Your job contains 1 sequence.
>022727
MGERLTPGSYFQYPPSGVHASPHRSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLL
SQEIRRITGYNPSFVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQ
TPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRV
FIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKP
VDESLDHYKKQQLRELAMLNGTLREESPSMSPSMSPSMSPFNNAGMKRAKTGR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022727
(293 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024326 - symbol:AT1G09660 "AT1G09660" species... 1008 1.1e-101 1
UNIPROTKB|Q75GR5 - symbol:SPIN1 "KH domain-containing pro... 752 1.5e-74 1
TAIR|locus:2077818 - symbol:AT3G08620 "AT3G08620" species... 703 2.4e-69 1
TAIR|locus:2064097 - symbol:AT2G38610 "AT2G38610" species... 679 8.2e-67 1
TAIR|locus:2161845 - symbol:AT5G56140 "AT5G56140" species... 676 1.7e-66 1
FB|FBgn0264491 - symbol:how "held out wings" species:7227... 303 1.9e-33 2
UNIPROTKB|G5EFF1 - symbol:asd-2 "Protein ASD-2, isoform c... 294 9.0e-31 2
WB|WBGene00001595 - symbol:gld-1 species:6239 "Caenorhabd... 296 2.0e-30 2
UNIPROTKB|E1BP48 - symbol:KHDRBS2 "Uncharacterized protei... 268 2.6e-30 2
UNIPROTKB|E2QWN2 - symbol:KHDRBS2 "Uncharacterized protei... 268 4.2e-30 2
UNIPROTKB|Q5VWX1 - symbol:KHDRBS2 "KH domain-containing, ... 268 4.2e-30 2
UNIPROTKB|F1RZV6 - symbol:KHDRBS2 "Uncharacterized protei... 268 4.2e-30 2
MGI|MGI:2159649 - symbol:Khdrbs2 "KH domain containing, R... 268 8.6e-30 2
UNIPROTKB|E1BVW8 - symbol:KHDRBS2 "Uncharacterized protei... 268 1.1e-29 2
RGD|621738 - symbol:Khdrbs2 "KH domain containing, RNA bi... 268 1.1e-29 2
UNIPROTKB|F1N7N1 - symbol:QKI "Protein quaking" species:9... 328 1.3e-29 1
UNIPROTKB|Q5W9D7 - symbol:QKI "Protein quaking" species:9... 328 1.3e-29 1
UNIPROTKB|F1PLY2 - symbol:QKI "Protein quaking" species:9... 328 1.3e-29 1
UNIPROTKB|F1PX61 - symbol:QKI "Protein quaking" species:9... 328 1.3e-29 1
UNIPROTKB|J9NVZ6 - symbol:QKI "Protein quaking" species:9... 328 1.3e-29 1
UNIPROTKB|Q9GMY1 - symbol:QKI "Protein quaking" species:9... 328 1.3e-29 1
UNIPROTKB|F5GXS8 - symbol:QKI "Protein quaking" species:9... 328 1.3e-29 1
UNIPROTKB|F5GYM3 - symbol:QKI "Protein quaking" species:9... 328 1.3e-29 1
UNIPROTKB|Q96PU8 - symbol:QKI "Protein quaking" species:9... 328 1.3e-29 1
UNIPROTKB|F1SBW4 - symbol:QKI "Protein quaking" species:9... 328 1.3e-29 1
UNIPROTKB|Q5W9D5 - symbol:QKI "Protein quaking" species:9... 328 1.3e-29 1
MGI|MGI:97837 - symbol:Qk "quaking" species:10090 "Mus mu... 328 1.3e-29 1
RGD|1584886 - symbol:Qk "quaking" species:10116 "Rattus n... 328 1.3e-29 1
UNIPROTKB|D4A2X0 - symbol:Qk "Protein Qk" species:10116 "... 328 1.3e-29 1
UNIPROTKB|F1LMH5 - symbol:Qk "Protein Qk" species:10116 "... 328 1.3e-29 1
UNIPROTKB|F1NWU9 - symbol:QKI "Protein quaking" species:9... 327 1.6e-29 1
UNIPROTKB|F1NWV0 - symbol:QKI "Protein quaking" species:9... 327 1.6e-29 1
UNIPROTKB|Q9YH18 - symbol:QKI "Protein quaking" species:9... 327 1.6e-29 1
ZFIN|ZDB-GENE-081028-54 - symbol:qkib "QKI, KH domain con... 327 1.6e-29 1
WB|WBGene00006423 - symbol:asd-2 species:6239 "Caenorhabd... 294 1.7e-29 2
ZFIN|ZDB-GENE-040426-1462 - symbol:qki2 "QKI, KH domain c... 324 3.4e-29 1
ZFIN|ZDB-GENE-990415-230 - symbol:qkia "QKI, KH domain co... 322 8.2e-29 1
ZFIN|ZDB-GENE-061013-497 - symbol:khdrbs2 "KH domain cont... 262 2.5e-28 2
UNIPROTKB|A4FV24 - symbol:KHDRBS3 "Uncharacterized protei... 247 5.1e-26 2
UNIPROTKB|E2RLG8 - symbol:KHDRBS3 "Uncharacterized protei... 247 5.1e-26 2
UNIPROTKB|O75525 - symbol:KHDRBS3 "KH domain-containing, ... 247 5.1e-26 2
RGD|620921 - symbol:Khdrbs3 "KH domain containing, RNA bi... 247 1.3e-25 2
MGI|MGI:1313312 - symbol:Khdrbs3 "KH domain containing, R... 247 1.3e-25 2
FB|FBgn0034739 - symbol:CG3927 species:7227 "Drosophila m... 236 1.2e-24 2
TAIR|locus:2176222 - symbol:AT5G51300 species:3702 "Arabi... 288 2.8e-24 1
ZFIN|ZDB-GENE-040426-2344 - symbol:khdrbs1b "KH domain co... 235 3.9e-24 2
FB|FBgn0034659 - symbol:CG4021 species:7227 "Drosophila m... 234 6.2e-24 2
UNIPROTKB|E1C4N4 - symbol:KHDRBS1 "KH domain-containing, ... 233 1.1e-23 2
UNIPROTKB|J9NRH2 - symbol:KHDRBS1 "Uncharacterized protei... 233 1.2e-23 2
UNIPROTKB|Q29RQ2 - symbol:KHDRBS1 "Uncharacterized protei... 233 1.6e-23 2
UNIPROTKB|Q07666 - symbol:KHDRBS1 "KH domain-containing, ... 233 1.6e-23 2
UNIPROTKB|I3LP11 - symbol:LOC100739434 "Uncharacterized p... 233 1.6e-23 2
UNIPROTKB|F1PLD5 - symbol:KHDRBS1 "Uncharacterized protei... 233 1.6e-23 2
UNIPROTKB|E5RG12 - symbol:KHDRBS3 "KH domain-containing, ... 247 2.1e-23 2
UNIPROTKB|E5RJZ9 - symbol:KHDRBS3 "KH domain-containing, ... 247 2.1e-23 2
MGI|MGI:893579 - symbol:Khdrbs1 "KH domain containing, RN... 233 2.6e-23 2
RGD|621459 - symbol:Khdrbs1 "KH domain containing, RNA bi... 233 4.2e-23 2
UNIPROTKB|F1NLF2 - symbol:KHDRBS1 "KH domain-containing, ... 233 5.8e-23 2
FB|FBgn0034740 - symbol:nsr "novel spermatogenesis regula... 221 7.8e-23 2
UNIPROTKB|F1P522 - symbol:QKI "Protein quaking" species:9... 264 7.8e-23 1
FB|FBgn0022984 - symbol:qkr58E-3 "quaking related 58E-3" ... 218 8.8e-23 2
UNIPROTKB|Q8UUW7 - symbol:KHDRBS1 "KH domain-containing, ... 233 2.5e-22 2
WB|WBGene00022101 - symbol:Y69A2AR.32 species:6239 "Caeno... 258 3.4e-22 1
ZFIN|ZDB-GENE-000210-25 - symbol:khdrbs1a "KH domain cont... 215 4.1e-21 2
UNIPROTKB|F1NKE9 - symbol:KHDRBS3 "Uncharacterized protei... 247 4.9e-21 1
UNIPROTKB|F1RRV9 - symbol:KHDRBS3 "Uncharacterized protei... 247 4.9e-21 1
UNIPROTKB|I3LAN7 - symbol:LOC100625959 "Uncharacterized p... 247 4.9e-21 1
UNIPROTKB|F5H8C8 - symbol:QKI "Protein quaking" species:9... 244 1.0e-20 1
DICTYBASE|DDB_G0293554 - symbol:sf1 "CCHC-type zinc finge... 250 1.2e-20 1
WB|WBGene00044674 - symbol:B0280.17 species:6239 "Caenorh... 234 1.2e-19 1
FB|FBgn0022985 - symbol:qkr58E-2 "quaking related 58E-2" ... 212 1.2e-19 2
FB|FBgn0022987 - symbol:qkr54B "quaking related 54B" spec... 236 2.3e-19 1
RGD|620645 - symbol:Sf1 "splicing factor 1" species:10116... 230 3.1e-19 1
SGD|S000004106 - symbol:MSL5 "Component of the commitment... 235 4.3e-19 1
UNIPROTKB|B4DX42 - symbol:SF1 "Splicing factor 1" species... 230 1.1e-18 1
UNIPROTKB|F1LM37 - symbol:Sf1 "Protein Sf1" species:10116... 230 2.2e-18 1
UNIPROTKB|E2RRT4 - symbol:SF1 "Uncharacterized protein" s... 230 3.1e-18 1
UNIPROTKB|A2VDM7 - symbol:SF1 "Uncharacterized protein" s... 230 3.1e-18 1
UNIPROTKB|Q15637 - symbol:SF1 "Splicing factor 1" species... 230 3.1e-18 1
UNIPROTKB|F1RQR0 - symbol:SF1 "Uncharacterized protein" s... 230 3.1e-18 1
MGI|MGI:1095403 - symbol:Sf1 "splicing factor 1" species:... 230 3.2e-18 1
UNIPROTKB|F1LSC3 - symbol:Sf1 "Protein Sf1" species:10116... 230 3.2e-18 1
POMBASE|SPCC962.06c - symbol:bpb1 "zinc finger splicing f... 226 7.0e-18 1
ZFIN|ZDB-GENE-030131-2492 - symbol:sf1 "splicing factor 1... 226 8.9e-18 1
WB|WBGene00019509 - symbol:K07H8.9 species:6239 "Caenorha... 212 2.5e-17 1
CGD|CAL0004717 - symbol:orf19.329 species:5476 "Candida a... 218 2.8e-17 1
UNIPROTKB|K7GNY3 - symbol:KHDRBS3 "Uncharacterized protei... 211 3.2e-17 1
FB|FBgn0034731 - symbol:CG10384 species:7227 "Drosophila ... 216 5.1e-17 1
FB|FBgn0025571 - symbol:SF1 "Splicing factor 1" species:7... 220 5.3e-17 1
ASPGD|ASPL0000074583 - symbol:AN10615 species:162425 "Eme... 210 3.3e-16 1
WB|WBGene00013808 - symbol:sfa-1 species:6239 "Caenorhabd... 209 6.5e-16 1
GENEDB_PFALCIPARUM|PFF1135w - symbol:PFF1135w "transcript... 207 8.6e-16 1
UNIPROTKB|C6KT72 - symbol:PFF1135w "Transcription or spli... 207 8.6e-16 1
FB|FBgn0022986 - symbol:qkr58E-1 "quaking related 58E-1" ... 203 2.5e-15 1
UNIPROTKB|H0YAQ3 - symbol:KHDRBS3 "KH domain-containing, ... 191 4.2e-15 1
WB|WBGene00013325 - symbol:Y57G11C.36 species:6239 "Caeno... 173 6.6e-11 1
UNIPROTKB|H0YAQ1 - symbol:KHDRBS3 "KH domain-containing, ... 139 2.2e-08 1
>TAIR|locus:2024326 [details] [associations]
symbol:AT1G09660 "AT1G09660" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR004087 PROSITE:PS50084 SMART:SM00322 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003723
eggNOG:COG5176 EMBL:AC000132 KO:K14945 HSSP:Q32NN2
HOGENOM:HOG000238548 EMBL:AK118683 EMBL:AF419590 EMBL:AY079111
EMBL:BX842524 EMBL:AK175370 EMBL:AK175796 EMBL:AK176267
EMBL:AK176765 EMBL:AK176899 IPI:IPI00517028 IPI:IPI00535968
PIR:D86230 PIR:E86230 RefSeq:NP_172437.2 RefSeq:NP_973800.1
UniGene:At.10221 ProteinModelPortal:Q8GWR3 SMR:Q8GWR3 IntAct:Q8GWR3
EnsemblPlants:AT1G09660.1 GeneID:837494 KEGG:ath:AT1G09660
TAIR:At1g09660 InParanoid:Q8GWR3 OMA:VEASTQC PhylomeDB:Q8GWR3
ProtClustDB:CLSN2690390 Genevestigator:Q8GWR3 Uniprot:Q8GWR3
Length = 298
Score = 1008 (359.9 bits), Expect = 1.1e-101, P = 1.1e-101
Identities = 198/293 (67%), Positives = 230/293 (78%)
Query: 1 MGERLTPGSYFQYPPSGVHASPHRSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLL 60
M ER++PGS+FQYP SG ASP+RS P DRERYL ELL ERQKLGPF+QV+P C RLL
Sbjct: 11 MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70
Query: 61 SQEIRRITGYNPSFVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQ 120
+ EIRR++ SF D +R+EH SPFRSLGQP +DLEG S MQ EEN HLQR +PF+
Sbjct: 71 NHEIRRVS----SFPDLDRYEHGSPFRSLGQPTNGKLDLEGWSMMQAEENCHLQRASPFR 126
Query: 121 TPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRV 180
P +GW G+PG+P P+VK+VIRLDVPVDKYP++NFVGRILGPRGNSLKRVE T CRV
Sbjct: 127 GPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRV 186
Query: 181 FIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKP 240
FIRGRGSVKD++KEEKLK KPGYEHL EPLHVL+EAE PEDIINSRL+HAV LE+LLKP
Sbjct: 187 FIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKP 246
Query: 241 VDESLDHYKKQQLRELAMLNGTLREEXXXXXXX--XXXXXXXFNNAGMKRAKT 291
+DES+DHYK++QL+ELA LNGTLREE FN+ KRAKT
Sbjct: 247 MDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNS---KRAKT 296
>UNIPROTKB|Q75GR5 [details] [associations]
symbol:SPIN1 "KH domain-containing protein SPIN1"
species:39947 "Oryza sativa Japonica Group" [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0048577 "negative regulation of short-day
photoperiodism, flowering" evidence=IMP] [GO:0048579 "negative
regulation of long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 GO:GO:0003723 GO:GO:0009908 GO:GO:0048577 HSSP:Q9BW01
eggNOG:COG5176 EMBL:CM000140 GO:GO:0048579 KO:K14945 OMA:IMRVSSI
EMBL:AC139172 EMBL:AK065405 RefSeq:NP_001051685.1 UniGene:Os.5675
ProteinModelPortal:Q75GR5 EnsemblPlants:LOC_Os03g60110.1
GeneID:4334557 KEGG:dosa:Os01t0886300-01 KEGG:dosa:Os03t0815700-01
KEGG:osa:4334557 Gramene:Q75GR5 ProtClustDB:CLSN2694450
Uniprot:Q75GR5
Length = 281
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 162/278 (58%), Positives = 196/278 (70%)
Query: 21 SPH-RSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRITG--YNPSFVDH 77
SP RS+ +D + YLAELLAE QKLGPF+QVLP+CS+LLSQEI R++ +N F D
Sbjct: 16 SPQIRSNPTDVDSQ-YLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNHGFGDF 74
Query: 78 ERFEHDSPFRSLGQPNGRP-MDLEGLSAMQTEENG-HLQRMAPFQTPPSMGWQGIPGIPT 135
+R SP + PN R G S NG H +R+ F SM WQG P P+
Sbjct: 75 DRHRFRSP-SPMSSPNPRSNRSGNGFSPW----NGLHQERLG-FPQGTSMDWQGAPPSPS 128
Query: 136 TPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEE 195
+ VVK+++RLDVPVD YPNFNFVGRILGPRGNSLKRVEA T CRVFIRG+GS+KD KE+
Sbjct: 129 SHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGKED 188
Query: 196 KLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 255
KL+ KPGYEHL++PLH+L+EAEFP II++RL HA ++E LLKPVDES D YK+QQLRE
Sbjct: 189 KLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKRQQLRE 248
Query: 256 LAMLNGTLREEXXXXXXXXXXXXXXFNNAGMKRAKTGR 293
LAMLN TLRE+ F+N GMKRAKTG+
Sbjct: 249 LAMLNSTLREDSPHPGSVSP-----FSNGGMKRAKTGQ 281
>TAIR|locus:2077818 [details] [associations]
symbol:AT3G08620 "AT3G08620" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0010048 "vernalization response" evidence=RCA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC012562 eggNOG:COG5176 KO:K14945 HSSP:Q32NN2
HOGENOM:HOG000238548 ProtClustDB:CLSN2683215 EMBL:AK117438
IPI:IPI00536963 RefSeq:NP_187474.2 UniGene:At.40250
ProteinModelPortal:Q8GYR4 SMR:Q8GYR4 PaxDb:Q8GYR4 PRIDE:Q8GYR4
EnsemblPlants:AT3G08620.1 GeneID:820009 KEGG:ath:AT3G08620
TAIR:At3g08620 InParanoid:Q9C9Z4 OMA:IFRITGM PhylomeDB:Q8GYR4
Genevestigator:Q8GYR4 Uniprot:Q8GYR4
Length = 283
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 156/292 (53%), Positives = 193/292 (66%)
Query: 9 SYFQYPPSGVHASPH-RSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRI 67
+Y + PS ASP R+ S +D + Y+++LLAE QKLGPF+QVLP+CSRLL+QEI RI
Sbjct: 6 NYNNFSPSRA-ASPQIRTPSSDVDSQ-YISQLLAEHQKLGPFMQVLPICSRLLNQEIFRI 63
Query: 68 TGYNPS--FVDHERFEHDSPFRSLGQPNGRPM----DLEGLSAMQTEENGHLQRMAPFQT 121
TG P+ F D +R H SP + PN L G + + E G MA
Sbjct: 64 TGMMPNQGFTDFDRLRHRSP-SPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMA---- 118
Query: 122 PPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVF 181
M WQG P P++ VKR++RLD+PVD YPNFNFVGR+LGPRGNSLKRVEA T CRV+
Sbjct: 119 ---MEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVY 175
Query: 182 IRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPV 241
IRG+GS+KD KEEKLK KPGYEHLNE LH+L+EA+ P DI++ +L A I+E L+KPV
Sbjct: 176 IRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPV 235
Query: 242 DESLDHYKKQQLRELAMLNGTLREEXXXXXXXXXXXXXXFNNAGMKRAKTGR 293
DES D+ K+QQLRELA+LN LRE FN+ MKR KTGR
Sbjct: 236 DESQDYIKRQQLRELALLNSNLRENSPGPSGSVSP----FNSNAMKRPKTGR 283
>TAIR|locus:2064097 [details] [associations]
symbol:AT2G38610 "AT2G38610" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC005499 eggNOG:COG5176 KO:K14945 HSSP:Q32NN2
HOGENOM:HOG000238548 EMBL:AY042804 EMBL:AY064682 EMBL:AY065112
EMBL:BT000084 IPI:IPI00520364 PIR:B84807 RefSeq:NP_181395.1
RefSeq:NP_850296.1 UniGene:At.23456 ProteinModelPortal:Q9ZVI3
SMR:Q9ZVI3 IntAct:Q9ZVI3 PaxDb:Q9ZVI3 PRIDE:Q9ZVI3
EnsemblPlants:AT2G38610.1 EnsemblPlants:AT2G38610.2 GeneID:818443
KEGG:ath:AT2G38610 TAIR:At2g38610 InParanoid:Q9ZVI3 OMA:IMRVSSI
PhylomeDB:Q9ZVI3 ProtClustDB:CLSN2683215 Genevestigator:Q9ZVI3
Uniprot:Q9ZVI3
Length = 286
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 150/287 (52%), Positives = 184/287 (64%)
Query: 9 SYFQYPPSGVHASPHRSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRIT 68
SYF P+ ASP S+ +D +YL ELLAE QKL PF+QVLP+CSRLL+QE+ R++
Sbjct: 9 SYFS--PARA-ASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVS 65
Query: 69 GY--NPSFVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMG 126
G N F D +R H SP + GL NG Q +M
Sbjct: 66 GMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGW----NGLSQERLSGTPGMTMD 121
Query: 127 WQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRG 186
WQG PG P++ VKR++RL++PVD YPNFNFVGR+LGPRGNSLKRVEA T CRVFIRG+G
Sbjct: 122 WQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKG 181
Query: 187 SVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLD 246
S+KD KE+KL+ +PGYEHLNE LH+L+EA+ P I+ RL A I+E LLKPVDES D
Sbjct: 182 SIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQD 241
Query: 247 HYKKQQLRELAMLNGT-LREEXXXXXXXXXXXXXXFNNAGMKRAKTG 292
K+QQLRELA+LN LREE FN++G KR KTG
Sbjct: 242 FIKRQQLRELALLNSNNLREESPGPSGGGSVSP--FNSSG-KRPKTG 285
>TAIR|locus:2161845 [details] [associations]
symbol:AT5G56140 "AT5G56140" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR004087 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003723 EMBL:AB011476
eggNOG:COG5176 KO:K14945 HSSP:Q32NN2 EMBL:AY080852 EMBL:BT000873
IPI:IPI00544767 RefSeq:NP_200425.1 UniGene:At.29404
ProteinModelPortal:Q9FKT4 SMR:Q9FKT4 PRIDE:Q9FKT4
EnsemblPlants:AT5G56140.1 GeneID:835713 KEGG:ath:AT5G56140
TAIR:At5g56140 HOGENOM:HOG000238548 InParanoid:Q9FKT4 OMA:AKRTIRV
PhylomeDB:Q9FKT4 ProtClustDB:CLSN2916672 Genevestigator:Q9FKT4
Uniprot:Q9FKT4
Length = 315
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 151/298 (50%), Positives = 191/298 (64%)
Query: 2 GERLTPGSYFQYPPSGVHASPHRS------SSLPLDRERYLAELLAERQKLGPFVQVLPL 55
G +T S PPS SP+ S SS+ +++E+YL+ELLAER KL PF+ VLP
Sbjct: 27 GRFMTYSSSLSVPPSAPQ-SPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPH 85
Query: 56 CSRLLSQEIRRITGY--NPSFVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHL 113
RLL+QEI R+T N + + +H SP S G D+ G ++ E
Sbjct: 86 AFRLLNQEILRVTTLLENATVLSQSGLDHPSPLASGGIFQNARADMNGWASQFPSE---- 141
Query: 114 QRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVE 173
R P + P W PG + + KR IR+D+PVD YPNFNFVGR+LGPRGNSLKRVE
Sbjct: 142 -RSVP--SSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVE 198
Query: 174 AMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAI 233
A T+CRV IRGRGS+KD IKEE ++ KPGYEHLNEPLH+LVEAE P +I+++RL A I
Sbjct: 199 ASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREI 258
Query: 234 LENLLKPVDESLDHYKKQQLRELAMLNGTLREEXXXXXXXXXXXXXXFNNAGMKRAKT 291
L++LL P++E+ D YKKQQLRELA+LNGTLREE +N+ GMKRAKT
Sbjct: 259 LDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGSVSP----YNSLGMKRAKT 312
>FB|FBgn0264491 [details] [associations]
symbol:how "held out wings" species:7227 "Drosophila
