Your job contains 1 sequence.
>022734
MGSYNVLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNL
FSRWGDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKF
ETIHQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFN
SYSLSLLVLFHFQTCVPAILPPLKDIYPGNLVDDLKGVRANAERQIAEICAFNIARFSSD
KYRKINRSSLAHLFVSFLEKVFIPVMFFLLIFAGNAKCSLDESRMLLYSLMFL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022734
(293 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2063937 - symbol:HESO1 "HEN1 suppressor 1" spe... 885 1.2e-88 1
TAIR|locus:2102709 - symbol:AT3G45750 "AT3G45750" species... 343 2.2e-30 1
TAIR|locus:2102714 - symbol:AT3G45760 species:3702 "Arabi... 320 1.1e-28 1
UNIPROTKB|Q2HJ44 - symbol:PAPD4 "Poly(A) RNA polymerase G... 216 5.5e-17 1
MGI|MGI:2140950 - symbol:Papd4 "PAP associated domain con... 216 5.5e-17 1
DICTYBASE|DDB_G0278425 - symbol:DDB_G0278425 species:4468... 218 1.4e-16 1
UNIPROTKB|Q6PIY7 - symbol:PAPD4 "Poly(A) RNA polymerase G... 212 7.4e-16 1
RGD|1306438 - symbol:Papd4 "PAP associated domain contain... 212 7.4e-16 1
FB|FBgn0260780 - symbol:wisp "wispy" species:7227 "Drosop... 214 1.0e-15 1
UNIPROTKB|F1RF43 - symbol:PAPD4 "Uncharacterized protein"... 211 1.1e-15 1
SGD|S000005475 - symbol:PAP2 "Non-canonical poly(A) polym... 211 1.7e-15 1
POMBASE|SPBC1685.06 - symbol:cid11 "poly(A) polymerase Ci... 207 6.1e-15 1
FB|FBgn0038934 - symbol:Gld2 species:7227 "Drosophila mel... 207 3.3e-14 1
UNIPROTKB|Q641A1 - symbol:papd4-a "Poly(A) RNA polymerase... 200 7.1e-14 1
RGD|1586015 - symbol:Zcchc6 "zinc finger, CCHC domain con... 205 7.6e-14 1
TAIR|locus:2043669 - symbol:AT2G45620 species:3702 "Arabi... 201 1.1e-13 1
UNIPROTKB|E2RQN5 - symbol:PAPD4 "Uncharacterized protein"... 198 1.2e-13 1
DICTYBASE|DDB_G0281431 - symbol:DDB_G0281431 "Terminal ur... 198 3.6e-13 1
UNIPROTKB|I3L9X5 - symbol:ZCCHC11 "Uncharacterized protei... 196 9.2e-13 1
UNIPROTKB|E9PKY2 - symbol:ZCCHC11 "Terminal uridylyltrans... 196 9.5e-13 1
UNIPROTKB|E1C6A7 - symbol:ZCCHC11 "Uncharacterized protei... 197 9.6e-13 1
UNIPROTKB|F1MCY7 - symbol:ZCCHC11 "Uncharacterized protei... 197 1.0e-12 1
ZFIN|ZDB-GENE-050522-536 - symbol:papd4 "PAP associated d... 190 1.3e-12 1
UNIPROTKB|F1PFM0 - symbol:ZCCHC11 "Uncharacterized protei... 196 1.4e-12 1
UNIPROTKB|Q5TAX3 - symbol:ZCCHC11 "Terminal uridylyltrans... 196 1.4e-12 1
MGI|MGI:2445126 - symbol:Zcchc11 "zinc finger, CCHC domai... 196 1.4e-12 1
UNIPROTKB|J9P9X1 - symbol:ZCCHC11 "Uncharacterized protei... 196 1.4e-12 1
MGI|MGI:2387179 - symbol:Zcchc6 "zinc finger, CCHC domain... 195 1.6e-12 1
WB|WBGene00003499 - symbol:mut-2 species:6239 "Caenorhabd... 186 3.2e-12 1
