Query 022733
Match_columns 293
No_of_seqs 299 out of 2163
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 05:44:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022733.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022733hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 3.6E-41 7.8E-46 315.0 11.0 207 38-246 1-268 (371)
2 PTZ00037 DnaJ_C chaperone prot 100.0 5.2E-35 1.1E-39 281.7 9.0 209 34-246 21-278 (421)
3 PRK14296 chaperone protein Dna 100.0 9.4E-35 2E-39 276.7 10.5 208 39-246 2-278 (372)
4 PRK14298 chaperone protein Dna 100.0 6.9E-34 1.5E-38 271.3 9.4 207 40-246 4-269 (377)
5 PRK14282 chaperone protein Dna 100.0 2.8E-33 6.1E-38 266.6 10.8 208 39-246 2-280 (369)
6 PRK14288 chaperone protein Dna 100.0 2E-33 4.3E-38 267.5 8.7 203 40-246 2-262 (369)
7 PRK14287 chaperone protein Dna 100.0 7.5E-33 1.6E-37 263.7 10.1 207 40-246 3-266 (371)
8 PRK14276 chaperone protein Dna 100.0 1.2E-32 2.6E-37 263.2 10.1 207 40-246 3-274 (380)
9 PRK14280 chaperone protein Dna 100.0 1.1E-32 2.5E-37 263.0 8.9 207 40-246 3-271 (376)
10 PRK14278 chaperone protein Dna 100.0 2.6E-32 5.7E-37 260.6 11.2 206 41-246 3-267 (378)
11 PRK14297 chaperone protein Dna 100.0 3.6E-32 7.9E-37 259.9 10.0 207 40-246 3-276 (380)
12 KOG0712 Molecular chaperone (D 100.0 5.7E-32 1.2E-36 250.1 10.6 205 39-246 2-256 (337)
13 PRK14279 chaperone protein Dna 100.0 6.9E-32 1.5E-36 258.7 10.9 204 39-246 7-297 (392)
14 PRK14291 chaperone protein Dna 100.0 1.3E-31 2.8E-36 256.2 11.0 203 40-246 2-279 (382)
15 PRK14286 chaperone protein Dna 100.0 6.8E-32 1.5E-36 257.2 8.9 204 39-246 2-274 (372)
16 PRK14277 chaperone protein Dna 100.0 1.3E-31 2.9E-36 256.4 10.5 207 40-246 4-283 (386)
17 PRK14285 chaperone protein Dna 100.0 9.8E-32 2.1E-36 255.5 8.8 202 41-246 3-270 (365)
18 PRK14294 chaperone protein Dna 100.0 2.3E-31 4.9E-36 253.3 10.5 204 39-246 2-268 (366)
19 PRK14284 chaperone protein Dna 100.0 2.9E-31 6.2E-36 254.5 10.9 202 41-246 1-282 (391)
20 TIGR02349 DnaJ_bact chaperone 100.0 3.6E-31 7.8E-36 251.0 10.4 205 42-246 1-271 (354)
21 PRK14283 chaperone protein Dna 100.0 4.2E-31 9E-36 252.4 10.8 208 39-246 3-274 (378)
22 PRK14301 chaperone protein Dna 100.0 5.1E-31 1.1E-35 251.3 11.0 203 40-246 3-268 (373)
23 PRK14290 chaperone protein Dna 100.0 3.7E-31 8.1E-36 251.7 9.1 206 41-246 3-274 (365)
24 PRK10767 chaperone protein Dna 100.0 4.8E-31 1E-35 251.5 9.1 204 39-246 2-266 (371)
25 PRK14281 chaperone protein Dna 100.0 9.7E-31 2.1E-35 251.2 10.5 206 41-246 3-290 (397)
26 PRK14289 chaperone protein Dna 100.0 2.9E-30 6.2E-35 247.4 11.6 208 39-246 3-282 (386)
27 PRK14295 chaperone protein Dna 100.0 2.7E-30 5.9E-35 247.5 10.4 203 40-246 8-290 (389)
28 PRK14292 chaperone protein Dna 100.0 7E-30 1.5E-34 243.6 11.4 207 40-246 1-266 (371)
29 PRK14293 chaperone protein Dna 100.0 9.8E-30 2.1E-34 242.7 10.6 206 41-246 3-271 (374)
30 PRK14300 chaperone protein Dna 100.0 8.1E-30 1.8E-34 243.1 9.3 202 41-246 3-269 (372)
31 KOG0713 Molecular chaperone (D 99.9 1.8E-26 4E-31 211.4 7.9 203 37-246 12-255 (336)
32 KOG0715 Molecular chaperone (D 99.9 2.4E-24 5.3E-29 198.3 7.4 206 35-245 37-279 (288)
33 PRK14299 chaperone protein Dna 99.9 2.4E-23 5.2E-28 192.6 5.8 193 40-246 3-205 (291)
34 PRK10266 curved DNA-binding pr 99.9 1.1E-22 2.4E-27 189.4 6.3 67 40-106 3-70 (306)
35 KOG0716 Molecular chaperone (D 99.7 1.7E-18 3.7E-23 154.6 5.3 72 37-108 27-100 (279)
36 PF00226 DnaJ: DnaJ domain; I 99.7 1.3E-17 2.9E-22 119.8 4.0 61 42-102 1-64 (64)
37 KOG0717 Molecular chaperone (D 99.7 1.1E-17 2.4E-22 158.4 4.3 73 37-109 4-79 (508)
38 KOG0691 Molecular chaperone (D 99.6 7.7E-17 1.7E-21 148.1 4.5 69 40-108 4-74 (296)
39 KOG0718 Molecular chaperone (D 99.6 1.5E-16 3.2E-21 150.9 4.9 71 38-108 6-81 (546)
40 PTZ00341 Ring-infected erythro 99.6 3.2E-16 7E-21 160.0 6.6 71 38-108 570-641 (1136)
41 smart00271 DnaJ DnaJ molecular 99.6 1.1E-15 2.5E-20 108.1 6.2 57 41-97 1-60 (60)
42 KOG0719 Molecular chaperone (D 99.6 3.8E-16 8.3E-21 136.6 4.2 71 38-108 11-85 (264)
43 PHA03102 Small T antigen; Revi 99.6 4.6E-16 1E-20 130.2 3.3 66 41-108 5-72 (153)
44 cd06257 DnaJ DnaJ domain or J- 99.6 1.9E-15 4E-20 105.0 5.6 53 42-94 1-55 (55)
45 KOG0721 Molecular chaperone (D 99.6 2.1E-15 4.5E-20 130.9 5.7 74 36-109 94-169 (230)
46 COG2214 CbpA DnaJ-class molecu 99.5 1.5E-14 3.2E-19 126.0 5.3 68 38-105 3-73 (237)
47 TIGR03835 termin_org_DnaJ term 99.5 2.4E-14 5.1E-19 143.6 5.4 66 41-106 2-68 (871)
48 KOG0624 dsRNA-activated protei 99.5 3.5E-14 7.6E-19 131.2 5.5 71 37-107 390-465 (504)
49 PRK05014 hscB co-chaperone Hsc 99.4 1.4E-13 3E-18 118.0 5.8 65 41-105 1-74 (171)
50 PRK01356 hscB co-chaperone Hsc 99.4 1.3E-13 2.9E-18 117.5 4.8 65 41-105 2-73 (166)
51 PTZ00100 DnaJ chaperone protei 99.4 3.1E-13 6.8E-18 107.8 5.6 59 33-93 57-115 (116)
52 PRK00294 hscB co-chaperone Hsc 99.4 6.8E-13 1.5E-17 113.8 6.1 69 38-106 1-78 (173)
53 PRK03578 hscB co-chaperone Hsc 99.4 8.2E-13 1.8E-17 113.7 6.2 66 40-105 5-79 (176)
54 KOG0720 Molecular chaperone (D 99.3 8.3E-13 1.8E-17 125.6 4.1 70 38-107 232-302 (490)
55 KOG0722 Molecular chaperone (D 99.3 1.8E-12 3.8E-17 115.1 2.2 67 42-108 34-101 (329)
56 KOG1150 Predicted molecular ch 99.2 5.3E-12 1.2E-16 108.3 4.4 81 4-100 32-115 (250)
57 KOG0714 Molecular chaperone (D 99.2 4.5E-12 9.8E-17 115.4 3.7 67 40-106 2-71 (306)
58 KOG0550 Molecular chaperone (D 99.2 5.5E-12 1.2E-16 119.0 3.8 71 36-106 368-441 (486)
59 PRK09430 djlA Dna-J like membr 99.2 1.3E-11 2.9E-16 112.9 5.8 58 37-94 196-262 (267)
60 PHA02624 large T antigen; Prov 99.2 1.8E-11 3.8E-16 121.7 4.5 60 40-101 10-71 (647)
61 PRK01773 hscB co-chaperone Hsc 99.1 1.6E-10 3.4E-15 99.2 5.4 67 40-106 1-76 (173)
62 COG5407 SEC63 Preprotein trans 99.0 9.8E-11 2.1E-15 111.2 3.2 71 39-109 96-173 (610)
63 TIGR00714 hscB Fe-S protein as 98.9 2E-09 4.4E-14 91.1 5.0 54 53-106 3-63 (157)
64 COG5269 ZUO1 Ribosome-associat 98.6 2.2E-08 4.7E-13 90.0 2.7 75 31-105 33-114 (379)
65 KOG0723 Molecular chaperone (D 98.5 1.8E-07 4E-12 72.7 5.1 67 27-95 42-108 (112)
66 KOG0568 Molecular chaperone (D 98.3 2.6E-07 5.6E-12 81.5 2.7 57 38-94 44-102 (342)
67 KOG1789 Endocytosis protein RM 98.2 1.3E-06 2.7E-11 90.6 5.5 59 35-94 1275-1337(2235)
68 PF13370 Fer4_13: 4Fe-4S singl 98.1 2.5E-07 5.4E-12 65.2 -1.9 56 136-191 1-58 (58)
69 PF13459 Fer4_15: 4Fe-4S singl 98.1 9.9E-07 2.1E-11 63.5 1.1 57 134-191 1-65 (65)
70 COG1141 Fer Ferredoxin [Energy 98.0 1.5E-06 3.2E-11 63.1 0.5 58 134-192 3-67 (68)
71 KOG3192 Mitochondrial J-type c 97.2 0.00027 5.8E-09 59.0 2.9 68 38-105 5-81 (168)
72 KOG0431 Auxilin-like protein a 96.4 0.0055 1.2E-07 60.3 6.0 44 49-92 396-448 (453)
73 COG1076 DjlA DnaJ-domain-conta 96.2 0.0021 4.5E-08 55.3 1.7 52 41-92 113-173 (174)
74 PF00684 DnaJ_CXXCXGXG: DnaJ c 95.3 0.023 5E-07 40.9 3.7 39 149-187 12-50 (66)
75 PRK14300 chaperone protein Dna 95.2 0.047 1E-06 52.5 6.4 34 198-231 292-332 (372)
76 COG1076 DjlA DnaJ-domain-conta 95.1 0.0093 2E-07 51.2 1.4 64 42-105 2-74 (174)
77 PRK14295 chaperone protein Dna 94.9 0.068 1.5E-06 51.7 6.7 34 197-230 312-351 (389)
78 PRK14285 chaperone protein Dna 94.9 0.068 1.5E-06 51.3 6.6 32 198-229 293-331 (365)
79 PRK14291 chaperone protein Dna 94.9 0.067 1.5E-06 51.6 6.6 36 196-231 300-342 (382)
80 PF03656 Pam16: Pam16; InterP 94.8 0.051 1.1E-06 44.3 4.8 57 37-95 54-110 (127)
81 PRK14282 chaperone protein Dna 94.8 0.08 1.7E-06 50.8 6.8 35 196-230 301-342 (369)
82 PRK14284 chaperone protein Dna 94.8 0.06 1.3E-06 52.1 6.0 33 198-230 306-345 (391)
83 PRK14278 chaperone protein Dna 94.7 0.076 1.6E-06 51.2 6.4 33 198-230 290-329 (378)
84 PRK14301 chaperone protein Dna 94.3 0.092 2E-06 50.5 5.9 32 200-231 292-330 (373)
85 PRK14290 chaperone protein Dna 94.2 0.11 2.4E-06 49.7 6.5 33 198-230 296-335 (365)
86 COG0484 DnaJ DnaJ-class molecu 94.2 0.11 2.3E-06 49.8 6.2 32 200-231 292-330 (371)
87 TIGR03835 termin_org_DnaJ term 94.2 0.0094 2E-07 61.4 -1.0 55 192-246 691-750 (871)
88 PRK14286 chaperone protein Dna 94.1 0.12 2.6E-06 49.7 6.5 33 197-229 296-335 (372)
89 PRK14281 chaperone protein Dna 94.1 0.11 2.3E-06 50.5 6.1 32 200-231 314-352 (397)
90 PRK14298 chaperone protein Dna 94.0 0.11 2.5E-06 49.9 6.0 31 200-230 293-330 (377)
91 PRK14279 chaperone protein Dna 93.8 0.15 3.2E-06 49.4 6.4 32 199-230 320-357 (392)
92 PRK14294 chaperone protein Dna 93.6 0.17 3.6E-06 48.6 6.3 32 200-231 292-330 (366)
93 PRK14297 chaperone protein Dna 93.6 0.15 3.2E-06 49.2 5.9 33 199-231 299-338 (380)
94 PRK14288 chaperone protein Dna 93.5 0.2 4.2E-06 48.2 6.7 33 198-230 285-324 (369)
95 PRK14280 chaperone protein Dna 93.5 0.18 3.9E-06 48.6 6.3 31 199-229 294-331 (376)
96 PRK14277 chaperone protein Dna 93.3 0.2 4.4E-06 48.4 6.4 32 200-231 307-345 (386)
97 PRK10767 chaperone protein Dna 93.2 0.2 4.3E-06 48.2 6.2 33 199-231 289-328 (371)
98 PRK14289 chaperone protein Dna 93.2 0.17 3.7E-06 48.9 5.7 33 199-231 305-344 (386)
99 PRK14276 chaperone protein Dna 93.1 0.21 4.5E-06 48.2 6.1 33 199-231 297-336 (380)
100 TIGR02349 DnaJ_bact chaperone 93.0 0.24 5.2E-06 47.2 6.4 33 199-231 294-333 (354)
101 PRK14287 chaperone protein Dna 92.4 0.28 6E-06 47.2 5.9 32 199-230 289-327 (371)
102 PRK14283 chaperone protein Dna 92.3 0.34 7.4E-06 46.7 6.5 33 199-231 297-336 (378)
103 PRK14296 chaperone protein Dna 92.2 0.33 7.2E-06 46.7 6.3 32 200-231 302-341 (372)
104 PLN03165 chaperone protein dna 92.1 0.18 3.9E-06 40.2 3.6 44 140-186 40-83 (111)
105 PF06902 Fer4_19: Divergent 4F 91.2 0.062 1.3E-06 38.6 0.0 55 133-191 7-61 (64)
106 PTZ00037 DnaJ_C chaperone prot 91.2 0.52 1.1E-05 46.1 6.4 33 198-230 301-343 (421)
107 PRK14293 chaperone protein Dna 90.5 0.63 1.4E-05 44.8 6.2 31 200-230 295-333 (374)
108 PF12797 Fer4_2: 4Fe-4S bindin 90.1 0.089 1.9E-06 29.6 -0.0 19 134-152 3-21 (22)
109 PRK14292 chaperone protein Dna 89.5 0.89 1.9E-05 43.7 6.3 32 200-231 290-328 (371)
110 TIGR02642 phage_xxxx uncharact 89.5 0.33 7.2E-06 42.2 3.0 52 153-219 100-151 (186)
111 PF11833 DUF3353: Protein of u 85.7 1.7 3.6E-05 38.1 5.2 39 50-94 1-39 (194)
112 PF13446 RPT: A repeated domai 84.8 1.6 3.4E-05 30.7 3.9 45 41-94 5-49 (62)
113 COG0437 HybA Fe-S-cluster-cont 82.4 0.39 8.5E-06 42.3 -0.1 57 134-200 95-164 (203)
114 KOG3256 NADH:ubiquinone oxidor 80.2 0.93 2E-05 38.6 1.4 69 125-193 97-171 (212)
115 KOG0724 Zuotin and related mol 79.5 2.1 4.5E-05 40.3 3.7 52 53-104 4-61 (335)
116 PF12837 Fer4_6: 4Fe-4S bindin 78.5 0.39 8.5E-06 27.5 -1.0 20 134-153 2-21 (24)
117 PF14687 DUF4460: Domain of un 71.8 9.3 0.0002 30.4 5.0 45 52-96 5-55 (112)
118 PRK14028 pyruvate ferredoxin o 71.1 20 0.00044 33.4 8.0 23 132-154 240-262 (312)
119 COG3383 Uncharacterized anaero 66.8 5.1 0.00011 41.9 3.1 31 176-206 263-293 (978)
120 PF01556 CTDII: DnaJ C termina 65.5 9.3 0.0002 28.2 3.6 36 196-231 25-68 (81)
121 PF13237 Fer4_10: 4Fe-4S diclu 62.9 6.2 0.00013 26.2 2.0 20 134-153 2-21 (52)
122 COG2878 Predicted NADH:ubiquin 62.2 1.7 3.8E-05 37.6 -1.0 63 131-196 107-169 (198)
123 PF00037 Fer4: 4Fe-4S binding 59.7 2 4.3E-05 24.4 -0.8 19 135-153 2-20 (24)
124 PRK13029 2-oxoacid ferredoxin 59.6 7.1 0.00015 43.0 2.8 37 132-168 650-688 (1186)
125 PRK09193 indolepyruvate ferred 56.9 8.5 0.00018 42.4 2.8 36 133-168 637-674 (1165)
126 PRK09626 oorD 2-oxoglutarate-a 56.8 9.5 0.0002 29.5 2.4 21 133-153 10-30 (103)
127 COG1144 Pyruvate:ferredoxin ox 55.8 10 0.00023 29.0 2.3 64 130-195 26-89 (91)
128 PF04879 Molybdop_Fe4S4: Molyb 55.5 19 0.00041 24.3 3.5 33 176-208 3-35 (55)
129 PF12800 Fer4_4: 4Fe-4S bindin 55.0 9.5 0.00021 19.8 1.4 15 139-153 2-16 (17)
130 PRK13030 2-oxoacid ferredoxin 53.6 10 0.00022 41.9 2.7 36 133-168 623-660 (1159)
131 PRK09625 porD pyruvate flavodo 53.0 3.7 8.1E-05 33.6 -0.5 24 132-155 52-75 (133)
132 PRK14299 chaperone protein Dna 52.7 15 0.00033 34.0 3.5 32 199-230 228-265 (291)
133 PRK10266 curved DNA-binding pr 51.5 17 0.00036 34.0 3.5 31 199-229 236-271 (306)
134 COG1146 Ferredoxin [Energy pro 51.4 20 0.00044 25.3 3.2 20 135-154 4-23 (68)
135 COG1142 HycB Fe-S-cluster-cont 50.4 13 0.00028 31.8 2.3 20 133-152 76-95 (165)
136 TIGR01582 FDH-beta formate deh 49.7 4.9 0.00011 37.3 -0.3 63 134-196 119-184 (283)
137 TIGR02060 aprB adenosine phosp 48.5 19 0.00041 29.5 3.0 61 134-196 3-69 (132)
138 COG3592 Uncharacterized conser 47.9 3.7 8.1E-05 29.7 -1.1 55 133-191 17-71 (74)
139 PRK09623 vorD 2-ketoisovalerat 47.0 19 0.00042 28.0 2.8 21 133-153 45-65 (105)
140 COG5552 Uncharacterized conser 46.7 53 0.0012 24.3 4.7 30 41-70 3-32 (88)
141 PRK09624 porD pyuvate ferredox 45.0 20 0.00043 28.0 2.5 20 135-154 47-66 (105)
142 COG0437 HybA Fe-S-cluster-cont 43.8 16 0.00035 32.2 2.0 24 131-154 10-33 (203)
143 PRK08348 NADH-plastoquinone ox 43.7 16 0.00034 29.0 1.8 21 133-153 36-56 (120)
144 PRK09129 NADH dehydrogenase su 42.8 18 0.00039 38.1 2.6 33 175-207 216-248 (776)
145 PF13187 Fer4_9: 4Fe-4S diclus 42.3 9.6 0.00021 25.5 0.3 15 140-154 1-15 (55)
146 PRK00783 DNA-directed RNA poly 42.3 19 0.0004 32.8 2.3 91 133-240 164-256 (263)
147 PRK05113 electron transport co 42.2 14 0.00031 32.1 1.4 21 133-153 108-128 (191)
148 PRK13409 putative ATPase RIL; 41.8 13 0.00028 38.0 1.3 20 133-152 43-62 (590)
149 PRK06991 ferredoxin; Provision 41.1 12 0.00027 34.4 0.9 20 134-153 80-99 (270)
150 TIGR03048 PS_I_psaC photosyste 41.1 13 0.00028 27.2 0.8 20 134-153 3-22 (80)
151 TIGR03149 cyt_nit_nrfC cytochr 41.1 9.9 0.00021 33.9 0.3 25 133-157 40-64 (225)
152 PF14697 Fer4_21: 4Fe-4S diclu 40.8 20 0.00043 24.9 1.7 18 135-152 35-52 (59)
153 COG4231 Indolepyruvate ferredo 40.7 18 0.00039 37.1 2.1 27 132-158 570-598 (640)
154 CHL00065 psaC photosystem I su 38.8 12 0.00026 27.4 0.4 18 136-153 6-23 (81)
155 TIGR00403 ndhI NADH-plastoquin 37.8 23 0.0005 30.5 2.1 22 133-154 56-77 (183)
156 TIGR03224 benzo_boxA benzoyl-C 37.0 20 0.00044 34.9 1.7 22 133-154 4-25 (411)
157 PRK02651 photosystem I subunit 37.0 22 0.00048 25.8 1.6 16 138-153 8-23 (81)
158 PRK08318 dihydropyrimidine deh 36.6 29 0.00063 33.7 2.8 19 135-153 338-356 (420)
159 PLN00071 photosystem I subunit 36.6 18 0.00039 26.4 1.1 18 136-153 6-23 (81)
160 PF10041 DUF2277: Uncharacteri 36.3 1.7E+02 0.0036 21.8 6.0 54 41-94 3-61 (78)
161 KOG3442 Uncharacterized conser 35.2 49 0.0011 26.9 3.4 39 38-76 56-94 (132)
162 PF07709 SRR: Seven Residue Re 34.5 30 0.00066 16.9 1.3 13 81-93 2-14 (14)
163 COG1245 Predicted ATPase, RNas 34.4 14 0.00031 36.8 0.2 18 135-152 46-63 (591)
164 TIGR03478 DMSO_red_II_bet DMSO 33.7 12 0.00025 35.4 -0.5 48 134-196 157-222 (321)
165 PRK09477 napH quinol dehydroge 32.5 45 0.00098 30.5 3.2 19 136-154 205-223 (271)
166 PTZ00305 NADH:ubiquinone oxido 32.5 71 0.0015 29.9 4.4 62 134-196 207-277 (297)
167 PRK10882 hydrogenase 2 protein 32.2 20 0.00043 34.0 0.8 20 134-153 138-157 (328)
168 TIGR02179 PorD_KorD 2-oxoacid: 31.6 40 0.00087 24.2 2.2 21 134-154 20-40 (78)
169 PRK05888 NADH dehydrogenase su 31.4 35 0.00076 28.6 2.1 17 138-154 57-73 (164)
170 PRK15449 ferredoxin-like prote 31.4 19 0.00042 27.8 0.5 21 132-152 54-74 (95)
171 PF12434 Malate_DH: Malate deh 30.6 56 0.0012 19.3 2.2 17 55-71 10-26 (28)
172 PRK08493 NADH dehydrogenase su 30.4 30 0.00066 36.9 1.9 55 138-196 203-257 (819)
173 TIGR02951 DMSO_dmsB DMSO reduc 30.2 23 0.0005 29.6 0.8 21 133-153 3-23 (161)
174 COG1148 HdrA Heterodisulfide r 30.2 35 0.00075 34.4 2.1 32 135-167 221-254 (622)
175 TIGR01971 NuoI NADH-quinone ox 28.9 40 0.00088 26.5 2.0 15 139-153 43-57 (122)
176 COG2879 Uncharacterized small 28.8 93 0.002 22.2 3.5 26 61-86 27-52 (65)
177 PRK07569 bidirectional hydroge 28.8 29 0.00062 31.0 1.2 22 132-153 139-160 (234)
178 PRK13984 putative oxidoreducta 28.8 26 0.00056 35.7 1.0 20 134-153 40-59 (604)
179 TIGR02163 napH_ ferredoxin-typ 26.3 35 0.00076 30.9 1.3 18 137-154 199-216 (255)
180 TIGR01944 rnfB electron transp 26.2 35 0.00075 28.8 1.2 21 133-153 107-127 (165)
181 TIGR01973 NuoG NADH-quinone ox 25.7 34 0.00073 35.0 1.2 64 129-192 132-202 (603)
182 COG1107 Archaea-specific RecJ- 25.3 40 0.00088 34.4 1.6 46 141-186 53-103 (715)
183 TIGR00402 napF ferredoxin-type 25.1 1E+02 0.0022 23.5 3.6 18 136-153 31-48 (101)
184 PRK07860 NADH dehydrogenase su 24.9 74 0.0016 33.8 3.6 28 175-202 222-249 (797)
185 TIGR02642 phage_xxxx uncharact 23.9 57 0.0012 28.4 2.1 27 141-167 99-130 (186)
186 COG1149 MinD superfamily P-loo 23.4 1.3E+02 0.0029 27.9 4.5 20 133-152 63-82 (284)
187 PHA03051 Hypothetical protein; 22.3 31 0.00068 25.1 0.2 26 4-29 17-42 (88)
188 TIGR02700 flavo_MJ0208 archaeo 22.2 47 0.001 29.7 1.3 20 134-153 143-162 (234)
189 PF04246 RseC_MucC: Positive r 21.8 80 0.0017 25.5 2.5 40 178-217 16-61 (135)
190 PRK08166 NADH dehydrogenase su 21.7 1.3E+02 0.0027 32.3 4.6 118 56-192 85-209 (847)
191 COG1107 Archaea-specific RecJ- 21.0 55 0.0012 33.5 1.6 11 154-164 20-30 (715)
192 PRK07860 NADH dehydrogenase su 20.4 44 0.00095 35.5 0.8 59 133-192 144-210 (797)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.6e-41 Score=315.03 Aligned_cols=207 Identities=24% Similarity=0.290 Sum_probs=162.7
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-C-chHHHHHHHHHHHHhhcccccccccccccccccc--ccc
Q 022733 38 SKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAG-Q-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF--HFG 113 (293)
Q Consensus 38 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~-~-~~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~--~~~ 113 (293)
+..+|||+||||+++||.+|||+|||+||++||||+|+ + +++++|++|++||+||+||++|+.||+++..... +++
T Consensus 1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~g 80 (371)
T COG0484 1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFG 80 (371)
T ss_pred CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcC
Confidence 45789999999999999999999999999999999998 3 4788999999999999999999999999854421 222
Q ss_pred cc---------------cCCCCCC--CCCCCCCCCCccccc-----------------cccCcCCCCCccc------ccc
Q 022733 114 TN---------------ASAGFSR--SSWKGPPRPEALFVD-----------------ENACIGCRECVHH------ASN 153 (293)
Q Consensus 114 ~~---------------~~~~~~~--~~~~gp~r~~difvd-----------------~~~CigC~~C~~~------ap~ 153 (293)
.. +|+|.++ ..-..+.++.|+..+ ..+-..|..|.++ .|.
T Consensus 81 g~g~~~fgg~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak~gt~~~ 160 (371)
T COG0484 81 GFGFGGFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPK 160 (371)
T ss_pred CCCcCCCCCCHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCCCCCCCC
Confidence 11 1111111 111235566666543 2234556666655 788
Q ss_pred eeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCC-----
Q 022733 154 TFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGG----- 218 (293)
Q Consensus 154 tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G----- 218 (293)
+|..|+|.|..+..++. +..+++++|+.|.| .|.|.+.+.+.+.|+|.||+|+.+|++|+..|
T Consensus 161 tC~tC~G~G~v~~~~~~--g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~ir~~g~G~~g 238 (371)
T COG0484 161 TCPTCNGSGQVRTVQRT--GFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSGEGEAG 238 (371)
T ss_pred cCCCCCCcCeEEEEEee--eEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCCccCCEEEEecCcccC
Confidence 99999999999888877 77788999999998 79999999999999999999999999996444
Q ss_pred --CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 219 --WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 219 --~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
++.+||+||...+.....+++..+||+-
T Consensus 239 ~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~ 268 (371)
T COG0484 239 PNGGPAGDLYVFVHVKPHPIFERDGDDLYC 268 (371)
T ss_pred CCCCCCccEEEEEEeecCCCeEECCCceEe
Confidence 3557999999977777667777777765
No 2
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=100.00 E-value=5.2e-35 Score=281.67 Aligned_cols=209 Identities=25% Similarity=0.249 Sum_probs=158.0
Q ss_pred CCCCCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHhhccccccccccccccccccc-c
Q 022733 34 GERASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFH-F 112 (293)
Q Consensus 34 ~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~-~ 112 (293)
.++.+...|||+||||+++||.+|||+|||+||++||||++++ .++|++|++||++|+||.+|+.||.++.....+ .
T Consensus 21 ~~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~--~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~~ 98 (421)
T PTZ00037 21 RKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD--PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGE 98 (421)
T ss_pred ccccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch--HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccCC
Confidence 3555667899999999999999999999999999999999864 589999999999999999999999987532110 0
Q ss_pred c--------cccCCCCCCCCCCCCCCCCccccc-----------------cccCcCCCCCccc-----ccceeeeeCCcc
Q 022733 113 G--------TNASAGFSRSSWKGPPRPEALFVD-----------------ENACIGCRECVHH-----ASNTFVMDEATG 162 (293)
Q Consensus 113 ~--------~~~~~~~~~~~~~gp~r~~difvd-----------------~~~CigC~~C~~~-----ap~tf~~c~g~G 162 (293)
+ ..+|++.+ ...++.++.|+.+. ...-+.|..|.++ .+.+|..|.|.|
T Consensus 99 ~~~d~~d~f~~~Fggg~--~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G 176 (421)
T PTZ00037 99 QPADASDLFDLIFGGGR--KPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDCKLCNGQG 176 (421)
T ss_pred CCcchhhhHHHhhcccc--ccccccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCCCCccCCCCCCCC
Confidence 0 01122111 01223445555432 2234556666554 356899999999
Q ss_pred eEEEEEecCcccceecccccCCCc------------ceeeeeeecccceEEEEeCCCCCCCcEEecCC------CCCCCc
Q 022733 163 CARVKVQYGDSDQNIEVSVDSCPV------------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGG------WERPAN 224 (293)
Q Consensus 163 ~~~v~~q~g~~~~~iq~ac~~Cpg------------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G------~~~~~~ 224 (293)
....+++.+++.++++..|+.|.| .|.|.+++.+.+.|+|.||||+++|++|...| ++.|||
T Consensus 177 ~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~~~~~pGD 256 (421)
T PTZ00037 177 IRVQIRQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADEKPNEIPGN 256 (421)
T ss_pred eEEEEEeecceeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEEecccCCCCCCCCCc
Confidence 988888888888889999999977 58888999999999999999999999996444 356889
Q ss_pred eehhhHHHHHHHHHHhhCCCCC
Q 022733 225 VFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 225 vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
|++.........++++..||+-
T Consensus 257 Liv~I~~~ph~~F~R~G~DL~~ 278 (421)
T PTZ00037 257 VVFILNEKPHDTFKREGGDLFI 278 (421)
T ss_pred EEEEEEecCCCCcEEeCCeEEE
Confidence 9988855554455556667765
No 3
>PRK14296 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9.4e-35 Score=276.74 Aligned_cols=208 Identities=25% Similarity=0.312 Sum_probs=154.8
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhcccccccccccccccccc---c---
Q 022733 39 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF---H--- 111 (293)
Q Consensus 39 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~---~--- 111 (293)
+..|||+||||+++||.+|||+|||+||++||||+++++ ++++|++|++||+||+||++|+.||+++..... +
T Consensus 2 ~~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~~~~ 81 (372)
T PRK14296 2 KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSS 81 (372)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCCcCc
Confidence 357999999999999999999999999999999999754 678999999999999999999999998743110 1
Q ss_pred -ccc--c--------cCCCC--CCCCC--------CCCCCCCccccc-----------------cccCcCCCCCccc---
Q 022733 112 -FGT--N--------ASAGF--SRSSW--------KGPPRPEALFVD-----------------ENACIGCRECVHH--- 150 (293)
Q Consensus 112 -~~~--~--------~~~~~--~~~~~--------~gp~r~~difvd-----------------~~~CigC~~C~~~--- 150 (293)
++. . .++++ -|+.+ ..+.++.|+.+. ..+.+.|..|.++
T Consensus 82 ~~~~~~~~~~~~~~~g~~~f~d~f~~~fggg~~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~G~~ 161 (372)
T PRK14296 82 NFGDFEDLFSNMGSSGFSSFTNIFSDFFGSNKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAE 161 (372)
T ss_pred CCCccccccccccccccccchhhhhhhcCCCccCCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCCccC
Confidence 010 0 00000 01111 123344555432 2234556666654
Q ss_pred ---ccceeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecC
Q 022733 151 ---ASNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGG 217 (293)
Q Consensus 151 ---ap~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~ 217 (293)
.+.+|..|.|.|.....++.|++..+++.+|+.|.| .|.+.+++.+.+.++|.||+|+++|++|...