melanogaster" [GO:0007525 "somatic muscle development"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC;NAS;IDA]
[GO:0008016 "regulation of heart contraction" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0007521
"muscle cell fate determination" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0007475 "apposition of dorsal and ventral
imaginal disc-derived wing surfaces" evidence=IMP] [GO:0003729
"mRNA binding" evidence=NAS;IDA] [GO:0007498 "mesoderm development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
[GO:0008347 "glial cell migration" evidence=IMP] [GO:0008366 "axon
ensheathment" evidence=IMP] [GO:0007438 "oenocyte development"
evidence=IMP] [GO:0003730 "mRNA 3'-UTR binding" evidence=IDA]
[GO:0008078 "mesodermal cell migration" evidence=IMP] [GO:0045214
"sarcomere organization" evidence=IMP] [GO:0007284 "spermatogonial
cell division" evidence=IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 EMBL:AE014297
GO:GO:0005634 GO:GO:0007155 GO:GO:0008016 GO:GO:0007438
GO:GO:0016203 GO:GO:0003730 GO:GO:0045214 GO:GO:0030718
GO:GO:0008078 GO:GO:0008347 GO:GO:0007475 GO:GO:0007284
eggNOG:COG5176 GeneTree:ENSGT00550000074434 GO:GO:0007525
GO:GO:0000381 GO:GO:0008366 EMBL:U85651 EMBL:U72331 EMBL:AF003106
EMBL:AF003107 EMBL:U87150 EMBL:AY069862 RefSeq:NP_001027203.1
RefSeq:NP_001163683.1 RefSeq:NP_001163684.1 RefSeq:NP_524447.2
RefSeq:NP_732695.1 UniGene:Dm.20227 ProteinModelPortal:O01367
SMR:O01367 IntAct:O01367 MINT:MINT-307488 STRING:O01367
PaxDb:O01367 PRIDE:O01367 EnsemblMetazoa:FBtr0084177
EnsemblMetazoa:FBtr0301401 GeneID:42596 KEGG:dme:Dmel_CG10293
CTD:42596 FlyBase:FBgn0017397 InParanoid:O01367 KO:K14945
OMA:SLFQING OrthoDB:EOG4FJ6RD PhylomeDB:O01367 ChiTaRS:how
GenomeRNAi:42596 NextBio:829604 Bgee:O01367 GermOnline:CG10293
GO:GO:0007521 Uniprot:O01367
Length = 405
Score = 303 (111.7 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 61/132 (46%), Positives = 89/132 (67%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIK 193
P VV ++ VPV ++P+FNFVGRILGPRG + K++E T C++ +RG+GS++D K
Sbjct: 130 PEGSVVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKK 189
Query: 194 EEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQL 253
E+ + KP +EHL++ LHVL+ E E+ +L AVA ++ LL P E D KK+QL
Sbjct: 190 EDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQL 249
Query: 254 RELAMLNGTLRE 265
ELA++NGT R+
Sbjct: 250 MELAIINGTYRD 261
Score = 77 (32.2 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 14 PPSGVHASPHRSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRI 67
P + H +P + YLA+LL +R++L F V RLL +EI R+
Sbjct: 57 PMTPQHLTPQQQQQSTQSIADYLAQLLKDRKQLAAFPNVFTHVERLLDEEIARV 110
>UNIPROTKB|G5EFF1 [details] [associations]
symbol:asd-2 "Protein ASD-2, isoform c" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0007411 GO:GO:0002119 GO:GO:0003727
GO:GO:0040017 GO:GO:0007413 GO:GO:0097157
GeneTree:ENSGT00550000074434 GO:GO:0000381 GO:GO:0043186
EMBL:FO080897 UniGene:Cel.16725 GeneID:188703 KEGG:cel:CELE_T21G5.5
CTD:188703 EMBL:EF630626 RefSeq:NP_001021627.1 SMR:G5EFF1
IntAct:G5EFF1 EnsemblMetazoa:T21G5.5c WormBase:T21G5.5c
NextBio:939786 Uniprot:G5EFF1
Length = 445
Score = 294 (108.6 bits), Expect = 9.0e-31, Sum P(2) = 9.0e-31
Identities = 57/118 (48%), Positives = 81/118 (68%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHL 206
VP ++P++NFVGRILGPRG + K++E T C++ +RGRGS++D KEE + KP +EHL
Sbjct: 136 VPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEELNRGKPNWEHL 195
Query: 207 NEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLR 264
+E LHVL++ E E+ +L AV + LL P E D K++QL ELA++NGT R
Sbjct: 196 SEELHVLIQCEDTENRAKVKLMRAVEEVRKLLVPAPEGEDDLKRKQLMELAIINGTYR 253
Score = 63 (27.2 bits), Expect = 9.0e-31, Sum P(2) = 9.0e-31
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 15 PSGVHASPHRSSSLPLDRE---RYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRI 67
PSGV + S ++ YL++LL ++++L F V RL +EI ++
Sbjct: 49 PSGVQSGSANGVSTSQQQQYSAEYLSQLLKDKKQLAAFPNVFHHLERLADEEINKV 104
>WB|WBGene00001595 [details] [associations]
symbol:gld-1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0042127 "regulation of
cell proliferation" evidence=IMP] [GO:0040020 "regulation of
meiosis" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0051729 "germline cell cycle switching, mitotic to meiotic cell
cycle" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0043186 "P
granule" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] [GO:0003727
"single-stranded RNA binding" evidence=IDA] [GO:0048027 "mRNA
5'-UTR binding" evidence=IDA] [GO:0017148 "negative regulation of
translation" evidence=IMP] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005829
GO:GO:0009792 GO:GO:0007126 GO:GO:0006898 GO:GO:0030154
GO:GO:0017148 GO:GO:0003727 GO:GO:0048477 GO:GO:0051729
GO:GO:0042127 GO:GO:0048027 GO:GO:0003730 GO:GO:0040027
GO:GO:0040020 eggNOG:COG5176 GeneTree:ENSGT00550000074434
EMBL:Z81130 EMBL:U20535 PIR:T25193 RefSeq:NP_492143.1 PDB:3K6T
PDB:3KBL PDBsum:3K6T PDBsum:3KBL ProteinModelPortal:Q17339
SMR:Q17339 DIP:DIP-24870N IntAct:Q17339 MINT:MINT-1054588
STRING:Q17339 PaxDb:Q17339 EnsemblMetazoa:T23G11.3.1
EnsemblMetazoa:T23G11.3.2 GeneID:172532 KEGG:cel:CELE_T23G11.3
UCSC:T23G11.3 CTD:172532 WormBase:T23G11.3 HOGENOM:HOG000015966
InParanoid:Q17339 OMA:TENRVHL BindingDB:Q17339 ChEMBL:CHEMBL1293302
EvolutionaryTrace:Q17339 NextBio:875927 GermOnline:T23G11.3
Uniprot:Q17339
Length = 463
Score = 296 (109.3 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 65/170 (38%), Positives = 104/170 (61%)
Query: 96 PMDLEGLSAMQTEENGHLQRMAPFQTP-PSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPN 154
P + + +E G + R+A FQT P + +P P ++ ++ VP ++YP+
Sbjct: 164 PHMFSNVERLLDDEIGRV-RVALFQTEFPRVE---LPE-PAGDMISITEKIYVPKNEYPD 218
Query: 155 FNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLV 214
+NFVGRILGPRG + K++E T C++ +RG+GS++D KE + K +EHL + LHVLV
Sbjct: 219 YNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRGKANWEHLEDDLHVLV 278
Query: 215 EAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLR 264
+ E E+ ++ +L A+ ++ LL P E D K++QL ELA++NGT R
Sbjct: 279 QCEDTENRVHIKLQAALEQVKKLLIPAPEGTDELKRKQLMELAIINGTYR 328
Score = 60 (26.2 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 6 TPGSYFQYPPSGVHASPHRSSSLPLDRE-RYLAELLAERQKLGPFVQVLPLCSRLLSQEI 64
TP SY + SP + + ++ YLA+L+ E++ L F + RLL EI
Sbjct: 119 TPMSYGKSSMDKSLFSPTATEPIEVEATVEYLADLVKEKKHLTLFPHMFSNVERLLDDEI 178
Query: 65 RRI 67
R+
Sbjct: 179 GRV 181
>UNIPROTKB|E1BP48 [details] [associations]
symbol:KHDRBS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0008266 "poly(U)
RNA binding" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0008266
GeneTree:ENSGT00550000074434 GO:GO:0008143 CTD:202559 OMA:PPIARGV
EMBL:DAAA02054729 EMBL:DAAA02054730 EMBL:DAAA02054731
EMBL:DAAA02054732 EMBL:DAAA02054733 EMBL:DAAA02054734
EMBL:DAAA02054735 EMBL:DAAA02054736 EMBL:DAAA02054737
EMBL:DAAA02054738 EMBL:DAAA02054739 EMBL:DAAA02054740
EMBL:DAAA02054741 EMBL:DAAA02054742 EMBL:DAAA02054743
EMBL:DAAA02054744 EMBL:DAAA02054745 EMBL:DAAA02054746
IPI:IPI00913818 RefSeq:XP_002697212.1 Ensembl:ENSBTAT00000061105
GeneID:789972 KEGG:bta:789972 NextBio:20929992 Uniprot:E1BP48
Length = 348
Score = 268 (99.4 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
Identities = 58/127 (45%), Positives = 86/127 (67%)
Query: 139 VKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK 198
+K R+ +PV +YP FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+
Sbjct: 58 IKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELR 117
Query: 199 DKPG---YEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 255
K G Y HL++ LHVL+E P SR+ HA+ ++ L P D + D +++QLRE
Sbjct: 118 -KSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP-DYN-DEIRQEQLRE 174
Query: 256 LAMLNGT 262
L+ LNG+
Sbjct: 175 LSYLNGS 181
Score = 82 (33.9 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 30 LDRERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHE 78
++ E+YL EL+AER L P FV SRLL++EI + G + D E
Sbjct: 1 MEEEKYLPELMAERDSLDPSFVHA----SRLLAEEIEKFQGSDGKSEDEE 46
>UNIPROTKB|E2QWN2 [details] [associations]
symbol:KHDRBS2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=IEA] [GO:0017124 "SH3 domain binding" evidence=IEA]
[GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0008266 GeneTree:ENSGT00550000074434 GO:GO:0008143 CTD:202559
OMA:PPIARGV EMBL:AAEX03008417 EMBL:AAEX03008418 EMBL:AAEX03008419
RefSeq:XP_538980.2 ProteinModelPortal:E2QWN2
Ensembl:ENSCAFT00000003891 GeneID:481859 KEGG:cfa:481859
NextBio:20856585 Uniprot:E2QWN2
Length = 349
Score = 268 (99.4 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 58/127 (45%), Positives = 86/127 (67%)
Query: 139 VKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK 198
+K R+ +PV +YP FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+
Sbjct: 58 IKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELR 117
Query: 199 DKPG---YEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 255
K G Y HL++ LHVL+E P SR+ HA+ ++ L P D + D +++QLRE
Sbjct: 118 -KSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP-DYN-DEIRQEQLRE 174
Query: 256 LAMLNGT 262
L+ LNG+
Sbjct: 175 LSYLNGS 181
Score = 80 (33.2 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 30 LDRERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHER 79
++ E+YL EL+AE+ L P FV SRLL++EI + G + D E+
Sbjct: 1 MEEEKYLPELMAEKDSLDPSFVHA----SRLLAEEIEKFQGSDGKKEDEEK 47
>UNIPROTKB|Q5VWX1 [details] [associations]
symbol:KHDRBS2 "KH domain-containing, RNA-binding, signal
transduction-associated protein 2" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0008266 GO:GO:0006355 GO:GO:0006351
eggNOG:COG5176 GO:GO:0008143 HOGENOM:HOG000230771
HOVERGEN:HBG079164 CTD:202559 OMA:PPIARGV OrthoDB:EOG418BP2
EMBL:AY077838 EMBL:AK292043 EMBL:AL360220 EMBL:AL049544
EMBL:AL138882 EMBL:AL355347 EMBL:AL391644 EMBL:Z93021 EMBL:CH471143
EMBL:BC034043 IPI:IPI00166708 RefSeq:NP_689901.2 UniGene:Hs.519794
HSSP:Q32NN2 ProteinModelPortal:Q5VWX1 SMR:Q5VWX1 IntAct:Q5VWX1
MINT:MINT-1449914 STRING:Q5VWX1 PhosphoSite:Q5VWX1 DMDM:74762274
PaxDb:Q5VWX1 PRIDE:Q5VWX1 DNASU:202559 Ensembl:ENST00000281156
GeneID:202559 KEGG:hsa:202559 UCSC:uc003peg.2 GeneCards:GC06M062447
H-InvDB:HIX0005989 HGNC:HGNC:18114 HPA:HPA029392 MIM:610487
neXtProt:NX_Q5VWX1 PharmGKB:PA30093 InParanoid:Q5VWX1
PhylomeDB:Q5VWX1 GenomeRNAi:202559 NextBio:90301
ArrayExpress:Q5VWX1 Bgee:Q5VWX1 CleanEx:HS_KHDRBS2
Genevestigator:Q5VWX1 Uniprot:Q5VWX1
Length = 349
Score = 268 (99.4 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 58/127 (45%), Positives = 86/127 (67%)
Query: 139 VKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK 198
+K R+ +PV +YP FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+
Sbjct: 58 IKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELR 117
Query: 199 DKPG---YEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 255
K G Y HL++ LHVL+E P SR+ HA+ ++ L P D + D +++QLRE
Sbjct: 118 -KSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP-DYN-DEIRQEQLRE 174
Query: 256 LAMLNGT 262
L+ LNG+
Sbjct: 175 LSYLNGS 181
Score = 80 (33.2 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 30 LDRERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHER 79
++ E+YL EL+AE+ L P FV SRLL++EI + G + D E+
Sbjct: 1 MEEEKYLPELMAEKDSLDPSFVHA----SRLLAEEIEKFQGSDGKKEDEEK 47
>UNIPROTKB|F1RZV6 [details] [associations]
symbol:KHDRBS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0008266 "poly(U)
RNA binding" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0008266
GeneTree:ENSGT00550000074434 GO:GO:0008143 OMA:PPIARGV
EMBL:CT797468 EMBL:CT961061 EMBL:CU407231 EMBL:CU570917
EMBL:FP565898 Ensembl:ENSSSCT00000001662 Uniprot:F1RZV6
Length = 277
Score = 268 (99.4 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 58/127 (45%), Positives = 86/127 (67%)
Query: 139 VKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK 198
+K R+ +PV +YP FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+
Sbjct: 58 IKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELR 117
Query: 199 DKPG---YEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 255
K G Y HL++ LHVL+E P SR+ HA+ ++ L P D + D +++QLRE
Sbjct: 118 -KSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP-DYN-DEIRQEQLRE 174
Query: 256 LAMLNGT 262
L+ LNG+
Sbjct: 175 LSYLNGS 181
Score = 80 (33.2 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 30 LDRERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHER 79
++ E+YL EL+AE+ L P FV SRLL++EI + G + D E+
Sbjct: 1 MEEEKYLPELMAEKDSLDPSFVHA----SRLLAEEIEKFQGSDGKKEDEEK 47
>MGI|MGI:2159649 [details] [associations]
symbol:Khdrbs2 "KH domain containing, RNA binding, signal
transduction associated 2" species:10090 "Mus musculus" [GO:0003723
"RNA binding" evidence=IEA] [GO:0005070 "SH3/SH2 adaptor activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IDA] [GO:0008266
"poly(U) RNA binding" evidence=IDA] [GO:0017124 "SH3 domain
binding" evidence=IDA] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IDA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 MGI:MGI:2159649 GO:GO:0005634
GO:GO:0008266 GO:GO:0006355 GO:GO:0005070 GO:GO:0017124
GO:GO:0006351 GO:GO:0042169 GO:GO:0046982 eggNOG:COG5176
GeneTree:ENSGT00550000074434 GO:GO:0008143 HOGENOM:HOG000230771
HOVERGEN:HBG079164 CTD:202559 OMA:PPIARGV OrthoDB:EOG418BP2
HSSP:Q32NN2 EMBL:AF098796 EMBL:BC066814 EMBL:BC132117 EMBL:BC132119
IPI:IPI00322691 IPI:IPI00874354 RefSeq:NP_573498.1
UniGene:Mm.336594 ProteinModelPortal:Q9WU01 SMR:Q9WU01
STRING:Q9WU01 PhosphoSite:Q9WU01 PaxDb:Q9WU01 PRIDE:Q9WU01
Ensembl:ENSMUST00000027226 GeneID:170771 KEGG:mmu:170771
UCSC:uc007ano.1 UCSC:uc007anp.1 InParanoid:Q9WU01 ChiTaRS:KHDRBS2
NextBio:370395 Bgee:Q9WU01 Genevestigator:Q9WU01 Uniprot:Q9WU01
Length = 349
Score = 268 (99.4 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 58/127 (45%), Positives = 86/127 (67%)
Query: 139 VKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK 198
+K R+ +PV +YP FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+
Sbjct: 58 IKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKTKEEELR 117
Query: 199 DKPG---YEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 255
K G Y HL++ LHVL+E P SR+ HA+ ++ L P D + D +++QLRE
Sbjct: 118 -KSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP-DYN-DEIRQEQLRE 174
Query: 256 LAMLNGT 262
L+ LNG+
Sbjct: 175 LSYLNGS 181
Score = 77 (32.2 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 30 LDRERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHER 79
+ E+YL EL+AE+ L P FV SRLL++EI + G + D E+
Sbjct: 1 MGEEKYLPELMAEKDSLDPSFVHA----SRLLAEEIEKFQGSDGKKEDEEK 47
>UNIPROTKB|E1BVW8 [details] [associations]
symbol:KHDRBS2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0008266
GeneTree:ENSGT00550000074434 GO:GO:0008143 CTD:202559 OMA:PPIARGV
EMBL:AADN02002672 EMBL:AADN02002673 EMBL:AADN02002674
EMBL:AADN02002675 EMBL:AADN02002676 EMBL:AADN02002677
EMBL:AADN02002678 EMBL:AADN02002679 EMBL:AADN02002680
IPI:IPI00593041 RefSeq:XP_426201.2 UniGene:Gga.14902
Ensembl:ENSGALT00000026242 GeneID:428643 KEGG:gga:428643
NextBio:20829580 Uniprot:E1BVW8
Length = 348
Score = 268 (99.4 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 58/127 (45%), Positives = 86/127 (67%)
Query: 139 VKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK 198
+K R+ +PV +YP FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+
Sbjct: 58 IKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELR 117
Query: 199 DKPG---YEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 255
K G Y HL++ LHVL+E P SR+ HA+ ++ L P D + D +++QLRE
Sbjct: 118 -KSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP-DYN-DEIRQEQLRE 174
Query: 256 LAMLNGT 262
L+ LNG+
Sbjct: 175 LSYLNGS 181
Score = 76 (31.8 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 30 LDRERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHER 79
+++E+YL EL+AE+ L P FV + RLL+ EI + G D E+
Sbjct: 1 MEQEKYLPELMAEKDSLDPSFVHAM----RLLADEIEKFQGSEGKKEDEEK 47
>RGD|621738 [details] [associations]
symbol:Khdrbs2 "KH domain containing, RNA binding, signal
transduction associated 2" species:10116 "Rattus norvegicus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA;ISO] [GO:0008266 "poly(U) RNA binding"
evidence=IEA;ISO] [GO:0017124 "SH3 domain binding"
evidence=IEA;ISO] [GO:0042169 "SH2 domain binding"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA;ISO] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 RGD:621738 GO:GO:0005634
GO:GO:0008266 GO:GO:0006355 GO:GO:0006351 eggNOG:COG5176
GeneTree:ENSGT00550000074434 GO:GO:0008143 HOGENOM:HOG000230771
HOVERGEN:HBG079164 CTD:202559 OMA:PPIARGV OrthoDB:EOG418BP2
HSSP:Q32NN2 EMBL:AF305618 IPI:IPI00200486 RefSeq:NP_579852.1
UniGene:Rn.154423 ProteinModelPortal:Q920F3 STRING:Q920F3
PhosphoSite:Q920F3 PRIDE:Q920F3 Ensembl:ENSRNOT00000016578
GeneID:170843 KEGG:rno:170843 UCSC:RGD:621738 InParanoid:Q920F3