UNIPROTKB|Q5VYS8 - symbol:ZCCHC6 "Terminal uridylyltransf... 192 3.9e-12 1
UNIPROTKB|E2RM29 - symbol:ZCCHC6 "Uncharacterized protein... 192 3.9e-12 1
UNIPROTKB|J9P044 - symbol:ZCCHC6 "Uncharacterized protein... 192 4.1e-12 1
UNIPROTKB|E1BAR2 - symbol:ZCCHC6 "Uncharacterized protein... 191 5.4e-12 1
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 193 5.5e-12 1
UNIPROTKB|F1S6H9 - symbol:ZCCHC11 "Uncharacterized protei... 190 6.3e-12 1
UNIPROTKB|K7GM92 - symbol:ZCCHC6 "Uncharacterized protein... 190 7.0e-12 1
UNIPROTKB|F1RPX0 - symbol:TUT1 "Uncharacterized protein" ... 167 1.1e-11 2
UNIPROTKB|F1MG03 - symbol:TUT1 "Speckle targeted PIP5K1A-... 166 1.4e-11 2
UNIPROTKB|Q1JPD6 - symbol:TUT1 "Speckle targeted PIP5K1A-... 166 1.4e-11 2
UNIPROTKB|H3BRB1 - symbol:MIR3654 "Protein MIR3654" speci... 160 2.3e-11 2
WB|WBGene00001596 - symbol:gld-2 species:6239 "Caenorhabd... 184 2.6e-11 1
UNIPROTKB|O17087 - symbol:gld-2 "Poly(A) RNA polymerase g... 184 2.6e-11 1
UNIPROTKB|F1S4J1 - symbol:ZCCHC6 "Uncharacterized protein... 185 2.9e-11 1
SGD|S000005243 - symbol:TRF5 "Non-canonical poly(A) polym... 180 3.6e-11 1
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 185 4.8e-11 1
POMBASE|SPAC17H9.01 - symbol:cid16 "poly(A) polymerase Ci... 180 8.8e-11 1
UNIPROTKB|D2HS90 - symbol:TUT1 "Speckle targeted PIP5K1A-... 161 9.2e-11 2
UNIPROTKB|Q9H6E5 - symbol:TUT1 "Speckle targeted PIP5K1A-... 160 9.9e-11 2
UNIPROTKB|F5H0R1 - symbol:TUT1 "Speckle targeted PIP5K1A-... 160 1.1e-10 2
UNIPROTKB|Q2KEW4 - symbol:MGCH7_ch7g922 "Putative unchara... 180 1.1e-10 1
UNIPROTKB|F1NBW0 - symbol:MTPAP "Uncharacterized protein"... 163 1.3e-10 2
CGD|CAL0005626 - symbol:orf19.429 species:5476 "Candida a... 174 1.7e-10 1
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 181 2.9e-10 1
POMBASE|SPAC19D5.03 - symbol:cid1 "poly(A) polymerase Cid... 169 3.0e-10 1
WB|WBGene00019629 - symbol:cid-1 species:6239 "Caenorhabd... 175 4.1e-10 1
ZFIN|ZDB-GENE-050706-68 - symbol:tut1 "terminal uridylyl ... 159 4.2e-10 2
WB|WBGene00009284 - symbol:F31C3.2 species:6239 "Caenorha... 172 4.4e-10 1
MGI|MGI:1917294 - symbol:Tut1 "terminal uridylyl transfer... 154 1.0e-09 2
UNIPROTKB|A9JTS5 - symbol:tut1 "Speckle targeted PIP5K1A-... 142 1.4e-09 2
RGD|1561043 - symbol:Tut1 "terminal uridylyl transferase ... 150 1.5e-09 2
DICTYBASE|DDB_G0295737 - symbol:DDB_G0295737 "PAP/25A-ass... 168 1.6e-09 1
UNIPROTKB|F6X6U9 - symbol:MIR3654 "Uncharacterized protei... 147 2.3e-09 2
UNIPROTKB|E2R634 - symbol:TUT1 "Uncharacterized protein" ... 147 2.7e-09 2
UNIPROTKB|E2RCU9 - symbol:MTPAP "Uncharacterized protein"... 148 2.9e-09 2