T Consensus 162 ~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~ 241 (372)
T PRK14296 162 SNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKLS 241 (372)
T ss_pred CCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEECCCCCCCCEEEEe
Confidence 356899999999999999999988888999999987 6889999999999999999999999999644
Q ss_pred C-------CCCCCceehhhHHH-HHHHHHHhhCCCCC
Q 022733 218 G-------WERPANVFMAAKAF-NKQLQQQAAGGSNP 246 (293)
Q Consensus 218 G-------~~~~~~vf~~~~~~-~~~~~~~~~~~~~~ 246 (293)
| ++.+||+++..+.. +..|+|+..+|||-
T Consensus 242 g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~ 278 (372)
T PRK14296 242 QKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILM 278 (372)
T ss_pred ccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEE
Confidence 4 24578999888554 45555444567765
No 4
>PRK14298 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.9e-34 Score=271.26 Aligned_cols=207 Identities=21% Similarity=0.270 Sum_probs=156.2
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhcccccccccccccccccc-c------
Q 022733 40 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF-H------ 111 (293)
Q Consensus 40 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~-~------ 111 (293)
..|||+||||+++||.+|||+|||+||++||||++++. ++++|++|++||++|+||.+|..||+++..... +
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~~ 83 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAEDI 83 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCcccc
Confidence 46999999999999999999999999999999999754 567999999999999999999999998743211 0
Q ss_pred ccc-----------ccCCCCCCCCCCCCCCCCccccc-----------------cccCcCCCCCcccc------cceeee
Q 022733 112 FGT-----------NASAGFSRSSWKGPPRPEALFVD-----------------ENACIGCRECVHHA------SNTFVM 157 (293)
Q Consensus 112 ~~~-----------~~~~~~~~~~~~gp~r~~difvd-----------------~~~CigC~~C~~~a------p~tf~~ 157 (293)
|+. .+|++.+.....++.++.|+.+. ....+.|..|.+.+ +.+|..
T Consensus 84 ~~~~~~~~~~d~f~~~Fgg~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~ 163 (377)
T PRK14298 84 FRGADFGGFGDIFEMFFGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPT 163 (377)
T ss_pred cccCCcCcchhhhHhhhcCCCccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccCCCCCCcCCC
Confidence 110 01111100001224455565533 23456677776643 478999
Q ss_pred eCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCC-------CC
Q 022733 158 DEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGG-------WE 220 (293)
Q Consensus 158 c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G-------~~ 220 (293)
|.|.|.....++.+.+.++++.+|+.|.| .|.|.+++.+.+.|+|.||||+++|++|...| ++
T Consensus 164 C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~~~ 243 (377)
T PRK14298 164 CGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSGEGEAGSPGA 243 (377)
T ss_pred CCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEEecccCCCCCCC
Confidence 99999988888776677789999999988 68999999999999999999999999996444 24
Q ss_pred CCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 221 RPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 221 ~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
.+||||+..+......++++.+||+-
T Consensus 244 ~~GDL~i~i~v~~h~~F~R~G~DL~~ 269 (377)
T PRK14298 244 PSGDLYIVLHVKEHDYFERVGDDIIS 269 (377)
T ss_pred CCcCEEEEEEEecCCCeEEEcCcEEE
Confidence 57899998866555555566667665
No 5
>PRK14282 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.8e-33 Score=266.59 Aligned_cols=208 Identities=21% Similarity=0.168 Sum_probs=154.1
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc---hHHHHHHHHHHHHhhcccccccccccccccccc-----
Q 022733 39 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK---GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF----- 110 (293)
Q Consensus 39 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~---~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~----- 110 (293)
...|||+||||+++||.+|||+|||+|+++||||+++.. ++++|++|++||++|+||.+|..||.++.....
T Consensus 2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~ 81 (369)
T PRK14282 2 EKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQE 81 (369)
T ss_pred CCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcccccccccc
Confidence 357999999999999999999999999999999998642 567999999999999999999999998743211
Q ss_pred -----cc-cc---------------ccCCCCCC--CCCCCCCCCCccccc-----------------cccCcCCCCCccc
Q 022733 111 -----HF-GT---------------NASAGFSR--SSWKGPPRPEALFVD-----------------ENACIGCRECVHH 150 (293)
Q Consensus 111 -----~~-~~---------------~~~~~~~~--~~~~gp~r~~difvd-----------------~~~CigC~~C~~~ 150 (293)
++ +. .+|++.+. .....+.++.|+.+. ..+.+.|..|.++
T Consensus 82 ~~~~g~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~~C~~C~G~ 161 (369)
T PRK14282 82 TESGGGFFEDIFKDFENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGT 161 (369)
T ss_pred CCCCCcccccccccccccccchhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecccCCCCCcc
Confidence 00 00 00111000 001123344555432 2234556666554
Q ss_pred ------ccceeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEE
Q 022733 151 ------ASNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGV 214 (293)
Q Consensus 151 ------ap~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I 214 (293)
.+.+|..|+|.|.....++.++...+.+.+|+.|.| .|.+.+++.+.+.|+|.||||+++|++|
T Consensus 162 G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i 241 (369)
T PRK14282 162 GVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTVL 241 (369)
T ss_pred CCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEEeCCCCCCCCEE
Confidence 357899999999999888888866777889999987 6899999999999999999999999999
Q ss_pred ecCC-------CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 215 FGGG-------WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 215 ~g~G-------~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
...| ++.+||||+..+......++++.+|++-
T Consensus 242 ~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~ 280 (369)
T PRK14282 242 RITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIY 280 (369)
T ss_pred EEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEE
Confidence 6444 2456899998865554455566666665
No 6
>PRK14288 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2e-33 Score=267.52 Aligned_cols=203 Identities=20% Similarity=0.210 Sum_probs=145.8
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC--chHHHHHHHHHHHHhhcccccccccccccccccc-------
Q 022733 40 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF------- 110 (293)
Q Consensus 40 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~--~~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~------- 110 (293)
..|||+||||+++||.+|||+|||+||++||||+++. .++++|++|++||+||+||.+|..||+++.....
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~~~~~ 81 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQS 81 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCCCCcc
Confidence 3699999999999999999999999999999999973 3678999999999999999999999998753211
Q ss_pred cccc------cc----CCCCCC-CCCCCCCCCCccccc-----------------cccCcCCCCCcccc-----cceeee
Q 022733 111 HFGT------NA----SAGFSR-SSWKGPPRPEALFVD-----------------ENACIGCRECVHHA-----SNTFVM 157 (293)
Q Consensus 111 ~~~~------~~----~~~~~~-~~~~gp~r~~difvd-----------------~~~CigC~~C~~~a-----p~tf~~ 157 (293)
+|+. .. |++.+. +.-..+.++.++.+. ..+...|..|.+++ +.+|..
T Consensus 82 ~~~~~f~~~~~~F~~~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~ 161 (369)
T PRK14288 82 DFSDFFEDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCKQ 161 (369)
T ss_pred ccccchhhHHHHHHhhcCCCCcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccCCCCCcCCCC
Confidence 1110 00 110000 000112344454432 12345666666543 578999
Q ss_pred eCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCC------CCC
Q 022733 158 DEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGG------WER 221 (293)
Q Consensus 158 c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G------~~~ 221 (293)
|.|.|...... |. .+++.+|+.|.| .|.+.+++.+.+.|+|.||||+++|++|...| ++.
T Consensus 162 C~G~G~~~~~~--g~--~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G~~~~~~~ 237 (369)
T PRK14288 162 CNGQGQVFMRQ--GF--MSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGK 237 (369)
T ss_pred CCCCcEEEEEe--ce--EEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCccCCCCCC
Confidence 99999765433 33 356779999988 68899999999999999999999999996554 245
Q ss_pred CCceehhhHHHHHHHHHHhhCCCCC
Q 022733 222 PANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 222 ~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
||||++..........+++.+||+-
T Consensus 238 ~GDL~v~i~v~~h~~f~R~G~DL~~ 262 (369)
T PRK14288 238 RGDLYLEARVKEDEHFKREGCDLFI 262 (369)
T ss_pred CCCEEEEEEEEECCCcEEeCCEEEE
Confidence 7899998866544445555666654
No 7
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.98 E-value=7.5e-33 Score=263.73 Aligned_cols=207 Identities=20% Similarity=0.238 Sum_probs=152.4
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhcccccccccccccccccc-cc---c-
Q 022733 40 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF-HF---G- 113 (293)
Q Consensus 40 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~-~~---~- 113 (293)
..|||+||||+++||.+|||+|||+|+++||||+++.+ ++++|++|++||++|+||.+|+.||+++..... ++ +
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~~~~ 82 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGGA 82 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCCCCC
Confidence 46999999999999999999999999999999999743 567999999999999999999999998753211 01 0
Q ss_pred ----------cccCCCCCC-CCCCCCCCCCccccc-----------------cccCcCCCCCcccc------cceeeeeC
Q 022733 114 ----------TNASAGFSR-SSWKGPPRPEALFVD-----------------ENACIGCRECVHHA------SNTFVMDE 159 (293)
Q Consensus 114 ----------~~~~~~~~~-~~~~gp~r~~difvd-----------------~~~CigC~~C~~~a------p~tf~~c~ 159 (293)
..+|++.+. .....+.++.|+.+. ..+-+.|..|.+.+ +.+|..|.
T Consensus 83 ~~f~~~~d~f~~~fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~ 162 (371)
T PRK14287 83 GDFGGFSDIFDMFFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCG 162 (371)
T ss_pred ccccchHHHHHhhhccccCCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCCCCCCcccCCCC
Confidence 011221110 000123345555433 12334566665543 57899999
Q ss_pred CcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCC-------CCCC
Q 022733 160 ATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGG-------WERP 222 (293)
Q Consensus 160 g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G-------~~~~ 222 (293)
|.|.....++.++...+.+..|+.|.| .|.+.+++.+.+.|+|.||||+++|++|...| ++.+
T Consensus 163 G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~~~~ 242 (371)
T PRK14287 163 GSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPP 242 (371)
T ss_pred CEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEccCCcCCCCCCCC
Confidence 999988888888766667889999987 58888888889999999999999999996444 2457
Q ss_pred CceehhhHHHHHHHHHHhhCCCCC
Q 022733 223 ANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 223 ~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
||+++..+......++++.+|++-
T Consensus 243 GDL~v~i~v~~h~~F~R~G~DL~~ 266 (371)
T PRK14287 243 GDLYVVFNVKPHEFFERDGDDIYC 266 (371)
T ss_pred ccEEEEEEEecCCCEEEecCCeEE
Confidence 899988855444444555666765
No 8
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.98 E-value=1.2e-32 Score=263.20 Aligned_cols=207 Identities=24% Similarity=0.276 Sum_probs=153.7
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhcccccccccccccccccc-cccc---
Q 022733 40 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF-HFGT--- 114 (293)
Q Consensus 40 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~-~~~~--- 114 (293)
..|||+||||+++||.+|||+|||+|+++||||++++. ++++|++|++||++|+||.+|..||+++..... +++.
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~~ 82 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAG 82 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCCC
Confidence 47999999999999999999999999999999999754 668999999999999999999999998753211 0000
Q ss_pred -------------------ccCCCCCC-CCCCCCCCCCccccc-----------------cccCcCCCCCcccc------
Q 022733 115 -------------------NASAGFSR-SSWKGPPRPEALFVD-----------------ENACIGCRECVHHA------ 151 (293)
Q Consensus 115 -------------------~~~~~~~~-~~~~gp~r~~difvd-----------------~~~CigC~~C~~~a------ 151 (293)
.+|++.+. .....+.++.|+.+. ...-+.|..|.+.+
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~ 162 (380)
T PRK14276 83 GFGGFDGSGGFGGFEDIFSSFFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTS 162 (380)
T ss_pred CCCCccccccccchhhHHHHHhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCCcCcccCCCCC
Confidence 01111000 000122344555432 12345666666543
Q ss_pred cceeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCC---
Q 022733 152 SNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGG--- 218 (293)
Q Consensus 152 p~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G--- 218 (293)
+.+|..|.|.|.....++.++...+.+.+|+.|.| .|.|.+++.+.+.++|.||+|+++|++|...|
T Consensus 163 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~G~G~ 242 (380)
T PRK14276 163 PVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQGQGE 242 (380)
T ss_pred CccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCccCCcEEEEecccc
Confidence 56899999999998888888766667889999988 58999999999999999999999999996444
Q ss_pred ----CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 219 ----WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 219 ----~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
++.+|||++..++.....++++.+||+-
T Consensus 243 ~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~ 274 (380)
T PRK14276 243 AGFNGGPYGDLYVVFRVEPSKKFERDGSTIYY 274 (380)
T ss_pred CCCCCCCCcCEEEEEEEEECcceeeecceEEE
Confidence 2356899998866555555556666664
No 9
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=1.1e-32 Score=262.99 Aligned_cols=207 Identities=24% Similarity=0.286 Sum_probs=155.0
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhcccccccccccccccccc-cc-----
Q 022733 40 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF-HF----- 112 (293)
Q Consensus 40 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~-~~----- 112 (293)
..|||+||||+++|+.+|||+|||+|+++||||+++++ ++++|++|++||++|+||.+|..||+++..... ++
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~~ 82 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGF 82 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcCCCCC
Confidence 46999999999999999999999999999999998754 678999999999999999999999998753211 01
Q ss_pred cc--------------ccCCCCCCC-CCCCCCCCCccccc-----------------cccCcCCCCCcccc------cce
Q 022733 113 GT--------------NASAGFSRS-SWKGPPRPEALFVD-----------------ENACIGCRECVHHA------SNT 154 (293)
Q Consensus 113 ~~--------------~~~~~~~~~-~~~gp~r~~difvd-----------------~~~CigC~~C~~~a------p~t 154 (293)
+. .+|++.+.. ....+.++.|+.+. ..+-+.|..|.+++ +.+
T Consensus 83 ~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~ 162 (376)
T PRK14280 83 GGGDFGGGFGFEDIFSSFFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKET 162 (376)
T ss_pred CCCCccccccchhhHHHHhCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCCcccCCCCCCcc
Confidence 00 011110000 00122345555533 12345666666643 578
Q ss_pred eeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCC------
Q 022733 155 FVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGG------ 218 (293)
Q Consensus 155 f~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G------ 218 (293)
|..|+|.|.....++.++...+++.+|+.|.| .|.|.+.+.+.+.++|.||+|+++|++|...|
T Consensus 163 C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~ 242 (376)
T PRK14280 163 CSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPGV 242 (376)
T ss_pred CCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEEcccccCCC
Confidence 99999999988888887766667889999988 58999999999999999999999999996554
Q ss_pred -CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 219 -WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 219 -~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
.+.+||+++..+......++++.+|||-
T Consensus 243 ~~~~~GDL~v~i~v~~h~~F~R~G~DL~~ 271 (376)
T PRK14280 243 NGGPAGDLYVVFRVRPHEFFERDGDDIYC 271 (376)
T ss_pred CCCCCcCEEEEEEEecCCCeEEecCCEEE
Confidence 2356899998866655556666767765
No 10
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=2.6e-32 Score=260.58 Aligned_cols=206 Identities=18% Similarity=0.212 Sum_probs=151.8
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhcccccccccccccccccc------ccc
Q 022733 41 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF------HFG 113 (293)
Q Consensus 41 ~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~------~~~ 113 (293)
.|||+||||+++||.+|||+|||+|+++||||+++++ ++++|++|++||++|+||.+|..||.++..... +++
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~~~g~~ 82 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGGGFG 82 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCCCCCCC
Confidence 6999999999999999999999999999999999754 567999999999999999999999998743110 111
Q ss_pred c----------ccCCCCCCC-C-CCCCCCCCccccc-----------------cccCcCCCCCccc------ccceeeee
Q 022733 114 T----------NASAGFSRS-S-WKGPPRPEALFVD-----------------ENACIGCRECVHH------ASNTFVMD 158 (293)
Q Consensus 114 ~----------~~~~~~~~~-~-~~gp~r~~difvd-----------------~~~CigC~~C~~~------ap~tf~~c 158 (293)
. .+|++.+.. . ...+.++.|+.+. ...-..|..|.++ .+.+|..|
T Consensus 83 ~~f~~~~d~f~~ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C 162 (378)
T PRK14278 83 GGFGGLGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTC 162 (378)
T ss_pred cCcCchhHHHHHHhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccCCCCCCceecCCc
Confidence 0 111111100 0 0122345555533 1234556666654 35689999
Q ss_pred CCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCC-------CCC
Q 022733 159 EATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGG-------WER 221 (293)
Q Consensus 159 ~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G-------~~~ 221 (293)
.|.|.....++.++...+++.+|+.|.| .|.|.+++.+.+.|+|.||||+++|++|...| ++.
T Consensus 163 ~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~ 242 (378)
T PRK14278 163 GGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGP 242 (378)
T ss_pred cCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCCCCcEEEEccCcCCCCCCCC
Confidence 9999888777776666667889999987 68999999999999999999999999996554 245
Q ss_pred CCceehhhHHHHHHHHHHhhCCCCC
Q 022733 222 PANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 222 ~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
+||+++..+......++++.+|++-
T Consensus 243 ~GDL~v~i~~~~h~~F~R~G~DL~~ 267 (378)
T PRK14278 243 AGDLYVEVHEQPHDVFVRDGDDLHC 267 (378)
T ss_pred CCCEEEEEEECcCCCEEEcCCCEEE
Confidence 6899998865554455556666654
No 11
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=3.6e-32 Score=259.91 Aligned_cols=207 Identities=23% Similarity=0.260 Sum_probs=153.6
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHhhcccccccccccccccccc-------
Q 022733 40 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF------- 110 (293)
Q Consensus 40 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~--~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~------- 110 (293)
..|||+||||+++|+.+|||+|||+|+++||||+++.. ++++|++|++||++|+||.+|..||+++.....
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~~~ 82 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGS 82 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCCCC
Confidence 46999999999999999999999999999999999743 668999999999999999999999998753211
Q ss_pred -cccc--------------ccCCCC-CCC--CCCCCCCCCccccc-----------------cccCcCCCCCccc-----
Q 022733 111 -HFGT--------------NASAGF-SRS--SWKGPPRPEALFVD-----------------ENACIGCRECVHH----- 150 (293)
Q Consensus 111 -~~~~--------------~~~~~~-~~~--~~~gp~r~~difvd-----------------~~~CigC~~C~~~----- 150 (293)
+++. .+|++. +.. ....+.++.|+.+. ..+-..|..|.+.
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~ 162 (380)
T PRK14297 83 GGFGGFDFSDMGGFGDIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPG 162 (380)
T ss_pred CCCCCcCcccccchhHHHHHHhccCccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccccCC
Confidence 1100 011110 000 00123345555433 1234456666554
Q ss_pred -ccceeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCC-
Q 022733 151 -ASNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGG- 218 (293)
Q Consensus 151 -ap~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G- 218 (293)
.+.+|..|.|.|.....++.++...+++..|+.|.| .|.+.+.+.+.+.++|.||||+++|++|...|
T Consensus 163 ~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~g~ 242 (380)
T PRK14297 163 TSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRGQ 242 (380)
T ss_pred CcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEecC
Confidence 356899999999988888888777778899999988 58888888899999999999999999996444
Q ss_pred ------CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 219 ------WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 219 ------~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
++.++|+|+..+......++++..||+-
T Consensus 243 G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~ 276 (380)
T PRK14297 243 GEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYI 276 (380)
T ss_pred ccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEE
Confidence 2347899998866555555556666664
No 12
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=5.7e-32 Score=250.11 Aligned_cols=205 Identities=25% Similarity=0.338 Sum_probs=152.5
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHhhccccccccccccccccccc--ccc--
Q 022733 39 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFH--FGT-- 114 (293)
Q Consensus 39 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~--~~~-- 114 (293)
.+..||+||||+++||.+|||+|||+|+++||||+|++ +.++|++|++||+||+||++|..||+++...... ++.
T Consensus 2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~-~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~g~ 80 (337)
T KOG0712|consen 2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD-AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGGGF 80 (337)
T ss_pred cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc-HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCCCC
Confidence 35789999999999999999999999999999999987 7789999999999999999999999998654321 111
Q ss_pred ----ccCCCCCCCCCCCCCCCCccccc-----------------cccCcCCCCCccccc-----ceeeeeCCcceEEEEE
Q 022733 115 ----NASAGFSRSSWKGPPRPEALFVD-----------------ENACIGCRECVHHAS-----NTFVMDEATGCARVKV 168 (293)
Q Consensus 115 ----~~~~~~~~~~~~gp~r~~difvd-----------------~~~CigC~~C~~~ap-----~tf~~c~g~G~~~v~~ 168 (293)
.+|+ +++...+++.++.++-.+ ...-.-|..|.+..+ ..|..|.+.|....++
T Consensus 81 ~~f~~~F~-~g~~~~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~C~GsGv~~~~~ 159 (337)
T KOG0712|consen 81 GGFSQFFG-FGGNGGRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTTCRGSGVQTRTR 159 (337)
T ss_pred ccHHHhcc-CCCcCccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCCCCCCCCCCCCceeEEE
Confidence 1111 222222333344444322 223445666655433 2599999999999999
Q ss_pred ecCc-ccceecccccCCCc------------ceeeeeeecccceEEEEeCCCCCCCcEEe--cCCCC----CCCceehhh
Q 022733 169 QYGD-SDQNIEVSVDSCPV------------NCIHWVDREELPVLEFLIQPQPKKGYGVF--GGGWE----RPANVFMAA 229 (293)
Q Consensus 169 q~g~-~~~~iq~ac~~Cpg------------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~--g~G~~----~~~~vf~~~ 229 (293)
++++ +.++++..|..|.| .|++.+++++.++|+|.|++|++++++|. +.+.+ -|+|+.+..
T Consensus 160 ~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~geadea~g~~pgD~vl~i 239 (337)
T KOG0712|consen 160 QMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFKGEADEAPGTKPGDVVLLI 239 (337)
T ss_pred eccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccceeeeeeeeeecCCCcCccEEEEe
Confidence 9999 99999999999988 69999999999999999999999999984 44432 256655555
Q ss_pred HHH-HHHHHHHhhCCCCC
Q 022733 230 KAF-NKQLQQQAAGGSNP 246 (293)
Q Consensus 230 ~~~-~~~~~~~~~~~~~~ 246 (293)
... +..|.|+ .+||..
T Consensus 240 ~~k~h~~F~Rr-g~dL~~ 256 (337)
T KOG0712|consen 240 DQKEHPGFDRR-GSDLYR 256 (337)
T ss_pred cccccccceec-ccccce
Confidence 333 4444444 433433
No 13
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=6.9e-32 Score=258.69 Aligned_cols=204 Identities=21% Similarity=0.283 Sum_probs=146.5
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHhhccccccccccccccc----c--c-
Q 022733 39 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDASIGQ----M--R- 109 (293)
Q Consensus 39 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~--~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~----~--~- 109 (293)
..+|||+||||+++|+.+|||+|||+|+++||||+++.. +.++|++|++||+||+||++|+.||+++.. . .
T Consensus 7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~ 86 (392)
T PRK14279 7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGR 86 (392)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhccccccccc
Confidence 357999999999999999999999999999999999743 678999999999999999999999998631 0 0
Q ss_pred -----ccccc-------------ccCC--------C--CCCCCC----------CCCCCCCccccc--------------
Q 022733 110 -----FHFGT-------------NASA--------G--FSRSSW----------KGPPRPEALFVD-------------- 137 (293)
Q Consensus 110 -----~~~~~-------------~~~~--------~--~~~~~~----------~gp~r~~difvd-------------- 137 (293)
.+++. ..|+ + .-|+.+ ..+.++.|+.+.
T Consensus 87 ~~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G~~~ 166 (392)
T PRK14279 87 RFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTM 166 (392)
T ss_pred cccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCCCcccccCCCCCCCCeEEEEEEEHHHHhCCeEE
Confidence 00000 0000 0 000110 112344555433
Q ss_pred ---cccCcCCCCCcccc------cceeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccc
Q 022733 138 ---ENACIGCRECVHHA------SNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELP 198 (293)
Q Consensus 138 ---~~~CigC~~C~~~a------p~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k 198 (293)
..+-+.|..|.+++ +.+|..|+|.|...... +.+ +++.+|+.|.| .|.+.+++.+.+
T Consensus 167 ~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~--g~~--~~~~~C~~C~G~G~~i~~~C~~C~G~g~v~~~~ 242 (392)
T PRK14279 167 PLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQ--GAF--GFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTR 242 (392)
T ss_pred EEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEe--cce--EEEEecCCCCceeEEeCCcCCCCCCCeEEEEee
Confidence 22345666666543 56899999999765443 433 57799999988 689999999999
Q ss_pred eEEEEeCCCCCCCcEEecCC-------CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 199 VLEFLIQPQPKKGYGVFGGG-------WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 199 ~LeV~Ip~G~~~G~~I~g~G-------~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
.++|.||||+++|++|...| ++.+|||++..+......++++.+|++-
T Consensus 243 ~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~ 297 (392)
T PRK14279 243 TINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTV 297 (392)
T ss_pred eeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEE
Confidence 99999999999999996554 2346899998866555555566666664
No 14
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=1.3e-31 Score=256.23 Aligned_cols=203 Identities=25% Similarity=0.331 Sum_probs=146.4
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhcccccccccccccccccc--------
Q 022733 40 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF-------- 110 (293)
Q Consensus 40 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~-------- 110 (293)
..|||+||||+++||.+|||+|||+|+++||||+++++ ++++|++|++||++|+||.+|..||.++.....
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~ 81 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG 81 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCcccc
Confidence 36999999999999999999999999999999999754 568999999999999999999999998743210
Q ss_pred --cccc-----------cc---CC-CCCCCC----------CCCCCCCCccccc-----------------cccCcCCCC
Q 022733 111 --HFGT-----------NA---SA-GFSRSS----------WKGPPRPEALFVD-----------------ENACIGCRE 146 (293)
Q Consensus 111 --~~~~-----------~~---~~-~~~~~~----------~~gp~r~~difvd-----------------~~~CigC~~ 146 (293)
+++. .+ |+ +..+.. ...+.++.|+.+. ...-+.|..
T Consensus 82 ~~~~~~~~~~~~~d~f~~~f~~fg~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~ 161 (382)
T PRK14291 82 QEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEA 161 (382)
T ss_pred ccccccccCCCHHHHHHHHHHhccccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeeccCCC
Confidence 1100 00 00 000000 0112345555433 123455666
Q ss_pred Ccccc------cceeeeeCCcceEEEEEecCcccceecccccCCCc---------ceeeeeeecccceEEEEeCCCCCCC
Q 022733 147 CVHHA------SNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV---------NCIHWVDREELPVLEFLIQPQPKKG 211 (293)
Q Consensus 147 C~~~a------p~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg---------~Cig~~~~~e~k~LeV~Ip~G~~~G 211 (293)
|.+.+ +.+|..|.|.|..... . +..+++.+|+.|.| .|.+.+++.+.+.|+|.||||+++|
T Consensus 162 C~G~G~~~~~~~~~C~~C~G~G~~~~~--~--g~~~~~~~C~~C~G~G~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G 237 (382)
T PRK14291 162 CGGTGYDPGSGEKVCPTCGGSGEIYQR--G--GFFRISQTCPTCGGEGVLREPCSKCNGRGLVIKKETIKVRIPPGVDNG 237 (382)
T ss_pred CccccCCCCCCCccCCCCCCceEEEEe--c--ceEEEEecCCCCCCceEEccCCCCCCCCceEEeeeEEEEEeCCCCCCC
Confidence 66543 6689999999865544 2 34567889999987 6889999999999999999999999
Q ss_pred cEEecCC-------CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 212 YGVFGGG-------WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 212 ~~I~g~G-------~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
++|...| ++.|||||+..+......++++.+|++-
T Consensus 238 ~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~ 279 (382)
T PRK14291 238 SKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYL 279 (382)
T ss_pred CEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEE
Confidence 9996444 2468899998865554455556656654
No 15
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=6.8e-32 Score=257.24 Aligned_cols=204 Identities=25% Similarity=0.319 Sum_probs=148.1
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC--chHHHHHHHHHHHHhhcccccccccccccccccc----cc
Q 022733 39 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF----HF 112 (293)
Q Consensus 39 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~--~~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~----~~ 112 (293)
...|||+||||+++||.+|||+|||+|+++||||+++. .++++|++|++||+||+||.+|..||+++..... ++
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~ 81 (372)
T PRK14286 2 SERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGF 81 (372)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCCC
Confidence 35799999999999999999999999999999999974 3678999999999999999999999998743210 00
Q ss_pred cc------------------ccCCCCC-C----CCCCCCCCCCccccc-----------------cccCcCCCCCcccc-
Q 022733 113 GT------------------NASAGFS-R----SSWKGPPRPEALFVD-----------------ENACIGCRECVHHA- 151 (293)
Q Consensus 113 ~~------------------~~~~~~~-~----~~~~gp~r~~difvd-----------------~~~CigC~~C~~~a- 151 (293)
+. .+|++.+ . .....+.++.|+.+. ..+-+.|..|.+++
T Consensus 82 ~~~~~~~~~~~~~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~ 161 (372)
T PRK14286 82 GQGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGA 161 (372)
T ss_pred CCCCcccccccccchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCCCc
Confidence 00 0111110 0 000123345565533 12345566666543
Q ss_pred -----cceeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEec
Q 022733 152 -----SNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFG 216 (293)
Q Consensus 152 -----p~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g 216 (293)
+.+|..|.|.|..... .|.+ +++..|+.|.| .|.+.+++.+.+.|+|.||||+++|++|..