NextBio:621265 ArrayExpress:Q920F3 Genevestigator:Q920F3
Uniprot:Q920F3
Length = 349
Score = 268 (99.4 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 58/127 (45%), Positives = 86/127 (67%)
Query: 139 VKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK 198
+K R+ +PV +YP FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+
Sbjct: 58 IKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELR 117
Query: 199 DKPG---YEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 255
K G Y HL++ LHVL+E P SR+ HA+ ++ L P D + D +++QLRE
Sbjct: 118 -KSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP-DYN-DEIRQEQLRE 174
Query: 256 LAMLNGT 262
L+ LNG+
Sbjct: 175 LSYLNGS 181
Score = 76 (31.8 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 30 LDRERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHER 79
+ E+YL EL+AE+ L P FV SRLL++EI + G + D E+
Sbjct: 1 MGEEKYLPELMAEKDSLDPSFVHA----SRLLAEEIEKFQGSDGRKEDEEK 47
>UNIPROTKB|F1N7N1 [details] [associations]
symbol:QKI "Protein quaking" species:9913 "Bos taurus"
[GO:0042759 "long-chain fatty acid biosynthetic process"
evidence=IEA] [GO:0042692 "muscle cell differentiation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IEA] [GO:0007286
"spermatid development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0005886 GO:GO:0005634 GO:GO:0007286 GO:GO:0003723
GO:GO:0042692 GO:GO:0042759 GO:GO:0042552 GO:GO:0010628
GO:GO:0001570 GeneTree:ENSGT00550000074434 IPI:IPI00690241
EMBL:DAAA02027443 EMBL:DAAA02027444 EMBL:DAAA02027445
EMBL:DAAA02027446 EMBL:DAAA02027447 Ensembl:ENSBTAT00000054202
OMA:CLTHLKF Uniprot:F1N7N1
Length = 315
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 52 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 111
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 112 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 171
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 172 AILNGTYRD 180
>UNIPROTKB|Q5W9D7 [details] [associations]
symbol:QKI "Protein quaking" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0006417
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 GO:GO:0051028
eggNOG:COG5176 KO:K14945 HOGENOM:HOG000019831 HOVERGEN:HBG093883
EMBL:AB177986 IPI:IPI00690241 RefSeq:NP_001007818.1
UniGene:Bt.91293 ProteinModelPortal:Q5W9D7 SMR:Q5W9D7 STRING:Q5W9D7
PRIDE:Q5W9D7 GeneID:493722 KEGG:bta:493722 CTD:9444
NextBio:20865466 Uniprot:Q5W9D7
Length = 341
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 198 AILNGTYRD 206
>UNIPROTKB|F1PLY2 [details] [associations]
symbol:QKI "Protein quaking" species:9615 "Canis lupus
familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00550000074434 EMBL:AAEX03000337
EMBL:AAEX03000338 Ensembl:ENSCAFT00000001203 Uniprot:F1PLY2
Length = 310
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 52 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 111
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 112 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 171
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 172 AILNGTYRD 180
>UNIPROTKB|F1PX61 [details] [associations]
symbol:QKI "Protein quaking" species:9615 "Canis lupus
familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00550000074434 OMA:CLTHLKF
EMBL:AAEX03000337 EMBL:AAEX03000338 Ensembl:ENSCAFT00000035144
Uniprot:F1PX61
Length = 339
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 81 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 140
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 141 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 200
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 201 AILNGTYRD 209
>UNIPROTKB|J9NVZ6 [details] [associations]
symbol:QKI "Protein quaking" species:9615 "Canis lupus
familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00550000074434 EMBL:AAEX03000337
EMBL:AAEX03000338 Ensembl:ENSCAFT00000045317 Uniprot:J9NVZ6
Length = 286
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 23 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 82
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 83 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 142
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 143 AILNGTYRD 151
>UNIPROTKB|Q9GMY1 [details] [associations]
symbol:QKI "Protein quaking" species:9615 "Canis lupus
familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0006417
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 GO:GO:0051028
eggNOG:COG5176 KO:K14945 HOGENOM:HOG000019831 HOVERGEN:HBG093883
CTD:9444 EMBL:AB047312 RefSeq:NP_001003021.1 UniGene:Cfa.57
ProteinModelPortal:Q9GMY1 SMR:Q9GMY1 PRIDE:Q9GMY1 GeneID:606754
KEGG:cfa:606754 NextBio:20892526 Uniprot:Q9GMY1
Length = 341
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 198 AILNGTYRD 206
>UNIPROTKB|F5GXS8 [details] [associations]
symbol:QKI "Protein quaking" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 GO:GO:0003723
EMBL:AL356119 EMBL:AL031781 HGNC:HGNC:21100 ChiTaRS:QKI
IPI:IPI01009757 ProteinModelPortal:F5GXS8 SMR:F5GXS8
Ensembl:ENST00000537041 ArrayExpress:F5GXS8 Bgee:F5GXS8
Uniprot:F5GXS8
Length = 160
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 23 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 82
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 83 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 142
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 143 AILNGTYRD 151
>UNIPROTKB|F5GYM3 [details] [associations]
symbol:QKI "Protein quaking" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0042692
"muscle cell differentiation" evidence=IEA] [GO:0042759 "long-chain
fatty acid biosynthetic process" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 GO:GO:0007286
GO:GO:0003723 GO:GO:0042692 GO:GO:0042759 GO:GO:0042552
GO:GO:0010628 GO:GO:0001570 EMBL:AL356119 EMBL:AL031781
HGNC:HGNC:21100 ChiTaRS:QKI IPI:IPI01009310
ProteinModelPortal:F5GYM3 SMR:F5GYM3 Ensembl:ENST00000544823
ArrayExpress:F5GYM3 Bgee:F5GYM3 Uniprot:F5GYM3
Length = 170
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 23 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 82
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 83 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 142
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 143 AILNGTYRD 151
>UNIPROTKB|Q96PU8 [details] [associations]
symbol:QKI "Protein quaking" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0017124
"SH3 domain binding" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042692 "muscle cell
differentiation" evidence=IEA] [GO:0042759 "long-chain fatty acid
biosynthetic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0008380
GO:GO:0007286 GO:GO:0006397 GO:GO:0003723 GO:GO:0042692
GO:GO:0042759 GO:GO:0042552 GO:GO:0010628 GO:GO:0001570
GO:GO:0051028 eggNOG:COG5176 KO:K14945 HOVERGEN:HBG093883
OMA:GMAFPTK OrthoDB:EOG4RFKSZ CTD:9444 EMBL:AB067798 EMBL:AB067799
EMBL:AB067800 EMBL:AB067801 EMBL:AB067808 EMBL:AF142417
EMBL:AF142418 EMBL:AF142419 EMBL:AF142420 EMBL:AF142421
EMBL:AF142422 EMBL:AY780788 EMBL:DQ323998 EMBL:AL356119
EMBL:AL031781 EMBL:BC012222 EMBL:BC019917 EMBL:AK027309
IPI:IPI00385562 IPI:IPI00514277 IPI:IPI00736672 IPI:IPI00749287
IPI:IPI00759828 IPI:IPI00942653 RefSeq:NP_006766.1
RefSeq:NP_996735.1 RefSeq:NP_996736.1 RefSeq:NP_996737.1
UniGene:Hs.510324 ProteinModelPortal:Q96PU8 SMR:Q96PU8
IntAct:Q96PU8 MINT:MINT-1445480 STRING:Q96PU8 PhosphoSite:Q96PU8
DMDM:74761039 PaxDb:Q96PU8 PRIDE:Q96PU8 DNASU:9444
Ensembl:ENST00000275262 Ensembl:ENST00000361195
Ensembl:ENST00000361752 Ensembl:ENST00000361758
Ensembl:ENST00000392127 Ensembl:ENST00000424802
Ensembl:ENST00000453779 GeneID:9444 KEGG:hsa:9444 UCSC:uc003que.3
UCSC:uc003quf.3 UCSC:uc003qug.3 UCSC:uc003quh.3 UCSC:uc003qui.3
UCSC:uc003quj.3 GeneCards:GC06P163835 HGNC:HGNC:21100 HPA:CAB022602
HPA:HPA019123 MIM:609590 neXtProt:NX_Q96PU8 PharmGKB:PA134912180
InParanoid:Q96PU8 ChiTaRS:QKI GenomeRNAi:9444 NextBio:35368
ArrayExpress:Q96PU8 Bgee:Q96PU8 Genevestigator:Q96PU8
GermOnline:ENSG00000112531 Uniprot:Q96PU8
Length = 341
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 198 AILNGTYRD 206
>UNIPROTKB|F1SBW4 [details] [associations]
symbol:QKI "Protein quaking" species:9823 "Sus scrofa"
[GO:0042759 "long-chain fatty acid biosynthetic process"
evidence=IEA] [GO:0042692 "muscle cell differentiation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IEA] [GO:0007286
"spermatid development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0005886 GO:GO:0005634 GO:GO:0007286 GO:GO:0003723
GO:GO:0042692 GO:GO:0042759 GO:GO:0042552 GO:GO:0010628
GO:GO:0001570 GeneTree:ENSGT00550000074434 OMA:CLTHLKF
EMBL:AEMK01188940 EMBL:CU062434 EMBL:CU074317
Ensembl:ENSSSCT00000004455 Uniprot:F1SBW4
Length = 311
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 53 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 112
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 113 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 172
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 173 AILNGTYRD 181
>UNIPROTKB|Q5W9D5 [details] [associations]
symbol:QKI "Protein quaking" species:9823 "Sus scrofa"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0006417
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 GO:GO:0051028
eggNOG:COG5176 KO:K14945 HOGENOM:HOG000019831 HOVERGEN:HBG093883
OrthoDB:EOG4RFKSZ CTD:9444 EMBL:AB177988 RefSeq:NP_001007196.1
UniGene:Ssc.7659 ProteinModelPortal:Q5W9D5 SMR:Q5W9D5 PRIDE:Q5W9D5
GeneID:492277 KEGG:ssc:492277 Uniprot:Q5W9D5
Length = 341
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 198 AILNGTYRD 206
>MGI|MGI:97837 [details] [associations]
symbol:Qk "quaking" species:10090 "Mus musculus" [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IGI] [GO:0008366 "axon ensheathment"
evidence=IMP] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0017124
"SH3 domain binding" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0042552 "myelination"
evidence=IMP] [GO:0042692 "muscle cell differentiation"
evidence=IMP] [GO:0042759 "long-chain fatty acid biosynthetic
process" evidence=IMP] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 MGI:MGI:97837 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0008380 GO:GO:0007286
GO:GO:0006397 GO:GO:0003723 GO:GO:0042692 GO:GO:0042759
GO:GO:0042552 GO:GO:0010628 GO:GO:0001570 GO:GO:0051028
eggNOG:COG5176 GeneTree:ENSGT00550000074434 KO:K14945
HOVERGEN:HBG093883 OMA:GMAFPTK OrthoDB:EOG4RFKSZ EMBL:U44940
EMBL:AF090402 EMBL:AF090403 EMBL:AF090404 EMBL:AF091047
EMBL:AF090401 EMBL:AF090392 EMBL:AF090393 EMBL:AF090394
EMBL:AF090395 EMBL:AF090396 EMBL:AF090397 EMBL:AF090400
EMBL:AF467890 EMBL:AK005169 EMBL:AK132303 EMBL:BC053426
EMBL:BC056346 EMBL:AJ012812 EMBL:AJ012813 EMBL:AJ012814
EMBL:AJ012816 EMBL:AJ012817 EMBL:AJ012815 EMBL:AJ012818
EMBL:AJ012820 EMBL:AJ012819 IPI:IPI00130483 IPI:IPI00136596
IPI:IPI00759871 IPI:IPI00759885 IPI:IPI00759892 IPI:IPI00759906
IPI:IPI00759949 IPI:IPI00760097 RefSeq:NP_001152988.1
RefSeq:NP_001152989.1 RefSeq:NP_068681.1 UniGene:Mm.130694
UniGene:Mm.384135 UniGene:Mm.393248 PDB:4DNN PDBsum:4DNN
ProteinModelPortal:Q9QYS9 SMR:Q9QYS9 STRING:Q9QYS9
PhosphoSite:Q9QYS9 PaxDb:Q9QYS9 PRIDE:Q9QYS9
Ensembl:ENSMUST00000042296 Ensembl:ENSMUST00000097414 GeneID:19317
KEGG:mmu:19317 UCSC:uc008akb.2 UCSC:uc008ake.2 UCSC:uc012ajv.1
CTD:19317 InParanoid:Q9QYS9 NextBio:296279 Bgee:Q9QYS9
CleanEx:MM_QK Genevestigator:Q9QYS9 GermOnline:ENSMUSG00000062078
Uniprot:Q9QYS9
Length = 341
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 198 AILNGTYRD 206
>RGD|1584886 [details] [associations]
symbol:Qk "quaking" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007286 "spermatid development" evidence=ISO] [GO:0008366 "axon
ensheathment" evidence=ISO] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=ISO] [GO:0017124 "SH3 domain binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042552
"myelination" evidence=ISO] [GO:0042692 "muscle cell
differentiation" evidence=ISO] [GO:0042759 "long-chain fatty acid
biosynthetic process" evidence=ISO] [GO:0051028 "mRNA transport"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0008380 GO:GO:0007286
GO:GO:0006397 GO:GO:0003723 GO:GO:0042692 GO:GO:0042759
GO:GO:0042552 GO:GO:0010628 GO:GO:0001570 GO:GO:0051028
eggNOG:COG5176 HOGENOM:HOG000019831 HOVERGEN:HBG093883 OMA:GMAFPTK
OrthoDB:EOG4RFKSZ EMBL:AABR03000138 EMBL:AB054997 IPI:IPI00394474
UniGene:Rn.228876 ProteinModelPortal:Q91XU1 SMR:Q91XU1
STRING:Q91XU1 PhosphoSite:Q91XU1 RGD:628653 InParanoid:Q91XU1
ArrayExpress:Q91XU1 Genevestigator:Q91XU1
GermOnline:ENSRNOG00000017174 Uniprot:Q91XU1
Length = 341
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 198 AILNGTYRD 206
>UNIPROTKB|D4A2X0 [details] [associations]
symbol:Qk "Protein Qk" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 RGD:1584886
GO:GO:0003723 IPI:IPI00213936 PRIDE:D4A2X0
Ensembl:ENSRNOT00000023290 ArrayExpress:D4A2X0 Uniprot:D4A2X0
Length = 338
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 198 AILNGTYRD 206
>UNIPROTKB|F1LMH5 [details] [associations]
symbol:Qk "Protein Qk" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0042692
"muscle cell differentiation" evidence=IEA] [GO:0042759 "long-chain
fatty acid biosynthetic process" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 RGD:1584886
GO:GO:0005886 GO:GO:0005634 GO:GO:0007286 GO:GO:0003723
GO:GO:0042692 GO:GO:0042759 GO:GO:0042552 GO:GO:0010628
GO:GO:0001570 IPI:IPI01016326 Ensembl:ENSRNOT00000035402
ArrayExpress:F1LMH5 Uniprot:F1LMH5
Length = 341
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 198 AILNGTYRD 206
>UNIPROTKB|F1NWU9 [details] [associations]
symbol:QKI "Protein quaking" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 GO:GO:0003723
GeneTree:ENSGT00550000074434 IPI:IPI00682938 EMBL:AADN02035543
EMBL:AADN02035544 Ensembl:ENSGALT00000018845 ArrayExpress:F1NWU9
Uniprot:F1NWU9
Length = 334
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 198 AILNGTYRD 206
>UNIPROTKB|F1NWV0 [details] [associations]
symbol:QKI "Protein quaking" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0042692
"muscle cell differentiation" evidence=IEA] [GO:0042759 "long-chain
fatty acid biosynthetic process" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 GO:GO:0005886
GO:GO:0005634 GO:GO:0003723 GO:GO:0042759 GO:GO:0010628
GeneTree:ENSGT00550000074434 OMA:GMAFPTK IPI:IPI00760364
EMBL:AADN02035543 EMBL:AADN02035544 Ensembl:ENSGALT00000018844
ArrayExpress:F1NWV0 Uniprot:F1NWV0
Length = 340
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 198 AILNGTYRD 206
>UNIPROTKB|Q9YH18 [details] [associations]
symbol:QKI "Protein quaking" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0017124
"SH3 domain binding" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0006417
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 GO:GO:0051028
eggNOG:COG5176 KO:K14945 HOGENOM:HOG000019831 HOVERGEN:HBG093883
CTD:9444 EMBL:U86764 EMBL:U86765 EMBL:U86766 EMBL:U86767
IPI:IPI00582039 IPI:IPI00595503 IPI:IPI00682938 IPI:IPI00760364
RefSeq:NP_989641.2 UniGene:Gga.3168 ProteinModelPortal:Q9YH18
SMR:Q9YH18 STRING:Q9YH18 GeneID:374204 KEGG:gga:374204
InParanoid:Q9YH18 NextBio:20813708 Uniprot:Q9YH18
Length = 340
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 198 AILNGTYRD 206
>ZFIN|ZDB-GENE-081028-54 [details] [associations]
symbol:qkib "QKI, KH domain containing, RNA binding
b" species:7955 "Danio rerio" [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
SMART:SM00322 ZFIN:ZDB-GENE-081028-54 GO:GO:0003723
GeneTree:ENSGT00550000074434 EMBL:CABZ01010714 EMBL:CABZ01010715
EMBL:CU019624 EMBL:CU467873 EMBL:CU915796 EMBL:FP325125
IPI:IPI00898626 Ensembl:ENSDART00000018737 Uniprot:F1QTT6
Length = 345
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 65/129 (50%), Positives = 89/129 (68%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV + LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVNKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 198 AILNGTYRD 206
>WB|WBGene00006423 [details] [associations]
symbol:asd-2 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0007411
"axon guidance" evidence=IMP] [GO:0007413 "axonal fasciculation"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0043186 "P granule" evidence=IDA]
[GO:0003727 "single-stranded RNA binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0097157 "pre-mRNA intronic binding"
evidence=IPI] [GO:0030529 "ribonucleoprotein complex" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0007411
GO:GO:0002119 GO:GO:0003727 GO:GO:0040017 GO:GO:0007413
GO:GO:0097157 GeneTree:ENSGT00550000074434 GO:GO:0000381
GO:GO:0043186 EMBL:FO080897 EMBL:FO080896 RefSeq:NP_001250340.1
UniGene:Cel.16725 ProteinModelPortal:D4YW53 SMR:D4YW53
EnsemblMetazoa:T21G5.5d GeneID:188703 KEGG:cel:CELE_T21G5.5