UNIPROTKB|Q9NVV4 - symbol:MTPAP "Poly(A) RNA polymerase, ... 151 4.1e-09 2
MGI|MGI:1914690 - symbol:Mtpap "mitochondrial poly(A) pol... 148 1.5e-08 2
POMBASE|SPAC821.04c - symbol:cid13 "poly(A) polymerase Ci... 155 2.5e-08 1
UNIPROTKB|F1MSM5 - symbol:MTPAP "Uncharacterized protein"... 155 2.5e-08 1
DICTYBASE|DDB_G0271962 - symbol:DDB_G0271962 species:4468... 153 3.0e-08 1
RGD|1310900 - symbol:Mtpap "mitochondrial poly(A) polymer... 146 3.3e-08 2
UNIPROTKB|G4NER0 - symbol:MGG_00073 "DNA polymerase sigma... 152 7.4e-08 1
TAIR|locus:2164047 - symbol:AT5G53770 "AT5G53770" species... 150 8.2e-08 1
UNIPROTKB|F1NYJ2 - symbol:LOC100857368 "Uncharacterized p... 152 1.7e-07 1
UNIPROTKB|F1NJM6 - symbol:LOC100857368 "Uncharacterized p... 152 1.9e-07 1
WB|WBGene00018390 - symbol:F43E2.1 species:6239 "Caenorha... 134 4.4e-06 1
DICTYBASE|DDB_G0289529 - symbol:DDB_G0289529 species:4468... 136 1.4e-05 1
ASPGD|ASPL0000029878 - symbol:cutB species:162425 "Emeric... 130 2.2e-05 1
TAIR|locus:2078426 - symbol:AT3G56320 species:3702 "Arabi... 129 2.4e-05 1
WB|WBGene00014115 - symbol:gld-4 species:6239 "Caenorhabd... 129 3.7e-05 1
FB|FBgn0035889 - symbol:mkg-p "monkey king protein" speci... 126 5.9e-05 1
UNIPROTKB|E9PKX1 - symbol:ZCCHC11 "Terminal uridylyltrans... 127 6.8e-05 1
TAIR|locus:2061868 - symbol:AT2G40520 "AT2G40520" species... 119 0.00024 1
>TAIR|locus:2063937 [details] [associations]
symbol:HESO1 "HEN1 suppressor 1" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016779
"nucleotidyltransferase activity" evidence=IDA] [GO:0071076 "RNA 3'
uridylation" evidence=IMP] GO:GO:0005634 GO:GO:0005737
EMBL:CP002685 GO:GO:0071076 GO:GO:0016779 UniGene:At.21484
UniGene:At.37137 EMBL:BT015881 EMBL:BT020198 IPI:IPI00527276
RefSeq:NP_181504.2 ProteinModelPortal:Q5XET5 SMR:Q5XET5
IntAct:Q5XET5 PRIDE:Q5XET5 EnsemblPlants:AT2G39740.1 GeneID:818559
KEGG:ath:AT2G39740 TAIR:At2g39740 InParanoid:Q5XET5 OMA:VEDPFEQ
PhylomeDB:Q5XET5 ProtClustDB:CLSN2681710 Genevestigator:Q5XET5
Uniprot:Q5XET5
Length = 511
Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
Identities = 173/254 (68%), Positives = 208/254 (81%)
Query: 7 LEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGD 66
L+P L++IL ++ P R D +TR+ VI LR+V++SVE LRGATV+PFGSFVSNLF+RWGD
Sbjct: 7 LDPTLQEILQVIKPTRADRDTRITVIDQLRDVLQSVECLRGATVQPFGSFVSNLFTRWGD 66
Query: 67 LDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQN 126
LDIS++L +GS I GKK KQ+LLG LLRALR G + +LQFV HARVPILK + HQ
Sbjct: 67 LDISVDLFSGSSILFTGKKQKQTLLGHLLRALRASGLWYKLQFVIHARVPILKVVSGHQR 126
Query: 127 ISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSL 186