T Consensus 162 ~~~~~~~~C~~C~G~G~v~~~--~G~~--~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~ 237 (372)
T PRK14286 162 SKGSSPTTCPDCGGSGQIRRT--QGFF--SVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKV 237 (372)
T ss_pred CCCCCCccCCCCcCeEEEEEE--eceE--EEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCCCCCEEEE
Confidence 5689999999976544 2433 57789999988 599999999999999999999999999965
Q ss_pred CC-------CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 217 GG-------WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 217 ~G-------~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
.| ++.+||+|+..+......++++.+|++-
T Consensus 238 ~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~ 274 (372)
T PRK14286 238 SGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLIL 274 (372)
T ss_pred CCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEE
Confidence 54 2346899998866555555566666665
No 16
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=1.3e-31 Score=256.42 Aligned_cols=207 Identities=24% Similarity=0.290 Sum_probs=152.3
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHhhcccccccccccccccccc--ccc--
Q 022733 40 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF--HFG-- 113 (293)
Q Consensus 40 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~--~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~--~~~-- 113 (293)
..|||+||||+++||.+|||+|||+|+++||||+++.. ++++|++|++||++|+||.+|..||.++..... +++
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~ 83 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQG 83 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccccccC
Confidence 46999999999999999999999999999999999743 567999999999999999999999998743210 000
Q ss_pred ----cc-------------------cCCCC-CC-CC--CCCCCCCCccccc-----------------cccCcCCCCCcc
Q 022733 114 ----TN-------------------ASAGF-SR-SS--WKGPPRPEALFVD-----------------ENACIGCRECVH 149 (293)
Q Consensus 114 ----~~-------------------~~~~~-~~-~~--~~gp~r~~difvd-----------------~~~CigC~~C~~ 149 (293)
.+ +|++. +. .. ..++.++.|+.+. ..+-+.|..|.+
T Consensus 84 ~~~~~g~~~~~~~~~~~~~~d~f~~~F~~~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~~C~G 163 (386)
T PRK14277 84 GFGQGGFGGGGFDFDFGGFGDIFEDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKG 163 (386)
T ss_pred CcCCCCccccCccccccchhHHHHHhhcccccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCCCCCC
Confidence 00 01100 00 00 0123345555432 123445555654
Q ss_pred c------ccceeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcE
Q 022733 150 H------ASNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYG 213 (293)
Q Consensus 150 ~------ap~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~ 213 (293)
. .+.+|..|.|.|.....++.++...+.+.+|+.|.| .|.+.+++.+.+.|+|.||||+++|++
T Consensus 164 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~ 243 (386)
T PRK14277 164 SGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQM 243 (386)
T ss_pred CCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEEEecCCCccCCcE
Confidence 3 367899999999988888888766666789999988 689999999999999999999999999
Q ss_pred EecCC-------CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 214 VFGGG-------WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 214 I~g~G-------~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
|...| ++.+||+|+..+......++++.+||+-
T Consensus 244 i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~ 283 (386)
T PRK14277 244 ITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYL 283 (386)
T ss_pred EEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEE
Confidence 96554 2346899998866555555566666665
No 17
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=9.8e-32 Score=255.54 Aligned_cols=202 Identities=20% Similarity=0.253 Sum_probs=145.9
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHhhcccccccccccccccccc---c---c
Q 022733 41 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF---H---F 112 (293)
Q Consensus 41 ~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~--~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~---~---~ 112 (293)
.|||+||||+++||.+|||+|||+|+++||||+++.. +.++|++|++||++|+||.+|..||.++..... + +
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~~~~ 82 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEGF 82 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCcccc
Confidence 6999999999999999999999999999999999743 568999999999999999999999998743210 0 0
Q ss_pred ccc-----------------cCCCCCCC-CCCCCCCCCccccc-----------------cccCcCCCCCcccc------
Q 022733 113 GTN-----------------ASAGFSRS-SWKGPPRPEALFVD-----------------ENACIGCRECVHHA------ 151 (293)
Q Consensus 113 ~~~-----------------~~~~~~~~-~~~gp~r~~difvd-----------------~~~CigC~~C~~~a------ 151 (293)
..+ +|++.+.. .-..+.++.|+.+. ..+-+.|..|.+++
T Consensus 83 ~~g~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~ 162 (365)
T PRK14285 83 SGGFSGFSDIFEDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTS 162 (365)
T ss_pred CCCccccccccccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCcccCCCCC
Confidence 000 11110000 00113345555533 12345666666653
Q ss_pred cceeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCC---
Q 022733 152 SNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGG--- 218 (293)
Q Consensus 152 p~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G--- 218 (293)
+.+|..|.|.|.... ..|. .+++..|+.|.| .|.+.+++.+.+.++|.||||+.+|++|...|
T Consensus 163 ~~~C~~C~G~G~~~~--~~G~--~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~ 238 (365)
T PRK14285 163 PSICNMCNGSGRVMQ--GGGF--FRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKGS 238 (365)
T ss_pred CccCCCccCceeEEe--cCce--eEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCCCCCCEEEEeeccc
Confidence 568999999986543 2332 378999999988 68999999999999999999999999996444
Q ss_pred ----CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 219 ----WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 219 ----~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
++.|||+|+..+.......+++..||+.
T Consensus 239 ~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~ 270 (365)
T PRK14285 239 VNPDNQQYGDLYIKILIKPHKIFKRNGKDLYA 270 (365)
T ss_pred cCCCCCCCCCEEEEEEEecCCCeEEeccceEE
Confidence 2457899988865554455556666665
No 18
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=2.3e-31 Score=253.28 Aligned_cols=204 Identities=24% Similarity=0.261 Sum_probs=147.0
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHhhcccccccccccccccccc--cccc
Q 022733 39 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF--HFGT 114 (293)
Q Consensus 39 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~--~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~--~~~~ 114 (293)
...|||+||||+++||.+|||+|||+|+++||||+++.. ++++|++|++||+||+||.+|..||+++..... +++.
T Consensus 2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~~~ 81 (366)
T PRK14294 2 VKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSG 81 (366)
T ss_pred CCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCCCC
Confidence 457999999999999999999999999999999999743 568999999999999999999999998753211 1100
Q ss_pred --c--------------cCC-CCCC--CCCCCCCCCCccccc-----------------cccCcCCCCCcccc------c
Q 022733 115 --N--------------ASA-GFSR--SSWKGPPRPEALFVD-----------------ENACIGCRECVHHA------S 152 (293)
Q Consensus 115 --~--------------~~~-~~~~--~~~~gp~r~~difvd-----------------~~~CigC~~C~~~a------p 152 (293)
+ +|+ +.+. .....+.++.|+.+. ...-..|..|.+.+ +
T Consensus 82 ~~~~~~~~~~~~d~f~~~fg~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~ 161 (366)
T PRK14294 82 FSGFDDIFSSFGDIFEDFFGFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSP 161 (366)
T ss_pred cCccccchhhhhhhHHHhhccCCCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccCCCCc
Confidence 0 111 0000 001123344555432 22344566665543 5
Q ss_pred ceeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCC----
Q 022733 153 NTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGG---- 218 (293)
Q Consensus 153 ~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G---- 218 (293)
.+|..|.|.|.... +.|.+ +++..|+.|.| .|.|.+++.+.+.++|.||||+++|++|...|
T Consensus 162 ~~C~~C~G~G~~~~--~~G~~--~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~ 237 (366)
T PRK14294 162 TTCPQCGGSGQVTQ--SQGFF--SIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGEA 237 (366)
T ss_pred ccCCCcCCeEEEEE--EeeeE--EEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCccC
Confidence 68999999886543 33433 57899999988 68999999999999999999999999996544
Q ss_pred ---CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 219 ---WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 219 ---~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
++.+||+++..+......++++..|++-
T Consensus 238 ~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~ 268 (366)
T PRK14294 238 GVRGGPPGDLYVFLTVEPHEFFERDGNDVHC 268 (366)
T ss_pred CCCCCCCCcEEEEEEEccCCcceecCCCEEE
Confidence 2457899888866555555566667765
No 19
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=2.9e-31 Score=254.52 Aligned_cols=202 Identities=20% Similarity=0.249 Sum_probs=144.5
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHhhccccccccccccccccc---------
Q 022733 41 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMR--------- 109 (293)
Q Consensus 41 ~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~--~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~--------- 109 (293)
.|||+||||+++||.+|||+|||+|+++||||++++. ++++|++|++||++|+||.+|+.||+++....
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~~~ 80 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGG 80 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCcCC
Confidence 4899999999999999999999999999999999753 66799999999999999999999999874311
Q ss_pred ccccc------------------------ccCCCCC--CCCC---CCCCCCCccccc-----------------cccCcC
Q 022733 110 FHFGT------------------------NASAGFS--RSSW---KGPPRPEALFVD-----------------ENACIG 143 (293)
Q Consensus 110 ~~~~~------------------------~~~~~~~--~~~~---~gp~r~~difvd-----------------~~~Cig 143 (293)
.+++. .+|++.+ ++.. ..+.++.++.+. ...-+.
T Consensus 81 ~g~~~~~~~~~~~~~~f~~~~~~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~ 160 (391)
T PRK14284 81 AGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKS 160 (391)
T ss_pred CCcCcccchhhhccccccccccccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeeecc
Confidence 01100 0011100 0000 112344454432 123445
Q ss_pred CCCCccc------ccceeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCC
Q 022733 144 CRECVHH------ASNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQ 207 (293)
Q Consensus 144 C~~C~~~------ap~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G 207 (293)
|..|.++ .+.+|..|.|.|...... |. .+++..|+.|.| .|.+.+++.+.+.|+|.||||
T Consensus 161 C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~--G~--~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G 236 (391)
T PRK14284 161 CDACSGSGANSSQGIKVCDRCKGSGQVVQSR--GF--FSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAG 236 (391)
T ss_pred CCCCcccccCCCCCCeecCccCCeeEEEEEe--ce--EEEEEECCCCCCCCcccCCcCCCCCCcceecceEEEEEEECCC
Confidence 6666543 356899999998765433 43 357789999988 689999999999999999999
Q ss_pred CCCCcEEecCC-------CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 208 PKKGYGVFGGG-------WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 208 ~~~G~~I~g~G-------~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
+++|++|...| ++.||||++..+......++++.+||+-
T Consensus 237 ~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~ 282 (391)
T PRK14284 237 VDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLIL 282 (391)
T ss_pred CCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEE
Confidence 99999996444 3567899998866554455555656654
No 20
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.97 E-value=3.6e-31 Score=251.03 Aligned_cols=205 Identities=26% Similarity=0.302 Sum_probs=152.5
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhcccccccccccccccccc--------cc
Q 022733 42 NYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF--------HF 112 (293)
Q Consensus 42 d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~--------~~ 112 (293)
|||+||||+++|+.+|||+|||+|+++||||+++.. +.++|++|++||++|+||.+|..||.++..... ++
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~~~ 80 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGF 80 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCCCc
Confidence 799999999999999999999999999999999743 668999999999999999999999998743211 01
Q ss_pred cc--------------ccCCCC-CCCC--CCCCCCCCccccc-----------------cccCcCCCCCcccc------c
Q 022733 113 GT--------------NASAGF-SRSS--WKGPPRPEALFVD-----------------ENACIGCRECVHHA------S 152 (293)
Q Consensus 113 ~~--------------~~~~~~-~~~~--~~gp~r~~difvd-----------------~~~CigC~~C~~~a------p 152 (293)
.+ .+|++. +... ...+.++.|+.+. ..+-+.|..|.+.+ +
T Consensus 81 ~~~~~~~~~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~ 160 (354)
T TIGR02349 81 NGFDIGFFGDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDP 160 (354)
T ss_pred CCccccCcCchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCCCCCC
Confidence 00 011110 0000 0123344555433 22445677776654 5
Q ss_pred ceeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCC--C-
Q 022733 153 NTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGG--W- 219 (293)
Q Consensus 153 ~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G--~- 219 (293)
.+|..|.|.|.....++.+++..+.+..|+.|.| .|.+.+++.+.+.|+|.||||+++|++|...| .
T Consensus 161 ~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~ 240 (354)
T TIGR02349 161 KTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGKGNA 240 (354)
T ss_pred ccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCCCCCEEEEecCccC
Confidence 6899999999998888888866667889999988 68999999999999999999999999996444 2
Q ss_pred ----CCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 220 ----ERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 220 ----~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
+.+||+++..+.......+++.+|++-
T Consensus 241 ~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~ 271 (354)
T TIGR02349 241 GENGGPNGDLYVVIRVKPHKIFERDGNDLYI 271 (354)
T ss_pred CCCCCCCCCEEEEEEEecCcceEEecCCEEE
Confidence 346899998855554455555656665
No 21
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=4.2e-31 Score=252.45 Aligned_cols=208 Identities=24% Similarity=0.327 Sum_probs=152.9
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC-chHHHHHHHHHHHHhhccccccccccccccccccccc----
Q 022733 39 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFG---- 113 (293)
Q Consensus 39 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~-~~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~---- 113 (293)
...|||+||||+++||.+|||+|||+|+++||||++++ .++++|++|++||++|+||.+|..||+++.....+++
T Consensus 3 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~~~~~~ 82 (378)
T PRK14283 3 EKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQEDI 82 (378)
T ss_pred CcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhccccccccccccc
Confidence 35799999999999999999999999999999999974 3678999999999999999999999998743211100
Q ss_pred ----------cccCCCC--CCCCC-------CCCCCCCcccccc-----------------ccCcCCCCCccc------c
Q 022733 114 ----------TNASAGF--SRSSW-------KGPPRPEALFVDE-----------------NACIGCRECVHH------A 151 (293)
Q Consensus 114 ----------~~~~~~~--~~~~~-------~gp~r~~difvd~-----------------~~CigC~~C~~~------a 151 (293)
.+++++. .++.| .++.++.++.++. ..-..|..|.+. .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~f~~~~fgg~~~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~ 162 (378)
T PRK14283 83 FNNINFEDIFQGFGFGIGNIFDMFGFGGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSE 162 (378)
T ss_pred ccccCccccccccccchhhhccccccCCCCCCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccccCCCCC
Confidence 0000000 01111 1234555655431 123445555543 4
Q ss_pred cceeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCC---
Q 022733 152 SNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGG--- 218 (293)
Q Consensus 152 p~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G--- 218 (293)
+..|..|.|.|.....++.++...+.+..|+.|.| .|.+.+.+.+.+.++|.||||+++|++|...|
T Consensus 163 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g~G~ 242 (378)
T PRK14283 163 VKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGE 242 (378)
T ss_pred CccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEecccc
Confidence 56899999999998888887755566789999988 68999999999999999999999999996544
Q ss_pred ----CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 219 ----WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 219 ----~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
.+.+||+++..+......++++.+|++-
T Consensus 243 ~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~ 274 (378)
T PRK14283 243 MGDRGGEPGDLYVVIKVKPHKIFRREGANLYY 274 (378)
T ss_pred CCCCCCCCccEEEEEEEEcCCCEEEecCCEEE
Confidence 2457899998866555555556666654
No 22
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=5.1e-31 Score=251.33 Aligned_cols=203 Identities=23% Similarity=0.276 Sum_probs=147.1
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHhhcccccccccccccccccc------c
Q 022733 40 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF------H 111 (293)
Q Consensus 40 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~--~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~------~ 111 (293)
..|||+||||+++||.+|||+|||+|+++||||+++.. ++++|++|++||+||+||.+|..||.++..... +
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~~~~g 82 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGG 82 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCCCCCC
Confidence 47999999999999999999999999999999999753 567999999999999999999999998753211 1
Q ss_pred ccc-------------ccCCCCCC--CCCCCCCCCCccccc-----------------cccCcCCCCCcccc------cc
Q 022733 112 FGT-------------NASAGFSR--SSWKGPPRPEALFVD-----------------ENACIGCRECVHHA------SN 153 (293)
Q Consensus 112 ~~~-------------~~~~~~~~--~~~~gp~r~~difvd-----------------~~~CigC~~C~~~a------p~ 153 (293)
|.. .+|++.+. ..-..+.++.|+.+. ..+.+.|..|.+.+ +.
T Consensus 83 ~~~~~~~~~~f~d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~ 162 (373)
T PRK14301 83 FSSAEDIFSHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPE 162 (373)
T ss_pred cccccccccchHHHHHHHhhccCcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCCCCCc
Confidence 100 00110000 001123345555533 22345666666543 56
Q ss_pred eeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCC-----
Q 022733 154 TFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGG----- 218 (293)
Q Consensus 154 tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G----- 218 (293)
+|..|.|.|.... +.|. .+++..|+.|.| .|.|.+++.+.+.++|.||||+++|++|...|
T Consensus 163 ~C~~C~G~G~v~~--~~G~--~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~ 238 (373)
T PRK14301 163 TCRHCGGSGQVRQ--SQGF--FQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPG 238 (373)
T ss_pred ccCCccCeeEEEE--Eeee--EEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCCCEEEEeccccCC
Confidence 8999999987653 3343 456899999987 68999999999999999999999999996444
Q ss_pred --CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 219 --WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 219 --~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
++.+||+++..+.......+++.+|++-
T Consensus 239 ~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~ 268 (373)
T PRK14301 239 VHGGPPGDLYVVITVEDDKIFQRQGQDLVV 268 (373)
T ss_pred CCCCCCcCEEEEEEEEECCCceeecCcEEE
Confidence 2456899998866555555566667654
No 23
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=3.7e-31 Score=251.70 Aligned_cols=206 Identities=21% Similarity=0.255 Sum_probs=151.9
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc---hHHHHHHHHHHHHhhccccccccccccccccc----cccc
Q 022733 41 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK---GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMR----FHFG 113 (293)
Q Consensus 41 ~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~---~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~----~~~~ 113 (293)
.|||+||||+++||.+|||+|||+|+++||||+++.. +.++|++|++||++|+||.+|..||.++.... .+++
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~~~ 82 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFN 82 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCCcc
Confidence 6999999999999999999999999999999998753 56799999999999999999999999875311 0111
Q ss_pred c--------------ccCCCC-CC---CCC-CCC---CCCCccccc-----------------cccCcCCCCCcccc---
Q 022733 114 T--------------NASAGF-SR---SSW-KGP---PRPEALFVD-----------------ENACIGCRECVHHA--- 151 (293)
Q Consensus 114 ~--------------~~~~~~-~~---~~~-~gp---~r~~difvd-----------------~~~CigC~~C~~~a--- 151 (293)
. .+|++. +. +.+ ..+ .++.|+... ..+...|..|.+.+
T Consensus 83 ~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~g~~~ 162 (365)
T PRK14290 83 WDNFTHFSDINDIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKN 162 (365)
T ss_pred ccccccccchhHHHHHHhcCccccccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCccccCCC
Confidence 0 011110 00 000 001 113454432 22345555665543
Q ss_pred --cceeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCC-
Q 022733 152 --SNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGG- 218 (293)
Q Consensus 152 --p~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G- 218 (293)
+.+|..|.|.|.....++.|.+.++++..|+.|.| .|.+.+++.+.+.|+|.||||+++|++|...|
T Consensus 163 ~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~ 242 (365)
T PRK14290 163 GKLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRVKGK 242 (365)
T ss_pred CCCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEEccc
Confidence 46899999999888777777777778899999987 68999999999999999999999999997555
Q ss_pred ----CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 219 ----WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 219 ----~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
++.||||++..++.....++++..|++-
T Consensus 243 G~~~~~~~GDL~v~v~v~~h~~F~R~G~DL~~ 274 (365)
T PRK14290 243 GQSYGGRTGDLYVVLRVNNDPNIQRINDDLYV 274 (365)
T ss_pred cCCCCCCCCCEEEEEEEcCCCCEEEecCCEEE
Confidence 3468999998866555555566666654
No 24
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=4.8e-31 Score=251.53 Aligned_cols=204 Identities=24% Similarity=0.308 Sum_probs=146.1
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHhhcccccccccccccccccc------
Q 022733 39 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF------ 110 (293)
Q Consensus 39 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~--~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~------ 110 (293)
...|||+||||+++||.+|||+|||+|+++||||+++.. ++++|++|++||++|+||.+|..||.++.....
T Consensus 2 ~~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~ 81 (371)
T PRK10767 2 AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGG 81 (371)
T ss_pred CCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCCCC
Confidence 346999999999999999999999999999999998743 567999999999999999999999998743211
Q ss_pred cccc--c-------c----CCCCCCCCCCCCCCCCccccc-----------------cccCcCCCCCcccc------cce
Q 022733 111 HFGT--N-------A----SAGFSRSSWKGPPRPEALFVD-----------------ENACIGCRECVHHA------SNT 154 (293)
Q Consensus 111 ~~~~--~-------~----~~~~~~~~~~gp~r~~difvd-----------------~~~CigC~~C~~~a------p~t 154 (293)
+++. + . |++.+......+.++.|+.+. ....+.|..|.+.+ +.+
T Consensus 82 ~~~~~~~~~~~f~~~f~~~fgg~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~ 161 (371)
T PRK10767 82 GFGGGGGFGDIFGDIFGDIFGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKT 161 (371)
T ss_pred CCCCccccccchhhhhhhhccCCccccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCCCCCCcc
Confidence 1110 0 0 110000000123455555432 22455666776653 458
Q ss_pred eeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCC------
Q 022733 155 FVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGG------ 218 (293)
Q Consensus 155 f~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G------ 218 (293)
|..|.|.|.....+ |.. +++.+|+.|.| .|.|.+++.+.+.++|.||||+++|++|...|
T Consensus 162 C~~C~G~G~~~~~~--g~~--~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~ 237 (371)
T PRK10767 162 CPTCHGAGQVRMQQ--GFF--TVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGE 237 (371)
T ss_pred CCCCCCeeEEEEee--ceE--EEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEEEEecCccCCC
Confidence 99999999755443 432 47789999988 58899999999999999999999999996444
Q ss_pred -CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 219 -WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 219 -~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
++.+||+|+..+......++++.+|++.
T Consensus 238 ~~~~~GDL~v~i~v~~h~~F~R~G~DL~~ 266 (371)
T PRK10767 238 RGGPAGDLYVQIHVKEHPIFERDGNDLYC 266 (371)
T ss_pred CCCCCcCEEEEEEEeeCCCEEEecCCEEE
Confidence 2357899988855444445555656654
No 25
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=9.7e-31 Score=251.24 Aligned_cols=206 Identities=24% Similarity=0.277 Sum_probs=150.2
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHhhcccccccccccccccccc--------
Q 022733 41 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF-------- 110 (293)
Q Consensus 41 ~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~--~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~-------- 110 (293)
.|||+||||+++|+.+|||+|||+|+++||||+++.. ++++|++|++||++|+||.+|..||.++.....
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~~~~ 82 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGG 82 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccccccCCC
Confidence 6999999999999999999999999999999999753 568999999999999999999999998743110
Q ss_pred -cccc-------------ccCCCCC---------------CCCC----CCCCCCCccccc-----------------ccc
Q 022733 111 -HFGT-------------NASAGFS---------------RSSW----KGPPRPEALFVD-----------------ENA 140 (293)
Q Consensus 111 -~~~~-------------~~~~~~~---------------~~~~----~gp~r~~difvd-----------------~~~ 140 (293)
+++. .+|++.+ .... ..+.++.|+.+. ..+
T Consensus 83 ~~~~~~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~r 162 (397)
T PRK14281 83 PGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIKK 162 (397)
T ss_pred CCCCcCCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEEEEe
Confidence 0100 1122100 0000 011234455433 112
Q ss_pred CcCCCCCccc-----ccceeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeC
Q 022733 141 CIGCRECVHH-----ASNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQ 205 (293)
Q Consensus 141 CigC~~C~~~-----ap~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip 205 (293)
-+.|..|.+. .+.+|..|.|.|......+.++...+.+.+|+.|.| .|.|.+++.+.+.|+|.||
T Consensus 163 ~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip 242 (397)
T PRK14281 163 QVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKVTVP 242 (397)
T ss_pred eecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCCccEecceEEEEecC
Confidence 3344444443 356899999999888777777766666889999988 6899999999999999999
Q ss_pred CCCCCCcEEecCC-------CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 206 PQPKKGYGVFGGG-------WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 206 ~G~~~G~~I~g~G-------~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
||+++|++|...| ++.+||+++..+......++++.+||+-
T Consensus 243 ~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~ 290 (397)
T PRK14281 243 AGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIY 290 (397)
T ss_pred CCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEE
Confidence 9999999996544 2467899998866555555566666665
No 26
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.96 E-value=2.9e-30 Score=247.36 Aligned_cols=208 Identities=23% Similarity=0.199 Sum_probs=152.0
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHhhcccccccccccccccccc------
Q 022733 39 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF------ 110 (293)
Q Consensus 39 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~--~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~------ 110 (293)
...|||++|||+++||.+|||+|||+|+++||||+++.. ++++|++|++||++|+||.+|..||.++.....
T Consensus 3 ~~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~~~~ 82 (386)
T PRK14289 3 EKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGG 82 (386)
T ss_pred ccCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCCCCC
Confidence 357999999999999999999999999999999999743 678999999999999999999999998643110
Q ss_pred cccc-c---------c---CCCC--CC------C---CCCCCCCCCccccc-----------------cccCcCCCCCcc
Q 022733 111 HFGT-N---------A---SAGF--SR------S---SWKGPPRPEALFVD-----------------ENACIGCRECVH 149 (293)
Q Consensus 111 ~~~~-~---------~---~~~~--~~------~---~~~gp~r~~difvd-----------------~~~CigC~~C~~ 149 (293)
+++. + + |++. +. . ....+.++.++.+. ..+-+.|..|.+
T Consensus 83 ~~~~~~~~~~~~f~~f~~~fg~~~gg~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G 162 (386)
T PRK14289 83 GFSGEGMSMEDIFSMFGDIFGGHGGGFGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHG 162 (386)
T ss_pred CCCCCCcChhhhhHHhhhhhcccccCcccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCCC
Confidence 1110 0 0 1110 00 0 00112334444432 123455666655
Q ss_pred cc------cceeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcE
Q 022733 150 HA------SNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYG 213 (293)
Q Consensus 150 ~a------p~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~ 213 (293)
.. +.+|..|+|.|.....++.++...+++..|+.|.| .|.+.+++.+.+.++|.||+|+++|++
T Consensus 163 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~ 242 (386)
T PRK14289 163 TGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQ 242 (386)
T ss_pred CCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCCE
Confidence 43 56899999999998888888766677899999987 599999999999999999999999999
Q ss_pred EecCC-------CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 214 VFGGG-------WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 214 I~g~G-------~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
|...| +..+||++|..+.......+++..|++.
T Consensus 243 i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~ 282 (386)
T PRK14289 243 LSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIY 282 (386)
T ss_pred EEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeE
Confidence 97554 2357899998855444344455556665
No 27
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.96 E-value=2.7e-30 Score=247.46 Aligned_cols=203 Identities=21% Similarity=0.280 Sum_probs=145.2
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHhhccccccccccc----ccccccc---
Q 022733 40 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDA----SIGQMRF--- 110 (293)
Q Consensus 40 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~--~~~~~~~i~~Ay~vL~d~~~R~~YD~----~~~~~~~--- 110 (293)
..|||+||||+++||.+|||+|||+|+++||||+++.. ++++|++|++||++|+||.+|..||+ ++.....
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~~ 87 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPGP 87 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccCC
Confidence 46999999999999999999999999999999998743 67899999999999999999999998 5532110
Q ss_pred ------cccc---ccCC---------CC------CCCCC-------CCCCCCCccccc-----------------cccCc
Q 022733 111 ------HFGT---NASA---------GF------SRSSW-------KGPPRPEALFVD-----------------ENACI 142 (293)
Q Consensus 111 ------~~~~---~~~~---------~~------~~~~~-------~gp~r~~difvd-----------------~~~Ci 142 (293)
+|+. ..|+ ++ .|+.+ ..+.++.|+.+. ...-+
T Consensus 88 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~~r~~ 167 (389)
T PRK14295 88 GGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLTSQA 167 (389)
T ss_pred CCCCCCCCCcccccccccccccccccccccchhhhhcccccCCCCCCCCCCCCCEEEEEEEEHHHHhCCceEEEEeeccc
Confidence 0100 0000 00 01111 112344555432 12344
Q ss_pred CCCCCcccc------cceeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCC
Q 022733 143 GCRECVHHA------SNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQP 206 (293)
Q Consensus 143 gC~~C~~~a------p~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~ 206 (293)
.|..|.+.+ +.+|..|.|.|...... +.+ +++.+|+.|.| .|.+.+++.+.+.|+|.||+
T Consensus 168 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~--g~~--~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~ 243 (389)
T PRK14295 168 PCPACSGTGAKNGTTPRVCPTCSGTGQVSRNS--GGF--SLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPA 243 (389)
T ss_pred cCCCCcccccCCCCCCcCCCCCCCEeEEEEEe--cce--EEEEecCCCcceeEEeccCCCCCCCCceEeeeeEEEEEeCC
Confidence 566666543 57899999999765543 433 47789999988 68889999999999999999
Q ss_pred CCCCCcEEecCC-------CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 207 QPKKGYGVFGGG-------WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 207 G~~~G~~I~g~G-------~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
|+++|++|...| ++.+|||++..+......++++.+||+-
T Consensus 244 G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~ 290 (389)
T PRK14295 244 GVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTV 290 (389)
T ss_pred CCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEE
Confidence 999999996554 2456899998866555555566666665
No 28
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.96 E-value=7e-30 Score=243.57 Aligned_cols=207 Identities=24% Similarity=0.307 Sum_probs=150.3
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhccccccccccccccccc------ccc
Q 022733 40 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMR------FHF 112 (293)
Q Consensus 40 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~------~~~ 112 (293)
+.|||+||||+++||.+|||+|||+|+++||||++++. +.++|+.|++||++|+||.+|..||.++.... ..+
T Consensus 1 ~~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~~~ 80 (371)
T PRK14292 1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPF 80 (371)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCccc
Confidence 46999999999999999999999999999999999754 56899999999999999999999999874321 001
Q ss_pred cc----------ccCCCCCC--CCC-CCCCCCCccccc-----------------cccCcCCCCCcccc-------ccee
Q 022733 113 GT----------NASAGFSR--SSW-KGPPRPEALFVD-----------------ENACIGCRECVHHA-------SNTF 155 (293)
Q Consensus 113 ~~----------~~~~~~~~--~~~-~gp~r~~difvd-----------------~~~CigC~~C~~~a-------p~tf 155 (293)
++ .+|++.++ ..+ .++.++.++... ....+.|..|.++. +.+|
T Consensus 81 ~~~~~d~~d~f~~~fg~~~~~~~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~C 160 (371)
T PRK14292 81 GGMGFDPMDIFEQLFGGAGFGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTC 160 (371)
T ss_pred CccCCChHHHHHHhhCCCCcCCCCCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCCccC
Confidence 10 01121110 001 123344455432 22455677776543 5689
Q ss_pred eeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCCCC-----
Q 022733 156 VMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGGWE----- 220 (293)
Q Consensus 156 ~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G~~----- 220 (293)
..|.|.|..+...+..+...+++..|..|.| .|.|.+.+.+.+.++|.||+|+.+|++|...|.+
T Consensus 161 ~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~~ 240 (371)
T PRK14292 161 PTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNEGPG 240 (371)
T ss_pred CCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEEecCcCCCCC
Confidence 9999999888777666655566889999987 6899999999999999999999999999655421
Q ss_pred CCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 221 RPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 221 ~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
..+|+|+..+.......+++.+|++.
T Consensus 241 ~~GDL~v~i~v~~h~~f~r~g~dL~~ 266 (371)
T PRK14292 241 GNGDLYVHIEMEPHPELRREQEHLIY 266 (371)
T ss_pred CCCCEEEEEEEecCCccccchhceeE
Confidence 23899998855443344455556665
No 29
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.96 E-value=9.8e-30 Score=242.71 Aligned_cols=206 Identities=23% Similarity=0.300 Sum_probs=150.6
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhcccccccccccccccccc---ccc---
Q 022733 41 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF---HFG--- 113 (293)
Q Consensus 41 ~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~---~~~--- 113 (293)
.|||+||||+++||.+|||+|||+|+++||||++++. ++++|+.|++||++|+||.+|..||.++..... +++
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~~~~~~~ 82 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGFPDMG 82 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCCCcCCcc
Confidence 5999999999999999999999999999999998754 668999999999999999999999998743110 010
Q ss_pred ---------cccCCCCCC-C------CCCCCCCCCccccc-----------------cccCcCCCCCccc------ccce
Q 022733 114 ---------TNASAGFSR-S------SWKGPPRPEALFVD-----------------ENACIGCRECVHH------ASNT 154 (293)
Q Consensus 114 ---------~~~~~~~~~-~------~~~gp~r~~difvd-----------------~~~CigC~~C~~~------ap~t 154 (293)
..+|++++. . ...++.++.++.+. ....+.|..|.+. .+.+
T Consensus 83 ~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~ 162 (374)
T PRK14293 83 DMGGFADIFETFFSGFGGAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTT 162 (374)
T ss_pred cccchHHHHHHHhcccCCCCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCCCCee
Confidence 011211000 0 01123344455432 1234556666553 3568
Q ss_pred eeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCCC-----
Q 022733 155 FVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGGW----- 219 (293)
Q Consensus 155 f~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G~----- 219 (293)
|..|.|.|..+...+.++...+.+..|+.|.| .|.+.+++.+.+.++|.||||+++|++|...|.