CTD:188703 WormBase:T21G5.5d OMA:IQQYAAG ArrayExpress:D4YW53
Uniprot:D4YW53
Length = 486
Score = 294 (108.6 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 57/118 (48%), Positives = 81/118 (68%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHL 206
VP ++P++NFVGRILGPRG + K++E T C++ +RGRGS++D KEE + KP +EHL
Sbjct: 166 VPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEELNRGKPNWEHL 225
Query: 207 NEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLR 264
+E LHVL++ E E+ +L AV + LL P E D K++QL ELA++NGT R
Sbjct: 226 SEELHVLIQCEDTENRAKVKLMRAVEEVRKLLVPAPEGEDDLKRKQLMELAIINGTYR 283
Score = 56 (24.8 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 35 YLAELLAERQKLGPFVQVLPLCSRLLSQEIRRI 67
YL++LL ++++L F V RL +EI ++
Sbjct: 102 YLSQLLKDKKQLAAFPNVFHHLERLADEEINKV 134
>ZFIN|ZDB-GENE-040426-1462 [details] [associations]
symbol:qki2 "QKI, KH domain containing, RNA
binding 2" species:7955 "Danio rerio" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0017124 "SH3 domain binding"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
ZFIN:ZDB-GENE-040426-1462 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0030154 GO:GO:0006417 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 GO:GO:0051028 eggNOG:COG5176
GeneTree:ENSGT00550000074434 KO:K14945 EMBL:AB086654 EMBL:BC061709
EMBL:BC065344 IPI:IPI00501345 IPI:IPI00760231 RefSeq:NP_957136.2
UniGene:Dr.133657 ProteinModelPortal:Q6P104 SMR:Q6P104
Ensembl:ENSDART00000027034 GeneID:393815 KEGG:dre:393815 CTD:393815
HOGENOM:HOG000019831 HOVERGEN:HBG093883 OMA:GMAFPTK
OrthoDB:EOG4RFKSZ NextBio:20814805 Bgee:Q6P104 Uniprot:Q6P104
Length = 319
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 64/129 (49%), Positives = 89/129 (68%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+ + +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE 265
A+LNGT R+
Sbjct: 198 AILNGTYRD 206
>ZFIN|ZDB-GENE-990415-230 [details] [associations]
symbol:qkia "QKI, KH domain containing, RNA binding
a" species:7955 "Danio rerio" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=IMP] [GO:0007519 "skeletal muscle tissue
development" evidence=IMP] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IGI] [GO:0017124 "SH3 domain binding"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
ZFIN:ZDB-GENE-990415-230 GO:GO:0003723 GeneTree:ENSGT00550000074434
GO:GO:0008589 GO:GO:0007519 GO:GO:0070935 EMBL:BX936408
EMBL:BX936463 IPI:IPI00993157 Ensembl:ENSDART00000125640
ArrayExpress:F1R190 Bgee:F1R190 Uniprot:F1R190
Length = 486
Score = 322 (118.4 bits), Expect = 8.2e-29, P = 8.2e-29
Identities = 64/132 (48%), Positives = 89/132 (67%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIK 193
P P+V +L VPV +YP++NFVGRILGPRG + K++EA T C++ +RGR S++D K
Sbjct: 179 PVGPIVHLQEKLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGCKIMVRGRSSMRDKKK 238
Query: 194 EEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQL 253
EE+ + KP +EHLNE LHVL+ E + ++ AV ++ LL P E D+ KK QL
Sbjct: 239 EEQNRGKPNWEHLNEDLHVLITVEDTQTRAEIKMRRAVEEVKKLLVPAAEGEDNLKKMQL 298
Query: 254 RELAMLNGTLRE 265
ELA+LNGT R+
Sbjct: 299 MELAILNGTYRD 310
>ZFIN|ZDB-GENE-061013-497 [details] [associations]
symbol:khdrbs2 "KH domain containing, RNA binding,
signal transduction associated 2" species:7955 "Danio rerio"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 ZFIN:ZDB-GENE-061013-497
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0003723
eggNOG:COG5176 GeneTree:ENSGT00550000074434 HOGENOM:HOG000230771
HOVERGEN:HBG079164 EMBL:BC124701 IPI:IPI00802483
RefSeq:NP_001070758.1 UniGene:Dr.92774 ProteinModelPortal:Q08BJ2
PRIDE:Q08BJ2 Ensembl:ENSDART00000101134 GeneID:768147
KEGG:dre:768147 CTD:202559 InParanoid:Q08BJ2 OMA:PPIARGV
OrthoDB:EOG418BP2 NextBio:20918466 Bgee:Q08BJ2 Uniprot:Q08BJ2
Length = 346
Score = 262 (97.3 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 57/127 (44%), Positives = 85/127 (66%)
Query: 139 VKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK 198
+K R+ +PV +YP FNFVG++LGPRGNS+KR++ T ++ I G+GS++D KEE+L+
Sbjct: 58 IKLSERVLIPVQQYPKFNFVGKLLGPRGNSMKRLQEETGAKMSILGKGSMRDKGKEEELR 117
Query: 199 DKPG---YEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 255
K G Y HL+ LHVL+E P SR+ HA+ ++ L P D + D +++QLRE
Sbjct: 118 -KSGEAKYAHLSNDLHVLIEVFAPPGEAYSRMSHALEEIKKFLVP-DYN-DEIRQEQLRE 174
Query: 256 LAMLNGT 262
L+ LNG+
Sbjct: 175 LSYLNGS 181
Score = 69 (29.3 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 30 LDRERYLAELLAERQKL-GPFVQVLPLCSRLLSQEIRRITG 69
+D+++YL EL+AE++ L FV + RLL++EI + G
Sbjct: 1 MDQDKYLPELVAEKESLDASFVHAM----RLLAEEIEKFEG 37
>UNIPROTKB|A4FV24 [details] [associations]
symbol:KHDRBS3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 SMART:SM00322
GO:GO:0005634 GO:GO:0003723 eggNOG:COG5176
GeneTree:ENSGT00550000074434 HOGENOM:HOG000230771
HOVERGEN:HBG079164 CTD:10656 KO:K14942 OMA:ETYGEYE
OrthoDB:EOG4DBTFN EMBL:DAAA02037568 EMBL:DAAA02037569 EMBL:BC123651
IPI:IPI00717873 RefSeq:NP_001076981.1 UniGene:Bt.50935
STRING:A4FV24 Ensembl:ENSBTAT00000002827 GeneID:615095
KEGG:bta:615095 InParanoid:A4FV24 NextBio:20899441 Uniprot:A4FV24
Length = 346
Score = 247 (92.0 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 54/118 (45%), Positives = 79/118 (66%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG---Y 203
+PV ++P FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ K G Y
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELR-KSGEAKY 120
Query: 204 EHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
HLN+ LHVL+E P +R+ HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 121 FHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP-DYN-DEIRQAQLQELTYLNG 176
Score = 62 (26.9 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 33 ERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRR 66
E+YL EL+AE+ L P F L RL++QEI +
Sbjct: 3 EKYLPELMAEKDSLDPSFTHAL----RLVNQEIEK 33
Score = 37 (18.1 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 31 DRERYLAELLAERQKLGPFVQVLPL 55
D E+Y+ ++ + KLG V ++P+
Sbjct: 41 DEEKYIDVVINKNMKLGQKV-LIPV 64
>UNIPROTKB|E2RLG8 [details] [associations]
symbol:KHDRBS3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
SMART:SM00322 GO:GO:0005634 GO:GO:0003723
GeneTree:ENSGT00550000074434 CTD:10656 KO:K14942 OMA:ETYGEYE
EMBL:AAEX03008846 RefSeq:XP_848348.1 Ensembl:ENSCAFT00000001808
GeneID:475106 KEGG:cfa:475106 Uniprot:E2RLG8
Length = 346
Score = 247 (92.0 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 54/118 (45%), Positives = 79/118 (66%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG---Y 203
+PV ++P FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ K G Y
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELR-KSGEAKY 120
Query: 204 EHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
HLN+ LHVL+E P +R+ HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 121 FHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP-DYN-DEIRQAQLQELTYLNG 176
Score = 62 (26.9 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 33 ERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRR 66
E+YL EL+AE+ L P F L RL++QEI +
Sbjct: 3 EKYLPELMAEKDSLDPSFTHAL----RLVNQEIEK 33
Score = 37 (18.1 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 31 DRERYLAELLAERQKLGPFVQVLPL 55
D E+Y+ ++ + KLG V ++P+
Sbjct: 41 DEEKYIDVVINKNMKLGQKV-LIPV 64
>UNIPROTKB|O75525 [details] [associations]
symbol:KHDRBS3 "KH domain-containing, RNA-binding, signal
transduction-associated protein 3" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0017124 "SH3 domain binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR004087 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0006355 GO:GO:0003727
GO:GO:0006397 GO:GO:0007283 GO:GO:0006351 GO:GO:0003723
eggNOG:COG5176 GO:GO:0033120 HOGENOM:HOG000230771
HOVERGEN:HBG079164 HPA:HPA029392 EMBL:AF051321 EMBL:AF051322
EMBL:AF069681 EMBL:BC032606 EMBL:BC068536 IPI:IPI00008570
IPI:IPI00744983 RefSeq:NP_006549.1 UniGene:Hs.444558
ProteinModelPortal:O75525 SMR:O75525 IntAct:O75525
MINT:MINT-1411200 STRING:O75525 PhosphoSite:O75525 PaxDb:O75525
PRIDE:O75525 DNASU:10656 Ensembl:ENST00000355849 GeneID:10656
KEGG:hsa:10656 UCSC:uc003yuv.3 UCSC:uc003yuw.3 CTD:10656
GeneCards:GC08P136538 HGNC:HGNC:18117 HPA:HPA000275 HPA:HPA000500
MIM:610421 neXtProt:NX_O75525 PharmGKB:PA30094 InParanoid:O75525
KO:K14942 OMA:ETYGEYE OrthoDB:EOG4DBTFN PhylomeDB:O75525
GenomeRNAi:10656 NextBio:40513 ArrayExpress:O75525 Bgee:O75525
CleanEx:HS_KHDRBS3 Genevestigator:O75525 GermOnline:ENSG00000131773
Uniprot:O75525
Length = 346
Score = 247 (92.0 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 54/118 (45%), Positives = 79/118 (66%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG---Y 203
+PV ++P FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ K G Y
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELR-KSGEAKY 120
Query: 204 EHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
HLN+ LHVL+E P +R+ HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 121 FHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP-DYN-DEIRQAQLQELTYLNG 176
Score = 62 (26.9 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 33 ERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRR 66
E+YL EL+AE+ L P F L RL++QEI +
Sbjct: 3 EKYLPELMAEKDSLDPSFTHAL----RLVNQEIEK 33
Score = 37 (18.1 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 31 DRERYLAELLAERQKLGPFVQVLPL 55
D E+Y+ ++ + KLG V ++P+
Sbjct: 41 DEEKYIDVVINKNMKLGQKV-LIPV 64
>RGD|620921 [details] [associations]
symbol:Khdrbs3 "KH domain containing, RNA binding, signal
transduction associated 3" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA;ISO;ISS] [GO:0003727
"single-stranded RNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IDA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0033120
"positive regulation of RNA splicing" evidence=IMP] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR004087 PROSITE:PS50084
SMART:SM00322 RGD:620921 GO:GO:0005634 GO:GO:0006355 GO:GO:0003727
GO:GO:0006397 GO:GO:0006351 GO:GO:0033120 HOGENOM:HOG000230771
HOVERGEN:HBG079164 CTD:10656 KO:K14942 OrthoDB:EOG4DBTFN
EMBL:AF152547 IPI:IPI00203901 RefSeq:NP_071585.1 UniGene:Rn.229046
ProteinModelPortal:Q9JLP1 STRING:Q9JLP1 PhosphoSite:Q9JLP1
PRIDE:Q9JLP1 GeneID:64015 KEGG:rno:64015 UCSC:RGD:620921
eggNOG:NOG249423 InParanoid:Q9JLP1 NextBio:612594
ArrayExpress:Q9JLP1 Genevestigator:Q9JLP1
GermOnline:ENSRNOG00000009539 Uniprot:Q9JLP1
Length = 346
Score = 247 (92.0 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 54/118 (45%), Positives = 79/118 (66%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG---Y 203
+PV ++P FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ K G Y
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELR-KSGEAKY 120
Query: 204 EHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
HLN+ LHVL+E P +R+ HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 121 FHLNDDLHVLIEVFAPPAEAYARMGHALEDIKKFLIP-DYN-DEIRQAQLQELTYLNG 176
Score = 58 (25.5 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 33 ERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRR 66
E+YL EL+AE+ L P F L RL+++EI +
Sbjct: 3 EKYLPELMAEKDSLDPSFTHAL----RLVNREIEK 33
Score = 37 (18.1 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 31 DRERYLAELLAERQKLGPFVQVLPL 55
D E+Y+ ++ + KLG V ++P+
Sbjct: 41 DEEKYIDVVINKNMKLGQKV-LIPV 64
>MGI|MGI:1313312 [details] [associations]
symbol:Khdrbs3 "KH domain containing, RNA binding, signal
transduction associated 3" species:10090 "Mus musculus" [GO:0003723
"RNA binding" evidence=ISO] [GO:0003727 "single-stranded RNA
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=ISO]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0033120
"positive regulation of RNA splicing" evidence=ISO]
InterPro:IPR004087 PROSITE:PS50084 SMART:SM00322 MGI:MGI:1313312
GO:GO:0005634 GO:GO:0006355 GO:GO:0003727 GO:GO:0006397
GO:GO:0006351 GO:GO:0003723 eggNOG:COG5176
GeneTree:ENSGT00550000074434 GO:GO:0033120 HOGENOM:HOG000230771
HOVERGEN:HBG079164 CTD:10656 KO:K14942 OMA:ETYGEYE
OrthoDB:EOG4DBTFN EMBL:AF079763 EMBL:AF099092 EMBL:BC031507
EMBL:BC057577 IPI:IPI00314520 RefSeq:NP_034288.2 UniGene:Mm.17964
ProteinModelPortal:Q9R226 SMR:Q9R226 IntAct:Q9R226 STRING:Q9R226
PhosphoSite:Q9R226 PaxDb:Q9R226 PRIDE:Q9R226
Ensembl:ENSMUST00000022954 GeneID:13992 KEGG:mmu:13992
UCSC:uc007wbf.1 InParanoid:Q9R226 NextBio:284872 Bgee:Q9R226
Genevestigator:Q9R226 GermOnline:ENSMUSG00000022332 Uniprot:Q9R226
Length = 346
Score = 247 (92.0 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 54/118 (45%), Positives = 79/118 (66%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG---Y 203
+PV ++P FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ K G Y
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELR-KSGEAKY 120
Query: 204 EHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
HLN+ LHVL+E P +R+ HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 121 FHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP-DYN-DEIRQAQLQELTYLNG 176
Score = 58 (25.5 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 33 ERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRR 66
E+YL EL+AE+ L P F L RL+++EI +
Sbjct: 3 EKYLPELMAEKDSLDPSFTHAL----RLVNREIEK 33
>FB|FBgn0034739 [details] [associations]
symbol:CG3927 species:7227 "Drosophila melanogaster"
[GO:0003723 "RNA binding" evidence=ISM;IEA] [GO:0016607 "nuclear
speck" evidence=IDA] [GO:0046331 "lateral inhibition" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF13014 PROSITE:PS50084
SMART:SM00322 GO:GO:0016607 GO:GO:0003723 GO:GO:0046331 HSSP:Q9BW01
eggNOG:COG5176 EMBL:AY075269 ProteinModelPortal:Q8T8U7 SMR:Q8T8U7
STRING:Q8T8U7 PaxDb:Q8T8U7 PRIDE:Q8T8U7 FlyBase:FBgn0034739
InParanoid:Q8T8U7 ArrayExpress:Q8T8U7 Bgee:Q8T8U7 Uniprot:Q8T8U7
Length = 275
Score = 236 (88.1 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 51/124 (41%), Positives = 82/124 (66%)
Query: 139 VKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK 198
+K + ++ VPV+K+P FNF G+ILGP+GNSL+R++ T C++ I+GR S++D KEE+L+
Sbjct: 84 MKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEEELR 143
Query: 199 DK--PGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
P Y HL++ L + V A P +R+ +A+A + L P D++ D + +QQ REL
Sbjct: 144 SSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIP-DDNDDVWHEQQ-REL 201
Query: 257 AMLN 260
+N
Sbjct: 202 MEMN 205
Score = 60 (26.2 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 33 ERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRI--TGYNP 72
+++LA+L AER++L PLC+ L+ + + R+ TG P
Sbjct: 32 QKFLADLDAERKRLSA---EFPLCALLIDESVDRVYSTGRIP 70
>TAIR|locus:2176222 [details] [associations]
symbol:AT5G51300 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=NAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=RCA] InterPro:IPR000504
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
PROSITE:PS50102 PROSITE:PS50158 SMART:SM00322 SMART:SM00343
SMART:SM00360 EMBL:CP002688 GO:GO:0008380 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723 Gene3D:4.10.60.10
SUPFAM:SSF57756 HSSP:Q9BW01 KO:K13095 EMBL:AB023044 OMA:GDGPSHE
EMBL:AY142629 EMBL:AK316802 EMBL:AK317057 IPI:IPI00537668
RefSeq:NP_001032055.1 RefSeq:NP_199943.1 RefSeq:NP_851169.1
UniGene:At.22924 ProteinModelPortal:Q9LU44 SMR:Q9LU44 IntAct:Q9LU44
STRING:Q9LU44 PRIDE:Q9LU44 EnsemblPlants:AT5G51300.1
EnsemblPlants:AT5G51300.2 EnsemblPlants:AT5G51300.3 GeneID:835204
KEGG:ath:AT5G51300 TAIR:At5g51300 InParanoid:Q9LU44
PhylomeDB:Q9LU44 ProtClustDB:CLSN2687224 Genevestigator:Q9LU44
Uniprot:Q9LU44
Length = 804
Score = 288 (106.4 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 61/123 (49%), Positives = 86/123 (69%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGY 203
+L +P+ ++P +NF+G I+GPRGN+ KR+E T ++ IRG+GSVK+ ++K KD
Sbjct: 244 KLFIPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEGRHQQK-KDLKYD 302
Query: 204 EHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTL 263
NE LHVLVEAE E L+ A ++E LL+PVDE L+ +K+QQLRELA LNGT+
Sbjct: 303 PSENEDLHVLVEAETQE-----ALEAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTI 357
Query: 264 REE 266
R+E
Sbjct: 358 RDE 360
>ZFIN|ZDB-GENE-040426-2344 [details] [associations]
symbol:khdrbs1b "KH domain containing, RNA
binding, signal transduction associated 1b" species:7955 "Danio
rerio" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
ZFIN:ZDB-GENE-040426-2344 GO:GO:0003723 EMBL:BX547939 HSSP:Q9BW01
eggNOG:COG5176 GeneTree:ENSGT00550000074434 InterPro:IPR012956
Pfam:PF08143 HOGENOM:HOG000230771 HOVERGEN:HBG079164 KO:K13198
OMA:FMELSYL OrthoDB:EOG4JHCGB EMBL:BC067711 EMBL:BC155179
IPI:IPI00494960 RefSeq:NP_998400.1 UniGene:Dr.162044
Ensembl:ENSDART00000103471 GeneID:406516 KEGG:dre:406516 CTD:406516
InParanoid:Q6NW62 NextBio:20818091 Uniprot:Q6NW62
Length = 352
Score = 235 (87.8 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 48/125 (38%), Positives = 78/125 (62%)