ISCDISIDNL G +KS+FLFWIS+IDGRFRD+VLLVKEWAKAH+IN+ KTGTFNSYSLSL
Sbjct: 127 ISCDISIDNLDGLLKSRFLFWISEIDGRFRDLVLLVKEWAKAHNINDSKTGTFNSYSLSL 186
Query: 187 LVLFHFQTCVPAILPPLKDIYPGNLVDDLKGVRANAERQIAEICAFNIARFSSDKYRKIN 246
LV+FHFQTCVPAILPPL+ IYP + VDDL GVR AE IA++ A NIARF S++ + +N
Sbjct: 187 LVIFHFQTCVPAILPPLRVIYPKSAVDDLTGVRKTAEESIAQVTAANIARFKSERAKSVN 246
Query: 247 RSSLAHLFVSFLEK 260
RSSL+ L VSF K
Sbjct: 247 RSSLSELLVSFFAK 260
>TAIR|locus:2102709 [details] [associations]
symbol:AT3G45750 "AT3G45750" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GO:GO:0016740 eggNOG:COG5260
EMBL:BT008622 EMBL:AK229682 IPI:IPI00523946 RefSeq:NP_190161.2
UniGene:At.35992 ProteinModelPortal:Q7Y216 SMR:Q7Y216
EnsemblPlants:AT3G45750.1 GeneID:823717 KEGG:ath:AT3G45750
TAIR:At3g45750 InParanoid:Q7Y216 OMA:WREEERY PhylomeDB:Q7Y216
ProtClustDB:CLSN2680887 ArrayExpress:Q7Y216 Genevestigator:Q7Y216
Uniprot:Q7Y216
Length = 682
Score = 343 (125.8 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 79/214 (36%), Positives = 125/214 (58%)
Query: 7 LEPILKDILGMLNPLREDWETRMKVISDLREVVESV--ESLRGATV-EPFGSFVSNLFSR 63
L+ +L D+ P+ D+ TR +++ +L + + +S + V E +GSFV +++S
Sbjct: 43 LDKVLNDVYCSFRPVSADYNTRKELVKNLNTMALDIYGKSEESSPVLEAYGSFVMDMYSS 102
Query: 64 WGDLDISIELSNGSCISSAGKKVK-QSLLGDLLRALRQKGGYRRLQFVAHARVPILKFET 122
DLD+SI NG+ KK++ LR+L+ +G + ++ + A+VPI+KF
Sbjct: 103 QSDLDVSINFGNGTSEIPREKKLEILKRFAKKLRSLQGEGQVKNVESIFSAKVPIVKFSD 162
Query: 123 IHQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSY 182
+ CD+S++N G + S+ + ISQIDGRF+ + LLVK WAKAH++N+ T NS
Sbjct: 163 QGTGVECDLSVENKDGILNSQIVRIISQIDGRFQKLCLLVKHWAKAHEVNSALHRTLNSV 222
Query: 183 SLSLLVLFHFQTCVPAILPP----LKD-IYPGNL 211
S++LLV H QT P ILPP LKD + P N+
Sbjct: 223 SITLLVALHLQTQNPPILPPFSMLLKDGMDPPNV 256
>TAIR|locus:2102714 [details] [associations]
symbol:AT3G45760 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP002686 GO:GO:0016740 IPI:IPI00532663 RefSeq:NP_190162.4
UniGene:At.53771 ProteinModelPortal:F4J6R3 SMR:F4J6R3
EnsemblPlants:AT3G45760.1 GeneID:823719 KEGG:ath:AT3G45760
OMA:NTMSIAS Uniprot:F4J6R3
Length = 474
Score = 320 (117.7 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 72/205 (35%), Positives = 115/205 (56%)
Query: 7 LEPILKDILGMLNPLREDWETRMKVISDLREVVESV--ESLRGATV-EPFGSFVSNLFSR 63
L+ +L D P+ D+ TR +++ +L + + +S + V E +GSF N FS
Sbjct: 43 LDKVLDDAYSSFRPVSADYNTRKELVKNLNAMAIDIFGKSEESSPVLEAYGSFAMNTFSS 102
Query: 64 WGDLDISIELSNGSCISSAGKKVK-QSLLGDLLRALRQKGGYRRLQFVAHARVPILKFET 122
DLD+SI S+G+ KK++ + LR+L +G R + + ARVPI++F
Sbjct: 103 QKDLDVSINFSSGTSEFYREKKLEILTRFATKLRSLEGQGFVRNVVPILSARVPIVRFCD 162