T Consensus 163 C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~G~~~~ 242 (374)
T PRK14293 163 CSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDAGL 242 (374)
T ss_pred CCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccCccCCC
Confidence 99999999988888888766666789999987 688899999999999999999999999975542
Q ss_pred --CCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 220 --ERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 220 --~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
..+||+++..+.......++++.|++-
T Consensus 243 ~~~~~GDL~v~v~v~~~~~f~r~g~DL~~ 271 (374)
T PRK14293 243 RGGPPGDLYVYLFVKNDPEFRRDGINILS 271 (374)
T ss_pred CCCCCcCEEEEEEEeCCCccChhhhceEE
Confidence 346899988865554444455555554
No 30
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.96 E-value=8.1e-30 Score=243.06 Aligned_cols=202 Identities=22% Similarity=0.293 Sum_probs=144.7
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhcccccccccccccccccc---------
Q 022733 41 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF--------- 110 (293)
Q Consensus 41 ~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~--------- 110 (293)
.|||+||||+++||.+|||+|||+|+++||||++++. ++++|++|++||++|+||.+|..||.++.....
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~~g 82 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGGG 82 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccccCCCC
Confidence 6999999999999999999999999999999998643 567999999999999999999999998743211
Q ss_pred ---ccccc-------cCCCC-CC-C--CC-CCCCCCCccccc-----------------cccCcCCCCCcccc------c
Q 022733 111 ---HFGTN-------ASAGF-SR-S--SW-KGPPRPEALFVD-----------------ENACIGCRECVHHA------S 152 (293)
Q Consensus 111 ---~~~~~-------~~~~~-~~-~--~~-~gp~r~~difvd-----------------~~~CigC~~C~~~a------p 152 (293)
+|+.+ +|++. +. . .+ ..+.++.++.+. ..+-+.|..|.+.. +
T Consensus 83 ~~~~~~~~~~~~f~~~f~~~~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~~~~~ 162 (372)
T PRK14300 83 NHGGFHPDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETV 162 (372)
T ss_pred CCCccccchhhhHHHHHHhhcCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcccCCCCCC
Confidence 00000 01000 00 0 01 112345555533 22345666776653 5
Q ss_pred ceeeeeCCcceEEEEEecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCC----
Q 022733 153 NTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGG---- 218 (293)
Q Consensus 153 ~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G---- 218 (293)
.+|..|.|.|..+.. .|. .+++.+|+.|.| .|.+.+.+.+.+.++|.||||+++|++|...|
T Consensus 163 ~~C~~C~G~G~~~~~--~g~--~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~ 238 (372)
T PRK14300 163 TTCDACSGVGATRMQ--QGF--FTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGEA 238 (372)
T ss_pred ccCCCccCeEEEEEe--ece--EEEEEeCCCCCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEeccccC
Confidence 689999999976542 342 347779999987 69999999999999999999999999997554
Q ss_pred ---CCCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 219 ---WERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 219 ---~~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
++.|+||++..+......++++..|++-
T Consensus 239 ~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~ 269 (372)
T PRK14300 239 GIRGGNSGDLYVDIAIKPHDIYKVDGANLHC 269 (372)
T ss_pred CCCCCCCCCEEEEEEECCCCCeEEecCCEEE
Confidence 2357899998855444444455656654
No 31
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=1.8e-26 Score=211.40 Aligned_cols=203 Identities=24% Similarity=0.225 Sum_probs=127.4
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHhhcccccccccccccccccccccc
Q 022733 37 ASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFGT 114 (293)
Q Consensus 37 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~--~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~ 114 (293)
..+.+|||+||||+++||..|||+|||+||++||||+|+++ +++.|+.|+.||+||+||++|+.||.+|.......+.
T Consensus 12 v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~ 91 (336)
T KOG0713|consen 12 VLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENK 91 (336)
T ss_pred hhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhccccc
Confidence 35678999999999999999999999999999999999875 6789999999999999999999999998544331110
Q ss_pred -------------ccCCCCCC---CCC--CCCCCCCccccccccCcCCCCCcccccc--------ee-----eeeCCcce
Q 022733 115 -------------NASAGFSR---SSW--KGPPRPEALFVDENACIGCRECVHHASN--------TF-----VMDEATGC 163 (293)
Q Consensus 115 -------------~~~~~~~~---~~~--~gp~r~~difvd~~~CigC~~C~~~ap~--------tf-----~~c~g~G~ 163 (293)
.+|+..|+ ... ...+.+.++.++.+.|. ..|....+. .+ ..|.+ -.
T Consensus 92 ~~~~g~~~~~~f~~~f~dfg~~~~g~~~~e~~~~g~~V~~~~e~~~--~h~y~~~~~e~~r~~~v~~~~~g~~~~~~-~~ 168 (336)
T KOG0713|consen 92 DGEGGGGGNDIFSAFFGDFGVTVGGNPLEEALPKGSDVSSDLEKQL--EHFYMGNFVEEVREKGVYKPAPGTRKCNC-RL 168 (336)
T ss_pred ccccCCcccchHHHhhcccccccCCCcccCCCCCCceEEeehhhch--hhhhcccHHHHHhccCceeecCcccccCC-hh
Confidence 11111111 000 11223334433333332 222221110 00 01111 11
Q ss_pred EEEEEecCc-cccee-cccccCCCcceeeeeeecccceEEEEeCCCCCCCcEE--ecCC----CCCCCceehhhHHHHHH
Q 022733 164 ARVKVQYGD-SDQNI-EVSVDSCPVNCIHWVDREELPVLEFLIQPQPKKGYGV--FGGG----WERPANVFMAAKAFNKQ 235 (293)
Q Consensus 164 ~~v~~q~g~-~~~~i-q~ac~~Cpg~Cig~~~~~e~k~LeV~Ip~G~~~G~~I--~g~G----~~~~~~vf~~~~~~~~~ 235 (293)
.++.++.++ ..+++ +..|..||+ .+..-+...+++.+..|+.+|..+ .+.| .+.|||+++-..+...-
T Consensus 169 ~~~~~~~~~g~~~~~q~~~~~~~~~----~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~gD~~f~~~~y~~~ 244 (336)
T KOG0713|consen 169 EMFTQQEGPGRFQMLQEAVCDECPN----VKLVLEEDPLEVEFERGDADGPEEIFELEGEPHIDGVPGDLFFKIVSYTHP 244 (336)
T ss_pred hheeeccCCChhhhhhhhhhccCCc----cceeecCCceeeeeeecccCCceeeeeccCCcceecccCCceeeeEEeccc
Confidence 223334343 22333 455999999 445566778999999999999987 3444 46788887777554444
Q ss_pred HHHHhhCCCCC
Q 022733 236 LQQQAAGGSNP 246 (293)
Q Consensus 236 ~~~~~~~~~~~ 246 (293)
++.++..|++.
T Consensus 245 ~~~~k~~~~~~ 255 (336)
T KOG0713|consen 245 RFERKGDDLYT 255 (336)
T ss_pred ceecCccchhh
Confidence 44444444444
No 32
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=2.4e-24 Score=198.34 Aligned_cols=206 Identities=20% Similarity=0.226 Sum_probs=140.9
Q ss_pred CCCCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhccccccccccccccccccccc
Q 022733 35 ERASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFG 113 (293)
Q Consensus 35 ~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~ 113 (293)
.......|||+||||+++|+..|||.||++|+|+||||.+.++ +.++|++|.+|||+|+|+++|..||..+.....+++
T Consensus 37 s~~~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~~~~~ 116 (288)
T KOG0715|consen 37 SRIISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQHGEFG 116 (288)
T ss_pred cccCCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcccccc
Confidence 4445555999999999999999999999999999999999765 678999999999999999999999998754311111
Q ss_pred -------cccCCC-CC--CC------CCCCC----CCCCccccc---cccCcCCC---CCcccccceeeeeCCcceEEEE
Q 022733 114 -------TNASAG-FS--RS------SWKGP----PRPEALFVD---ENACIGCR---ECVHHASNTFVMDEATGCARVK 167 (293)
Q Consensus 114 -------~~~~~~-~~--~~------~~~gp----~r~~difvd---~~~CigC~---~C~~~ap~tf~~c~g~G~~~v~ 167 (293)
...|++ .- .. .+... .++..--+. .+.|.+|. .-.+.....|..|.+.|.....
T Consensus 117 g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (288)
T KOG0715|consen 117 GNPFDVFLEFFGGKMNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSGAEEGAKRESCKTCSGRGLVSNP 196 (288)
T ss_pred CCccchHHHhhcccccccccCcccccccccCHHHHhhccccceEEEeecccccccCcCcccccccccchhhhCccccccc
Confidence 011111 00 00 00000 000000011 12333332 2223445689999998865544
Q ss_pred EecCcccceecccccCCCc----------ceeeeeeecccceEEEEeCCCCCCCcEEecCCCCCCCceehhhHHHHHHHH
Q 022733 168 VQYGDSDQNIEVSVDSCPV----------NCIHWVDREELPVLEFLIQPQPKKGYGVFGGGWERPANVFMAAKAFNKQLQ 237 (293)
Q Consensus 168 ~q~g~~~~~iq~ac~~Cpg----------~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G~~~~~~vf~~~~~~~~~~~ 237 (293)
.+..+... +|..|.+ .|++.+.+...+.+.+.+|+|..++.+|...|.+.. +|||...+-....+
T Consensus 197 ~~~~f~~~----~~~~c~~~~~~~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~~~~~-~l~v~~~v~~~~~~ 271 (288)
T KOG0715|consen 197 KEDPFILY----TCSYCLGRGLVLRDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAGHGND-DLFVRLIVAKSPSF 271 (288)
T ss_pred ccCCccee----ecccccccceeccchHHHhhcchhhhhheeEEeecCcccccccEEEEecCCcc-eEEEEEEeccCccc
Confidence 44433222 7887765 588888889999999999999999999987765433 99999988777777
Q ss_pred HHhhCCCC
Q 022733 238 QQAAGGSN 245 (293)
Q Consensus 238 ~~~~~~~~ 245 (293)
+++..+.+
T Consensus 272 ~r~~~~i~ 279 (288)
T KOG0715|consen 272 RREGKDIL 279 (288)
T ss_pred ccccCccc
Confidence 76654444
No 33
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.88 E-value=2.4e-23 Score=192.57 Aligned_cols=193 Identities=22% Similarity=0.283 Sum_probs=113.5
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhcccccccccccccccccc-ccccccC
Q 022733 40 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF-HFGTNAS 117 (293)
Q Consensus 40 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~-~~~~~~~ 117 (293)
..|||+||||+++||.+|||+|||+|+++||||++++. ++++|++|++||++|+||.+|..||.++..... ++.....
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~~ 82 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP 82 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCCC
Confidence 57999999999999999999999999999999999753 668999999999999999999999998754211 1110000
Q ss_pred CCCCCCCCCCC--CCCCccccccccCcCCCCCcccccceeeeeCCcceEEEEEecC-cc----cceecccccCCCcceee
Q 022733 118 AGFSRSSWKGP--PRPEALFVDENACIGCRECVHHASNTFVMDEATGCARVKVQYG-DS----DQNIEVSVDSCPVNCIH 190 (293)
Q Consensus 118 ~~~~~~~~~gp--~r~~difvd~~~CigC~~C~~~ap~tf~~c~g~G~~~v~~q~g-~~----~~~iq~ac~~Cpg~Cig 190 (293)
++.+...|.+. ....++|-... -+.+.-.+ ....+. ..+. ....| +. ...+.+++..|..
T Consensus 83 ~~~~~~~~~~~~~~~~~d~f~~~f--gg~~~~~~-~g~~~~---~~~~---~~~~g~dl~~~l~isL~ea~~G~~~---- 149 (291)
T PRK14299 83 GPPGGGDFSGFNVGDFSDFFQQLF--GGRGGFGG-FGDLFG---SVGR---RARKGRDLEAELPLTLEEAYRGGEK---- 149 (291)
T ss_pred CCCCCCCccccCcCCHHHHHHHHh--CCCCCCCC-cccccc---cccC---CCCCCCCEEEEEEecHHHHhCCCeE----
Confidence 00010111110 01113332211 01100000 000000 0000 00111 11 1123344544443
Q ss_pred eeeecccceEEEEeCCCCCCCcEEecCCCCC-CCceehhhHHHHHHHHHHhhCCCCC
Q 022733 191 WVDREELPVLEFLIQPQPKKGYGVFGGGWER-PANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 191 ~~~~~e~k~LeV~Ip~G~~~G~~I~g~G~~~-~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
.... ..+.++|.||||+++|++|...|.+. .||+++..........+++..|++-
T Consensus 150 ~i~l-~g~~~~V~Ip~G~~~G~~ir~~g~G~~~GDL~v~i~v~~h~~f~R~G~DL~~ 205 (291)
T PRK14299 150 VVEV-AGERLSVRIPPGVREGQVIRLAGKGRQGGDLYLVVRLLPHPVFRLEGDDLYA 205 (291)
T ss_pred EEee-CCEEEEEecCCCcCCCcEEEECCCCCCCCCEEEEEEEcCCCCeEEECCEEEE
Confidence 2222 23578999999999999997666433 3899998866555555666666665
No 34
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.87 E-value=1.1e-22 Score=189.44 Aligned_cols=67 Identities=34% Similarity=0.605 Sum_probs=62.2
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhcccccccccccccc
Q 022733 40 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIG 106 (293)
Q Consensus 40 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~ 106 (293)
..|||+||||+++||.+|||+|||+|+++||||++++. ++++|++|++||++|+||.+|..||.++.
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~ 70 (306)
T PRK10266 3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQ 70 (306)
T ss_pred cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhc
Confidence 46999999999999999999999999999999998654 67899999999999999999999999763
No 35
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=1.7e-18 Score=154.56 Aligned_cols=72 Identities=35% Similarity=0.508 Sum_probs=66.5
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHhhcccccccccccccccc
Q 022733 37 ASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDASIGQM 108 (293)
Q Consensus 37 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~--~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~ 108 (293)
.....|+|+||||+++|+.++||++||+|+++||||++++. +.++|++||+||+||+||.+|..||.+++..
T Consensus 27 ~~~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~ 100 (279)
T KOG0716|consen 27 DVIRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELG 100 (279)
T ss_pred ccchhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHH
Confidence 34478999999999999999999999999999999999874 7889999999999999999999999997644
No 36
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.69 E-value=1.3e-17 Score=119.81 Aligned_cols=61 Identities=44% Similarity=0.769 Sum_probs=57.0
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc---hHHHHHHHHHHHHhhcccccccccc
Q 022733 42 NYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK---GHEHTLLLNEAYKVLMRGDLRKDYD 102 (293)
Q Consensus 42 d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~---~~~~~~~i~~Ay~vL~d~~~R~~YD 102 (293)
|||+||||+++++.++||++|+++++++|||+++.. +.+.|..|++||++|+||.+|..||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 689999999999999999999999999999997654 3579999999999999999999998
No 37
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.69 E-value=1.1e-17 Score=158.38 Aligned_cols=73 Identities=40% Similarity=0.618 Sum_probs=66.5
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc---hHHHHHHHHHHHHhhccccccccccccccccc
Q 022733 37 ASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK---GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMR 109 (293)
Q Consensus 37 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~---~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 109 (293)
+..++.||+||||..+|+..+||++||+|||+||||+||+. +.+.|+.|+.||+|||||..|..||.+..+..
T Consensus 4 ~~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil 79 (508)
T KOG0717|consen 4 PFKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQIL 79 (508)
T ss_pred chhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHh
Confidence 45678999999999999999999999999999999999875 55799999999999999999999999876543
No 38
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=7.7e-17 Score=148.06 Aligned_cols=69 Identities=41% Similarity=0.596 Sum_probs=64.6
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHhhcccccccccccccccc
Q 022733 40 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDASIGQM 108 (293)
Q Consensus 40 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~--~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~ 108 (293)
..|||+||||+++|+..||++||+..+++||||+||++ +.+.|+.|.+||+||+|+.+|..||..+...
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~ 74 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSG 74 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhc
Confidence 57999999999999999999999999999999999865 6789999999999999999999999998543
No 39
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.63 E-value=1.5e-16 Score=150.86 Aligned_cols=71 Identities=32% Similarity=0.464 Sum_probs=64.3
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-----hHHHHHHHHHHHHhhcccccccccccccccc
Q 022733 38 SKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-----GHEHTLLLNEAYKVLMRGDLRKDYDASIGQM 108 (293)
Q Consensus 38 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-----~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~ 108 (293)
..+.|||.+|||+++||.+|||+|||++++.||||+..++ +++.|+.|.+|||||+||.+|.+||.+|.+.
T Consensus 6 ~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qG 81 (546)
T KOG0718|consen 6 LDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQG 81 (546)
T ss_pred cchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcc
Confidence 4456999999999999999999999999999999998643 5679999999999999999999999998553
No 40
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.62 E-value=3.2e-16 Score=159.96 Aligned_cols=71 Identities=32% Similarity=0.434 Sum_probs=65.0
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhcccccccccccccccc
Q 022733 38 SKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIGQM 108 (293)
Q Consensus 38 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~ 108 (293)
....+||+||||+++||..+||+|||+||++||||+++.. +.++|+.|++||+||+||.+|..||.+|...
T Consensus 570 ~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~G 641 (1136)
T PTZ00341 570 IPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDG 641 (1136)
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccccc
Confidence 4568999999999999999999999999999999999754 5679999999999999999999999987543
No 41
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.61 E-value=1.1e-15 Score=108.06 Aligned_cols=57 Identities=47% Similarity=0.707 Sum_probs=52.0
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC---chHHHHHHHHHHHHhhccccc
Q 022733 41 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ---KGHEHTLLLNEAYKVLMRGDL 97 (293)
Q Consensus 41 ~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~---~~~~~~~~i~~Ay~vL~d~~~ 97 (293)
.|||+||||+++++.++||++|+++++++|||+++. .+.+.|..|++||++|+||.+
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~ 60 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999999999974 256799999999999999853
No 42
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.61 E-value=3.8e-16 Score=136.63 Aligned_cols=71 Identities=35% Similarity=0.539 Sum_probs=63.7
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc----hHHHHHHHHHHHHhhcccccccccccccccc
Q 022733 38 SKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK----GHEHTLLLNEAYKVLMRGDLRKDYDASIGQM 108 (293)
Q Consensus 38 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~----~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~ 108 (293)
...+|+|+||||..+|+..+|++||++|++++|||++++. +.+.|+.|+.||.||+|.++|+.||..|.-.
T Consensus 11 f~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~id 85 (264)
T KOG0719|consen 11 FNKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSID 85 (264)
T ss_pred ccccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCC
Confidence 3445999999999999999999999999999999999643 4579999999999999999999999987543
No 43
>PHA03102 Small T antigen; Reviewed
Probab=99.59 E-value=4.6e-16 Score=130.24 Aligned_cols=66 Identities=26% Similarity=0.300 Sum_probs=60.9
Q ss_pred cCcccccCCCCCC--CHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHhhcccccccccccccccc
Q 022733 41 KNYYELLGVSVEA--NGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRGDLRKDYDASIGQM 108 (293)
Q Consensus 41 ~d~Y~iLgv~~~a--s~~eIk~ayr~l~~~~HPD~~~~~~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~ 108 (293)
..+|+||||+++| |..+||+|||++++++|||++++ .+.|++||+||++|+|+.+|..||.++...
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~--~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~ 72 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD--EEKMKELNTLYKKFRESVKSLRDLDGEEDS 72 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch--hHHHHHHHHHHHHHhhHHHhccccccCCcc
Confidence 4689999999999 99999999999999999999754 479999999999999999999999988654
No 44
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.59 E-value=1.9e-15 Score=105.03 Aligned_cols=53 Identities=49% Similarity=0.806 Sum_probs=49.6
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC--chHHHHHHHHHHHHhhcc
Q 022733 42 NYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMR 94 (293)
Q Consensus 42 d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~--~~~~~~~~i~~Ay~vL~d 94 (293)
|||+||||+++++.++||++|+++++++|||+++. .+.+.|..|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 69999999999999999999999999999999975 367899999999999986
No 45
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.57 E-value=2.1e-15 Score=130.86 Aligned_cols=74 Identities=32% Similarity=0.495 Sum_probs=66.6
Q ss_pred CCCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHhhccccccccccccccccc
Q 022733 36 RASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMR 109 (293)
Q Consensus 36 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~--~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 109 (293)
......|+||||||++++|..|||+|||+|++++|||+++++ .++.|..|++||+.|+|+..|..|..++...+
T Consensus 94 ~~~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDG 169 (230)
T KOG0721|consen 94 RERQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDG 169 (230)
T ss_pred HHhhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCC
Confidence 446678999999999999999999999999999999998763 56788999999999999999999999986654
No 46
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=1.5e-14 Score=125.96 Aligned_cols=68 Identities=44% Similarity=0.637 Sum_probs=62.6
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc---hHHHHHHHHHHHHhhccccccccccccc
Q 022733 38 SKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK---GHEHTLLLNEAYKVLMRGDLRKDYDASI 105 (293)
Q Consensus 38 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~---~~~~~~~i~~Ay~vL~d~~~R~~YD~~~ 105 (293)
....+||+||||+++|+..|||++||+++++||||+++.. +.+.|..|++||++|+|+..|..||..+
T Consensus 3 ~~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~ 73 (237)
T COG2214 3 SDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG 73 (237)
T ss_pred hhhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence 3467999999999999999999999999999999999864 4589999999999999999999999863
No 47
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.48 E-value=2.4e-14 Score=143.57 Aligned_cols=66 Identities=42% Similarity=0.624 Sum_probs=61.2
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhcccccccccccccc
Q 022733 41 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIG 106 (293)
Q Consensus 41 ~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~ 106 (293)
.|||+||||+++|+..+||++||+|+++||||+++.. +.++|+.|++||++|+||.+|..||.++.
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~ 68 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGH 68 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhcc
Confidence 5999999999999999999999999999999998753 45689999999999999999999999864
No 48
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.48 E-value=3.5e-14 Score=131.23 Aligned_cols=71 Identities=35% Similarity=0.582 Sum_probs=64.2
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-----hHHHHHHHHHHHHhhccccccccccccccc
Q 022733 37 ASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-----GHEHTLLLNEAYKVLMRGDLRKDYDASIGQ 107 (293)
Q Consensus 37 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-----~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~ 107 (293)
.+..+|||+||||.++|+..||.+|||+++.+||||...++ ++++|..|-.|-+||+||++|+.||..-.+
T Consensus 390 qs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnGeDP 465 (504)
T KOG0624|consen 390 QSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNGEDP 465 (504)
T ss_pred HhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCCCCC
Confidence 35678999999999999999999999999999999998654 567899999999999999999999997644
No 49
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.43 E-value=1.4e-13 Score=118.01 Aligned_cols=65 Identities=26% Similarity=0.528 Sum_probs=57.2
Q ss_pred cCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCc-------hHHHHHHHHHHHHhhccccccccccccc
Q 022733 41 KNYYELLGVSVE--ANGQEIKEAYRKLQKKYHPDIAGQK-------GHEHTLLLNEAYKVLMRGDLRKDYDASI 105 (293)
Q Consensus 41 ~d~Y~iLgv~~~--as~~eIk~ayr~l~~~~HPD~~~~~-------~~~~~~~i~~Ay~vL~d~~~R~~YD~~~ 105 (293)
.|||+||||++. ++..+|+++|+++++++|||+.... +.+.+..||+||++|+||.+|..|+..+
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~l 74 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLSL 74 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHHh
Confidence 489999999996 6889999999999999999997543 2347889999999999999999999764
No 50
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.42 E-value=1.3e-13 Score=117.54 Aligned_cols=65 Identities=32% Similarity=0.469 Sum_probs=57.3
Q ss_pred cCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCchH-----HHHHHHHHHHHhhccccccccccccc
Q 022733 41 KNYYELLGVSVE--ANGQEIKEAYRKLQKKYHPDIAGQKGH-----EHTLLLNEAYKVLMRGDLRKDYDASI 105 (293)
Q Consensus 41 ~d~Y~iLgv~~~--as~~eIk~ayr~l~~~~HPD~~~~~~~-----~~~~~i~~Ay~vL~d~~~R~~YD~~~ 105 (293)
.|||++|||++. ++..+|+++|+++++++|||++..... ..+..||+||++|+||.+|..|+..+
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l 73 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLL 73 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence 589999999997 789999999999999999999864322 34679999999999999999998875
No 51
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.40 E-value=3.1e-13 Score=107.79 Aligned_cols=59 Identities=31% Similarity=0.418 Sum_probs=52.9
Q ss_pred CCCCCCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHhhc
Q 022733 33 AGERASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLM 93 (293)
Q Consensus 33 ~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~~~~~~~~i~~Ay~vL~ 93 (293)
...+.++..++|+||||++++|.+|||++||+|++++|||+++ +.+.+.+|++||++|.
T Consensus 57 ~f~~~Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG--s~~~~~kIneAyevL~ 115 (116)
T PTZ00100 57 GFENPMSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG--STYIASKVNEAKDLLL 115 (116)
T ss_pred cccCCCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CHHHHHHHHHHHHHHh
Confidence 4566778899999999999999999999999999999999964 4578899999999995
No 52
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.37 E-value=6.8e-13 Score=113.78 Aligned_cols=69 Identities=23% Similarity=0.355 Sum_probs=60.1
Q ss_pred CCccCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCc-------hHHHHHHHHHHHHhhcccccccccccccc
Q 022733 38 SKKKNYYELLGVSVE--ANGQEIKEAYRKLQKKYHPDIAGQK-------GHEHTLLLNEAYKVLMRGDLRKDYDASIG 106 (293)
Q Consensus 38 ~~~~d~Y~iLgv~~~--as~~eIk~ayr~l~~~~HPD~~~~~-------~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~ 106 (293)
+...+||++|||++. .+..+|+++||++++++|||+.... +.+.+..||+||++|+||.+|..|+..+.
T Consensus 1 ~~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l~ 78 (173)
T PRK00294 1 MGTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLALS 78 (173)
T ss_pred CCCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 356799999999999 5689999999999999999998543 23478899999999999999999998753
No 53
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.36 E-value=8.2e-13 Score=113.65 Aligned_cols=66 Identities=27% Similarity=0.432 Sum_probs=57.1
Q ss_pred ccCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCch-------HHHHHHHHHHHHhhccccccccccccc
Q 022733 40 KKNYYELLGVSVE--ANGQEIKEAYRKLQKKYHPDIAGQKG-------HEHTLLLNEAYKVLMRGDLRKDYDASI 105 (293)
Q Consensus 40 ~~d~Y~iLgv~~~--as~~eIk~ayr~l~~~~HPD~~~~~~-------~~~~~~i~~Ay~vL~d~~~R~~YD~~~ 105 (293)
..|||+||||++. ++..+|+++|++|++++|||++.... .+.+..||+||++|+||.+|..|+..+
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l 79 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHL 79 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHh
Confidence 4699999999996 68999999999999999999986432 224579999999999999999999764
No 54
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.32 E-value=8.3e-13 Score=125.56 Aligned_cols=70 Identities=26% Similarity=0.369 Sum_probs=64.9
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhccccccccccccccc
Q 022733 38 SKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIGQ 107 (293)
Q Consensus 38 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~ 107 (293)
.+..|+|.+|||+++++.++||+.||++|...|||||..+ +++.|+.|+.||++|+|+++|..||.....
T Consensus 232 ~~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~k 302 (490)
T KOG0720|consen 232 LNILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDLELKK 302 (490)
T ss_pred hcCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHHHHHH
Confidence 4578999999999999999999999999999999999765 678999999999999999999999998754
No 55
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.26 E-value=1.8e-12 Score=115.07 Aligned_cols=67 Identities=34% Similarity=0.607 Sum_probs=61.8
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHhhcccccccccccccccc
Q 022733 42 NYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIGQM 108 (293)
Q Consensus 42 d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~ 108 (293)
|.|+||||+.+++..||.+|||+|++++|||+++++ +.+.|+.|-.||++|.|.+.|..||-...-.
T Consensus 34 nCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydyaldhp 101 (329)
T KOG0722|consen 34 NCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYALDHP 101 (329)
T ss_pred hHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHHhcCc
Confidence 999999999999999999999999999999999764 5579999999999999999999999876544
No 56
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.24 E-value=5.3e-12 Score=108.33 Aligned_cols=81 Identities=26% Similarity=0.479 Sum_probs=74.2
Q ss_pred hhhhhhhhhhcccCCCCCCcccceeccCCCCCCCCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc---hHH
Q 022733 4 AMVLSYHHVSGYVNPNKSSLSVIRCCNGRAGERASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK---GHE 80 (293)
Q Consensus 4 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~---~~~ 80 (293)
++|.|-++|..|++|+.+.++. ++|+||.|.|+.+.++||+.||+|++..|||+|+++ ++.
T Consensus 32 ~vLts~~qIeRllrpgstyfnL----------------NpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqk 95 (250)
T KOG1150|consen 32 SVLTSKQQIERLLRPGSTYFNL----------------NPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQK 95 (250)
T ss_pred cccCcHHHHHHHhcCCcccccc----------------ChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHH
Confidence 5788999999999999999887 999999999999999999999999999999999876 567
Q ss_pred HHHHHHHHHHhhcccccccc
Q 022733 81 HTLLLNEAYKVLMRGDLRKD 100 (293)
Q Consensus 81 ~~~~i~~Ay~vL~d~~~R~~ 100 (293)
.|..|..||.+|-|+..|..
T Consensus 96 AFdivkKA~k~l~n~~~rkr 115 (250)
T KOG1150|consen 96 AFDIVKKAYKLLENDKIRKR 115 (250)
T ss_pred HHHHHHHHHHHHhCHHHHHH
Confidence 89999999999999886654
No 57
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.23 E-value=4.5e-12 Score=115.35 Aligned_cols=67 Identities=40% Similarity=0.600 Sum_probs=61.8
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc---hHHHHHHHHHHHHhhcccccccccccccc
Q 022733 40 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK---GHEHTLLLNEAYKVLMRGDLRKDYDASIG 106 (293)
Q Consensus 40 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~---~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~ 106 (293)
..|||.+|+|.++|+..+|++||+++++++|||+++.. ++++|++|.+||++|+|+.+|..||.++.
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~ 71 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGE 71 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCc
Confidence 46999999999999999999999999999999998766 44579999999999999999999999986
No 58
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.22 E-value=5.5e-12 Score=118.96 Aligned_cols=71 Identities=35% Similarity=0.549 Sum_probs=64.1
Q ss_pred CCCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC---chHHHHHHHHHHHHhhcccccccccccccc
Q 022733 36 RASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ---KGHEHTLLLNEAYKVLMRGDLRKDYDASIG 106 (293)
Q Consensus 36 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~---~~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~ 106 (293)
+.++..|||.||||..+++..|||+|||++++.+|||++.. +++.+|+.+.+||.+|+||.+|..||....
T Consensus 368 kkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~d 441 (486)
T KOG0550|consen 368 KKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQD 441 (486)
T ss_pred HHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccccc
Confidence 34668999999999999999999999999999999999853 356799999999999999999999998653
No 59
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.22 E-value=1.3e-11 Score=112.91 Aligned_cols=58 Identities=34% Similarity=0.540 Sum_probs=51.0
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC---------chHHHHHHHHHHHHhhcc
Q 022733 37 ASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ---------KGHEHTLLLNEAYKVLMR 94 (293)
Q Consensus 37 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~---------~~~~~~~~i~~Ay~vL~d 94 (293)
.+...++|+||||++++|.+|||++||+|+++||||+... .+.++|++|++||++|+.
