AEDAEEGIDAFL-EK-RPPEWRG 265 (266)
T ss_pred CchHHHHHHHHh-cC-CCCCCCC
Confidence 999999999999 88 8999975
No 24
>PRK07799 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-35 Score=269.62 Aligned_cols=170 Identities=21% Similarity=0.261 Sum_probs=156.9
Q ss_pred HHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcCCCCC
Q 022721 13 CKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRIS 92 (293)
Q Consensus 13 ~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG~~l~ 92 (293)
.++..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. .+++|++||+.++
T Consensus 94 ~~~~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~-~a~~l~ltg~~~~ 172 (263)
T PRK07799 94 LKGRRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYT-VACDLLLTGRHIT 172 (263)
T ss_pred HHHhcCCCCEEEEECCeEeccHHHHHHhCCEEEecCCCEecCcccccCcCCCccHHHHHHHHhCHH-HHHHHHHcCCCCC
Confidence 356889999999999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred CHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHHHHHH
Q 022721 93 TPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEE 172 (293)
Q Consensus 93 ~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~i~~~ 172 (293)
|+||+++||||++||++++.+.+
T Consensus 173 -a~eA~~~Glv~~vv~~~~l~~~a-------------------------------------------------------- 195 (263)
T PRK07799 173 -AAEAKEIGLIGHVVPDGQALDKA-------------------------------------------------------- 195 (263)
T ss_pred -HHHHHHcCCccEecCcchHHHHH--------------------------------------------------------
Confidence 99999999999999988765532
Q ss_pred HHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcHHHHHH
Q 022721 173 LKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVR 252 (293)
Q Consensus 173 l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~~egv~ 252 (293)
.++++ +|.+.||.+++.+|++++... ..++.++++.|.+.+..++.++|++||++
T Consensus 196 ------------~~~a~----~~~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~~~~~~~egi~ 250 (263)
T PRK07799 196 ------------LELAE----LINANGPLAVQAILRTIRETE---------GMHENEAFKIDTKIGIPVFLSEDAKEGPR 250 (263)
T ss_pred ------------HHHHH----HHHhcChHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHHHhcCccHHHHHH
Confidence 34666 899999999999999999876 56799999999999999999999999999
Q ss_pred HHhhCCCCCCCCCCC
Q 022721 253 AVLVDKDQNPKWNPA 267 (293)
Q Consensus 253 a~lv~k~r~P~w~~~ 267 (293)
+|+ +| |+|+|.++
T Consensus 251 af~-~~-r~p~~~~~ 263 (263)
T PRK07799 251 AFA-EK-RAPNFQGR 263 (263)
T ss_pred HHH-cc-CCCCCCCC
Confidence 999 88 89999864
No 25
>PRK08140 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.2e-35 Score=268.11 Aligned_cols=172 Identities=22% Similarity=0.304 Sum_probs=159.1
Q ss_pred HHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcCC
Q 022721 10 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGK 89 (293)
Q Consensus 10 ~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG~ 89 (293)
.++.++..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. .+++|++||+
T Consensus 90 ~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~-~a~~l~l~g~ 168 (262)
T PRK08140 90 PLVRRLRALPLPVIAAVNGVAAGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVGMA-RALGLALLGE 168 (262)
T ss_pred HHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEEeccccccCCCCCccHHHHHHHHhCHH-HHHHHHHcCC
Confidence 467789999999999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred CCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHHH
Q 022721 90 RISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQI 169 (293)
Q Consensus 90 ~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~i 169 (293)
+++ |+||+++||||++||++++.+.+
T Consensus 169 ~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------------------------------------------- 194 (262)
T PRK08140 169 KLS-AEQAEQWGLIWRVVDDAALADEA----------------------------------------------------- 194 (262)
T ss_pred CcC-HHHHHHcCCccEeeChHHHHHHH-----------------------------------------------------
Confidence 999 99999999999999987666533
Q ss_pred HHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcHHH
Q 022721 170 IEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAE 249 (293)
Q Consensus 170 ~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~~e 249 (293)
.++|+ +|+++||.+++.+|++++... ..+++++++.|...+..++.++|+.|
T Consensus 195 ---------------~~~a~----~ia~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~~~~~e 246 (262)
T PRK08140 195 ---------------QQLAA----HLATQPTRGLALIKQAMNASA---------TNTLDAQLDLERDLQREAGRSADYAE 246 (262)
T ss_pred ---------------HHHHH----HHHhCCHHHHHHHHHHHHHhh---------hCCHHHHHHHHHHHHHHHhcChhHHH
Confidence 34666 899999999999999999876 56799999999999999999999999
Q ss_pred HHHHHhhCCCCCCCCCC
Q 022721 250 GVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 250 gv~a~lv~k~r~P~w~~ 266 (293)
|+++|+ +| |+|.|.+
T Consensus 247 ~~~af~-~k-r~p~~~~ 261 (262)
T PRK08140 247 GVSAFL-EK-RAPRFTG 261 (262)
T ss_pred HHHHHh-cC-CCCCCCC
Confidence 999999 88 8999975
No 26
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.3e-35 Score=269.30 Aligned_cols=179 Identities=25% Similarity=0.346 Sum_probs=162.5
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHH
Q 022721 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 82 (293)
Q Consensus 3 ~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~ 82 (293)
.++....+++.++..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. .++
T Consensus 82 ~~~~~~~~~~~~l~~~~~pvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vg~~-~a~ 160 (260)
T PRK07659 82 GVMNTISEIVVTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGEN-KAK 160 (260)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEecCceecHHHHHHHhCCEEEEcCCCEEcCchhhcCCCCCCchhhhHHHhcCHH-HHH
Confidence 3455567788899999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCC
Q 022721 83 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 162 (293)
Q Consensus 83 ~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~ 162 (293)
+|++||+.++ |+||+++||+|++| ++++.+.+
T Consensus 161 ~l~ltg~~~~-a~eA~~~Glv~~vv-~~~~~~~a---------------------------------------------- 192 (260)
T PRK07659 161 QIIWEGKKLS-ATEALDLGLIDEVI-GGDFQTAA---------------------------------------------- 192 (260)
T ss_pred HHHHhCCccC-HHHHHHcCChHHHh-hhHHHHHH----------------------------------------------
Confidence 9999999999 99999999999999 66655532
Q ss_pred CCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhC
Q 022721 163 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 242 (293)
Q Consensus 163 ~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~ 242 (293)
.++++ +|++++|.+++.+|++++... ..++++.++.|...+..++
T Consensus 193 ----------------------~~~a~----~l~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~ 237 (260)
T PRK07659 193 ----------------------KQKIS----EWLQKPLKAMIETKQIYCELN---------RSQLEQVLQLEKRAQYAMR 237 (260)
T ss_pred ----------------------HHHHH----HHHhCCHHHHHHHHHHHHhhh---------cCCHHHHHHHHHHHHHHHh
Confidence 34565 899999999999999999876 5679999999999999999
Q ss_pred CCCcHHHHHHHHhhCCCCCCCCCCC
Q 022721 243 LRSDFAEGVRAVLVDKDQNPKWNPA 267 (293)
Q Consensus 243 ~~~d~~egv~a~lv~k~r~P~w~~~ 267 (293)
.++|++||+.+|+ +| |+|+|+++
T Consensus 238 ~~~~~~egi~af~-~k-r~p~~~~~ 260 (260)
T PRK07659 238 QTADHKEGIRAFL-EK-RLPVFKGE 260 (260)
T ss_pred cCHhHHHHHHHHh-cC-CCCCCCCC
Confidence 9999999999999 88 89999753
No 27
>PRK03580 carnitinyl-CoA dehydratase; Provisional
Probab=100.00 E-value=2.5e-35 Score=267.64 Aligned_cols=173 Identities=21% Similarity=0.366 Sum_probs=157.6
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcC
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTG 88 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG 88 (293)
+.++.++..+|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. .++++++||
T Consensus 84 ~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vg~~-~a~~l~l~g 162 (261)
T PRK03580 84 FAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPA-IANEMVMTG 162 (261)
T ss_pred hHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEecCCCEEeCcccccCcCCCccHHHHHHHHhCHH-HHHHHHHhC
Confidence 4567789999999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred CCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHH
Q 022721 89 KRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQ 168 (293)
Q Consensus 89 ~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~ 168 (293)
++++ |++|+++||||++||++++.+.+
T Consensus 163 ~~~~-a~eA~~~Glv~~vv~~~~l~~~a---------------------------------------------------- 189 (261)
T PRK03580 163 RRMD-AEEALRWGIVNRVVPQAELMDRA---------------------------------------------------- 189 (261)
T ss_pred CccC-HHHHHHcCCCcEecCHhHHHHHH----------------------------------------------------
Confidence 9999 99999999999999987766643
Q ss_pred HHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHH----HHHhhCCC
Q 022721 169 IIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYR----VALRSSLR 244 (293)
Q Consensus 169 i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~----~~~~~~~~ 244 (293)
.+|+. +|++.+|.+++.+|++++... ..+++++++.|.. .+..++.+
T Consensus 190 ----------------~~~a~----~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~~~~~ 240 (261)
T PRK03580 190 ----------------RELAQ----QLVNSAPLAIAALKEIYRETS---------EMPVEEAYRYIRSGVLKHYPSVLHS 240 (261)
T ss_pred ----------------HHHHH----HHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHhhhHHHHHHHhcC
Confidence 34666 899999999999999999876 5679999988864 66678899
Q ss_pred CcHHHHHHHHhhCCCCCCCCCC
Q 022721 245 SDFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 245 ~d~~egv~a~lv~k~r~P~w~~ 266 (293)
+|+.||+++|+ +| |+|+|++
T Consensus 241 ~d~~e~~~af~-ek-r~~~~~~ 260 (261)
T PRK03580 241 EDALEGPRAFA-EK-RDPVWKG 260 (261)
T ss_pred ccHHHHHHHHh-cC-CCCCCCC
Confidence 99999999999 88 8999975
No 28
>PRK05981 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.3e-35 Score=268.56 Aligned_cols=175 Identities=20% Similarity=0.317 Sum_probs=160.9
Q ss_pred HHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhh
Q 022721 7 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM 86 (293)
Q Consensus 7 ~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~l 86 (293)
....++.+|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. .+++|++
T Consensus 91 ~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~~e~~lG~~p~~g~~~~l~~~vg~~-~a~~l~l 169 (266)
T PRK05981 91 AYHPFLRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRLVGKA-RAMELSL 169 (266)
T ss_pred HHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEechHhhcCCCCCccHHHHHHHHhHHH-HHHHHHH
Confidence 346688899999999999999999999999999999999999999999999999999999999999999987 9999999
Q ss_pred cCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCH
Q 022721 87 TGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSV 166 (293)
Q Consensus 87 tG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~ 166 (293)
||++++ |++|+++||||+++|++++.+.+
T Consensus 170 ~g~~~~-a~eA~~~Glv~~vv~~~~~~~~a-------------------------------------------------- 198 (266)
T PRK05981 170 LGEKLP-AETALQWGLVNRVVDDAELMAEA-------------------------------------------------- 198 (266)
T ss_pred hCCCcC-HHHHHHcCCceEeeCHhHHHHHH--------------------------------------------------
Confidence 999999 99999999999999987765533
Q ss_pred HHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCc
Q 022721 167 RQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSD 246 (293)
Q Consensus 167 ~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d 246 (293)
.+|++ ++++.+|.+++.+|++++... ..++.+.++.|...+..++.++|
T Consensus 199 ------------------~~~a~----~l~~~~~~a~~~~K~~~~~~~---------~~~~~~~~~~e~~~~~~~~~s~d 247 (266)
T PRK05981 199 ------------------MKLAH----ELANGPTVALGLIRKLYWDSP---------ENDFEEQLNLEREAQRIAGKTED 247 (266)
T ss_pred ------------------HHHHH----HHHcCCHHHHHHHHHHHHHhh---------hcCHHHHHHHHHHHHHHHhcChh
Confidence 34666 899999999999999998876 56799999999999999999999
Q ss_pred HHHHHHHHhhCCCCCCCCCC
Q 022721 247 FAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 247 ~~egv~a~lv~k~r~P~w~~ 266 (293)
++||+.+|+ +| |+|+|++
T Consensus 248 ~~e~~~af~-~k-r~~~~~~ 265 (266)
T PRK05981 248 FKEGVGAFL-QK-RPAQFKG 265 (266)
T ss_pred HHHHHHHHh-cC-CCCCCCC
Confidence 999999999 88 8999975
No 29
>PRK06494 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.9e-35 Score=268.10 Aligned_cols=169 Identities=23% Similarity=0.371 Sum_probs=154.0
Q ss_pred HHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcCCCCCC
Q 022721 14 KISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRIST 93 (293)
Q Consensus 14 ~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG~~l~~ 93 (293)
.+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. .+++|++||+.++
T Consensus 89 ~~~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~-~a~~lll~g~~~~- 166 (259)
T PRK06494 89 SRFDLDKPIIAAVNGVAMGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGLK-RAMGMILTGRRVT- 166 (259)
T ss_pred HHhcCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCchHHHHHHHHcCHH-HHHHHHHcCCcCC-
Confidence 45689999999999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHHHHHHH
Q 022721 94 PSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEEL 173 (293)
Q Consensus 94 a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~i~~~l 173 (293)
|+||+++||+|++||++++.+.+
T Consensus 167 a~eA~~~GLv~~vv~~~~l~~~a--------------------------------------------------------- 189 (259)
T PRK06494 167 AREGLELGFVNEVVPAGELLAAA--------------------------------------------------------- 189 (259)
T ss_pred HHHHHHcCCCcEecCHhHHHHHH---------------------------------------------------------
Confidence 99999999999999987666543
Q ss_pred HhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHH--HHHHHhhCCCCcHHHHH
Q 022721 174 KKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYE--YRVALRSSLRSDFAEGV 251 (293)
Q Consensus 174 ~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e--~~~~~~~~~~~d~~egv 251 (293)
.+||+ +|+++||.+++.+|++++... ..++++.+..| ...+..++.++|++||+
T Consensus 190 -----------~~~a~----~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~~~~d~~eg~ 245 (259)
T PRK06494 190 -----------ERWAD----DILACSPLSIRASKQAVYRGL---------EVSLEEAITAQRDYPAVEARRASQDYIEGP 245 (259)
T ss_pred -----------HHHHH----HHHhcCHHHHHHHHHHHHHhc---------cCCHHHHHHHHHHHHHHHHHhcCccHHHHH
Confidence 34676 899999999999999999876 56799999998 55677889999999999
Q ss_pred HHHhhCCCCCCCCCCC
Q 022721 252 RAVLVDKDQNPKWNPA 267 (293)
Q Consensus 252 ~a~lv~k~r~P~w~~~ 267 (293)
++|+ +| |+|+|+++
T Consensus 246 ~af~-~k-r~p~~~~~ 259 (259)
T PRK06494 246 KAFA-EK-RPPRWKGR 259 (259)
T ss_pred HHHH-cc-CCCCCCCC
Confidence 9999 88 89999753
No 30
>PRK06563 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.8e-35 Score=267.63 Aligned_cols=168 Identities=19% Similarity=0.216 Sum_probs=155.3
Q ss_pred HHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcCCCCCC
Q 022721 14 KISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRIST 93 (293)
Q Consensus 14 ~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG~~l~~ 93 (293)
.+..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. .+++|++||+.++
T Consensus 87 ~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l~ltg~~~~- 164 (255)
T PRK06563 87 VGRRLSKPLVVAVQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWG-NAMRYLLTGDEFD- 164 (255)
T ss_pred HHhcCCCCEEEEEcCeeecHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhhHH-HHHHHHHcCCCcC-
Confidence 58899999999999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHHHHHHH
Q 022721 94 PSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEEL 173 (293)
Q Consensus 94 a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~i~~~l 173 (293)
|+||+++||||++||++++.+.+
T Consensus 165 a~eA~~~Glv~~vv~~~~l~~~a--------------------------------------------------------- 187 (255)
T PRK06563 165 AQEALRLGLVQEVVPPGEQLERA--------------------------------------------------------- 187 (255)
T ss_pred HHHHHHcCCCcEeeCHHHHHHHH---------------------------------------------------------
Confidence 99999999999999977665532
Q ss_pred HhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcHHHHHHH
Q 022721 174 KKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRA 253 (293)
Q Consensus 174 ~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~~egv~a 253 (293)
.+|++ +|++.+|.+++.+|++++... ..++.++++.|...+..++.++|+.||+++
T Consensus 188 -----------~~~a~----~la~~~~~a~~~~K~~~~~~~---------~~~~~~~~~~e~~~~~~~~~~~d~~eg~~a 243 (255)
T PRK06563 188 -----------IELAE----RIARAAPLGVQATLASARAAV---------REGEAAAAAQLPPELRPLFTSEDAKEGVQA 243 (255)
T ss_pred -----------HHHHH----HHHhcCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHHHhcCchHHHHHHH
Confidence 34666 899999999999999998876 567999999999999999999999999999
Q ss_pred HhhCCCCCCCCCC
Q 022721 254 VLVDKDQNPKWNP 266 (293)
Q Consensus 254 ~lv~k~r~P~w~~ 266 (293)
|+ +| |+|.|++
T Consensus 244 f~-~k-r~p~~~~ 254 (255)
T PRK06563 244 FL-ER-RPARFKG 254 (255)
T ss_pred Hh-cC-CCCCCCC
Confidence 99 88 8999975
No 31
>PRK07511 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.2e-35 Score=266.78 Aligned_cols=177 Identities=21% Similarity=0.290 Sum_probs=162.4
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 83 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~ 83 (293)
++...+.++..+..+|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. .+++
T Consensus 83 ~~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~-~a~~ 161 (260)
T PRK07511 83 SIDGLHDWIRAIRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSWFLARALPRQ-LATE 161 (260)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEeeCCCEEeccccccCcCCCchHHHHHHHHhCHH-HHHH
Confidence 455667788899999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCC
Q 022721 84 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 163 (293)
Q Consensus 84 l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~ 163 (293)
|++||++++ |+||+++||+|++|+++++.+.+
T Consensus 162 l~ltg~~~~-a~eA~~~Glv~~vv~~~~~~~~a----------------------------------------------- 193 (260)
T PRK07511 162 LLLEGKPIS-AERLHALGVVNRLAEPGQALAEA----------------------------------------------- 193 (260)
T ss_pred HHHhCCCCC-HHHHHHcCCccEeeCchHHHHHH-----------------------------------------------
Confidence 999999999 99999999999999977655532
Q ss_pred CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCC
Q 022721 164 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 243 (293)
Q Consensus 164 ~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~ 243 (293)
.+|++ ++.+++|.+++.+|++++... ..++.+++..|...+..++.
T Consensus 194 ---------------------~~~a~----~l~~~~~~~~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~ 239 (260)
T PRK07511 194 ---------------------LALAD----QLAAGSPNALARIKSLIADAP---------EATLAAQLEAERDHFVASLH 239 (260)
T ss_pred ---------------------HHHHH----HHHhCCHHHHHHHHHHHHhhh---------cCCHHHHHHHHHHHHHHHhc
Confidence 34666 889999999999999999876 66899999999999999999
Q ss_pred CCcHHHHHHHHhhCCCCCCCCC
Q 022721 244 RSDFAEGVRAVLVDKDQNPKWN 265 (293)
Q Consensus 244 ~~d~~egv~a~lv~k~r~P~w~ 265 (293)
++|+.+|+++|+ +| |+|.|+
T Consensus 240 ~~~~~~~i~~f~-~~-r~~~~~ 259 (260)
T PRK07511 240 HADALEGIAAFL-EK-RAPDYK 259 (260)
T ss_pred CchHHHHHHHHh-cc-CCCCCC
Confidence 999999999999 88 889995
No 32
>PRK08252 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.1e-35 Score=265.23 Aligned_cols=166 Identities=16% Similarity=0.212 Sum_probs=153.5
Q ss_pred HhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcCCCCCCHH
Q 022721 16 SEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPS 95 (293)
Q Consensus 16 ~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG~~l~~a~ 95 (293)
..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. .+++|++||++++ |+
T Consensus 88 ~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~-~a~~l~l~g~~~~-a~ 165 (254)
T PRK08252 88 RPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYH-IAMELALTGDMLT-AE 165 (254)
T ss_pred hcCCCCEEEEECCEEehHHHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchHHHHHHHHcCHH-HHHHHHHcCCccC-HH
Confidence 479999999999999999999999999999999999999999999999999999999999998 9999999999999 99
Q ss_pred HHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHHHHHHHHh
Q 022721 96 DALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKK 175 (293)
Q Consensus 96 eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~i~~~l~~ 175 (293)
||+++||+|++||++++.+.+
T Consensus 166 eA~~~Glv~~vv~~~~l~~~a----------------------------------------------------------- 186 (254)
T PRK08252 166 RAHELGLVNRLTEPGQALDAA----------------------------------------------------------- 186 (254)
T ss_pred HHHHcCCcceecCcchHHHHH-----------------------------------------------------------
Confidence 999999999999987665532
Q ss_pred cccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcHHHHHHHHh
Q 022721 176 HQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVL 255 (293)
Q Consensus 176 ~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~~egv~a~l 255 (293)
.++++ +|+.+||.+++.+|++++... ..++.++++.|...+..++.++|++||+++|+
T Consensus 187 ---------~~~a~----~l~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~~~~~~~eg~~af~ 244 (254)
T PRK08252 187 ---------LELAE----RIAANGPLAVAASKRIVVESG---------DWSEDEMFARQRELIAPVFTSADAKEGATAFA 244 (254)
T ss_pred ---------HHHHH----HHHhCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHHHhcCchHHHHHHHHh
Confidence 24555 899999999999999999876 56799999999999999999999999999999
Q ss_pred hCCCCCCCCCC
Q 022721 256 VDKDQNPKWNP 266 (293)
Q Consensus 256 v~k~r~P~w~~ 266 (293)
+| |+|+|++
T Consensus 245 -~k-r~p~~~~ 253 (254)
T PRK08252 245 -EK-RAPVWTG 253 (254)
T ss_pred -cC-CCCCCCC
Confidence 88 8999975
No 33
>PRK07468 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.9e-35 Score=266.50 Aligned_cols=176 Identities=18% Similarity=0.265 Sum_probs=157.1
Q ss_pred HHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHH
Q 022721 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 84 (293)
Q Consensus 5 ~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l 84 (293)
++.+..++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++ +|.. .+++|
T Consensus 86 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~~~~-vG~~-~a~~l 163 (262)
T PRK07468 86 ARRLAMMLKALNDLPKPLIGRIQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPYVVAR-MGEA-NARRV 163 (262)
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCEEEhHHHHHHHhCCEEEEeCCCEEeCchhccCCCcccchhhHHhh-ccHH-HHHHH
Confidence 344566788899999999999999999999999999999999999999999999999999999976654 8987 99999
Q ss_pred hhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCC
Q 022721 85 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEK 164 (293)
Q Consensus 85 ~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~ 164 (293)
++||++++ |++|+++||+|+++|.+++++.+
T Consensus 164 ll~g~~~~-a~eA~~~Glv~~v~~~~~l~~~~------------------------------------------------ 194 (262)
T PRK07468 164 FMSARLFD-AEEAVRLGLLSRVVPAERLDAAV------------------------------------------------ 194 (262)
T ss_pred HHhCCccC-HHHHHHcCCcceecCHHHHHHHH------------------------------------------------
Confidence 99999999 99999999999999977655533
Q ss_pred CHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCC
Q 022721 165 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLR 244 (293)
Q Consensus 165 t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~ 244 (293)
.++++ +|++.+|.+++.+|++++... ...+++.++.|...+..++.+
T Consensus 195 --------------------~~~a~----~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~s 241 (262)
T PRK07468 195 --------------------EAEVT----PYLSCAPGAVAAAKALVRALG---------APIDEAVIDATIEALADTWET 241 (262)
T ss_pred --------------------HHHHH----HHHhcCHHHHHHHHHHHHhhh---------ccChHHHHHHHHHHHHHHhcC
Confidence 24566 899999999999999998765 456789999999999999999
Q ss_pred CcHHHHHHHHhhCCCCCCCCCC
Q 022721 245 SDFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 245 ~d~~egv~a~lv~k~r~P~w~~ 266 (293)
+|++||+++|+ +| |+|+|.+
T Consensus 242 ~d~~e~~~af~-~k-r~~~~~~ 261 (262)
T PRK07468 242 EEAREGIAAFF-DK-RAPAWRG 261 (262)
T ss_pred HHHHHHHHHHH-cC-CCCCCCC
Confidence 99999999999 88 8999964
No 34
>PRK05995 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.1e-35 Score=266.29 Aligned_cols=176 Identities=19% Similarity=0.286 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHh
Q 022721 6 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 85 (293)
Q Consensus 6 ~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ 85 (293)
+...+++.+|..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++ +++++|.. .+++|+
T Consensus 86 ~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~-l~~~vg~~-~a~~l~ 163 (262)
T PRK05995 86 RRLADMLRAIYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIPATISPY-VIRAMGER-AARRYF 163 (262)
T ss_pred HHHHHHHHHHHcCCCCEEEEECCEEEhhHHHHHHhCCEEEeeCCCEEeCcccccccCccchHHH-HHHHhCHH-HHHHHH
Confidence 3456778889999999999999999999999999999999999999999999999999988764 78999998 999999
Q ss_pred hcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCC
Q 022721 86 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKS 165 (293)
Q Consensus 86 ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t 165 (293)
+||++++ |+||+++||+|++||++++.+.+
T Consensus 164 l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a------------------------------------------------- 193 (262)
T PRK05995 164 LTAERFD-AAEALRLGLVHEVVPAEALDAKV------------------------------------------------- 193 (262)
T ss_pred HcCCccC-HHHHHHcCCCCeecCHHHHHHHH-------------------------------------------------
Confidence 9999999 99999999999999877666643
Q ss_pred HHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHH-HHHHHHHHHhhCCC
Q 022721 166 VRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGV-MKYEYRVALRSSLR 244 (293)
Q Consensus 166 ~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~-l~~e~~~~~~~~~~ 244 (293)
.++|+ +|++.||.+++.+|++++... ..++.+. ++.|...+..++.+
T Consensus 194 -------------------~~~a~----~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~~e~~~~~~~~~~ 241 (262)
T PRK05995 194 -------------------DELLA----ALVANSPQAVRAGKRLVRDVA---------GRPIDAALIADTASRIALIRAT 241 (262)
T ss_pred -------------------HHHHH----HHHhCCHHHHHHHHHHHHhhh---------cCChhhHHHHHHHHHHHHHhcC
Confidence 34666 899999999999999998876 5578888 88888888888999
Q ss_pred CcHHHHHHHHhhCCCCCCCCCCC
Q 022721 245 SDFAEGVRAVLVDKDQNPKWNPA 267 (293)
Q Consensus 245 ~d~~egv~a~lv~k~r~P~w~~~ 267 (293)
+|+.||+++|+ +| |+|.|+++
T Consensus 242 ~d~~e~~~af~-~k-r~p~~~~~ 262 (262)
T PRK05995 242 EEAREGVAAFL-EK-RKPAWRGR 262 (262)
T ss_pred HHHHHHHHHHh-cC-CCCCCCCC
Confidence 99999999999 88 89999864
No 35
>PRK06688 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.1e-35 Score=265.79 Aligned_cols=178 Identities=22% Similarity=0.335 Sum_probs=163.2
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 83 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~ 83 (293)
+++..++++..|..+|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++|+++++++++|.. .+++
T Consensus 81 ~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~-~a~~ 159 (259)
T PRK06688 81 ELAPVNRFLRAIAALPKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAGGSALLPRLIGRA-RAAE 159 (259)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEecCchhhcCCCCCcchhhHHHHHhhHH-HHHH
Confidence 556667888999999999999999999999999999999999999999999999999999999999999999997 9999
Q ss_pred HhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCC
Q 022721 84 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 163 (293)
Q Consensus 84 l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~ 163 (293)
|++||++++ |++|+++||+|+++|++++.+.+
T Consensus 160 l~l~g~~~~-a~eA~~~Glv~~v~~~~~l~~~a----------------------------------------------- 191 (259)
T PRK06688 160 MLLLGEPLS-AEEALRIGLVNRVVPAAELDAEA----------------------------------------------- 191 (259)
T ss_pred HHHhCCccC-HHHHHHcCCcceecCHHHHHHHH-----------------------------------------------
Confidence 999999999 99999999999999877655533
Q ss_pred CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCC
Q 022721 164 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 243 (293)
Q Consensus 164 ~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~ 243 (293)
.++|+ +|.+.+|.+++.+|+++++.. ..++++++..|.+.+..++.
T Consensus 192 ---------------------~~~a~----~i~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~ 237 (259)
T PRK06688 192 ---------------------DAQAA----KLAAGPASALRYTKRAINAAT---------LTELEEALAREAAGFGRLLR 237 (259)
T ss_pred ---------------------HHHHH----HHHhCCHHHHHHHHHHHHhhh---------hCCHHHHHHHHHHHHHHHhC
Confidence 34666 889999999999999999876 56899999999999999999
Q ss_pred CCcHHHHHHHHhhCCCCCCCCCC
Q 022721 244 RSDFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 244 ~~d~~egv~a~lv~k~r~P~w~~ 266 (293)
++|+.+|+++|+ +| ++|+|++
T Consensus 238 ~~~~~~~~~af~-~~-~~p~~~~ 258 (259)
T PRK06688 238 TPDFREGATAFI-EK-RKPDFTG 258 (259)
T ss_pred CHHHHHHHHHHH-cC-CCCCCCC
Confidence 999999999999 88 8999975
No 36
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=100.00 E-value=7.7e-35 Score=264.19 Aligned_cols=172 Identities=17% Similarity=0.224 Sum_probs=153.3
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcC
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTG 88 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG 88 (293)
..++..+..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. .+++|++||
T Consensus 87 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~~~vG~~-~a~~l~l~g 165 (259)
T TIGR01929 87 LDVQRQIRTCPKPVIAMVNGYAIGGGHVLHVVCDLTIAAENARFGQTGPKVGSFDGGYGSSYLARIVGQK-KAREIWFLC 165 (259)
T ss_pred HHHHHHHHhCCCCEEEEEcCEEehHHHHHHHhCCEEEecCCCEecCcccccccCCCccHHHHHHHHhHHH-HHHHHHHhC
Confidence 4567789999999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred CCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHH
Q 022721 89 KRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQ 168 (293)
Q Consensus 89 ~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~ 168 (293)
++++ |+||+++||+|++||++++.+.+
T Consensus 166 ~~~~-a~eA~~~Glv~~vv~~~~l~~~a---------------------------------------------------- 192 (259)
T TIGR01929 166 RQYD-AEQALDMGLVNTVVPLADLEKET---------------------------------------------------- 192 (259)
T ss_pred CccC-HHHHHHcCCcccccCHHHHHHHH----------------------------------------------------
Confidence 9999 99999999999999977665533
Q ss_pred HHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcHH
Q 022721 169 IIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFA 248 (293)
Q Consensus 169 i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~~ 248 (293)
.++|+ +|++.||.+++.+|++++... . .....+..|.+.+..++.++|+.
T Consensus 193 ----------------~~~a~----~la~~~~~a~~~~K~~l~~~~---------~-~~~~~~~~e~~~~~~~~~~~d~~ 242 (259)
T TIGR01929 193 ----------------VRWCR----EILQKSPMAIRMLKAALNADC---------D-GQAGLQELAGNATMLFYMTEEGQ 242 (259)
T ss_pred ----------------HHHHH----HHHhCCHHHHHHHHHHHHhhh---------c-cchHHHHHHHHHHHHHhcCccHH
Confidence 34666 999999999999999998765 2 23455566777778889999999
Q ss_pred HHHHHHhhCCCCCCCCCC
Q 022721 249 EGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 249 egv~a~lv~k~r~P~w~~ 266 (293)
||+++|+ +| |+|+|+.