Query: 123 IHQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSY 182
I CD+++++ G + S+ + ISQID RF+ + LL+K WA+AH +NN T NS
Sbjct: 163 QGTGIECDLTVESKDGILTSQIIRIISQIDDRFQKLCLLIKHWARAHGVNNASHNTLNSI 222
Query: 183 SLSLLVLFHFQTCVPAILPPLKDIY 207
S+++LV H QT P ILPP ++
Sbjct: 223 SITMLVAHHLQTQSPPILPPFSTLF 247
>UNIPROTKB|Q2HJ44 [details] [associations]
symbol:PAPD4 "Poly(A) RNA polymerase GLD2" species:9913
"Bos taurus" [GO:0071044 "histone mRNA catabolic process"
evidence=ISS] [GO:0043631 "RNA polyadenylation" evidence=ISS]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] Pfam:PF03828 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006397
GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 KO:K14079
HOVERGEN:HBG097533 EMBL:BT025394 EMBL:BC113319 IPI:IPI00702849
IPI:IPI00843674 RefSeq:NP_001039826.1 UniGene:Bt.92095
ProteinModelPortal:Q2HJ44 STRING:Q2HJ44 PRIDE:Q2HJ44
Ensembl:ENSBTAT00000008885 Ensembl:ENSBTAT00000048886 GeneID:533862
KEGG:bta:533862 CTD:167153 HOGENOM:HOG000088606 InParanoid:Q2HJ44
OMA:NQKTEAR OrthoDB:EOG4P2Q22 NextBio:20876175 Uniprot:Q2HJ44
Length = 484
Score = 216 (81.1 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 52/159 (32%), Positives = 86/159 (54%)
Query: 54 GSFVSNLFSRWGDLDISIELSNGSCISSAGKKVKQSLLGDLLR---ALRQKGGYRRLQFV 110
GS ++ +R D D+ + + C +K + + L+ R G R Q +
Sbjct: 201 GSSLNGFGTRSSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSGYIERPQLI 260
Query: 111 AHARVPILKFETIHQNISCDISIDNLCGQIKSKFLF-WISQIDGRFRDMVLLVKEWAKAH 169
A+VPI+KF + D++++N+ G I++ FL + ++ R R +VL++K+WA H
Sbjct: 261 -RAKVPIVKFRDKVSCVEFDLNVNNIVG-IRNTFLLRTYAYLENRVRPLVLVIKKWASHH 318
Query: 170 DINNPKTGTFNSYSLSLLVLFHFQTCVPAILPPLKDIYP 208
DIN+ GT +SYSL L+VL + QT ILP ++ IYP
Sbjct: 319 DINDASRGTLSSYSLVLMVLHYLQTLPEPILPSIQKIYP 357
>MGI|MGI:2140950 [details] [associations]
symbol:Papd4 "PAP associated domain containing 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071044 "histone
mRNA catabolic process" evidence=ISO] MGI:MGI:2140950 Pfam:PF03828
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 GO:GO:0043631 GeneTree:ENSGT00550000074490
KO:K14079 HOVERGEN:HBG097533 CTD:167153 HOGENOM:HOG000088606
OMA:NQKTEAR OrthoDB:EOG4P2Q22 ChiTaRS:PAPD4 EMBL:AM419011
EMBL:BC016629 EMBL:AK033141 IPI:IPI00130216 IPI:IPI00896066
RefSeq:NP_598666.1 UniGene:Mm.242865 ProteinModelPortal:Q91YI6
SMR:Q91YI6 STRING:Q91YI6 PhosphoSite:Q91YI6 PRIDE:Q91YI6
DNASU:100715 Ensembl:ENSMUST00000048702 GeneID:100715
KEGG:mmu:100715 UCSC:uc007rkz.1 UCSC:uc007rla.1 InParanoid:Q91YI6
NextBio:354606 Bgee:Q91YI6 Genevestigator:Q91YI6 Uniprot:Q91YI6
Length = 484