T Consensus 196 ~~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 196 GPTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred CCcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 3556899999999999999999999999999999999632 145799999999999985
No 60
>PHA02624 large T antigen; Provisional
Probab=99.17 E-value=1.8e-11 Score=121.70 Aligned_cols=60 Identities=35% Similarity=0.507 Sum_probs=55.9
Q ss_pred ccCcccccCCCCCC--CHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHhhccccccccc
Q 022733 40 KKNYYELLGVSVEA--NGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRGDLRKDY 101 (293)
Q Consensus 40 ~~d~Y~iLgv~~~a--s~~eIk~ayr~l~~~~HPD~~~~~~~~~~~~i~~Ay~vL~d~~~R~~Y 101 (293)
..++|++|||+++| +..+||+|||+++++||||++++ ++.|++|++||++|+|+.+|..|
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd--eekfk~Ln~AYevL~d~~k~~r~ 71 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD--EEKMKRLNSLYKKLQEGVKSARQ 71 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc--HHHHHHHHHHHHHHhcHHHhhhc
Confidence 45899999999999 99999999999999999999754 58999999999999999999888
No 61
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.07 E-value=1.6e-10 Score=99.17 Aligned_cols=67 Identities=24% Similarity=0.365 Sum_probs=57.7
Q ss_pred ccCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCch-------HHHHHHHHHHHHhhcccccccccccccc
Q 022733 40 KKNYYELLGVSVE--ANGQEIKEAYRKLQKKYHPDIAGQKG-------HEHTLLLNEAYKVLMRGDLRKDYDASIG 106 (293)
Q Consensus 40 ~~d~Y~iLgv~~~--as~~eIk~ayr~l~~~~HPD~~~~~~-------~~~~~~i~~Ay~vL~d~~~R~~YD~~~~ 106 (293)
+.|||++|||++. .+...+++.|+.|++++|||+....+ .+....||+||.+|+||.+|..|=..+.
T Consensus 1 ~~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~ 76 (173)
T PRK01773 1 MNNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALN 76 (173)
T ss_pred CCChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhc
Confidence 4699999999999 89999999999999999999975432 2356789999999999999999976543
No 62
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.04 E-value=9.8e-11 Score=111.24 Aligned_cols=71 Identities=28% Similarity=0.431 Sum_probs=63.0
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC---c----hHHHHHHHHHHHHhhccccccccccccccccc
Q 022733 39 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ---K----GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMR 109 (293)
Q Consensus 39 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~---~----~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 109 (293)
+-.|+||||||+.+++..+||++||+|+.+|||||.++ + -++.++.|++||+.|+|...|..|-.+|...+
T Consensus 96 ~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~ 173 (610)
T COG5407 96 RGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDS 173 (610)
T ss_pred cCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCC
Confidence 34699999999999999999999999999999999875 1 35688999999999999999999999875543
No 63
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.88 E-value=2e-09 Score=91.07 Aligned_cols=54 Identities=30% Similarity=0.490 Sum_probs=46.9
Q ss_pred CCHHHHHHHHHHHHHhhCCCCCCCc-------hHHHHHHHHHHHHhhcccccccccccccc
Q 022733 53 ANGQEIKEAYRKLQKKYHPDIAGQK-------GHEHTLLLNEAYKVLMRGDLRKDYDASIG 106 (293)
Q Consensus 53 as~~eIk~ayr~l~~~~HPD~~~~~-------~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~ 106 (293)
.+..+|+++|+++++++|||+.... +...+..||+||++|+||.+|..|+..+.
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~ 63 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH 63 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 4678999999999999999986432 34578899999999999999999998764
No 64
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.60 E-value=2.2e-08 Score=89.98 Aligned_cols=75 Identities=36% Similarity=0.412 Sum_probs=63.4
Q ss_pred CCCCCCCCCccCcccccCCCCC---CCHHHHHHHHHHHHHhhCCCCCC---Cc-hHHHHHHHHHHHHhhccccccccccc
Q 022733 31 GRAGERASKKKNYYELLGVSVE---ANGQEIKEAYRKLQKKYHPDIAG---QK-GHEHTLLLNEAYKVLMRGDLRKDYDA 103 (293)
Q Consensus 31 ~~~~~~~~~~~d~Y~iLgv~~~---as~~eIk~ayr~l~~~~HPD~~~---~~-~~~~~~~i~~Ay~vL~d~~~R~~YD~ 103 (293)
++.+.+.+...|+|.+|||+.- +++.+|.++.++.+.+||||+.. +. ....|+.|+.||+||+|+.+|..||.
T Consensus 33 ~~~d~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS 112 (379)
T COG5269 33 TREDFKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDS 112 (379)
T ss_pred HhhhhhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccc
Confidence 3445666777999999999876 88999999999999999999962 22 24689999999999999999999997
Q ss_pred cc
Q 022733 104 SI 105 (293)
Q Consensus 104 ~~ 105 (293)
.-
T Consensus 113 ~d 114 (379)
T COG5269 113 ND 114 (379)
T ss_pred cc
Confidence 53
No 65
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.50 E-value=1.8e-07 Score=72.73 Aligned_cols=67 Identities=25% Similarity=0.264 Sum_probs=57.8
Q ss_pred eeccCCCCCCCCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHhhccc
Q 022733 27 RCCNGRAGERASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRG 95 (293)
Q Consensus 27 ~~~~~~~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~~~~~~~~i~~Ay~vL~d~ 95 (293)
+....+.+.+.|+.+..-.||||+++++.+.||+|+|+++...|||+++.+ -.-.+||||+++|...
T Consensus 42 ~~~y~GGF~~kMsr~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP--YlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 42 GAFYKGGFEPKMSRREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP--YLASKINEAKDLLEGT 108 (112)
T ss_pred hhhhhcccccccchHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH--HHHHHHHHHHHHHhcc
Confidence 344566678889999999999999999999999999999999999999877 3345699999999754
No 66
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.33 E-value=2.6e-07 Score=81.45 Aligned_cols=57 Identities=30% Similarity=0.585 Sum_probs=50.8
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHH-hhcc
Q 022733 38 SKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYK-VLMR 94 (293)
Q Consensus 38 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~~~i~~Ay~-vL~d 94 (293)
-.-+.+|.||||...|+.++++.||..|++++|||.+.+. ..+.|.+|.+||. ||+.
T Consensus 44 e~~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq~ 102 (342)
T KOG0568|consen 44 EKIMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQE 102 (342)
T ss_pred HHHHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHHH
Confidence 3456899999999999999999999999999999998766 4679999999999 7764
No 67
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.24 E-value=1.3e-06 Score=90.65 Aligned_cols=59 Identities=31% Similarity=0.436 Sum_probs=50.2
Q ss_pred CCCCCccCcccccCCCCC----CCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHhhcc
Q 022733 35 ERASKKKNYYELLGVSVE----ANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMR 94 (293)
Q Consensus 35 ~~~~~~~d~Y~iLgv~~~----as~~eIk~ayr~l~~~~HPD~~~~~~~~~~~~i~~Ay~vL~d 94 (293)
...++..+.|+||.|+-+ -..+.||++|++|+.+||||||| ++.++|..+|+|||.|..
T Consensus 1275 P~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP-EGRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1275 PATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP-EGREMFERVNKAYELLSS 1337 (2235)
T ss_pred CCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc-hHHHHHHHHHHHHHHHHH
Confidence 444667889999998866 24588999999999999999996 567899999999999984
No 68
>PF13370 Fer4_13: 4Fe-4S single cluster domain; PDB: 1FXR_A 1DAX_A 1DFD_A 1WTF_A 1IR0_A 1IQZ_A 1SIZ_A 1SJ1_A 3PNI_B 2Z8Q_A ....
Probab=98.11 E-value=2.5e-07 Score=65.25 Aligned_cols=56 Identities=34% Similarity=0.570 Sum_probs=41.7
Q ss_pred cccccCcCCCCCcccccceeeeeCCcceEEEEEecCc--ccceecccccCCCcceeee
Q 022733 136 VDENACIGCRECVHHASNTFVMDEATGCARVKVQYGD--SDQNIEVSVDSCPVNCIHW 191 (293)
Q Consensus 136 vd~~~CigC~~C~~~ap~tf~~c~g~G~~~v~~q~g~--~~~~iq~ac~~Cpg~Cig~ 191 (293)
||.+.|++|+.|...+|+.|.+++..|...+..+..+ ....+..+...||+.+|++
T Consensus 1 VD~~~Ci~Cg~C~~~aP~vF~~~d~~~~~~v~~~~~~~~~~~~~~~A~~~CP~~aI~v 58 (58)
T PF13370_consen 1 VDRDKCIGCGLCVEIAPDVFDYDDDGGKAVVLDQPVPEEEEEAAREAAESCPTAAIRV 58 (58)
T ss_dssp E-TTT--S-SHHHHH-TTTEEEETTSTEEECTTCCCSHCHHHHHHHHHHHSTT--EEE
T ss_pred CChhhCcCCChHHHhCcHheeEcCCCCeEEEeCCCcChHHHHHHHHHHHcCCHhhcCC
Confidence 4678999999999999999999999888888777765 4467889999999999864
No 69
>PF13459 Fer4_15: 4Fe-4S single cluster domain
Probab=98.10 E-value=9.9e-07 Score=63.50 Aligned_cols=57 Identities=35% Similarity=0.763 Sum_probs=46.7
Q ss_pred cccccccCcCCCCCcccccceeeeeCCcceEEEEEe--------cCcccceecccccCCCcceeee
Q 022733 134 LFVDENACIGCRECVHHASNTFVMDEATGCARVKVQ--------YGDSDQNIEVSVDSCPVNCIHW 191 (293)
Q Consensus 134 ifvd~~~CigC~~C~~~ap~tf~~c~g~G~~~v~~q--------~g~~~~~iq~ac~~Cpg~Cig~ 191 (293)
+++|.+.|+||+.|...+|+.|.+++. |.++++.. .......++.+...||++||.+
T Consensus 1 V~vD~~~C~gcg~C~~~aP~vF~~d~~-g~a~~~~~~~~~~~~v~~~~~~~~~~Aa~~CP~~aI~v 65 (65)
T PF13459_consen 1 VWVDRDRCIGCGLCVELAPEVFELDDD-GKAVVLVDGGEGEGEVPEEDEEDVREAAEACPVGAIHV 65 (65)
T ss_pred CEEecccCcCccHHHhhCCccEEECCC-CCEEEEecCcccccCCCchhHHHHHHHHHhCCHhhEEC
Confidence 467889999999999999999999988 87766643 1225567889999999999964
No 70
>COG1141 Fer Ferredoxin [Energy production and conversion]
Probab=98.01 E-value=1.5e-06 Score=63.10 Aligned_cols=58 Identities=29% Similarity=0.647 Sum_probs=45.6
Q ss_pred cccccccCcCCCCCcccccceeeeeCCcceEEE------EEecCc-ccceecccccCCCcceeeee
Q 022733 134 LFVDENACIGCRECVHHASNTFVMDEATGCARV------KVQYGD-SDQNIEVSVDSCPVNCIHWV 192 (293)
Q Consensus 134 ifvd~~~CigC~~C~~~ap~tf~~c~g~G~~~v------~~q~g~-~~~~iq~ac~~Cpg~Cig~~ 192 (293)
+++|.++|++|+.|...+|++|.+.+. |.+++ ..+.++ ....++.|..+||+.||++.
T Consensus 3 v~vDrd~Cigcg~C~~~aPdvF~~~d~-G~a~~~~~~~~~~~~~~e~~~~~~~A~~~CP~~aI~v~ 67 (68)
T COG1141 3 VIVDRDTCIGCGACLAVAPDVFDYDDE-GIAFVLDGNIGEGEVPEELEEDAEDAAEACPTDAIKVE 67 (68)
T ss_pred EEechhhccccchhhhcCCcceeeCCC-cceEeccCccccccCChHHHHHHHHHHHhCCccceEec
Confidence 467889999999999999999999988 65533 222332 34678899999999999764
No 71
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.18 E-value=0.00027 Score=58.99 Aligned_cols=68 Identities=26% Similarity=0.518 Sum_probs=54.5
Q ss_pred CCccCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCc-------hHHHHHHHHHHHHhhccccccccccccc
Q 022733 38 SKKKNYYELLGVSVE--ANGQEIKEAYRKLQKKYHPDIAGQK-------GHEHTLLLNEAYKVLMRGDLRKDYDASI 105 (293)
Q Consensus 38 ~~~~d~Y~iLgv~~~--as~~eIk~ayr~l~~~~HPD~~~~~-------~~~~~~~i~~Ay~vL~d~~~R~~YD~~~ 105 (293)
....+||.++|.... ..+..++.-|.-.+++.|||+.... +.+....||+||.+|.||-.|+.|=..+
T Consensus 5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilkl 81 (168)
T KOG3192|consen 5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLKL 81 (168)
T ss_pred chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 445789999975554 5677777799999999999995422 4456789999999999999999997654
No 72
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=96.44 E-value=0.0055 Score=60.32 Aligned_cols=44 Identities=32% Similarity=0.379 Sum_probs=31.5
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCCCCch---------HHHHHHHHHHHHhh
Q 022733 49 VSVEANGQEIKEAYRKLQKKYHPDIAGQKG---------HEHTLLLNEAYKVL 92 (293)
Q Consensus 49 v~~~as~~eIk~ayr~l~~~~HPD~~~~~~---------~~~~~~i~~Ay~vL 92 (293)
+..-.+.++||++|||..+..||||.+... ++.|-.+++||...
T Consensus 396 ltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f 448 (453)
T KOG0431|consen 396 LTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKF 448 (453)
T ss_pred hhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence 333458999999999999999999986541 23445556666543
No 73
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.25 E-value=0.0021 Score=55.27 Aligned_cols=52 Identities=38% Similarity=0.583 Sum_probs=44.3
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc---------hHHHHHHHHHHHHhh
Q 022733 41 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK---------GHEHTLLLNEAYKVL 92 (293)
Q Consensus 41 ~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~---------~~~~~~~i~~Ay~vL 92 (293)
.+.|.+||+.+.+...+|+++|+++....|||+.... ..+.++.|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 6899999999999999999999999999999986321 345778889998754
No 74
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=95.34 E-value=0.023 Score=40.88 Aligned_cols=39 Identities=10% Similarity=0.067 Sum_probs=31.5
Q ss_pred ccccceeeeeCCcceEEEEEecCcccceecccccCCCcc
Q 022733 149 HHASNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPVN 187 (293)
Q Consensus 149 ~~ap~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg~ 187 (293)
...+.+|..|.|.|....+++.+++.++++.+|+.|.|.
T Consensus 12 ~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~ 50 (66)
T PF00684_consen 12 GKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGT 50 (66)
T ss_dssp TTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSS
T ss_pred CCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcce
Confidence 345679999999999999988777999999999999983
No 75
>PRK14300 chaperone protein DnaJ; Provisional
Probab=95.15 E-value=0.047 Score=52.48 Aligned_cols=34 Identities=6% Similarity=0.002 Sum_probs=26.0
Q ss_pred ceEEEEeCCCCCCCcEEecCCC-------CCCCceehhhHH
Q 022733 198 PVLEFLIQPQPKKGYGVFGGGW-------ERPANVFMAAKA 231 (293)
Q Consensus 198 k~LeV~Ip~G~~~G~~I~g~G~-------~~~~~vf~~~~~ 231 (293)
..++|.||+|+++|+.|.+.|. ..+||+||..++
T Consensus 292 ~~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~v 332 (372)
T PRK14300 292 GKVNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTHIHV 332 (372)
T ss_pred CEEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEE
Confidence 5799999999999999975552 235788876633
No 76
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.15 E-value=0.0093 Score=51.25 Aligned_cols=64 Identities=30% Similarity=0.497 Sum_probs=48.9
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHhhCCCCCCCch-------HHHHHHHHHHHHhhccccccccccccc
Q 022733 42 NYYELLGVSVEA--NGQEIKEAYRKLQKKYHPDIAGQKG-------HEHTLLLNEAYKVLMRGDLRKDYDASI 105 (293)
Q Consensus 42 d~Y~iLgv~~~a--s~~eIk~ayr~l~~~~HPD~~~~~~-------~~~~~~i~~Ay~vL~d~~~R~~YD~~~ 105 (293)
+++.++|.++.. ..+.++..|+.+++.+|||+....+ ...+..+|.||.+|.||-+|..|=...
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal 74 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLAL 74 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHh
Confidence 345555655553 4566899999999999999986542 236778999999999999999986544
No 77
>PRK14295 chaperone protein DnaJ; Provisional
Probab=94.87 E-value=0.068 Score=51.70 Aligned_cols=34 Identities=12% Similarity=0.175 Sum_probs=25.9
Q ss_pred cceEEEEeCCCCCCCcEEecCCCC------CCCceehhhH
Q 022733 197 LPVLEFLIQPQPKKGYGVFGGGWE------RPANVFMAAK 230 (293)
Q Consensus 197 ~k~LeV~Ip~G~~~G~~I~g~G~~------~~~~vf~~~~ 230 (293)
-..++|.||+|+.+|+.|.++|.+ ..||+||...
T Consensus 312 G~~~~v~ip~g~~~g~~iri~G~G~p~~~~~~GDL~i~~~ 351 (389)
T PRK14295 312 GPPVTVKLPPGTPNGRVLRVRGKGAVRKDGTRGDLLVTVE 351 (389)
T ss_pred CCEEEEEECCccCCCcEEEECCCCcCCCCCCCCCEEEEEE
Confidence 347899999999999999766643 3478877653
No 78
>PRK14285 chaperone protein DnaJ; Provisional
Probab=94.87 E-value=0.068 Score=51.25 Aligned_cols=32 Identities=6% Similarity=-0.019 Sum_probs=24.5
Q ss_pred ceEEEEeCCCCCCCcEEecCCCCC-------CCceehhh
Q 022733 198 PVLEFLIQPQPKKGYGVFGGGWER-------PANVFMAA 229 (293)
Q Consensus 198 k~LeV~Ip~G~~~G~~I~g~G~~~-------~~~vf~~~ 229 (293)
..++|.||+|+.+|+.|.++|.+- .||+||..
T Consensus 293 ~~v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~~ 331 (365)
T PRK14285 293 KKIKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILII 331 (365)
T ss_pred CEEEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEEE
Confidence 478999999999999997655332 37777765
No 79
>PRK14291 chaperone protein DnaJ; Provisional
Probab=94.85 E-value=0.067 Score=51.60 Aligned_cols=36 Identities=14% Similarity=0.083 Sum_probs=26.7
Q ss_pred ccceEEEEeCCCCCCCcEEecCCCC-------CCCceehhhHH
Q 022733 196 ELPVLEFLIQPQPKKGYGVFGGGWE-------RPANVFMAAKA 231 (293)
Q Consensus 196 e~k~LeV~Ip~G~~~G~~I~g~G~~-------~~~~vf~~~~~ 231 (293)
+-..++|.||+|+++|+.|...|.+ ..||+||..++
T Consensus 300 dG~~l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~~~V 342 (382)
T PRK14291 300 DGKKEKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHI 342 (382)
T ss_pred CCCEEEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEEEEEE
Confidence 3457899999999999998655532 34788887643
No 80
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=94.82 E-value=0.051 Score=44.34 Aligned_cols=57 Identities=21% Similarity=0.202 Sum_probs=38.8
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHhhccc
Q 022733 37 ASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRG 95 (293)
Q Consensus 37 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~~~~~~~~i~~Ay~vL~d~ 95 (293)
.++-.....||||++..+.++|.+.|.+|-...+|++++..- .--+|..|.+.|..+
T Consensus 54 ~Mtl~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGSfY--LQSKV~rAKErl~~E 110 (127)
T PF03656_consen 54 GMTLDEARQILNVKEELSREEIQKRYKHLFKANDPSKGGSFY--LQSKVFRAKERLEQE 110 (127)
T ss_dssp ---HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-HH--HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCCHH--HHHHHHHHHHHHHHH
Confidence 466667789999999999999999999999999999886542 223577788887644
No 81
>PRK14282 chaperone protein DnaJ; Provisional
Probab=94.76 E-value=0.08 Score=50.84 Aligned_cols=35 Identities=14% Similarity=0.046 Sum_probs=26.2
Q ss_pred ccceEEEEeCCCCCCCcEEecCCCC-------CCCceehhhH
Q 022733 196 ELPVLEFLIQPQPKKGYGVFGGGWE-------RPANVFMAAK 230 (293)
Q Consensus 196 e~k~LeV~Ip~G~~~G~~I~g~G~~-------~~~~vf~~~~ 230 (293)
+-..++|.||+|+.+|+.|.++|.+ ..||+||...
T Consensus 301 dG~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~~~ 342 (369)
T PRK14282 301 EGGTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVH 342 (369)
T ss_pred CCcEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEE
Confidence 3356899999999999998755522 3478888763
No 82
>PRK14284 chaperone protein DnaJ; Provisional
Probab=94.76 E-value=0.06 Score=52.09 Aligned_cols=33 Identities=9% Similarity=0.020 Sum_probs=25.4
Q ss_pred ceEEEEeCCCCCCCcEEecCCCC-------CCCceehhhH
Q 022733 198 PVLEFLIQPQPKKGYGVFGGGWE-------RPANVFMAAK 230 (293)
Q Consensus 198 k~LeV~Ip~G~~~G~~I~g~G~~-------~~~~vf~~~~ 230 (293)
..++|.||+|+.+|+.|.++|.| ..||+||...
T Consensus 306 ~~i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~ 345 (391)
T PRK14284 306 GTCRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLVRIS 345 (391)
T ss_pred cEEEEEECCccCCCeEEEECCCCCCCCCCCCCCcEEEEEE
Confidence 47899999999999998755532 3478887653
No 83
>PRK14278 chaperone protein DnaJ; Provisional
Probab=94.69 E-value=0.076 Score=51.19 Aligned_cols=33 Identities=15% Similarity=0.129 Sum_probs=25.3
Q ss_pred ceEEEEeCCCCCCCcEEecCCCC-------CCCceehhhH
Q 022733 198 PVLEFLIQPQPKKGYGVFGGGWE-------RPANVFMAAK 230 (293)
Q Consensus 198 k~LeV~Ip~G~~~G~~I~g~G~~-------~~~~vf~~~~ 230 (293)
..++|.||+|+.+|+.+.++|.| ..||+||..+
T Consensus 290 ~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~~~ 329 (378)
T PRK14278 290 GPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVE 329 (378)
T ss_pred CeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEE
Confidence 56899999999999998755533 3478887653
No 84
>PRK14301 chaperone protein DnaJ; Provisional
Probab=94.26 E-value=0.092 Score=50.53 Aligned_cols=32 Identities=9% Similarity=0.078 Sum_probs=24.6
Q ss_pred EEEEeCCCCCCCcEEecCCCC-------CCCceehhhHH
Q 022733 200 LEFLIQPQPKKGYGVFGGGWE-------RPANVFMAAKA 231 (293)
Q Consensus 200 LeV~Ip~G~~~G~~I~g~G~~-------~~~~vf~~~~~ 231 (293)
++|.||+|+++|+.|.++|.| ..||+||...+
T Consensus 292 i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I~~~V 330 (373)
T PRK14301 292 VTLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLVEVSV 330 (373)
T ss_pred EEEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEEEEEE
Confidence 899999999999999765533 34788876644
No 85
>PRK14290 chaperone protein DnaJ; Provisional
Probab=94.24 E-value=0.11 Score=49.73 Aligned_cols=33 Identities=9% Similarity=0.048 Sum_probs=24.9
Q ss_pred ceEEEEeCCCCCCCcEEecCCCC-------CCCceehhhH
Q 022733 198 PVLEFLIQPQPKKGYGVFGGGWE-------RPANVFMAAK 230 (293)
Q Consensus 198 k~LeV~Ip~G~~~G~~I~g~G~~-------~~~~vf~~~~ 230 (293)
..++|.||+|++.|+.|.+.|.+ .+||+||..+
T Consensus 296 g~i~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~ 335 (365)
T PRK14290 296 EKYNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVRIN 335 (365)
T ss_pred ceEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEE
Confidence 35899999999999999755532 3578777663
No 86
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=94.23 E-value=0.11 Score=49.83 Aligned_cols=32 Identities=16% Similarity=0.231 Sum_probs=25.1
Q ss_pred EEEEeCCCCCCCcEEecCCCCCC-------CceehhhHH
Q 022733 200 LEFLIQPQPKKGYGVFGGGWERP-------ANVFMAAKA 231 (293)
Q Consensus 200 LeV~Ip~G~~~G~~I~g~G~~~~-------~~vf~~~~~ 231 (293)
++|.||+|...|..+.++|.+-| ||+||...+
T Consensus 292 ~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~v~v 330 (371)
T COG0484 292 VKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVRVKV 330 (371)
T ss_pred EEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEEEEE
Confidence 89999999999999876664433 788876643
No 87
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=94.21 E-value=0.0094 Score=61.39 Aligned_cols=55 Identities=13% Similarity=0.076 Sum_probs=40.4
Q ss_pred eeecccceEEEEeCCCCCCCcEEecCC--C---CCCCceehhhHHHHHHHHHHhhCCCCC
Q 022733 192 VDREELPVLEFLIQPQPKKGYGVFGGG--W---ERPANVFMAAKAFNKQLQQQAAGGSNP 246 (293)
Q Consensus 192 ~~~~e~k~LeV~Ip~G~~~G~~I~g~G--~---~~~~~vf~~~~~~~~~~~~~~~~~~~~ 246 (293)
..+.+.+.|+|.||+|+++|++|+..| . +.+|||++..+.....+++|+.+|||-
T Consensus 691 ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegpgg~GDLyVvIkVKPHp~FrRdGdDL~~ 750 (871)
T TIGR03835 691 STTNEAITLEIQLPITSQLNISAIFKGFGHDFGNGCGDLKVVFKVIPSNFFQIKNDGLHV 750 (871)
T ss_pred ceeeeeEEEEEecCCCCCCCCEEEeccccCCCCCCCCCEEEEEEEcCCCCeEEECCeEEE
Confidence 345667799999999999999996444 1 224899988866555556667767765
No 88
>PRK14286 chaperone protein DnaJ; Provisional
Probab=94.15 E-value=0.12 Score=49.70 Aligned_cols=33 Identities=9% Similarity=-0.056 Sum_probs=24.6
Q ss_pred cceEEEEeCCCCCCCcEEecCCCCC-------CCceehhh
Q 022733 197 LPVLEFLIQPQPKKGYGVFGGGWER-------PANVFMAA 229 (293)
Q Consensus 197 ~k~LeV~Ip~G~~~G~~I~g~G~~~-------~~~vf~~~ 229 (293)
-..++|.||+|+..|+.+.++|.|. .||+||..
T Consensus 296 G~~i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~~ 335 (372)
T PRK14286 296 GKKAKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIV 335 (372)
T ss_pred CCEEEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEEE
Confidence 3468999999999999987665433 36777665
No 89
>PRK14281 chaperone protein DnaJ; Provisional
Probab=94.10 E-value=0.11 Score=50.47 Aligned_cols=32 Identities=6% Similarity=0.017 Sum_probs=24.5
Q ss_pred EEEEeCCCCCCCcEEecCCCCC-------CCceehhhHH
Q 022733 200 LEFLIQPQPKKGYGVFGGGWER-------PANVFMAAKA 231 (293)
Q Consensus 200 LeV~Ip~G~~~G~~I~g~G~~~-------~~~vf~~~~~ 231 (293)
++|.||+|+.+|+.+.++|.|- .||+||..++
T Consensus 314 i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V~~~V 352 (397)
T PRK14281 314 VKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVRVNV 352 (397)
T ss_pred EEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEEEEEE
Confidence 7999999999999987655332 3788887643
No 90
>PRK14298 chaperone protein DnaJ; Provisional
Probab=94.00 E-value=0.11 Score=49.94 Aligned_cols=31 Identities=6% Similarity=-0.050 Sum_probs=24.1
Q ss_pred EEEEeCCCCCCCcEEecCCCC-------CCCceehhhH
Q 022733 200 LEFLIQPQPKKGYGVFGGGWE-------RPANVFMAAK 230 (293)
Q Consensus 200 LeV~Ip~G~~~G~~I~g~G~~-------~~~~vf~~~~ 230 (293)
++|.||+|+..|+.+.++|.| ..||+||...
T Consensus 293 i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~~~ 330 (377)
T PRK14298 293 VKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVKVI 330 (377)
T ss_pred EEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEEEE
Confidence 799999999999998766533 2478888763
No 91
>PRK14279 chaperone protein DnaJ; Provisional
Probab=93.76 E-value=0.15 Score=49.41 Aligned_cols=32 Identities=9% Similarity=0.103 Sum_probs=24.5
Q ss_pred eEEEEeCCCCCCCcEEecCCCC------CCCceehhhH
Q 022733 199 VLEFLIQPQPKKGYGVFGGGWE------RPANVFMAAK 230 (293)
Q Consensus 199 ~LeV~Ip~G~~~G~~I~g~G~~------~~~~vf~~~~ 230 (293)
.++|.||+|+++|+.|.++|.+ ..||+||..+
T Consensus 320 ~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~GDL~I~~~ 357 (392)
T PRK14279 320 PVGVKVPAGTADGRILRVRGRGVPKRSGGAGDLLVTVK 357 (392)
T ss_pred eEEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEEE
Confidence 3799999999999999766633 3478877653
No 92
>PRK14294 chaperone protein DnaJ; Provisional
Probab=93.57 E-value=0.17 Score=48.57 Aligned_cols=32 Identities=13% Similarity=0.012 Sum_probs=24.5
Q ss_pred EEEEeCCCCCCCcEEecCCCC-------CCCceehhhHH
Q 022733 200 LEFLIQPQPKKGYGVFGGGWE-------RPANVFMAAKA 231 (293)
Q Consensus 200 LeV~Ip~G~~~G~~I~g~G~~-------~~~~vf~~~~~ 231 (293)
++|.||+|+.+|+.|...|.| ..||+||...+
T Consensus 292 ~~v~ip~g~~~g~~iri~G~G~p~~~~~~~GDL~V~~~v 330 (366)
T PRK14294 292 RELKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQIIEVEV 330 (366)
T ss_pred EEEEECCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEE
Confidence 599999999999998755532 35788887643
No 93
>PRK14297 chaperone protein DnaJ; Provisional
Probab=93.57 E-value=0.15 Score=49.23 Aligned_cols=33 Identities=9% Similarity=0.083 Sum_probs=24.7
Q ss_pred eEEEEeCCCCCCCcEEecCCCC-------CCCceehhhHH
Q 022733 199 VLEFLIQPQPKKGYGVFGGGWE-------RPANVFMAAKA 231 (293)
Q Consensus 199 ~LeV~Ip~G~~~G~~I~g~G~~-------~~~~vf~~~~~ 231 (293)
.++|.||+|+.+|+.+.++|.| ..||+||...+
T Consensus 299 ~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v 338 (380)
T PRK14297 299 EVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVTVIV 338 (380)
T ss_pred cEEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEEEEEE
Confidence 3799999999999998755533 34788876533
No 94
>PRK14288 chaperone protein DnaJ; Provisional
Probab=93.51 E-value=0.2 Score=48.21 Aligned_cols=33 Identities=9% Similarity=-0.014 Sum_probs=24.9
Q ss_pred ceEEEEeCCCCCCCcEEecCCCCC-------CCceehhhH
Q 022733 198 PVLEFLIQPQPKKGYGVFGGGWER-------PANVFMAAK 230 (293)
Q Consensus 198 k~LeV~Ip~G~~~G~~I~g~G~~~-------~~~vf~~~~ 230 (293)
..++|.||+|+..|+.+.+.|.|- -||+||..+
T Consensus 285 ~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~ 324 (369)
T PRK14288 285 DELELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIVELQ 324 (369)
T ss_pred CEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEE
Confidence 458999999999999987555332 278888763
No 95
>PRK14280 chaperone protein DnaJ; Provisional
Probab=93.45 E-value=0.18 Score=48.58 Aligned_cols=31 Identities=10% Similarity=0.113 Sum_probs=23.5
Q ss_pred eEEEEeCCCCCCCcEEecCCCC-------CCCceehhh
Q 022733 199 VLEFLIQPQPKKGYGVFGGGWE-------RPANVFMAA 229 (293)
Q Consensus 199 ~LeV~Ip~G~~~G~~I~g~G~~-------~~~~vf~~~ 229 (293)
.++|.||+|+..|+.+.+.|.| ..||+||..