T Consensus 243 egi~af~-~k-r~p~~~~ 258 (259)
T TIGR01929 243 EGRNAFL-EK-RQPDFSK 258 (259)
T ss_pred HHHHHHh-cc-CCCCCCC
Confidence 9999999 88 8999974
No 37
>PRK06210 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8.6e-35 Score=265.56 Aligned_cols=173 Identities=21% Similarity=0.327 Sum_probs=157.8
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcC
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTG 88 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG 88 (293)
.+++.+|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. .+++|++||
T Consensus 98 ~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~-~a~~l~ltg 176 (272)
T PRK06210 98 QTRYHFLTALRKPVIAAINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILPRLVGHA-NALDLLLSA 176 (272)
T ss_pred HHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEeCCCEEechHHhcCCCCCCchhhhhHhhhCHH-HHHHHHHcC
Confidence 3456789999999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred CCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHH
Q 022721 89 KRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQ 168 (293)
Q Consensus 89 ~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~ 168 (293)
+.++ |++|+++||+|+++|++++.+.+
T Consensus 177 ~~~~-a~eA~~~Glv~~vv~~~~l~~~a---------------------------------------------------- 203 (272)
T PRK06210 177 RTFY-AEEALRLGLVNRVVPPDELMERT---------------------------------------------------- 203 (272)
T ss_pred CccC-HHHHHHcCCcceecCHHHHHHHH----------------------------------------------------
Confidence 9999 99999999999999876655432
Q ss_pred HHHHHHhcccccchhHHHHHHHHHHHHhcc-CcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcH
Q 022721 169 IIEELKKHQSSAETSVAQWADEALQGMGKG-APFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDF 247 (293)
Q Consensus 169 i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~-sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~ 247 (293)
.+||+ +|.++ +|.+++.+|+++++.. ..++++.++.|...+..++.++|+
T Consensus 204 ----------------~~~a~----~i~~~~~p~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~~~~~~ 254 (272)
T PRK06210 204 ----------------LAYAE----DLARNVSPASMAVIKRQLYEDA---------FQTLAEATARANREMHESLQRPDF 254 (272)
T ss_pred ----------------HHHHH----HHHhcCCHHHHHHHHHHHHhcc---------cCCHHHHHHHHHHHHHHHhcCccH
Confidence 35666 88875 9999999999999876 567999999999999999999999
Q ss_pred HHHHHHHhhCCCCCCCCCC
Q 022721 248 AEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 248 ~egv~a~lv~k~r~P~w~~ 266 (293)
+||+++|+ +| |+|.|.+
T Consensus 255 ~egi~af~-~k-r~p~~~~ 271 (272)
T PRK06210 255 IEGVASFL-EK-RPPRFPG 271 (272)
T ss_pred HHHHHHHh-cc-CCCCCCC
Confidence 99999999 88 8999974
No 38
>PRK08260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=9.9e-35 Score=268.27 Aligned_cols=175 Identities=19% Similarity=0.252 Sum_probs=152.7
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcC
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTG 88 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG 88 (293)
..++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. .+++|++||
T Consensus 103 ~~~~~~l~~~pkPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~-~A~~llltg 181 (296)
T PRK08260 103 GRVTLRIFDSLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAASSWFLPRLVGLQ-TALEWVYSG 181 (296)
T ss_pred HHHHHHHHhCCCCEEEEECCeeehHhHHHHHhCCEEEeeCCCEEecchhhcCcCCCcchhhhHHHhhCHH-HHHHHHHcC
Confidence 4577889999999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred CCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHH
Q 022721 89 KRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQ 168 (293)
Q Consensus 89 ~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~ 168 (293)
++++ |+||+++||||++||++++.+.+
T Consensus 182 ~~~~-a~eA~~~GLv~~vv~~~~l~~~a---------------------------------------------------- 208 (296)
T PRK08260 182 RVFD-AQEALDGGLVRSVHPPDELLPAA---------------------------------------------------- 208 (296)
T ss_pred CccC-HHHHHHCCCceeecCHHHHHHHH----------------------------------------------------
Confidence 9999 99999999999999976655532
Q ss_pred HHHHHHhcccccchhHHHHHHHHHHHHhcc-CcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcH
Q 022721 169 IIEELKKHQSSAETSVAQWADEALQGMGKG-APFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDF 247 (293)
Q Consensus 169 i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~-sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~ 247 (293)
.++++ +|.++ +|.+++.+|++++..... ..... ....|...+..++.++|+
T Consensus 209 ----------------~~~a~----~i~~~~~~~a~~~~K~~l~~~~~~-------~~~~~-~~~~e~~~~~~~~~~~d~ 260 (296)
T PRK08260 209 ----------------RALAR----EIADNTSPVSVALTRQMMWRMAGA-------DHPME-AHRVDSRAIYSRGRSGDG 260 (296)
T ss_pred ----------------HHHHH----HHHhcCChHHHHHHHHHHHhcccC-------CCcHH-HHHHHHHHHHHHccChhH
Confidence 34666 88885 999999999999876300 12233 335577777788899999
Q ss_pred HHHHHHHhhCCCCCCCCCCC
Q 022721 248 AEGVRAVLVDKDQNPKWNPA 267 (293)
Q Consensus 248 ~egv~a~lv~k~r~P~w~~~ 267 (293)
.||+++|+ +| |+|.|+++
T Consensus 261 ~egi~af~-~k-r~p~f~~~ 278 (296)
T PRK08260 261 KEGVSSFL-EK-RPAVFPGK 278 (296)
T ss_pred HHHHHHHh-cC-CCCCCCCC
Confidence 99999999 88 89999986
No 39
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional
Probab=100.00 E-value=1.1e-34 Score=263.46 Aligned_cols=180 Identities=17% Similarity=0.212 Sum_probs=159.1
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 83 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~ 83 (293)
|.+....++..|..+|||+||++||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. .+++
T Consensus 81 ~~~~~~~l~~~i~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~g~~~~l~~~vg~~-~a~~ 159 (261)
T PRK11423 81 YDDPLRQILRMIQKFPKPVIAMVEGSVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDAGFH-IVKE 159 (261)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEecEEechHHHHHHhCCEEEecCCCEecCchhhcCCCCCccHHHHHHHHhHHH-HHHH
Confidence 444456788899999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCC
Q 022721 84 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 163 (293)
Q Consensus 84 l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~ 163 (293)
|++||++++ |+||+++||||++||++++.+.+
T Consensus 160 l~l~g~~~~-a~eA~~~GLv~~vv~~~~l~~~a----------------------------------------------- 191 (261)
T PRK11423 160 MFFTASPIT-AQRALAVGILNHVVEVEELEDFT----------------------------------------------- 191 (261)
T ss_pred HHHcCCCcC-HHHHHHcCCcCcccCHHHHHHHH-----------------------------------------------
Confidence 999999999 99999999999999977666543
Q ss_pred CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCH-HHHHHHHHHHHHhhC
Q 022721 164 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKL-SGVMKYEYRVALRSS 242 (293)
Q Consensus 164 ~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~-~e~l~~e~~~~~~~~ 242 (293)
.++++ +|++.||.+++.+|++++... ....+ ++.++.|......++
T Consensus 192 ---------------------~~~a~----~l~~~~~~a~~~~K~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 238 (261)
T PRK11423 192 ---------------------LQMAH----HISEKAPLAIAVIKEQLRVLG--------EAHPMNPDEFERIQGLRRAVY 238 (261)
T ss_pred ---------------------HHHHH----HHHhcCHHHHHHHHHHHHhhc--------ccCCcchHHHHHHHHHHHHHh
Confidence 34555 899999999999999998654 11233 678888888888899
Q ss_pred CCCcHHHHHHHHhhCCCCCCCCCCC
Q 022721 243 LRSDFAEGVRAVLVDKDQNPKWNPA 267 (293)
Q Consensus 243 ~~~d~~egv~a~lv~k~r~P~w~~~ 267 (293)
.++|++||+.+|+ +| |+|+|+++
T Consensus 239 ~s~d~~eg~~af~-~k-r~p~~~~~ 261 (261)
T PRK11423 239 DSEDYQEGMNAFL-EK-RKPVFVGH 261 (261)
T ss_pred CChhHHHHHHHHh-cc-CCCCCCCC
Confidence 9999999999999 89 89999753
No 40
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated
Probab=100.00 E-value=9.9e-35 Score=264.34 Aligned_cols=174 Identities=21% Similarity=0.334 Sum_probs=154.4
Q ss_pred HHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhh
Q 022721 7 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM 86 (293)
Q Consensus 7 ~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~l 86 (293)
..+.++..+..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++ ++++++|.. .+++|++
T Consensus 89 ~~~~~~~~l~~~~kPvIaaV~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~~~~-~l~~~vG~~-~a~~l~l 166 (265)
T PRK05674 89 ELAELMYNLYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISP-FVVKAIGER-AARRYAL 166 (265)
T ss_pred HHHHHHHHHHcCCCCEEEEEcCEEEechhhHhhhcCEEEEeCCCEEeCcccccCCCcchhHH-HHHHHhCHH-HHHHHHH
Confidence 34677888999999999999999999999999999999999999999999999999998876 588889998 9999999
Q ss_pred cCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCH
Q 022721 87 TGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSV 166 (293)
Q Consensus 87 tG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~ 166 (293)
||+.++ |+||+++||||++||.+++.+.+
T Consensus 167 tg~~~~-a~eA~~~Glv~~vv~~~~l~~~a-------------------------------------------------- 195 (265)
T PRK05674 167 TAERFD-GRRARELGLLAESYPAAELEAQV-------------------------------------------------- 195 (265)
T ss_pred hCcccC-HHHHHHCCCcceecCHHHHHHHH--------------------------------------------------
Confidence 999999 99999999999999977666543
Q ss_pred HHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHH-HHHHHHhhCCCC
Q 022721 167 RQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKY-EYRVALRSSLRS 245 (293)
Q Consensus 167 ~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~-e~~~~~~~~~~~ 245 (293)
.+|+. +|+++||.+++.+|++++... ..++.+.+.. +...+..++.++
T Consensus 196 ------------------~~~a~----~la~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~s~ 244 (265)
T PRK05674 196 ------------------EAWIA----NLLLNSPQALRASKDLLREVG---------DGELSPALRRYCENAIARIRVSA 244 (265)
T ss_pred ------------------HHHHH----HHHhcCHHHHHHHHHHHHHhh---------ccChhHHHHHHHHHHHHHHhcCH
Confidence 35676 899999999999999999876 5567788765 445667778999
Q ss_pred cHHHHHHHHhhCCCCCCCCCC
Q 022721 246 DFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 246 d~~egv~a~lv~k~r~P~w~~ 266 (293)
|++||+++|+ +| |+|.|..
T Consensus 245 d~~e~~~af~-~k-r~p~~~~ 263 (265)
T PRK05674 245 EGQEGLRAFL-EK-RTPAWQT 263 (265)
T ss_pred HHHHHHHHHH-cc-CCCCCCC
Confidence 9999999999 88 8999975
No 41
>PRK07327 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-34 Score=263.41 Aligned_cols=177 Identities=15% Similarity=0.178 Sum_probs=152.7
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 83 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~ 83 (293)
++...+.++..|..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++
T Consensus 91 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~ 169 (268)
T PRK07327 91 VWREARDLVYNVINCDKPIVSAIHGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGMA-KAKY 169 (268)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEcCeeeehhhHHHHhCCEEEecCCCEEeCcccccCCCCCcchhhHHHHHhCHH-HHHH
Confidence 344556788899999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCC
Q 022721 84 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 163 (293)
Q Consensus 84 l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~ 163 (293)
|++||++++ |+||+++||||+++|++++.+.+
T Consensus 170 l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------------------------------------- 201 (268)
T PRK07327 170 YLLLCEPVS-GEEAERIGLVSLAVDDDELLPKA----------------------------------------------- 201 (268)
T ss_pred HHHcCCccC-HHHHHHcCCcceecCHHHHHHHH-----------------------------------------------
Confidence 999999999 99999999999999987766643
Q ss_pred CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCC
Q 022721 164 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 243 (293)
Q Consensus 164 ~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~ 243 (293)
.++|+ +|++++|.+++.+|++++..... ....+++.+..+. .++.
T Consensus 202 ---------------------~~~a~----~la~~~~~a~~~~K~~l~~~~~~------~~~~~~~~~~~~~----~~~~ 246 (268)
T PRK07327 202 ---------------------LEVAE----RLAAGSQTAIRWTKYALNNWLRM------AGPTFDTSLALEF----MGFS 246 (268)
T ss_pred ---------------------HHHHH----HHHcCCHHHHHHHHHHHHHhhhh------hhhhHHHHHHHHH----HHcc
Confidence 34666 99999999999999999865300 0123555554442 4678
Q ss_pred CCcHHHHHHHHhhCCCCCCCCCC
Q 022721 244 RSDFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 244 ~~d~~egv~a~lv~k~r~P~w~~ 266 (293)
++|+.||+.+|+ +| |+|+|++
T Consensus 247 ~~d~~eg~~af~-ek-r~p~~~~ 267 (268)
T PRK07327 247 GPDVREGLASLR-EK-RAPDFPG 267 (268)
T ss_pred ChhHHHHHHHHH-hc-CCCCCCC
Confidence 999999999999 88 8999975
No 42
>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=3e-35 Score=261.21 Aligned_cols=172 Identities=22% Similarity=0.288 Sum_probs=159.9
Q ss_pred HHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcCC
Q 022721 10 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGK 89 (293)
Q Consensus 10 ~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG~ 89 (293)
..+..+.+.+||+||++||+|+|||++|+++||+|||+++++|++|+.++|++|.||++.+|+|++|.+ +|+++++||+
T Consensus 118 ~~~~~~~~~~KPvIaainG~AlgGG~ELalmCDirva~~~Akfg~~~~~~Gi~p~~GGT~rl~r~vG~s-~Ale~~ltg~ 196 (290)
T KOG1680|consen 118 RVWDLVSRLKKPVIAAINGFALGGGLELALMCDIRVAGEGAKFGFFEIRMGIIPSWGGTQRLPRIVGKS-RALEMILTGR 196 (290)
T ss_pred chhhhhhhcccceeEeeeceeeccchhhhhhcceEeccCCCeecccccccCCccCCCchhhHHHHhChH-HHHHHHHhcC
Confidence 345566689999999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred CCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHHH
Q 022721 90 RISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQI 169 (293)
Q Consensus 90 ~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~i 169 (293)
+++ |+||.++|||++|||.+++...+
T Consensus 197 ~~~-AqeA~~~GlVn~Vvp~~~~l~eA----------------------------------------------------- 222 (290)
T KOG1680|consen 197 RLG-AQEAKKIGLVNKVVPSGDALGEA----------------------------------------------------- 222 (290)
T ss_pred ccc-HHHHHhCCceeEeecchhHHHHH-----------------------------------------------------
Confidence 999 99999999999999988744422
Q ss_pred HHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcHHH
Q 022721 170 IEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAE 249 (293)
Q Consensus 170 ~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~~e 249 (293)
.+|++ +|+++||..++..|++++.+. ..++.+++++|...+...+..+|..|
T Consensus 223 ---------------v~l~~----~Ia~~~~~~v~~~K~svn~~~---------e~~l~e~l~~e~~~~~s~~~~~d~~E 274 (290)
T KOG1680|consen 223 ---------------VKLAE----QIAKNSPLVVRADKESVNAAY---------ETTLFEGLELERDLFGSTFATEDRLE 274 (290)
T ss_pred ---------------HHHHH----HHHhCCHHHHHHHHHHHHHHh---------hccHHHHHHhhhhhhhhhhhhHHHHH
Confidence 45887 999999999999999999977 77899999999999999999999999
Q ss_pred HHHHHhhCCCCCCCCCC
Q 022721 250 GVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 250 gv~a~lv~k~r~P~w~~ 266 (293)
|+.+|. +| |+|+|+.
T Consensus 275 g~~~f~-~k-r~~~~~k 289 (290)
T KOG1680|consen 275 GMTAFA-EK-RKPKFSK 289 (290)
T ss_pred HHHHhc-cc-CCccccc
Confidence 999997 88 8999985
No 43
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.9e-34 Score=263.92 Aligned_cols=177 Identities=20% Similarity=0.243 Sum_probs=155.2
Q ss_pred HHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCC-CchHHHHHhcCCCcHHHHHHH
Q 022721 6 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFP-DVGFSYIAAKGPGGGSVGAYL 84 (293)
Q Consensus 6 ~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p-~~g~~~~l~r~~G~~~~a~~l 84 (293)
+....++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++|++++|++++|.. .+++|
T Consensus 96 ~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~-~A~~l 174 (276)
T PRK05864 96 ELLDDVILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSS-RAFEI 174 (276)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCEeehhHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHhhhCHH-HHHHH
Confidence 3445677889999999999999999999999999999999999999999999999997 789999999999998 99999
Q ss_pred hhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCC
Q 022721 85 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEK 164 (293)
Q Consensus 85 ~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~ 164 (293)
++||++++ |+||+++||+|++||++++.+.+
T Consensus 175 ~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a------------------------------------------------ 205 (276)
T PRK05864 175 MLTGRDVD-AEEAERIGLVSRQVPDEQLLDTC------------------------------------------------ 205 (276)
T ss_pred HHcCCccC-HHHHHHcCCcceeeCHHHHHHHH------------------------------------------------
Confidence 99999999 99999999999999987666533
Q ss_pred CHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccC-CHHHHHHHHHHHH-HhhC
Q 022721 165 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELS-KLSGVMKYEYRVA-LRSS 242 (293)
Q Consensus 165 t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~-~~~e~l~~e~~~~-~~~~ 242 (293)
.+||+ +|...||.+++.+|++++... .. ++.+.+..|.... ...+
T Consensus 206 --------------------~~~a~----~la~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~~e~~~~~~~~~ 252 (276)
T PRK05864 206 --------------------YAIAA----RMAGFSRPGIELTKRTLWSGL---------DAASLEAHMQAEGLGQLFVRL 252 (276)
T ss_pred --------------------HHHHH----HHHhCCHHHHHHHHHHHHhhc---------ccCCHHHHHHHHHHHHHHHhc
Confidence 35676 899999999999999998765 33 6888887776532 2357
Q ss_pred CCCcHHHHHHHHhhCCCCCCCCCCC
Q 022721 243 LRSDFAEGVRAVLVDKDQNPKWNPA 267 (293)
Q Consensus 243 ~~~d~~egv~a~lv~k~r~P~w~~~ 267 (293)
.++|+.||+++|+ +| |+|+|++.
T Consensus 253 ~~~d~~e~~~af~-~k-r~p~~~~~ 275 (276)
T PRK05864 253 LTANFEEAVAARA-EK-RPPVFTDD 275 (276)
T ss_pred cChhHHHHHHHHh-cc-CCCCCCCC
Confidence 8999999999999 88 89999864
No 44
>PRK06495 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2e-34 Score=261.21 Aligned_cols=174 Identities=21% Similarity=0.318 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHH
Q 022721 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 84 (293)
Q Consensus 5 ~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l 84 (293)
+...++++.++..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|+. |+++.+++++|.. .+++|
T Consensus 83 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~---~~~~~l~~~~g~~-~a~~l 158 (257)
T PRK06495 83 NRRTRECFHAIRECAKPVIAAVNGPALGAGLGLVASCDIIVASENAVFGLPEIDVGLA---GGGKHAMRLFGHS-LTRRM 158 (257)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEeeChhhccCcc---ccHHHHHHHhCHH-HHHHH
Confidence 3445667888999999999999999999999999999999999999999999999997 4566799999998 99999
Q ss_pred hhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCC
Q 022721 85 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEK 164 (293)
Q Consensus 85 ~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~ 164 (293)
++||+.++ |++|+++||+|++||++++.+.+
T Consensus 159 ll~g~~~~-a~eA~~~GLv~~vv~~~~~~~~a------------------------------------------------ 189 (257)
T PRK06495 159 MLTGYRVP-AAELYRRGVIEACLPPEELMPEA------------------------------------------------ 189 (257)
T ss_pred HHcCCeeC-HHHHHHcCCcceecCHHHHHHHH------------------------------------------------
Confidence 99999999 99999999999999987766543
Q ss_pred CHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCC
Q 022721 165 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLR 244 (293)
Q Consensus 165 t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~ 244 (293)
.++++ +|+++||.+++.+|++++... ..++.++++.|...+..++.+
T Consensus 190 --------------------~~~a~----~l~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~~s 236 (257)
T PRK06495 190 --------------------MEIAR----EIASKSPLATRLAKDALNTIE---------NMSLRDGYRYEQDITAKLAKT 236 (257)
T ss_pred --------------------HHHHH----HHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHHhcC
Confidence 34666 999999999999999999876 568999999999999999999
Q ss_pred CcHHHHHHHHhhCCCCCCCCCC
Q 022721 245 SDFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 245 ~d~~egv~a~lv~k~r~P~w~~ 266 (293)
+|++||+++|+ +| |+|+|++
T Consensus 237 ~d~~egi~af~-~k-r~p~~~~ 256 (257)
T PRK06495 237 EDAKEAQRAFL-EK-RPPVFKG 256 (257)
T ss_pred hHHHHHHHHHh-cc-CCCCCCC
Confidence 99999999999 88 8999975
No 45
>PRK06143 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.9e-34 Score=259.99 Aligned_cols=170 Identities=19% Similarity=0.249 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 83 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~ 83 (293)
|+.....++..|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|+ |++|++++|++++|.. .+++
T Consensus 85 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~-p~~~~~~~l~~~iG~~-~a~~ 162 (256)
T PRK06143 85 FISRLRDLCDAVRHFPVPVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRVGI-PSVIHAALLPRLIGWA-RTRW 162 (256)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEecCCCEEeCCccccCC-CCccHHHHHHHhcCHH-HHHH
Confidence 4555667888999999999999999999999999999999999999999999999997 8888899999999998 9999
Q ss_pred HhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCC
Q 022721 84 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 163 (293)
Q Consensus 84 l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~ 163 (293)
|++||+.++ |+||+++||+|++||++++.+.+
T Consensus 163 l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------------------------------------- 194 (256)
T PRK06143 163 LLLTGETID-AAQALAWGLVDRVVPLAELDAAV----------------------------------------------- 194 (256)
T ss_pred HHHcCCcCC-HHHHHHCCCcCeecCHHHHHHHH-----------------------------------------------
Confidence 999999999 99999999999999987766543
Q ss_pred CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCC
Q 022721 164 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 243 (293)
Q Consensus 164 ~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~ 243 (293)
.++|+ +|+.+||.+++.+|++++... ..++++.+..|...+..++.
T Consensus 195 ---------------------~~~a~----~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~~ 240 (256)
T PRK06143 195 ---------------------ERLAA----SLAGCGPQALRQQKRLLREWE---------DMPLDVAIDDSVAEFGAAFL 240 (256)
T ss_pred ---------------------HHHHH----HHHcCCHHHHHHHHHHHHHHc---------cCCHHHHHHHHHHHHHHHhc
Confidence 34666 899999999999999999876 56799999999999999999
Q ss_pred CCcHHHHHHHHhhCC
Q 022721 244 RSDFAEGVRAVLVDK 258 (293)
Q Consensus 244 ~~d~~egv~a~lv~k 258 (293)
++|++||+++|+ +|
T Consensus 241 ~~d~~e~~~af~-ek 254 (256)
T PRK06143 241 TGEPQRHMAAFL-NR 254 (256)
T ss_pred ChHHHHHHHHHH-hh
Confidence 999999999999 77
No 46
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.
Probab=100.00 E-value=3.5e-34 Score=258.76 Aligned_cols=176 Identities=17% Similarity=0.240 Sum_probs=152.5
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 83 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~ 83 (293)
+++...+++.++..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++ ++++|++++|.. .+++
T Consensus 74 ~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~-~~~~l~~~vg~~-~a~~ 151 (251)
T TIGR03189 74 MLASLHKLVIAMLDSPVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAPA-ASCLLPERMGRV-AAED 151 (251)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEecCeeeeHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCc-hHHHHHHHhCHH-HHHH
Confidence 44555678889999999999999999999999999999999999999999999999999874 567899999998 9999
Q ss_pred HhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCC
Q 022721 84 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 163 (293)
Q Consensus 84 l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~ 163 (293)
|++||++++ |+||+++||+|+++++.. +..
T Consensus 152 l~ltg~~~~-a~eA~~~Glv~~v~~~~~--~~a----------------------------------------------- 181 (251)
T TIGR03189 152 LLYSGRSID-GAEGARIGLANAVAEDPE--NAA----------------------------------------------- 181 (251)
T ss_pred HHHcCCCCC-HHHHHHCCCcceecCcHH--HHH-----------------------------------------------
Confidence 999999999 999999999999997432 111
Q ss_pred CCHHHHHHHHHhcccccchhHHHH-HHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHH-HHHHHHHHhh
Q 022721 164 KSVRQIIEELKKHQSSAETSVAQW-ADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVM-KYEYRVALRS 241 (293)
Q Consensus 164 ~t~~~i~~~l~~~~~~~~~~~~~~-a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l-~~e~~~~~~~ 241 (293)
.++ ++ +|+++||.+++.+|++++... ..++++.+ ..|......+
T Consensus 182 ---------------------~~~~a~----~la~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~~e~~~~~~~ 227 (251)
T TIGR03189 182 ---------------------LAWFDE----HPAKLSASSLRFAVRAARLGM---------NERVKAKIAEVEALYLEEL 227 (251)
T ss_pred ---------------------HHHHHH----HHHhCCHHHHHHHHHHHHhhh---------cccHHHHHHHHHHHHHHHH
Confidence 123 34 899999999999999998776 55677766 3677778888
Q ss_pred CCCCcHHHHHHHHhhCCCCCCCCCCC
Q 022721 242 SLRSDFAEGVRAVLVDKDQNPKWNPA 267 (293)
Q Consensus 242 ~~~~d~~egv~a~lv~k~r~P~w~~~ 267 (293)
+.++|+.||+++|+ +| |+|.|.++
T Consensus 228 ~~s~d~~eg~~af~-ek-r~p~~~~~ 251 (251)
T TIGR03189 228 MATHDAVEGLNAFL-EK-RPALWEDR 251 (251)
T ss_pred hCCHhHHHHHHHHH-hc-CCCCCCCC
Confidence 99999999999999 88 89999753
No 47
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.
Probab=100.00 E-value=4e-34 Score=259.11 Aligned_cols=172 Identities=19% Similarity=0.224 Sum_probs=149.0
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhc
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMT 87 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~lt 87 (293)
...++..|..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|+.+++++|++++|.. .+++|++|
T Consensus 83 ~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~~~~~~~~~l~~~vG~~-~A~~lll~ 161 (256)
T TIGR03210 83 MEELHSAIRDVPKPVIARVQGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVGSVDPGYGTALLARVVGEK-KAREIWYL 161 (256)
T ss_pred HHHHHHHHHhCCCCEEEEECCEEehhhHHHHHhCCEEEEeCCCEEecccccccccCCccHHHHHHHHhCHH-HHHHHHHh
Confidence 35678889999999999999999999999999999999999999999999999998877888999999998 99999999
Q ss_pred CCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHH
Q 022721 88 GKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVR 167 (293)
Q Consensus 88 G~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~ 167 (293)
|++++ |+||+++||||++||++++.+.+
T Consensus 162 g~~~~-a~eA~~~Glv~~vv~~~~l~~~a--------------------------------------------------- 189 (256)
T TIGR03210 162 CRRYT-AQEALAMGLVNAVVPHDQLDAEV--------------------------------------------------- 189 (256)
T ss_pred CCCcC-HHHHHHcCCceeeeCHHHHHHHH---------------------------------------------------
Confidence 99999 99999999999999977666543
Q ss_pred HHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCH-HHHHHHHHHHHHhhCCCCc
Q 022721 168 QIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKL-SGVMKYEYRVALRSSLRSD 246 (293)
Q Consensus 168 ~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~-~e~l~~e~~~~~~~~~~~d 246 (293)
.++|+ +|++.||.+++.+|++++... .... .+.+ |...+..++.++|
T Consensus 190 -----------------~~~a~----~ia~~~~~a~~~~K~~l~~~~---------~~~~~~~~~--~~~~~~~~~~~~d 237 (256)
T TIGR03210 190 -----------------QKWCD----EIVEKSPTAIAIAKRSFNMDT---------AHQRGIAGM--GMYALKLYYDTAE 237 (256)
T ss_pred -----------------HHHHH----HHHhCCHHHHHHHHHHHHHhh---------cccchHHHH--HHHHHHHHccChh
Confidence 34666 899999999999999998764 2111 1222 3456667789999
Q ss_pred HHHHHHHHhhCCCCCCCCCC
Q 022721 247 FAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 247 ~~egv~a~lv~k~r~P~w~~ 266 (293)
+.||+++|+ +| |+|.|++
T Consensus 238 ~~e~~~af~-~k-r~p~~~~ 255 (256)
T TIGR03210 238 SREGVKAFQ-EK-RKPEFRK 255 (256)
T ss_pred HHHHHHHHh-cc-CCCCCCC
Confidence 999999999 88 8999974
No 48
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated
Probab=100.00 E-value=4.7e-34 Score=261.21 Aligned_cols=168 Identities=23% Similarity=0.276 Sum_probs=151.1
Q ss_pred HHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhh
Q 022721 7 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM 86 (293)
Q Consensus 7 ~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~l 86 (293)
..+.++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. .+++|++
T Consensus 92 ~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~-~a~~lll 170 (275)
T PRK09120 92 EAYGWWRRLRWYQKPTIAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGHR-DALYYIM 170 (275)
T ss_pred HHHHHHHHHHhCCCCEEEEEcCEEechhHHHHHhCCEEEEeCCcEecCCccccCCCCCcchHHHHHHHcCHH-HHHHHHh
Confidence 345678889999999999999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred cCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCH
Q 022721 87 TGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSV 166 (293)
Q Consensus 87 tG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~ 166 (293)
||++++ |+||+++||||++||++++++.+
T Consensus 171 tg~~~~-A~eA~~~Glv~~vv~~~~l~~~a-------------------------------------------------- 199 (275)
T PRK09120 171 TGETFT-GRKAAEMGLVNESVPLAQLRART-------------------------------------------------- 199 (275)
T ss_pred cCCccC-HHHHHHcCCcceecCHHHHHHHH--------------------------------------------------
Confidence 999999 99999999999999988777643
Q ss_pred HHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHH--HHhhCCC
Q 022721 167 RQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV--ALRSSLR 244 (293)
Q Consensus 167 ~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~--~~~~~~~ 244 (293)
.++++ +|+++||.+++.+|++++... ..++.+.++.|... ...++.+
T Consensus 200 ------------------~~~a~----~la~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~~~ 248 (275)
T PRK09120 200 ------------------RELAA----KLLEKNPVVLRAAKDGFKRVR---------ELTWDQAEDYLYAKLEQANSLDP 248 (275)
T ss_pred ------------------HHHHH----HHHhCCHHHHHHHHHHHHHHH---------hCCHHHHHHHHHHHHHHHHhhCC
Confidence 34666 899999999999999999887 56789998887643 4456788
Q ss_pred C-cHHHHHHHHhhCC
Q 022721 245 S-DFAEGVRAVLVDK 258 (293)
Q Consensus 245 ~-d~~egv~a~lv~k 258 (293)
+ |+.||+++|+ +|
T Consensus 249 ~~d~~eg~~afl-~k 262 (275)
T PRK09120 249 EGGREEGLKQFL-DD 262 (275)
T ss_pred HHHHHHHHHHHH-hc
Confidence 8 9999999999 65
No 49
>PRK07509 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6e-34 Score=258.63 Aligned_cols=170 Identities=21% Similarity=0.222 Sum_probs=154.3
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcC
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTG 88 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG 88 (293)
..++..+..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. .+++|++||
T Consensus 92 ~~~~~~~~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~-~a~~l~ltg 170 (262)
T PRK07509 92 QRVSLGWRRLPVPVIAALEGVCFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVRKD-VARELTYTA 170 (262)
T ss_pred HHHHHHHHhCCCCEEEEECCeeecchHHHHHhCCEEEecCCCEeecchhccCCCCCchHHHHHHHHhCHH-HHHHHHHcC
Confidence 3456678899999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred CCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHH
Q 022721 89 KRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQ 168 (293)
Q Consensus 89 ~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~ 168 (293)
++++ |++|+++||+|++++. +.+.
T Consensus 171 ~~~~-a~eA~~~Glv~~vv~~--~~~~----------------------------------------------------- 194 (262)
T PRK07509 171 RVFS-AEEALELGLVTHVSDD--PLAA----------------------------------------------------- 194 (262)
T ss_pred CCcC-HHHHHHcCChhhhhch--HHHH-----------------------------------------------------
Confidence 9999 9999999999999852 2221
Q ss_pred HHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcHH
Q 022721 169 IIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFA 248 (293)
Q Consensus 169 i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~~ 248 (293)
+.++++ +|++.+|.+++.+|+++++.. ..++.+++..|.+.+..++.++|+.
T Consensus 195 ---------------a~~~a~----~l~~~~~~~~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~~d~~ 246 (262)
T PRK07509 195 ---------------ALALAR----EIAQRSPDAIAAAKRLINRSW---------TASVRALLARESVEQIRLLLGKNQK 246 (262)
T ss_pred ---------------HHHHHH----HHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHHhcChhHH
Confidence 135666 899999999999999999876 5678999999999999999999999
Q ss_pred HHHHHHhhCCCCCCCCC
Q 022721 249 EGVRAVLVDKDQNPKWN 265 (293)
Q Consensus 249 egv~a~lv~k~r~P~w~ 265 (293)
||+++|+ +| |+|.|.
T Consensus 247 e~~~af~-ek-r~p~~~ 261 (262)
T PRK07509 247 IAVKAQM-KK-RAPKFL 261 (262)
T ss_pred HHHHHHh-cC-CCCCCC
Confidence 9999999 88 899996
No 50
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.6e-34 Score=256.87 Aligned_cols=172 Identities=17% Similarity=0.254 Sum_probs=155.5
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 83 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~ 83 (293)
+....+.++.+|..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. .+++
T Consensus 71 ~~~~~~~~~~~l~~~~kP~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~-~a~~ 149 (243)
T PRK07854 71 FPDALIEMLHAIDAAPVPVIAAINGPAIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSLVGGG-RARA 149 (243)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEecCcccccHHHHHHhCCEEEEcCCCEEeccccccccCCCccHHHHHHHHhCHH-HHHH
Confidence 445556788899999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCC
Q 022721 84 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 163 (293)
Q Consensus 84 l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~ 163 (293)
|++||++++ |+||+++||+|++++ ++.
T Consensus 150 l~ltg~~~~-a~eA~~~Glv~~v~~---~~~------------------------------------------------- 176 (243)
T PRK07854 150 MLLGAEKLT-AEQALATGMANRIGT---LAD------------------------------------------------- 176 (243)
T ss_pred HHHcCCCcC-HHHHHHCCCcccccC---HHH-------------------------------------------------
Confidence 999999999 999999999999964 221
Q ss_pred CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCC
Q 022721 164 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 243 (293)
Q Consensus 164 ~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~ 243 (293)
+.+||+ +|.+.||.+++.+|+++++. .++++.++.|...+..++.
T Consensus 177 --------------------a~~~a~----~l~~~~~~a~~~~K~~l~~~-----------~~~~~~~~~e~~~~~~~~~ 221 (243)
T PRK07854 177 --------------------AQAWAA----EIAGLAPLALQHAKRVLNDD-----------GAIEEAWPAHKELFDKAWA 221 (243)
T ss_pred --------------------HHHHHH----HHHhCCHHHHHHHHHHHHcc-----------CCHHHHHHHHHHHHHHHhc
Confidence 135777 89999999999999999753 2589999999999999999
Q ss_pred CCcHHHHHHHHhhCCCCCCCCCC
Q 022721 244 RSDFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 244 ~~d~~egv~a~lv~k~r~P~w~~ 266 (293)
++|+.||+++|+ +| |+|.|++
T Consensus 222 ~~d~~eg~~af~-~k-r~p~~~~ 242 (243)
T PRK07854 222 SQDAIEAQVARI-EK-RPPKFQG 242 (243)
T ss_pred CchHHHHHHHHh-CC-CCCCCCC
Confidence 999999999999 88 8999975
No 51
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=100.00 E-value=4.4e-34 Score=261.09 Aligned_cols=172 Identities=17% Similarity=0.216 Sum_probs=153.7
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcC
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTG 88 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG 88 (293)
..++..+..+|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. .+++|++||
T Consensus 97 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~vG~~-~a~~l~ltg 175 (273)
T PRK07396 97 LDLQRLIRTCPKPVIAMVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQK-KAREIWFLC 175 (273)
T ss_pred HHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEeeCCcEEecccccccccCCchHHHHHHHHhhHH-HHHHHHHhC
Confidence 3566789999999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred CCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHH
Q 022721 89 KRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQ 168 (293)
Q Consensus 89 ~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~ 168 (293)
+.++ |+||+++||||++||++++.+.+
T Consensus 176 ~~~~-A~eA~~~GLv~~vv~~~~l~~~a---------------------------------------------------- 202 (273)
T PRK07396 176 RQYD-AQEALDMGLVNTVVPLADLEKET---------------------------------------------------- 202 (273)
T ss_pred CCcC-HHHHHHcCCcCeecCHHHHHHHH----------------------------------------------------
Confidence 9999 99999999999999977666543
Q ss_pred HHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcHH
Q 022721 169 IIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFA 248 (293)
Q Consensus 169 i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~~ 248 (293)
.++|+ +|++.+|.+++.+|++++... . .++...+.|...+..++.++|+.