Score = 216 (81.1 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 62/210 (29%), Positives = 102/210 (48%)
Query: 54 GSFVSNLFSRWGDLDISIELSNGSCISSAGKKVKQSLLGDLLR---ALRQKGGYRRLQFV 110
GS ++ +R D D+ + + C +K + + L+ R G R Q +
Sbjct: 201 GSSLNGFGARSSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSGYIERPQLI 260
Query: 111 AHARVPILKFETIHQNISCDISIDNLCGQIKSKFLF-WISQIDGRFRDMVLLVKEWAKAH 169
A+VPI+KF + D++++N G I++ FL + ++ R R +VL++K+WA H
Sbjct: 261 -RAKVPIVKFRDKVSCVEFDLNVNNTVG-IRNTFLLRTYAYLENRVRPLVLVIKKWASHH 318
Query: 170 DINNPKTGTFNSYSLSLLVLFHFQTCVPAILPPLKDIYPGNLVDDLKGVRANAERQIAEI 229
DIN+ GT +SYSL L+VL + QT ILP L+ IYP + + + +
Sbjct: 319 DINDASRGTLSSYSLVLMVLHYLQTLPEPILPSLQKIYP-------ESFSTSVQLHLVHH 371
Query: 230 CAFNIARFSSDKYRKINRSSLAHLFVSFLE 259
N+ + S N SSL L + FL+
Sbjct: 372 APCNVPPYLSK-----NESSLGDLLLGFLK 396
>DICTYBASE|DDB_G0278425 [details] [associations]
symbol:DDB_G0278425 species:44689 "Dictyostelium
discoideum" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909
dictyBase:DDB_G0278425 Pfam:PF03828 EMBL:AAFI02000023
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0016779 RefSeq:XP_642359.1
EnsemblProtists:DDB0205447 GeneID:8621564 KEGG:ddi:DDB_G0278425
InParanoid:Q54Y43 OMA:TEESINT Uniprot:Q54Y43
Length = 1090
Score = 218 (81.8 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 57/185 (30%), Positives = 97/185 (52%)
Query: 26 ETRMK-VISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSAGK 84
E R K ++ L+ +V + G + FGS + + + GD+DI + + SS G
Sbjct: 770 ENRGKSLLIRLQNLVSKIFPNSGVKLHLFGSSANGMSLKNGDIDICMVIDQ----SSEGT 825
Query: 85 KVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKSKF 144
++ + L + + G++++ + ARVPI+KF+ + +SCDI ++N ++
Sbjct: 826 S---DVIIERLAEMLKINGFQKILAIPTARVPIVKFKDPNTGLSCDICMNNRLAIYNTRL 882
Query: 145 LFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAILPPLK 204
+ S ID R + +V +VK WAK IN P GT +SY+ LV+ QT P ILP L+
Sbjct: 883 VQDYSMIDERMKPLVYVVKRWAKRRKINEPSLGTLSSYAYINLVISFLQTRQPPILPCLQ 942
Query: 205 DIYPG 209
++ G
Sbjct: 943 ELANG 947
>UNIPROTKB|Q6PIY7 [details] [associations]
symbol:PAPD4 "Poly(A) RNA polymerase GLD2" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IDA]
[GO:0031380 "nuclear RNA-directed RNA polymerase complex"
evidence=IC] [GO:0043631 "RNA polyadenylation" evidence=IDA]
[GO:0071044 "histone mRNA catabolic process" evidence=IMP]
Pfam:PF03828 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 EMBL:CH471084 GO:GO:0071044 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 GO:GO:0031380 GO:GO:0043631
KO:K14079 HOVERGEN:HBG097533 CTD:167153 HOGENOM:HOG000088606
OMA:NQKTEAR EMBL:AK095818 EMBL:BC026061 EMBL:BC047581