T Consensus 294 ~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~ 331 (376)
T PRK14280 294 KVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVVV 331 (376)
T ss_pred eEEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEE
Confidence 3799999999999998755533 247887765
No 96
>PRK14277 chaperone protein DnaJ; Provisional
Probab=93.28 E-value=0.2 Score=48.38 Aligned_cols=32 Identities=16% Similarity=0.168 Sum_probs=24.2
Q ss_pred EEEEeCCCCCCCcEEecCCCCCC-------CceehhhHH
Q 022733 200 LEFLIQPQPKKGYGVFGGGWERP-------ANVFMAAKA 231 (293)
Q Consensus 200 LeV~Ip~G~~~G~~I~g~G~~~~-------~~vf~~~~~ 231 (293)
++|.||+|+..|+.+.++|.|.| ||+||..++
T Consensus 307 ~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~V 345 (386)
T PRK14277 307 VKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIVKVYI 345 (386)
T ss_pred EEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEE
Confidence 79999999999999976664433 677776533
No 97
>PRK10767 chaperone protein DnaJ; Provisional
Probab=93.22 E-value=0.2 Score=48.16 Aligned_cols=33 Identities=9% Similarity=0.046 Sum_probs=25.2
Q ss_pred eEEEEeCCCCCCCcEEecCCCC-------CCCceehhhHH
Q 022733 199 VLEFLIQPQPKKGYGVFGGGWE-------RPANVFMAAKA 231 (293)
Q Consensus 199 ~LeV~Ip~G~~~G~~I~g~G~~-------~~~~vf~~~~~ 231 (293)
.++|.||+|+..|+.+.+.|.| ..||+||...+
T Consensus 289 ~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v 328 (371)
T PRK10767 289 RVKLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVV 328 (371)
T ss_pred cEEEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEE
Confidence 5899999999999998655522 34888887633
No 98
>PRK14289 chaperone protein DnaJ; Provisional
Probab=93.20 E-value=0.17 Score=48.89 Aligned_cols=33 Identities=6% Similarity=0.003 Sum_probs=24.8
Q ss_pred eEEEEeCCCCCCCcEEecCCCC-------CCCceehhhHH
Q 022733 199 VLEFLIQPQPKKGYGVFGGGWE-------RPANVFMAAKA 231 (293)
Q Consensus 199 ~LeV~Ip~G~~~G~~I~g~G~~-------~~~~vf~~~~~ 231 (293)
.++|.||+|+++|+.+++.|.| ..||+||..++
T Consensus 305 ~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v 344 (386)
T PRK14289 305 KAKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLVNVSV 344 (386)
T ss_pred eEEEEECCccCCCcEEEECCCCcCCCCCCCCCcEEEEEEE
Confidence 4799999999999998755533 35788776643
No 99
>PRK14276 chaperone protein DnaJ; Provisional
Probab=93.07 E-value=0.21 Score=48.18 Aligned_cols=33 Identities=12% Similarity=0.062 Sum_probs=24.6
Q ss_pred eEEEEeCCCCCCCcEEecCCC-------CCCCceehhhHH
Q 022733 199 VLEFLIQPQPKKGYGVFGGGW-------ERPANVFMAAKA 231 (293)
Q Consensus 199 ~LeV~Ip~G~~~G~~I~g~G~-------~~~~~vf~~~~~ 231 (293)
.++|.||+|+++|+.+.++|. +..||+||...+
T Consensus 297 ~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v 336 (380)
T PRK14276 297 DVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVTVNI 336 (380)
T ss_pred cEEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEE
Confidence 379999999999999865552 235788877533
No 100
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=92.98 E-value=0.24 Score=47.20 Aligned_cols=33 Identities=12% Similarity=0.104 Sum_probs=25.1
Q ss_pred eEEEEeCCCCCCCcEEecCCCC-------CCCceehhhHH
Q 022733 199 VLEFLIQPQPKKGYGVFGGGWE-------RPANVFMAAKA 231 (293)
Q Consensus 199 ~LeV~Ip~G~~~G~~I~g~G~~-------~~~~vf~~~~~ 231 (293)
.++|.||+|+.+|+.+..+|.| ..||+||...+
T Consensus 294 ~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~~~v 333 (354)
T TIGR02349 294 DVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVTVKV 333 (354)
T ss_pred eEEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEEEEE
Confidence 5899999999999998755532 35788876643
No 101
>PRK14287 chaperone protein DnaJ; Provisional
Probab=92.36 E-value=0.28 Score=47.18 Aligned_cols=32 Identities=9% Similarity=0.096 Sum_probs=24.4
Q ss_pred eEEEEeCCCCCCCcEEecCCCC-------CCCceehhhH
Q 022733 199 VLEFLIQPQPKKGYGVFGGGWE-------RPANVFMAAK 230 (293)
Q Consensus 199 ~LeV~Ip~G~~~G~~I~g~G~~-------~~~~vf~~~~ 230 (293)
.++|.||+|+..|+.+.+.|.| ..||+||...
T Consensus 289 ~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V~~~ 327 (371)
T PRK14287 289 KVKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQVR 327 (371)
T ss_pred CEEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEEEEE
Confidence 3799999999999998755532 3488888763
No 102
>PRK14283 chaperone protein DnaJ; Provisional
Probab=92.29 E-value=0.34 Score=46.65 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=25.2
Q ss_pred eEEEEeCCCCCCCcEEecCCCC-------CCCceehhhHH
Q 022733 199 VLEFLIQPQPKKGYGVFGGGWE-------RPANVFMAAKA 231 (293)
Q Consensus 199 ~LeV~Ip~G~~~G~~I~g~G~~-------~~~~vf~~~~~ 231 (293)
.++|.||+|++.|+.|.++|.| ..||+||....
T Consensus 297 ~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GdL~v~~~v 336 (378)
T PRK14283 297 PVELKIPAGTQSGTTFRLKGHGMPSLRWSGKGNLYVKVKV 336 (378)
T ss_pred eEEEEeCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEE
Confidence 6899999999999998766533 23788876643
No 103
>PRK14296 chaperone protein DnaJ; Provisional
Probab=92.23 E-value=0.33 Score=46.68 Aligned_cols=32 Identities=0% Similarity=-0.005 Sum_probs=24.7
Q ss_pred EEEEeCCCCCCCcEEecCCCCCC--------CceehhhHH
Q 022733 200 LEFLIQPQPKKGYGVFGGGWERP--------ANVFMAAKA 231 (293)
Q Consensus 200 LeV~Ip~G~~~G~~I~g~G~~~~--------~~vf~~~~~ 231 (293)
++|.||+++..|+.+.++|.|-| ||+||..++
T Consensus 302 ~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V 341 (372)
T PRK14296 302 IKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNI 341 (372)
T ss_pred EEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEE
Confidence 79999999999999976665433 677776644
No 104
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=92.12 E-value=0.18 Score=40.16 Aligned_cols=44 Identities=14% Similarity=0.228 Sum_probs=33.0
Q ss_pred cCcCCCCCcccccceeeeeCCcceEEEEEecCcccceecccccCCCc
Q 022733 140 ACIGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPV 186 (293)
Q Consensus 140 ~CigC~~C~~~ap~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg 186 (293)
.-..|..|.+....+|..|+|.|...... ++ .++++..|+.|.|
T Consensus 40 ~~v~C~~C~GsG~~~C~~C~G~G~v~~~~--~g-~~q~~~~C~~C~G 83 (111)
T PLN03165 40 NTQPCFPCSGTGAQVCRFCVGSGNVTVEL--GG-GEKEVSKCINCDG 83 (111)
T ss_pred cCCCCCCCCCCCCcCCCCCcCcCeEEEEe--CC-cEEEEEECCCCCC
Confidence 34577777777778999999999876443 32 3567888999988
No 105
>PF06902 Fer4_19: Divergent 4Fe-4S mono-cluster; InterPro: IPR010693 This entry represents bacterial ferredoxins such Ferredoxin-1, -2 and -soy from Streptomyces griseolus and Ferredoxin fas2 from Rhodococcus fascians, plus several bacterial hypothetical proteins that contain three highly conserved cysteine residues. These ferredoxins each bind a 3Fe-4S cluster. Ferredoxin-soy (SoyB) act as electron transport protein for the cytochrome P450-SOY system []. Ferredoxin-1 (SuaB) and Ferredoxin-2 (SubB) act as electron transport proteins for the herbicide-metabolising cytochrome P-450 SU1 and SU2 systems, respectively [, ]. Ferredoxin-fas2 also plays a role in electrontransfer, the fas operon encoding genes involved in cytokinin production and in host plant fasciation (leafy gall).
Probab=91.22 E-value=0.062 Score=38.57 Aligned_cols=55 Identities=24% Similarity=0.451 Sum_probs=43.3
Q ss_pred ccccccccCcCCCCCcccccceeeeeCCcceEEEEEecCcccceecccccCCCcceeee
Q 022733 133 ALFVDENACIGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPVNCIHW 191 (293)
Q Consensus 133 difvd~~~CigC~~C~~~ap~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg~Cig~ 191 (293)
+++.+..+|++-+.|+...|.+|...+. |-. ...+.....+..++..||..++..
T Consensus 7 ~V~~d~~~C~hag~Cv~~~p~VFd~~~~-~~v---~~d~a~~~~v~~~v~~CPSGAL~~ 61 (64)
T PF06902_consen 7 TVTWDRERCIHAGFCVRGAPEVFDQDDE-PWV---SPDEASAEEVREAVDRCPSGALSY 61 (64)
T ss_pred EEEECcCcccchhhhhcCCCCcccCCCC-CcC---CcCccCHHHHHHHHHcCCccCcEE
Confidence 4666788999999999999999998887 654 333335677889999999977643
No 106
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=91.18 E-value=0.52 Score=46.15 Aligned_cols=33 Identities=15% Similarity=0.059 Sum_probs=24.0
Q ss_pred ceEEEEeCCC--CCCCcEEecCCCC--------CCCceehhhH
Q 022733 198 PVLEFLIQPQ--PKKGYGVFGGGWE--------RPANVFMAAK 230 (293)
Q Consensus 198 k~LeV~Ip~G--~~~G~~I~g~G~~--------~~~~vf~~~~ 230 (293)
..|+|.||+| +..|+.+.++|.| .-||+||..+
T Consensus 301 ~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~ 343 (421)
T PTZ00037 301 RKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFE 343 (421)
T ss_pred CeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEEEE
Confidence 4689999999 8999988655522 2378887663
No 107
>PRK14293 chaperone protein DnaJ; Provisional
Probab=90.51 E-value=0.63 Score=44.77 Aligned_cols=31 Identities=10% Similarity=0.040 Sum_probs=23.7
Q ss_pred EEEEeCCCCCCCcEEecCCCC--------CCCceehhhH
Q 022733 200 LEFLIQPQPKKGYGVFGGGWE--------RPANVFMAAK 230 (293)
Q Consensus 200 LeV~Ip~G~~~G~~I~g~G~~--------~~~~vf~~~~ 230 (293)
++|.||+|++.|+++.+.|.| .-||+||...
T Consensus 295 ~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~v~~~ 333 (374)
T PRK14293 295 VELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVK 333 (374)
T ss_pred EEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEEEEEE
Confidence 689999999999998755532 2378887763
No 108
>PF12797 Fer4_2: 4Fe-4S binding domain; InterPro: IPR001450 This superfamily includes proteins containing domains which bind to iron-sulphur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Ferredoxins are iron-sulphur proteins that mediate electron transfer in a range of metabolic reactions; they fall into several subgroups according to the nature of their iron-sulphur cluster(s) [, ]. One group, originally found in bacteria, has been termed "bacterial-type", in which the active centre is a 4Fe-4S cluster. 4Fe-4S ferredoxins may in turn be subdivided into further groups, based on their sequence properties. Most contain at least one conserved domain, including four Cys residues that bind to a 4Fe-4S centre. ; GO: 0009055 electron carrier activity, 0051536 iron-sulfur cluster binding
Probab=90.06 E-value=0.089 Score=29.61 Aligned_cols=19 Identities=32% Similarity=0.850 Sum_probs=15.6
Q ss_pred cccccccCcCCCCCccccc
Q 022733 134 LFVDENACIGCRECVHHAS 152 (293)
Q Consensus 134 ifvd~~~CigC~~C~~~ap 152 (293)
+++|.++|+||+.|....|
T Consensus 3 ~~iD~~rCiGC~~C~~AC~ 21 (22)
T PF12797_consen 3 MVIDLERCIGCGACEVACP 21 (22)
T ss_pred eEEccccccCchhHHHhhC
Confidence 6789999999999986443
No 109
>PRK14292 chaperone protein DnaJ; Provisional
Probab=89.46 E-value=0.89 Score=43.65 Aligned_cols=32 Identities=9% Similarity=0.057 Sum_probs=23.9
Q ss_pred EEEEeCCCCCCCcEEecCCC-------CCCCceehhhHH
Q 022733 200 LEFLIQPQPKKGYGVFGGGW-------ERPANVFMAAKA 231 (293)
Q Consensus 200 LeV~Ip~G~~~G~~I~g~G~-------~~~~~vf~~~~~ 231 (293)
.+|.||+|+.+|+.+...|. ..+||+||..++
T Consensus 290 ~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v 328 (371)
T PRK14292 290 QVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIVEYEI 328 (371)
T ss_pred EEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEE
Confidence 47999999999999865552 235788877643
No 110
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=89.45 E-value=0.33 Score=42.20 Aligned_cols=52 Identities=10% Similarity=-0.130 Sum_probs=34.5
Q ss_pred ceeeeeCCcceEEEEEecCcccceecccccCCCcceeeeeeecccceEEEEeCCCCCCCcEEecCCC
Q 022733 153 NTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPVNCIHWVDREELPVLEFLIQPQPKKGYGVFGGGW 219 (293)
Q Consensus 153 ~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg~Cig~~~~~e~k~LeV~Ip~G~~~G~~I~g~G~ 219 (293)
.+|..|.|.|.... -...|+.|+| .+.+...+.+.+.+ .|+.+|++|...-+
T Consensus 100 ~~C~~C~G~G~~i~----------~~~~C~~C~G----~G~v~~~~~~~~k~-~g~~~g~~it~~~~ 151 (186)
T TIGR02642 100 CKCPRCRGTGLIQR----------RQRECDTCAG----TGRFRPTVEDLLKS-FGVDSGAAIVLKDN 151 (186)
T ss_pred CcCCCCCCeeEEec----------CCCCCCCCCC----ccEEeeeEEEEEEe-eeccCCceeeHHHh
Confidence 45666667775321 0144666655 45566666778888 99999999987654
No 111
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=85.70 E-value=1.7 Score=38.10 Aligned_cols=39 Identities=26% Similarity=0.383 Sum_probs=31.3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHhhcc
Q 022733 50 SVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMR 94 (293)
Q Consensus 50 ~~~as~~eIk~ayr~l~~~~HPD~~~~~~~~~~~~i~~Ay~vL~d 94 (293)
+++||.+||.+|+.++..+|--| ++....|..||+.+.=
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd------~~~~~~IEaAYD~ILM 39 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGD------EKSREAIEAAYDAILM 39 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCC------HHHHHHHHHHHHHHHH
Confidence 57999999999999999999322 3566779999997653
No 112
>PF13446 RPT: A repeated domain in UCH-protein
Probab=84.80 E-value=1.6 Score=30.68 Aligned_cols=45 Identities=24% Similarity=0.429 Sum_probs=33.0
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHhhcc
Q 022733 41 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMR 94 (293)
Q Consensus 41 ~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~~~~~~~~i~~Ay~vL~d 94 (293)
.+.|++|||+++.+.+.|-.+|+.... -.| .....+.+|..++.+
T Consensus 5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~-~~P--------~~~~~~r~AL~~Ia~ 49 (62)
T PF13446_consen 5 EEAYEILGIDEDTDDDFIISAFQSKVN-DDP--------SQKDTLREALRVIAE 49 (62)
T ss_pred HHHHHHhCcCCCCCHHHHHHHHHHHHH-cCh--------HhHHHHHHHHHHHHH
Confidence 467999999999999999999998777 112 233445666666653
No 113
>COG0437 HybA Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion]
Probab=82.37 E-value=0.39 Score=42.31 Aligned_cols=57 Identities=21% Similarity=0.509 Sum_probs=36.7
Q ss_pred cccccccCcCCCCCcccccc-------------eeeeeCCcceEEEEEecCcccceecccccCCCcceeeeeeecccceE
Q 022733 134 LFVDENACIGCRECVHHASN-------------TFVMDEATGCARVKVQYGDSDQNIEVSVDSCPVNCIHWVDREELPVL 200 (293)
Q Consensus 134 ifvd~~~CigC~~C~~~ap~-------------tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg~Cig~~~~~e~k~L 200 (293)
+.+|.+.||||+.|...+|- .|++|-... ..| ....-...||++++.++..++....
T Consensus 95 V~vd~d~CIGC~yCi~ACPyga~~~~~~~~~~~KCt~C~~ri------~~g----~~PaCV~~CP~~A~~fG~~~d~~~~ 164 (203)
T COG0437 95 VLVDKDLCIGCGYCIAACPYGAPQFNPDKGVVDKCTFCVDRV------AVG----KLPACVEACPTGALIFGDIDDPKSK 164 (203)
T ss_pred EEecCCcccCchHHHhhCCCCCceeCcccCcccccCcchhhH------hcC----CCCcccccCCcccccccchhhcchh
Confidence 44678899999999977663 233332110 001 2234468899999999988886554
No 114
>KOG3256 consensus NADH:ubiquinone oxidoreductase, NDUFS8/23 kDa subunit [Energy production and conversion]
Probab=80.16 E-value=0.93 Score=38.56 Aligned_cols=69 Identities=20% Similarity=0.350 Sum_probs=41.4
Q ss_pred CCCCCCCCccccccccCcCCCCCcccccceee----eeCCcceEEEEEecCccccee--cccccCCCcceeeeee
Q 022733 125 WKGPPRPEALFVDENACIGCRECVHHASNTFV----MDEATGCARVKVQYGDSDQNI--EVSVDSCPVNCIHWVD 193 (293)
Q Consensus 125 ~~gp~r~~difvd~~~CigC~~C~~~ap~tf~----~c~g~G~~~v~~q~g~~~~~i--q~ac~~Cpg~Cig~~~ 193 (293)
|+|.-...-+...+++|+.|..|...+|..-. -....|..+.++-..+|-.-| .--.+.||++||..+.
T Consensus 97 FRGehalrRyp~geerCIACklCeavCPaqaitieae~r~dgsrRttrYdIDmtkCIyCG~CqEaCPvdaivegp 171 (212)
T KOG3256|consen 97 FRGEHALRRYPSGEERCIACKLCEAVCPAQAITIEAEERTDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 171 (212)
T ss_pred cccchhhhcCCCcchhhhhHHHHHHhCCcccceeeceecCCccccceeecccceeeeeecchhhhCCccceeccC
Confidence 33333333455668899999999988886321 122336666666655543322 1223578999997663
No 115
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=79.50 E-value=2.1 Score=40.35 Aligned_cols=52 Identities=25% Similarity=0.326 Sum_probs=42.1
Q ss_pred CCHHHHHHHHHHHHHhhCCCCCCC------chHHHHHHHHHHHHhhcccccccccccc
Q 022733 53 ANGQEIKEAYRKLQKKYHPDIAGQ------KGHEHTLLLNEAYKVLMRGDLRKDYDAS 104 (293)
Q Consensus 53 as~~eIk~ayr~l~~~~HPD~~~~------~~~~~~~~i~~Ay~vL~d~~~R~~YD~~ 104 (293)
++..+|..+|+...+..||++... ...+.++.|.+||.+|.+...|..+|..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~ 61 (335)
T KOG0724|consen 4 ASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSW 61 (335)
T ss_pred ccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhh
Confidence 577889999999999999998742 3456889999999999986665565554
No 116
>PF12837 Fer4_6: 4Fe-4S binding domain; InterPro: IPR001450 This superfamily includes proteins containing domains which bind to iron-sulphur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Ferredoxins are iron-sulphur proteins that mediate electron transfer in a range of metabolic reactions; they fall into several subgroups according to the nature of their iron-sulphur cluster(s) [, ]. One group, originally found in bacteria, has been termed "bacterial-type", in which the active centre is a 4Fe-4S cluster. 4Fe-4S ferredoxins may in turn be subdivided into further groups, based on their sequence properties. Most contain at least one conserved domain, including four Cys residues that bind to a 4Fe-4S centre. ; GO: 0009055 electron carrier activity, 0051536 iron-sulfur cluster binding
Probab=78.51 E-value=0.39 Score=27.50 Aligned_cols=20 Identities=35% Similarity=1.026 Sum_probs=16.2
Q ss_pred cccccccCcCCCCCcccccc
Q 022733 134 LFVDENACIGCRECVHHASN 153 (293)
Q Consensus 134 ifvd~~~CigC~~C~~~ap~ 153 (293)
+.+|+++|++|+.|....|.
T Consensus 2 ~~id~~~C~~Cg~C~~~Cp~ 21 (24)
T PF12837_consen 2 VVIDPDKCIGCGDCVRVCPE 21 (24)
T ss_pred cEEChhhCcChhHHHHhcch
Confidence 35688999999999977663
No 117
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=71.78 E-value=9.3 Score=30.44 Aligned_cols=45 Identities=27% Similarity=0.407 Sum_probs=33.8
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCCCCc------hHHHHHHHHHHHHhhcccc
Q 022733 52 EANGQEIKEAYRKLQKKYHPDIAGQK------GHEHTLLLNEAYKVLMRGD 96 (293)
Q Consensus 52 ~as~~eIk~ayr~l~~~~HPD~~~~~------~~~~~~~i~~Ay~vL~d~~ 96 (293)
..+..+++.|.|.+-++.|||..... +++.++.|+.-.+.|..+.
T Consensus 5 ~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~~ 55 (112)
T PF14687_consen 5 NLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKRK 55 (112)
T ss_pred hhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhccC
Confidence 45678899999999999999976532 3456777777777776543
No 118
>PRK14028 pyruvate ferredoxin oxidoreductase subunit gamma/delta; Provisional
Probab=71.15 E-value=20 Score=33.36 Aligned_cols=23 Identities=26% Similarity=0.668 Sum_probs=18.5
Q ss_pred CccccccccCcCCCCCcccccce
Q 022733 132 EALFVDENACIGCRECVHHASNT 154 (293)
Q Consensus 132 ~difvd~~~CigC~~C~~~ap~t 154 (293)
....++.+.|++|+.|...+|..
T Consensus 240 ~~p~id~~~Ci~C~~C~~~CP~~ 262 (312)
T PRK14028 240 DKPVIDHSKCIMCRKCWLYCPDD 262 (312)
T ss_pred cceEECcccCcCcccccccCChh
Confidence 34456788999999999988864
No 119
>COG3383 Uncharacterized anaerobic dehydrogenase [General function prediction only]
Probab=66.76 E-value=5.1 Score=41.90 Aligned_cols=31 Identities=19% Similarity=0.280 Sum_probs=25.3
Q ss_pred eecccccCCCcceeeeeeecccceEEEEeCC
Q 022733 176 NIEVSVDSCPVNCIHWVDREELPVLEFLIQP 206 (293)
Q Consensus 176 ~iq~ac~~Cpg~Cig~~~~~e~k~LeV~Ip~ 206 (293)
.+...|..|.++|.-..-....++|.|.-.+
T Consensus 263 ktkTvC~yCGvGCsf~vwtkgreilkv~p~~ 293 (978)
T COG3383 263 KTKTVCTYCGVGCSFEVWTKGREILKVQPDP 293 (978)
T ss_pred ccceeccccCCceeEEEEecCceEEEeccCC
Confidence 4557799999999998888888888876543
No 120
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=65.54 E-value=9.3 Score=28.15 Aligned_cols=36 Identities=11% Similarity=0.175 Sum_probs=24.4
Q ss_pred ccceEEEEeCCCCCCCcEEecCCC--------CCCCceehhhHH
Q 022733 196 ELPVLEFLIQPQPKKGYGVFGGGW--------ERPANVFMAAKA 231 (293)
Q Consensus 196 e~k~LeV~Ip~G~~~G~~I~g~G~--------~~~~~vf~~~~~ 231 (293)
+-+.++|.||+|..+|+.+..+|. ...||+|+..+.
T Consensus 25 ~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V 68 (81)
T PF01556_consen 25 DGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEV 68 (81)
T ss_dssp TS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEE
T ss_pred CCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEE
Confidence 336889999999999999875552 257788887643
No 121
>PF13237 Fer4_10: 4Fe-4S dicluster domain; PDB: 2FGO_A.
Probab=62.87 E-value=6.2 Score=26.21 Aligned_cols=20 Identities=40% Similarity=1.052 Sum_probs=8.0
Q ss_pred cccccccCcCCCCCcccccc
Q 022733 134 LFVDENACIGCRECVHHASN 153 (293)
Q Consensus 134 ifvd~~~CigC~~C~~~ap~ 153 (293)
+.+|.+.|++|+.|....|.
T Consensus 2 i~id~~~C~~C~~C~~~CP~ 21 (52)
T PF13237_consen 2 IVIDEDKCIGCGRCVKVCPA 21 (52)
T ss_dssp ----TT------TTGGG-TT
T ss_pred CccCcccCcCCcChHHHccc
Confidence 56788999999999998887
No 122
>COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Energy production and conversion]
Probab=62.16 E-value=1.7 Score=37.57 Aligned_cols=63 Identities=24% Similarity=0.546 Sum_probs=33.8
Q ss_pred CCccccccccCcCCCCCcccccceeeeeCCcceEEEEEecCcccceecccccCCCcceeeeeeecc
Q 022733 131 PEALFVDENACIGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPVNCIHWVDREE 196 (293)
Q Consensus 131 ~~difvd~~~CigC~~C~~~ap~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg~Cig~~~~~e 196 (293)
..-.+++++.|+||..|...+|.--.+-...+.-.++ .+.-.....-...||++||....+.+
T Consensus 107 ~~va~i~e~~ciGCtkCiqaCpvdAivg~~~~mhtv~---~dlCTGC~lCva~CPtdci~m~~~~~ 169 (198)
T COG2878 107 RMVALIDEANCIGCTKCIQACPVDAIVGATKAMHTVI---ADLCTGCDLCVAPCPTDCIEMQPVAE 169 (198)
T ss_pred ceeeEecchhccccHHHHHhCChhhhhccchhHHHHH---HHHhcCCCcccCCCCCCceeeeeccc
Confidence 3456789999999999997665311110000000000 00000012335667999998887776
No 123
>PF00037 Fer4: 4Fe-4S binding domain; InterPro: IPR001450 This superfamily includes proteins containing domains which bind to iron-sulphur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Ferredoxins are iron-sulphur proteins that mediate electron transfer in a range of metabolic reactions; they fall into several subgroups according to the nature of their iron-sulphur cluster(s) [, ]. One group, originally found in bacteria, has been termed "bacterial-type", in which the active centre is a 4Fe-4S cluster. 4Fe-4S ferredoxins may in turn be subdivided into further groups, based on their sequence properties. Most contain at least one conserved domain, including four Cys residues that bind to a 4Fe-4S centre. ; GO: 0009055 electron carrier activity, 0051536 iron-sulfur cluster binding; PDB: 1DUR_A 1H98_A 1BD6_A 1BQX_A 1BWE_A 1BC6_A 3BK7_A 1FCA_A 1FDN_A 2FDN_A ....
Probab=59.72 E-value=2 Score=24.40 Aligned_cols=19 Identities=37% Similarity=0.955 Sum_probs=14.2
Q ss_pred ccccccCcCCCCCcccccc
Q 022733 135 FVDENACIGCRECVHHASN 153 (293)
Q Consensus 135 fvd~~~CigC~~C~~~ap~ 153 (293)
.++.+.|++|+.|....|.
T Consensus 2 ~id~~~C~~Cg~C~~~CP~ 20 (24)
T PF00037_consen 2 VIDPDKCIGCGRCVEACPF 20 (24)
T ss_dssp EEETTTSSS-THHHHHSTT
T ss_pred EEchHHCCCcchhhhhccc
Confidence 4677899999999876664
No 124
>PRK13029 2-oxoacid ferredoxin oxidoreductase; Provisional
Probab=59.58 E-value=7.1 Score=43.02 Aligned_cols=37 Identities=22% Similarity=0.463 Sum_probs=25.8
Q ss_pred CccccccccCcCCCCCcc--cccceeeeeCCcceEEEEE
Q 022733 132 EALFVDENACIGCRECVH--HASNTFVMDEATGCARVKV 168 (293)
Q Consensus 132 ~difvd~~~CigC~~C~~--~ap~tf~~c~g~G~~~v~~ 168 (293)
.-+++++..|.||+.|.. .||.+-......|..+.+.
T Consensus 650 ~r~~In~~vCeGCgdC~~~snC~ai~p~et~~grK~~Id 688 (1186)
T PRK13029 650 RRVFINELVCEGCGDCSVQSNCLAVQPVETEFGRKRKIN 688 (1186)
T ss_pred ccEEEcccccCCchhhhhccCCceeeeccccCCccEEEC
Confidence 367899999999999985 3555555555556655543
No 125
>PRK09193 indolepyruvate ferredoxin oxidoreductase; Validated
Probab=56.87 E-value=8.5 Score=42.44 Aligned_cols=36 Identities=22% Similarity=0.487 Sum_probs=25.3
Q ss_pred ccccccccCcCCCCCcc--cccceeeeeCCcceEEEEE
Q 022733 133 ALFVDENACIGCRECVH--HASNTFVMDEATGCARVKV 168 (293)
Q Consensus 133 difvd~~~CigC~~C~~--~ap~tf~~c~g~G~~~v~~ 168 (293)
-+++++..|.||+.|.. .||.+-......|..+.+.
T Consensus 637 r~~In~~vCegCgdC~~~s~C~ai~p~~t~~grK~~Id 674 (1165)
T PRK09193 637 RVFINEAVCEGCGDCSVKSNCLSVEPVETEFGRKRRID 674 (1165)
T ss_pred eEEEcccccCCchhhhhccCCcceeeccccCCccEEEC
Confidence 68899999999999985 3555545555556655443
No 126
>PRK09626 oorD 2-oxoglutarate-acceptor oxidoreductase subunit OorD; Reviewed
Probab=56.78 E-value=9.5 Score=29.51 Aligned_cols=21 Identities=33% Similarity=0.784 Sum_probs=17.5
Q ss_pred ccccccccCcCCCCCcccccc
Q 022733 133 ALFVDENACIGCRECVHHASN 153 (293)
Q Consensus 133 difvd~~~CigC~~C~~~ap~ 153 (293)
.+.++...|++|+.|...+|.
T Consensus 10 ~v~id~~~Ci~C~~Cv~aCP~ 30 (103)
T PRK09626 10 PVWVDESRCKACDICVSVCPA 30 (103)
T ss_pred CeEECcccccCCcchhhhcCh
Confidence 455688899999999998875
No 127
>COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit [Energy production and conversion]
Probab=55.78 E-value=10 Score=29.00 Aligned_cols=64 Identities=25% Similarity=0.409 Sum_probs=35.5
Q ss_pred CCCccccccccCcCCCCCcccccceeeeeCCcceEEEEEecCcccceecccccCCCcceeeeeeec
Q 022733 130 RPEALFVDENACIGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPVNCIHWVDRE 195 (293)
Q Consensus 130 r~~difvd~~~CigC~~C~~~ap~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg~Cig~~~~~ 195 (293)
+....-++.+.|+.|..|-..+|+.+......|....+.-. .---...-..-||.+||.++.++
T Consensus 26 rv~rPv~d~~kCi~C~~C~~yCPe~~i~~~~~~~~~~idYd--yCKGCGICa~vCP~kaI~Mv~E~ 89 (91)
T COG1144 26 RVFRPVVDEDKCINCKLCWLYCPEPAILEEEGGYKVRIDYD--YCKGCGICANVCPVKAIEMVREE 89 (91)
T ss_pred EEEeeEEcccccccCceeEEECCchheeeccCCccceeEcc--cccCceechhhCChhheEeEeec
Confidence 44455678999999999999999864333222221100000 00011223455788888776544
No 128
>PF04879 Molybdop_Fe4S4: Molybdopterin oxidoreductase Fe4S4 domain; InterPro: IPR006963 The molybdopterin oxidoreductase Fe4S4 domain is found in a number of reductase/dehydrogenase families, which include the periplasmic nitrate reductase precursor and the formate dehydrogenase alpha chain [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2VPZ_A 2VPY_A 2VPW_A 2VPX_A 2NYA_A 3M9S_C 2FUG_L 3IAS_L 2YBB_3 3IAM_3 ....