Query: 139 VKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK 198
+K R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+
Sbjct: 57 IKLKERILIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKNKEEELR 116
Query: 199 D--KPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+P Y HL+ LHV +E P R+ HA+ ++ L P + +D ++Q E+
Sbjct: 117 KNGEPKYAHLSMELHVFIEVFAPVPDAYMRMAHAMEEIKKFLFP--DMMDDICQEQFMEM 174
Query: 257 AMLNG 261
LNG
Sbjct: 175 KFLNG 179
Score = 56 (24.8 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 34 RYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRI 67
+YL +LLAER L P F + +L+S EI +I
Sbjct: 6 KYLPQLLAERDSLDPSFTHAM----KLISAEIEKI 36
>FB|FBgn0034659 [details] [associations]
symbol:CG4021 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0003723 "RNA
binding" evidence=ISM;IEA] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF13014
SMART:SM00322 EMBL:AE013599 GO:GO:0016607 GO:GO:0003723
GeneTree:ENSGT00550000074434 RefSeq:NP_611610.2 UniGene:Dm.15712
ProteinModelPortal:Q9W2D0 SMR:Q9W2D0 STRING:Q9W2D0
EnsemblMetazoa:FBtr0071716 GeneID:37484 KEGG:dme:Dmel_CG4021
UCSC:CG4021-RA FlyBase:FBgn0034659 InParanoid:Q9W2D0
OrthoDB:EOG4SQVCF PhylomeDB:Q9W2D0 GenomeRNAi:37484 NextBio:803886
ArrayExpress:Q9W2D0 Bgee:Q9W2D0 Uniprot:Q9W2D0
Length = 319
Score = 234 (87.4 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
Identities = 49/119 (41%), Positives = 79/119 (66%)
Query: 139 VKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK 198
+K + ++ VPV++YP FNF G+ILGP+GNSL+R++ T+C++ ++GR S++D KEE+L+
Sbjct: 82 MKIIQKVFVPVNQYPKFNFAGKILGPKGNSLRRLQEETQCKIALKGRSSMRDRNKEEELR 141
Query: 199 DKPGYEHLNEPLHVLVEA-EFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
P Y HL + L + V P + +SR+ +A+A + L P D + D +QLREL
Sbjct: 142 SDPRYAHLQKNLFLEVSTVAIPAEC-HSRIAYALAEIRKYLIP-DNN-DEVSHEQLREL 197
Score = 55 (24.4 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 7 PGSYFQYPPSGVHASPHRSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRR 66
P + P+ H R + + +++LA+L ERQ+L PLC+ L+ + R
Sbjct: 7 PSEITEEQPTTTHEYQPRLNEIA---QKFLADLDEERQRLSA---EFPLCALLIDEARDR 60
Query: 67 I--TGYNP 72
+ TG P
Sbjct: 61 VYATGRIP 68
>UNIPROTKB|E1C4N4 [details] [associations]
symbol:KHDRBS1 "KH domain-containing, RNA-binding, signal
transduction-associated protein 1" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005070 "SH3/SH2
adaptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046831 "regulation of RNA export from nucleus" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0045892 GO:GO:0016020
GO:GO:0003723 GO:GO:0007166 GeneTree:ENSGT00550000074434
GO:GO:0046831 EMBL:AADN02043780 EMBL:AADN02043781 EMBL:AADN02043782
IPI:IPI00822118 Ensembl:ENSGALT00000040759 Uniprot:E1C4N4
Length = 355
Score = 233 (87.1 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 48/120 (40%), Positives = 76/120 (63%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KP 201
R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P
Sbjct: 64 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 123
Query: 202 GYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL+ LNG
Sbjct: 124 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLNG 181
Score = 55 (24.4 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 34 RYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRI 67
+YL EL+AE+ L P F + +LLS EI +I
Sbjct: 6 KYLPELMAEKDSLDPSFTHAM----QLLSAEIEKI 36
>UNIPROTKB|J9NRH2 [details] [associations]
symbol:KHDRBS1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074434
EMBL:AAEX03001657 EMBL:AAEX03001658 Ensembl:ENSCAFT00000043112
Uniprot:J9NRH2
Length = 423
Score = 233 (87.1 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 48/120 (40%), Positives = 76/120 (63%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KP 201
R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P
Sbjct: 139 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 198
Query: 202 GYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL+ LNG
Sbjct: 199 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLNG 256
Score = 63 (27.2 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 22 PHRSSSLPLDRE-RYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHER 79
P ++S+ ++ E +YL EL+AE+ L P F + +LL+ EI +I + D E
Sbjct: 69 PSATASVKMEPENKYLPELMAEKDSLDPSFTHAM----QLLTAEIEKIQKGDSKKDDEEN 124
Query: 80 F 80
+
Sbjct: 125 Y 125
>UNIPROTKB|Q29RQ2 [details] [associations]
symbol:KHDRBS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046831 "regulation of RNA export from nucleus"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005070 "SH3/SH2 adaptor
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0045892 GO:GO:0016020
GO:GO:0003723 GO:GO:0007166 eggNOG:COG5176
GeneTree:ENSGT00550000074434 CTD:10657 HOGENOM:HOG000230771
HOVERGEN:HBG079164 KO:K13198 GO:GO:0046831 OMA:FMELSYL
OrthoDB:EOG4JHCGB EMBL:DAAA02006245 EMBL:BC114075 IPI:IPI00691512
RefSeq:NP_001039907.1 UniGene:Bt.23430 SMR:Q29RQ2 STRING:Q29RQ2
Ensembl:ENSBTAT00000016581 GeneID:538775 KEGG:bta:538775
InParanoid:Q29RQ2 NextBio:20877572 Uniprot:Q29RQ2
Length = 443
Score = 233 (87.1 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 48/120 (40%), Positives = 76/120 (63%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KP 201
R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P
Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
Query: 202 GYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL+ LNG
Sbjct: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLNG 276
Score = 63 (27.2 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 22 PHRSSSLPLDRE-RYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHER 79
P ++S+ ++ E +YL EL+AE+ L P F + +LL+ EI +I + D E
Sbjct: 89 PSATASVKMEPENKYLPELMAEKDSLDPSFTHAM----QLLTAEIEKIQKGDSKKDDEEN 144
Query: 80 F 80
+
Sbjct: 145 Y 145
>UNIPROTKB|Q07666 [details] [associations]
symbol:KHDRBS1 "KH domain-containing, RNA-binding, signal
transduction-associated protein 1" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017124 "SH3 domain
binding" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0070618 "Grb2-Sos complex" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=ISS]
[GO:0046831 "regulation of RNA export from nucleus" evidence=ISS]
[GO:0016020 "membrane" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IDA] [GO:0005070 "SH3/SH2 adaptor activity" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0046833 "positive regulation of
RNA export from nucleus" evidence=IDA] [GO:0045948 "positive
regulation of translational initiation" evidence=IDA] [GO:0031647
"regulation of protein stability" evidence=IDA] [GO:0007050 "cell
cycle arrest" evidence=TAS] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0006397 "mRNA processing" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0008283 "cell proliferation"
evidence=TAS] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0045892
GO:GO:0000086 GO:GO:0016020 GO:GO:0003677 EMBL:CH471059
GO:GO:0008283 GO:GO:0006397 GO:GO:0007050 GO:GO:0006351
GO:GO:0003723 GO:GO:0007166 PDB:3QHE PDBsum:3QHE eggNOG:COG5176
EMBL:AL445248 CTD:10657 HOGENOM:HOG000230771 HOVERGEN:HBG079164
KO:K13198 GO:GO:0046831 EMBL:M88108 EMBL:U78971 EMBL:AK091346
EMBL:AL139249 EMBL:BC000717 EMBL:BC010132 EMBL:BC019109
IPI:IPI00008575 IPI:IPI00082310 IPI:IPI00385834 PIR:A38219
RefSeq:NP_001258807.1 RefSeq:NP_006550.1 UniGene:Hs.445893 PDB:2XA6
PDBsum:2XA6 ProteinModelPortal:Q07666 SMR:Q07666 DIP:DIP-29007N
IntAct:Q07666 MINT:MINT-102826 STRING:Q07666 PhosphoSite:Q07666
DMDM:62511098 PaxDb:Q07666 PRIDE:Q07666 DNASU:10657
Ensembl:ENST00000327300 Ensembl:ENST00000492989 GeneID:10657
KEGG:hsa:10657 UCSC:uc001bua.1 UCSC:uc001bub.3
GeneCards:GC01P032479 HGNC:HGNC:18116 HPA:CAB005355 MIM:602489
neXtProt:NX_Q07666 PharmGKB:PA30092 InParanoid:Q07666 OMA:FMELSYL
OrthoDB:EOG4JHCGB PhylomeDB:Q07666 BindingDB:Q07666
ChEMBL:CHEMBL1795190 ChiTaRS:KHDRBS1 EvolutionaryTrace:Q07666
GenomeRNAi:10657 NextBio:40517 PMAP-CutDB:Q07666
ArrayExpress:Q07666 Bgee:Q07666 CleanEx:HS_KHDRBS1
Genevestigator:Q07666 GermOnline:ENSG00000121774 Uniprot:Q07666
Length = 443
Score = 233 (87.1 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 48/120 (40%), Positives = 76/120 (63%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KP 201
R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P
Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
Query: 202 GYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL+ LNG
Sbjct: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLNG 276
Score = 63 (27.2 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 22 PHRSSSLPLDRE-RYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHER 79
P ++S+ ++ E +YL EL+AE+ L P F + +LL+ EI +I + D E
Sbjct: 89 PSATASVKMEPENKYLPELMAEKDSLDPSFTHAM----QLLTAEIEKIQKGDSKKDDEEN 144
Query: 80 F 80
+
Sbjct: 145 Y 145
>UNIPROTKB|I3LP11 [details] [associations]
symbol:LOC100739434 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0046831 "regulation of RNA export from nucleus"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005070 "SH3/SH2 adaptor
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074434
EMBL:FP325355 EMBL:FP340586 Ensembl:ENSSSCT00000031351 OMA:REEPESY
Uniprot:I3LP11
Length = 443
Score = 233 (87.1 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 48/120 (40%), Positives = 76/120 (63%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KP 201
R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P
Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
Query: 202 GYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL+ LNG
Sbjct: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLNG 276
Score = 63 (27.2 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 22 PHRSSSLPLDRE-RYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHER 79
P ++S+ ++ E +YL EL+AE+ L P F + +LL+ EI +I + D E
Sbjct: 89 PSATASVKMEPENKYLPELMAEKDSLDPSFTHAM----QLLTAEIEKIQKGDSKKDDEEN 144
Query: 80 F 80
+
Sbjct: 145 Y 145
>UNIPROTKB|F1PLD5 [details] [associations]
symbol:KHDRBS1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0046831 "regulation of RNA export from
nucleus" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005070
"SH3/SH2 adaptor activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0045892
GO:GO:0016020 GO:GO:0003723 GO:GO:0007166
GeneTree:ENSGT00550000074434 GO:GO:0046831 OMA:FMELSYL
EMBL:AAEX03001657 EMBL:AAEX03001658 Ensembl:ENSCAFT00000017162
Uniprot:F1PLD5
Length = 444
Score = 233 (87.1 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 48/120 (40%), Positives = 76/120 (63%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KP 201
R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P
Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
Query: 202 GYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL+ LNG
Sbjct: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLNG 276
Score = 63 (27.2 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 22 PHRSSSLPLDRE-RYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHER 79
P ++S+ ++ E +YL EL+AE+ L P F + +LL+ EI +I + D E
Sbjct: 89 PSATASVKMEPENKYLPELMAEKDSLDPSFTHAM----QLLTAEIEKIQKGDSKKDDEEN 144
Query: 80 F 80
+
Sbjct: 145 Y 145
>UNIPROTKB|E5RG12 [details] [associations]
symbol:KHDRBS3 "KH domain-containing, RNA-binding, signal
transduction-associated protein 3" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
SMART:SM00322 GO:GO:0003723 HGNC:HGNC:18117 EMBL:AC040914
EMBL:AC104371 IPI:IPI00980277 ProteinModelPortal:E5RG12 SMR:E5RG12
Ensembl:ENST00000517394 ArrayExpress:E5RG12 Bgee:E5RG12
Uniprot:E5RG12
Length = 161
Score = 247 (92.0 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 54/118 (45%), Positives = 79/118 (66%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG---Y 203
+PV ++P FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ K G Y
Sbjct: 35 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELR-KSGEAKY 93
Query: 204 EHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
HLN+ LHVL+E P +R+ HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 94 FHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP-DYN-DEIRQAQLQELTYLNG 149
Score = 37 (18.1 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 31 DRERYLAELLAERQKLGPFVQVLPL 55
D E+Y+ ++ + KLG V ++P+
Sbjct: 14 DEEKYIDVVINKNMKLGQKV-LIPV 37
>UNIPROTKB|E5RJZ9 [details] [associations]
symbol:KHDRBS3 "KH domain-containing, RNA-binding, signal
transduction-associated protein 3" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR004087 SMART:SM00322 GO:GO:0005634 GO:GO:0003723
HGNC:HGNC:18117 EMBL:AC040914 EMBL:AC104371 IPI:IPI01010991
ProteinModelPortal:E5RJZ9 SMR:E5RJZ9 Ensembl:ENST00000524199
ArrayExpress:E5RJZ9 Bgee:E5RJZ9 Uniprot:E5RJZ9
Length = 265
Score = 247 (92.0 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 54/118 (45%), Positives = 79/118 (66%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG---Y 203
+PV ++P FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ K G Y
Sbjct: 34 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELR-KSGEAKY 92
Query: 204 EHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
HLN+ LHVL+E P +R+ HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 93 FHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP-DYN-DEIRQAQLQELTYLNG 148
Score = 37 (18.1 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 31 DRERYLAELLAERQKLGPFVQVLPL 55
D E+Y+ ++ + KLG V ++P+
Sbjct: 13 DEEKYIDVVINKNMKLGQKV-LIPV 36
>MGI|MGI:893579 [details] [associations]
symbol:Khdrbs1 "KH domain containing, RNA binding, signal
transduction associated 1" species:10090 "Mus musculus" [GO:0003723
"RNA binding" evidence=ISO;IDA] [GO:0005070 "SH3/SH2 adaptor
activity" evidence=ISO;IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007166 "cell surface receptor signaling
pathway" evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO]
[GO:0017124 "SH3 domain binding" evidence=ISO] [GO:0032403 "protein
complex binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045948 "positive
regulation of translational initiation" evidence=ISO] [GO:0046831
"regulation of RNA export from nucleus" evidence=IDA] [GO:0046833
"positive regulation of RNA export from nucleus" evidence=ISO]
[GO:0070618 "Grb2-Sos complex" evidence=ISO] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
MGI:MGI:893579 GO:GO:0005634 GO:GO:0045892 GO:GO:0016020
GO:GO:0006351 GO:GO:0003723 GO:GO:0007049 GO:GO:0007166
eggNOG:COG5176 GeneTree:ENSGT00550000074434 CTD:10657
HOVERGEN:HBG079164 KO:K13198 GO:GO:0046831 OMA:FMELSYL
OrthoDB:EOG4JHCGB ChiTaRS:KHDRBS1 EMBL:U17961 EMBL:U17046
EMBL:AK050520 EMBL:AK152084 EMBL:AL669834 EMBL:CU210913
EMBL:BC002051 IPI:IPI00458765 PIR:I49140 PIR:S43974
RefSeq:NP_035447.3 UniGene:Mm.489797 UniGene:Mm.8256
ProteinModelPortal:Q60749 SMR:Q60749 DIP:DIP-2861N IntAct:Q60749
STRING:Q60749 PhosphoSite:Q60749 PaxDb:Q60749 PRIDE:Q60749
Ensembl:ENSMUST00000066257 Ensembl:ENSMUST00000129342 GeneID:20218
KEGG:mmu:20218 UCSC:uc008uyd.1 InParanoid:B2KG38 NextBio:297827
Bgee:Q60749 Genevestigator:Q60749 GermOnline:ENSMUSG00000028790
Uniprot:Q60749
Length = 443
Score = 233 (87.1 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 48/120 (40%), Positives = 76/120 (63%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KP 201
R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P
Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
Query: 202 GYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL+ LNG
Sbjct: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLNG 276
Score = 61 (26.5 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 22 PHRSSSLPLDRE-RYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHER 79
P ++++ ++ E +YL EL+AE+ L P F + +LLS EI +I D E
Sbjct: 89 PSATAAVKMEPENKYLPELMAEKDSLDPSFTHAM----QLLSVEIEKIQKGESKKDDEEN 144
Query: 80 F 80
+
Sbjct: 145 Y 145
>RGD|621459 [details] [associations]
symbol:Khdrbs1 "KH domain containing, RNA binding, signal
transduction associated 1" species:10116 "Rattus norvegicus"
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISO;ISS;TAS] [GO:0005070
"SH3/SH2 adaptor activity" evidence=ISO;IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007166 "cell surface receptor
signaling pathway" evidence=ISO;IDA] [GO:0009966 "regulation of
signal transduction" evidence=NAS] [GO:0016020 "membrane"
evidence=ISO;ISS] [GO:0017124 "SH3 domain binding" evidence=IDA]
[GO:0032403 "protein complex binding" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0045948 "positive regulation of translational
initiation" evidence=ISO;ISS] [GO:0046831 "regulation of RNA export
from nucleus" evidence=ISO;ISS] [GO:0046833 "positive regulation of
RNA export from nucleus" evidence=ISO;ISS] [GO:0070618 "Grb2-Sos
complex" evidence=IDA] [GO:0031647 "regulation of protein
stability" evidence=ISO] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 RGD:621459 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0000086 GO:GO:0009966