T Consensus 203 ----------------~~~a~----~la~~~~~a~~~~K~~l~~~~---------~-~~~~~~~~e~~~~~~~~~~~d~~ 252 (273)
T PRK07396 203 ----------------VRWCR----EMLQNSPMALRCLKAALNADC---------D-GQAGLQELAGNATMLFYMTEEAQ 252 (273)
T ss_pred ----------------HHHHH----HHHhCCHHHHHHHHHHHHhhh---------c-cHHHHHHHHHHHHHHHhcChhHH
Confidence 34666 899999999999999998765 2 35555556777777888999999
Q ss_pred HHHHHHhhCCCCCCCCCC
Q 022721 249 EGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 249 egv~a~lv~k~r~P~w~~ 266 (293)
||+.+|+ +| |+|+|.+
T Consensus 253 egi~af~-~k-r~p~~~~ 268 (273)
T PRK07396 253 EGRNAFN-EK-RQPDFSK 268 (273)
T ss_pred HHHHHHh-CC-CCCCCCC
Confidence 9999999 88 8999985
No 52
>PRK07260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.9e-34 Score=257.81 Aligned_cols=170 Identities=22% Similarity=0.288 Sum_probs=155.9
Q ss_pred HHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHH
Q 022721 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 84 (293)
Q Consensus 5 ~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l 84 (293)
.+..++++.+|..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. .+++|
T Consensus 84 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~-~a~~l 162 (255)
T PRK07260 84 AELVNEISFAIKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAPDAGGLFLLTRAIGLN-RATHL 162 (255)
T ss_pred HHHHHHHHHHHHcCCCCEEEEecCeeehhhHHHHHhCCEEEEeCCCEEechHhhcCCCCCCchhhhhHHhhCHH-HHHHH
Confidence 34456788899999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred hhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCC
Q 022721 85 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEK 164 (293)
Q Consensus 85 ~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~ 164 (293)
++||++++ |++|+++||||+++|++++.+.+
T Consensus 163 ~l~g~~~s-a~eA~~~Glv~~vv~~~~l~~~a------------------------------------------------ 193 (255)
T PRK07260 163 AMTGEALT-AEKALEYGFVYRVAESEKLEKTC------------------------------------------------ 193 (255)
T ss_pred HHhCCccC-HHHHHHcCCcceecCHhHHHHHH------------------------------------------------
Confidence 99999999 99999999999999987765543
Q ss_pred CHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCC
Q 022721 165 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLR 244 (293)
Q Consensus 165 t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~ 244 (293)
.++++ +|++.+|.+++.+|++++... ..++++.+..|......++.+
T Consensus 194 --------------------~~~a~----~la~~~~~a~~~~K~~~~~~~---------~~~~~~~~~~e~~~~~~~~~~ 240 (255)
T PRK07260 194 --------------------EQLLK----KLRRGSSNSYAAIKSLVWESF---------FKGWEDYAKLELALQESLAFK 240 (255)
T ss_pred --------------------HHHHH----HHHcCCHHHHHHHHHHHHHHh---------hcCHHHHHHHHHHHHHHHhcC
Confidence 34566 899999999999999999876 567999999999999999999
Q ss_pred CcHHHHHHHHhhCC
Q 022721 245 SDFAEGVRAVLVDK 258 (293)
Q Consensus 245 ~d~~egv~a~lv~k 258 (293)
+|++||+++|+ +|
T Consensus 241 ~~~~e~~~af~-~k 253 (255)
T PRK07260 241 EDFKEGVRAFS-ER 253 (255)
T ss_pred HHHHHHHHHHH-hc
Confidence 99999999999 76
No 53
>PRK06144 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.4e-34 Score=258.61 Aligned_cols=174 Identities=21% Similarity=0.271 Sum_probs=153.0
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccC-CCCCCCchHHHHHhcCCCcHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENG-IGLFPDVGFSYIAAKGPGGGSVGA 82 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~-lGl~p~~g~~~~l~r~~G~~~~a~ 82 (293)
|.+....++..|..+|||+||+|||+|+|||++|+++||+|||+++++|++||++ +|++|++|++++|++++|.. .++
T Consensus 87 ~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~~G~~p~~g~~~~l~~~vG~~-~a~ 165 (262)
T PRK06144 87 YERRIDRVLGALEQLRVPTIAAIAGACVGGGAAIAAACDLRIATPSARFGFPIARTLGNCLSMSNLARLVALLGAA-RVK 165 (262)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCeeeehHHHHHHhCCEEEecCCCEeechhHHhccCCCCccHHHHHHHHhCHH-HHH
Confidence 3444566788899999999999999999999999999999999999999999996 99999999999999999998 999
Q ss_pred HHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCC
Q 022721 83 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 162 (293)
Q Consensus 83 ~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~ 162 (293)
++++||++++ |+||+++||||++||++++.+.+
T Consensus 166 ~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a---------------------------------------------- 198 (262)
T PRK06144 166 DMLFTARLLE-AEEALAAGLVNEVVEDAALDARA---------------------------------------------- 198 (262)
T ss_pred HHHHcCCCcC-HHHHHHcCCcCeecCHHHHHHHH----------------------------------------------
Confidence 9999999999 99999999999999987665533
Q ss_pred CCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhC
Q 022721 163 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 242 (293)
Q Consensus 163 ~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~ 242 (293)
.++|+ +|++.||.+++.+|++++... ...++ .+...+..++
T Consensus 199 ----------------------~~~a~----~i~~~~~~a~~~~K~~l~~~~---------~~~l~----~~~~~~~~~~ 239 (262)
T PRK06144 199 ----------------------DALAE----LLAAHAPLTLRATKEALRRLR---------REGLP----DGDDLIRMCY 239 (262)
T ss_pred ----------------------HHHHH----HHHhCCHHHHHHHHHHHHHhh---------hcCHH----HHHHHHHHHh
Confidence 34666 899999999999999998765 33343 3455667788
Q ss_pred CCCcHHHHHHHHhhCCCCCCCCCC
Q 022721 243 LRSDFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 243 ~~~d~~egv~a~lv~k~r~P~w~~ 266 (293)
.++|++||+++|+ +| |+|.|.+
T Consensus 240 ~~~~~~e~~~af~-~k-r~p~~~~ 261 (262)
T PRK06144 240 MSEDFREGVEAFL-EK-RPPKWKG 261 (262)
T ss_pred cChHHHHHHHHHh-cC-CCCCCCC
Confidence 9999999999999 88 8999975
No 54
>PRK06072 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.1e-33 Score=253.34 Aligned_cols=174 Identities=23% Similarity=0.278 Sum_probs=154.4
Q ss_pred HHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHH
Q 022721 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 84 (293)
Q Consensus 5 ~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l 84 (293)
...++.++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++| . .++++
T Consensus 75 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~~~~~Gl~p~~g~~~~l~~~~g-~-~a~~l 152 (248)
T PRK06072 75 RETFYPIIREIRFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTG-Q-RFYEI 152 (248)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEecchhhcCcCCCchHHHHHHHHhh-H-HHHHH
Confidence 344567788899999999999999999999999999999999999999999999999999999999999999 4 89999
Q ss_pred hhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCC
Q 022721 85 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEK 164 (293)
Q Consensus 85 ~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~ 164 (293)
++||++++ |+||+++||||.+ +++.+.
T Consensus 153 ll~g~~~~-a~eA~~~Glv~~~---~~~~~~------------------------------------------------- 179 (248)
T PRK06072 153 LVLGGEFT-AEEAERWGLLKIS---EDPLSD------------------------------------------------- 179 (248)
T ss_pred HHhCCccC-HHHHHHCCCcccc---chHHHH-------------------------------------------------
Confidence 99999999 9999999999953 222221
Q ss_pred CHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCC
Q 022721 165 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLR 244 (293)
Q Consensus 165 t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~ 244 (293)
+.++|+ +|++.+|.+++.+|+++++.. ..++++.++.|.+.+..++.+
T Consensus 180 -------------------a~~~a~----~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~~~ 227 (248)
T PRK06072 180 -------------------AEEMAN----RISNGPFQSYIAAKRMINLVL---------YNDLEEFLEYESAIQGYLGKT 227 (248)
T ss_pred -------------------HHHHHH----HHHhCCHHHHHHHHHHHHHHh---------hcCHHHHHHHHHHHHHHHhCC
Confidence 134666 999999999999999999876 567999999999999999999
Q ss_pred CcHHHHHHHHhhCCCCCCCCCCC
Q 022721 245 SDFAEGVRAVLVDKDQNPKWNPA 267 (293)
Q Consensus 245 ~d~~egv~a~lv~k~r~P~w~~~ 267 (293)
+|++||+++|+ +| |+|.|.++
T Consensus 228 ~d~~eg~~af~-~k-r~p~~~~~ 248 (248)
T PRK06072 228 EDFKEGISSFK-EK-REPKFKGI 248 (248)
T ss_pred hhHHHHHHHHh-cC-CCCCCCCC
Confidence 99999999999 88 89999863
No 55
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-33 Score=255.20 Aligned_cols=169 Identities=15% Similarity=0.213 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHh
Q 022721 6 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 85 (293)
Q Consensus 6 ~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ 85 (293)
+....++..|..+|||+||+|||+|+|||++|+++||+||++++++|++||+++|++ |++++|++++|.. .+++|+
T Consensus 81 ~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~Lal~cD~ria~~~a~f~~pe~~~G~~---g~~~~l~~~vg~~-~a~~l~ 156 (249)
T PRK07938 81 RGCFAAFRAVYECAVPVIAAVHGFCLGGGIGLVGNADVIVASDDATFGLPEVDRGAL---GAATHLQRLVPQH-LMRALF 156 (249)
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCEEeehHHHHHHhCCEEEEeCCCEeeCccceecCc---hhHHHHHHhcCHH-HHHHHH
Confidence 344567788999999999999999999999999999999999999999999999986 5567899999998 999999
Q ss_pred hcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCC
Q 022721 86 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKS 165 (293)
Q Consensus 86 ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t 165 (293)
+||+.++ |+||+++||+|++||++++.+.+
T Consensus 157 ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a------------------------------------------------- 186 (249)
T PRK07938 157 FTAATIT-AAELHHFGSVEEVVPRDQLDEAA------------------------------------------------- 186 (249)
T ss_pred HhCCcCC-HHHHHHCCCccEEeCHHHHHHHH-------------------------------------------------
Confidence 9999999 99999999999999977666543
Q ss_pred HHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCC
Q 022721 166 VRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRS 245 (293)
Q Consensus 166 ~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~ 245 (293)
.+||+ +|+.++|.+++.+|++++... ..++++.++.|......++.++
T Consensus 187 -------------------~~~a~----~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~~~~ 234 (249)
T PRK07938 187 -------------------LEVAR----KIAAKDTRVIRAAKEALNGID---------PQDVERSYRWEQGFTFELNLAG 234 (249)
T ss_pred -------------------HHHHH----HHHhCCHHHHHHHHHHHHhhc---------cCCHHHHHHHHHHHHHHHhcCc
Confidence 34666 899999999999999998875 5678999999999888899999
Q ss_pred cHHHHHHHHhhCCCCCC
Q 022721 246 DFAEGVRAVLVDKDQNP 262 (293)
Q Consensus 246 d~~egv~a~lv~k~r~P 262 (293)
|+.||+++|+ +| |+|
T Consensus 235 d~~eg~~af~-ek-r~p 249 (249)
T PRK07938 235 VSDEHRDAFV-EK-RKA 249 (249)
T ss_pred cHHHHHHHHH-hc-CCC
Confidence 9999999999 88 666
No 56
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix. Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....
Probab=100.00 E-value=5.2e-34 Score=256.37 Aligned_cols=173 Identities=26% Similarity=0.410 Sum_probs=161.5
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHH
Q 022721 2 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 81 (293)
Q Consensus 2 ~~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a 81 (293)
..|.+..+.++.++..+|||+||++||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.+ .+
T Consensus 73 ~~~~~~~~~l~~~l~~~~kp~Iaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-~a 151 (245)
T PF00378_consen 73 REFFRRFQELLSRLANFPKPTIAAVNGHAVGGGFELALACDFRIAAEDAKFGFPEVRLGIFPGAGGTFRLPRLIGPS-RA 151 (245)
T ss_dssp HHHHHHHHHHHHHHHHSSSEEEEEESSEEETHHHHHHHHSSEEEEETTTEEETGGGGGTSSSTSTHHHHHHHHHHHH-HH
T ss_pred cccchhhccccccchhhhhheeecccccccccccccccccceEEeecccceeeeecccCcccccccccccceeeecc-cc
Confidence 46778889999999999999999999999999999999999999999999999999999999999999999999987 99
Q ss_pred HHHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhC
Q 022721 82 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 161 (293)
Q Consensus 82 ~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~ 161 (293)
+++++||++++ |++|+++||+|+++|++++.+.+
T Consensus 152 ~~l~l~g~~~~-a~eA~~~Glv~~v~~~~~l~~~a--------------------------------------------- 185 (245)
T PF00378_consen 152 RELLLTGEPIS-AEEALELGLVDEVVPDEELDEEA--------------------------------------------- 185 (245)
T ss_dssp HHHHHHTCEEE-HHHHHHTTSSSEEESGGGHHHHH---------------------------------------------
T ss_pred cccccccccch-hHHHHhhcceeEEcCchhhhHHH---------------------------------------------
Confidence 99999999999 99999999999999988876654
Q ss_pred CCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhh
Q 022721 162 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 241 (293)
Q Consensus 162 ~~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~ 241 (293)
.++++ +|+..+|.+++.+|+.+++.. ...+++.++.|.+.+..+
T Consensus 186 -----------------------~~~a~----~l~~~~~~a~~~~K~~~~~~~---------~~~~~~~~~~~~~~~~~~ 229 (245)
T PF00378_consen 186 -----------------------LELAK----RLAAKPPSALRATKKALNRAL---------EQSLEEALEFEQDLFAEC 229 (245)
T ss_dssp -----------------------HHHHH----HHHTSCHHHHHHHHHHHHHHH---------HSHHHHHHHHHHHHHHHH
T ss_pred -----------------------HHHHH----HHhcCCHHHHHHHHHHHHHHH---------HhhHHHHHHHHHHHHHHH
Confidence 24555 999999999999999999976 567999999999999999
Q ss_pred CCCCcHHHHHHHHhhCC
Q 022721 242 SLRSDFAEGVRAVLVDK 258 (293)
Q Consensus 242 ~~~~d~~egv~a~lv~k 258 (293)
+.++|++||+++|+ ||
T Consensus 230 ~~~~~~~e~~~~f~-eK 245 (245)
T PF00378_consen 230 FKSEDFQEGIAAFL-EK 245 (245)
T ss_dssp HTSHHHHHHHHHHH-TT
T ss_pred cCCHHHHHHHHHHh-Cc
Confidence 99999999999999 76
No 57
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
Probab=100.00 E-value=2.1e-33 Score=254.38 Aligned_cols=175 Identities=26% Similarity=0.394 Sum_probs=156.7
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHH
Q 022721 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 82 (293)
Q Consensus 3 ~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~ 82 (293)
.++...+.++.++.+++|||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++++|++|.. .++
T Consensus 82 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~eLal~~D~ria~~~a~f~~pe~~iGl~Pg~g~~~~l~r~~G~~-~a~ 160 (257)
T COG1024 82 NLMQPGQDLLRALADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGRG-RAK 160 (257)
T ss_pred HHHhHHHHHHHHHHhCCCCEEEEEcceEeechhhhhhcCCeEEecCCcEecCcccccccCCCCcHHHHHHHhcCHH-HHH
Confidence 3566677899999999999999999999999999999999999999999999999999999879999999999998 999
Q ss_pred HHhhcCCCCCCHHHHHHcCccceeccC-CChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhC
Q 022721 83 YLGMTGKRISTPSDALFAGLGTDYVPS-GNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 161 (293)
Q Consensus 83 ~l~ltG~~l~~a~eA~~~Gl~~~~v~~-~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~ 161 (293)
+|++||+.++ ++||.++||++++|+. +++.+.+
T Consensus 161 ~l~ltg~~~~-a~eA~~~Glv~~vv~~~~~l~~~a--------------------------------------------- 194 (257)
T COG1024 161 ELLLTGEPIS-AAEALELGLVDEVVPDAEELLERA--------------------------------------------- 194 (257)
T ss_pred HHHHcCCcCC-HHHHHHcCCcCeeeCCHHHHHHHH---------------------------------------------
Confidence 9999999999 9999999999999985 4555543
Q ss_pred CCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhh
Q 022721 162 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 241 (293)
Q Consensus 162 ~~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~ 241 (293)
.++++ +++. +|.+++.+|+.++... ..++++.+..|...+...
T Consensus 195 -----------------------~~~a~----~~a~-~~~a~~~~k~~~~~~~---------~~~l~~~~~~~~~~~~~~ 237 (257)
T COG1024 195 -----------------------LELAR----RLAA-PPLALAATKRLVRAAL---------EADLAEALEAEALAFARL 237 (257)
T ss_pred -----------------------HHHHH----HHcc-CHHHHHHHHHHHHHhh---------hccHHHHHHHHHHHHHHH
Confidence 24555 5555 9999999999999887 445999999999998888
Q ss_pred CCCCcHHHHHHHHhhCCCCCCCC
Q 022721 242 SLRSDFAEGVRAVLVDKDQNPKW 264 (293)
Q Consensus 242 ~~~~d~~egv~a~lv~k~r~P~w 264 (293)
+.++|+.||+++|+ + |+|.|
T Consensus 238 ~~~~d~~eg~~a~~-~--r~p~~ 257 (257)
T COG1024 238 FSSEDFREGVRAFL-E--RKPVF 257 (257)
T ss_pred hcChhHHHHHHHHH-c--cCCCC
Confidence 88999999999999 5 68887
No 58
>PRK07827 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2e-33 Score=254.99 Aligned_cols=174 Identities=21% Similarity=0.283 Sum_probs=156.1
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 83 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~ 83 (293)
|++...+++.+|..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++++++++ . .+++
T Consensus 86 ~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~l~~-~-~a~~ 163 (260)
T PRK07827 86 RAREMTALLRAIVELPKPVIAAIDGHVRAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLSP-R-AAAR 163 (260)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCeeecchhhHHHhCCEEEEcCCCEEeCcccccCCCCCcccchhHHhhhH-H-HHHH
Confidence 5566677889999999999999999999999999999999999999999999999999999999999999864 4 8999
Q ss_pred HhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCC
Q 022721 84 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 163 (293)
Q Consensus 84 l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~ 163 (293)
|++||+.++ |++|+++||||++++ ++++..
T Consensus 164 l~l~g~~~~-a~eA~~~Glv~~v~~--~l~~~a----------------------------------------------- 193 (260)
T PRK07827 164 YYLTGEKFG-AAEAARIGLVTAAAD--DVDAAV----------------------------------------------- 193 (260)
T ss_pred HHHhCCccC-HHHHHHcCCcccchH--HHHHHH-----------------------------------------------
Confidence 999999999 999999999999864 243322
Q ss_pred CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCC
Q 022721 164 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 243 (293)
Q Consensus 164 ~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~ 243 (293)
.++++ +|++.+|.+++.+|+++++.. ..++.+.++.|...+..++.
T Consensus 194 ---------------------~~~a~----~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~~~~~~~~~~~ 239 (260)
T PRK07827 194 ---------------------AALLA----DLRRGSPQGLAESKALTTAAV---------LAGFDRDAEELTEESARLFV 239 (260)
T ss_pred ---------------------HHHHH----HHHhCCHHHHHHHHHHHHhhh---------cCCHHHHHHHHHHHHHHHhc
Confidence 34565 899999999999999999876 56789999999999999999
Q ss_pred CCcHHHHHHHHhhCCCCCCCCC
Q 022721 244 RSDFAEGVRAVLVDKDQNPKWN 265 (293)
Q Consensus 244 ~~d~~egv~a~lv~k~r~P~w~ 265 (293)
++|+++|+++|+ +| |+|+|.
T Consensus 240 ~~~~~~~~~af~-~k-r~p~~~ 259 (260)
T PRK07827 240 SDEAREGMTAFL-QK-RPPRWA 259 (260)
T ss_pred ChhHHHHHHHHh-cC-CCCCCC
Confidence 999999999999 88 789995
No 59
>PLN02888 enoyl-CoA hydratase
Probab=100.00 E-value=3.1e-33 Score=254.54 Aligned_cols=173 Identities=14% Similarity=0.143 Sum_probs=154.3
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcC
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTG 88 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG 88 (293)
..++..|..+|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. .+++|++||
T Consensus 89 ~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l~ltg 167 (265)
T PLN02888 89 TDPVAQMERCRKPIIGAINGFAITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGAN-RAREVSLTA 167 (265)
T ss_pred HHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEecCCCEecCccccccCCCCccHhhHHHHHhCHH-HHHHHHHhC
Confidence 3466788999999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred CCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHH
Q 022721 89 KRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQ 168 (293)
Q Consensus 89 ~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~ 168 (293)
++++ |+||+++||||++||++++.+.+
T Consensus 168 ~~~~-a~eA~~~Glv~~vv~~~~l~~~a---------------------------------------------------- 194 (265)
T PLN02888 168 MPLT-AETAERWGLVNHVVEESELLKKA---------------------------------------------------- 194 (265)
T ss_pred CccC-HHHHHHcCCccEeeChHHHHHHH----------------------------------------------------
Confidence 9999 99999999999999977655532
Q ss_pred HHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhC--CCCc
Q 022721 169 IIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS--LRSD 246 (293)
Q Consensus 169 i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~--~~~d 246 (293)
.++|+ +|++.+|.+++.+|++++... ..++++++..|...+..++ .++|
T Consensus 195 ----------------~~~a~----~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~~~~d 245 (265)
T PLN02888 195 ----------------REVAE----AIIKNNQGMVLRYKSVINDGL---------KLDLGHALQLEKERAHDYYNGMTKE 245 (265)
T ss_pred ----------------HHHHH----HHHhCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHHHhccCCHH
Confidence 34666 999999999999999999876 5678999999988777664 5999
Q ss_pred HHHHHHHHhhCCCCCCCCCC
Q 022721 247 FAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 247 ~~egv~a~lv~k~r~P~w~~ 266 (293)
+.||+++|+ +| |+|+-.+
T Consensus 246 ~~e~~~af~-ek-r~~~~~~ 263 (265)
T PLN02888 246 QFQKMQEFI-AG-RSSKKPS 263 (265)
T ss_pred HHHHHHHHH-hc-CCCCCCC
Confidence 999999999 88 7776444
No 60
>PLN02921 naphthoate synthase
Probab=100.00 E-value=2.5e-33 Score=261.70 Aligned_cols=172 Identities=19% Similarity=0.217 Sum_probs=151.4
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcC
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTG 88 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG 88 (293)
..++..|..++|||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. .+++|++||
T Consensus 151 ~~l~~~l~~~~kPvIAaVnG~a~GGG~~LalacD~riA~~~A~f~~pe~~~Gl~p~~gg~~~L~rliG~~-~A~ellltG 229 (327)
T PLN02921 151 LDLQIQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMARLVGQK-KAREMWFLA 229 (327)
T ss_pred HHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCHH-HHHHHHHcC
Confidence 3467789999999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred CCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHH
Q 022721 89 KRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQ 168 (293)
Q Consensus 89 ~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~ 168 (293)
+.++ |+||+++||||++||.+++.+.+
T Consensus 230 ~~~~-A~eA~~~GLV~~vv~~~~l~~~a---------------------------------------------------- 256 (327)
T PLN02921 230 RFYT-ASEALKMGLVNTVVPLDELEGET---------------------------------------------------- 256 (327)
T ss_pred CcCC-HHHHHHCCCceEEeCHHHHHHHH----------------------------------------------------
Confidence 9999 99999999999999987666643
Q ss_pred HHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcHH
Q 022721 169 IIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFA 248 (293)
Q Consensus 169 i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~~ 248 (293)
.+||+ +|+++||.+++.+|++++... . ........+...+..++.++|+.
T Consensus 257 ----------------~~~a~----~la~~~p~al~~~K~~l~~~~---------~-~~~~~~~~~~~~~~~~~~s~d~~ 306 (327)
T PLN02921 257 ----------------VKWCR----EILRNSPTAIRVLKSALNAAD---------D-GHAGLQELGGNATLLFYGSEEGN 306 (327)
T ss_pred ----------------HHHHH----HHHccCHHHHHHHHHHHHHhh---------c-chhHHHHHHHHHHHHHhcCHHHH
Confidence 35776 999999999999999998765 2 23333333446677778999999
Q ss_pred HHHHHHhhCCCCCCCCCC
Q 022721 249 EGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 249 egv~a~lv~k~r~P~w~~ 266 (293)
||+++|+ +| |+|.|.+
T Consensus 307 egi~Af~-ek-r~p~f~~ 322 (327)
T PLN02921 307 EGRTAYL-EG-RAPDFSK 322 (327)
T ss_pred HHHHHHh-cc-CCCCCCC
Confidence 9999999 89 8999975
No 61
>PRK08321 naphthoate synthase; Validated
Probab=100.00 E-value=3.3e-33 Score=258.80 Aligned_cols=172 Identities=19% Similarity=0.229 Sum_probs=152.6
Q ss_pred HHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEe-CCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcC
Q 022721 10 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVT-EKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTG 88 (293)
Q Consensus 10 ~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riat-e~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG 88 (293)
.+...+..+|||+||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|++++|+|++|.. .+++|++||
T Consensus 126 ~~~~~l~~~pkP~IAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~~~~~L~r~vG~~-~A~~l~ltG 204 (302)
T PRK08321 126 EVQRLIRFMPKVVIAVVPGWAAGGGHSLHVVCDLTLASREHARFKQTDADVGSFDGGYGSAYLARQVGQK-FAREIFFLG 204 (302)
T ss_pred HHHHHHHcCCCCEEEEEcCeeehHHHHHHHhCCEEEEecCCCEEECCccccccCCCchHHHHHHHHhCHH-HHHHHHHcC
Confidence 46667899999999999999999999999999999999 6999999999999999999999999999998 999999999
Q ss_pred CCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHH
Q 022721 89 KRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQ 168 (293)
Q Consensus 89 ~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~ 168 (293)
+.++ |+||+++||||++||++++.+.+
T Consensus 205 ~~~~-A~eA~~~GLv~~vv~~~~l~~~a---------------------------------------------------- 231 (302)
T PRK08321 205 RTYS-AEEAHDMGAVNAVVPHAELETEA---------------------------------------------------- 231 (302)
T ss_pred CccC-HHHHHHCCCceEeeCHHHHHHHH----------------------------------------------------
Confidence 9999 99999999999999987766643
Q ss_pred HHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcHH
Q 022721 169 IIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFA 248 (293)
Q Consensus 169 i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~~ 248 (293)
.++++ +|++.+|.+++.+|++++... . .+.+....|...+..++.++|+.
T Consensus 232 ----------------~~~a~----~la~~~~~a~~~~K~~l~~~~---------~-~~~~~~~~e~~~~~~~~~~~d~~ 281 (302)
T PRK08321 232 ----------------LEWAR----EINGKSPTAMRMLKYAFNLTD---------D-GLVGQQLFAGEATRLAYMTDEAQ 281 (302)
T ss_pred ----------------HHHHH----HHHhCCHHHHHHHHHHHHhhh---------c-ccHHHHHHHHHHHHHHhcCHHHH
Confidence 34666 899999999999999998765 3 23444556777888889999999
Q ss_pred HHHHHHhhCCCCCCCCCCC
Q 022721 249 EGVRAVLVDKDQNPKWNPA 267 (293)
Q Consensus 249 egv~a~lv~k~r~P~w~~~ 267 (293)
||+++|+ +| |+|.|...
T Consensus 282 egi~af~-ek-r~p~~~~~ 298 (302)
T PRK08321 282 EGRDAFL-EK-RDPDWSDF 298 (302)
T ss_pred HHHHHHh-cc-CCCCCCCC
Confidence 9999999 88 89999763
No 62
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=4.2e-33 Score=252.32 Aligned_cols=172 Identities=13% Similarity=0.160 Sum_probs=152.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHh
Q 022721 6 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 85 (293)
Q Consensus 6 ~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ 85 (293)
+..+.++.+|..+|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+ .+|++++|.. .+++|+
T Consensus 83 ~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~~~-~~l~~~vg~~-~a~~l~ 160 (255)
T PRK07112 83 EPLYDLWHRLATGPYVTIAHVRGKVNAGGIGFVAASDIVIADETAPFSLSELLFGLIPACVL-PFLIRRIGTQ-KAHYMT 160 (255)
T ss_pred HHHHHHHHHHHcCCCCEEEEEecEEEcchhHHHHcCCEEEEcCCCEEeCchhhhccCcchhh-HHHHHHhCHH-HHHHHH
Confidence 33467888899999999999999999999999999999999999999999999999998765 5789999998 999999
Q ss_pred hcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCC
Q 022721 86 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKS 165 (293)
Q Consensus 86 ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t 165 (293)
+||+.++ |+||+++||+|++||+++. ..
T Consensus 161 l~g~~~~-a~eA~~~Glv~~vv~~~~~--~~------------------------------------------------- 188 (255)
T PRK07112 161 LMTQPVT-AQQAFSWGLVDAYGANSDT--LL------------------------------------------------- 188 (255)
T ss_pred HhCCccc-HHHHHHcCCCceecCcHHH--HH-------------------------------------------------
Confidence 9999999 9999999999999986431 11
Q ss_pred HHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCC
Q 022721 166 VRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRS 245 (293)
Q Consensus 166 ~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~ 245 (293)
.++++ +|.+.+|.+++.+|++++... ..+.+.++.|......++.++
T Consensus 189 -------------------~~~a~----~l~~~~p~a~~~~K~~~~~~~----------~~~~~~~~~e~~~~~~~~~~~ 235 (255)
T PRK07112 189 -------------------RKHLL----RLRCLNKAAVARYKSYASTLD----------DTVAAARPAALAANIEMFADP 235 (255)
T ss_pred -------------------HHHHH----HHHhCCHHHHHHHHHHHHHhh----------hhHHHHHHHHHHHHHHHHcCh
Confidence 24555 999999999999999998643 358899999999888899999
Q ss_pred cHHHHHHHHhhCCCCCCCCCC
Q 022721 246 DFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 246 d~~egv~a~lv~k~r~P~w~~ 266 (293)
|+.||+++|+ +| |+|.|..
T Consensus 236 ~~~eg~~af~-~k-r~p~~~~ 254 (255)
T PRK07112 236 ENLRKIARYV-ET-GKFPWEA 254 (255)
T ss_pred HHHHHHHHHH-cC-CCCCCCC
Confidence 9999999999 88 8999975
No 63
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional
Probab=100.00 E-value=3.2e-33 Score=256.06 Aligned_cols=167 Identities=14% Similarity=0.179 Sum_probs=152.1
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCC-CCCchHHHHHhcCCCcHHHHHHHhh
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGL-FPDVGFSYIAAKGPGGGSVGAYLGM 86 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl-~p~~g~~~~l~r~~G~~~~a~~l~l 86 (293)
...++.+|..+||||||+|||+|+|||++|+++|||||++++++|++||+++|+ +|++|+++++++++|.. .+++|++
T Consensus 96 ~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~p~~~~~~~l~~~~G~~-~a~~lll 174 (278)
T PLN03214 96 QTTFLVRLLRSRLATVCAIRGACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFMGRVIDRK-VAESLLL 174 (278)
T ss_pred HHHHHHHHHcCCCCEEEEEcCcccchHHHHHHhCCEEEecCCCEecCcHHHhCCCCCChhHHHHHHHhcCHH-HHHHHHH
Confidence 345778899999999999999999999999999999999999999999999999 59999999999999998 9999999
Q ss_pred cCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCH
Q 022721 87 TGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSV 166 (293)
Q Consensus 87 tG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~ 166 (293)
||+.++ |+||+++||+|++||.+++.+.+
T Consensus 175 tg~~~~-a~eA~~~Glv~~vv~~~~l~~~a-------------------------------------------------- 203 (278)
T PLN03214 175 RGRLVR-PAEAKQLGLIDEVVPAAALMEAA-------------------------------------------------- 203 (278)
T ss_pred cCCccC-HHHHHHcCCCcEecChHHHHHHH--------------------------------------------------
Confidence 999999 99999999999999977655532
Q ss_pred HHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCc
Q 022721 167 RQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSD 246 (293)
Q Consensus 167 ~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d 246 (293)
.+++. +|.+.+|.+++.+|+++++.. ..++++.++.|.+.+..++.++|
T Consensus 204 ------------------~~~a~----~l~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~~s~d 252 (278)
T PLN03214 204 ------------------ASAME----RALKLPSAARAATKALLREEF---------SAAWEAYYEEEAKGGWKMLSEPS 252 (278)
T ss_pred ------------------HHHHH----HHHcCCHHHHHHHHHHHHhhH---------HHHHHHHHHHHHHHHHHHhCCHH
Confidence 34666 899999999999999999876 55789999999988888899999
Q ss_pred HHHHHHHHhhCC
Q 022721 247 FAEGVRAVLVDK 258 (293)
Q Consensus 247 ~~egv~a~lv~k 258 (293)
++||+++|+ +|
T Consensus 253 ~~egi~afl-ek 263 (278)
T PLN03214 253 IIKALGGVM-ER 263 (278)
T ss_pred HHHHHHHHH-HH
Confidence 999999998 65
No 64
>PRK06023 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.7e-33 Score=251.39 Aligned_cols=169 Identities=18% Similarity=0.217 Sum_probs=152.1
Q ss_pred HHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHH
Q 022721 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 84 (293)
Q Consensus 5 ~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l 84 (293)
.....+++..|..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|+++++++++|.. .++++
T Consensus 83 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~la~acD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~-~a~~l 161 (251)
T PRK06023 83 GSEILDFLIALAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGHQ-RAFAL 161 (251)
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCceecHHHHHHHhCCEEEEeCCCEecCcccccCCCCCchHHHHHHHHHhHH-HHHHH
Confidence 34455678899999999999999999999999999999999999999999999999999999999999999987 99999
Q ss_pred hhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCC
Q 022721 85 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEK 164 (293)
Q Consensus 85 ~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~ 164 (293)
++||+.++ |++|+++||+|++||.+++.+.+
T Consensus 162 ~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a------------------------------------------------ 192 (251)
T PRK06023 162 LALGEGFS-AEAAQEAGLIWKIVDEEAVEAET------------------------------------------------ 192 (251)
T ss_pred HHhCCCCC-HHHHHHcCCcceeeCHHHHHHHH------------------------------------------------
Confidence 99999999 99999999999999977666543
Q ss_pred CHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCC
Q 022721 165 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLR 244 (293)
Q Consensus 165 t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~ 244 (293)
.++++ +|.+.||.+++.+|++++... . .+.+.++.|...+..++.+
T Consensus 193 --------------------~~~a~----~l~~~~~~a~~~~K~~l~~~~---------~-~l~~~~~~e~~~~~~~~~~ 238 (251)
T PRK06023 193 --------------------LKAAE----ELAAKPPQALQIARDLMRGPR---------E-DILARIDEEAKHFAARLKS 238 (251)
T ss_pred --------------------HHHHH----HHHhCCHHHHHHHHHHHHhch---------h-hHHHHHHHHHHHHHHHhCC
Confidence 34666 899999999999999998644 3 5888898888888889999
Q ss_pred CcHHHHHHHHhhCC
Q 022721 245 SDFAEGVRAVLVDK 258 (293)
Q Consensus 245 ~d~~egv~a~lv~k 258 (293)
+|++||+++|+ +|
T Consensus 239 ~~~~e~~~af~-e~ 251 (251)
T PRK06023 239 AEARAAFEAFM-RR 251 (251)
T ss_pred HHHHHHHHHHh-cC
Confidence 99999999998 54
No 65
>PRK05870 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.9e-33 Score=251.64 Aligned_cols=167 Identities=18% Similarity=0.227 Sum_probs=152.1
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 83 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~ 83 (293)
+++..+.++..+..+|||+||++||+|+|||++|+++|||||++++++|++||+++|++|++|+++++++++|.. .+++
T Consensus 80 ~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~-~a~~ 158 (249)
T PRK05870 80 GLRRIYDGFLAVASCPLPTIAAVNGAAVGAGLNLALAADVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVGPQ-VARA 158 (249)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCEeEchhHHHHHhCCEEEEcCCCEEeCcccccCcCCCCcceeeHHhhhCHH-HHHH
Confidence 455566778889999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCC
Q 022721 84 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 163 (293)
Q Consensus 84 l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~ 163 (293)
|++||++++ |+||+++||+|++| +++.+.+
T Consensus 159 l~ltg~~~~-a~eA~~~Glv~~vv--~~l~~~a----------------------------------------------- 188 (249)
T PRK05870 159 ALLFGMRFD-AEAAVRHGLALMVA--DDPVAAA----------------------------------------------- 188 (249)
T ss_pred HHHhCCccC-HHHHHHcCCHHHHH--hhHHHHH-----------------------------------------------
Confidence 999999999 99999999999999 4444422
Q ss_pred CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCcccc-CCHHHHHHHHHHHHHhhC
Q 022721 164 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNEL-SKLSGVMKYEYRVALRSS 242 (293)
Q Consensus 164 ~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~-~~~~e~l~~e~~~~~~~~ 242 (293)
.++|+ +|++.+|.+++.+|+++++.. . .+++++++.|...+..++
T Consensus 189 ---------------------~~~a~----~la~~~~~a~~~~K~~~~~~~---------~~~~l~~~~~~e~~~~~~~~ 234 (249)
T PRK05870 189 ---------------------LELAA----GPAAAPRELVLATKASMRATA---------SLAQHAAAVEFELGPQAASV 234 (249)
T ss_pred ---------------------HHHHH----HHHhCCHHHHHHHHHHHHhcc---------ccCCHHHHHHHHHHHHHHHh
Confidence 34666 999999999999999999876 5 679999999999999999
Q ss_pred CCCcHHHHHHHHh
Q 022721 243 LRSDFAEGVRAVL 255 (293)
Q Consensus 243 ~~~d~~egv~a~l 255 (293)
.++|++||+++|+
T Consensus 235 ~~~d~~eg~~af~ 247 (249)
T PRK05870 235 QSPEFAARLAAAQ 247 (249)
T ss_pred cChhHHHHHHHHh
Confidence 9999999999998
No 66
>PRK08259 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.4e-33 Score=251.47 Aligned_cols=163 Identities=16% Similarity=0.124 Sum_probs=147.2
Q ss_pred HHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcCCCCCCH
Q 022721 15 ISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTP 94 (293)
Q Consensus 15 i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG~~l~~a 94 (293)
+..+|||+||+|||+|+|||++|+++||||||+++++|++||+++|+.|.+|++++|++++|.. .+++|++||+.++ |
T Consensus 89 ~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~-~a~~lll~g~~~~-a 166 (254)
T PRK08259 89 RMRLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHS-RAMDLILTGRPVD-A 166 (254)
T ss_pred HhcCCCCEEEEECCEEEhHHHHHHHhCCEEEecCCCEecCcccccCCCCCccHHHHHHHHhCHH-HHHHHHHcCCccC-H
Confidence 4579999999999999999999999999999999999999999999999999999999999998 9999999999999 9
Q ss_pred HHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHHHHHHHH
Q 022721 95 SDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELK 174 (293)
Q Consensus 95 ~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~i~~~l~ 174 (293)
+||+++||||++||.+++.+.+
T Consensus 167 ~eA~~~Glv~~vv~~~~l~~~a---------------------------------------------------------- 188 (254)
T PRK08259 167 DEALAIGLANRVVPKGQARAAA---------------------------------------------------------- 188 (254)
T ss_pred HHHHHcCCCCEeeChhHHHHHH----------------------------------------------------------
Confidence 9999999999999988766643
Q ss_pred hcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcHHHHHHHH
Q 022721 175 KHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAV 254 (293)
Q Consensus 175 ~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~~egv~a~ 254 (293)
.+||+ +|++.||.+++.+|+++++.. ..++++.+..|...+...+. +|+.||+++|
T Consensus 189 ----------~~~a~----~la~~~~~a~~~~K~~~~~~~---------~~~~~~~~~~e~~~~~~~~~-~d~~egi~af 244 (254)
T PRK08259 189 ----------EELAA----ELAAFPQTCLRADRLSALEQW---------GLPEEAALANEFAHGLAVLA-AEALEGAARF 244 (254)
T ss_pred ----------HHHHH----HHHhCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHHHHh-hHHHHHHHHH
Confidence 34666 899999999999999999876 56799999999887777666 9999999999
Q ss_pred hhCCCCCC
Q 022721 255 LVDKDQNP 262 (293)
Q Consensus 255 lv~k~r~P 262 (293)
+ +|.++|
T Consensus 245 ~-~~~~~~ 251 (254)
T PRK08259 245 A-AGAGRH 251 (254)
T ss_pred H-hhhccc
Confidence 9 553555
No 67
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.5e-32 Score=253.94 Aligned_cols=170 Identities=16% Similarity=0.127 Sum_probs=150.0
Q ss_pred HHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCC-CCCCCchHHHHHhcCCCcHHHHHHHhhcCC
Q 022721 11 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGI-GLFPDVGFSYIAAKGPGGGSVGAYLGMTGK 89 (293)
Q Consensus 11 l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~l-Gl~p~~g~~~~l~r~~G~~~~a~~l~ltG~ 89 (293)
++..|..++||+||+|||+|+|||++|+++||+|||+++++|++||+++ |+++ ++++ + +.+|.. .+++|++||+
T Consensus 104 ~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~A~f~~pe~~l~G~~~--~~~~-~-~~vG~~-~A~~llltg~ 178 (298)
T PRK12478 104 KFMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASDDAVIGTPYSRMWGAYL--TGMW-L-YRLSLA-KVKWHSLTGR 178 (298)
T ss_pred HHHHHHhCCCCEEEEEccEEehhHHHHHHHCCEEEEcCCcEEeccccccccCCc--hhHH-H-HHhhHH-HHHHHHHcCC
Confidence 5667899999999999999999999999999999999999999999997 8875 3343 2 458987 9999999999
Q ss_pred CCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHHH
Q 022721 90 RISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQI 169 (293)
Q Consensus 90 ~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~i 169 (293)
+++ |+||+++||||++||++++++.+
T Consensus 179 ~i~-A~eA~~~GLV~~vv~~~~l~~~a----------------------------------------------------- 204 (298)
T PRK12478 179 PLT-GVQAAEAELINEAVPFERLEARV----------------------------------------------------- 204 (298)
T ss_pred ccC-HHHHHHcCCcceecCHHHHHHHH-----------------------------------------------------
Confidence 999 99999999999999988777654
Q ss_pred HHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcHH-
Q 022721 170 IEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFA- 248 (293)
Q Consensus 170 ~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~~- 248 (293)
.+||. +|+.+||.+++.+|++++... ...++.+++..|...+..++.++|+.