IPI:IPI00167560 IPI:IPI00895778 RefSeq:NP_001107865.1
RefSeq:NP_001107866.1 RefSeq:NP_776158.2 UniGene:Hs.418198
HSSP:Q86MV5 ProteinModelPortal:Q6PIY7 SMR:Q6PIY7 IntAct:Q6PIY7
STRING:Q6PIY7 PhosphoSite:Q6PIY7 DMDM:74737798 PaxDb:Q6PIY7
PRIDE:Q6PIY7 Ensembl:ENST00000296783 Ensembl:ENST00000423041
Ensembl:ENST00000428308 Ensembl:ENST00000453514 GeneID:167153
KEGG:hsa:167153 UCSC:uc003kga.2 UCSC:uc003kgb.2
GeneCards:GC05P078944 HGNC:HGNC:26776 MIM:614121 neXtProt:NX_Q6PIY7
PharmGKB:PA134918975 InParanoid:Q6PIY7 PhylomeDB:Q6PIY7
ChiTaRS:PAPD4 GenomeRNAi:167153 NextBio:88659 ArrayExpress:Q6PIY7
Bgee:Q6PIY7 CleanEx:HS_PAPD4 Genevestigator:Q6PIY7 Uniprot:Q6PIY7
Length = 484
Score = 212 (79.7 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 52/159 (32%), Positives = 85/159 (53%)
Query: 54 GSFVSNLFSRWGDLDISIELSNGSCISSAGKKVKQSLLGDLLR---ALRQKGGYRRLQFV 110
GS ++ +R D D+ + + C +K + + L+ R G R Q +
Sbjct: 201 GSSLNGFGTRSSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSGYIERPQLI 260
Query: 111 AHARVPILKFETIHQNISCDISIDNLCGQIKSKFLF-WISQIDGRFRDMVLLVKEWAKAH 169
A+VPI+KF + D++++N+ G I++ FL + ++ R R +VL++K+WA H
Sbjct: 261 -RAKVPIVKFRDKVSCVEFDLNVNNIVG-IRNTFLLRTYAYLENRVRPLVLVIKKWASHH 318
Query: 170 DINNPKTGTFNSYSLSLLVLFHFQTCVPAILPPLKDIYP 208
IN+ GT +SYSL L+VL + QT ILP L+ IYP
Sbjct: 319 QINDASRGTLSSYSLVLMVLHYLQTLPEPILPSLQKIYP 357
>RGD|1306438 [details] [associations]
symbol:Papd4 "PAP associated domain containing 4" species:10116
"Rattus norvegicus" [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISO;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=ISO;ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0071044 "histone mRNA
catabolic process" evidence=ISO;ISS] Pfam:PF03828 RGD:1306438
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 GO:GO:0043631 GeneTree:ENSGT00550000074490
KO:K14079 HOVERGEN:HBG097533 CTD:167153 HOGENOM:HOG000088606
OMA:NQKTEAR OrthoDB:EOG4P2Q22 EMBL:BC085771 IPI:IPI00372891
RefSeq:NP_001008373.1 UniGene:Rn.98477 ProteinModelPortal:Q5U315
STRING:Q5U315 Ensembl:ENSRNOT00000016135 GeneID:361878
KEGG:rno:361878 UCSC:RGD:1306438 InParanoid:Q5U315 NextBio:677940
Genevestigator:Q5U315 Uniprot:Q5U315
Length = 484
Score = 212 (79.7 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 61/210 (29%), Positives = 102/210 (48%)
Query: 54 GSFVSNLFSRWGDLDISIELSNGSCISSAGKKVKQSLLGDLLR---ALRQKGGYRRLQFV 110
GS ++ +R D D+ + + C +K + + L+ R G R Q +
Sbjct: 201 GSSLNGFGARSSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSGYIERPQLI 260
Query: 111 AHARVPILKFETIHQNISCDISIDNLCGQIKSKFLF-WISQIDGRFRDMVLLVKEWAKAH 169
A+VPI+KF + D++++N G I++ FL + ++ R R +VL++K+WA H