Probab=55.46 E-value=19 Score=24.31 Aligned_cols=33 Identities=12% Similarity=0.155 Sum_probs=22.9
Q ss_pred eecccccCCCcceeeeeeecccceEEEEeCCCC
Q 022733 176 NIEVSVDSCPVNCIHWVDREELPVLEFLIQPQP 208 (293)
Q Consensus 176 ~iq~ac~~Cpg~Cig~~~~~e~k~LeV~Ip~G~ 208 (293)
.+..+|+.|+..|.-...+...+++.|.-.+.-
T Consensus 3 ~~~t~C~~C~~gC~i~~~v~~g~i~~v~g~~~~ 35 (55)
T PF04879_consen 3 TVPTVCPYCSSGCGIDVYVKDGKIVKVEGDPDH 35 (55)
T ss_dssp EEEEE-SSCTT--EEEEEEETTEEEEEEE-TTS
T ss_pred EEeeECcCCcCCCcEEEEEecCceEEEECCCCC
Confidence 467889999999998888888888877765543
No 129
>PF12800 Fer4_4: 4Fe-4S binding domain; InterPro: IPR001450 This superfamily includes proteins containing domains which bind to iron-sulphur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Ferredoxins are iron-sulphur proteins that mediate electron transfer in a range of metabolic reactions; they fall into several subgroups according to the nature of their iron-sulphur cluster(s) [, ]. One group, originally found in bacteria, has been termed "bacterial-type", in which the active centre is a 4Fe-4S cluster. 4Fe-4S ferredoxins may in turn be subdivided into further groups, based on their sequence properties. Most contain at least one conserved domain, including four Cys residues that bind to a 4Fe-4S centre. ; GO: 0009055 electron carrier activity, 0051536 iron-sulfur cluster binding; PDB: 1BD6_A 1BQX_A 1BWE_A 1BC6_A.
Probab=54.95 E-value=9.5 Score=19.81 Aligned_cols=15 Identities=40% Similarity=1.061 Sum_probs=11.9
Q ss_pred ccCcCCCCCcccccc
Q 022733 139 NACIGCRECVHHASN 153 (293)
Q Consensus 139 ~~CigC~~C~~~ap~ 153 (293)
+.|++|+.|....|.
T Consensus 2 ~~C~~C~~C~~~Cp~ 16 (17)
T PF12800_consen 2 ERCIGCGSCVDVCPT 16 (17)
T ss_dssp CCCTTSSSSTTTSTT
T ss_pred CcCCCCchHHhhccC
Confidence 469999999877663
No 130
>PRK13030 2-oxoacid ferredoxin oxidoreductase; Provisional
Probab=53.64 E-value=10 Score=41.91 Aligned_cols=36 Identities=25% Similarity=0.489 Sum_probs=24.6
Q ss_pred ccccccccCcCCCCCcc--cccceeeeeCCcceEEEEE
Q 022733 133 ALFVDENACIGCRECVH--HASNTFVMDEATGCARVKV 168 (293)
Q Consensus 133 difvd~~~CigC~~C~~--~ap~tf~~c~g~G~~~v~~ 168 (293)
.+++++..|.||+.|.. .||.+-......|..+.+.
T Consensus 623 ~~~In~~vCegCg~C~~~s~C~ai~~~~t~~grK~~Id 660 (1159)
T PRK13030 623 RLFINEAVCEGCGDCGVQSNCLSVEPVETPFGRKRRID 660 (1159)
T ss_pred eEEEcccccCCchhhhhccCCcceeeccccCCccEEEC
Confidence 68899999999999985 3555444444456554443
No 131
>PRK09625 porD pyruvate flavodoxin oxidoreductase subunit delta; Reviewed
Probab=53.02 E-value=3.7 Score=33.57 Aligned_cols=24 Identities=21% Similarity=0.465 Sum_probs=18.8
Q ss_pred CccccccccCcCCCCCccccccee
Q 022733 132 EALFVDENACIGCRECVHHASNTF 155 (293)
Q Consensus 132 ~difvd~~~CigC~~C~~~ap~tf 155 (293)
..+.++.+.|++|+.|...+|...
T Consensus 52 ~~p~~d~~~Ci~C~~C~~~CP~~a 75 (133)
T PRK09625 52 EKPVHNNEICINCFNCWVYCPDAA 75 (133)
T ss_pred eeEEEehhHCcChhhHHHhCCHhh
Confidence 344567889999999999888654
No 132
>PRK14299 chaperone protein DnaJ; Provisional
Probab=52.72 E-value=15 Score=33.98 Aligned_cols=32 Identities=19% Similarity=0.314 Sum_probs=24.7
Q ss_pred eEEEEeCCCCCCCcEEecCCCCCC------CceehhhH
Q 022733 199 VLEFLIQPQPKKGYGVFGGGWERP------ANVFMAAK 230 (293)
Q Consensus 199 ~LeV~Ip~G~~~G~~I~g~G~~~~------~~vf~~~~ 230 (293)
.++|.||+|+..|+.+.++|.|-| ||+||..+
T Consensus 228 ~~~v~ip~~~~~g~~~rl~g~G~p~~~~~~GDL~v~~~ 265 (291)
T PRK14299 228 PVEVTIPPRTQAGRKLRLKGKGWPRGPAGRGDQYAEVR 265 (291)
T ss_pred CEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCEEEEEE
Confidence 489999999999999987665544 67776653
No 133
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=51.48 E-value=17 Score=33.97 Aligned_cols=31 Identities=13% Similarity=0.192 Sum_probs=23.7
Q ss_pred eEEEEeCCCCCCCcEEecCCCCC-----CCceehhh
Q 022733 199 VLEFLIQPQPKKGYGVFGGGWER-----PANVFMAA 229 (293)
Q Consensus 199 ~LeV~Ip~G~~~G~~I~g~G~~~-----~~~vf~~~ 229 (293)
.++|.||+|+..|++|..+|.|- .||+||..
T Consensus 236 ~v~v~ip~g~~~g~~~ri~g~G~p~~~~~GdL~v~~ 271 (306)
T PRK10266 236 SILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVL 271 (306)
T ss_pred cEEEEeCCCcCCCCEEEECCCCCCCCCCCCCEEEEE
Confidence 47999999999999997666443 36776655
No 134
>COG1146 Ferredoxin [Energy production and conversion]
Probab=51.44 E-value=20 Score=25.32 Aligned_cols=20 Identities=35% Similarity=0.828 Sum_probs=16.1
Q ss_pred ccccccCcCCCCCcccccce
Q 022733 135 FVDENACIGCRECVHHASNT 154 (293)
Q Consensus 135 fvd~~~CigC~~C~~~ap~t 154 (293)
.++.+.|++|+.|....|..
T Consensus 4 ~Id~~~C~~c~~C~~~CP~~ 23 (68)
T COG1146 4 VIDYDKCIGCGICVEVCPAG 23 (68)
T ss_pred EECchhcCCCChheeccChh
Confidence 35677899999999888864
No 135
>COG1142 HycB Fe-S-cluster-containing hydrogenase components 2 [Energy production and conversion]
Probab=50.37 E-value=13 Score=31.77 Aligned_cols=20 Identities=50% Similarity=1.004 Sum_probs=16.7
Q ss_pred ccccccccCcCCCCCccccc
Q 022733 133 ALFVDENACIGCRECVHHAS 152 (293)
Q Consensus 133 difvd~~~CigC~~C~~~ap 152 (293)
.+.++.++|+||+.|.-..|
T Consensus 76 ~v~V~~ekCiGC~~C~~aCP 95 (165)
T COG1142 76 AVQVDEEKCIGCKLCVVACP 95 (165)
T ss_pred ceEEchhhccCcchhhhcCC
Confidence 46678999999999997665
No 136
>TIGR01582 FDH-beta formate dehydrogenase, beta subunit, Fe-S containing. In addition to the gamma proteobacteria, a sequence from Aquifex aolicus falls within the scope of this model. This appears to be the case for the alpha, gamma and epsilon (accessory protein TIGR01562) chains as well.
Probab=49.66 E-value=4.9 Score=37.27 Aligned_cols=63 Identities=22% Similarity=0.351 Sum_probs=33.4
Q ss_pred cccccccCcCCCCCcccccce-eeeeCCcceEEEEEecCc-ccceecccc-cCCCcceeeeeeecc
Q 022733 134 LFVDENACIGCRECVHHASNT-FVMDEATGCARVKVQYGD-SDQNIEVSV-DSCPVNCIHWVDREE 196 (293)
Q Consensus 134 ifvd~~~CigC~~C~~~ap~t-f~~c~g~G~~~v~~q~g~-~~~~iq~ac-~~Cpg~Cig~~~~~e 196 (293)
+.++.+.|++|+.|...+|.. ..+....+....-.--.+ ......-+| ..||.+++.++..++
T Consensus 119 V~id~dkCigC~~Cv~aCP~~a~~~~~~~~~~~KC~~C~dr~~~G~~PaCv~aCP~gAi~fg~~~~ 184 (283)
T TIGR01582 119 VDFDHSKCIGCGYCIVGCPFNIPRYDKVDNRPYKCTLCIDRVSVGQEPACVKTCPTNAISFGFKED 184 (283)
T ss_pred EEEeHHHCCcchHHHhhCCCCCcEEcCCCCChhhhcccccccccCCCChHhCcccHhhEEECCHHH
Confidence 467888999999999887752 222222121100000000 000011233 889999999887654
No 137
>TIGR02060 aprB adenosine phosphosulphate reductase, beta subunit. During dissimilatory sulfate reduction and sulfur oxidation, adenylylsulfate (APS) reductase catalyzes reversibly the two-electron reduction of APS to sulfite and AMP. Found in several bacterial lineages and in Archaeoglobales, APS reductase is a heterodimer composed of an alpha subunit containing a noncovalently bound FAD, and a beta subunit containing two [4Fe-4S] clusters. Described by this model is the beta subunit of APS reductase, sharing common evolutionary origin with other iron-sulfur cluster-binding proteins.
Probab=48.51 E-value=19 Score=29.47 Aligned_cols=61 Identities=23% Similarity=0.307 Sum_probs=33.0
Q ss_pred cccccccCcCCC-----CCcccccceeeeeCCcc-eEEEEEecCcccceecccccCCCcceeeeeeecc
Q 022733 134 LFVDENACIGCR-----ECVHHASNTFVMDEATG-CARVKVQYGDSDQNIEVSVDSCPVNCIHWVDREE 196 (293)
Q Consensus 134 ifvd~~~CigC~-----~C~~~ap~tf~~c~g~G-~~~v~~q~g~~~~~iq~ac~~Cpg~Cig~~~~~e 196 (293)
++++.+.|++|+ .|...+|.....-+..+ .+..+.. ..-.....-...||.++|......+
T Consensus 3 ~~v~~~~C~gC~~~~~~~Cv~~CP~~ai~~~~~~~~~~~id~--~~C~~Cg~Cv~~CP~~AI~~~~~~~ 69 (132)
T TIGR02060 3 TFVYPTKCDGCKAGEKTACVYICPNDLMHLDTEIMKAYNIEP--DMCWECYSCVKACPQGAIDVRGYAD 69 (132)
T ss_pred CEEccccccCccCCchhcCHhhcCccceEecCCCceeeecCc--hhCccHHHHHHhCCcCceEEECccc
Confidence 467888999999 99998886432222212 1111111 1111123445566777776655444
No 138
>COG3592 Uncharacterized conserved protein [Function unknown]
Probab=47.88 E-value=3.7 Score=29.72 Aligned_cols=55 Identities=15% Similarity=0.405 Sum_probs=39.2
Q ss_pred ccccccccCcCCCCCcccccceeeeeCCcceEEEEEecCcccceecccccCCCcceeee
Q 022733 133 ALFVDENACIGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPVNCIHW 191 (293)
Q Consensus 133 difvd~~~CigC~~C~~~ap~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg~Cig~ 191 (293)
|++.+...|.--+.|+...|.+|..... --+.........++..+.+||..++..
T Consensus 17 di~fn~~iC~Hs~nCV~Gn~~vF~~~rk----PWI~Pd~~~ve~i~~vi~sCPSGAl~Y 71 (74)
T COG3592 17 DIYFNTAICAHSGNCVRGNPKVFNLGRK----PWIMPDAVDVEEIVKVIDTCPSGALKY 71 (74)
T ss_pred EEEeccceeecccceecCCHhhcccCCC----CccCCCCCCHHHHHHHHHhCCchhhhe
Confidence 6677778999999999999999876433 222222335566788899999877643
No 139
>PRK09623 vorD 2-ketoisovalerate ferredoxin oxidoreductase subunit delta; Reviewed
Probab=47.03 E-value=19 Score=27.96 Aligned_cols=21 Identities=29% Similarity=0.651 Sum_probs=17.3
Q ss_pred ccccccccCcCCCCCcccccc
Q 022733 133 ALFVDENACIGCRECVHHASN 153 (293)
Q Consensus 133 difvd~~~CigC~~C~~~ap~ 153 (293)
...++.+.|++|+.|...+|.
T Consensus 45 ~p~i~~~~Ci~C~~C~~~CP~ 65 (105)
T PRK09623 45 MPVVDESKCVKCYICWKFCPE 65 (105)
T ss_pred eEEECcccCccccchhhhCCH
Confidence 455778899999999988875
No 140
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=46.67 E-value=53 Score=24.26 Aligned_cols=30 Identities=23% Similarity=0.330 Sum_probs=24.6
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhC
Q 022733 41 KNYYELLGVSVEANGQEIKEAYRKLQKKYH 70 (293)
Q Consensus 41 ~d~Y~iLgv~~~as~~eIk~ayr~l~~~~H 70 (293)
++.-+++|++|-|+..||+.|-++..++..
T Consensus 3 RNIk~LfnfdPPAT~~EvrdAAlQfVRKlS 32 (88)
T COG5552 3 RNIKELFNFDPPATPVEVRDAALQFVRKLS 32 (88)
T ss_pred cchHHHhCCCCCCCcHHHHHHHHHHHHHhc
Confidence 456688999999999999998877766653
No 141
>PRK09624 porD pyuvate ferredoxin oxidoreductase subunit delta; Reviewed
Probab=45.04 E-value=20 Score=28.00 Aligned_cols=20 Identities=15% Similarity=0.484 Sum_probs=16.6
Q ss_pred ccccccCcCCCCCcccccce
Q 022733 135 FVDENACIGCRECVHHASNT 154 (293)
Q Consensus 135 fvd~~~CigC~~C~~~ap~t 154 (293)
.++.+.|++|+.|...+|..
T Consensus 47 ~~d~~~Ci~C~~C~~~CP~~ 66 (105)
T PRK09624 47 EFNRDKCVRCYLCYIYCPEP 66 (105)
T ss_pred EEChhHCcChhhHHhhCCHh
Confidence 46788999999999888854
No 142
>COG0437 HybA Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion]
Probab=43.83 E-value=16 Score=32.21 Aligned_cols=24 Identities=33% Similarity=0.819 Sum_probs=18.6
Q ss_pred CCccccccccCcCCCCCcccccce
Q 022733 131 PEALFVDENACIGCRECVHHASNT 154 (293)
Q Consensus 131 ~~difvd~~~CigC~~C~~~ap~t 154 (293)
.-.+++|.++|+||..|.-.+.+.
T Consensus 10 ~~~~~~D~~rCiGC~aC~~AC~~~ 33 (203)
T COG0437 10 RYAFVIDSSRCIGCKACVVACKEE 33 (203)
T ss_pred eeEEEEecccccCcHHHHHHHHHh
Confidence 346788999999999998665543
No 143
>PRK08348 NADH-plastoquinone oxidoreductase subunit; Provisional
Probab=43.67 E-value=16 Score=29.02 Aligned_cols=21 Identities=33% Similarity=0.896 Sum_probs=17.8
Q ss_pred ccccccccCcCCCCCcccccc
Q 022733 133 ALFVDENACIGCRECVHHASN 153 (293)
Q Consensus 133 difvd~~~CigC~~C~~~ap~ 153 (293)
.+.++.+.|++|+.|...+|.
T Consensus 36 ~i~i~~~~Ci~C~~C~~~CP~ 56 (120)
T PRK08348 36 KILYDVDKCVGCRMCVTVCPA 56 (120)
T ss_pred eEEECcccCcCcccHHHHCCc
Confidence 456788899999999988886
No 144
>PRK09129 NADH dehydrogenase subunit G; Validated
Probab=42.85 E-value=18 Score=38.09 Aligned_cols=33 Identities=6% Similarity=-0.046 Sum_probs=23.3
Q ss_pred ceecccccCCCcceeeeeeecccceEEEEeCCC
Q 022733 175 QNIEVSVDSCPVNCIHWVDREELPVLEFLIQPQ 207 (293)
Q Consensus 175 ~~iq~ac~~Cpg~Cig~~~~~e~k~LeV~Ip~G 207 (293)
..+...|..|+..|.-...+.+.+++.|.-.++
T Consensus 216 ~~~~t~C~~C~~gC~i~v~v~~g~i~rv~g~~~ 248 (776)
T PRK09129 216 SRRKSVSPHDSLGSNLVVHVKNNRVMRVVPREN 248 (776)
T ss_pred ccCCccCCCCCCCCCeEEEEECCEEEEeecCCC
Confidence 345678999999997666677777777764433
No 145
>PF13187 Fer4_9: 4Fe-4S dicluster domain; PDB: 2WSF_C 2WSE_C 2O01_C 2WSC_C 3LW5_C 2VKR_C 1KQG_B 1KQF_B 3GYX_J.
Probab=42.35 E-value=9.6 Score=25.46 Aligned_cols=15 Identities=40% Similarity=0.992 Sum_probs=9.9
Q ss_pred cCcCCCCCcccccce
Q 022733 140 ACIGCRECVHHASNT 154 (293)
Q Consensus 140 ~CigC~~C~~~ap~t 154 (293)
+|++|+.|....|..
T Consensus 1 kCi~Cg~C~~~CP~~ 15 (55)
T PF13187_consen 1 KCIGCGRCVEACPVG 15 (55)
T ss_dssp C--TTTHHHHHSTTT
T ss_pred CCCCcchHHHHCCcc
Confidence 488888888877764
No 146
>PRK00783 DNA-directed RNA polymerase subunit D; Provisional
Probab=42.34 E-value=19 Score=32.82 Aligned_cols=91 Identities=15% Similarity=0.256 Sum_probs=47.5
Q ss_pred ccccccccCcCCCCCcccccc-eeeeeCCcceEEEEEecCcccceecccccCCCcceeeeeeecccceEEEEeCCCCCCC
Q 022733 133 ALFVDENACIGCRECVHHASN-TFVMDEATGCARVKVQYGDSDQNIEVSVDSCPVNCIHWVDREELPVLEFLIQPQPKKG 211 (293)
Q Consensus 133 difvd~~~CigC~~C~~~ap~-tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg~Cig~~~~~e~k~LeV~Ip~G~~~G 211 (293)
.+.+ ...|.+|+.|...+|. .+.++++ ...+.. .. .-.........||.+|+........-.++|.
T Consensus 164 ~I~i-~~~C~~C~~C~~~CP~~vi~~~~~--~~~v~~-~~-~C~~C~~Ci~~CP~~AI~i~~~~~~~if~vE-------- 230 (263)
T PRK00783 164 RIEV-SEDCDECEKCVEACPRGVLELKEG--KLVVTD-LL-NCSLCKLCERACPGKAIRVSDDENKFIFTVE-------- 230 (263)
T ss_pred cccc-cccCCchHHHHHhCCccccEecCC--eEEEeC-hh-hCCCchHHHHhCCCCceEEEEcCCeEEEEec--------
Confidence 4445 6789999999998887 4555443 322221 11 0111222334467777766665543222221
Q ss_pred cEEecCCCCCCCceehh-hHHHHHHHHHHh
Q 022733 212 YGVFGGGWERPANVFMA-AKAFNKQLQQQA 240 (293)
Q Consensus 212 ~~I~g~G~~~~~~vf~~-~~~~~~~~~~~~ 240 (293)
.-|.=.|.+++.. .+.+..++++-.
T Consensus 231 ----s~G~l~p~~iv~~A~~~l~~k~~~~~ 256 (263)
T PRK00783 231 ----SDGSLPVEEILLEALKILKRKADELI 256 (263)
T ss_pred ----cCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2233345566643 366666665544
No 147
>PRK05113 electron transport complex protein RnfB; Provisional
Probab=42.17 E-value=14 Score=32.12 Aligned_cols=21 Identities=38% Similarity=1.070 Sum_probs=17.4
Q ss_pred ccccccccCcCCCCCcccccc
Q 022733 133 ALFVDENACIGCRECVHHASN 153 (293)
Q Consensus 133 difvd~~~CigC~~C~~~ap~ 153 (293)
-++++.+.|++|+.|...+|.
T Consensus 108 ~~~id~~~Ci~Cg~Cv~aCp~ 128 (191)
T PRK05113 108 VAFIDEDNCIGCTKCIQACPV 128 (191)
T ss_pred eeEEeCCcCCCCChhhhhCCH
Confidence 356788999999999988874
No 148
>PRK13409 putative ATPase RIL; Provisional
Probab=41.83 E-value=13 Score=38.01 Aligned_cols=20 Identities=35% Similarity=0.853 Sum_probs=16.8
Q ss_pred ccccccccCcCCCCCccccc
Q 022733 133 ALFVDENACIGCRECVHHAS 152 (293)
Q Consensus 133 difvd~~~CigC~~C~~~ap 152 (293)
..++.++.|+||+.|+..+|
T Consensus 43 ~~~~~e~~c~~c~~c~~~cp 62 (590)
T PRK13409 43 KPVISEELCIGCGICVKKCP 62 (590)
T ss_pred CceeeHhhccccccccccCC
Confidence 45678899999999998766
No 149
>PRK06991 ferredoxin; Provisional
Probab=41.10 E-value=12 Score=34.37 Aligned_cols=20 Identities=35% Similarity=0.876 Sum_probs=16.6
Q ss_pred cccccccCcCCCCCcccccc
Q 022733 134 LFVDENACIGCRECVHHASN 153 (293)
Q Consensus 134 ifvd~~~CigC~~C~~~ap~ 153 (293)
+.++...|++|+.|...+|.
T Consensus 80 ~~id~~~CigCg~Cv~aCP~ 99 (270)
T PRK06991 80 AVIDEQLCIGCTLCMQACPV 99 (270)
T ss_pred eEEccccCCCCcHHHHhCCH
Confidence 35678899999999988874
No 150
>TIGR03048 PS_I_psaC photosystem I iron-sulfur protein PsaC. Members of this family are PsaC, an essential component of photosystem I (PS-I) reaction center in Cyanobacteria and chloroplasts. This small protein, about 80 amino acids in length, contains two copies of the ferredoxin-like 4Fe-4S binding site (pfam00037) and therefore eight conserved Cys residues. This protein is also called photosystem I subunit VII.
Probab=41.09 E-value=13 Score=27.23 Aligned_cols=20 Identities=30% Similarity=0.730 Sum_probs=15.8
Q ss_pred cccccccCcCCCCCcccccc
Q 022733 134 LFVDENACIGCRECVHHASN 153 (293)
Q Consensus 134 ifvd~~~CigC~~C~~~ap~ 153 (293)
+......|++|+.|...+|.
T Consensus 3 ~~~~~~~Ci~C~~Cv~~CP~ 22 (80)
T TIGR03048 3 SVKIYDTCIGCTQCVRACPT 22 (80)
T ss_pred ceecCCcCcCcchHHHHCCc
Confidence 34456789999999998884
No 151
>TIGR03149 cyt_nit_nrfC cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase.
Probab=41.09 E-value=9.9 Score=33.89 Aligned_cols=25 Identities=32% Similarity=0.756 Sum_probs=20.2
Q ss_pred ccccccccCcCCCCCcccccceeee
Q 022733 133 ALFVDENACIGCRECVHHASNTFVM 157 (293)
Q Consensus 133 difvd~~~CigC~~C~~~ap~tf~~ 157 (293)
.+++|.+.|++|+.|...++.....
T Consensus 40 ~~~iD~~rCigC~~C~~aC~~~~~~ 64 (225)
T TIGR03149 40 GMVHDETACIGCTACMDACREVNKV 64 (225)
T ss_pred EEEEEHHHCcCcHHHHHHhhHHhCC
Confidence 4778999999999999888765433
No 152
>PF14697 Fer4_21: 4Fe-4S dicluster domain; PDB: 2WSF_C 2WSE_C 2O01_C 2WSC_C 3LW5_C 1H7X_C 1H7W_A 1GT8_A 1GTE_B 1GTH_B ....
Probab=40.76 E-value=20 Score=24.92 Aligned_cols=18 Identities=39% Similarity=0.875 Sum_probs=9.3
Q ss_pred ccccccCcCCCCCccccc
Q 022733 135 FVDENACIGCRECVHHAS 152 (293)
Q Consensus 135 fvd~~~CigC~~C~~~ap 152 (293)
.++.+.|+||+.|....|
T Consensus 35 ~v~~~~C~GCg~C~~~CP 52 (59)
T PF14697_consen 35 PVNPDKCIGCGLCVKVCP 52 (59)
T ss_dssp ECE-TT--S-SCCCCCSS
T ss_pred EeccccCcCcCcccccCC
Confidence 345667888888876655
No 153
>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion]
Probab=40.69 E-value=18 Score=37.07 Aligned_cols=27 Identities=30% Similarity=0.664 Sum_probs=20.4
Q ss_pred CccccccccCcCCCCCc--ccccceeeee
Q 022733 132 EALFVDENACIGCRECV--HHASNTFVMD 158 (293)
Q Consensus 132 ~difvd~~~CigC~~C~--~~ap~tf~~c 158 (293)
..++||++.|.||+.|. ..+|..+...
T Consensus 570 ~~~~Vd~~~CtGC~~C~~~~~Cpsi~~~~ 598 (640)
T COG4231 570 PKYFVDEEKCTGCGDCIVLSGCPSIEPDP 598 (640)
T ss_pred CCceechhhcCCcHHHHhhcCCceEeecC
Confidence 46889999999999998 3456555444
No 154
>CHL00065 psaC photosystem I subunit VII
Probab=38.79 E-value=12 Score=27.41 Aligned_cols=18 Identities=33% Similarity=0.848 Sum_probs=14.7
Q ss_pred cccccCcCCCCCcccccc
Q 022733 136 VDENACIGCRECVHHASN 153 (293)
Q Consensus 136 vd~~~CigC~~C~~~ap~ 153 (293)
++.+.|++|+.|....|.
T Consensus 6 ~~~~~Ci~Cg~C~~~CP~ 23 (81)
T CHL00065 6 KIYDTCIGCTQCVRACPT 23 (81)
T ss_pred CccccCCChhHHHHHCCc
Confidence 345689999999988884
No 155
>TIGR00403 ndhI NADH-plastoquinone oxidoreductase subunit I protein.
Probab=37.83 E-value=23 Score=30.51 Aligned_cols=22 Identities=23% Similarity=0.620 Sum_probs=17.8
Q ss_pred ccccccccCcCCCCCcccccce
Q 022733 133 ALFVDENACIGCRECVHHASNT 154 (293)
Q Consensus 133 difvd~~~CigC~~C~~~ap~t 154 (293)
.+.++.+.|++|+.|...+|..
T Consensus 56 ~i~~~~~kCi~Cg~C~~aCP~~ 77 (183)
T TIGR00403 56 RIHFEFDKCIACEVCVRVCPIN 77 (183)
T ss_pred eEEeCcccCcCcCChhhhCCCC
Confidence 3556778999999999988864
No 156
>TIGR03224 benzo_boxA benzoyl-CoA oxygenase/reductase, BoxA protein. Members of this protein family are BoxA, the A component of the BoxAB benzoyl-CoA oxygenase/reductase. This oxygen-requiring enzyme acts in an aerobic pathway of benzoate catabolism via coenzyme A ligation. BoxA is a homodimeric iron-sulphur-flavoprotein and acts as an NADPH-dependent reductase for BoxB.
Probab=37.00 E-value=20 Score=34.90 Aligned_cols=22 Identities=23% Similarity=0.626 Sum_probs=17.2
Q ss_pred ccccccccCcCCCCCcccccce
Q 022733 133 ALFVDENACIGCRECVHHASNT 154 (293)
Q Consensus 133 difvd~~~CigC~~C~~~ap~t 154 (293)
.+.++.+.|++|+.|...+|..
T Consensus 4 ~~~id~~~Ci~C~~C~~~CP~~ 25 (411)
T TIGR03224 4 QHLIDPEICIRCNTCEETCPID 25 (411)
T ss_pred eeeeCcccCcCccchhhhCCcc
Confidence 4566788899999999888754
No 157
>PRK02651 photosystem I subunit VII; Provisional
Probab=36.99 E-value=22 Score=25.82 Aligned_cols=16 Identities=38% Similarity=0.995 Sum_probs=13.8
Q ss_pred cccCcCCCCCcccccc
Q 022733 138 ENACIGCRECVHHASN 153 (293)
Q Consensus 138 ~~~CigC~~C~~~ap~ 153 (293)
.+.|++|+.|...+|.
T Consensus 8 ~~~Ci~C~~C~~~CP~ 23 (81)
T PRK02651 8 YDTCIGCTQCVRACPL 23 (81)
T ss_pred cccCCCcchHHHHCCc
Confidence 4689999999998884
No 158
>PRK08318 dihydropyrimidine dehydrogenase subunit B; Validated
Probab=36.64 E-value=29 Score=33.70 Aligned_cols=19 Identities=32% Similarity=0.901 Sum_probs=16.0
Q ss_pred ccccccCcCCCCCcccccc
Q 022733 135 FVDENACIGCRECVHHASN 153 (293)
Q Consensus 135 fvd~~~CigC~~C~~~ap~ 153 (293)
.++.+.|++|+.|...+|.
T Consensus 338 ~~~~~~C~~C~~C~~~Cp~ 356 (420)
T PRK08318 338 RIDQDKCIGCGRCYIACED 356 (420)
T ss_pred EECHHHCCCCCcccccCCC
Confidence 3567899999999988884
No 159
>PLN00071 photosystem I subunit VII; Provisional
Probab=36.57 E-value=18 Score=26.39 Aligned_cols=18 Identities=33% Similarity=0.848 Sum_probs=15.0
Q ss_pred cccccCcCCCCCcccccc
Q 022733 136 VDENACIGCRECVHHASN 153 (293)
Q Consensus 136 vd~~~CigC~~C~~~ap~ 153 (293)
+..+.|++|+.|....|.
T Consensus 6 ~~~~~C~~C~~C~~~CP~ 23 (81)
T PLN00071 6 KIYDTCIGCTQCVRACPT 23 (81)
T ss_pred EcCCcCcChhHHHHHCCc
Confidence 455689999999998885
No 160
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=36.31 E-value=1.7e+02 Score=21.76 Aligned_cols=54 Identities=19% Similarity=0.102 Sum_probs=35.7
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHH----HHHHHHHHhhcc
Q 022733 41 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHT----LLLNEAYKVLMR 94 (293)
Q Consensus 41 ~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~~-~~~~~----~~i~~Ay~vL~d 94 (293)
++--.+.|+.|-+|.+||..|-.+..++..=-..|.. +.+.| ..|..+-..|.|
T Consensus 3 RnI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps~an~eaF~~AV~eva~at~~LL~ 61 (78)
T PF10041_consen 3 RNIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPSAANAEAFDRAVAEVAAATRRLLD 61 (78)
T ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 3445677899999999999998888888754444433 23333 345555555554
No 161
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=35.22 E-value=49 Score=26.88 Aligned_cols=39 Identities=21% Similarity=0.268 Sum_probs=32.8
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC
Q 022733 38 SKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ 76 (293)
Q Consensus 38 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD~~~~ 76 (293)
++-...-.||+|++..+.++|-+.|..|=....+.+++.