T Consensus 205 ---------------~~~a~----~la~~~p~a~~~~K~~l~~~~--------~~~~l~~~~~~e~~~~~~~~~s~d~~e 257 (298)
T PRK12478 205 ---------------AEVAT----ELARIPLSQLQAQKLIVNQAY--------ENMGLASTQTLGGILDGLMRNTPDALE 257 (298)
T ss_pred ---------------HHHHH----HHHhCCHHHHHHHHHHHHHHH--------HhcchhHHHHHHHHHHHHHhcChhHHH
Confidence 35777 899999999999999999876 12458999999999999999999997
Q ss_pred -------HHHHHHhhCCCCCCCCCCCC
Q 022721 249 -------EGVRAVLVDKDQNPKWNPAS 268 (293)
Q Consensus 249 -------egv~a~lv~k~r~P~w~~~~ 268 (293)
||+++|+ +| |+|+|++-+
T Consensus 258 ~~~~~~~egv~Af~-ek-R~p~f~~~~ 282 (298)
T PRK12478 258 FIRTAETQGVRAAV-ER-RDGPFGDYS 282 (298)
T ss_pred HHHHHHHHHHHHHH-Hh-cCCcccccC
Confidence 5999999 89 899998654
No 68
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=4.4e-32 Score=267.17 Aligned_cols=174 Identities=10% Similarity=0.011 Sum_probs=159.8
Q ss_pred HHHHHHHHhCCCcEEEEE-CCccchhH-HHHhhhcCeEEE-------eCCeEEeCcccCCCCCCCchHHHHHhcCC-CcH
Q 022721 9 YSLICKISEYKKPYISLM-DGVTMGFG-IGISGHGRYRIV-------TEKTLLAMPENGIGLFPDVGFSYIAAKGP-GGG 78 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~v-nG~a~GgG-~~lal~~D~ria-------te~a~f~~pe~~lGl~p~~g~~~~l~r~~-G~~ 78 (293)
..++.+|..++||+||+| ||+|+||| ++|+++||+||| +++++|++||+++|++|++|++++|++++ |..
T Consensus 355 ~~~~~~l~~~~kpviAav~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~~e~~lGl~p~~gg~~~L~~~v~G~~ 434 (546)
T TIGR03222 355 RRTLARLDVSSRSLFALIEPGSCFAGTLAELAFAADRSYMLAFPDNNDPEPAITLSELNFGLYPMVNGLSRLATRFYAEP 434 (546)
T ss_pred HHHHHHHHcCCCCEEEEECCCeEeHHHHHHHHHhCceeeecCCCCCCCCCCEEeCCccccccCCCcCcHHHHHHHhcCch
Confidence 457788999999999999 89999999 999999999999 89999999999999999999999999998 876
Q ss_pred HHH--HHHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHH
Q 022721 79 SVG--AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQI 156 (293)
Q Consensus 79 ~~a--~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i 156 (293)
++ +++++||++++ |+||+++|||++++|++++.+.+
T Consensus 435 -~a~~~~~~ltg~~i~-A~eA~~~Glv~~vv~~~~l~~~a---------------------------------------- 472 (546)
T TIGR03222 435 -APVAAVRDKIGQALD-AEEAERLGLVTAAPDDIDWEDEI---------------------------------------- 472 (546)
T ss_pred -hHHHHHHHHhCCCCC-HHHHHHcCCcccccCchHHHHHH----------------------------------------
Confidence 88 55999999999 99999999999999988776643
Q ss_pred HhhhCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHH-HHHHH
Q 022721 157 TSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGV-MKYEY 235 (293)
Q Consensus 157 ~~~f~~~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~-l~~e~ 235 (293)
.+||+ +|+++||.+++.+|++++... ..++++. +..|.
T Consensus 473 ----------------------------~~~a~----~la~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~~e~ 511 (546)
T TIGR03222 473 ----------------------------RIALE----ERASFSPDALTGLEANLRFAG---------PETMETRIFGRLT 511 (546)
T ss_pred ----------------------------HHHHH----HHHhcCHHHHHHHHHHHhhcC---------CcChhhhHHHHHH
Confidence 35676 999999999999999998876 6789999 99999
Q ss_pred HHHHhhCCCCcHHH---HHHHHhhCCCCCCCCCCC
Q 022721 236 RVALRSSLRSDFAE---GVRAVLVDKDQNPKWNPA 267 (293)
Q Consensus 236 ~~~~~~~~~~d~~e---gv~a~lv~k~r~P~w~~~ 267 (293)
..+..++.++|..| |+++|+ +| |+|+|+-.
T Consensus 512 ~~~~~~~~~~d~~e~~~g~~af~-ek-r~p~f~~~ 544 (546)
T TIGR03222 512 AWQNWIFNRPNAVGENGALKVYG-SG-KKAQFDME 544 (546)
T ss_pred HHHHHHhcCCcccchhhHHHHHc-cC-CCCCCCcc
Confidence 99999999999999 999999 99 89999854
No 69
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=99.98 E-value=4.7e-32 Score=267.63 Aligned_cols=175 Identities=10% Similarity=-0.004 Sum_probs=160.4
Q ss_pred HHHHHHHHHhCCCcEEEEEC-CccchhH-HHHhhhcCeEEEe-------CCeEEeCcccCCCCCCCchHHHHHhcC-CCc
Q 022721 8 EYSLICKISEYKKPYISLMD-GVTMGFG-IGISGHGRYRIVT-------EKTLLAMPENGIGLFPDVGFSYIAAKG-PGG 77 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vn-G~a~GgG-~~lal~~D~riat-------e~a~f~~pe~~lGl~p~~g~~~~l~r~-~G~ 77 (293)
...++.+|..+||||||+|| |+|+||| ++|+++||+|||+ ++++|++||+++|++|++|++++|+|+ +|.
T Consensus 358 ~~~~~~~l~~~~kPvIAaV~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~pe~~~Gl~p~~gg~~~L~r~~vG~ 437 (550)
T PRK08184 358 LRRTLKRLDVTSRSLFALIEPGSCFAGTLAELALAADRSYMLALPDDNDPAPAITLSALNFGLYPMVNGLSRLARRFYGE 437 (550)
T ss_pred HHHHHHHHHhCCCCEEEEECCCceehhHHHHHHHHCChhhhcCCCCCCCCCCEEECccccccCCCCCCcHHHhHHHhcCh
Confidence 34577889999999999997 9999999 9999999999999 999999999999999999999999987 698
Q ss_pred HHHHHHH--hhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhH
Q 022721 78 GSVGAYL--GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQ 155 (293)
Q Consensus 78 ~~~a~~l--~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ 155 (293)
. .++++ ++||++++ |++|+++||||++||++++.+.+
T Consensus 438 ~-~A~~~~l~~tg~~i~-A~eA~~~GLv~~vv~~~~l~~~a--------------------------------------- 476 (550)
T PRK08184 438 P-DPLAAVRAKIGQPLD-ADAAEELGLVTAAPDDIDWEDEV--------------------------------------- 476 (550)
T ss_pred H-HHHHHHHHHhCCcCC-HHHHHHcCCcccccChHHHHHHH---------------------------------------
Confidence 7 99997 58999999 99999999999999988776643
Q ss_pred HHhhhCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHH-HHHH
Q 022721 156 ITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGV-MKYE 234 (293)
Q Consensus 156 i~~~f~~~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~-l~~e 234 (293)
.++|+ +|+++||.+++.+|++++... ..++++. +..|
T Consensus 477 -----------------------------~~~a~----~ia~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~~e 514 (550)
T PRK08184 477 -----------------------------RIALE----ERASLSPDALTGMEANLRFAG---------PETMETRIFGRL 514 (550)
T ss_pred -----------------------------HHHHH----HHHhCCHHHHHHHHHHHHhcC---------CCCHHHHHHHHH
Confidence 34666 999999999999999999887 6789999 9999
Q ss_pred HHHHHhhCCCCcHHH---HHHHHhhCCCCCCCCCCC
Q 022721 235 YRVALRSSLRSDFAE---GVRAVLVDKDQNPKWNPA 267 (293)
Q Consensus 235 ~~~~~~~~~~~d~~e---gv~a~lv~k~r~P~w~~~ 267 (293)
...+..+++++|..| |+++|+ +| |+|+|...
T Consensus 515 ~~~~~~~~~~~d~~e~~~g~~af~-ek-r~~~f~~~ 548 (550)
T PRK08184 515 TAWQNWIFQRPNAVGEKGALKVYG-TG-QKAQFDWN 548 (550)
T ss_pred HHHHHHHhcCCcccccchHHHHhc-cC-CCCCCCCC
Confidence 999999999999999 999999 99 89999864
No 70
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=99.98 E-value=2.5e-31 Score=239.96 Aligned_cols=164 Identities=14% Similarity=0.180 Sum_probs=151.3
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcC
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTG 88 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG 88 (293)
..++..+..+|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. .+++|++||
T Consensus 84 ~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~-~a~~llltg 162 (249)
T PRK07110 84 ANLYSLALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGMGATAILPEKLGLA-LGQEMLLTA 162 (249)
T ss_pred HHHHHHHHcCCCCEEEEecCceechHHHHHHhCCEEEEeCCCEecCchhccCCCCCchHHHHHHHHhCHH-HHHHHHHcC
Confidence 4678889999999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred CCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHH
Q 022721 89 KRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQ 168 (293)
Q Consensus 89 ~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~ 168 (293)
++++ |++|+++||+|++++++++.+.+
T Consensus 163 ~~~~-a~eA~~~Glv~~vv~~~~l~~~a---------------------------------------------------- 189 (249)
T PRK07110 163 RYYR-GAELKKRGVPFPVLPRAEVLEKA---------------------------------------------------- 189 (249)
T ss_pred CccC-HHHHHHcCCCeEEeChHHHHHHH----------------------------------------------------
Confidence 9999 99999999999999977665533
Q ss_pred HHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcHH
Q 022721 169 IIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFA 248 (293)
Q Consensus 169 i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~~ 248 (293)
.++|+ +|++.||.+++.+|+.+++.. ..++.+.++.|...+..++.++|++
T Consensus 190 ----------------~~~a~----~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~~~~~~~ 240 (249)
T PRK07110 190 ----------------LELAR----SLAEKPRHSLVLLKDHLVADR---------RRRLPEVIEQEVAMHEKTFHQPEVK 240 (249)
T ss_pred ----------------HHHHH----HHHhCCHHHHHHHHHHHHHhh---------hccHHHHHHHHHHHHHHHhCCHhHH
Confidence 34565 899999999999999999877 6689999999999999999999999
Q ss_pred HHHHHHh
Q 022721 249 EGVRAVL 255 (293)
Q Consensus 249 egv~a~l 255 (293)
||+++..
T Consensus 241 egi~~~~ 247 (249)
T PRK07110 241 RRIESLY 247 (249)
T ss_pred HHHHHhc
Confidence 9998864
No 71
>PRK06190 enoyl-CoA hydratase; Provisional
Probab=99.97 E-value=3.8e-30 Score=233.33 Aligned_cols=154 Identities=20% Similarity=0.250 Sum_probs=141.0
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhc
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMT 87 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~lt 87 (293)
...++..|..+|||+||++||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. .+++|++|
T Consensus 83 ~~~~~~~i~~~~kPvIAaV~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~-~a~~l~lt 161 (258)
T PRK06190 83 LPNPSPAWPAMRKPVIGAINGAAVTGGLELALACDILIASERARFADTHARVGILPGWGLSVRLPQKVGIG-RARRMSLT 161 (258)
T ss_pred HHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEeCCCEEECcccccCcCCCccHHHHHHHHhCHH-HHHHHHHh
Confidence 35677889999999999999999999999999999999999999999999999999999999999999998 99999999
Q ss_pred CCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHH
Q 022721 88 GKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVR 167 (293)
Q Consensus 88 G~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~ 167 (293)
|++++ |+||+++||+|+++|++++.+.+
T Consensus 162 g~~~~-a~eA~~~GLv~~vv~~~~l~~~a--------------------------------------------------- 189 (258)
T PRK06190 162 GDFLD-AADALRAGLVTEVVPHDELLPRA--------------------------------------------------- 189 (258)
T ss_pred CCccC-HHHHHHcCCCeEecCHhHHHHHH---------------------------------------------------
Confidence 99999 99999999999999977666533
Q ss_pred HHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCC
Q 022721 168 QIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLR 244 (293)
Q Consensus 168 ~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~ 244 (293)
.+|++ +|.++||.+++.+|++++... ..++++.++.|...+..++.+
T Consensus 190 -----------------~~~a~----~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~~s 236 (258)
T PRK06190 190 -----------------RRLAA----SIAGNNPAAVRALKASYDDGA---------AAQTGDALALEAEAARAHNRS 236 (258)
T ss_pred -----------------HHHHH----HHHcCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHHHHcC
Confidence 34666 899999999999999999876 668999999999988887766
No 72
>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=99.97 E-value=9.7e-31 Score=224.23 Aligned_cols=184 Identities=16% Similarity=0.209 Sum_probs=163.4
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHH
Q 022721 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 82 (293)
Q Consensus 3 ~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~ 82 (293)
.|......++..|..+|.|+||+++|.++|||++|+++||+|+|+++++|+++|++++++|+.|++++|+|++|.. +++
T Consensus 108 ~fV~~lR~~~~dIe~Lp~P~IAAidG~ALGGGLElALACDiRva~s~akmGLvET~laiiPGaGGtQRLpR~vg~a-laK 186 (291)
T KOG1679|consen 108 RFVNGLRGLFNDIERLPQPVIAAIDGAALGGGLELALACDIRVAASSAKMGLVETKLAIIPGAGGTQRLPRIVGVA-LAK 186 (291)
T ss_pred HHHHHHHHHHHHHHhCCccceehhcchhcccchhhhhhccceehhhhccccccccceeeecCCCccchhHHHHhHH-HHH
Confidence 5777888899999999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCC
Q 022721 83 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 162 (293)
Q Consensus 83 ~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~ 162 (293)
+|++||+.++ +.||..+|+||++|..++-.+.+.+
T Consensus 187 ELIftarvl~-g~eA~~lGlVnhvv~qneegdaa~~-------------------------------------------- 221 (291)
T KOG1679|consen 187 ELIFTARVLN-GAEAAKLGLVNHVVEQNEEGDAAYQ-------------------------------------------- 221 (291)
T ss_pred hHhhhheecc-chhHHhcchHHHHHhcCccccHHHH--------------------------------------------
Confidence 9999999999 8999999999999976532221111
Q ss_pred CCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhC
Q 022721 163 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 242 (293)
Q Consensus 163 ~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~ 242 (293)
+..++|+ +|.-+.|.+++++|..++++. .-++..++..|..-.+..+
T Consensus 222 --------------------kal~lA~----eilp~gPiavr~aKlAIn~G~---------evdiasgl~iEe~CYaq~i 268 (291)
T KOG1679|consen 222 --------------------KALELAR----EILPQGPIAVRLAKLAINLGM---------EVDIASGLSIEEMCYAQII 268 (291)
T ss_pred --------------------HHHHHHH----HhccCCchhhhHHHHHhccCc---------eecccccccHHHHHHHhcC
Confidence 0134555 999999999999999999988 6678888988888888888
Q ss_pred CCCcHHHHHHHHhhCCCCCCCCCCC
Q 022721 243 LRSDFAEGVRAVLVDKDQNPKWNPA 267 (293)
Q Consensus 243 ~~~d~~egv~a~lv~k~r~P~w~~~ 267 (293)
-+.|--||+.+|- +| |.|.++++
T Consensus 269 ~t~drLeglaaf~-ek-r~p~y~G~ 291 (291)
T KOG1679|consen 269 PTKDRLEGLAAFK-EK-RKPEYKGE 291 (291)
T ss_pred cHHHHHHHHHHHH-hh-cCCCcCCC
Confidence 9999999999999 88 89998763
No 73
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=99.96 E-value=3.9e-29 Score=255.03 Aligned_cols=211 Identities=19% Similarity=0.206 Sum_probs=160.7
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHH
Q 022721 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 82 (293)
Q Consensus 3 ~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~ 82 (293)
.|++...+++.+|..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. .++
T Consensus 86 ~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~LAlacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~rlvG~~-~A~ 164 (715)
T PRK11730 86 QWLHFANSIFNRLEDLPVPTVAAINGYALGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGAD-NAL 164 (715)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCchHHHHHHHhcCHH-HHH
Confidence 3555566788899999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCC
Q 022721 83 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 162 (293)
Q Consensus 83 ~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~ 162 (293)
+|++||++++ |+||+++||+|++||++++.+.+.++++.. ...+. ............+.. ..+..++.
T Consensus 165 ~llltG~~~~-A~eA~~~GLv~~vv~~~~l~~~a~~~a~~l-a~~~~-------~~~~~~~~~~~p~a~--~~~~~~~~- 232 (715)
T PRK11730 165 EWIAAGKDVR-AEDALKVGAVDAVVAPEKLQEAALALLKQA-IAGKL-------DWKARRQPKLEPLKL--SKIEAMMS- 232 (715)
T ss_pred HHHHcCCcCC-HHHHHHCCCCeEecCHHHHHHHHHHHHHHH-hhcCC-------ccccccCcccccccc--cchhHHHH-
Confidence 9999999999 999999999999999998888777765531 11000 000000000000000 00111110
Q ss_pred CCCHHHHHHHHHhcccccchhHHHHHHHHH-HHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhh
Q 022721 163 EKSVRQIIEELKKHQSSAETSVAQWADEAL-QGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 241 (293)
Q Consensus 163 ~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~-~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~ 241 (293)
...+++.+ ++...+.|.++ .++++++.+. ..+++++++.|.+.+..+
T Consensus 233 ----------------------~~~~k~~~~~~~~~~~pa~~-~~~~~i~~~~---------~~~~~~~l~~E~~~~~~~ 280 (715)
T PRK11730 233 ----------------------FTTAKGMVAQKAGKHYPAPM-TAVKTIEAAA---------GLGRDEALELEAKGFVKL 280 (715)
T ss_pred ----------------------HHHHHHHHHHhhccCCccHH-HHHHHHHHHh---------cCCHHHHHHHHHHHHHHH
Confidence 12333222 34566677776 7777888876 568999999999999999
Q ss_pred CCCCcHHHHHHHHhhCC
Q 022721 242 SLRSDFAEGVRAVLVDK 258 (293)
Q Consensus 242 ~~~~d~~egv~a~lv~k 258 (293)
+.++|++||+++|+.++
T Consensus 281 ~~s~d~~egi~aF~~~~ 297 (715)
T PRK11730 281 AKTNVARALVGIFLNDQ 297 (715)
T ss_pred hCCHHHHHHHHHHHHHH
Confidence 99999999999999443
No 74
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=99.96 E-value=1.1e-28 Score=251.59 Aligned_cols=206 Identities=18% Similarity=0.178 Sum_probs=158.8
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCC--eEEeCcccCCCCCCCchHHHHHhcCCCcHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 81 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~--a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a 81 (293)
+.+....++.+|..+|||+||+|||+|+|||++|+++||||||+++ ++|++||+++|++|++|++++|++++|.. .+
T Consensus 86 ~~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~a~fg~pe~~lGl~p~~gg~~~L~r~vG~~-~A 164 (708)
T PRK11154 86 LARQGQQLFAEIEALPIPVVAAIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVS-TA 164 (708)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEeCCCCceEeCccccCCCCCCccHHhHHHhhcCHH-HH
Confidence 3344566888999999999999999999999999999999999986 59999999999999999999999999998 99
Q ss_pred HHHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhC
Q 022721 82 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 161 (293)
Q Consensus 82 ~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~ 161 (293)
++|++||++++ |++|+++||+|++++++++.+.+.++++..+..+.. .+... ....
T Consensus 165 ~~llltG~~i~-a~eA~~~GLv~~vv~~~~l~~~a~~~A~~~~~~~~~-----------------~~~~~------~~~~ 220 (708)
T PRK11154 165 LDMILTGKQLR-AKQALKLGLVDDVVPHSILLEVAVELAKKGKPARRP-----------------LPVRE------RLLE 220 (708)
T ss_pred HHHHHhCCcCC-HHHHHHCCCCcEecChHHHHHHHHHHHHhcCCccCc-----------------CCchh------hhcc
Confidence 99999999999 999999999999999999888887776641100000 00000 0000
Q ss_pred CC-CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHh
Q 022721 162 SE-KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 240 (293)
Q Consensus 162 ~~-~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~ 240 (293)
.. .....+ .+.+.+..++-.+....+++.+|++++.+. ..+++++++.|.+.+..
T Consensus 221 ~~p~~~~~~---------------~~~~~~~~~~~~~g~~~A~~~~k~~i~~~~---------~~~~~~~l~~E~~~~~~ 276 (708)
T PRK11154 221 GNPLGRALL---------------FKQARKKTLAKTQGNYPAPERILDVVRTGL---------EKGMSSGYEAEARAFGE 276 (708)
T ss_pred cCchhHHHH---------------HHHHHHHHHHhcccCChHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHH
Confidence 00 000011 112222222222333468999999999887 66899999999999999
Q ss_pred hCCCCcHHHHHHHHhhCC
Q 022721 241 SSLRSDFAEGVRAVLVDK 258 (293)
Q Consensus 241 ~~~~~d~~egv~a~lv~k 258 (293)
++.++|+++|+++|+.++
T Consensus 277 ~~~s~~~~~~~~aF~~~~ 294 (708)
T PRK11154 277 LAMTPESAALRSIFFATT 294 (708)
T ss_pred HhCCHHHHHHHHHHHHHH
Confidence 999999999999999765
No 75
>PRK05869 enoyl-CoA hydratase; Validated
Probab=99.96 E-value=1.5e-28 Score=218.24 Aligned_cols=136 Identities=19% Similarity=0.278 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHH
Q 022721 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 84 (293)
Q Consensus 5 ~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l 84 (293)
++...+++.+|.++|||+||++||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. .++++
T Consensus 85 ~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~-~a~~l 163 (222)
T PRK05869 85 ARVRQQAVDAVAAIPKPTVAAITGYALGAGLTLALAADWRVSGDNVKFGATEILAGLAPSGDGMARLTRAAGPS-RAKEL 163 (222)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCEeecHHHHHHHhCCEEEecCCCEEcCchhccCCCCCccHHHHHHHHhCHH-HHHHH
Confidence 34446788899999999999999999999999999999999999999999999999999999999999999987 99999
Q ss_pred hhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCC
Q 022721 85 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEK 164 (293)
Q Consensus 85 ~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~ 164 (293)
++||++++ |++|+++||+|+++|++++.+.+
T Consensus 164 ~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a------------------------------------------------ 194 (222)
T PRK05869 164 VFSGRFFD-AEEALALGLIDEMVAPDDVYDAA------------------------------------------------ 194 (222)
T ss_pred HHcCCCcC-HHHHHHCCCCCEeeCchHHHHHH------------------------------------------------
Confidence 99999999 99999999999999987666533
Q ss_pred CHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHh
Q 022721 165 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 214 (293)
Q Consensus 165 t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~ 214 (293)
.+||+ +|+..+|.+++.+|+++++..
T Consensus 195 --------------------~~~a~----~ia~~~~~a~~~~K~~~~~~~ 220 (222)
T PRK05869 195 --------------------AAWAR----RFLDGPPHALAAAKAGISDVY 220 (222)
T ss_pred --------------------HHHHH----HHHcCCHHHHHHHHHHHHHHh
Confidence 34666 999999999999999998764
No 76
>PRK06213 enoyl-CoA hydratase; Provisional
Probab=99.96 E-value=1.9e-28 Score=218.50 Aligned_cols=152 Identities=17% Similarity=0.115 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCC-eEEeCcccCCCCCCCchHHHHHhcCCCcHHHH
Q 022721 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 81 (293)
Q Consensus 3 ~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~-a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a 81 (293)
.++...++++.++..+|||+||++||+|+|||++|+++||||||+++ ++|++||+++|++|+.|+..++++.+|.. .+
T Consensus 75 ~~~~~~~~l~~~l~~~~kPvIAav~G~a~GgG~~lal~~D~rva~~~~a~f~~pe~~~Gl~~~~~~~~~l~~~~g~~-~a 153 (229)
T PRK06213 75 ALLTAGSTLARRLLSHPKPVIVACTGHAIAKGAFLLLSADYRIGVHGPFKIGLNEVAIGMTMPHAAIELARDRLTPS-AF 153 (229)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEcCeeeHHHHHHHHhCCeeeEecCCcEEECchhhhCCcCChHHHHHHHHHcCHH-HH
Confidence 45566677888999999999999999999999999999999999999 99999999999998888788888889987 99
Q ss_pred HHHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhC
Q 022721 82 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 161 (293)
Q Consensus 82 ~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~ 161 (293)
++|++||++++ |+||+++||+|+++|++++.+.+
T Consensus 154 ~~lll~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a--------------------------------------------- 187 (229)
T PRK06213 154 QRAVINAEMFD-PEEAVAAGFLDEVVPPEQLLARA--------------------------------------------- 187 (229)
T ss_pred HHHHHcCcccC-HHHHHHCCCceeccChHHHHHHH---------------------------------------------
Confidence 99999999999 99999999999999877665533
Q ss_pred CCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHH
Q 022721 162 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 237 (293)
Q Consensus 162 ~~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~ 237 (293)
.+|++ +|.+.+|.+++.+|++++... ..++.+.++.|.+.
T Consensus 188 -----------------------~~~a~----~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~~~~~ 227 (229)
T PRK06213 188 -----------------------QAAAR----ELAGLNMGAHAATKLKVRAAA---------LEAIRAAIEGDAAE 227 (229)
T ss_pred -----------------------HHHHH----HHhcCCHHHHHHHHHHHHHHH---------HHHHHhchhhhhhh
Confidence 34666 899999999999999999876 55688888777664
No 77
>PRK08788 enoyl-CoA hydratase; Validated
Probab=99.96 E-value=5.4e-28 Score=222.07 Aligned_cols=155 Identities=15% Similarity=0.096 Sum_probs=133.6
Q ss_pred hCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcCCCCCCHHH
Q 022721 17 EYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSD 96 (293)
Q Consensus 17 ~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG~~l~~a~e 96 (293)
.+|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. .+++|++||+.++ |+|
T Consensus 119 ~~pkPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pev~lGl~p~~g~~~~l~~~vG~~-~A~ellltG~~l~-A~e 196 (287)
T PRK08788 119 GAGAISIALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGAYSFLARRVGPK-LAEELILSGKLYT-AEE 196 (287)
T ss_pred CCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEeeCchhhhCcCCCchHHHHHHHHhhHH-HHHHHHHcCCCCC-HHH
Confidence 79999999999999999999999999999999999999999999999999999999999998 9999999999999 999
Q ss_pred HHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHHHHHHHHHhc
Q 022721 97 ALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKH 176 (293)
Q Consensus 97 A~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~i~~~l~~~ 176 (293)
|.++||||+++|++++.+.+
T Consensus 197 A~~~GLV~~vv~~~el~~~a------------------------------------------------------------ 216 (287)
T PRK08788 197 LHDMGLVDVLVEDGQGEAAV------------------------------------------------------------ 216 (287)
T ss_pred HHHCCCCcEecCchHHHHHH------------------------------------------------------------
Confidence 99999999999988766543
Q ss_pred ccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCC-CCcHHHHHHHHh
Q 022721 177 QSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL-RSDFAEGVRAVL 255 (293)
Q Consensus 177 ~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~-~~d~~egv~a~l 255 (293)
.+|++ +|+.. |.+....|+..+... ..++++.+..|......+++ .+.-.+-+..|.
T Consensus 217 --------~~~a~----~ia~~-~~~~~a~k~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (287)
T PRK08788 217 --------RTFIR----KSKRK-LNGWRAMLRARRRVN---------PLSLEELMDITEIWVDAALQLEEKDLRTMERLV 274 (287)
T ss_pred --------HHHHH----HHhcC-ccHHHHHHHHHHhhc---------cCCHHHHHHHHHHHHHHHhhcccccHHHHHHHH
Confidence 34666 78876 777777777777655 45789999998887777554 344466777775
No 78
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=99.96 E-value=1.1e-27 Score=243.96 Aligned_cols=204 Identities=16% Similarity=0.154 Sum_probs=158.8
Q ss_pred HHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCC--eEEeCcccCCCCCCCchHHHHHhcCCCcHHHHH
Q 022721 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 82 (293)
Q Consensus 5 ~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~--a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~ 82 (293)
+.....++..|..+|||+||+|||+|+|||++|+++||||||+++ ++|++||+++|++|++|++++|+|++|.. .++
T Consensus 82 ~~~~~~~~~~l~~~~kPvIAaVnG~a~GgG~~LaLacD~ria~~~~~a~fg~pev~lGl~p~~g~~~~L~r~vG~~-~A~ 160 (699)
T TIGR02440 82 AQQGQVLFAELEALPIPVVAAIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVS-TAL 160 (699)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCcEEechhhcccCCCCccHHHHHHHhcCHH-HHH
Confidence 344566788999999999999999999999999999999999976 79999999999999999999999999998 999
Q ss_pred HHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccC-CCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhC
Q 022721 83 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFS-EDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 161 (293)
Q Consensus 83 ~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~ 161 (293)
+|++||+.++ |++|+++||+|++||++++.+.+.++++.... .+|. .+.. +.-.
T Consensus 161 ~llltG~~~~-a~eA~~~GLV~~vv~~~~l~~~a~~~A~~~~~~~~~~------------------~~~~------~~~~ 215 (699)
T TIGR02440 161 DMILTGKQLR-AKQALKLGLVDDVVPQSILLDTAVEMALKGKPIRKPL------------------SLQE------RLLE 215 (699)
T ss_pred HHHHcCCcCC-HHHHHhCCCCcEecChhHHHHHHHHHHHhCCCCCCCc------------------cchh------hhcc
Confidence 9999999999 99999999999999999998888777653000 0000 0000 0000
Q ss_pred CC-CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHh
Q 022721 162 SE-KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 240 (293)
Q Consensus 162 ~~-~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~ 240 (293)
.. .....+ .+++.+..++-......+.+.+++.++.+. ..+++++++.|.+.+..