GO:GO:0032403 GO:GO:0017124 GO:GO:0006351 GO:GO:0003723
GO:GO:0007166 eggNOG:COG5176 CTD:10657 HOGENOM:HOG000230771
HOVERGEN:HBG079164 KO:K13198 GO:GO:0046831 OrthoDB:EOG4JHCGB
EMBL:AF305619 EMBL:AF393783 EMBL:BC061987 IPI:IPI00205097
RefSeq:NP_569089.1 UniGene:Rn.92906 ProteinModelPortal:Q91V33
SMR:Q91V33 IntAct:Q91V33 STRING:Q91V33 PhosphoSite:Q91V33
PRIDE:Q91V33 GeneID:117268 KEGG:rno:117268 NextBio:620165
ArrayExpress:Q91V33 Genevestigator:Q91V33 GO:GO:0070618
Uniprot:Q91V33
Length = 443
Score = 233 (87.1 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 48/120 (40%), Positives = 76/120 (63%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KP 201
R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P
Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
Query: 202 GYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL+ LNG
Sbjct: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLNG 276
Score = 59 (25.8 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 22 PHRSSSLPLDRE-RYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHER 79
P +++ ++ E +YL EL+AE+ L P F + +LLS EI +I D E
Sbjct: 89 PSATAAAKMEPENKYLPELMAEKDSLDPSFTHAM----QLLSVEIEKIQKGESKKDDEEN 144
Query: 80 F 80
+
Sbjct: 145 Y 145
>UNIPROTKB|F1NLF2 [details] [associations]
symbol:KHDRBS1 "KH domain-containing, RNA-binding, signal
transduction-associated protein 1" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005070 "SH3/SH2
adaptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046831 "regulation of RNA export from nucleus" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0045892 GO:GO:0016020
GO:GO:0003723 GO:GO:0007166 GeneTree:ENSGT00550000074434
IPI:IPI00603250 GO:GO:0046831 OMA:FMELSYL EMBL:AADN02043780
EMBL:AADN02043781 EMBL:AADN02043782 Ensembl:ENSGALT00000005175
Uniprot:F1NLF2
Length = 433
Score = 233 (87.1 bits), Expect = 5.8e-23, Sum P(2) = 5.8e-23
Identities = 48/120 (40%), Positives = 76/120 (63%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KP 201
R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P
Sbjct: 142 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 201
Query: 202 GYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL+ LNG
Sbjct: 202 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLNG 259
Score = 57 (25.1 bits), Expect = 5.8e-23, Sum P(2) = 5.8e-23
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 8 GSYFQYPPSGVHASPHR-SSSLPLDRE-RYLAELLAERQKLGP-FVQVLPLCSRLLSQEI 64
GS P+ + +P ++ ++ E +YL EL+AE+ L P F + +LLS EI
Sbjct: 56 GSSGAQGPAAANPAPLLPGGAVKMEPENKYLPELMAEKDSLDPSFTHAM----QLLSAEI 111
Query: 65 RRI 67
+I
Sbjct: 112 EKI 114
>FB|FBgn0034740 [details] [associations]
symbol:nsr "novel spermatogenesis regulator" species:7227
"Drosophila melanogaster" [GO:0003723 "RNA binding"
evidence=ISM;IEA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0010608 "posttranscriptional regulation of gene expression"
evidence=IMP] [GO:0007291 "sperm individualization" evidence=IMP]
[GO:0007288 "sperm axoneme assembly" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 EMBL:AE013599 GO:GO:0016607 GO:GO:0003723
GO:GO:0007291 HSSP:Q9BW01 GeneTree:ENSGT00550000074434
GO:GO:0007288 GO:GO:0010608 RefSeq:NP_611682.1
ProteinModelPortal:Q9W224 SMR:Q9W224 MINT:MINT-834857 STRING:Q9W224
EnsemblMetazoa:FBtr0071861 GeneID:37577 KEGG:dme:Dmel_CG3875
UCSC:CG3875-RA CTD:37577 FlyBase:FBgn0034740 InParanoid:Q9W224
OrthoDB:EOG4SXKV2 PhylomeDB:Q9W224 GenomeRNAi:37577 NextBio:804376
ArrayExpress:Q9W224 Bgee:Q9W224 Uniprot:Q9W224
Length = 340
Score = 221 (82.9 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 48/116 (41%), Positives = 76/116 (65%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDK--PGYE 204
VPV+K+P FNF +ILGP+GNS++R++ T C++ I+GR S++D KEE+L+ P Y
Sbjct: 92 VPVNKFPKFNFARKILGPKGNSVRRLKEETNCKIVIKGRSSMRDRNKEEELRSSGDPRYA 151
Query: 205 HLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLN 260
HL++ L + V A P +R+ +A+A + L P D++ D + +QQ REL +N
Sbjct: 152 HLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIP-DDNDDVWHEQQ-RELMEMN 205
Score = 59 (25.8 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 33 ERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRI--TGYNPSFVDHERFEHDSPFR 87
+++LA+L ER++L PLC+ L+ + + R+ TG P + H P +
Sbjct: 32 QKFLADLDEERKRLSA---EFPLCALLIDESVDRVFSTGRIPGKEFYADVYHQRPMK 85
>UNIPROTKB|F1P522 [details] [associations]
symbol:QKI "Protein quaking" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 GO:GO:0003723
GeneTree:ENSGT00550000074434 EMBL:AADN02035543 EMBL:AADN02035544
IPI:IPI01017166 Ensembl:ENSGALT00000031822 ArrayExpress:F1P522
Uniprot:F1P522
Length = 186
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 51/104 (49%), Positives = 74/104 (71%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKP 240
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLIP 181
>FB|FBgn0022984 [details] [associations]
symbol:qkr58E-3 "quaking related 58E-3" species:7227
"Drosophila melanogaster" [GO:0003723 "RNA binding"
evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003729
"mRNA binding" evidence=NAS] [GO:0006915 "apoptotic process"
evidence=IGI;IMP;IPI] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0016607 "nuclear
speck" evidence=IDA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0006915
GO:GO:0016607 GO:GO:0003723 HSSP:Q9BW01 GO:GO:0000381
FlyBase:FBgn0022984 EMBL:AY058724 ProteinModelPortal:Q95TJ8
DIP:DIP-21348N IntAct:Q95TJ8 MINT:MINT-310636 STRING:Q95TJ8
PRIDE:Q95TJ8 InParanoid:Q95TJ8 ArrayExpress:Q95TJ8 Bgee:Q95TJ8
Uniprot:Q95TJ8
Length = 320
Score = 218 (81.8 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 47/112 (41%), Positives = 71/112 (63%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDK--PGYE 204
VPV +YP FNF G+ILGP+GNSL+R++ T+C++ I+GR S++D KEE+L+ P Y
Sbjct: 89 VPVKQYPKFNFTGKILGPKGNSLRRLQEETQCKIAIKGRSSIRDRNKEEQLRSTGDPRYA 148
Query: 205 HLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
HL + L + V +R+ +A+A + L P D++ D +QLREL
Sbjct: 149 HLQKDLFLEVSTVATPAECYARIAYALAEIRKYLIP-DKN-DEVSHEQLREL 198
Score = 60 (26.2 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 6 TPGSYFQ-YPPSGVHASPHRSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEI 64
TP + + PP+ H P R + + +++LA+L ERQ+L PLC+ L+ + +
Sbjct: 6 TPSEFTEKQPPTHDH-QP-RLNEVA---QKFLADLDEERQRLSAD---FPLCALLIDEAV 57
Query: 65 RRI--TGYNP 72
R+ TG P
Sbjct: 58 DRVYCTGRIP 67
>UNIPROTKB|Q8UUW7 [details] [associations]
symbol:KHDRBS1 "KH domain-containing, RNA-binding, signal
transduction-associated protein 1" species:9031 "Gallus gallus"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=IDA] [GO:0007166 "cell
surface receptor signaling pathway" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0016020 "membrane" evidence=ISS] [GO:0045948
"positive regulation of translational initiation" evidence=ISS]
[GO:0046833 "positive regulation of RNA export from nucleus"
evidence=ISS] [GO:0046831 "regulation of RNA export from nucleus"
evidence=ISS] [GO:0005070 "SH3/SH2 adaptor activity" evidence=ISS]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0045892 GO:GO:0000086
GO:GO:0016020 GO:GO:0005070 GO:GO:0006351 GO:GO:0003723
GO:GO:0007166 eggNOG:COG5176 EMBL:AY057837 IPI:IPI00603250
RefSeq:NP_989561.1 UniGene:Gga.3874 ProteinModelPortal:Q8UUW7
SMR:Q8UUW7 STRING:Q8UUW7 PRIDE:Q8UUW7 GeneID:374071 KEGG:gga:374071
CTD:10657 HOGENOM:HOG000230771 HOVERGEN:HBG079164 InParanoid:Q8UUW7
KO:K13198 NextBio:20813592 GO:GO:0046831 Uniprot:Q8UUW7
Length = 433
Score = 233 (87.1 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 48/120 (40%), Positives = 76/120 (63%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KP 201
R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P
Sbjct: 142 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 201
Query: 202 GYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL+ LNG
Sbjct: 202 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLNG 259
Score = 51 (23.0 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 8 GSYFQYPPSGVHASPHR-SSSLPLDRE-RYLAELLAERQKLGPFVQVLPLCSRLLSQEIR 65
GS P+ + +P ++ ++ E +YL EL+AE+ L P +LLS EI
Sbjct: 56 GSSGAQGPAAANPAPLLPGGAVKMEPENKYLPELMAEKDSLDPSSTH---AMQLLSAEIE 112
Query: 66 RI 67
+I
Sbjct: 113 KI 114
>WB|WBGene00022101 [details] [associations]
symbol:Y69A2AR.32 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0010171 GO:GO:0040018 GO:GO:0003723
GeneTree:ENSGT00550000074434 EMBL:FO081818 RefSeq:NP_741340.2
ProteinModelPortal:H2L0S1 PRIDE:H2L0S1 EnsemblMetazoa:Y69A2AR.32a
GeneID:177042 KEGG:cel:CELE_Y69A2AR.32 CTD:177042
WormBase:Y69A2AR.32a OMA:PLHVYIE Uniprot:H2L0S1
Length = 384
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 54/132 (40%), Positives = 79/132 (59%)
Query: 145 LDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKL-KDKPGY 203
L VPV+KYP +NFVGRILGPRG ++K++E T CR+F+RGR S S E K K P +
Sbjct: 75 LMVPVEKYPKYNFVGRILGPRGMTVKQLEKETGCRIFVRGRASTTASNPESKPNKSTPSF 134
Query: 204 EH-----------LNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQ 252
EPLHV +E + + +++ HAV +++ LL P + D K+QQ
Sbjct: 135 SKPSLSIISRNALTEEPLHVYIECQDTQSAAQAKMAHAVEVIQRLLSPPKDGKDELKRQQ 194
Query: 253 LRELAMLNGTLR 264
L +++++NGT R
Sbjct: 195 LVDISLINGTYR 206
>ZFIN|ZDB-GENE-000210-25 [details] [associations]
symbol:khdrbs1a "KH domain containing, RNA binding,
signal transduction associated 1a" species:7955 "Danio rerio"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
ZFIN:ZDB-GENE-000210-25 GO:GO:0003723 EMBL:CR376783
GeneTree:ENSGT00550000074434 HOGENOM:HOG000230771
HOVERGEN:HBG079164 EMBL:BC067717 IPI:IPI00504880 RefSeq:NP_571000.1
UniGene:Dr.153239 STRING:Q6NW56 Ensembl:ENSDART00000074787
GeneID:30082 KEGG:dre:30082 CTD:30082 InParanoid:Q6NW56 OMA:ADTEYYD
NextBio:20806567 Uniprot:Q6NW56
Length = 370
Score = 215 (80.7 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 46/120 (38%), Positives = 71/120 (59%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KP 201
R+ +PV +YP FNFVG+ILGP+G+++KR++ T ++ + G+GS++D KEE+L+ P
Sbjct: 72 RVLIPVKQYPRFNFVGKILGPQGSTIKRLQEDTGAKISVLGKGSMRDKNKEEELRKGGDP 131
Query: 202 GYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
Y HL LHV +E P R+ HA+ ++ L PV E +D + LNG
Sbjct: 132 KYAHLGMELHVHIEVFAPIPDCYLRMAHAMDEVKKFLMPV-EGMDEMHPDAFMDPGFLNG 190
Score = 54 (24.1 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 34 RYLAELLAERQKL-GPFVQVLPLCSRLLSQEIRRITGYNP 72
+YL ELLAE+ L F + +LLS EI R+ P
Sbjct: 16 KYLPELLAEKDSLDSSFTHAM----KLLSAEIERVQKGEP 51
>UNIPROTKB|F1NKE9 [details] [associations]
symbol:KHDRBS3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR004087 SMART:SM00322
GO:GO:0005634 GO:GO:0003723 GeneTree:ENSGT00550000074434
OMA:ETYGEYE EMBL:AADN02037546 EMBL:AADN02037547 IPI:IPI00813297
Ensembl:ENSGALT00000026120 Uniprot:F1NKE9
Length = 327
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 54/118 (45%), Positives = 79/118 (66%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG---Y 203
+PV ++P FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ K G Y
Sbjct: 44 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKTKEEELR-KSGEAKY 102
Query: 204 EHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
HLN+ LHVL+E P +R+ HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 103 FHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP-DYN-DEIRQAQLQELTYLNG 158
>UNIPROTKB|F1RRV9 [details] [associations]
symbol:KHDRBS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
SMART:SM00322 GO:GO:0003723 OMA:ETYGEYE EMBL:CU151851
Ensembl:ENSSSCT00000006524 Uniprot:F1RRV9
Length = 300
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 54/118 (45%), Positives = 79/118 (66%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG---Y 203
+PV ++P FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ K G Y
Sbjct: 16 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELR-KSGEAKY 74
Query: 204 EHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
HLN+ LHVL+E P +R+ HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 75 FHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP-DYN-DEIRQAQLQELTYLNG 130
>UNIPROTKB|I3LAN7 [details] [associations]
symbol:LOC100625959 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 SMART:SM00322 GO:GO:0003723
GeneTree:ENSGT00550000074434 Ensembl:ENSSSCT00000023135 OMA:PEMNDEI
Uniprot:I3LAN7
Length = 151
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 54/118 (45%), Positives = 79/118 (66%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG---Y 203
+PV ++P FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ K G Y
Sbjct: 9 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELR-KSGEAKY 67
Query: 204 EHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
HLN+ LHVL+E P +R+ HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 68 FHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP-DYN-DEIRQAQLQELTYLNG 123
>UNIPROTKB|F5H8C8 [details] [associations]
symbol:QKI "Protein quaking" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0042692
"muscle cell differentiation" evidence=IEA] [GO:0042759 "long-chain
fatty acid biosynthetic process" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 GO:GO:0007286
GO:GO:0003723 GO:GO:0042692 GO:GO:0042759 GO:GO:0042552
GO:GO:0010628 GO:GO:0001570 EMBL:AL356119 EMBL:AL031781
HGNC:HGNC:21100 ChiTaRS:QKI IPI:IPI01010211
ProteinModelPortal:F5H8C8 SMR:F5H8C8 Ensembl:ENST00000544436
ArrayExpress:F5H8C8 Bgee:F5H8C8 Uniprot:F5H8C8
Length = 100
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 44/78 (56%), Positives = 62/78 (79%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 23 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 82
Query: 197 LKDKPGYEHLNEPLHVLV 214
+ KP +EHLNE LHVL+
Sbjct: 83 NRGKPNWEHLNEDLHVLI 100
>DICTYBASE|DDB_G0293554 [details] [associations]
symbol:sf1 "CCHC-type zinc finger-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0000243 "commitment
complex" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50158 SMART:SM00322
SMART:SM00343 dictyBase:DDB_G0293554 GenomeReviews:CM000155_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0000398
EMBL:AAFI02000218 HSSP:Q9BW01 eggNOG:COG5176 KO:K13095
RefSeq:XP_629004.1 ProteinModelPortal:Q54BM5
EnsemblProtists:DDB0233391 GeneID:8629288 KEGG:ddi:DDB_G0293554
InParanoid:Q54BM5 OMA:ENDELHV GO:GO:0000243 Uniprot:Q54BM5
Length = 501
Score = 250 (93.1 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 74/221 (33%), Positives = 116/221 (52%)
Query: 51 QVLPLCSRLLSQEIRRITGYNP-SFVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEE 109
Q+ L RL EI + P F + +R SP + R E + ++
Sbjct: 91 QIAALILRLRVDEITKKITIGPIEFTERDRERSPSPPPTYDNNGKRSNTREQRIKEKLQK 150
Query: 110 NGH-----LQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGP 164
H Q++ P PPS +Q P P K+ ++ +P+ +P +NF+G I+GP
Sbjct: 151 ERHQLVVTAQQINPTYKPPS-DYQ-----P--PNEKKTRKIYIPIKNHPEYNFIGLIIGP 202
Query: 165 RGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIIN 224
RGN+ KR+E + ++ IRG+GS +D K KL+ ++ N+ LHVL+ A D ++
Sbjct: 203 RGNTQKRMEKESGAKIAIRGKGSSRDG-KPTKLQ----FQE-NDELHVLLTA----DTVD 252
Query: 225 SRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 265
+LD A ++ L PV+E + +K+QQLRELA +NGTLRE
Sbjct: 253 -QLDKAEVLVREFLIPVEEGKNEHKRQQLRELAEMNGTLRE 292
>WB|WBGene00044674 [details] [associations]
symbol:B0280.17 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0008219 "cell death" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0009792 GO:GO:0008219 GO:GO:0000003 GO:GO:0003723
eggNOG:COG5176 GeneTree:ENSGT00550000074434 EMBL:FO080148
RefSeq:NP_001040836.2 ProteinModelPortal:Q2V4X2 SMR:Q2V4X2
EnsemblMetazoa:B0280.17 GeneID:4363051 KEGG:cel:CELE_B0280.17
UCSC:B0280.17 CTD:4363051 WormBase:B0280.17 HOGENOM:HOG000020938
InParanoid:Q2V4X2 OMA:IRGKGCT NextBio:959623 Uniprot:Q2V4X2
Length = 260
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 45/126 (35%), Positives = 80/126 (63%)
Query: 140 KRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD 199
+++ ++ P + N N VGR++GPRG +++++E C++FIRG+G KD KEE+L++
Sbjct: 138 EKIDKVFFPPETANNTNPVGRLIGPRGMTIRQLEKDLGCKLFIRGKGCTKDDAKEERLRE 197
Query: 200 KPGYEHLNEPLHVLVEAEFP-EDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAM 258
+ G+EHL EP+HV++ E+ + +L +L+ L+ D L K+ QL +LA+
Sbjct: 198 RVGWEHLKEPIHVMISVRSDSEEAASEKLSSIKKMLQEFLEHTDSEL---KRSQLMQLAV 254
Query: 259 LNGTLR 264
+ GTL+
Sbjct: 255 IEGTLK 260
>FB|FBgn0022985 [details] [associations]
symbol:qkr58E-2 "quaking related 58E-2" species:7227
"Drosophila melanogaster" [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 EMBL:AE013599
GO:GO:0003723 HSSP:Q9BW01 GeneTree:ENSGT00550000074434
FlyBase:FBgn0022985 EMBL:BT021292 RefSeq:NP_523810.2
UniGene:Dm.7238 SMR:Q9W254 EnsemblMetazoa:FBtr0071828 GeneID:37562
KEGG:dme:Dmel_CG5821 UCSC:CG5821-RA CTD:37562 InParanoid:Q9W254
OMA:LRNSADA GenomeRNAi:37562 NextBio:804299 Uniprot:Q9W254
Length = 416