T Consensus 56 iTlqEa~qILnV~~~ln~eei~k~yehLFevNdkskGGS 94 (132)
T KOG3442|consen 56 ITLQEAQQILNVKEPLNREEIEKRYEHLFEVNDKSKGGS 94 (132)
T ss_pred ccHHHHhhHhCCCCCCCHHHHHHHHHHHHhccCcccCcc
Confidence 444455779999999999999999999999887777765
No 162
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=34.51 E-value=30 Score=16.93 Aligned_cols=13 Identities=23% Similarity=0.245 Sum_probs=9.1
Q ss_pred HHHHHHHHHHhhc
Q 022733 81 HTLLLNEAYKVLM 93 (293)
Q Consensus 81 ~~~~i~~Ay~vL~ 93 (293)
.|..+..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 3667788888764
No 163
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=34.36 E-value=14 Score=36.81 Aligned_cols=18 Identities=39% Similarity=0.997 Sum_probs=15.7
Q ss_pred ccccccCcCCCCCccccc
Q 022733 135 FVDENACIGCRECVHHAS 152 (293)
Q Consensus 135 fvd~~~CigC~~C~~~ap 152 (293)
++.++.|+||+.|+..+|
T Consensus 46 vIsE~lCiGCGICvkkCP 63 (591)
T COG1245 46 VISEELCIGCGICVKKCP 63 (591)
T ss_pred eeEhhhhccchhhhccCC
Confidence 677899999999998776
No 164
>TIGR03478 DMSO_red_II_bet DMSO reductase family type II enzyme, iron-sulfur subunit. This model represents the iron-sulfur subunit, typically called the beta subunit, of various proteins that also contain a molybdopterin subunit and a heme b subunit. The group includes two distinct but very closely related periplasmic proteins of anaerobic respiration, selenate reductase and chlorate reductase. Other members of this family include dimethyl sulphide dehydrogenase and ethylbenzene dehydrogenase.
Probab=33.69 E-value=12 Score=35.42 Aligned_cols=48 Identities=21% Similarity=0.349 Sum_probs=0.0
Q ss_pred cccccccCcCCCCCcccccc-------------eeeee-----CCcceEEEEEecCcccceecccccCCCcceeeeeeec
Q 022733 134 LFVDENACIGCRECVHHASN-------------TFVMD-----EATGCARVKVQYGDSDQNIEVSVDSCPVNCIHWVDRE 195 (293)
Q Consensus 134 ifvd~~~CigC~~C~~~ap~-------------tf~~c-----~g~G~~~v~~q~g~~~~~iq~ac~~Cpg~Cig~~~~~ 195 (293)
+.++.+.|++|+.|...+|. .|.+| .| ....-...||+.++..+..+
T Consensus 157 V~ID~ekCiGCg~Cv~ACPygAi~~n~~~~~~eKC~~C~~Rie~G---------------~~PaCv~aCP~~A~~fGdld 221 (321)
T TIGR03478 157 VLVDQERCKGYRYCVEACPYKKVYFNPQSQKSEKCIGCYPRIEKG---------------IAPACVKQCPGRIRFVGYLD 221 (321)
T ss_pred EEECHHHCcchHHHHHhCCCCCcEecCCCCchhhCCCchhhhccC---------------CCCHHHhhcCcccEEEEeCC
Q ss_pred c
Q 022733 196 E 196 (293)
Q Consensus 196 e 196 (293)
+
T Consensus 222 d 222 (321)
T TIGR03478 222 D 222 (321)
T ss_pred C
No 165
>PRK09477 napH quinol dehydrogenase membrane component; Provisional
Probab=32.54 E-value=45 Score=30.48 Aligned_cols=19 Identities=26% Similarity=0.760 Sum_probs=16.1
Q ss_pred cccccCcCCCCCcccccce
Q 022733 136 VDENACIGCRECVHHASNT 154 (293)
Q Consensus 136 vd~~~CigC~~C~~~ap~t 154 (293)
++.+.|++|+.|...+|..
T Consensus 205 ~d~~~C~~C~~C~~~CP~~ 223 (271)
T PRK09477 205 HDRQKCTRCMDCFHVCPEP 223 (271)
T ss_pred CCcccCcccCCcCCcCCCc
Confidence 6788999999999888753
No 166
>PTZ00305 NADH:ubiquinone oxidoreductase; Provisional
Probab=32.52 E-value=71 Score=29.86 Aligned_cols=62 Identities=24% Similarity=0.381 Sum_probs=33.5
Q ss_pred cccccccCcCCCCCcccccce-----eeeeCCcce-EEEEEecCccc---ceecccccCCCcceeeeeeecc
Q 022733 134 LFVDENACIGCRECVHHASNT-----FVMDEATGC-ARVKVQYGDSD---QNIEVSVDSCPVNCIHWVDREE 196 (293)
Q Consensus 134 ifvd~~~CigC~~C~~~ap~t-----f~~c~g~G~-~~v~~q~g~~~---~~iq~ac~~Cpg~Cig~~~~~e 196 (293)
+.++.++||-|+.|+..+.++ ..+ .+.|. .++....+... .......+.||++++..+...+
T Consensus 207 i~~D~nKCIlCgRCVRaC~EVqg~~aL~~-~~RG~~t~I~t~~d~~~~~~~~~g~cvdvCPvGAL~~~d~~~ 277 (297)
T PTZ00305 207 TRVVLNRCIHCTRCVRFLNEHAQDFNLGM-IGRGGLSEISTFLDELEVKTDNNMPVSQLCPVGKLYLGDADE 277 (297)
T ss_pred eeecCCcCcCccHHHHHHHHhhCCcEEEE-eecCCCCEEeecCCCcccccCCCCceeeECCCcccccCCccc
Confidence 456788999999999765542 122 12232 22322222211 1112234789998886665554
No 167
>PRK10882 hydrogenase 2 protein HybA; Provisional
Probab=32.21 E-value=20 Score=34.03 Aligned_cols=20 Identities=30% Similarity=0.798 Sum_probs=16.1
Q ss_pred cccccccCcCCCCCcccccc
Q 022733 134 LFVDENACIGCRECVHHASN 153 (293)
Q Consensus 134 ifvd~~~CigC~~C~~~ap~ 153 (293)
+.++.+.|++|+.|...+|.
T Consensus 138 V~id~dkCigCg~Cv~aCP~ 157 (328)
T PRK10882 138 VHYDKDVCTGCRYCMVACPF 157 (328)
T ss_pred ccCCHHHcCcccHHHHhCCc
Confidence 45677899999999987774
No 168
>TIGR02179 PorD_KorD 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family. A number of anaerobic and microaerophilic species lack pyruvate dehydrogenase and have instead a four subunit, oxygen-sensitive pyruvate oxidoreductase, with either ferredoxins or flavodoxins used as the acceptor. Several related four-subunit enzymes may exist in the same species. This model describes a subfamily of delta subunits, representing mostly pyruvate, 2-ketoisovalerate, and 2-oxoglutarate specific enzymes. The delta subunit is the smallest and resembles ferredoxins.
Probab=31.60 E-value=40 Score=24.18 Aligned_cols=21 Identities=29% Similarity=0.676 Sum_probs=16.7
Q ss_pred cccccccCcCCCCCcccccce
Q 022733 134 LFVDENACIGCRECVHHASNT 154 (293)
Q Consensus 134 ifvd~~~CigC~~C~~~ap~t 154 (293)
+.++.+.|++|+.|....|..
T Consensus 20 ~~i~~~~C~~C~~C~~~Cp~~ 40 (78)
T TIGR02179 20 PVVDKEKCIKCKNCWLYCPEG 40 (78)
T ss_pred EEEcCCcCcChhHHHhhcCcc
Confidence 356778999999999877753
No 169
>PRK05888 NADH dehydrogenase subunit I; Provisional
Probab=31.39 E-value=35 Score=28.64 Aligned_cols=17 Identities=29% Similarity=0.794 Sum_probs=13.9
Q ss_pred cccCcCCCCCcccccce
Q 022733 138 ENACIGCRECVHHASNT 154 (293)
Q Consensus 138 ~~~CigC~~C~~~ap~t 154 (293)
.+.|++|+.|...+|..
T Consensus 57 ~~~Ci~C~~C~~~CP~~ 73 (164)
T PRK05888 57 EERCIACKLCAAICPAD 73 (164)
T ss_pred CccCCcccChHHHcCcc
Confidence 34899999999888853
No 170
>PRK15449 ferredoxin-like protein FixX; Provisional
Probab=31.38 E-value=19 Score=27.83 Aligned_cols=21 Identities=19% Similarity=0.460 Sum_probs=17.2
Q ss_pred CccccccccCcCCCCCccccc
Q 022733 132 EALFVDENACIGCRECVHHAS 152 (293)
Q Consensus 132 ~difvd~~~CigC~~C~~~ap 152 (293)
..+.++.+.|++|+.|...++
T Consensus 54 G~V~vd~e~CigCg~C~~~C~ 74 (95)
T PRK15449 54 GSVRFDYAGCLECGTCRILGL 74 (95)
T ss_pred CCEEEcCCCCCcchhhhhhcC
Confidence 357788999999999997664
No 171
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=30.56 E-value=56 Score=19.29 Aligned_cols=17 Identities=18% Similarity=0.411 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHhhCC
Q 022733 55 GQEIKEAYRKLQKKYHP 71 (293)
Q Consensus 55 ~~eIk~ayr~l~~~~HP 71 (293)
.++.|.+.|+.++.||-
T Consensus 10 ~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYHE 26 (28)
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 47788999999999993
No 172
>PRK08493 NADH dehydrogenase subunit G; Validated
Probab=30.43 E-value=30 Score=36.91 Aligned_cols=55 Identities=15% Similarity=0.308 Sum_probs=33.8
Q ss_pred cccCcCCCCCcccccceeeeeCCcceEEEEEecCcccceecccccCCCcceeeeeeecc
Q 022733 138 ENACIGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVSVDSCPVNCIHWVDREE 196 (293)
Q Consensus 138 ~~~CigC~~C~~~ap~tf~~c~g~G~~~v~~q~g~~~~~iq~ac~~Cpg~Cig~~~~~e 196 (293)
...|+.||.|+..+|.---.....-. ..+.| ....+..+|+.|++.|.-...+.+
T Consensus 203 ~~~C~~CG~Cv~VCPvGAL~~k~~~~--~~~~w--el~~v~TvCp~CsvGC~l~v~vk~ 257 (819)
T PRK08493 203 TLDCSFCGECIAVCPVGALSSSDFQY--TSNAW--ELKKIPATCPHCSDCCLIYYDVKH 257 (819)
T ss_pred cccccccCcHHHhCCCCccccCcccc--ccCcc--ccccccCcCCCCccCCCeEEEccC
Confidence 45899999999988863322221110 01111 223567889999999986655543
No 173
>TIGR02951 DMSO_dmsB DMSO reductase, iron-sulfur subunit. This family consists of the iron-sulfur subunit, or chain B, of an enzyme called the anaerobic dimethyl sulfoxide reductase. Chains A and B are catalytic, while chain C is a membrane anchor.
Probab=30.17 E-value=23 Score=29.57 Aligned_cols=21 Identities=29% Similarity=0.912 Sum_probs=17.1
Q ss_pred ccccccccCcCCCCCcccccc
Q 022733 133 ALFVDENACIGCRECVHHASN 153 (293)
Q Consensus 133 difvd~~~CigC~~C~~~ap~ 153 (293)
.+++|.++|+||+.|....+.
T Consensus 3 ~~~~d~~~C~gC~~C~~aC~~ 23 (161)
T TIGR02951 3 GFYVDQTRCSGCKTCQIACKD 23 (161)
T ss_pred EEEEEcccCcCchHHHHHHHH
Confidence 367899999999999876653
No 174
>COG1148 HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion]
Probab=30.15 E-value=35 Score=34.39 Aligned_cols=32 Identities=25% Similarity=0.617 Sum_probs=22.0
Q ss_pred ccccccCcCCCCCccccccee--eeeCCcceEEEE
Q 022733 135 FVDENACIGCRECVHHASNTF--VMDEATGCARVK 167 (293)
Q Consensus 135 fvd~~~CigC~~C~~~ap~tf--~~c~g~G~~~v~ 167 (293)
||+ +.|.+|+.|...+|-.- .++.|.|..+.+
T Consensus 221 yVd-d~CtgCg~C~~vCPve~~nefn~Gl~~~kAi 254 (622)
T COG1148 221 YVD-DKCTGCGACSEVCPVEVPNEFNEGLGKRKAI 254 (622)
T ss_pred ccc-ccccccccccccCCcccCcccccccccceee
Confidence 566 89999999998887532 344566655443
No 175
>TIGR01971 NuoI NADH-quinone oxidoreductase, chain I. This model represents the I subunit (one of 14: A-N) of the NADH-quinone oxidoreductase complex I which generally couples NADH and ubiquinone oxidation/reduction in bacteria and mammalian mitochondria, but may act on NADPH and/or plastoquinone in cyanobacteria and plant chloroplasts. This model excludes "I" subunits from the closely related F420H2 dehydrogenase and formate hydrogenlyase complexes.
Probab=28.94 E-value=40 Score=26.49 Aligned_cols=15 Identities=33% Similarity=0.899 Sum_probs=13.5
Q ss_pred ccCcCCCCCcccccc
Q 022733 139 NACIGCRECVHHASN 153 (293)
Q Consensus 139 ~~CigC~~C~~~ap~ 153 (293)
+.|++|+.|...+|.
T Consensus 43 ~~Ci~C~~C~~~CP~ 57 (122)
T TIGR01971 43 EKCIGCTLCAAVCPA 57 (122)
T ss_pred CcCcCcchhhhhcCH
Confidence 789999999998884
No 176
>COG2879 Uncharacterized small protein [Function unknown]
Probab=28.84 E-value=93 Score=22.23 Aligned_cols=26 Identities=23% Similarity=0.175 Sum_probs=17.9
Q ss_pred HHHHHHHhhCCCCCCCchHHHHHHHH
Q 022733 61 AYRKLQKKYHPDIAGQKGHEHTLLLN 86 (293)
Q Consensus 61 ayr~l~~~~HPD~~~~~~~~~~~~i~ 86 (293)
.|-.-+++.|||+.+-.-.+.|+.-.
T Consensus 27 nYVehmr~~hPd~p~mT~~EFfrec~ 52 (65)
T COG2879 27 NYVEHMRKKHPDKPPMTYEEFFRECQ 52 (65)
T ss_pred HHHHHHHHhCcCCCcccHHHHHHHHH
Confidence 46677889999998655556665433
No 177
>PRK07569 bidirectional hydrogenase complex protein HoxU; Validated
Probab=28.82 E-value=29 Score=31.01 Aligned_cols=22 Identities=27% Similarity=0.673 Sum_probs=17.8
Q ss_pred CccccccccCcCCCCCcccccc
Q 022733 132 EALFVDENACIGCRECVHHASN 153 (293)
Q Consensus 132 ~difvd~~~CigC~~C~~~ap~ 153 (293)
..+.++.++|++|+.|...++.
T Consensus 139 ~~i~~d~~kCi~Cg~Cv~aC~~ 160 (234)
T PRK07569 139 PRFGIDHNRCVLCTRCVRVCDE 160 (234)
T ss_pred CcEEeehhhCcCccHHHHHHHH
Confidence 3456788999999999987774
No 178
>PRK13984 putative oxidoreductase; Provisional
Probab=28.79 E-value=26 Score=35.71 Aligned_cols=20 Identities=30% Similarity=0.677 Sum_probs=16.5
Q ss_pred cccccccCcCCCCCcccccc
Q 022733 134 LFVDENACIGCRECVHHASN 153 (293)
Q Consensus 134 ifvd~~~CigC~~C~~~ap~ 153 (293)
+++|.+.|++|+.|...+|.
T Consensus 40 ~~~d~~~Ci~C~~C~~~Cp~ 59 (604)
T PRK13984 40 HINDWEKCIGCGTCSKICPT 59 (604)
T ss_pred cccChhhCcCccchhhhCCc
Confidence 34578899999999998884
No 179
>TIGR02163 napH_ ferredoxin-type protein, NapH/MauN family. Most members of this family are the NapH protein, found next to NapG,in operons that encode the periplasmic nitrate reductase. Some species with this reductase lack NapC but accomplish electron transfer to NapAB in some other manner, likely to involve NapH, NapG, and/or some other protein. A few members of this protein are designated MauN and are found in methylamine utilization operons in species that appear to lack a periplasmic nitrate reductase.
Probab=26.29 E-value=35 Score=30.91 Aligned_cols=18 Identities=22% Similarity=0.780 Sum_probs=15.0
Q ss_pred ccccCcCCCCCcccccce
Q 022733 137 DENACIGCRECVHHASNT 154 (293)
Q Consensus 137 d~~~CigC~~C~~~ap~t 154 (293)
+.+.|++|+.|...+|..
T Consensus 199 ~~~~C~~C~~C~~vCP~~ 216 (255)
T TIGR02163 199 DREKCTNCMDCFNVCPEP 216 (255)
T ss_pred ccccCeEcCCccCcCCCC
Confidence 378999999999888753
No 180
>TIGR01944 rnfB electron transport complex, RnfABCDGE type, B subunit. The six subunit complex RnfABCDGE in Rhodobacter capsulatus encodes an apparent NADH oxidoreductase responsible for electron transport to nitrogenase, necessary for nitrogen fixation. A closely related complex in E. coli, RsxABCDGE (Reducer of SoxR), reduces the 2Fe-2S-containing superoxide sensor SoxR, active as a transcription factor when oxidized. This family of putative NADH oxidoreductase complexes exists in many of the same species as the related NQR, a Na(+)-translocating NADH-quinone reductase, but is distinct. This model describes the B subunit.
Probab=26.24 E-value=35 Score=28.81 Aligned_cols=21 Identities=33% Similarity=0.991 Sum_probs=17.3
Q ss_pred ccccccccCcCCCCCcccccc
Q 022733 133 ALFVDENACIGCRECVHHASN 153 (293)
Q Consensus 133 difvd~~~CigC~~C~~~ap~ 153 (293)
-.+++.+.|++|+.|...+|.
T Consensus 107 ~~~id~~~Ci~Cg~C~~aCp~ 127 (165)
T TIGR01944 107 VALIDEDNCIGCTKCIQACPV 127 (165)
T ss_pred eEEEECCcCCChhHHHHhCCc
Confidence 356788899999999988774
No 181
>TIGR01973 NuoG NADH-quinone oxidoreductase, chain G. This model represents the G subunit (one of 14: A-N) of the NADH-quinone oxidoreductase complex I which generally couples NADH and ubiquinone oxidation/reduction in bacteria and mammalian mitochondria while translocating protons, but may act on NADPH and/or plastoquinone in cyanobacteria and plant chloroplasts. This model excludes related subunits from formate dehydrogenase complexes.
Probab=25.72 E-value=34 Score=34.98 Aligned_cols=64 Identities=17% Similarity=0.283 Sum_probs=0.0
Q ss_pred CCCCccccccccCcCCCCCcccccc-----eeeeeCCcceEEEEEecCc--ccceecccccCCCcceeeee
Q 022733 129 PRPEALFVDENACIGCRECVHHASN-----TFVMDEATGCARVKVQYGD--SDQNIEVSVDSCPVNCIHWV 192 (293)
Q Consensus 129 ~r~~difvd~~~CigC~~C~~~ap~-----tf~~c~g~G~~~v~~q~g~--~~~~iq~ac~~Cpg~Cig~~ 192 (293)
.....+..|.++||-|+.|+..+.+ .+.+-+-....++....+. .-...-...+-||++++..+
T Consensus 132 ~~~p~i~~d~~rCI~C~rCvr~c~e~~g~~~l~~~~rg~~~~i~~~~~~~~~~~~cg~cv~vCP~GAl~~k 202 (603)
T TIGR01973 132 YLGPLIKTEMTRCIHCTRCVRFANEVAGVEDLGVIGRGNNVEIGTYEGKTLESELSGNLIDICPVGALTSK 202 (603)
T ss_pred CCCCCeEecCCcCccccHHHHHHHHhhCCceEEEeccCCCCEEecCCCCCCCCcccCChHhhCCccccccc
No 182
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=25.29 E-value=40 Score=34.45 Aligned_cols=46 Identities=22% Similarity=0.174 Sum_probs=29.7
Q ss_pred CcCCCCCccccc----ceeeeeCCcceEEEEEecCcccceecc-cccCCCc
Q 022733 141 CIGCRECVHHAS----NTFVMDEATGCARVKVQYGDSDQNIEV-SVDSCPV 186 (293)
Q Consensus 141 CigC~~C~~~ap----~tf~~c~g~G~~~v~~q~g~~~~~iq~-ac~~Cpg 186 (293)
-+.|..|.+.+. .+|..|+|.|.+..-..-|.....-+. .|+.|..
T Consensus 53 ~~pc~~c~gkG~V~v~~~c~~c~G~gkv~~c~~cG~~~~~~~~~lc~~c~~ 103 (715)
T COG1107 53 EIPCPKCRGKGTVTVYDTCPECGGTGKVLTCDICGDIIVPWEEGLCPECRR 103 (715)
T ss_pred CCCCCeeccceeEEEEeecccCCCceeEEeeccccceecCcccccChhHhh
Confidence 467777777654 478999999887665555554333222 4777754
No 183
>TIGR00402 napF ferredoxin-type protein NapF. The gene codes for a ferredoxin-type cytosolic protein, NapF, of the periplasmic nitrate reductase system, as in Escherichia coli. NapF interacts with the catalytic subunit, NapA, and may be an accessory protein for NapA maturation.
Probab=25.09 E-value=1e+02 Score=23.55 Aligned_cols=18 Identities=28% Similarity=0.674 Sum_probs=14.6
Q ss_pred cccccCcCCCCCcccccc
Q 022733 136 VDENACIGCRECVHHASN 153 (293)
Q Consensus 136 vd~~~CigC~~C~~~ap~ 153 (293)
+..+.|++|+.|....|.
T Consensus 31 ~~~~~C~~C~~C~~~CP~ 48 (101)
T TIGR00402 31 LFSAVCTRCGECASACEN 48 (101)
T ss_pred cCcCcCcChhHHHHHcCc
Confidence 445689999999988775
No 184
>PRK07860 NADH dehydrogenase subunit G; Validated
Probab=24.92 E-value=74 Score=33.84 Aligned_cols=28 Identities=18% Similarity=0.311 Sum_probs=20.6
Q ss_pred ceecccccCCCcceeeeeeecccceEEE
Q 022733 175 QNIEVSVDSCPVNCIHWVDREELPVLEF 202 (293)
Q Consensus 175 ~~iq~ac~~Cpg~Cig~~~~~e~k~LeV 202 (293)
..+...|..|+..|.-...+.+.+++.+
T Consensus 222 ~~~~SvC~~C~~GC~l~v~v~dg~ivrv 249 (797)
T PRK07860 222 VSTPSVCEHCASGCAQRTDHRRGKVLRR 249 (797)
T ss_pred eecceeCCCCCCCCCeEEEEcCCEEEEE
Confidence 4566789999999987777766665544
No 185
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=23.87 E-value=57 Score=28.38 Aligned_cols=27 Identities=19% Similarity=0.198 Sum_probs=19.2
Q ss_pred CcCCCCCccccc-----ceeeeeCCcceEEEE
Q 022733 141 CIGCRECVHHAS-----NTFVMDEATGCARVK 167 (293)
Q Consensus 141 CigC~~C~~~ap-----~tf~~c~g~G~~~v~ 167 (293)
-..|..|.|++. ..|..|.|.|....+
T Consensus 99 ~~~C~~C~G~G~~i~~~~~C~~C~G~G~v~~~ 130 (186)
T TIGR02642 99 SCKCPRCRGTGLIQRRQRECDTCAGTGRFRPT 130 (186)
T ss_pred CCcCCCCCCeeEEecCCCCCCCCCCccEEeee
Confidence 456777776653 469999999987654
No 186
>COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion]
Probab=23.36 E-value=1.3e+02 Score=27.86 Aligned_cols=20 Identities=25% Similarity=0.622 Sum_probs=14.9
Q ss_pred ccccccccCcCCCCCccccc
Q 022733 133 ALFVDENACIGCRECVHHAS 152 (293)
Q Consensus 133 difvd~~~CigC~~C~~~ap 152 (293)
-..++.+.|+.|+.|...++
T Consensus 63 ~p~i~~e~C~~CG~C~~vC~ 82 (284)
T COG1149 63 IPEIDPEKCIRCGKCAEVCR 82 (284)
T ss_pred ccccChhhccccCcHHHhCC
Confidence 34467778999999996554
No 187
>PHA03051 Hypothetical protein; Provisional
Probab=22.30 E-value=31 Score=25.14 Aligned_cols=26 Identities=19% Similarity=0.240 Sum_probs=20.2
Q ss_pred hhhhhhhhhhcccCCCCCCcccceec
Q 022733 4 AMVLSYHHVSGYVNPNKSSLSVIRCC 29 (293)
Q Consensus 4 ~~~~s~~~~~~~~~~~~~~~~~~~~~ 29 (293)
.|..-+||||++|.++.++.+.+...
T Consensus 17 ~~~nnqhhfsnify~nnsrcplfksl 42 (88)
T PHA03051 17 HICNNQHHFSNIFYGNNSRCPLFKSL 42 (88)
T ss_pred HHHccccceeeeEecCCccChhHHHH
Confidence 35566899999999999987765544
No 188
>TIGR02700 flavo_MJ0208 archaeoflavoprotein, MJ0208 family. This model describes one of two paralogous families of archaealflavoprotein. The other, described by TIGR02699 and typified by the partially characterized AF1518 of Archaeoglobus fulgidus, is a homodimeric FMN-containing flavoprotein that accepts electrons from ferredoxin and can transfer them to various oxidoreductases. The function of this protein family is unknown.
Probab=22.19 E-value=47 Score=29.67 Aligned_cols=20 Identities=30% Similarity=0.825 Sum_probs=16.8
Q ss_pred cccccccCcCCCCCcccccc
Q 022733 134 LFVDENACIGCRECVHHASN 153 (293)
Q Consensus 134 ifvd~~~CigC~~C~~~ap~ 153 (293)
+.++.+.|++|+.|...+|.
T Consensus 143 ~~id~~~C~~C~~C~~~CP~ 162 (234)
T TIGR02700 143 YMIDRKRCKGCGICVDACPR 162 (234)
T ss_pred eEEChhHCcCcchHHHhCCc
Confidence 45678899999999988875
No 189
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=21.84 E-value=80 Score=25.46 Aligned_cols=40 Identities=15% Similarity=-0.013 Sum_probs=26.8
Q ss_pred cccccCCC--ccee----eeeeecccceEEEEeCCCCCCCcEEecC
Q 022733 178 EVSVDSCP--VNCI----HWVDREELPVLEFLIQPQPKKGYGVFGG 217 (293)
Q Consensus 178 q~ac~~Cp--g~Ci----g~~~~~e~k~LeV~Ip~G~~~G~~I~g~ 217 (293)
+.+|..|. +.|. ..........+++.-+.+.+.|+.|...
T Consensus 16 ~saC~~C~~~~~Cg~~~~~~~~~~~~~~~~~~~~~~~~~GD~V~v~ 61 (135)
T PF04246_consen 16 SSACGSCSASGGCGTGLLAKLFSGKPITFRAPNPIGAKVGDRVEVE 61 (135)
T ss_pred CCcCcccCCCCCCCcchhhhhcCCCcEEEEecCCCCCCCCCEEEEE
Confidence 46688887 3576 2223334457777788999999998543
No 190
>PRK08166 NADH dehydrogenase subunit G; Validated
Probab=21.75 E-value=1.3e+02 Score=32.28 Aligned_cols=118 Identities=12% Similarity=0.085 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHhhccccccccccccccccccccccccCCCCCCCCCCCCCCCCccc
Q 022733 56 QEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFGTNASAGFSRSSWKGPPRPEALF 135 (293)
Q Consensus 56 ~eIk~ayr~l~~~~HPD~~~~~~~~~~~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~~~~~~~~~~~gp~r~~dif 135 (293)
.+.++.-..+.+..||--.+-=....-=.|++-..-+.....|..+......... ....+.
T Consensus 85 ~~~r~~~~e~ll~~hp~dc~~c~~~g~c~lq~~~~~~g~~~~~~~~~~~~~~~~~-------------------~~~~i~ 145 (847)
T PRK08166 85 KAFRASVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQD-------------------LGPFIS 145 (847)
T ss_pred HHHHHHHHHHHHhcCCCCCCccCCCCCchHHHHHHHhCCCCccCCCcCccccccC-------------------CCCceE
Q ss_pred cccccCcCCCCCcccccc-----eeeeeCCcceEEEEEecCc--ccceecccccCCCcceeeee
Q 022733 136 VDENACIGCRECVHHASN-----TFVMDEATGCARVKVQYGD--SDQNIEVSVDSCPVNCIHWV 192 (293)
Q Consensus 136 vd~~~CigC~~C~~~ap~-----tf~~c~g~G~~~v~~q~g~--~~~~iq~ac~~Cpg~Cig~~ 192 (293)
.|.++||.|+.|+..+.+ .+.+-+-.....+....+. .-.......+-||++++..+
T Consensus 146 ~d~~rCi~C~rCVr~c~e~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~G~cv~vCP~GAl~~k 209 (847)
T PRK08166 146 HEMNRCIACYRCVRYYKDYAGGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEVCPTGVFTDK 209 (847)
T ss_pred ecCCcCccccHHHHHHHhhcCcceEEEeecCceeEecCCCCCcccChhhCChHhhCCchhcccc
No 191
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=20.98 E-value=55 Score=33.52 Aligned_cols=11 Identities=18% Similarity=0.184 Sum_probs=6.0
Q ss_pred eeeeeCCcceE
Q 022733 154 TFVMDEATGCA 164 (293)
Q Consensus 154 tf~~c~g~G~~ 164 (293)
+|..|.|.|..
T Consensus 20 ~c~vc~gtG~~ 30 (715)
T COG1107 20 ECPVCHGTGFS 30 (715)
T ss_pred ecccccccccc
Confidence 45555555543
No 192
>PRK07860 NADH dehydrogenase subunit G; Validated
Probab=20.43 E-value=44 Score=35.52 Aligned_cols=59 Identities=19% Similarity=0.446 Sum_probs=32.6
Q ss_pred ccccccccCcCCCCCcccccce-----eeeeCCcc-eEEEEEecCc-cc-ceecccccCCCcceeeee
Q 022733 133 ALFVDENACIGCRECVHHASNT-----FVMDEATG-CARVKVQYGD-SD-QNIEVSVDSCPVNCIHWV 192 (293)
Q Consensus 133 difvd~~~CigC~~C~~~ap~t-----f~~c~g~G-~~~v~~q~g~-~~-~~iq~ac~~Cpg~Cig~~ 192 (293)
.+..|.++||-|+.|+..+.++ ..+- +.| ...+....+. .. ...-...+-||++++..+
T Consensus 144 ~i~~d~~rCI~C~rCvr~c~ev~g~~~l~~~-~rg~~~~i~~~~~~~~~~~~cG~cv~vCP~GAl~~k 210 (797)
T PRK07860 144 QVLLDRERCVLCARCTRFSDQIAGDPFIDLQ-ERGALQQVGIYEGEPFQSYFSGNTVQICPVGALTGA 210 (797)
T ss_pred ceeecccccccCcHHHHHHHhhcCCcEEEee-ecCCCCEEecCCCCCcCccccCCchhhCCccccccc
Confidence 4667889999999999766542 1211 122 2222222221 11 223455677899777544
Done!