T Consensus 216 ~~~~a~~~~---------------~~~~~k~~~~~~~~~~~a~~~~~~~i~~~~---------~~~~~~~l~~E~~~~~~ 271 (699)
T TIGR02440 216 GTPLGRALL---------------FDQAAKKTAKKTQGNYPAAERILDVVRQGL---------AQGMQKGLDAEARAFGE 271 (699)
T ss_pred cCchhHHHH---------------HHHHHHHHHHhcccCChhHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHH
Confidence 00 000001 112222222223444667888999999887 67899999999999999
Q ss_pred hCCCCcHHHHHHHHhhCC
Q 022721 241 SSLRSDFAEGVRAVLVDK 258 (293)
Q Consensus 241 ~~~~~d~~egv~a~lv~k 258 (293)
++.++|+++++++|+.++
T Consensus 272 ~~~s~~~~~~~~~f~~~~ 289 (699)
T TIGR02440 272 LVMTPESAALRSIFFATT 289 (699)
T ss_pred hcCCHHHHHHHHHHHHHH
Confidence 999999999999998765
No 79
>PRK08290 enoyl-CoA hydratase; Provisional
Probab=99.95 E-value=7.5e-28 Score=221.61 Aligned_cols=155 Identities=16% Similarity=0.253 Sum_probs=134.4
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhc
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMT 87 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~lt 87 (293)
+..+...|.++|||+||+|||+|+|||++|+++||||||+++++|++||+++|+ |+. +++.+++++|.. .+++|++|
T Consensus 107 ~~~~~~~l~~~pkPvIAaVnG~a~GgG~~lalacD~ria~e~a~f~~pe~~lGl-~~~-~~~~l~~~iG~~-~A~~lllt 183 (288)
T PRK08290 107 YLGMCRRWRDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAFFSDPVVRMGI-PGV-EYFAHPWELGPR-KAKELLFT 183 (288)
T ss_pred HHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHhCCEEEeeCCCEecCcccccCc-Ccc-hHHHHHHHhhHH-HHHHHHHc
Confidence 345677899999999999999999999999999999999999999999999998 443 456788999998 99999999
Q ss_pred CCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCHH
Q 022721 88 GKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVR 167 (293)
Q Consensus 88 G~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~ 167 (293)
|+.++ |+||+++||||++||++++++.+
T Consensus 184 G~~i~-A~eA~~~GLV~~vv~~~~l~~~a--------------------------------------------------- 211 (288)
T PRK08290 184 GDRLT-ADEAHRLGMVNRVVPRDELEAET--------------------------------------------------- 211 (288)
T ss_pred CCCCC-HHHHHHCCCccEeeCHHHHHHHH---------------------------------------------------
Confidence 99999 99999999999999977666543
Q ss_pred HHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhC-CCCc
Q 022721 168 QIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS-LRSD 246 (293)
Q Consensus 168 ~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~-~~~d 246 (293)
.++++ +|++.||.+++.+|+++++.. ....+++++..|.......+ ++++
T Consensus 212 -----------------~~~a~----~la~~~~~a~~~~K~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (288)
T PRK08290 212 -----------------LELAR----RIAAMPPFGLRLTKRAVNQTL--------DAQGFRAALDAVFDLHQLGHAHNAE 262 (288)
T ss_pred -----------------HHHHH----HHHhCCHHHHHHHHHHHHHHH--------hhccHHHHHHHHHHHHHHccccchh
Confidence 34666 999999999999999999876 12368999999999888876 4544
No 80
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase. Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=99.95 E-value=3.1e-27 Score=220.37 Aligned_cols=216 Identities=16% Similarity=0.097 Sum_probs=149.8
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 83 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~ 83 (293)
|++.+..++.+|..++|||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. .+++
T Consensus 109 ~~~~~~~l~~~i~~~pKPVIAAVnG~AiGGGleLALaCDlrIAse~A~Fg~PE~rlGl~P~~Ggt~rLprlvG~~-rA~~ 187 (360)
T TIGR03200 109 YMRLFNDMVSAILGCDKPVICRVNGMRIGGGQEIGMAADFTIAQDLANFGQAGPKHGSAPIGGATDFLPLMIGCE-QAMV 187 (360)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCEeeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhhCHH-HHHH
Confidence 444456778889999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCC----CCCCchhccchhHHHhh
Q 022721 84 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSD----PEGEAPLKLLLPQITSC 159 (293)
Q Consensus 84 l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~l~~~~~~i~~~ 159 (293)
+++||++++ |++|+++||||++||+.+++. .|..+|.......+..|..- +.....+...+..+..+
T Consensus 188 llltGe~~s-A~EA~~~GLVd~VVp~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 258 (360)
T TIGR03200 188 SGTLCEPWS-AHKAKRLGIIMDVVPALKVDG--------KFVANPLVVTDRYLDEFGRIVHGEFKAGDELKAGKELIKQG 258 (360)
T ss_pred HHHhCCcCc-HHHHHHcCChheecCchhcCc--------chhcCcccchHHHHHHHhHHhcCCCcchhHHHHHHHHHhcc
Confidence 999999999 999999999999999888742 13334432222333332211 11111233333333221
Q ss_pred hCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHH
Q 022721 160 FSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVAL 239 (293)
Q Consensus 160 f~~~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~ 239 (293)
-....-+++ .|.+++. ++....|.++.-+++-++.-+ ...+...-+.-...+.
T Consensus 259 ~~~~~~l~~--------------~~~~l~~----~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 311 (360)
T TIGR03200 259 TIDLSLLDE--------------AVEALCA----KLLNTFPECLTKSIEELRKPK---------LFAWNQNKENSRAWLA 311 (360)
T ss_pred cchHhHHHH--------------HHHHHHH----HHHHhchHHHHHHHHHhhhHH---------HHHHHhhhhhhHHHHH
Confidence 000001111 1233444 778888999998888888765 3233332222222222
Q ss_pred hhCCCCcHHHHHHHHhhCC
Q 022721 240 RSSLRSDFAEGVRAVLVDK 258 (293)
Q Consensus 240 ~~~~~~d~~egv~a~lv~k 258 (293)
.-+. .+..+|++||- ++
T Consensus 312 ~~~~-~~~~~~~~~~~-~~ 328 (360)
T TIGR03200 312 LNMM-NEARTGFRAFN-EG 328 (360)
T ss_pred hhcc-cccchhhHHHh-cc
Confidence 2222 67789999998 63
No 81
>KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=99.95 E-value=1.9e-28 Score=211.87 Aligned_cols=180 Identities=19% Similarity=0.263 Sum_probs=160.1
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHH
Q 022721 2 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 81 (293)
Q Consensus 2 ~~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a 81 (293)
+.+++..++.+.+|.+||||||++++|+|+|||+.|..+||+|+|++++.|...|+.+|+..++|.-.+||+.+|..+.+
T Consensus 109 rr~Ik~~Q~~~t~ie~CpKPVIaavHg~CiGagvDLiTAcDIRycsqDAffsvkEVDvglaADvGTL~RlpkvVGn~s~~ 188 (292)
T KOG1681|consen 109 RRIIKRYQDTFTAIERCPKPVIAAVHGACIGAGVDLITACDIRYCSQDAFFSVKEVDVGLAADVGTLNRLPKVVGNQSLA 188 (292)
T ss_pred HHHHHHHHHHHHHHHhCChhHHHHHHhhhccccccceeecceeeecccceeeeeeeeeehhhchhhHhhhhHHhcchHHH
Confidence 45666777889999999999999999999999999999999999999999999999999999999999999999977799
Q ss_pred HHHhhcCCCCCCHHHHHHcCccceeccCCC-hHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhh
Q 022721 82 AYLGMTGKRISTPSDALFAGLGTDYVPSGN-LGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 160 (293)
Q Consensus 82 ~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~-l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f 160 (293)
+++++|++.|. |.||++.||+.+++|+-+ +...
T Consensus 189 ~elafTar~f~-a~EAl~~GLvSrvf~dk~~ll~~--------------------------------------------- 222 (292)
T KOG1681|consen 189 RELAFTARKFS-ADEALDSGLVSRVFPDKEELLNG--------------------------------------------- 222 (292)
T ss_pred HHHHhhhhhcc-hhhhhhcCcchhhcCCHHHHHhh---------------------------------------------
Confidence 99999999999 999999999999998532 1110
Q ss_pred CCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHh
Q 022721 161 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 240 (293)
Q Consensus 161 ~~~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~ 240 (293)
+...|. .|+.+||.++..||+.|++++ ..+.+++|.+-......
T Consensus 223 -----------------------~l~mA~----~Ia~KSpvaVqgTK~~L~ysr---------ehsv~~sLnyvatwNms 266 (292)
T KOG1681|consen 223 -----------------------ALPMAE----LIASKSPVAVQGTKENLLYSR---------EHSVEESLNYVATWNMS 266 (292)
T ss_pred -----------------------hHHHHH----HhccCCceeeechHHHHHHHh---------hhhhhhhHHHHHHHHHH
Confidence 134566 999999999999999999999 88999999998888888
Q ss_pred hCCCCcHHHHHHHHhhCCCCCCC-CC
Q 022721 241 SSLRSDFAEGVRAVLVDKDQNPK-WN 265 (293)
Q Consensus 241 ~~~~~d~~egv~a~lv~k~r~P~-w~ 265 (293)
.+.++|+.+.+.+.+ .| ++|. |.
T Consensus 267 ~L~s~Dl~~av~a~m-~k-~k~~tfs 290 (292)
T KOG1681|consen 267 MLLSDDLVKAVMAQM-EK-LKTVTFS 290 (292)
T ss_pred HHHHHHHHHHHHHHh-hc-CCCCCcc
Confidence 899999999999999 56 4443 54
No 82
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=99.95 E-value=6.4e-27 Score=238.54 Aligned_cols=210 Identities=20% Similarity=0.217 Sum_probs=155.7
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 83 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~ 83 (293)
+++...+++.+|..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. .+++
T Consensus 87 ~~~~~~~~~~~i~~~pkPvIAai~G~alGGGleLalacD~ria~~~a~fglPEv~lGl~Pg~Ggt~rL~rliG~~-~A~~ 165 (714)
T TIGR02437 87 WLLFANSIFNKLEDLPVPTVAAINGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGAD-NALE 165 (714)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEecchhhcCCCCCccHHHHHHHHhCHH-HHHH
Confidence 444556788899999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCC
Q 022721 84 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 163 (293)
Q Consensus 84 l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~ 163 (293)
|++||++++ |++|+++||+|+++|++++.+.+.++++......+ ............+. .+.+..++.
T Consensus 166 llltG~~~~-A~eA~~~GLvd~vv~~~~l~~~a~~~a~~~~~~~~--------~~~~~~~~~~~~~~--~~~~~~~~~-- 232 (714)
T TIGR02437 166 WIASGKENR-AEDALKVGAVDAVVTADKLGAAALQLLKDAINGKL--------DWKAKRQPKLEPLK--LSKIEAMMS-- 232 (714)
T ss_pred HHHcCCcCC-HHHHHHCCCCcEeeChhHHHHHHHHHHHHHhhcCC--------cccccCCCCccccc--ccchHHHHH--
Confidence 999999999 99999999999999998898887776653111000 00000000000000 010111111
Q ss_pred CCHHHHHHHHHhcccccchhHHHHHHH-HHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhC
Q 022721 164 KSVRQIIEELKKHQSSAETSVAQWADE-ALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 242 (293)
Q Consensus 164 ~t~~~i~~~l~~~~~~~~~~~~~~a~~-~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~ 242 (293)
.+.+.+ ..++-..+-|.. ..+.+.++.+. ..+++++++.|.+.+..++
T Consensus 233 ---------------------~~~~~~~~~~~~~~~~pap-~~~~~~v~~~~---------~~~~~~gl~~E~~~f~~l~ 281 (714)
T TIGR02437 233 ---------------------FTTAKGMVAQVAGPHYPAP-MTAVKTIEKAA---------RFGRDKALEIEAKGFVKLA 281 (714)
T ss_pred ---------------------HHHHHHHHHHhhcCCCCCH-HHHHHHHHHHh---------cCCHHHHHHHHHHHHHHHh
Confidence 112222 222333333333 33445777766 5679999999999999999
Q ss_pred CCCcHHHHHHHHhhCC
Q 022721 243 LRSDFAEGVRAVLVDK 258 (293)
Q Consensus 243 ~~~d~~egv~a~lv~k 258 (293)
.+++.+..++.|+.++
T Consensus 282 ~s~~a~~l~~~ff~~r 297 (714)
T TIGR02437 282 KTSEAKALIGLFLNDQ 297 (714)
T ss_pred CCHHHHHHHHHHhhhH
Confidence 9999999999999775
No 83
>PRK08272 enoyl-CoA hydratase; Provisional
Probab=99.94 E-value=2.5e-26 Score=212.80 Aligned_cols=133 Identities=17% Similarity=0.176 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHH
Q 022721 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 84 (293)
Q Consensus 5 ~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l 84 (293)
+.....++.+|..+|||+||+|||+|+|||++|+++||+|||+++++|++||+++|.+|..+ .+++++|.+ .+++|
T Consensus 113 ~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~~ias~~a~f~~pe~~~gg~~~~~---~~~~~vG~~-~A~~l 188 (302)
T PRK08272 113 MSRFVRGFMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDAKIGYPPTRVWGVPATG---MWAYRLGPQ-RAKRL 188 (302)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEccEeehhhHHHHHhCCEEEEeCCCEecCcchhcccCChHH---HHHHHhhHH-HHHHH
Confidence 44556778899999999999999999999999999999999999999999999986666532 467789988 99999
Q ss_pred hhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCC
Q 022721 85 GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEK 164 (293)
Q Consensus 85 ~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~ 164 (293)
++||++++ |+||+++||||++||++++++.+
T Consensus 189 lltG~~i~-a~eA~~~GLv~~vv~~~~l~~~a------------------------------------------------ 219 (302)
T PRK08272 189 LFTGDCIT-GAQAAEWGLAVEAVPPEELDERT------------------------------------------------ 219 (302)
T ss_pred HHcCCccC-HHHHHHcCCCceecCHHHHHHHH------------------------------------------------
Confidence 99999999 99999999999999977666543
Q ss_pred CHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHh
Q 022721 165 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 214 (293)
Q Consensus 165 t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~ 214 (293)
.++|+ +|++.+|.+++.+|+++++..
T Consensus 220 --------------------~~la~----~ia~~~~~a~~~~K~~l~~~~ 245 (302)
T PRK08272 220 --------------------ERLVE----RIAAVPVNQLAMVKLAVNSAL 245 (302)
T ss_pred --------------------HHHHH----HHHcCCHHHHHHHHHHHHHHH
Confidence 34666 899999999999999999876
No 84
>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A.
Probab=99.94 E-value=1.7e-26 Score=185.47 Aligned_cols=117 Identities=44% Similarity=0.760 Sum_probs=100.9
Q ss_pred hccchhHHHhhhCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHH
Q 022721 149 LKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLS 228 (293)
Q Consensus 149 l~~~~~~i~~~f~~~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~ 228 (293)
|..+++.|++||+.+ |++||+++|+++. .+||.++++.|.++||+|+++|+++++++. ..+++
T Consensus 2 L~~~~~~I~~~F~~~-s~~eI~~~L~~~~-------~~~a~~~~~~l~~~SP~Sl~vt~~~l~~~~---------~~sl~ 64 (118)
T PF13766_consen 2 LAEHLEAIDRCFSAD-SVEEIIEALEADG-------DEWAQKTLETLRSGSPLSLKVTFEQLRRGR---------NLSLA 64 (118)
T ss_dssp CHHCHHHHHHHTTSS-SHHHHHHHHHHHS--------HHHHHHHHHHCCS-HHHHHHHHHHHHCCT---------TS-HH
T ss_pred hHHHHHHHHHHhCCC-CHHHHHHHHHccC-------cHHHHHHHHHHHHCCHHHHHHHHHHHHHhh---------hCCHH
Confidence 556788999999998 9999999999965 689999999999999999999999999998 68999
Q ss_pred HHHHHHHHHHHhhCCCCcHHHHHHHHhhCCCCCCCCCCCCccCCCHHHHHhhhc
Q 022721 229 GVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFE 282 (293)
Q Consensus 229 e~l~~e~~~~~~~~~~~d~~egv~a~lv~k~r~P~w~~~~~~~v~~~~v~~~~~ 282 (293)
++|++|+++..+++.++||.|||||.||||++.|+|++++++||++++|+++|+
T Consensus 65 e~l~~E~~~a~~~~~~~DF~EGVRA~LIDKd~~P~W~p~~l~~V~~~~V~~~f~ 118 (118)
T PF13766_consen 65 ECLRMEYRLASRCMRHPDFAEGVRALLIDKDKNPKWSPASLEDVSDEDVDSFFE 118 (118)
T ss_dssp HHHHHHHHHHHHHHCCSCHHHHHHHHTTS-------SSSSCCCS-HHHHHHHCS
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHhcCCCCCCCCCCChHHCCHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999995
No 85
>KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=99.93 E-value=1.6e-25 Score=190.80 Aligned_cols=178 Identities=21% Similarity=0.338 Sum_probs=155.1
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHH
Q 022721 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 82 (293)
Q Consensus 3 ~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~ 82 (293)
+.|..+-+++.-|+++|.|+|+.+||.+..+|+.|...||++||+++++|..|-..+|++...-+. .+.|.+.+. .++
T Consensus 109 evFqtc~dvmn~Irn~pVPVia~VNG~AaAAGcQLVaSCD~vVa~k~SkF~tPG~~vGlFCSTPGv-AlaRavpRk-va~ 186 (287)
T KOG1682|consen 109 EVFQTCTDVMNDIRNLPVPVIAKVNGYAAAAGCQLVASCDMVVATKNSKFSTPGAGVGLFCSTPGV-ALARAVPRK-VAA 186 (287)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEecchhhhccceEEEeeeEEEEecCccccCCCCceeeEecCcch-hHhhhcchh-HHH
Confidence 457788899999999999999999999999999999999999999999999999999998543322 477888887 999
Q ss_pred HHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCC
Q 022721 83 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 162 (293)
Q Consensus 83 ~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~ 162 (293)
||++||.+++ +++|+..||++++||.++++..++++
T Consensus 187 ~ML~Tg~Pi~-~eeAl~sGlvskvVp~~el~~e~~~i------------------------------------------- 222 (287)
T KOG1682|consen 187 YMLMTGLPIT-GEEALISGLVSKVVPAEELDKEIEEI------------------------------------------- 222 (287)
T ss_pred HHHHhCCCCc-hHHHHHhhhhhhcCCHHHHHHHHHHH-------------------------------------------
Confidence 9999999999 99999999999999999888765443
Q ss_pred CCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhC
Q 022721 163 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 242 (293)
Q Consensus 163 ~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~ 242 (293)
+. .|...|...+.+.|+.+.... ..+-.|++....+.+..-+
T Consensus 223 -------------------------~~----~i~~~srav~slgk~f~y~q~---------~ms~~ea~~~~~~~m~~n~ 264 (287)
T KOG1682|consen 223 -------------------------TN----AIKAKSRAVISLGKEFYYKQL---------AMSQAEAFSAAQEKMCENF 264 (287)
T ss_pred -------------------------HH----HHhhhHHHHHHHHHHHHHHHH---------HHhHHHHHHHHHHHHhhcc
Confidence 33 666777777788888877666 5577889988888888889
Q ss_pred CCCcHHHHHHHHhhCCCCCCCCCC
Q 022721 243 LRSDFAEGVRAVLVDKDQNPKWNP 266 (293)
Q Consensus 243 ~~~d~~egv~a~lv~k~r~P~w~~ 266 (293)
+-.|.+|||.+|+ +| |.|.|.+
T Consensus 265 ql~d~kegiasf~-~k-rp~~~~h 286 (287)
T KOG1682|consen 265 QLGDTKEGIASFF-EK-RPPNWKH 286 (287)
T ss_pred cccchHHHHHHHh-cc-CCCCcCC
Confidence 9999999999999 99 8999986
No 86
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=99.93 E-value=5.3e-25 Score=225.06 Aligned_cols=213 Identities=18% Similarity=0.144 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCC--eEEeCcccCCCCCCCchHHHHHhcCCCcHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 81 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~--a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a 81 (293)
+++...+++.+|..++||+||+|||+|+|||++|+++||||||+++ ++|++||+++|++|++|++++|+|++|.. .+
T Consensus 93 ~~~~~~~l~~~i~~~~kPvIAav~G~a~GgG~eLALacD~ria~~~a~a~fglpEv~lGl~Pg~Ggt~rLprliG~~-~A 171 (737)
T TIGR02441 93 LSQEGQEMFERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRKTLLGLPEVMLGLLPGAGGTQRLPKLTGVP-AA 171 (737)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCCeEecchhhhCCCCCccHhhhHHHhhCHH-HH
Confidence 4455667889999999999999999999999999999999999987 58999999999999999999999999998 99
Q ss_pred HHHhhcCCCCCCHHHHHHcCccceeccC--C-----------ChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCch
Q 022721 82 AYLGMTGKRISTPSDALFAGLGTDYVPS--G-----------NLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAP 148 (293)
Q Consensus 82 ~~l~ltG~~l~~a~eA~~~Gl~~~~v~~--~-----------~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 148 (293)
++|++||++++ |++|+++||||++||+ + .+.+.+.++++. +..- ....+...
T Consensus 172 ~~l~ltG~~i~-a~eA~~~GLVd~vv~~~~~~~~~l~~~~~~~l~~~A~~~a~~-------------l~~~-~~~~~~~~ 236 (737)
T TIGR02441 172 LDMMLTGKKIR-ADRAKKMGIVDQLVDPLGPGLKPAEENTIEYLEEVAVKFAQG-------------LANG-KLSINRDK 236 (737)
T ss_pred HHHHHcCCcCC-HHHHHHCCCCeEecCCcccccccchhhhHHHHHHHHHHHHHH-------------hhcc-cCCccccc
Confidence 99999999999 9999999999999986 1 133333222211 0000 00000000
Q ss_pred -hccchhHHHhhhCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCH
Q 022721 149 -LKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKL 227 (293)
Q Consensus 149 -l~~~~~~i~~~f~~~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~ 227 (293)
...... ....+.......++ +.+.+.+.+=......+-..+.+.+..+. ..++
T Consensus 237 ~~~~~~~--~~~~~~~~~~~~~~---------------~~~~~~~~~~~~g~~~Ap~~~l~~v~~~~---------~~~~ 290 (737)
T TIGR02441 237 GLVHKIT--QYVMTNPFVRQQVY---------------KTAEDKVMKQTKGLYPAPLKILDVVRTGY---------DQGP 290 (737)
T ss_pred cccCccc--hhhcccchhHHHHH---------------HHHHHHHHHhccCCCccHHHHHHHHHHHh---------cCCH
Confidence 000000 00000000001111 11221111112221233345556777766 5679
Q ss_pred HHHHHHHHHHHHhhCCCCcHHHHHHHHhhCC
Q 022721 228 SGVMKYEYRVALRSSLRSDFAEGVRAVLVDK 258 (293)
Q Consensus 228 ~e~l~~e~~~~~~~~~~~d~~egv~a~lv~k 258 (293)
+++++.|.+.+..++.+++.+.-++.|+.++
T Consensus 291 ~~gl~~E~~~f~~l~~s~~a~al~~~f~~~~ 321 (737)
T TIGR02441 291 DAGYEAESKAFGELSMTFESKALIGLFHGQT 321 (737)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998775
No 87
>PLN02267 enoyl-CoA hydratase/isomerase family protein
Probab=99.92 E-value=7.1e-25 Score=196.77 Aligned_cols=108 Identities=17% Similarity=0.203 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEe-CCeEEeCcccCCCCC-CCchHHHHHhcCCCcHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVT-EKTLLAMPENGIGLF-PDVGFSYIAAKGPGGGSVG 81 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riat-e~a~f~~pe~~lGl~-p~~g~~~~l~r~~G~~~~a 81 (293)
+.+...+++.+|..+|||+||+|||+|+|||++|+++||+|||+ ++++|++||+++|++ |+++ +.++++.+|.. .+
T Consensus 79 ~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~~p~~~-~~~l~~~vG~~-~a 156 (239)
T PLN02267 79 MVAKLRPLVADLISLPMPTIAAVTGHASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDYF-MALLRAKIGSP-AA 156 (239)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEECCcchHHHHHHHHHCCEEEecCCCCeEeccccccCCCCChHH-HHHHHHHcChH-HH
Confidence 34455678889999999999999999999999999999999998 578999999999997 6554 66899999987 88
Q ss_pred -HHHhhcCCCCCCHHHHHHcCccceeccC-CChHH
Q 022721 82 -AYLGMTGKRISTPSDALFAGLGTDYVPS-GNLGS 114 (293)
Q Consensus 82 -~~l~ltG~~l~~a~eA~~~Gl~~~~v~~-~~l~~ 114 (293)
++|++||++++ |++|+++||+|+++|+ +++.+
T Consensus 157 ~~~llltG~~~~-a~eA~~~Glv~~vv~~~~~l~~ 190 (239)
T PLN02267 157 RRDVLLRAAKLT-AEEAVEMGIVDSAHDSAEETVE 190 (239)
T ss_pred HHHHHHcCCcCC-HHHHHHCCCcceecCCHHHHHH
Confidence 69999999999 9999999999999985 44544
No 88
>KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism]
Probab=99.92 E-value=2.2e-24 Score=190.26 Aligned_cols=169 Identities=18% Similarity=0.239 Sum_probs=151.8
Q ss_pred HHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhh
Q 022721 7 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM 86 (293)
Q Consensus 7 ~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~l 86 (293)
.+..+...+..+|||+||++||+|+|-|+.+...||+++|++++.|..|.+.+|.+|+++++|.+|+++|.. .+.+|+|
T Consensus 95 ~~~~~v~~fi~f~Kplia~vNGPAIGlgasil~lcD~V~A~Dka~F~TPfa~lGq~PEG~Ss~t~p~imG~~-~A~E~ll 173 (266)
T KOG0016|consen 95 NVSCFVNTFINFPKPLVALVNGPAIGLGASILPLCDYVWASDKAWFQTPFAKLGQSPEGCSSVTLPKIMGSA-SANEMLL 173 (266)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCccchhhHHhhhhheEEeccceEEeccchhcCCCCCcceeeeehHhhchh-hHHHHHH
Confidence 333467789999999999999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred cCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCH
Q 022721 87 TGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSV 166 (293)
Q Consensus 87 tG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~ 166 (293)
-|++++ |+||...|||+++++.+.+.+.+
T Consensus 174 ~~~klt-A~Ea~~~glVskif~~~tf~~~v-------------------------------------------------- 202 (266)
T KOG0016|consen 174 FGEKLT-AQEACEKGLVSKIFPAETFNEEV-------------------------------------------------- 202 (266)
T ss_pred hCCccc-HHHHHhcCchhhhcChHHHHHHH--------------------------------------------------
Confidence 999999 99999999999999976555432
Q ss_pred HHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCc
Q 022721 167 RQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSD 246 (293)
Q Consensus 167 ~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d 246 (293)
.+.++++.+-+|.+++..|++++... ...+..+.+.|-..+...|.++|
T Consensus 203 ----------------------~~~ikq~s~l~p~sl~~~K~L~rs~~---------k~~l~~an~~E~~~l~~~W~s~e 251 (266)
T KOG0016|consen 203 ----------------------LKKIKQYSKLSPESLLGMKKLLRSNI---------KEELIKANEEECNVLLKQWVSAE 251 (266)
T ss_pred ----------------------HHHHHHHhcCCHHHHHHHHHHHHHHH---------HHHHHHhhHHHHHHHHhhccChH
Confidence 22234788899999999999999877 56799999999999999999999
Q ss_pred HHHHHHHHhhCC
Q 022721 247 FAEGVRAVLVDK 258 (293)
Q Consensus 247 ~~egv~a~lv~k 258 (293)
....+.+|+..+
T Consensus 252 ~~~~~~~~~~~~ 263 (266)
T KOG0016|consen 252 CLARFKQYLSKK 263 (266)
T ss_pred HHHHHHHHhccc
Confidence 999999999433
No 89
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]
Probab=99.91 E-value=2.6e-25 Score=191.20 Aligned_cols=171 Identities=22% Similarity=0.301 Sum_probs=141.8
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCC-CCchHHHHHhcCCCcHHHHHHHhh
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF-PDVGFSYIAAKGPGGGSVGAYLGM 86 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~-p~~g~~~~l~r~~G~~~~a~~l~l 86 (293)
..++-..|+.+||||||+|+|+++|||=.|-+.||+-||+++++|+....++|-+ +++|++ +|.|++|.. .+++..+
T Consensus 105 vLdlQrlIR~~PKpViA~V~G~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~-ylar~VGqK-kArEIwf 182 (282)
T COG0447 105 VLDLQRLIRTMPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSS-YLARIVGQK-KAREIWF 182 (282)
T ss_pred hhhHHHHHHhCCcceEEEEeeEeccCccEEEEEeeeeeehhcchhcCCCCCcccccCcccHH-HHHHHhhhh-hhHHhhh
Confidence 3466778999999999999999999999999999999999999999999999998 666665 789999998 9999999
Q ss_pred cCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCchhccchhHHHhhhCCCCCH
Q 022721 87 TGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSV 166 (293)
Q Consensus 87 tG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~ 166 (293)
.++.++ |++|+++|+||.+||-++|+...
T Consensus 183 LcR~Y~-A~eal~MGlVN~Vvp~~~LE~e~-------------------------------------------------- 211 (282)
T COG0447 183 LCRQYD-AEEALDMGLVNTVVPHADLEKET-------------------------------------------------- 211 (282)
T ss_pred hhhhcc-HHHHHhcCceeeeccHHHHHHHH--------------------------------------------------
Confidence 999999 99999999999999988877743
Q ss_pred HHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCc
Q 022721 167 RQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSD 246 (293)
Q Consensus 167 ~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d 246 (293)
.+||+ .|.++||.++|..|-.++... ..+.-.-+..-....-..-+++
T Consensus 212 ------------------v~W~~----E~l~kSP~AlR~LK~Afnad~----------DGlaG~q~~ag~at~L~YmTdE 259 (282)
T COG0447 212 ------------------VQWAR----EMLAKSPTALRMLKAAFNADC----------DGLAGLQELAGNATLLYYMTDE 259 (282)
T ss_pred ------------------HHHHH----HHHhcChHHHHHHHHHhcCCC----------chhhHHHHhcccceEEEEechh
Confidence 46999 999999999999998887532 1121111111111111236899
Q ss_pred HHHHHHHHhhCCCCCCCCC
Q 022721 247 FAEGVRAVLVDKDQNPKWN 265 (293)
Q Consensus 247 ~~egv~a~lv~k~r~P~w~ 265 (293)
..||-.||+ +| |.|.|+
T Consensus 260 a~EGr~AF~-eK-R~Pdf~ 276 (282)
T COG0447 260 AQEGRDAFL-EK-RKPDFS 276 (282)
T ss_pred hhhhHHHHh-hc-cCCChH
Confidence 999999999 99 999987
No 90
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.
Probab=99.90 E-value=1.2e-23 Score=182.11 Aligned_cols=118 Identities=26% Similarity=0.337 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHH
Q 022721 2 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 81 (293)
Q Consensus 2 ~~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a 81 (293)
..|++..+.++.++..++||+||++||+|+|+|+.++++||+||++++++|++||+++|++|+.|+++.+++++|.+ .+
T Consensus 76 ~~~~~~~~~~~~~i~~~~~p~Ia~v~G~a~g~G~~la~~~D~~i~~~~~~~~~pe~~~G~~p~~g~~~~l~~~~g~~-~a 154 (195)
T cd06558 76 RAFIRELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPA-RA 154 (195)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEechhhhcCCCCCCcHHHHHHHHhCHH-HH
Confidence 36788889999999999999999999999999999999999999999999999999999999999999999999987 99
Q ss_pred HHHhhcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHh
Q 022721 82 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLA 121 (293)
Q Consensus 82 ~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~ 121 (293)
.+++++|+.++ |+||+++||+|++++.+++.+...++++
T Consensus 155 ~~~~l~g~~~~-a~ea~~~Glv~~~~~~~~l~~~a~~~a~ 193 (195)
T cd06558 155 RELLLTGRRIS-AEEALELGLVDEVVPDEELLAAALELAR 193 (195)
T ss_pred HHHHHcCCccC-HHHHHHcCCCCeecChhHHHHHHHHHHh
Confidence 99999999999 9999999999999999888877766543
No 91
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=99.87 E-value=8.6e-22 Score=194.43 Aligned_cols=110 Identities=11% Similarity=0.097 Sum_probs=100.1
Q ss_pred HHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCC--eEEeCcccC-CCCCCCchHHHHHh--cCCCcHHHHHHHh
Q 022721 11 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--TLLAMPENG-IGLFPDVGFSYIAA--KGPGGGSVGAYLG 85 (293)
Q Consensus 11 l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~--a~f~~pe~~-lGl~p~~g~~~~l~--r~~G~~~~a~~l~ 85 (293)
+...+..+|||+||+|||+|+|||++|+++||+||++++ ++|++||++ +|++|++|+...++ +.+|.. ++++|+
T Consensus 111 i~~~i~~~pkPvIAAVnG~a~GGG~~LALacD~rvAs~~a~a~f~~pEv~~lGl~P~~gg~~~l~~~~~vg~~-~A~~ll 189 (546)
T TIGR03222 111 IEDSSRHSGLKFLAAVNGTCAGGGYELALACDEIMLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKRRVRRD-HADIFC 189 (546)
T ss_pred HHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccCcCCccchhhhccccchhCHH-HHHHHH
Confidence 455678899999999999999999999999999999986 799999997 99999999888887 688987 999999
Q ss_pred hcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHhc
Q 022721 86 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 122 (293)
Q Consensus 86 ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~~ 122 (293)
+||++++ |+||+++||+|++||++++.+.+.++++.
T Consensus 190 ltG~~i~-A~eA~~~GLV~~vv~~~~l~~~a~~lA~~ 225 (546)
T TIGR03222 190 TIEEGVR-GKRAKEWRLVDEVVKPSQFDAAIAERAAE 225 (546)
T ss_pred HcCCCcc-HHHHHHcCCceEEeChHHHHHHHHHHHHH
Confidence 9999999 99999999999999998888877665553
No 92
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=99.86 E-value=1.5e-21 Score=193.17 Aligned_cols=109 Identities=12% Similarity=0.132 Sum_probs=99.4
Q ss_pred HHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCC--eEEeCcccC-CCCCCCchHHHHHh--cCCCcHHHHHHHh
Q 022721 11 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--TLLAMPENG-IGLFPDVGFSYIAA--KGPGGGSVGAYLG 85 (293)
Q Consensus 11 l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~--a~f~~pe~~-lGl~p~~g~~~~l~--r~~G~~~~a~~l~ 85 (293)
+...+..+|||+||+|||+|+|||++|+++|||||++++ ++|++||++ +|++|++|++++++ +++|.. .+++|+
T Consensus 115 l~~~l~~~pkPvIAAVnG~a~GGG~~LALacD~rIas~~~~a~fg~pEv~~~Gl~P~~gg~~rl~~~~~vg~~-~A~~ll 193 (550)
T PRK08184 115 IEDSSRHSGLKFIAAVNGTCAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLPGTGGLTRVTDKRKVRRD-LADIFC 193 (550)
T ss_pred HHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccccCCCcchHHHhhhhhhcCHH-HHHHHH
Confidence 445678899999999999999999999999999999987 899999997 99999999888888 779987 999999
Q ss_pred hcCCCCCCHHHHHHcCccceeccCCChHHHHHHHHh
Q 022721 86 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLA 121 (293)
Q Consensus 86 ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~ 121 (293)
+||+.++ |+||+++||+|++||++++.+.+.+++.
T Consensus 194 ltG~~i~-AeeA~~~GLVd~vv~~d~l~~~a~~~A~ 228 (550)
T PRK08184 194 TIEEGVR-GKRAVDWRLVDEVVKPSKFDAKVAERAA 228 (550)
T ss_pred HhCCccc-HHHHHHcCCccEeeCHHHHHHHHHHHHH
Confidence 9999999 9999999999999998888887766544
No 93
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c
Probab=99.65 E-value=4.1e-16 Score=135.00 Aligned_cols=104 Identities=11% Similarity=-0.075 Sum_probs=88.8
Q ss_pred HHHHHHHHhCCCcEEEEEC---CccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCc--------------hHHHHH
Q 022721 9 YSLICKISEYKKPYISLMD---GVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDV--------------GFSYIA 71 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vn---G~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~--------------g~~~~l 71 (293)
..++.+|..+|||+||+++ |+|+|||+.|+++||+++++++++|+++++..|..+.. +....+
T Consensus 48 ~~i~~~l~~~~kPvia~v~~~~G~AasgG~~iala~D~iva~p~a~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (187)
T cd07020 48 REIVQAILASPVPVVVYVYPSGARAASAGTYILLAAHIAAMAPGTNIGAAHPVAIGGGGGSDPVMEKKILNDAVAYIRSL 127 (187)
T ss_pred HHHHHHHHhCCCCEEEEEecCCCCchhHHHHHHHhCCceeECCCCcEEeccccccCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 4567788999999999999 99999999999999999999999999999985544432 245567
Q ss_pred hcCCCc--HHHHHHHhhcCCCCCCHHHHHHcCccceeccCC-ChHH
Q 022721 72 AKGPGG--GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSG-NLGS 114 (293)
Q Consensus 72 ~r~~G~--~~~a~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~-~l~~ 114 (293)
++..|. . .+++++++|+.++ |+||+++||+|+++++. ++..