Score = 212 (79.7 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 47/120 (39%), Positives = 75/120 (62%)
Query: 139 VKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK 198
+K ++ VP+ K FN+VG++LGP+GNSL+R++ T+C++ I GR S+KD +EE+L+
Sbjct: 126 IKLSQKVHVPI-KDKKFNYVGKLLGPKGNSLRRLQEETQCKIVILGRFSMKDRAREEELR 184
Query: 199 DKPG--YEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ Y HLN PLHV V P +R+ +A+A + L P + D +++Q REL
Sbjct: 185 NSADAKYAHLNLPLHVEVSTIAPPAEAYARVAYALAEIRRYLTP--DKHDDIRQEQYREL 242
Score = 47 (21.6 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 33 ERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRI 67
++Y+ EL+ ER ++ PL +L+ + + R+
Sbjct: 74 QKYMQELMTERSRMENH---FPLAVKLIDEALERV 105
>FB|FBgn0022987 [details] [associations]
symbol:qkr54B "quaking related 54B" species:7227 "Drosophila
melanogaster" [GO:0003723 "RNA binding" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0003729 "mRNA binding" evidence=NAS]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
EMBL:AE013599 GO:GO:0005737 GO:GO:0003723
GeneTree:ENSGT00550000074434 KO:K14942 RefSeq:NP_523772.1
RefSeq:NP_725679.1 RefSeq:NP_725680.2 UniGene:Dm.667 GeneID:36966
KEGG:dme:Dmel_CG4816 CTD:36966 FlyBase:FBgn0022987 GenomeRNAi:36966
NextBio:801273 EMBL:AF096272 EMBL:AY095201 SMR:Q7KNS5
EnsemblMetazoa:FBtr0086923 EnsemblMetazoa:FBtr0086925
EnsemblMetazoa:FBtr0306248 UCSC:CG4816-RA InParanoid:Q7KNS5
OMA:AYARIAY Uniprot:Q7KNS5
Length = 428
Score = 236 (88.1 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 49/115 (42%), Positives = 76/115 (66%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDK--P 201
R+ VP+ ++P FNFVG++LGP+GNSL+R++ T C++ + GR S++D +KEE+L+ P
Sbjct: 124 RVLVPIREHPKFNFVGKLLGPKGNSLRRLQEETLCKMTVLGRNSMRDRVKEEELRSSKDP 183
Query: 202 GYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
Y HLN LHV + P +R+ +A+A L L P +S D +++QLREL
Sbjct: 184 KYAHLNSDLHVEISTIAPPAEAYARIAYAMAELRKYLIP--DSNDIIRQEQLREL 236
>RGD|620645 [details] [associations]
symbol:Sf1 "splicing factor 1" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0006917 "induction of apoptosis"
evidence=NAS] [GO:0022402 "cell cycle process" evidence=ISO]
[GO:0030238 "male sex determination" evidence=ISO] [GO:0033327
"Leydig cell differentiation" evidence=ISO] [GO:0048662 "negative
regulation of smooth muscle cell proliferation" evidence=IMP]
[GO:0050810 "regulation of steroid biosynthetic process"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:620645 GO:GO:0006917 GO:GO:0033327 GO:GO:0050810
GO:GO:0005681 GO:GO:0003723 GO:GO:0048662 HSSP:Q9BW01
eggNOG:COG5176 GO:GO:0022402 GO:GO:0030238 HOGENOM:HOG000237321
OrthoDB:EOG4VHK6F IPI:IPI00558327 EMBL:AF079873 UniGene:Rn.1074
UniGene:Rn.220071 STRING:O88629 UCSC:RGD:620645 InParanoid:O88629
ArrayExpress:O88629 Genevestigator:O88629 Uniprot:O88629
Length = 173
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 58/136 (42%), Positives = 79/136 (58%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIK 193
P T V +V+ +P D+YP NFVG ++GPRGN+LK +E ++ IRG+GSVK+ K
Sbjct: 21 PATRVSDKVM---IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEG-K 76
Query: 194 EEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKP---VDESLDHYKK 250
+ KD +EPLH LV A E++ AV + N+LK E + +K
Sbjct: 77 VGR-KDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 130
Query: 251 QQLRELAMLNGTLREE 266
QLRELA LNGTLRE+
Sbjct: 131 MQLRELARLNGTLRED 146
>SGD|S000004106 [details] [associations]
symbol:MSL5 "Component of the commitment complex"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000243 "commitment
complex" evidence=IDA] [GO:0045131 "pre-mRNA branch point binding"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084 PROSITE:PS50158
SMART:SM00322 SMART:SM00343 InterPro:IPR013041 SGD:S000004106
GO:GO:0046872 GO:GO:0008270 EMBL:BK006945 EMBL:X89514
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 SUPFAM:SSF49348
EMBL:U53877 GO:GO:0000398 KO:K13095 GO:GO:0000243
HOGENOM:HOG000197271 OrthoDB:EOG4HQHTF EMBL:Z73288 PIR:S64953
RefSeq:NP_013217.1 PDB:3FMA PDBsum:3FMA ProteinModelPortal:Q12186
SMR:Q12186 DIP:DIP-991N IntAct:Q12186 MINT:MINT-489287
STRING:Q12186 PaxDb:Q12186 EnsemblFungi:YLR116W GeneID:850807
KEGG:sce:YLR116W CYGD:YLR116w GeneTree:ENSGT00550000074434
OMA:PPASHIS EvolutionaryTrace:Q12186 NextBio:967037
Genevestigator:Q12186 GermOnline:YLR116W GO:GO:0045131
Uniprot:Q12186
Length = 476
Score = 235 (87.8 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 52/123 (42%), Positives = 79/123 (64%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHL 206
+PVD+YP+ NFVG +LGPRG +L++++ + C++ IRGRGSVK+ L PG +
Sbjct: 154 IPVDQYPDVNFVGLLLGPRGRTLRKLQEDSNCKIAIRGRGSVKEGKNASDLP--PGAMNF 211
Query: 207 NEPLHVLVEAEFPEDIINSRLDHAVAILENL-LKPVD--ESLDHYKKQQLRELAMLNGTL 263
+PLH L+ A+ ED ++ + + +N+ +K V E + K+ QLRELA LNGTL
Sbjct: 212 EDPLHCLIIAD-SED----KIQKGIKVCQNIVIKAVTSPEGQNDLKRGQLRELAELNGTL 266
Query: 264 REE 266
RE+
Sbjct: 267 RED 269
>UNIPROTKB|B4DX42 [details] [associations]
symbol:SF1 "Splicing factor 1" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0022402 "cell cycle process"
evidence=IEA] [GO:0030238 "male sex determination" evidence=IEA]
[GO:0033327 "Leydig cell differentiation" evidence=IEA] [GO:0050810
"regulation of steroid biosynthetic process" evidence=IEA]
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084 PROSITE:PS50158
SMART:SM00322 SMART:SM00343 GO:GO:0033327 GO:GO:0050810
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0048662
Gene3D:4.10.60.10 GO:GO:0022402 GO:GO:0030238 EMBL:AP001462
UniGene:Hs.502829 HGNC:HGNC:12950 HOVERGEN:HBG063318 ChiTaRS:SF1
EMBL:AK301803 IPI:IPI00386118 SMR:B4DX42 STRING:B4DX42
Ensembl:ENST00000422298 UCSC:uc010rnm.2 Uniprot:B4DX42
Length = 433
Score = 230 (86.0 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 58/136 (42%), Positives = 79/136 (58%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIK 193
P T V +V+ +P D+YP NFVG ++GPRGN+LK +E ++ IRG+GSVK+ K
Sbjct: 17 PATRVSDKVM---IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEG-K 72
Query: 194 EEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKP---VDESLDHYKK 250
+ KD +EPLH LV A E++ AV + N+LK E + +K
Sbjct: 73 VGR-KDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 126
Query: 251 QQLRELAMLNGTLREE 266
QLRELA LNGTLRE+
Sbjct: 127 MQLRELARLNGTLRED 142
>UNIPROTKB|F1LM37 [details] [associations]
symbol:Sf1 "Protein Sf1" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084
PROSITE:PS50158 SMART:SM00322 SMART:SM00343 RGD:620645
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10
GeneTree:ENSGT00550000074434 IPI:IPI00558327
Ensembl:ENSRNOT00000044866 ArrayExpress:F1LM37 Uniprot:F1LM37
Length = 548
Score = 230 (86.0 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 58/136 (42%), Positives = 79/136 (58%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIK 193
P T V +V+ +P D+YP NFVG ++GPRGN+LK +E ++ IRG+GSVK+ K
Sbjct: 132 PATRVSDKVM---IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEG-K 187
Query: 194 EEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKP---VDESLDHYKK 250
+ KD +EPLH LV A E++ AV + N+LK E + +K
Sbjct: 188 VGR-KDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 241
Query: 251 QQLRELAMLNGTLREE 266
QLRELA LNGTLRE+
Sbjct: 242 MQLRELARLNGTLRED 257
>UNIPROTKB|E2RRT4 [details] [associations]
symbol:SF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001878
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098
PROSITE:PS50084 PROSITE:PS50158 SMART:SM00322 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GeneTree:ENSGT00550000074434 OMA:GDGPSHE EMBL:AAEX03011644
ProteinModelPortal:E2RRT4 Ensembl:ENSCAFT00000022618 Uniprot:E2RRT4
Length = 638
Score = 230 (86.0 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 58/136 (42%), Positives = 79/136 (58%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIK 193
P T V +V+ +P D+YP NFVG ++GPRGN+LK +E ++ IRG+GSVK+ K
Sbjct: 132 PATRVSDKVM---IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEG-K 187
Query: 194 EEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKP---VDESLDHYKK 250
+ KD +EPLH LV A E++ AV + N+LK E + +K
Sbjct: 188 VGR-KDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 241
Query: 251 QQLRELAMLNGTLREE 266
QLRELA LNGTLRE+
Sbjct: 242 MQLRELARLNGTLRED 257
>UNIPROTKB|A2VDM7 [details] [associations]
symbol:SF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050810 "regulation of steroid biosynthetic process"
evidence=IEA] [GO:0033327 "Leydig cell differentiation"
evidence=IEA] [GO:0030238 "male sex determination" evidence=IEA]
[GO:0022402 "cell cycle process" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084 PROSITE:PS50158
SMART:SM00322 SMART:SM00343 GO:GO:0033327 GO:GO:0050810
GO:GO:0046872 GO:GO:0008270 GO:GO:0005681 GO:GO:0003723
eggNOG:COG5176 KO:K13095 GeneTree:ENSGT00550000074434 GO:GO:0022402
GO:GO:0030238 CTD:7536 HOVERGEN:HBG063318 OMA:GDGPSHE
EMBL:DAAA02063538 EMBL:BC133313 IPI:IPI00729661 IPI:IPI00999378
RefSeq:NP_001075083.1 UniGene:Bt.7991 SMR:A2VDM7 STRING:A2VDM7
Ensembl:ENSBTAT00000001376 GeneID:541229 KEGG:bta:541229
NextBio:20879080 Uniprot:A2VDM7
Length = 639
Score = 230 (86.0 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 58/136 (42%), Positives = 79/136 (58%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIK 193
P T V +V+ +P D+YP NFVG ++GPRGN+LK +E ++ IRG+GSVK+ K
Sbjct: 132 PATRVSDKVM---IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEG-K 187
Query: 194 EEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKP---VDESLDHYKK 250
+ KD +EPLH LV A E++ AV + N+LK E + +K
Sbjct: 188 VGR-KDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 241
Query: 251 QQLRELAMLNGTLREE 266
QLRELA LNGTLRE+
Sbjct: 242 MQLRELARLNGTLRED 257
>UNIPROTKB|Q15637 [details] [associations]
symbol:SF1 "Splicing factor 1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0022402 "cell cycle process" evidence=IEA] [GO:0030238 "male
sex determination" evidence=IEA] [GO:0033327 "Leydig cell
differentiation" evidence=IEA] [GO:0050810 "regulation of steroid
biosynthetic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0000245 "spliceosomal complex assembly"
evidence=NAS] [GO:0005840 "ribosome" evidence=NAS] [GO:0003676
"nucleic acid binding" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0003714 "transcription corepressor activity"
evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IDA]
[GO:0000389 "mRNA 3'-splice site recognition" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001878
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098
PROSITE:PS50084 PROSITE:PS50158 SMART:SM00322 SMART:SM00343
GO:GO:0005634 GO:GO:0003714 GO:GO:0006355 GO:GO:0033327
GO:GO:0050810 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0005840 GO:GO:0048662
eggNOG:COG5176 KO:K13095 GO:GO:0022402 GO:GO:0030238 GO:GO:0000389
EMBL:AP001462 EMBL:Y08765 EMBL:Y08766 EMBL:L49345 EMBL:L49380
EMBL:D26120 EMBL:AK293753 EMBL:BC000773 EMBL:BC008080 EMBL:BC008724
EMBL:BC011657 EMBL:BC020217 EMBL:BC038446 EMBL:AJ000051
EMBL:AJ000052 IPI:IPI00294627 IPI:IPI00386114 IPI:IPI00386117
IPI:IPI00386119 IPI:IPI00386120 IPI:IPI00852591 IPI:IPI00941553
PIR:G02919 RefSeq:NP_001171501.1 RefSeq:NP_001171502.1
RefSeq:NP_004621.2 RefSeq:NP_973724.1 RefSeq:NP_973726.2
RefSeq:NP_973727.1 UniGene:Hs.502829 PDB:1K1G PDB:4FXW PDB:4FXX
PDBsum:1K1G PDBsum:4FXW PDBsum:4FXX ProteinModelPortal:Q15637
SMR:Q15637 DIP:DIP-29410N IntAct:Q15637 MINT:MINT-1582417
STRING:Q15637 DMDM:38258418 PaxDb:Q15637 PRIDE:Q15637 DNASU:7536
Ensembl:ENST00000227503 Ensembl:ENST00000334944
Ensembl:ENST00000377387 Ensembl:ENST00000377390
Ensembl:ENST00000377394 Ensembl:ENST00000433274 GeneID:7536
KEGG:hsa:7536 UCSC:uc001oaz.2 UCSC:uc001oba.2 UCSC:uc001obb.2
UCSC:uc001obc.2 UCSC:uc001obd.2 CTD:7536 GeneCards:GC11M064532
HGNC:HGNC:12950 HPA:HPA018883 MIM:601516 neXtProt:NX_Q15637
PharmGKB:PA37533 HOVERGEN:HBG063318 ChiTaRS:SF1
EvolutionaryTrace:Q15637 GenomeRNAi:7536 NextBio:29487
ArrayExpress:Q15637 Bgee:Q15637 CleanEx:HS_SF1
Genevestigator:Q15637 GermOnline:ENSG00000168066 Uniprot:Q15637
Length = 639
Score = 230 (86.0 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 58/136 (42%), Positives = 79/136 (58%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIK 193
P T V +V+ +P D+YP NFVG ++GPRGN+LK +E ++ IRG+GSVK+ K
Sbjct: 132 PATRVSDKVM---IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEG-K 187
Query: 194 EEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKP---VDESLDHYKK 250
+ KD +EPLH LV A E++ AV + N+LK E + +K
Sbjct: 188 VGR-KDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 241
Query: 251 QQLRELAMLNGTLREE 266
QLRELA LNGTLRE+
Sbjct: 242 MQLRELARLNGTLRED 257
>UNIPROTKB|F1RQR0 [details] [associations]
symbol:SF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050810 "regulation of steroid biosynthetic process"
evidence=IEA] [GO:0033327 "Leydig cell differentiation"
evidence=IEA] [GO:0030238 "male sex determination" evidence=IEA]
[GO:0022402 "cell cycle process" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084 PROSITE:PS50158
SMART:SM00322 SMART:SM00343 GO:GO:0033327 GO:GO:0050810
GO:GO:0046872 GO:GO:0008270 GO:GO:0005681 GO:GO:0003723
GeneTree:ENSGT00550000074434 GO:GO:0022402 GO:GO:0030238
OMA:GDGPSHE EMBL:FP101995 Ensembl:ENSSSCT00000014232
ArrayExpress:F1RQR0 Uniprot:F1RQR0
Length = 639
Score = 230 (86.0 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 58/136 (42%), Positives = 79/136 (58%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIK 193
P T V +V+ +P D+YP NFVG ++GPRGN+LK +E ++ IRG+GSVK+ K
Sbjct: 132 PATRVSDKVM---IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEG-K 187
Query: 194 EEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKP---VDESLDHYKK 250
+ KD +EPLH LV A E++ AV + N+LK E + +K
Sbjct: 188 VGR-KDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 241
Query: 251 QQLRELAMLNGTLREE 266
QLRELA LNGTLRE+
Sbjct: 242 MQLRELARLNGTLRED 257
>MGI|MGI:1095403 [details] [associations]
symbol:Sf1 "splicing factor 1" species:10090 "Mus musculus"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0022402
"cell cycle process" evidence=IGI] [GO:0030238 "male sex
determination" evidence=IGI] [GO:0033327 "Leydig cell
differentiation" evidence=IGI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048662 "negative regulation of smooth muscle
cell proliferation" evidence=ISO] [GO:0050810 "regulation of
steroid biosynthetic process" evidence=IGI] InterPro:IPR001878
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098
PROSITE:PS50084 PROSITE:PS50158 SMART:SM00322 SMART:SM00343
MGI:MGI:1095403 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0008380 GO:GO:0033327 GO:GO:0050810 GO:GO:0046872
GO:GO:0008270 GO:GO:0006397 GO:GO:0006351 GO:GO:0005681
GO:GO:0003723 GO:GO:0048662 Gene3D:4.10.60.10 eggNOG:COG5176
GeneTree:ENSGT00550000074434 GO:GO:0022402 GO:GO:0030238
EMBL:AC127556 HOVERGEN:HBG063318 ChiTaRS:SF1 EMBL:X80159
EMBL:X85802 EMBL:Y08907 EMBL:Y12838 EMBL:AC167245 EMBL:BC009091
EMBL:BC055370 IPI:IPI00116284 IPI:IPI00387376 IPI:IPI01008154
UniGene:Mm.256422 ProteinModelPortal:Q64213 SMR:Q64213
STRING:Q64213 PhosphoSite:Q64213 PaxDb:Q64213 PRIDE:Q64213
Ensembl:ENSMUST00000131252 HOGENOM:HOG000237321 InParanoid:Q64213
OMA:GDGPSHE Bgee:Q64213 CleanEx:MM_SF1 Genevestigator:Q64213
GermOnline:ENSMUSG00000024949 Uniprot:Q64213
Length = 653
Score = 230 (86.0 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 58/136 (42%), Positives = 79/136 (58%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIK 193
P T V +V+ +P D+YP NFVG ++GPRGN+LK +E ++ IRG+GSVK+ K
Sbjct: 132 PATRVSDKVM---IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEG-K 187
Query: 194 EEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKP---VDESLDHYKK 250
+ KD +EPLH LV A E++ AV + N+LK E + +K
Sbjct: 188 VGR-KDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 241
Query: 251 QQLRELAMLNGTLREE 266
QLRELA LNGTLRE+
Sbjct: 242 MQLRELARLNGTLRED 257
>UNIPROTKB|F1LSC3 [details] [associations]
symbol:Sf1 "Protein Sf1" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084
PROSITE:PS50158 SMART:SM00322 SMART:SM00343 RGD:620645
GO:GO:0033327 GO:GO:0050810 GO:GO:0046872 GO:GO:0008270
GO:GO:0005681 GO:GO:0003723 Gene3D:4.10.60.10
GeneTree:ENSGT00550000074434 GO:GO:0022402 GO:GO:0030238
IPI:IPI00561804 PRIDE:F1LSC3 Ensembl:ENSRNOT00000028628
ArrayExpress:F1LSC3 Uniprot:F1LSC3
Length = 653
Score = 230 (86.0 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 58/136 (42%), Positives = 79/136 (58%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIK 193
P T V +V+ +P D+YP NFVG ++GPRGN+LK +E ++ IRG+GSVK+ K
Sbjct: 132 PATRVSDKVM---IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEG-K 187
Query: 194 EEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKP---VDESLDHYKK 250
+ KD +EPLH LV A E++ AV + N+LK E + +K
Sbjct: 188 VGR-KDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 241