T Consensus 128 ~~~~G~~~~-~a~~~l~~g~~~~-a~eA~~~Glvd~v~~~~~~~~~ 171 (187)
T cd07020 128 AELRGRNAE-WAEKAVRESLSLT-AEEALKLGVIDLIAADLNELLK 171 (187)
T ss_pred HHHcCCCHH-HHHHHHHcCCeec-HHHHHHcCCcccccCCHHHHHH
Confidence 888886 4 8899999999999 99999999999999875 4443
No 94
>cd07014 S49_SppA Signal peptide peptidase A. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p
Probab=99.49 E-value=5.7e-14 Score=120.47 Aligned_cols=105 Identities=15% Similarity=-0.034 Sum_probs=84.8
Q ss_pred HHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHH--------HHhcCCC--
Q 022721 7 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSY--------IAAKGPG-- 76 (293)
Q Consensus 7 ~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~--------~l~r~~G-- 76 (293)
..++++..+.+++|||||++||.|.|+|+.|+++||++++++.+.|+++....+..+...... .+++..|
T Consensus 59 ~~~~~i~~~~~~~kpVia~v~G~a~g~g~~la~a~D~i~a~~~a~~~~~G~~~~~~~~~~~l~~~~~~~~~~v~~~rg~~ 138 (177)
T cd07014 59 VIRAELAAARAAGKPVVASGGGNAASGGYWISTPANYIVANPSTLVGSIGIFGVQLADQLSIENGYKRFITLVADNRHST 138 (177)
T ss_pred HHHHHHHHHHhCCCCEEEEECCchhHHHHHHHHhCCEEEECCCCeEEEechHhhHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 445677788889999999999999999999999999999999999999987766443322222 4444555
Q ss_pred cHHHHHHHhhcCCCCCCHHHHHHcCccceeccCCChH
Q 022721 77 GGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLG 113 (293)
Q Consensus 77 ~~~~a~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~ 113 (293)
.. ..++++..|..++ |++|++.||||.+.+.+++.
T Consensus 139 ~~-~~~~~l~~g~~~~-a~~A~~~GLVD~v~~~~e~~ 173 (177)
T cd07014 139 PE-QQIDKIAQGGVWT-GQDAKANGLVDSLGSFDDAV 173 (177)
T ss_pred HH-HhHHHhcCcCeEe-HHHHHHcCCcccCCCHHHHH
Confidence 44 6788899999999 99999999999999755443
No 95
>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a
Probab=99.33 E-value=6.3e-12 Score=105.95 Aligned_cols=98 Identities=12% Similarity=0.103 Sum_probs=79.8
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCch---------------HHHHHh
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVG---------------FSYIAA 72 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g---------------~~~~l~ 72 (293)
...+...|..++||+|++++|.|.|+|+.|+++||+|++++++.|+++....|..+... ....+.
T Consensus 47 ~~~i~~~i~~~~~pvi~~v~g~a~s~g~~ia~a~d~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~ 126 (160)
T cd07016 47 GLAIYNALKRHKGKVTVKIDGLAASAASVIAMAGDEVEMPPNAMLMIHNPSTGAAGNADDLRKAADLLDKIDESIANAYA 126 (160)
T ss_pred HHHHHHHHHhcCCCEEEEEcchHHhHHHHHHhcCCeEEECCCcEEEEECCccccCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678889999999999999999999999999999999999999999877766554432 122366
Q ss_pred cCCCcH-HHHHHHhhcCCCCCCHHHHHHcCcccee
Q 022721 73 KGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDY 106 (293)
Q Consensus 73 r~~G~~-~~a~~l~ltG~~l~~a~eA~~~Gl~~~~ 106 (293)
+..|.. .....++.++..++ ++||+++||+|++
T Consensus 127 ~~~g~~~~~i~~~~~~~~~l~-a~eA~~~GliD~v 160 (160)
T cd07016 127 EKTGLSEEEISALMDAETWLT-AQEAVELGFADEI 160 (160)
T ss_pred HHhCCCHHHHHHHHhCCeECc-HHHHHHcCCCCcC
Confidence 677742 26677777777899 9999999999975
No 96
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=98.94 E-value=5e-09 Score=88.10 Aligned_cols=98 Identities=15% Similarity=0.037 Sum_probs=73.2
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCc--h----HHHHH----hcC---
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDV--G----FSYIA----AKG--- 74 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~--g----~~~~l----~r~--- 74 (293)
...+...|..++||||+.++|.|.++|+.|+++||.|++++++.|++.....+..... . ....+ .+.
T Consensus 46 ~~~i~~~l~~~~kpvva~~~g~~~s~g~~la~~~d~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 125 (161)
T cd00394 46 GMNIVDALQASRKPVIAYVGGQAASAGYYIATAANKIVMAPGTRVGSHGPIGGYGGNGNPTAQEADQRIILYFIARFISL 125 (161)
T ss_pred HHHHHHHHHHhCCCEEEEECChhHHHHHHHHhCCCEEEECCCCEEEEeeeEEecCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 3456778889999999999999999999999999999999999999988876554321 0 00011 111
Q ss_pred ----CCcH-HHHHHHhhcCCCCCCHHHHHHcCcccee
Q 022721 75 ----PGGG-SVGAYLGMTGKRISTPSDALFAGLGTDY 106 (293)
Q Consensus 75 ----~G~~-~~a~~l~ltG~~l~~a~eA~~~Gl~~~~ 106 (293)
.|.. .....++.+|..++ +++|++.||||++
T Consensus 126 v~~~r~~~~~~~~~~~~~~~~~~-a~eA~~~GLvD~i 161 (161)
T cd00394 126 VAENRGQTTEKLEEDIEKDLVLT-AQEALEYGLVDAL 161 (161)
T ss_pred HHHhcCCCHHHHHHHhcCCcEEc-HHHHHHcCCcCcC
Confidence 1111 13456677889999 9999999999975
No 97
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=98.87 E-value=1.2e-08 Score=87.72 Aligned_cols=101 Identities=15% Similarity=0.099 Sum_probs=72.0
Q ss_pred HHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCc---h-HHH------HHhcCCC
Q 022721 7 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDV---G-FSY------IAAKGPG 76 (293)
Q Consensus 7 ~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~---g-~~~------~l~r~~G 76 (293)
....+...|..+++|+|++++|.|.++|+.++++||++++++++.|+.++.-.+...+. . .+. -+.+.-|
T Consensus 46 ~~~~I~~~l~~~~~pvva~V~g~AaSaG~~ia~a~d~i~m~p~a~iG~~~~v~~~~~~~~~~K~~~~~~~~~~~~A~~~g 125 (178)
T cd07021 46 SALEIVDLILNSPIPTIAYVNDRAASAGALIALAADEIYMAPGATIGAAEPIPGDGNGAADEKVQSYWRAKMRAAAEKKG 125 (178)
T ss_pred HHHHHHHHHHhCCCCEEEEECCchHHHHHHHHHhCCeEEECCCCeEecCeeEcCCCccchhHHHHHHHHHHHHHHHHHhC
Confidence 44567888999999999999999999999999999999999999999885543211100 0 011 1232334
Q ss_pred cHH-HHHHHhhcC-------------CCCCCHHHHHHcCccceecc
Q 022721 77 GGS-VGAYLGMTG-------------KRISTPSDALFAGLGTDYVP 108 (293)
Q Consensus 77 ~~~-~a~~l~ltG-------------~~l~~a~eA~~~Gl~~~~v~ 108 (293)
++. .+..|+-.. -.|+ ++||++.|++|.+++
T Consensus 126 r~~~~a~~mv~~~~~v~~~~~~~~~~l~lt-a~eA~~~g~~d~ia~ 170 (178)
T cd07021 126 RDPDIAEAMVDKDIEVPGVGIKGGELLTLT-ADEALKVGYAEGIAG 170 (178)
T ss_pred CCHHHHHHHhhhhcccccccccccceeeeC-HHHHHHhCCeEEEEC
Confidence 332 333333333 2699 999999999999986
No 98
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=98.87 E-value=3.8e-09 Score=106.18 Aligned_cols=106 Identities=18% Similarity=0.140 Sum_probs=81.1
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEE------eCcc------cCCCCCCCchHHHHHhc--
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLL------AMPE------NGIGLFPDVGFSYIAAK-- 73 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f------~~pe------~~lGl~p~~g~~~~l~r-- 73 (293)
.++.+.++...+||||+.++|.|.+||..++++||.++|++.+.+ +++. .++|+.|+...+..+..
T Consensus 367 i~~~i~~~~~~gKPVva~~~g~aaSggY~iA~aaD~I~a~p~t~~GSIGv~~~~~~~~~~l~klGi~~~~~~t~~~~~~s 446 (584)
T TIGR00705 367 IRRELARAQARGKPVIVSMGAMAASGGYWIASAADYIVASPNTITGSIGVFSVLPTFENSLDRIGVHVDGVSTHELANVS 446 (584)
T ss_pred HHHHHHHHHhCCCcEEEEECCccccHHHHHHHhCCEEEECCCCeeecCEEEEEccCHHHHHHhcCCceEEEeccCcCCCC
Confidence 344555666778999999999999999999999999999999987 6653 58999987665543332
Q ss_pred --------------------------CCCcH----HHHHHHhhcCCCCCCHHHHHHcCccceeccCCChHHHHH
Q 022721 74 --------------------------GPGGG----SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKE 117 (293)
Q Consensus 74 --------------------------~~G~~----~~a~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~ 117 (293)
.++.+ .-..+.+++|+.++ |++|+++||||++- .+++...
T Consensus 447 ~~~~~t~~~~~~~~~~l~~~y~~F~~~Va~~R~l~~e~v~~ia~Grv~t-g~eA~~~GLVD~ig---~~~~Ai~ 516 (584)
T TIGR00705 447 LLRPLTAEDQAIMQLSVEAGYRRFLSVVSAGRNLTPTQVDKVAQGRVWT-GEDAVSNGLVDALG---GLDEAVA 516 (584)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHhCCCcC-HHHHHHcCCcccCC---CHHHHHH
Confidence 22222 12677889999999 99999999999994 4555443
No 99
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te
Probab=98.79 E-value=8.1e-09 Score=91.06 Aligned_cols=47 Identities=19% Similarity=0.176 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEe
Q 022721 7 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 53 (293)
Q Consensus 7 ~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~ 53 (293)
..++.+..+..++||+||+++|.|.|+|+.|+++||++++++++.++
T Consensus 58 ~~~~~l~~~~~~~kpVia~v~g~a~s~gy~la~~aD~i~a~~~a~~g 104 (211)
T cd07019 58 VIRAELAAARAAGKPVVVSAGGAAASGGYWISTPANYIVANPSTLTG 104 (211)
T ss_pred HHHHHHHHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEcCCCEEE
Confidence 34556677888999999999999999999999999999999998886
No 100
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.
Probab=98.62 E-value=1.4e-07 Score=83.38 Aligned_cols=45 Identities=18% Similarity=0.245 Sum_probs=38.9
Q ss_pred HHHHHHHhCC--CcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeC
Q 022721 10 SLICKISEYK--KPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 54 (293)
Q Consensus 10 ~l~~~i~~~~--kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~ 54 (293)
.+...+..++ |||||+++|.|.|+|+.|+++||+++|++.+.|+.
T Consensus 62 ~l~~~l~~~~~~KpViA~v~g~a~s~gy~lA~~aD~i~a~~~a~~g~ 108 (214)
T cd07022 62 ELADAIRAARAGKPIVAFVNGLAASAAYWIASAADRIVVTPTAGVGS 108 (214)
T ss_pred HHHHHHHHHhcCCCEEEEECCchhhHHHHHHhcCCEEEEcCCCeEEe
Confidence 3445555565 99999999999999999999999999999999754
No 101
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.
Probab=98.55 E-value=5.3e-07 Score=79.30 Aligned_cols=48 Identities=23% Similarity=0.238 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhCC--CcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeC
Q 022721 7 AEYSLICKISEYK--KPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 54 (293)
Q Consensus 7 ~~~~l~~~i~~~~--kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~ 54 (293)
...++..+|..++ ||+||+++|.|.|+|+.|+++||.+++++++.++.
T Consensus 47 ~~~~l~~~i~~~~~~kpvia~v~g~a~s~g~~la~aaD~i~a~p~a~vg~ 96 (207)
T TIGR00706 47 ASEEIYEKLKKLKAKKPVVASMGGVAASGGYYIAMAADEIVANPGTITGS 96 (207)
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCccchHHHHHHhcCCEEEECCCCeEEe
Confidence 3456777888887 99999999999999999999999999999988765
No 102
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=98.49 E-value=7.2e-07 Score=78.38 Aligned_cols=47 Identities=21% Similarity=0.250 Sum_probs=42.1
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeC
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 54 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~ 54 (293)
.++.+..+..++||+||+++|.|.|+|+.|+++||.+++++.+.|+.
T Consensus 55 i~~~i~~~~~~~kpvia~v~g~~~s~g~~lA~aaD~i~a~~~s~~g~ 101 (208)
T cd07023 55 IYREIRRLRKAKKPVVASMGDVAASGGYYIAAAADKIVANPTTITGS 101 (208)
T ss_pred HHHHHHHHHhcCCcEEEEECCcchhHHHHHHhhCCEEEECCCCeEEe
Confidence 45566778888999999999999999999999999999999998854
No 103
>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional
Probab=98.29 E-value=1.7e-05 Score=71.98 Aligned_cols=92 Identities=22% Similarity=0.218 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHh
Q 022721 6 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 85 (293)
Q Consensus 6 ~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ 85 (293)
+...++...+...+.|+|+++-|.|.|||......||++++.+++.++ +.++-|++..+.+-......+.+.+
T Consensus 123 ~~ia~~~~~~s~~~VP~IsVI~G~~~gGgA~a~~~~D~v~m~~~a~~~-------v~~pe~~a~il~~~~~~a~~aa~~~ 195 (256)
T PRK12319 123 EAIARNLMEMSDLKVPIIAIIIGEGGSGGALALAVADQVWMLENTMYA-------VLSPEGFASILWKDGSRATEAAELM 195 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEEEeCCcCcHHHHHhhcCCEEEEecCceEE-------EcCHHHHHHHHhcCcccHHHHHHHc
Confidence 445667778889999999999999999988888899999999988874 4544444545544322212333333
Q ss_pred hcCCCCCCHHHHHHcCccceeccC
Q 022721 86 MTGKRISTPSDALFAGLGTDYVPS 109 (293)
Q Consensus 86 ltG~~l~~a~eA~~~Gl~~~~v~~ 109 (293)
+++ +.++.+.|++|.+|+.
T Consensus 196 ----~~~-a~~l~~~g~iD~ii~e 214 (256)
T PRK12319 196 ----KIT-AGELLEMGVVDKVIPE 214 (256)
T ss_pred ----CCC-HHHHHHCCCCcEecCC
Confidence 778 9999999999999975
No 104
>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle
Probab=98.19 E-value=1.2e-05 Score=68.71 Aligned_cols=101 Identities=15% Similarity=0.130 Sum_probs=75.0
Q ss_pred HHHHHHHHHhCCCcEEEEEC---CccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCC-------Cch-HHHH------
Q 022721 8 EYSLICKISEYKKPYISLMD---GVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFP-------DVG-FSYI------ 70 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vn---G~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p-------~~g-~~~~------ 70 (293)
...+...|...++||++.++ |.|..+|..++++||.+++.+++.++......|..+ +.. .+..
T Consensus 47 ~~~I~~~i~~~~~pvv~~v~p~g~~AaSag~~I~~a~~~i~m~p~s~iG~~~pi~~~g~~~~~~~~~~ki~~~~~~~~r~ 126 (172)
T cd07015 47 AGNIVQRIQQSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITNYFIAYIKS 126 (172)
T ss_pred HHHHHHHHHhcCcCEEEEEecCCCeehhHHHHHHHhcCceEECCCCEEEEccccccCCCCCccccchHHHHHHHHHHHHH
Confidence 34567778889999999999 999999999999999999999999999887544322 100 1111
Q ss_pred HhcCCCcH-HHHHHHhhcCCCCCCHHHHHHcCccceeccC
Q 022721 71 AAKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPS 109 (293)
Q Consensus 71 l~r~~G~~-~~a~~l~ltG~~l~~a~eA~~~Gl~~~~v~~ 109 (293)
+.+.-|++ ..+..++-....++ ++||+++|++|.++++
T Consensus 127 ~A~~~Gr~~~~a~~~v~~~~~lt-a~EA~~~G~iD~ia~~ 165 (172)
T cd07015 127 LAQESGRNATIAEEFITKDLSLT-PEEALKYGVIEVVARD 165 (172)
T ss_pred HHHHHCcCHHHHHHHHHhhcCcC-HHHHHHcCCceeeeCC
Confidence 12223321 25566666678899 9999999999999874
No 105
>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.17 E-value=5.4e-06 Score=72.62 Aligned_cols=100 Identities=13% Similarity=0.030 Sum_probs=63.9
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcC--eEEEeCCeEEeCcccCCCCCCCchH---------------HHHH
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGF---------------SYIA 71 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D--~riate~a~f~~pe~~lGl~p~~g~---------------~~~l 71 (293)
..+...|...+.|+++.+.|.|.++|..|+++++ .|++.+++++.+....-|......- ...+
T Consensus 79 ~~I~d~i~~~~~~v~t~~~G~aaS~a~~I~~ag~~~~r~~~p~s~imih~p~~~~~G~a~di~~~a~~l~~~~~~~~~~~ 158 (200)
T PRK00277 79 LAIYDTMQFIKPDVSTICIGQAASMGAFLLAAGAKGKRFALPNSRIMIHQPLGGFQGQATDIEIHAREILKLKKRLNEIL 158 (200)
T ss_pred HHHHHHHHhcCCCEEEEEEeEeccHHHHHHhcCCCCCEEEcCCceEEeccCcccccCChhHHHHHHHHHHHHHHHHHHHH
Confidence 4567778888999999999999999999888743 4666666666554433221100000 0112
Q ss_pred hcCCCcH-HHHHHHhhcCCCCCCHHHHHHcCccceeccC
Q 022721 72 AKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPS 109 (293)
Q Consensus 72 ~r~~G~~-~~a~~l~ltG~~l~~a~eA~~~Gl~~~~v~~ 109 (293)
....|.. .....++-.+..++ |+||+++||+|+++.+
T Consensus 159 a~~tg~~~~~i~~~~~~~~~ls-a~EA~e~GliD~Ii~~ 196 (200)
T PRK00277 159 AEHTGQPLEKIEKDTDRDNFMS-AEEAKEYGLIDEVLTK 196 (200)
T ss_pred HHHHCcCHHHHHHHhhCCcccc-HHHHHHcCCccEEeec
Confidence 2223321 13333444566788 9999999999999964
No 106
>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=98.01 E-value=0.00011 Score=68.50 Aligned_cols=92 Identities=17% Similarity=0.113 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHh
Q 022721 6 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 85 (293)
Q Consensus 6 ~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ 85 (293)
+...++...+.....|+|++|-|.|.|||+.....||++++.+++.+ +..++-|++..+.+-.. .+...+
T Consensus 176 ~aia~~l~a~s~~~VP~IsVViGeggsGGAla~~~aD~v~m~~~a~~-------sVisPEg~a~Il~kd~~---~a~~aa 245 (316)
T TIGR00513 176 EAIARNLREMARLGVPVICTVIGEGGSGGALAIGVGDKVNMLEYSTY-------SVISPEGCAAILWKDAS---KAPKAA 245 (316)
T ss_pred HHHHHHHHHHHcCCCCEEEEEecccccHHHhhhccCCEEEEecCceE-------EecCHHHHHHHhccchh---hHHHHH
Confidence 34556777788999999999999998887765556999999988887 45555455555554322 222222
Q ss_pred hcCCCCCCHHHHHHcCccceeccC
Q 022721 86 MTGKRISTPSDALFAGLGTDYVPS 109 (293)
Q Consensus 86 ltG~~l~~a~eA~~~Gl~~~~v~~ 109 (293)
.-.+++ +.++.+.|++|.+||.
T Consensus 246 -e~~~~t-a~~l~~~G~iD~II~e 267 (316)
T TIGR00513 246 -EAMKIT-APDLKELGLIDSIIPE 267 (316)
T ss_pred -HHccCC-HHHHHHCCCCeEeccC
Confidence 136778 9999999999999974
No 107
>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated
Probab=98.00 E-value=0.00012 Score=68.17 Aligned_cols=92 Identities=17% Similarity=0.146 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHh
Q 022721 6 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 85 (293)
Q Consensus 6 ~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ 85 (293)
+...++...+.....|+|++|-|.+.|||+.....||++++.+++.+ +..++-|++..+.+-.. .+...+
T Consensus 176 ~aia~~l~~~a~~~VP~IsVIiGeg~sGGAla~~~aD~v~m~~~A~~-------svisPEg~a~Il~~~~~---~a~~aa 245 (319)
T PRK05724 176 EAIARNLREMARLKVPIICTVIGEGGSGGALAIGVGDRVLMLEYSTY-------SVISPEGCASILWKDAS---KAPEAA 245 (319)
T ss_pred HHHHHHHHHHhCCCCCEEEEEeCCccHHHHHHHhccCeeeeecCceE-------eecCHHHHHHHHhcCch---hHHHHH
Confidence 44567788889999999999999998888766666999999888877 56655555556665432 333333
Q ss_pred hcCCCCCCHHHHHHcCccceeccC
Q 022721 86 MTGKRISTPSDALFAGLGTDYVPS 109 (293)
Q Consensus 86 ltG~~l~~a~eA~~~Gl~~~~v~~ 109 (293)
- ...++ +.++.+.|++|.+|+.
T Consensus 246 e-~~~it-a~~l~~~g~iD~II~E 267 (319)
T PRK05724 246 E-AMKIT-AQDLKELGIIDEIIPE 267 (319)
T ss_pred H-HcCCC-HHHHHHCCCceEeccC
Confidence 3 56789 9999999999999974
No 108
>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional
Probab=97.98 E-value=0.00012 Score=68.11 Aligned_cols=91 Identities=15% Similarity=0.110 Sum_probs=68.4
Q ss_pred HHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhh
Q 022721 7 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM 86 (293)
Q Consensus 7 ~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~l 86 (293)
...++...+.....|+|++|-|.+.|||+.....||++++.+++.++ +.++-|++..|.+-.. .+.+ +.
T Consensus 180 aiar~l~~~a~~~VP~IsVViGeggsGGAlal~~aD~V~m~e~a~~s-------VisPEg~a~Il~~d~~---~a~~-aA 248 (322)
T CHL00198 180 AIAVNLREMFSFEVPIICTIIGEGGSGGALGIGIGDSIMMLEYAVYT-------VATPEACAAILWKDSK---KSLD-AA 248 (322)
T ss_pred HHHHHHHHHHcCCCCEEEEEeCcccHHHHHhhhcCCeEEEeCCeEEE-------ecCHHHHHHHHhcchh---hHHH-HH
Confidence 34556677889999999999999988887666669999999999885 4544455545655332 3333 34
Q ss_pred cCCCCCCHHHHHHcCccceeccC
Q 022721 87 TGKRISTPSDALFAGLGTDYVPS 109 (293)
Q Consensus 87 tG~~l~~a~eA~~~Gl~~~~v~~ 109 (293)
..-+++ |+++++.|++|.+||.
T Consensus 249 ~~~~it-a~dL~~~giiD~ii~E 270 (322)
T CHL00198 249 EALKIT-SEDLKVLGIIDEIIPE 270 (322)
T ss_pred HHcCCC-HHHHHhCCCCeEeccC
Confidence 456889 9999999999999974
No 109
>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional
Probab=97.97 E-value=0.00022 Score=68.33 Aligned_cols=91 Identities=18% Similarity=0.150 Sum_probs=66.0
Q ss_pred HHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhh
Q 022721 7 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM 86 (293)
Q Consensus 7 ~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~l 86 (293)
...+++..+.....|+|++|-|.+.+||+.....||++++.+++.+ ++.++-|++..|.+-......+.
T Consensus 247 aIAr~l~ams~l~VPiISVViGeGgSGGAlalg~aD~VlMle~A~y-------sVisPEgaAsILwkd~~~A~eAA---- 315 (431)
T PLN03230 247 AIAFNLREMFGLRVPIIATVIGEGGSGGALAIGCGNRMLMMENAVY-------YVASPEACAAILWKSAAAAPKAA---- 315 (431)
T ss_pred HHHHHHHHHhcCCCCEEEEEeCCCCcHHHHHhhcCCEEEEecCCEE-------EecCHHHHHHHHhccccchHHHH----
Confidence 4456777888999999999999996666555556899999998877 45544455545554332111333
Q ss_pred cCCCCCCHHHHHHcCccceeccC
Q 022721 87 TGKRISTPSDALFAGLGTDYVPS 109 (293)
Q Consensus 87 tG~~l~~a~eA~~~Gl~~~~v~~ 109 (293)
....++ +.++.+.|+||.+|+.
T Consensus 316 ealkit-A~dL~~~GiID~II~E 337 (431)
T PLN03230 316 EALRIT-AAELVKLGVVDEIVPE 337 (431)
T ss_pred HHcCCC-HHHHHhCCCCeEeccC
Confidence 344899 9999999999999974
No 110
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=97.91 E-value=4.9e-05 Score=67.49 Aligned_cols=48 Identities=10% Similarity=0.045 Sum_probs=41.5
Q ss_pred HHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCc
Q 022721 7 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 55 (293)
Q Consensus 7 ~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~p 55 (293)
..++.+..+...+|||||.++| +.+||..|+++||.+++.+.+.|+..
T Consensus 66 el~~~i~~~~~~~kpVia~~~~-~~sggy~lasaad~I~a~p~~~vg~i 113 (222)
T cd07018 66 ELRQALERFRASGKPVIAYADG-YSQGQYYLASAADEIYLNPSGSVELT 113 (222)
T ss_pred HHHHHHHHHHHhCCeEEEEeCC-CCchhhhhhhhCCEEEECCCceEEee
Confidence 3455666677789999999998 78999999999999999999999884
No 111
>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas
Probab=97.91 E-value=7.8e-05 Score=63.09 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=65.4
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcC--eEEEeCCeEEeCcccCCCCCCCch-HH--------------HHH
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVG-FS--------------YIA 71 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D--~riate~a~f~~pe~~lGl~p~~g-~~--------------~~l 71 (293)
..+...|..+++|+++.+.|.|.++|..++++|| .|++.+++++.+....-|...... .. ..+
T Consensus 48 ~~i~~~i~~~~~~v~~~~~g~aaS~~~~i~~a~~~g~r~~~p~a~~~ih~~~~~~~g~~~d~~~~~~~l~~~~~~~~~~~ 127 (162)
T cd07013 48 MAIYDTIKFIKADVVTIIDGLAASMGSVIAMAGAKGKRFILPNAMMMIHQPWGGTLGDATDMRIYADLLLKVEGNLVSAY 127 (162)
T ss_pred HHHHHHHHhcCCCceEEEEeehhhHHHHHHHcCCCCcEEEecCEEEEEccCcccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788889999999999999999999999999 688888888876554322221100 00 011
Q ss_pred hcCCCcH-HHHHHHhhcCCCCCCHHHHHHcCcccee
Q 022721 72 AKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDY 106 (293)
Q Consensus 72 ~r~~G~~-~~a~~l~ltG~~l~~a~eA~~~Gl~~~~ 106 (293)
.+..|.. ..-..++-.+..++ |+||+++||+|++
T Consensus 128 a~~tg~~~~~i~~~~~~~~~~s-a~eA~~~GliD~i 162 (162)
T cd07013 128 AHKTGQSEEELHADLERDTWLS-AREAVEYGFADTI 162 (162)
T ss_pred HHHhCcCHHHHHHHHcCCcccc-HHHHHHcCCCCcC
Confidence 1222311 12333444556678 9999999999974
No 112
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Probab=97.89 E-value=0.00025 Score=71.90 Aligned_cols=92 Identities=14% Similarity=0.089 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHh
Q 022721 6 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 85 (293)
Q Consensus 6 ~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ 85 (293)
+...++...+.....|+|++|-|.|.|||+.....||++++.+++.+ ++.++-|++..+.+-.. .+. -+
T Consensus 267 ~aIArnl~amasl~VP~ISVViGeggSGGAlA~g~aD~VlMle~A~~-------sVisPEgaAsILwkd~~---~A~-eA 335 (762)
T PLN03229 267 EAIAHNLRTMFGLKVPIVSIVIGEGGSGGALAIGCANKLLMLENAVF-------YVASPEACAAILWKSAK---AAP-KA 335 (762)
T ss_pred HHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhcCCEEEEecCCeE-------EecCHHHHHHHHhcCcc---cHH-HH
Confidence 34556777888999999999999998888887778999999988876 45555455556655432 222 24
Q ss_pred hcCCCCCCHHHHHHcCccceeccC
Q 022721 86 MTGKRISTPSDALFAGLGTDYVPS 109 (293)
Q Consensus 86 ltG~~l~~a~eA~~~Gl~~~~v~~ 109 (293)
...-.++ |++++++|+||.+||.
T Consensus 336 Ae~lkiT-a~dL~~lGiiD~IIpE 358 (762)
T PLN03229 336 AEKLRIT-AQELCRLQIADGIIPE 358 (762)
T ss_pred HHHcCCC-HHHHHhCCCCeeeccC
Confidence 4556889 9999999999999974
No 113
>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=97.86 E-value=0.00012 Score=64.56 Aligned_cols=101 Identities=14% Similarity=0.082 Sum_probs=72.9
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcC--eEEEeCCeEEeCcccCC-CCCCCchH----------------H
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGI-GLFPDVGF----------------S 68 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D--~riate~a~f~~pe~~l-Gl~p~~g~----------------~ 68 (293)
-..++..|..++.|+++.+.|.|.+.|..++++|| .|++.+++.|.+....+ |..-+... .
T Consensus 82 g~~I~d~i~~~~~~v~t~~~G~aaSaa~lI~~ag~~~~R~~~p~s~imiH~p~~~~~~~G~a~d~~~~~~~l~~~~~~~~ 161 (207)
T PRK12553 82 GDAIYDTIQFIRPDVQTVCTGQAASAGAVLLAAGTPGKRFALPNARILIHQPSLGGGIRGQASDLEIQAREILRMRERLE 161 (207)
T ss_pred HHHHHHHHHhcCCCcEEEEEeehhhHHHHHHHcCCcCcEEECCCchhhhcCccccCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 34577888889999999999999999999999998 59999999999877654 21111000 1
Q ss_pred HHHhcCCCcH-HHHHHHhhcCCCCCCHHHHHHcCccceeccC
Q 022721 69 YIAAKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPS 109 (293)
Q Consensus 69 ~~l~r~~G~~-~~a~~l~ltG~~l~~a~eA~~~Gl~~~~v~~ 109 (293)
..+.+..|.. .....++-.+..++ |+||+++||+|+++++
T Consensus 162 ~~ya~~tg~~~e~i~~~~~~~~~lt-a~EA~e~GliD~I~~~ 202 (207)
T PRK12553 162 RILAEHTGQSVEKIRKDTDRDKWLT-AEEAKDYGLVDQIITS 202 (207)
T ss_pred HHHHHHhCCCHHHHHHHHhcCcccc-HHHHHHcCCccEEcCc
Confidence 1233333422 13444555678899 9999999999999864
No 114
>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.84 E-value=0.00017 Score=63.03 Aligned_cols=100 Identities=15% Similarity=0.014 Sum_probs=69.8
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCe--EEEeCCeEEeCcccCCCCCCCchH---------------HHHH
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGF---------------SYIA 71 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~--riate~a~f~~pe~~lGl~p~~g~---------------~~~l 71 (293)
..+...|..++.||++.+.|.|.+.|..++++||- |++.++++|.+....-|+.....- ...+
T Consensus 71 ~aI~d~i~~~~~~V~t~v~G~AaSaaslIl~ag~~~~R~~~p~s~imiHqP~~~~~G~a~di~~~a~~l~~~~~~i~~~~ 150 (197)
T PRK14512 71 FAIFNMIRFVKPKVFTIGVGLVASAAALIFLAAKKESRFSLPNARYLLHQPLSGFKGVATDIEIYANELNKVKSELNDII 150 (197)
T ss_pred HHHHHHHHhCCCCEEEEEEeeeHhHHHHHHhcCCcCceeECCCCcEEEEcCccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888899999999999999999999999985 999999999876654333221110 0011
Q ss_pred hcCCCcH-HHHHHHhhcCCCCCCHHHHHHcCccceeccC
Q 022721 72 AKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPS 109 (293)
Q Consensus 72 ~r~~G~~-~~a~~l~ltG~~l~~a~eA~~~Gl~~~~v~~ 109 (293)
....|.. .....++-....++ |+||+++||+|+++++
T Consensus 151 a~~tg~~~~~i~~~~~~d~~lt-a~EA~~yGliD~I~~~ 188 (197)
T PRK14512 151 AKETGQELDKVEKDTDRDFWLD-SSSAVKYGLVFEVVET 188 (197)
T ss_pred HHHhCcCHHHHHHhhhcCcccC-HHHHHHcCCccEeecC
Confidence 1122211 12333334456788 9999999999999974
No 115
>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ
Probab=97.72 E-value=0.00011 Score=62.75 Aligned_cols=97 Identities=15% Similarity=0.063 Sum_probs=70.1
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcC--eEEEeCCeEEeCcccCCCCCCCchH---------------HHHH
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGF---------------SYIA 71 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D--~riate~a~f~~pe~~lGl~p~~g~---------------~~~l 71 (293)
..+...|..++.|+++.+.|.|.++|..+++++| -|++.+++.|.+.+...+..-...- ...+
T Consensus 57 ~~i~~~l~~~~~~v~t~~~g~aaS~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~ 136 (171)
T cd07017 57 LAIYDTMQYIKPPVSTICLGLAASMGALLLAAGTKGKRYALPNSRIMIHQPLGGAGGQASDIEIQAKEILRLRRRLNEIL 136 (171)
T ss_pred HHHHHHHHhcCCCEEEEEEeEehhHHHHHHHcCCCCCEEEccchHHHHcCCCccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778888999999999999999999999999 7999999999998877665432110 1111
Q ss_pred hcCCCcH-HHHHHHhhcCCCCCCHHHHHHcCcccee
Q 022721 72 AKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDY 106 (293)
Q Consensus 72 ~r~~G~~-~~a~~l~ltG~~l~~a~eA~~~Gl~~~~ 106 (293)
....|.. ..-..++-.+.-++ ++||+++||+|++
T Consensus 137 ~~~tg~~~~~i~~~~~~~~~lt-a~EA~e~GiiD~V 171 (171)
T cd07017 137 AKHTGQPLEKIEKDTDRDRYMS-AEEAKEYGLIDKI 171 (171)
T ss_pred HHHhCCCHHHHHHHhhCCcccc-HHHHHHcCCCccC
Confidence 2222322 13334444677788 9999999999975
No 116
>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A ....
Probab=97.72 E-value=7.6e-05 Score=64.07 Aligned_cols=101 Identities=16% Similarity=0.075 Sum_probs=69.5
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCe--EEEeCCeEEeCcccCCCCCCCchHHH----HHhc--------
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFSY----IAAK-------- 73 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~--riate~a~f~~pe~~lGl~p~~g~~~----~l~r-------- 73 (293)
-..+...|..++.|+++.+.|.|.+.|..++++|+. |++.+++.|.+.+...+......... .+.+
T Consensus 63 g~~i~~~i~~~~~~v~t~~~G~aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~~~g~~~~l~~~~~~l~~~~~~~~~~ 142 (182)
T PF00574_consen 63 GLAIYDAIRSSKAPVTTVVLGLAASAATLIFLAGDKGKRYASPNSRFMIHQPSTGSGGNASELREQAKELEKLNERIANI 142 (182)
T ss_dssp HHHHHHHHHHSSSEEEEEEEEEEETHHHHHHHTSSTTTEEE-TT-EEEES-CEEEEEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEEeCccccceehhhhcCCcCceeeeecCEEEeecceeecccccchhHHHHHHHHHHHHHHHHH
Confidence 456788899999999999999999999999999999 89999999999888766543111110 1111
Q ss_pred ---CCCcH-HHHHHHhhcCCCCCCHHHHHHcCccceeccC
Q 022721 74 ---GPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPS 109 (293)
Q Consensus 74 ---~~G~~-~~a~~l~ltG~~l~~a~eA~~~Gl~~~~v~~ 109 (293)
..|.. ..-..++-...-++ ++||+++||+|+++.+
T Consensus 143 ~~~~tg~~~~~i~~~~~~~~~l~-a~EA~~~GiiD~I~~~ 181 (182)
T PF00574_consen 143 YAERTGLSKEEIEELMDRDTWLS-AEEALEYGIIDEIIES 181 (182)
T ss_dssp HHHHHTS-HHHHHHHCSSTEEEE-HHHHHHHTSSSEEESS
T ss_pred HHHHhCCcHHHHHHHHhCCcccc-HHHHHHcCCCCEeccC
Confidence 11211 02223333445578 9999999999999853
No 117
>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit
Probab=97.67 E-value=0.00035 Score=61.22 Aligned_cols=102 Identities=11% Similarity=0.024 Sum_probs=72.0
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcC--eEEEeCCeEEeCcccCCCCCCCchH----------------HH
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGF----------------SY 69 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D--~riate~a~f~~pe~~lGl~p~~g~----------------~~ 69 (293)
-..++..|...+.||.+.+.|.|.+.|..|++++| -|++.++++|.+.....|+.-+... ..
T Consensus 77 g~aIyd~m~~~~~~V~Tv~~G~AaS~aslIl~aG~kg~R~~~p~s~imiHqp~~~~~~G~a~di~~~a~~l~~~~~~~~~ 156 (200)
T CHL00028 77 GLAIYDTMQFVKPDVHTICLGLAASMASFILAGGEITKRLAFPHARVMIHQPASSFYEGQASEFVLEAEELLKLRETITR 156 (200)
T ss_pred HHHHHHHHHhcCCCEEEEEEEehHHHHHHHHhCCCCCCEEecCCCeEEEecCccCcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34577889999999999999999999999999998 5999999999998876663211111 01
Q ss_pred HHhcCCCcH-HHHHHHhhcCCCCCCHHHHHHcCccceeccCC
Q 022721 70 IAAKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPSG 110 (293)
Q Consensus 70 ~l~r~~G~~-~~a~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~ 110 (293)
.++...|.. ..-..++-....++ |+||+++||+|+++.+.
T Consensus 157 ~ya~~Tg~~~e~i~~~~~r~~~lt-a~EA~eyGliD~I~~~~ 197 (200)
T CHL00028 157 VYAQRTGKPLWVISEDMERDVFMS-ATEAKAYGIVDLVAVNN 197 (200)
T ss_pred HHHHHHCcCHHHHHHHhhcCccCC-HHHHHHcCCCcEEeecC
Confidence 111122211 12233333445688 99999999999998654
No 118
>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.56 E-value=0.00034 Score=62.08 Aligned_cols=100 Identities=9% Similarity=-0.020 Sum_probs=70.7
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCe--EEEeCCeEEeCcccCCCCCCCchH----HH-----------HH
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGF----SY-----------IA 71 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~--riate~a~f~~pe~~lGl~p~~g~----~~-----------~l 71 (293)
..++..|...+.||.+.+.|.|.+.|..|++++|. |++.++++|.+....-|......- .. .+
T Consensus 102 laIyd~m~~~~~~V~tv~~G~AAS~AslIl~aG~~gkR~~~pna~iMiHqP~~~~~G~a~di~i~a~el~~~~~~i~~iy 181 (221)
T PRK14514 102 LGIYDTMQFISSDVATICTGMAASMASVLLVAGTKGKRSALPHSRVMIHQPLGGAQGQASDIEITAREIQKLKKELYTII 181 (221)
T ss_pred HHHHHHHHhcCCCEEEEEEEEehhHHHHHHhcCCCCceeeCCCCEEEeccCCcccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 45677888999999999999999999999999996 999999999988776544322110 00 11
Q ss_pred hcCCCcH-HHHHHHhhcCCCCCCHHHHHHcCccceeccC
Q 022721 72 AKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPS 109 (293)
Q Consensus 72 ~r~~G~~-~~a~~l~ltG~~l~~a~eA~~~Gl~~~~v~~ 109 (293)
.+..|.. ..-...+-....++ |+||+++||+|++++.
T Consensus 182 a~~TG~~~e~I~~~~~rd~wmt-A~EA~eyGliD~Vi~~ 219 (221)
T PRK14514 182 ADHSGTPFDKVWADSDRDYWMT-AQEAKEYGMIDEVLIK 219 (221)
T ss_pred HHHHCcCHHHHHHHhhcCccCC-HHHHHHcCCccEEeec
Confidence 1222321 12223333456688 9999999999999864
No 119
>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP. This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model.
Probab=97.54 E-value=0.00056 Score=59.47 Aligned_cols=99 Identities=13% Similarity=-0.000 Sum_probs=68.4
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcC--eEEEeCCeEEeCcccCCCCCCCchHH---------------HHH
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGFS---------------YIA 71 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D--~riate~a~f~~pe~~lGl~p~~g~~---------------~~l 71 (293)
..+...|..++.|+...+.|.|.+.|..++++++ .|++.++++|.+.+..-|......-. ..+
T Consensus 74 ~~I~d~l~~~~~~v~t~~~G~AaSaaslI~~aG~~~~r~~~p~s~imiH~p~~~~~G~a~d~~~~a~~l~~~~~~~~~~y 153 (191)
T TIGR00493 74 LAIYDTMQFIKPDVSTICIGQAASMGAFLLSAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQANEILRLKGLLNDIL 153 (191)
T ss_pred HHHHHHHHhcCCCEEEEEEEeeccHHHHHHhcCCCCcEEecCCceEEEecCcccccCCcchhHHHHHHHHHHHHHHHHHH
Confidence 4566778888888999999999999988888765 69999999999977654432211111 112
Q ss_pred hcCCCcH-HHHHHHhhcCCCCCCHHHHHHcCccceecc
Q 022721 72 AKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVP 108 (293)
Q Consensus 72 ~r~~G~~-~~a~~l~ltG~~l~~a~eA~~~Gl~~~~v~ 108 (293)
.+..|.. .....++-.+..++ |+||+++||+|+++.
T Consensus 154 a~~tg~~~~~i~~~~~~~~~lt-a~EA~~~GliD~ii~ 190 (191)
T TIGR00493 154 ANHTGQSLEQIEKDTERDFFMS-AEEAKEYGLIDSVLT 190 (191)
T ss_pred HHHHCcCHHHHHHHhhCCccCc-HHHHHHcCCccEEec
Confidence 2222321 13344444567788 999999999999975
No 120
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit. Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.
Probab=97.45 E-value=0.0013 Score=60.21 Aligned_cols=84 Identities=17% Similarity=0.178 Sum_probs=57.1
Q ss_pred HHHhCCCcEEEEECCc--cchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcH-HHHHHHhhcCCC
Q 022721 14 KISEYKKPYISLMDGV--TMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG-SVGAYLGMTGKR 90 (293)
Q Consensus 14 ~i~~~~kPvIa~vnG~--a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~-~~a~~l~ltG~~ 90 (293)
.+... .|+|+++-|+ |.||+..++..||++|+++++++++.- |. ......|.. --..+..|.-+.
T Consensus 132 ~ls~~-vP~Isvv~Gp~gc~GG~a~~a~l~D~vim~~~a~i~~aG------P~-----VIe~~~G~e~~~~~d~~l~~~~ 199 (274)
T TIGR03133 132 DARAA-VPVIGVIGGRVGCFGGMGIAAGLCSYLIMTEEGRLGLSG------PE-----VIEQEAGVEEFDSRDRALVWRT 199 (274)
T ss_pred HHhCC-CCEEEEEeCCCCcchHHHHHHhcCCEEEEeCCcEEeccC------HH-----HHHHhcCCCccCHHHhcccccc
Confidence 34444 9999999999 899999999999999999888775411 22 122222310 012233444455
Q ss_pred CCCHHHHHHcCccceeccCC
Q 022721 91 ISTPSDALFAGLGTDYVPSG 110 (293)
Q Consensus 91 l~~a~eA~~~Gl~~~~v~~~ 110 (293)
+. +......|++|.+++++
T Consensus 200 lG-G~~~~~sG~~D~~v~dd 218 (274)
T TIGR03133 200 TG-GKHRFLSGDADVLVEDD 218 (274)
T ss_pred cc-hHhHhhcccceEEeCCH
Confidence 66 67788899999999864
No 121
>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.42 E-value=0.0011 Score=58.20 Aligned_cols=103 Identities=15% Similarity=0.115 Sum_probs=71.3
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCe--EEEeCCeEEeCcccCCCCCC---Cch------------HHHH
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFP---DVG------------FSYI 70 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~--riate~a~f~~pe~~lGl~p---~~g------------~~~~ 70 (293)
-+.++..|...+.||...+.|.|.+.|..|++++|- |++.+++++.+.....|+.- +.- ....
T Consensus 74 GlaIyd~m~~~~~~V~Ti~~G~AaS~As~il~aG~kgkR~~~pna~iMIHqp~~~~~G~a~di~~~a~el~~~~~~l~~i 153 (201)
T PRK14513 74 GLAIYDTMRYIKAPVSTICVGIAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGFRGNTPDLEVQAKEVLFLRDTLVDI 153 (201)
T ss_pred HHHHHHHHHhcCCCEEEEEEeeehhhHHHHHhcCCCCcEEecCCeEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 346778899999999999999999999999999985 99999999999887655421 110 0001
Q ss_pred HhcCCCcH-HHHHHHhhcCCCCCCHHHHHHcCccceeccCCC
Q 022721 71 AAKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGN 111 (293)
Q Consensus 71 l~r~~G~~-~~a~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~ 111 (293)
+.+..|.. ..-..++-....++ |+||+++||+|+++++..
T Consensus 154 ya~~Tg~~~~~I~~~~~rd~~ms-a~EA~eyGliD~I~~~~~ 194 (201)
T PRK14513 154 YHRHTDLPHEKLLRDMERDYFMS-PEEAKAYGLIDSVIEPTR 194 (201)
T ss_pred HHHHHCcCHHHHHHHhccCcccC-HHHHHHcCCCcEEeccCC
Confidence 11122211 01122222345588 999999999999997643
No 122
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=97.23 E-value=0.0022 Score=56.00 Aligned_cols=102 Identities=13% Similarity=0.030 Sum_probs=69.8
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCe--EEEeCCeEEeCcccCCCCCCCch-H---H-----------HH
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVG-F---S-----------YI 70 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~--riate~a~f~~pe~~lGl~p~~g-~---~-----------~~ 70 (293)
-..++..|..++.||...+.|.|.+.|..|++++|- |++.+++++.+....-|..-... . . ..
T Consensus 72 g~aIyd~m~~~~~~V~t~~~G~AaS~AslIl~aG~~~~R~~~p~a~iMIHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~ 151 (196)
T PRK12551 72 GLGIFDTMQHVKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTE 151 (196)
T ss_pred HHHHHHHHHhcCCCEEEEEEEEehhHHHHHHhCCCCCceecCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHH
Confidence 345777888999999999999999999999999885 88999999998776544321111 0 0 01
Q ss_pred HhcCCCcH-HHHHHHhhcCCCCCCHHHHHHcCccceeccCC
Q 022721 71 AAKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPSG 110 (293)
Q Consensus 71 l~r~~G~~-~~a~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~ 110 (293)
+.+..|.. ..-..++-....++ |+||+++||+|++++..
T Consensus 152 ya~~tG~~~~~i~~~~~rd~~ms-a~EA~eyGliD~I~~~~ 191 (196)
T PRK12551 152 LSERTGQPLERIQEDTDRDFFMS-PSEAVEYGLIDLVIDKR 191 (196)
T ss_pred HHHHHCcCHHHHHHHhhcCcCCC-HHHHHHcCCCcEEeccC
Confidence 11122211 02222333345588 99999999999999754
No 123
>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit. Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=97.09 E-value=0.0038 Score=56.12 Aligned_cols=91 Identities=9% Similarity=-0.019 Sum_probs=59.2
Q ss_pred HHHHHHHhC---CCcEEEEECCccchhHHH-HhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHh
Q 022721 10 SLICKISEY---KKPYISLMDGVTMGFGIG-ISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 85 (293)
Q Consensus 10 ~l~~~i~~~---~kPvIa~vnG~a~GgG~~-lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ 85 (293)
++.+.+... +.|+|++|-|.+.|||+. +.+.+|.++|.++ +.++..+.-+++..+.+-.. ...++.
T Consensus 95 ~l~~a~a~a~~~~vP~IsvI~g~a~ggg~lamg~~ad~v~Alp~-------A~i~vm~~e~aa~I~~~~~~---~~~e~a 164 (238)
T TIGR03134 95 HLAKALALARLAGHPVIGLIYGKAISGAFLAHGLQADRIIALPG-------AMVHVMDLESMARVTKRSVE---ELEALA 164 (238)
T ss_pred HHHHHHHHhhcCCCCEEEEEeCCccHHHHHHHccCcCeEEEcCC-------cEEEecCHHHHHHHHccCHh---HHHHHH
Confidence 344555544 599999999999998754 3334677666554 45567766666666654332 334443
Q ss_pred hcCC--CCCCHHHHHHcCccceeccCCC
Q 022721 86 MTGK--RISTPSDALFAGLGTDYVPSGN 111 (293)
Q Consensus 86 ltG~--~l~~a~eA~~~Gl~~~~v~~~~ 111 (293)
-+-. ..+ ...+.++|++|.++++.+
T Consensus 165 ~~~~~~a~~-~~~~~~~G~vd~vi~~~~ 191 (238)
T TIGR03134 165 KSSPVFAPG-IENFVKLGGVHALLDVAD 191 (238)
T ss_pred HhhhhhccC-HHHHHhCCCccEEeCCCC
Confidence 3322 234 667999999999998654
No 124
>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=96.86 E-value=0.006 Score=56.24 Aligned_cols=92 Identities=22% Similarity=0.206 Sum_probs=63.4
Q ss_pred HHHHHHhCCCcEEEEECCccchhHHH-HhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcCC
Q 022721 11 LICKISEYKKPYISLMDGVTMGFGIG-ISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGK 89 (293)
Q Consensus 11 l~~~i~~~~kPvIa~vnG~a~GgG~~-lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG~ 89 (293)
...++.....|.|+++-|+|.||+.. +++.+|++|+.+++.+++.-.+ .+...+|.. +. +
T Consensus 185 ~~~~~~~~~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------Vie~ti~e~-------lp-e 245 (285)
T TIGR00515 185 ALAKMSERGLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPR-----------VIEQTVREK-------LP-E 245 (285)
T ss_pred HHHHHHcCCCCEEEEEeCCcchHHHHHHHhCCCEEEEECCeEEEcCCHH-----------HHHHHhcCc-------cc-h
Confidence 44556667899999999999999654 5569999999988887652221 122222211 11 3
Q ss_pred CCCCHHHHHHcCccceeccCCChHHHHHHHHh
Q 022721 90 RISTPSDALFAGLGTDYVPSGNLGSLKEALLA 121 (293)
Q Consensus 90 ~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~ 121 (293)
.+.+++-+.+.|++|.+|++.++.....++.+
T Consensus 246 ~~q~ae~~~~~G~vD~iv~~~~~r~~l~~~L~ 277 (285)
T TIGR00515 246 GFQTSEFLLEHGAIDMIVHRPEMKKTLASLLA 277 (285)
T ss_pred hcCCHHHHHhCCCCcEEECcHHHHHHHHHHHH
Confidence 34337778899999999999888877655433
No 125
>PRK12552 ATP-dependent Clp protease-like protein; Reviewed
Probab=96.84 E-value=0.0056 Score=54.36 Aligned_cols=99 Identities=16% Similarity=0.101 Sum_probs=68.4
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCe--EEEeCCeEEeCcccCCCCCCCchHH----HHHhcCCCcHHHHH
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFS----YIAAKGPGGGSVGA 82 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~--riate~a~f~~pe~~lGl~p~~g~~----~~l~r~~G~~~~a~ 82 (293)
..++..|...+-||...+-|.|.+.|..|++++|- |++.+++++.+.....|..-...-. ..+-++--.- ...
T Consensus 97 laIyD~m~~ik~~V~Tv~~G~AaS~AslIl~aG~kg~R~alpns~iMIHqP~~~~~G~A~di~~~a~el~~~r~~l-~~i 175 (222)
T PRK12552 97 FAICDTMRYIKPPVHTICIGQAMGTAAMILSAGTKGQRASLPHATIVLHQPRSGARGQATDIQIRAKEVLHNKRTM-LEI 175 (222)
T ss_pred HHHHHHHHhcCCCeEEEEEeehhhHHHHHHhCCCCCceecCCCcEEEeccCCcccccCHHHHHHHHHHHHHHHHHH-HHH
Confidence 55677888899999999999999999999999985 9999999999988765542111000 0111110000 112
Q ss_pred HHhhcC-------------CCCCCHHHHHHcCccceeccC
Q 022721 83 YLGMTG-------------KRISTPSDALFAGLGTDYVPS 109 (293)
Q Consensus 83 ~l~ltG-------------~~l~~a~eA~~~Gl~~~~v~~ 109 (293)
|.--|| ..++ |+||+++||+|+++.+
T Consensus 176 ya~~TG~~~e~I~~d~~rd~wms-A~EA~eyGliD~Ii~~ 214 (222)
T PRK12552 176 LSRNTGQTVEKLSKDTDRMFYLT-PQEAKEYGLIDRVLES 214 (222)
T ss_pred HHHHHCCCHHHHHHHhcCCCcCC-HHHHHHcCCCcEEecc
Confidence 222344 4588 9999999999999965
No 126
>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=96.74 E-value=0.011 Score=51.58 Aligned_cols=100 Identities=14% Similarity=0.078 Sum_probs=68.4
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeE--EEeCCeEEeCcccCCCCCCCchHHH----------------H
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYR--IVTEKTLLAMPENGIGLFPDVGFSY----------------I 70 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~r--iate~a~f~~pe~~lGl~p~~g~~~----------------~ 70 (293)
+.++..|...++||...+-|.|...|..|+++++.. ++.+++++.+.... |.+-+...=. .
T Consensus 75 ~AIydtm~~ik~~V~ti~~G~AaSmgs~l~~aG~~g~r~~lPnsrimIHqP~-gg~~G~a~Di~i~A~ei~~~~~~l~~i 153 (200)
T COG0740 75 LAIYDTMQFIKPPVSTICMGQAASMGSVLLMAGDKGKRFALPNARIMIHQPS-GGAQGQASDIEIHAREILKIKERLNRI 153 (200)
T ss_pred HHHHHHHHhcCCCeEEEEecHHHhHHHHHHhcCCCCCceeCCCceEEEecCC-ccCccCHHHHHHHHHHHHHHHHHHHHH
Confidence 456778899999999999999999999999999884 99999998876665 3332221100 1
Q ss_pred HhcCCCcHHHHH--HHhhcCCCCCCHHHHHHcCccceeccCCC
Q 022721 71 AAKGPGGGSVGA--YLGMTGKRISTPSDALFAGLGTDYVPSGN 111 (293)
Q Consensus 71 l~r~~G~~~~a~--~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~ 111 (293)
+...-|.. ... ...=....++ |+||+++||+|+++...+
T Consensus 154 ~a~~TGq~-~e~i~~d~drd~~ms-a~eA~~yGLiD~V~~~~~ 194 (200)
T COG0740 154 YAEHTGQT-LEKIEKDTDRDTWMS-AEEAKEYGLIDKVIESRE 194 (200)
T ss_pred HHHHcCCC-HHHHHHhhcccccCC-HHHHHHcCCcceeccccc
Confidence 11112221 111 1111245588 999999999999997653
No 127
>PRK11778 putative inner membrane peptidase; Provisional
Probab=96.66 E-value=0.012 Score=55.44 Aligned_cols=44 Identities=11% Similarity=0.099 Sum_probs=39.1
Q ss_pred HHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeC
Q 022721 11 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 54 (293)
Q Consensus 11 l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~ 54 (293)
.+.++....||+|+++++.|.-||..++++||-++|.+.+.++.
T Consensus 146 ~l~~lr~~~kpVva~v~~~AASggY~iAsaAD~I~A~P~a~vGS 189 (330)
T PRK11778 146 QLQRLRDAGIPLTVAVDKVAASGGYMMACVADKIIAAPFAIVGS 189 (330)
T ss_pred HHHHHHhcCCCEEEEECCchhhHHHHHHHhCCEEEECCCCeEEe
Confidence 35567778899999999999999999999999999999888765
No 128
>PRK05654 acetyl-CoA carboxylase subunit beta; Validated
Probab=96.61 E-value=0.0078 Score=55.73 Aligned_cols=92 Identities=22% Similarity=0.184 Sum_probs=61.9
Q ss_pred HHHHHHhCCCcEEEEECCccchhHHH-HhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcCC
Q 022721 11 LICKISEYKKPYISLMDGVTMGFGIG-ISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGK 89 (293)
Q Consensus 11 l~~~i~~~~kPvIa~vnG~a~GgG~~-lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG~ 89 (293)
...++.....|.|+++-|+|.||+.. +++.+|++|+.+.+.+++.-. . .....+| ..+ . +
T Consensus 186 a~~~~~~a~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGp------r-----vie~~~~-----e~l--p-e 246 (292)
T PRK05654 186 ALKRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPKALIGFAGP------R-----VIEQTVR-----EKL--P-E 246 (292)
T ss_pred HHHHHHcCCCCEEEEEeCCCchHHHHHHHHcCCEEEEecCcEEEecCH------H-----HHHhhhh-----hhh--h-h
Confidence 44456667899999999999999654 566799999988877754211 1 1122222 111 1 2
Q ss_pred CCCCHHHHHHcCccceeccCCChHHHHHHHHh
Q 022721 90 RISTPSDALFAGLGTDYVPSGNLGSLKEALLA 121 (293)
Q Consensus 90 ~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~ 121 (293)
.+.+++-+.+.|++|.+|++.++.....++.+
T Consensus 247 ~~~~ae~~~~~G~vD~Vv~~~e~r~~l~~~L~ 278 (292)
T PRK05654 247 GFQRAEFLLEHGAIDMIVHRRELRDTLASLLA 278 (292)
T ss_pred hhcCHHHHHhCCCCcEEECHHHHHHHHHHHHH
Confidence 24337778899999999999888776655433
No 129
>PRK07189 malonate decarboxylase subunit beta; Reviewed
Probab=96.56 E-value=0.0057 Score=56.71 Aligned_cols=40 Identities=25% Similarity=0.262 Sum_probs=34.8
Q ss_pred HHHhCCCcEEEEECCc--cchhHHHHhhhcCeEEEeCCeEEeC
Q 022721 14 KISEYKKPYISLMDGV--TMGFGIGISGHGRYRIVTEKTLLAM 54 (293)
Q Consensus 14 ~i~~~~kPvIa~vnG~--a~GgG~~lal~~D~riate~a~f~~ 54 (293)
.+... .|+|+++-|+ |+||+..++..||++|+++++.+++
T Consensus 141 ~ls~~-VP~I~vv~G~~gc~GG~a~~a~l~D~iIm~~~a~igl 182 (301)
T PRK07189 141 DLRAA-VPVIGLIGGRVGCFGGMGIAAALCSYLIVSEEGRLGL 182 (301)
T ss_pred HHhCC-CCEEEEEcCCCCCcHHHHHHHhcCCEEEEECCcEEec
Confidence 34444 9999999999 9999999999999999999887755
No 130
>PRK10949 protease 4; Provisional
Probab=96.50 E-value=0.015 Score=59.27 Aligned_cols=46 Identities=22% Similarity=0.242 Sum_probs=38.3
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeC
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 54 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~ 54 (293)
++.+.++....|||||.+.|.|.-||.-++++||.++|.+.+..+-
T Consensus 386 ~~~i~~~r~~gKPVvas~~~~aASggY~iA~aad~I~a~p~t~tGS 431 (618)
T PRK10949 386 RAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTGS 431 (618)
T ss_pred HHHHHHHHhcCCcEEEEECCCCccHHHHHHHhcCEEEECCCCceee
Confidence 4445556667899999999999999999999999999999776443
No 131
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed
Probab=96.43 E-value=0.021 Score=52.81 Aligned_cols=85 Identities=18% Similarity=0.128 Sum_probs=58.3
Q ss_pred hCCCcEEEEECCccchhHHHH-hhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcCCCCCCHH
Q 022721 17 EYKKPYISLMDGVTMGFGIGI-SGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPS 95 (293)
Q Consensus 17 ~~~kPvIa~vnG~a~GgG~~l-al~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG~~l~~a~ 95 (293)
.-..|.|+++.|++.||+... ++.||++|+.+++.+++.- |. ......|.. +. +.|.+++
T Consensus 205 ~~~vP~Isvl~gPt~GG~aas~a~l~Diiiae~~A~IgfAG------Pr-----VIe~t~ge~-------lp-e~fq~ae 265 (296)
T CHL00174 205 NKKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG------KR-----VIEQTLNKT-------VP-EGSQAAE 265 (296)
T ss_pred cCCCCEEEEEcCCCchHHHHHHHHcccEEEEeCCeEEEeeC------HH-----HHHHhcCCc-------CC-cccccHH
Confidence 456999999999999998766 5569999987777664321 22 122222211 11 2344488
Q ss_pred HHHHcCccceeccCCChHHHHHHHH
Q 022721 96 DALFAGLGTDYVPSGNLGSLKEALL 120 (293)
Q Consensus 96 eA~~~Gl~~~~v~~~~l~~~~~~l~ 120 (293)
-+++.|++|.+|+..++......|.
T Consensus 266 ~l~~~G~vD~iV~r~~lr~~l~~ll 290 (296)
T CHL00174 266 YLFDKGLFDLIVPRNLLKGVLSELF 290 (296)
T ss_pred HHHhCcCceEEEcHHHHHHHHHHHH
Confidence 8999999999999888887665543
No 132
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=96.13 E-value=0.015 Score=52.93 Aligned_cols=59 Identities=15% Similarity=0.149 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCc
Q 022721 7 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDV 65 (293)
Q Consensus 7 ~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~ 65 (293)
...++...+.+++.|++++|++.|+-+|.-++++||-.++.+++.++-.+.++|-.|..
T Consensus 106 AA~~I~~~l~~~~~~v~v~VP~~A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~pA~ 164 (285)
T PF01972_consen 106 AAEQIARALREHPAKVTVIVPHYAMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYPAA 164 (285)
T ss_pred HHHHHHHHHHhCCCCEEEEECcccccHHHHHHHhCCeEEECCCCccCCCCccccCCChH
Confidence 34677888999999999999999999999999999999999999999999999987754
No 133
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=95.70 E-value=0.048 Score=54.45 Aligned_cols=105 Identities=10% Similarity=0.006 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHhCCCcEEEEECCccchhHHHHhh----hcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcC-CC---c
Q 022721 6 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISG----HGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKG-PG---G 77 (293)
Q Consensus 6 ~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal----~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~-~G---~ 77 (293)
+...++++++.....|.|+++-|.+.|||..-++ .+|+++|.+++.+ |+.++-+++..+.+. .. .
T Consensus 375 ~~~a~~~~a~~~~~vP~isvi~g~~~Gga~~am~~~~~~~d~~~a~p~a~~-------~v~~pe~a~~i~~~~~l~~~~~ 447 (512)
T TIGR01117 375 RHGAKVLYAYSEATVPKVTIITRKAYGGAYLAMCSKHLGADQVYAWPTAEI-------AVMGPAGAANIIFRKDIKEAKD 447 (512)
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCCchHHHHHhccccCCCCEEEEcCCCeE-------eecCHHHHHHHHhhhhcccccC
Confidence 4445677888899999999999999888654332 2788877766665 566444443333321 10 0
Q ss_pred HHHHHHHhh---cCCCCCCHHHHHHcCccceeccCCChHHHHHH
Q 022721 78 GSVGAYLGM---TGKRISTPSDALFAGLGTDYVPSGNLGSLKEA 118 (293)
Q Consensus 78 ~~~a~~l~l---tG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~ 118 (293)
......-.+ .-+..+ +..+.+.|++|.+|++.+.....-.
T Consensus 448 ~~~~~~~~~~~~~~~~~~-~~~~a~~g~vD~VI~P~~tR~~l~~ 490 (512)
T TIGR01117 448 PAATRKQKIAEYREEFAN-PYKAAARGYVDDVIEPKQTRPKIVN 490 (512)
T ss_pred HHHHHHHHHHHHHHhhcC-HHHHHhcCCCCeeEChHHHHHHHHH
Confidence 001111111 112335 8889999999999998877765543
No 134
>KOG1683 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=95.66 E-value=0.0061 Score=57.49 Aligned_cols=104 Identities=14% Similarity=0.116 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEECCccchhH--HHHhhhcCeEEEe--CCeEEeCcccCCCCC-CCchHHHHHhcCCCc
Q 022721 3 EVFTAEYSLICKISEYKKPYISLMDGVTMGFG--IGISGHGRYRIVT--EKTLLAMPENGIGLF-PDVGFSYIAAKGPGG 77 (293)
Q Consensus 3 ~~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG--~~lal~~D~riat--e~a~f~~pe~~lGl~-p~~g~~~~l~r~~G~ 77 (293)
.++..+.+++...+.++.|+.+++||++--|| +.++-+|+|++.. ..-..+..+...++. |.+-.-.+ ...+|.
T Consensus 132 a~~m~LlEii~~~~tS~~~iA~Ain~~~~~gk~~vvVg~c~gf~v~r~l~~y~~~~~~~l~e~g~~p~~iD~~-~t~fGf 210 (380)
T KOG1683|consen 132 AHWMQLLEIILALYTSKLTIATAINGGSPAGKLPVVVGNCCGFRVNRLLPPYTIGLNELLLEIGADPWLIDSL-ITKFGF 210 (380)
T ss_pred HHHHHHHHHHHhcCCCchHHHHHHhcccccCCccEEeccCCceEEEecccHHHHHHHHHHHHcCCCHHHHHHH-HHhcCc
Confidence 56788899999999999999999999999998 8888999999988 444446788888855 55544433 445676
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHcCccceeccC
Q 022721 78 GSVGAYLGMTGKRISTPSDALFAGLGTDYVPS 109 (293)
Q Consensus 78 ~~~a~~l~ltG~~l~~a~eA~~~Gl~~~~v~~ 109 (293)
. .|-.-+--|.-++ -.||+..|+++.+.+.
T Consensus 211 ~-~g~~~L~d~~gfd-v~eal~~gl~~~~~~r 240 (380)
T KOG1683|consen 211 R-VGERALADGVGFD-VAEALAVGLGDEIGPR 240 (380)
T ss_pred c-ccHHHHhhccCcc-HHHHHhhccchhccch
Confidence 6 7777777788999 8999999999999885
No 135
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=95.57 E-value=0.098 Score=48.01 Aligned_cols=88 Identities=19% Similarity=0.221 Sum_probs=66.0
Q ss_pred HHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcCC
Q 022721 10 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGK 89 (293)
Q Consensus 10 ~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG~ 89 (293)
+-...|..++.|+||.|=|---+||+-=...+|-+.+-+++.++. +.|. |++..|.+=. +.+.+ +....
T Consensus 179 ~nL~em~~LkvPiI~iVIGEGgSGGALAi~vad~V~mle~s~ySV------isPE-G~AsILWkD~---~ka~e-AAe~m 247 (317)
T COG0825 179 RNLREMARLKVPIISIVIGEGGSGGALAIGVADRVLMLENSTYSV------ISPE-GCASILWKDA---SKAKE-AAEAM 247 (317)
T ss_pred HHHHHHhCCCCCEEEEEecCCCchhhHHhhHHHHHHHHHhceeee------cChh-hhhhhhhcCh---hhhHH-HHHHc
Confidence 446678899999999999988777775566689999999999963 3455 4454666533 24443 33456
Q ss_pred CCCCHHHHHHcCccceeccC
Q 022721 90 RISTPSDALFAGLGTDYVPS 109 (293)
Q Consensus 90 ~l~~a~eA~~~Gl~~~~v~~ 109 (293)
.++ |.++.++|++|.+||.
T Consensus 248 kit-a~dLk~lgiID~II~E 266 (317)
T COG0825 248 KIT-AHDLKELGIIDGIIPE 266 (317)
T ss_pred CCC-HHHHHhCCCcceeccC
Confidence 789 9999999999999974
No 136
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=94.45 E-value=0.08 Score=52.62 Aligned_cols=78 Identities=19% Similarity=0.258 Sum_probs=54.4
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCC-eEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhh
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM 86 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~-a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~l 86 (293)
.+.-..+++. ..|+|+++.|+|.|||..++..||++|++++ +.+. +. +...+. ..
T Consensus 121 i~~~~~~~~~-~iP~I~vv~G~~~Gg~A~~~~~~d~~i~~~~~a~i~-------l~----GP~vv~------------~~ 176 (493)
T PF01039_consen 121 IFRAIARLSG-GIPQISVVTGPCTGGGAYLAALSDFVIMVKGTARIF-------LA----GPRVVE------------SA 176 (493)
T ss_dssp HHHHHHHHHT-TS-EEEEEESEEEGGGGHHHHHSSEEEEETTTCEEE-------SS----THHHHH------------HH
T ss_pred HHHHHHHHhc-CCCeEEEEccccccchhhcccccCccccCccceEEE-------ec----cccccc------------cc
Confidence 3444555666 9999999999999999999999999999987 7764 32 111111 23
Q ss_pred cCCCCCCHHH-------HHHcCccceeccCC
Q 022721 87 TGKRISTPSD-------ALFAGLGTDYVPSG 110 (293)
Q Consensus 87 tG~~l~~a~e-------A~~~Gl~~~~v~~~ 110 (293)
||+.++ .++ +...|.+|.+++++
T Consensus 177 ~Ge~~~-~~~lgG~~~h~~~sG~~d~v~~de 206 (493)
T PF01039_consen 177 TGEEVD-SEELGGADVHAAKSGVVDYVVDDE 206 (493)
T ss_dssp HSSCTS-HHHHHBHHHHHHTSSSSSEEESSH
T ss_pred cCcccc-chhhhhhhhhcccCCCceEEEech
Confidence 355666 443 24679999999765
No 137
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=94.43 E-value=0.1 Score=52.69 Aligned_cols=79 Identities=11% Similarity=0.199 Sum_probs=52.2
Q ss_pred HHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCC-eEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcCCCC
Q 022721 13 CKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRI 91 (293)
Q Consensus 13 ~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~-a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG~~l 91 (293)
..+.....|+|+++-|+|.|||+.....||++|+++. +.+.+ . +........|.. .+.+.+
T Consensus 199 ~~ls~~~VP~Isvv~G~~~gGgAy~~a~~D~vim~~~~a~i~~-------a----GP~vV~~~~Ge~-------v~~eeL 260 (569)
T PLN02820 199 ARMSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFL-------A----GPPLVKAATGEE-------VSAEDL 260 (569)
T ss_pred HHHhCCCCCEEEEEeCCCChHHHHHHHhCCceEEecCCcEEEe-------c----CHHHHHhhcCcc-------cCHHHh
Confidence 3355567999999999999999999999999999964 54533 1 111222223311 344555
Q ss_pred CCHHHHH--HcCccceeccCC
Q 022721 92 STPSDAL--FAGLGTDYVPSG 110 (293)
Q Consensus 92 ~~a~eA~--~~Gl~~~~v~~~ 110 (293)
. +.+.+ ..|.+|.+++++
T Consensus 261 G-Ga~~h~~~sGv~d~~~~de 280 (569)
T PLN02820 261 G-GADVHCKVSGVSDHFAQDE 280 (569)
T ss_pred C-CHHHhcccccccccccCch
Confidence 5 34444 379999888765
No 138
>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification.; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A.