Query: 251 QQLRELAMLNGTLREE 266
QLRELA LNGTLRE+
Sbjct: 242 MQLRELARLNGTLRED 257
>POMBASE|SPCC962.06c [details] [associations]
symbol:bpb1 "zinc finger splicing factor Bpb1"
species:4896 "Schizosaccharomyces pombe" [GO:0000243 "commitment
complex" evidence=IDA] [GO:0000349 "generation of catalytic
spliceosome for first transesterification step" evidence=IDA]
[GO:0003723 "RNA binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084
PROSITE:PS50158 SMART:SM00322 SMART:SM00343 PomBase:SPCC962.06c
GO:GO:0005829 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 HSSP:Q9BW01 KO:K13095 GO:GO:0000243 EMBL:AF073779
PIR:T41653 RefSeq:NP_587871.1 ProteinModelPortal:O74555 SMR:O74555
STRING:O74555 EnsemblFungi:SPCC962.06c.1 GeneID:2538832
KEGG:spo:SPCC962.06c HOGENOM:HOG000197271 OMA:RIEEISH
OrthoDB:EOG4HQHTF NextBio:20800014 GO:GO:0000349 Uniprot:O74555
Length = 587
Score = 226 (84.6 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 53/124 (42%), Positives = 79/124 (63%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYE-H 205
VPV YP NF+G ++GPRG++LK +EA + ++ IRG+GSVK E K + P +
Sbjct: 192 VPVKDYPEINFIGLLIGPRGHTLKDMEAKSGAKIAIRGKGSVK----EGKGRSDPSVRGN 247
Query: 206 LNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKP---VDESLDHYKKQQLRELAMLNGT 262
+ E LH LV A+ ED IN HA+ +++N+++ V E + K+ QLR+LA LNGT
Sbjct: 248 MEEDLHCLVTAD-SEDKIN----HAIKLIDNVIQTAASVPEGQNDLKRNQLRQLATLNGT 302
Query: 263 LREE 266
LR++
Sbjct: 303 LRDD 306
>ZFIN|ZDB-GENE-030131-2492 [details] [associations]
symbol:sf1 "splicing factor 1" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50158 SMART:SM00322
SMART:SM00343 ZFIN:ZDB-GENE-030131-2492 GO:GO:0008270 GO:GO:0003723
GO:GO:0060041 eggNOG:COG5176 HOVERGEN:HBG063318 OrthoDB:EOG4VHK6F
EMBL:BC163938 IPI:IPI00902082 UniGene:Dr.132180 STRING:B3DKQ7
HOGENOM:HOG000170299 ArrayExpress:B3DKQ7 Uniprot:B3DKQ7
Length = 663
Score = 226 (84.6 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 58/136 (42%), Positives = 79/136 (58%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIK 193
P T V +V+ +P D+YP NFVG ++GPRGN+LK +E ++ IRG+GSVK+ K
Sbjct: 204 PATRVSDKVM---IPQDEYPEINFVGLLIGPRGNTLKNIEKECCAKIMIRGKGSVKEG-K 259
Query: 194 EEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKP---VDESLDHYKK 250
+ KD +EPLH LV A E++ AV + N+LK E + +K
Sbjct: 260 VGR-KDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 313
Query: 251 QQLRELAMLNGTLREE 266
QLRELA LNGTLRE+
Sbjct: 314 MQLRELARLNGTLRED 329
>WB|WBGene00019509 [details] [associations]
symbol:K07H8.9 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0040007 GO:GO:0002119 GO:GO:0000003 GO:GO:0003723 HSSP:Q9BW01
eggNOG:COG5176 GeneTree:ENSGT00550000074434 EMBL:FO081300
PIR:T33021 RefSeq:NP_501390.1 ProteinModelPortal:O45180 SMR:O45180
STRING:O45180 EnsemblMetazoa:K07H8.9 GeneID:177620
KEGG:cel:CELE_K07H8.9 UCSC:K07H8.9 CTD:177620 WormBase:K07H8.9
HOGENOM:HOG000016492 InParanoid:O45180 OMA:ISMADIG NextBio:897640
Uniprot:O45180
Length = 254
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 46/119 (38%), Positives = 69/119 (57%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKE-EKLKDKPGYEH 205
+PV+ YP +NF+GRI+GPRG + K++E T CR+ IRG S K K +
Sbjct: 127 IPVETYPTYNFIGRIIGPRGTTAKQLEKDTGCRIMIRGNHSNKMYGNALHKTHGDGSQDA 186
Query: 206 LNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLR 264
++ PL V+VE P +R+ A+ ++ LL P + D K++QL ELA++NGT R
Sbjct: 187 IDLPLRVIVETSGPRREATARITAALETVQVLLVPPPDGRDELKRRQLVELAIMNGTYR 245
>CGD|CAL0004717 [details] [associations]
symbol:orf19.329 species:5476 "Candida albicans" [GO:0000243
"commitment complex" evidence=IEA] [GO:0045131 "pre-mRNA branch
point binding" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084
PROSITE:PS50158 SMART:SM00322 SMART:SM00343 CGD:CAL0004717
GO:GO:0008380 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0005681 GO:GO:0003723 Gene3D:4.10.60.10 EMBL:AACQ01000027
EMBL:AACQ01000026 RefSeq:XP_720024.1 RefSeq:XP_720156.1 HSSP:Q9BW01
ProteinModelPortal:Q5AED9 STRING:Q5AED9 GeneID:3638211
GeneID:3638361 KEGG:cal:CaO19.329 KEGG:cal:CaO19.7961
eggNOG:COG5176 KO:K13095 Uniprot:Q5AED9
Length = 455
Score = 218 (81.8 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 50/127 (39%), Positives = 78/127 (61%)
Query: 140 KRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD 199
+ V RL VPV YP+ NFVG ++GPRGN+LK+++ + R+ IRG+GSVK+ +
Sbjct: 147 RTVERLYVPVKDYPDINFVGFLIGPRGNTLKKLQEDSGARLQIRGKGSVKEGKSSDGFGS 206
Query: 200 KPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLL-KPVDESLDHYKKQQLRELAM 258
+ + LHVL+ A+ P I + + I++ L+ P + ++ K+ QL+ELA+
Sbjct: 207 SQTGTDIQDDLHVLITADSPLKI-SKAVKLVNEIIDKLIFSP--QGMNFMKRDQLKELAV 263
Query: 259 LNGTLRE 265
LNGTLRE
Sbjct: 264 LNGTLRE 270
>UNIPROTKB|K7GNY3 [details] [associations]
symbol:KHDRBS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004088
PROSITE:PS50084 GeneTree:ENSGT00550000074434 EMBL:CU151851
Ensembl:ENSSSCT00000035168 Uniprot:K7GNY3
Length = 242
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 49/108 (45%), Positives = 71/108 (65%)
Query: 157 FVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG---YEHLNEPLHVL 213
FVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ K G Y HLN+ LHVL
Sbjct: 1 FVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELR-KSGEAKYFHLNDDLHVL 59
Query: 214 VEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
+E P +R+ HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 60 IEVFAPPAEAYARMGHALEEIKKFLIP-DYN-DEIRQAQLQELTYLNG 105
>FB|FBgn0034731 [details] [associations]
symbol:CG10384 species:7227 "Drosophila melanogaster"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
SMART:SM00322 EMBL:AE013599 GO:GO:0003723
GeneTree:ENSGT00550000074434 UniGene:Dm.10916 GeneID:37567
KEGG:dme:Dmel_CG10384 FlyBase:FBgn0034731 GenomeRNAi:37567
NextBio:804326 RefSeq:NP_611673.2 ProteinModelPortal:Q9W249
SMR:Q9W249 PRIDE:Q9W249 EnsemblMetazoa:FBtr0300683 UCSC:CG10384-RA
InParanoid:Q9W249 OMA:DYHDDIR PhylomeDB:Q9W249 ArrayExpress:Q9W249
Bgee:Q9W249 Uniprot:Q9W249
Length = 470
Score = 216 (81.1 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 47/126 (37%), Positives = 77/126 (61%)
Query: 139 VKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK 198
VK +++ VPV +P FNFVG++LGP+GNS+KR++ T C++ + GRGS++D KEE+L+
Sbjct: 10 VKVAVKVAVPVRDHPKFNFVGKLLGPKGNSMKRLQEDTMCKMAVLGRGSMRDRRKEEELR 69
Query: 199 DKPG--YEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
Y HL E LHV + ++R+ +A+A + L P + D +++Q+ E+
Sbjct: 70 GSGDSRYAHLFEDLHVEISTFAAPAEAHARIAYALAEVRRFLVP--DYHDDIRQEQMWEM 127
Query: 257 AMLNGT 262
L T
Sbjct: 128 QALTST 133
>FB|FBgn0025571 [details] [associations]
symbol:SF1 "Splicing factor 1" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISS;NAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;ISS;NAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0002121
"inter-male aggressive behavior" evidence=IMP] [GO:0007476
"imaginal disc-derived wing morphogenesis" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001878
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
PROSITE:PS50158 SMART:SM00322 SMART:SM00343 EMBL:AE014297
GO:GO:0022008 GO:GO:0008270 GO:GO:0003723 GO:GO:0002121
Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0007476 GO:GO:0071011
GO:GO:0000398 HSSP:Q9BW01 KO:K13095 GeneTree:ENSGT00550000074434
CTD:7536 ChiTaRS:SF1 OMA:PPLMPWM FlyBase:FBgn0025571 EMBL:BT031265
RefSeq:NP_524654.2 UniGene:Dm.3761 SMR:Q9VEJ1 MINT:MINT-896516
STRING:Q9VEJ1 EnsemblMetazoa:FBtr0083456 GeneID:43912
KEGG:dme:Dmel_CG5836 UCSC:CG5836-RA InParanoid:Q9VEJ1
GenomeRNAi:43912 NextBio:836343 Uniprot:Q9VEJ1
Length = 787
Score = 220 (82.5 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 51/133 (38%), Positives = 80/133 (60%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDS-I 192
P T V +V+ +P +++P+ NFVG ++GPRGN+LK +E T ++ IRG+GSVK+ +
Sbjct: 387 PVTRVSDKVL---IPQEQHPDINFVGLLIGPRGNTLKAMEKDTGAKIIIRGKGSVKEGKV 443
Query: 193 KEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQ 252
+ + PG + EPLH + A PE + +D ++ ++ V E + ++ Q
Sbjct: 444 GRKDGQPLPGED---EPLHAFITAPNPE-AVRKAVDKIKDVIRQGIE-VPEGHNDLRRMQ 498
Query: 253 LRELAMLNGTLRE 265
LRELA LNGTLRE
Sbjct: 499 LRELAQLNGTLRE 511
>ASPGD|ASPL0000074583 [details] [associations]
symbol:AN10615 species:162425 "Emericella nidulans"
[GO:0000349 "generation of catalytic spliceosome for first
transesterification step" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0000243 "commitment
complex" evidence=IEA] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084
PROSITE:PS50158 SMART:SM00322 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 EMBL:BN001303 Gene3D:4.10.60.10
SUPFAM:SSF57756 HOGENOM:HOG000197271 EnsemblFungi:CADANIAT00005496
OMA:PPLMPWM Uniprot:C8V9G4
Length = 554
Score = 210 (79.0 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 48/121 (39%), Positives = 73/121 (60%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHL 206
VPV+ YP NF+G ++GPRGN+LK++E + ++ IRG+GSVK+ + D +
Sbjct: 182 VPVNDYPEINFIGLLIGPRGNTLKKMETESGAKIAIRGKGSVKEG---KGRSDAAHASNQ 238
Query: 207 NEPLHVLVEAEFPEDIINSR-LDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 265
E LH L+ A+ E + ++ L H V +E + E + K+ QLRELA LNGTLR+
Sbjct: 239 EEDLHCLIMADTEEKVNKAKKLVHNV--IETAAS-IPEGQNELKRNQLRELAALNGTLRD 295
Query: 266 E 266
+
Sbjct: 296 D 296
>WB|WBGene00013808 [details] [associations]
symbol:sfa-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0042127 "regulation of
cell proliferation" evidence=IMP] [GO:0040020 "regulation of
meiosis" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084 PROSITE:PS50158
SMART:SM00322 SMART:SM00343 GO:GO:0009792 GO:GO:0002009
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0046872 GO:GO:0008270
GO:GO:0010171 GO:GO:0003723 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0040020
HSSP:Q9BW01 KO:K13095 GeneTree:ENSGT00550000074434 EMBL:AL117204
EMBL:AJ243905 PIR:T31502 RefSeq:NP_503033.1 UniGene:Cel.19529
ProteinModelPortal:G5EF97 SMR:G5EF97 EnsemblMetazoa:Y116A8C.32
GeneID:178486 KEGG:cel:CELE_Y116A8C.32 CTD:178486
WormBase:Y116A8C.32 OMA:ANGARCS NextBio:901328 Uniprot:G5EF97
Length = 699
Score = 209 (78.6 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 46/120 (38%), Positives = 69/120 (57%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHL 206
+P +++P+ NFVG ++GPRGN+LK +EA T ++ IRG+GS+K+ +L PG
Sbjct: 309 IPQEQFPDLNFVGLLIGPRGNTLKSLEAETGAKIIIRGKGSIKEGKLTNRLGPMPGE--- 365
Query: 207 NEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLREE 266
NEPLH V ++I + ++ D + +K QLRELA+LNGT R E
Sbjct: 366 NEPLHAYVTGT-DMNVIKKACEKIKQVIAEATALPDNN--ELRKLQLRELALLNGTFRPE 422
>GENEDB_PFALCIPARUM|PFF1135w [details] [associations]
symbol:PFF1135w "transcription or splicing
factor-like protein, putative" species:5833 "Plasmodium falciparum"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
SMART:SM00343 GO:GO:0008380 GO:GO:0008270 GO:GO:0003723
Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K13095 EMBL:AL844505
RefSeq:XP_966218.1 ProteinModelPortal:C6KT72
EnsemblProtists:PFF1135w:mRNA GeneID:3885872 KEGG:pfa:PFF1135w
EuPathDB:PlasmoDB:PF3D7_0623600 HOGENOM:HOG000281592
ProtClustDB:CLSZ2433258 Uniprot:C6KT72
Length = 615
Score = 207 (77.9 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 46/133 (34%), Positives = 78/133 (58%)
Query: 129 GIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSV 188
G PT +K++ ++++P+DKYP +NF+G I+GPRG + KR+EA + ++ IRG+G+
Sbjct: 145 GFVAPPTYKPIKKIRKIEIPIDKYPEYNFMGLIIGPRGCNHKRLEAESGAQISIRGKGT- 203
Query: 189 KDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHY 248
+KE K D P HV + A+ E + + AV+++ LL P + Y
Sbjct: 204 ---LKEGKKTDHQTEIEAAMPKHVHIAADTEECV-----EKAVSLITPLLDPFHPLHEEY 255
Query: 249 KKQQLRELAMLNG 261
K++ L +LA++NG
Sbjct: 256 KRKGLEQLALVNG 268
>UNIPROTKB|C6KT72 [details] [associations]
symbol:PFF1135w "Transcription or splicing factor-like
protein, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
SMART:SM00343 GO:GO:0008380 GO:GO:0008270 GO:GO:0003723
Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K13095 EMBL:AL844505
RefSeq:XP_966218.1 ProteinModelPortal:C6KT72
EnsemblProtists:PFF1135w:mRNA GeneID:3885872 KEGG:pfa:PFF1135w
EuPathDB:PlasmoDB:PF3D7_0623600 HOGENOM:HOG000281592
ProtClustDB:CLSZ2433258 Uniprot:C6KT72
Length = 615
Score = 207 (77.9 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 46/133 (34%), Positives = 78/133 (58%)
Query: 129 GIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSV 188
G PT +K++ ++++P+DKYP +NF+G I+GPRG + KR+EA + ++ IRG+G+
Sbjct: 145 GFVAPPTYKPIKKIRKIEIPIDKYPEYNFMGLIIGPRGCNHKRLEAESGAQISIRGKGT- 203
Query: 189 KDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHY 248
+KE K D P HV + A+ E + + AV+++ LL P + Y
Sbjct: 204 ---LKEGKKTDHQTEIEAAMPKHVHIAADTEECV-----EKAVSLITPLLDPFHPLHEEY 255
Query: 249 KKQQLRELAMLNG 261
K++ L +LA++NG
Sbjct: 256 KRKGLEQLALVNG 268
>FB|FBgn0022986 [details] [associations]
symbol:qkr58E-1 "quaking related 58E-1" species:7227
"Drosophila melanogaster" [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF13014 SMART:SM00322
GO:GO:0022008 GO:GO:0003723 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:Q9BW01 eggNOG:COG5176 OrthoDB:EOG4SBCDH
EMBL:AF038584 ProteinModelPortal:O44435 SMR:O44435 PaxDb:O44435
PRIDE:O44435 FlyBase:FBgn0022986 InParanoid:O44435
ArrayExpress:O44435 Bgee:O44435 Uniprot:O44435
Length = 396
Score = 203 (76.5 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 40/111 (36%), Positives = 68/111 (61%)
Query: 148 PVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDK--PGYEH 205
P+ +YP FNFVG+ILGP+GN+L++++ T C++ + G S++D KEE+L+ P Y H
Sbjct: 120 PIKEYPKFNFVGKILGPKGNTLRQLQEETMCKMVVMGGNSMRDHGKEEELRSSGNPKYAH 179
Query: 206 LNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
L+ LHV + P R+ +A+ + + P ++ D + +QLRE+
Sbjct: 180 LSRDLHVEISTVAPPAEAYHRISYALGEIRKFMIP--DANDDIRLEQLREM 228
>UNIPROTKB|H0YAQ3 [details] [associations]
symbol:KHDRBS3 "KH domain-containing, RNA-binding, signal
transduction-associated protein 3" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] GO:GO:0005634 HGNC:HGNC:18117 EMBL:AC040914
EMBL:AC104371 Ensembl:ENST00000517859 Uniprot:H0YAQ3
Length = 196
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 46/103 (44%), Positives = 66/103 (64%)
Query: 162 LGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG---YEHLNEPLHVLVEAEF 218
LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ K G Y HLN+ LHVL+E
Sbjct: 2 LGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELR-KSGEAKYFHLNDDLHVLIEVFA 60
Query: 219 PEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
P +R+ HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 61 PPAEAYARMGHALEEIKKFLIP-DYN-DEIRQAQLQELTYLNG 101
>WB|WBGene00013325 [details] [associations]
symbol:Y57G11C.36 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
EMBL:Z99281 GO:GO:0003723 eggNOG:COG5176
GeneTree:ENSGT00550000074434 RefSeq:NP_872088.1
ProteinModelPortal:Q8I4C4 SMR:Q8I4C4 EnsemblMetazoa:Y57G11C.36.1
EnsemblMetazoa:Y57G11C.36.2 EnsemblMetazoa:Y57G11C.36.3
GeneID:259844 KEGG:cel:CELE_Y57G11C.36 UCSC:Y57G11C.36.1 CTD:259844
WormBase:Y57G11C.36 HOGENOM:HOG000022069 InParanoid:Q8I4C4
OMA:HMYELMN NextBio:952632 Uniprot:Q8I4C4
Length = 380
Score = 173 (66.0 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 45/118 (38%), Positives = 66/118 (55%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHL 206
VPV+K+P++NFVGR+LGPRG + K++E T CR+ I GR S + P L
Sbjct: 118 VPVEKFPDYNFVGRLLGPRGTTAKQLEVTTGCRITILGRTKRDGSSSNPDVTTGP----L 173
Query: 207 NEPLHVLVEAEFPE--DIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGT 262
+ + V A+ P+ ++ + H AIL+ P D + D K+QQL LA +NGT
Sbjct: 174 R--VQISVPADMPQAAKLLKGGVGHIQAILD---VPTDGN-DELKRQQLLILANMNGT 225
>UNIPROTKB|H0YAQ1 [details] [associations]
symbol:KHDRBS3 "KH domain-containing, RNA-binding, signal
transduction-associated protein 3" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] GO:GO:0005634 HGNC:HGNC:18117 EMBL:AC040914
EMBL:AC104371 Ensembl:ENST00000524282 Uniprot:H0YAQ1
Length = 195
Score = 139 (54.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 36/89 (40%), Positives = 54/89 (60%)
Query: 176 TECRVFIRGRGSVKDSIKEEKLKDKPG---YEHLNEPLHVLVEAEFPEDIINSRLDHAVA 232
T ++ I G+GS++D KEE+L+ K G Y HLN+ LHVL+E P +R+ HA+
Sbjct: 6 TLTKMSILGKGSMRDKAKEEELR-KSGEAKYFHLNDDLHVLIEVFAPPAEAYARMGHALE 64
Query: 233 ILENLLKPVDESLDHYKKQQLRELAMLNG 261
++ L P D + D ++ QL+EL LNG
Sbjct: 65 EIKKFLIP-DYN-DEIRQAQLQELTYLNG 91
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.138 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 293 279 0.00081 115 3 11 22 0.38 34
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 97
No. of states in DFA: 597 (63 KB)
Total size of DFA: 190 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.44u 0.09s 24.53t Elapsed: 00:00:01
Total cpu time: 24.45u 0.09s 24.54t Elapsed: 00:00:01
Start: Fri May 10 15:05:50 2013 End: Fri May 10 15:05:51 2013