Probab=94.28 E-value=0.06 Score=44.93 Aligned_cols=40 Identities=8% Similarity=0.076 Sum_probs=32.0
Q ss_pred HHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeC
Q 022721 15 ISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 54 (293)
Q Consensus 15 i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~ 54 (293)
..+..|||||.++|.+..+|.-|+++||-+++++.+.++.
T Consensus 2 ~~~~~KpV~a~~~~~~~S~~Y~lAs~ad~I~~~p~s~vgs 41 (154)
T PF01343_consen 2 FKASGKPVVAYAEGYAASGAYYLASAADEIYANPSSSVGS 41 (154)
T ss_dssp HHHTT--EEEEEEEEEETHHHHHHTTSSEEEE-TT-EEE-
T ss_pred ccccCCeEEEEECCcchhHHHHHHHcCCEEEecCCCEEEE
Confidence 4578999999999999989999999999999999888765
No 139
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=94.20 E-value=0.13 Score=51.42 Aligned_cols=74 Identities=14% Similarity=0.102 Sum_probs=50.4
Q ss_pred CCCcEEEEECCccchhHHHHhhhcCeEEEeCCe-EEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcCCCCCCHHH
Q 022721 18 YKKPYISLMDGVTMGFGIGISGHGRYRIVTEKT-LLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSD 96 (293)
Q Consensus 18 ~~kPvIa~vnG~a~GgG~~lal~~D~riate~a-~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG~~l~~a~e 96 (293)
-..|+|+++-|+|.||+......||++|+++++ .+. +. +........|.. ++.+.+. +.+
T Consensus 153 ~~iP~Isvv~G~~~GG~a~~~al~D~vim~~~~a~i~-------~a----GP~vv~~~~Ge~-------v~~e~lG-Ga~ 213 (512)
T TIGR01117 153 GVVPQISAIMGPCAGGAVYSPALTDFIYMVDNTSQMF-------IT----GPQVIKTVTGEE-------VTAEQLG-GAM 213 (512)
T ss_pred CCCcEEEEEecCCCcHHHHHHHhcCceEEeccceEEE-------ec----ChHHHHhhcCcc-------cchhhcc-hHH
Confidence 358999999999999998888899999999864 343 32 121223333322 2555565 455
Q ss_pred HH--HcCccceeccCC
Q 022721 97 AL--FAGLGTDYVPSG 110 (293)
Q Consensus 97 A~--~~Gl~~~~v~~~ 110 (293)
.+ ..|.+|.+++++
T Consensus 214 ~h~~~sGv~d~~~~de 229 (512)
T TIGR01117 214 AHNSVSGVAHFIAEDD 229 (512)
T ss_pred HhccccceeEEecCCh
Confidence 44 479999998764
No 140
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=94.18 E-value=0.082 Score=51.19 Aligned_cols=67 Identities=10% Similarity=0.089 Sum_probs=52.3
Q ss_pred HHHHHhccCcHHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhCCCCcHHHHHHHH---hhCCCCCCCCCCC
Q 022721 191 ALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAV---LVDKDQNPKWNPA 267 (293)
Q Consensus 191 ~~~~i~~~sp~sl~~~k~~l~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~~~~~d~~egv~a~---lv~k~r~P~w~~~ 267 (293)
.++++...+|.+++.+|+.++... .+....+..+...+..++.++|+.|++.+| + +| +.|.|..+
T Consensus 229 ~~~~i~~~~p~av~~~k~~~~~~~----------~~~~~~l~~~~~~i~~~f~~~d~~ei~~al~~~~-~k-r~~~wa~~ 296 (401)
T PLN02157 229 QLKKLLTDDPSVVESCLEKCAEVA----------HPEKTGVIRRIDLLEKCFSHDTVEEIIDSLEIEA-GR-RKDTWCIT 296 (401)
T ss_pred HHHHHHcCCHHHHHHHHHHHhccc----------CCcchhHHHHHHHHHHHhcCCCHHHHHHHHHhhh-cc-cchHHHHH
Confidence 344888899999999999986542 234566777788888999999999999999 5 67 67889755
Q ss_pred Cc
Q 022721 268 SL 269 (293)
Q Consensus 268 ~~ 269 (293)
++
T Consensus 297 ~~ 298 (401)
T PLN02157 297 TL 298 (401)
T ss_pred HH
Confidence 43
No 141
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=93.58 E-value=0.13 Score=48.29 Aligned_cols=49 Identities=10% Similarity=0.029 Sum_probs=39.1
Q ss_pred HHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccC
Q 022721 9 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENG 58 (293)
Q Consensus 9 ~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~ 58 (293)
++.+.++..-. |+++.|+++|+-||..++++||.++|+++|..+=--+.
T Consensus 119 ~~~l~~l~~~~-PV~v~v~~~AASGGY~IA~aAd~I~a~p~si~GSIGVi 167 (317)
T COG0616 119 ARALKRLRAKK-PVVVSVGGYAASGGYYIALAADKIVADPSSITGSIGVI 167 (317)
T ss_pred HHHHHHHhhcC-CEEEEECCeecchhhhhhccCCEEEecCCceeeeceeE
Confidence 34444444444 99999999999999999999999999999998743333
No 142
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
Probab=91.88 E-value=0.74 Score=44.72 Aligned_cols=109 Identities=13% Similarity=0.038 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEECC---ccchhHHHHhhhcCeEEEeCCeEEeCcccCCCC--CCC-ch-HHH------HHh
Q 022721 6 TAEYSLICKISEYKKPYISLMDG---VTMGFGIGISGHGRYRIVTEKTLLAMPENGIGL--FPD-VG-FSY------IAA 72 (293)
Q Consensus 6 ~~~~~l~~~i~~~~kPvIa~vnG---~a~GgG~~lal~~D~riate~a~f~~pe~~lGl--~p~-~g-~~~------~l~ 72 (293)
....++..+|.+.+.|+++.+.= +|.-+|..++++||+..+.+.+.++-...-.+- .+. .. .+. -+.
T Consensus 72 ~sm~~iv~~i~~s~vPV~~yv~p~ga~AaSAGtyI~m~~hiaaMAPgT~iGaa~Pi~~~g~~~~~~~~~n~~~ay~~~~A 151 (436)
T COG1030 72 DSMRQIVRAILNSPVPVIGYVVPDGARAASAGTYILMATHIAAMAPGTNIGAATPIAGGGTSAKEANTTNAAVAYIRSLA 151 (436)
T ss_pred HHHHHHHHHHHcCCCCEEEEEcCCCcchhchhhHHHHhcChhhhCCCCcccccceecCCCCCccchhhHHHHHHHHHHHH
Confidence 44567899999999998888743 599999999999999999999988876544332 111 11 111 122
Q ss_pred cCCCcH-HHHHHHhhcCCCCCCHHHHHHcCccceeccCCChHHHHH
Q 022721 73 KGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKE 117 (293)
Q Consensus 73 r~~G~~-~~a~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~ 117 (293)
+.-|++ ..+..++.....++ ++||++.|++|.+.. ++.+...
T Consensus 152 ~~~gRN~~~ae~~v~~~~~l~-a~eA~~~~vid~iA~--~~~ell~ 194 (436)
T COG1030 152 EERGRNPTWAERFVTENLSLT-AEEALRQGVIDLIAR--DLNELLK 194 (436)
T ss_pred HHcCCChHHHHHHhhhccCCC-hhHHHhcCccccccC--CHHHHHH
Confidence 333432 26677777889999 999999999997754 4444433
No 143
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=91.67 E-value=0.15 Score=50.66 Aligned_cols=42 Identities=19% Similarity=0.167 Sum_probs=35.6
Q ss_pred HHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCe
Q 022721 8 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKT 50 (293)
Q Consensus 8 ~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a 50 (293)
.|.-..+++.. .|+|++|-|.|.|||+.+-..||++|+++++
T Consensus 153 iF~~~a~~Sg~-IPqIsvv~G~c~gGgaY~pal~D~~imv~~~ 194 (526)
T COG4799 153 IFYRNARASGV-IPQISVVMGPCAGGGAYSPALTDFVIMVRDQ 194 (526)
T ss_pred HHHHHHHhccC-CCEEEEEEecCcccccccccccceEEEEcCC
Confidence 34444556666 9999999999999999999999999999874
No 144
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=90.89 E-value=1.1 Score=45.37 Aligned_cols=105 Identities=12% Similarity=0.103 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhh----hcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcC-C---
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISG----HGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKG-P--- 75 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal----~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~-~--- 75 (293)
..+...++++++.....|.|+++=|.+.|+|..-++ ..|++++ .|...+|..+.-|+...+.+. .
T Consensus 424 ~~~~~a~l~~A~a~~~VP~isvi~g~a~G~g~~aM~g~~~~~d~~~a-------wp~A~i~vmg~e~aa~il~~~e~~~~ 496 (569)
T PLN02820 424 IAKAGAKMVMAVACAKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFM-------WPNARIGVMGGAQAAGVLAQIERENK 496 (569)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEECCcchHHHHHhcCcCCCCCEEEE-------CCCCeEEecCHHHHHHHHHHHHhhhh
Confidence 356667889999999999999999999998764443 3455554 555566777666655555431 1
Q ss_pred ---C----cHHH-HHHH---hhcCCCCCCHHHHHHcCccceeccCCChHHHH
Q 022721 76 ---G----GGSV-GAYL---GMTGKRISTPSDALFAGLGTDYVPSGNLGSLK 116 (293)
Q Consensus 76 ---G----~~~~-a~~l---~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~ 116 (293)
| .... +++- -..-+..+ +..+...|++|.+|++.+-....
T Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~aa~~~~vD~VIdP~dTR~~l 547 (569)
T PLN02820 497 KRQGIQWSKEEEEAFKAKTVEAYEREAN-PYYSTARLWDDGVIDPADTRRVL 547 (569)
T ss_pred hhccccCCccHHHHHHHHHHHHHHHhCC-HHHHHHcCCcCcccCHHHHHHHH
Confidence 0 0001 1111 11122345 77788999999999887655543
No 145
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]
Probab=89.39 E-value=2.4 Score=38.85 Aligned_cols=88 Identities=23% Similarity=0.219 Sum_probs=59.4
Q ss_pred HHHHHHhCCCcEEEEECCccchh-HHHHhhhcCeEEEeCCeEEeCcccCCCCC-CCchHHHHHhcCCCcHHHHHHHhhcC
Q 022721 11 LICKISEYKKPYISLMDGVTMGF-GIGISGHGRYRIVTEKTLLAMPENGIGLF-PDVGFSYIAAKGPGGGSVGAYLGMTG 88 (293)
Q Consensus 11 l~~~i~~~~kPvIa~vnG~a~Gg-G~~lal~~D~riate~a~f~~pe~~lGl~-p~~g~~~~l~r~~G~~~~a~~l~ltG 88 (293)
.+.++.....|.|+.+.++.+|| -+.+++..|+.||-+.+.+ |+. |-+ .-..++.. +--|
T Consensus 187 Al~~l~ea~lpyIsVLt~PTtGGVsASfA~lGDi~iAEP~AlI-------GFAGpRV-----IEQTire~------LPeg 248 (294)
T COG0777 187 ALKRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPGALI-------GFAGPRV-----IEQTIREK------LPEG 248 (294)
T ss_pred HHHHHHhcCCceEEEecCCCccchhHhHHhccCeeecCccccc-------ccCcchh-----hhhhhccc------CCcc
Confidence 45667778999999999999998 5778888899988656655 554 221 11111111 1111
Q ss_pred CCCCCHHHHHHcCccceeccCCChHHHHHH
Q 022721 89 KRISTPSDALFAGLGTDYVPSGNLGSLKEA 118 (293)
Q Consensus 89 ~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~ 118 (293)
|..++-+++.|++|.+|+..++......
T Consensus 249 --fQ~aEfLlehG~iD~iv~R~elr~tla~ 276 (294)
T COG0777 249 --FQTAEFLLEHGMIDMIVHRDELRTTLAS 276 (294)
T ss_pred --hhhHHHHHHcCCceeeecHHHHHHHHHH
Confidence 2238899999999999998766665433
No 146
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=89.08 E-value=0.68 Score=46.07 Aligned_cols=105 Identities=14% Similarity=0.111 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhc----CeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCC-----
Q 022721 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHG----RYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGP----- 75 (293)
Q Consensus 5 ~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~----D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~----- 75 (293)
++...+++.++..++.|.|.++=|.+.|||....... |+++|.+++.+ |..++-+++..+.+.-
T Consensus 353 ~~~ga~~~~a~~~~~vP~itvi~~~~~Gga~~am~~~~~~~~~~~Awp~a~~-------~vm~~e~a~~i~~~~~~~~~~ 425 (493)
T PF01039_consen 353 IRAGARLLYALAEATVPKITVIVRKAYGGAYYAMCGRGYGPDFVFAWPTAEI-------GVMGPEGAASILYRDELEAAE 425 (493)
T ss_dssp HHHHHHHHHHHHHH-S-EEEEEEEEEEHHHHHHTTGGGGTTSEEEEETT-EE-------ESS-HHHHHHHHTHHHHHHSC
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeCCccCcchhhhcccccchhhhhhhhccee-------eecChhhhheeeehhhhhhhh
Confidence 3455678999999999999999999999887555544 67766666555 6665545444433210
Q ss_pred --C--cHH-HHHHHhhcCCC-CCCHHHHHHcCccceeccCCChHHHHH
Q 022721 76 --G--GGS-VGAYLGMTGKR-ISTPSDALFAGLGTDYVPSGNLGSLKE 117 (293)
Q Consensus 76 --G--~~~-~a~~l~ltG~~-l~~a~eA~~~Gl~~~~v~~~~l~~~~~ 117 (293)
| ... ....+.-.-+. .+ +..+...|++|.++++.+......
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~~~~~D~ii~p~~tR~~l~ 472 (493)
T PF01039_consen 426 AEGADPEAQRAEKIAEYEDELSS-PYRAASRGYVDDIIDPAETRKVLI 472 (493)
T ss_dssp HCCHSHHHHHHHHHHHHHHHHSS-HHHHHHTTSSSEESSGGGHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHhcCC-HHHHHhcCCCCCccCHHHHHHHHH
Confidence 0 000 01111111122 45 888999999999999887776553
No 147
>KOG0840 consensus ATP-dependent Clp protease, proteolytic subunit [Posttranslational modification, protein turnover, chaperones]
Probab=85.94 E-value=1 Score=40.73 Aligned_cols=92 Identities=17% Similarity=0.162 Sum_probs=50.3
Q ss_pred HHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCC-CCchHH----HHHh------cCCCcH
Q 022721 10 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF-PDVGFS----YIAA------KGPGGG 78 (293)
Q Consensus 10 ~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~-p~~g~~----~~l~------r~~G~~ 78 (293)
.+...|..++-||=..+=|.|.+-|..|..+. ++.-+++||..++=+. |-+|+. -..- ++--.-
T Consensus 141 AIYDtMq~ik~~V~Tic~G~Aas~aalLLaaG-----~KG~R~alPnsriMIhQP~gga~Gqa~Di~i~akE~~~~k~~l 215 (275)
T KOG0840|consen 141 AIYDTMQYIKPDVSTICVGLAASMAALLLAAG-----AKGKRYALPNSRIMIHQPSGGAGGQATDIVIQAKELMRIKEYL 215 (275)
T ss_pred hHHHHHHhhCCCceeeehhhHHhHHHHHHhcC-----CCcceeecCCceeEEeccCCCcCccchHHHHHHHHHHHHHHHH
Confidence 34556777777777777788877765544332 3445555555555444 322211 0100 000000
Q ss_pred HHHHHHhhcC-------------CCCCCHHHHHHcCccceecc
Q 022721 79 SVGAYLGMTG-------------KRISTPSDALFAGLGTDYVP 108 (293)
Q Consensus 79 ~~a~~l~ltG-------------~~l~~a~eA~~~Gl~~~~v~ 108 (293)
...|.--|| +.++ |.||.++||+|.|+.
T Consensus 216 -~~i~a~~Tgq~~e~i~~d~dRd~fms-a~EA~eyGliD~v~~ 256 (275)
T KOG0840|consen 216 -NEIYAKHTGQPLEVIEKDMDRDRFMS-AEEAKEYGLIDKVID 256 (275)
T ss_pred -HHHHHHhcCCcHHHHHhhhcccccCC-HHHHHHhcchhhhhc
Confidence 112222355 4478 999999999999985
No 148
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=83.52 E-value=11 Score=38.54 Aligned_cols=46 Identities=9% Similarity=-0.019 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEE
Q 022721 6 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLL 52 (293)
Q Consensus 6 ~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f 52 (293)
...++.+..+....|||||..++++ -+|..|+.+||-+++.+.+.+
T Consensus 113 ~ei~~ai~~fk~sgKpVvA~~~~~~-s~~YylAs~AD~I~~~p~G~v 158 (584)
T TIGR00705 113 VEIGSALSEFKDSGKPVYAYGTNYS-QGQYYLASFADEIILNPMGSV 158 (584)
T ss_pred HHHHHHHHHHHhcCCeEEEEEcccc-chhhhhhhhCCEEEECCCceE
Confidence 3455556666677899999999876 567889999999999876444
No 149
>PRK10949 protease 4; Provisional
Probab=79.67 E-value=10 Score=38.91 Aligned_cols=46 Identities=7% Similarity=0.007 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEe
Q 022721 7 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 53 (293)
Q Consensus 7 ~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~ 53 (293)
..++.+..+....|||||..+.++ -+|.-|+.+||-+++.+.+.++
T Consensus 133 eI~~ai~~fk~sGKpVvA~~~~~~-s~~YyLASaAD~I~l~P~G~v~ 178 (618)
T PRK10949 133 YIGKALREFRDSGKPVYAVGDSYS-QGQYYLASFANKIYLSPQGVVD 178 (618)
T ss_pred HHHHHHHHHHHhCCeEEEEecCcc-chhhhhhhhCCEEEECCCceEE
Confidence 445556667777899999766665 4578899999999998775554
No 150
>PF06744 DUF1215: Protein of unknown function (DUF1215); InterPro: IPR010623 This domain represents a conserved region situated towards the C-terminal end of several hypothetical bacterial proteins of unknown function. A few members resemble the ImcF protein, which has been proposed [] to be involved in Vibrio cholerae cell surface reorganisation that results in increased adherence to epithelial cells line and increased conjugation frequency.
Probab=50.72 E-value=88 Score=24.84 Aligned_cols=24 Identities=25% Similarity=0.576 Sum_probs=20.3
Q ss_pred CCCCCCCCCccCCCHHHHHhhhcCC
Q 022721 260 QNPKWNPASLEEVNQSEVEALFEPL 284 (293)
Q Consensus 260 r~P~w~~~~~~~v~~~~v~~~~~~~ 284 (293)
|-| |++.+-.||+.+|+.++|.|-
T Consensus 54 RYP-F~~~s~~dv~l~Df~~fF~p~ 77 (125)
T PF06744_consen 54 RYP-FDPDSSRDVSLADFARFFGPG 77 (125)
T ss_pred CCC-CCCCCcccCCHHHHHHHhcCC
Confidence 445 777788899999999999986
No 151
>COG4565 CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]
Probab=50.06 E-value=95 Score=27.64 Aligned_cols=59 Identities=17% Similarity=0.076 Sum_probs=36.6
Q ss_pred CCCchHHHHHhcCCCcHHHHHHHhh-c-CCCCCCHHHHHHcCccceeccCCChHHHHHHHHh
Q 022721 62 FPDVGFSYIAAKGPGGGSVGAYLGM-T-GKRISTPSDALFAGLGTDYVPSGNLGSLKEALLA 121 (293)
Q Consensus 62 ~p~~g~~~~l~r~~G~~~~a~~l~l-t-G~~l~~a~eA~~~Gl~~~~v~~~~l~~~~~~l~~ 121 (293)
.|+.-+.-+|+.+.... ..-..++ | .....+-.+|++.|.+|+++-|=.++.+...|.+
T Consensus 56 mPd~~Gi~lL~~ir~~~-~~~DVI~iTAA~d~~tI~~alr~Gv~DYLiKPf~~eRl~~aL~~ 116 (224)
T COG4565 56 MPDGNGIELLPELRSQH-YPVDVIVITAASDMETIKEALRYGVVDYLIKPFTFERLQQALTR 116 (224)
T ss_pred cCCCccHHHHHHHHhcC-CCCCEEEEeccchHHHHHHHHhcCchhheecceeHHHHHHHHHH
Confidence 37776666777654332 2222333 3 2333336799999999999988666666555443
No 152
>smart00250 PLEC Plectin repeat.
Probab=45.88 E-value=17 Score=22.68 Aligned_cols=18 Identities=39% Similarity=0.508 Sum_probs=16.7
Q ss_pred cCCCCCCHHHHHHcCccce
Q 022721 87 TGKRISTPSDALFAGLGTD 105 (293)
Q Consensus 87 tG~~l~~a~eA~~~Gl~~~ 105 (293)
||++++ -.+|++.||+|.
T Consensus 18 t~~~ls-v~eA~~~glid~ 35 (38)
T smart00250 18 TGQKLS-VEEALRRGLIDP 35 (38)
T ss_pred CCCCcC-HHHHHHcCCCCc
Confidence 899999 999999999975
No 153
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=43.11 E-value=21 Score=35.88 Aligned_cols=107 Identities=15% Similarity=0.108 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHhCCCcEEEEECCccchhHHHHhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhc-CCC-cHHHHH
Q 022721 5 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAK-GPG-GGSVGA 82 (293)
Q Consensus 5 ~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r-~~G-~~~~a~ 82 (293)
++.-.++++++..+..|.|..+-|.+.|||...+..-.+- .+-.|+.|.+++|..-+-|+.-.+.+ .+. ......
T Consensus 383 ik~Gakl~~A~aeatVPkitvI~rkayGga~~~M~~~~~~---~~~~~AwP~a~iaVMG~egAv~i~~~k~l~~~~~~~~ 459 (526)
T COG4799 383 IKHGAKLLYAVAEATVPKITVITRKAYGGAYYVMGGKALG---PDFNYAWPTAEIAVMGPEGAVSILYRKELAAAERPEE 459 (526)
T ss_pred HHhhhHHHhhHhhccCCeEEEEecccccceeeeecCccCC---CceeEecCcceeeecCHHHHHHHHHHHHhhcccCchh
Confidence 3455689999999999999999999999986544332222 55566677777777643344333332 111 000000
Q ss_pred H-------Hhhc-CCCCCCHHHHHHcCccceeccCCChHH
Q 022721 83 Y-------LGMT-GKRISTPSDALFAGLGTDYVPSGNLGS 114 (293)
Q Consensus 83 ~-------l~lt-G~~l~~a~eA~~~Gl~~~~v~~~~l~~ 114 (293)
. +.-. -+.+.++.-|.+.|++|.++++.+...
T Consensus 460 ~~~~~~~~~~~eY~~~~~~p~~aa~r~~iD~vI~p~~tR~ 499 (526)
T COG4799 460 REALLRKQLIAEYEEQFSNPYYAAERGYIDAVIDPADTRA 499 (526)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHhCCCCcccCHHHHHH
Confidence 0 1110 122222566778899999997764333
No 154
>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification.; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A.
Probab=42.93 E-value=8.4 Score=31.90 Aligned_cols=27 Identities=19% Similarity=0.069 Sum_probs=22.1
Q ss_pred hhcCCCCCCHHHHHHcCccceeccCCCh
Q 022721 85 GMTGKRISTPSDALFAGLGTDYVPSGNL 112 (293)
Q Consensus 85 ~ltG~~l~~a~eA~~~Gl~~~~v~~~~l 112 (293)
++.|..++ |++|++.||||.+-..+++
T Consensus 117 ~~~~~~~~-~~~A~~~GLiD~i~~~~~~ 143 (154)
T PF01343_consen 117 IADGGVFT-AQQALELGLIDEIGTFDEA 143 (154)
T ss_dssp HHCCHEEE-HHHHHHTTSSSEETSHHHH
T ss_pred HHhhcccc-HHHHHHcCchhhcCCHHHH
Confidence 56888999 9999999999999753333
No 155
>KOG0540 consensus 3-Methylcrotonyl-CoA carboxylase, non-biotin containing subunit/Acetyl-CoA carboxylase carboxyl transferase, subunit beta [Amino acid transport and metabolism; Lipid transport and metabolism]
Probab=41.86 E-value=45 Score=32.86 Aligned_cols=97 Identities=11% Similarity=0.042 Sum_probs=60.2
Q ss_pred HHHHHHHHHHhCCCcEEEEECCccchhHHHH---hhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcC-----CCcH
Q 022721 7 AEYSLICKISEYKKPYISLMDGVTMGFGIGI---SGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKG-----PGGG 78 (293)
Q Consensus 7 ~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~l---al~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~-----~G~~ 78 (293)
.-.+|+++.+..+.|-|.++-|.+.||...| .+.-|+.++-+++++++ .-.-++.-.+.+. ...+
T Consensus 410 ~gAklv~a~a~akvpkITiit~~syGG~y~m~sr~~~gd~~yawP~A~Iav-------mG~~~a~~Vi~q~~~e~a~~~~ 482 (536)
T KOG0540|consen 410 HGAKLVYAVACAKVPKITIITGGSYGGNYAMCSRGYSGDINYAWPNARIAV-------MGGKQAANVIFQITLEKAVALK 482 (536)
T ss_pred hhhhhhhhhhhccCceEEEEecCccCCcccccccccCCceeEEcccceeee-------ccccchhhhhhhhhhhhhhhhc
Confidence 3457889999999999999999999976553 23347777666666654 3222222233332 1111
Q ss_pred HHHHHHhhcCCCCCCHHHHHHcCccceeccCCChHHHH
Q 022721 79 SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLK 116 (293)
Q Consensus 79 ~~a~~l~ltG~~l~~a~eA~~~Gl~~~~v~~~~l~~~~ 116 (293)
....+.. |.++. |...||.|.+|++.......
T Consensus 483 ~~~~E~f--~npy~----a~~Rg~~D~II~p~~tR~vl 514 (536)
T KOG0540|consen 483 APYIEKF--GNPYY----AAARGWDDGIIDPSDTRKVL 514 (536)
T ss_pred chHHHHh--cCccH----HHHhhccccccChhHhhHHH
Confidence 1222332 66666 56889999999987665543
No 156
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=35.07 E-value=79 Score=28.42 Aligned_cols=97 Identities=12% Similarity=-0.020 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEECCccchhHHH-HhhhcCeEEEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHH
Q 022721 4 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIG-ISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 82 (293)
Q Consensus 4 ~~~~~~~l~~~i~~~~kPvIa~vnG~a~GgG~~-lal~~D~riate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~ 82 (293)
|+....+.+..-+...-|+|+++-|.++.|||- -.+.+|-.+| +|++.+-..+-..++. ..++. . ..=.
T Consensus 90 alAhla~a~a~AR~~GHpvI~Lv~G~A~SGaFLA~GlqA~rl~A-------L~ga~i~vM~~~s~AR-VTk~~-v-e~Le 159 (234)
T PF06833_consen 90 ALAHLAKAYALARLAGHPVIGLVYGKAMSGAFLAHGLQANRLIA-------LPGAMIHVMGKPSAAR-VTKRP-V-EELE 159 (234)
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEecccccHHHHHHHHHhcchhc-------CCCCeeecCChHHhHH-HhhcC-H-HHHH
Confidence 444445556666777899999999999999963 4455655554 5666555444444443 33322 1 1334
Q ss_pred HHhhcCCCC--CCHHHHHHcCccceeccCCC
Q 022721 83 YLGMTGKRI--STPSDALFAGLGTDYVPSGN 111 (293)
Q Consensus 83 ~l~ltG~~l--~~a~eA~~~Gl~~~~v~~~~ 111 (293)
+|.-|--.| + .+--.++|.++.+++.+.
T Consensus 160 ~la~s~PvfA~g-i~ny~~lG~l~~l~~~~~ 189 (234)
T PF06833_consen 160 ELAKSVPVFAPG-IENYAKLGALDELWDGDL 189 (234)
T ss_pred HHhhcCCCcCCC-HHHHHHhccHHHHhcccc
Confidence 444443332 3 455677888888887433
No 157
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=31.55 E-value=19 Score=23.37 Aligned_cols=19 Identities=37% Similarity=0.487 Sum_probs=16.0
Q ss_pred hcCCCCCCHHHHHHcCccce
Q 022721 86 MTGKRISTPSDALFAGLGTD 105 (293)
Q Consensus 86 ltG~~l~~a~eA~~~Gl~~~ 105 (293)
-||++++ -++|++.||+|.
T Consensus 17 ~tg~~ls-v~~A~~~glId~ 35 (45)
T PF00681_consen 17 ETGERLS-VEEAIQRGLIDS 35 (45)
T ss_dssp TTTEEEE-HHHHHHTTSS-H
T ss_pred CCCeEEc-HHHHHHCCCcCH
Confidence 3789999 999999999974
No 158
>PF12295 Symplekin_C: Symplekin tight junction protein C terminal; InterPro: IPR022075 This domain family is found in eukaryotes, and is approximately 180 amino acids in length. There is a single completely conserved residue P that may be functionally important. Symplekn has been localized, by light and electron microscopy, to the plaque associated with the cytoplasmic face of the tight junction-containing zone (zonula occludens) of polar epithelial cells and of Sertoli cells of testis. However, both the mRNA and the protein can also be detected in a wide range of cell types that do not form tight junctions. Careful analyses have revealed that the protein occurs in all these diverse cells in the nucleoplasm, and only in those cells forming tight junctions is it recruited, partly but specifically, to the plaque structure of the zonula occludens.
Probab=30.38 E-value=2.6e+02 Score=23.93 Aligned_cols=120 Identities=20% Similarity=0.320 Sum_probs=70.0
Q ss_pred HhhcCCCCCCchhccchhHHHhhhCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhh
Q 022721 137 AKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASA 216 (293)
Q Consensus 137 ~~~~~~~~~~~~l~~~~~~i~~~f~~~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp~sl~~~k~~l~~~~~~ 216 (293)
.-|..++..+.+++....+++-||...+ ++. .+....++++|....|+..-..+-.++... +
T Consensus 61 ~lH~id~~~~~~~k~~~~a~~~Cf~~~~----vf~-------------~evla~~l~ql~~~~~lP~LfmRTviq~~~-~ 122 (183)
T PF12295_consen 61 ALHNIDPEKDVPLKKIIEALDLCFSMRD----VFT-------------QEVLASALQQLVEQPPLPLLFMRTVIQALQ-K 122 (183)
T ss_pred HHHhCCccccccHHHHHHHHHHHHcccc----cCC-------------HHHHHHHHHHHHCCCCCcHHHHHHHHHHHH-H
Confidence 3333433333667777889999998872 111 456677778888887766544444443322 1
Q ss_pred cCCCccccCCHHHHHHH-HHHH-HHhhCCCCcHHHHHHHHhhCCCCCCCCCCCCccCCCHHHHHhhhcCC
Q 022721 217 HGKTDNELSKLSGVMKY-EYRV-ALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPL 284 (293)
Q Consensus 217 ~~~~~~~~~~~~e~l~~-e~~~-~~~~~~~~d~~egv~a~lv~k~r~P~w~~~~~~~v~~~~v~~~~~~~ 284 (293)
..++..-... =.+. .-+.+..+..++|+-.-. ++ -.|. +..-+...|+++++..+.-+
T Consensus 123 -------~p~L~~FV~~iL~rLi~kqvW~~~~lW~Gfi~C~-~~-~~p~-sf~~ll~LP~~ql~~~l~~~ 182 (183)
T PF12295_consen 123 -------YPSLRSFVSNILSRLIQKQVWKNKKLWEGFIKCA-KR-LKPS-SFPALLQLPPEQLEELLKKL 182 (183)
T ss_pred -------hhHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHH-HH-hhhH-HHHHHHhCCHHHHHHHHHhC
Confidence 1234333321 1222 233577899999998876 44 3451 12235778999988877543
No 159
>PTZ00293 thymidine kinase; Provisional
Probab=25.29 E-value=1.6e+02 Score=25.99 Aligned_cols=43 Identities=9% Similarity=0.013 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEE-----ECCccchhHHHHhhhcCeEE
Q 022721 3 EVFTAEYSLICKISEYKKPYISL-----MDGVTMGFGIGISGHGRYRI 45 (293)
Q Consensus 3 ~~~~~~~~l~~~i~~~~kPvIa~-----vnG~a~GgG~~lal~~D~ri 45 (293)
+||....++...+....+|||++ ..|.-+++-..|...||-++
T Consensus 87 QFf~~i~~~~~~l~~~g~~VivaGLd~Df~~~~F~~~~~Ll~~AD~V~ 134 (211)
T PTZ00293 87 QFFPDLVEFSEAAANLGKIVIVAALDGTFQRKPFGQILNLIPLAERVT 134 (211)
T ss_pred HhhHhHHHHHHHHHHCCCeEEEEecCcccccCcCccHHHHHHhhCEEE
Confidence 68888888999999999999998 56788888888888898765
No 160
>PF09713 A_thal_3526: Plant protein 1589 of unknown function (A_thal_3526); InterPro: IPR006476 This plant-specific family of proteins are defined by an uncharacterised region 57 residues in length. It is found toward the N terminus of most proteins that contain it. Examples include at least several proteins from Arabidopsis thaliana (Mouse-ear cress) and Oryza sativa (Rice). The function of the proteins are unknown.
Probab=22.22 E-value=1.7e+02 Score=20.09 Aligned_cols=43 Identities=19% Similarity=0.295 Sum_probs=25.2
Q ss_pred hHHHhhhCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCc
Q 022721 154 PQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAP 200 (293)
Q Consensus 154 ~~i~~~f~~~~t~~~i~~~l~~~~~~~~~~~~~~a~~~~~~i~~~sp 200 (293)
..|++|+-..-|-+|++..|.+.....+ .+..-+-++|.+..|
T Consensus 3 ~lIErCl~~yMsk~E~v~~L~~~a~I~P----~~T~~VW~~Le~eN~ 45 (54)
T PF09713_consen 3 NLIERCLQLYMSKEECVRALQKQANIEP----VFTSTVWQKLEKENP 45 (54)
T ss_pred hHHHHHHHHcCCHHHHHHHHHHHcCCCh----HHHHHHHHHHHHHCH
Confidence 4677888766688899988855432221 344444444444433
No 161
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=20.99 E-value=12 Score=33.50 Aligned_cols=91 Identities=21% Similarity=0.218 Sum_probs=55.0
Q ss_pred CCcEEEEECCccchhHHHHhhhcCeE-----EEeCCeEEeCcccCCCCCCCchHHHHHhcCCCcHHHHHHHhhcC-CCCC
Q 022721 19 KKPYISLMDGVTMGFGIGISGHGRYR-----IVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTG-KRIS 92 (293)
Q Consensus 19 ~kPvIa~vnG~a~GgG~~lal~~D~r-----iate~a~f~~pe~~lGl~p~~g~~~~l~r~~G~~~~a~~l~ltG-~~l~ 92 (293)
.|--| ++-|..+||++.+.++++.+ +.-|++..++|+..+-++-+.++. ++++++=.+ +-.-+-.-| .++.
T Consensus 147 dktki-vlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~~~k-~i~~lc~kn-~~~S~~ki~~~~~P 223 (300)
T KOG4391|consen 147 DKTKI-VLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPFPMK-YIPLLCYKN-KWLSYRKIGQCRMP 223 (300)
T ss_pred CcceE-EEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccchhh-HHHHHHHHh-hhcchhhhccccCc
Confidence 34443 34599999999999998652 344999999999998887554444 445433211 111111111 1222
Q ss_pred CHHHHHHcCccceeccCCChHHH
Q 022721 93 TPSDALFAGLGTDYVPSGNLGSL 115 (293)
Q Consensus 93 ~a~eA~~~Gl~~~~v~~~~l~~~ 115 (293)
-+.=.|+.|++||+-.....
T Consensus 224 ---~LFiSGlkDelVPP~~Mr~L 243 (300)
T KOG4391|consen 224 ---FLFISGLKDELVPPVMMRQL 243 (300)
T ss_pred ---eEEeecCccccCCcHHHHHH
Confidence 24566999999998654443
Done!