Sbjct: 261 -RAKVPIVKFRDKVSCVEFDLNVNNTVG-IRNTFLLRTYAYLENRVRPLVLVIKKWASHH 318
Query: 170 DINNPKTGTFNSYSLSLLVLFHFQTCVPAILPPLKDIYPGNLVDDLKGVRANAERQIAEI 229
+IN+ GT +SYSL L+VL + QT ILP L+ IYP + + + +
Sbjct: 319 EINDASRGTLSSYSLVLMVLHYLQTLPEPILPSLQKIYP-------ESFSTSVQLHLVHH 371
Query: 230 CAFNIARFSSDKYRKINRSSLAHLFVSFLE 259
N+ + S N SSL L + FL+
Sbjct: 372 APCNVPPYLSK-----NESSLGDLLLGFLK 396
>FB|FBgn0260780 [details] [associations]
symbol:wisp "wispy" species:7227 "Drosophila melanogaster"
[GO:0007017 "microtubule-based process" evidence=IMP] [GO:0007052
"mitotic spindle organization" evidence=IMP] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0035046
"pronuclear migration" evidence=IMP] [GO:0007344 "pronuclear
fusion" evidence=IMP] [GO:0035044 "sperm aster formation"
evidence=IMP] [GO:0007056 "spindle assembly involved in female
meiosis" evidence=IMP] [GO:0007343 "egg activation" evidence=IMP]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA] [GO:0006378 "mRNA polyadenylation" evidence=IMP]
[GO:0001556 "oocyte maturation" evidence=IMP] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0002805 "regulation of
antimicrobial peptide biosynthetic process" evidence=IMP]
Pfam:PF03828 GO:GO:0005524 GO:GO:0035046 GO:GO:0005737
GO:GO:0007052 GO:GO:0046872 EMBL:AE014298 GO:GO:0006378
GO:GO:0003723 GO:GO:0001556 GO:GO:0008298 GO:GO:0002805
GO:GO:0007344 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0007343 GeneTree:ENSGT00550000074490 KO:K14079
RefSeq:NP_572766.1 UniGene:Dm.6637 ProteinModelPortal:Q9VYS4
SMR:Q9VYS4 IntAct:Q9VYS4 MINT:MINT-300598 STRING:Q9VYS4
PRIDE:Q9VYS4 EnsemblMetazoa:FBtr0073573 GeneID:32152
KEGG:dme:Dmel_CG15737 UCSC:CG15737-RA CTD:32152 FlyBase:FBgn0260780
InParanoid:Q9VYS4 OMA:DSSDIDM OrthoDB:EOG4S7H5K PhylomeDB:Q9VYS4
GenomeRNAi:32152 NextBio:777126 Bgee:Q9VYS4 GO:GO:0035044
GO:GO:0007056 Uniprot:Q9VYS4
Length = 1373
Score = 214 (80.4 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 46/98 (46%), Positives = 66/98 (67%)
Query: 113 ARVPILKFETIHQNISCDISIDNLCGQIKSKFLFWI-SQIDGRFRDMVLLVKEWAKAHDI 171
ARVPIL+F+ I I D++ +N G IK+ +L + +Q+D R R +V++VK WA+ HDI
Sbjct: 1086 ARVPILRFKDISNGIEVDLNFNNCVG-IKNTYLLQLYAQMDWRTRPLVVIVKLWAQYHDI 1144
Query: 172 NNPKTGTFNSYSLSLLVLFHFQ-TCVPAILPPLKDIYP 208
N+ K T +SYSL L+VL + Q CVP +LP L +YP
Sbjct: 1145 NDAKRMTISSYSLVLMVLHYLQHACVPHVLPCLHSLYP 1182
>UNIPROTKB|F1RF43 [details] [associations]
symbol:PAPD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] Pfam:PF03828
GO:GO:0005634 GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 KO:K14079 CTD:167153
OMA:NQKTEAR EMBL:CU855670 EMBL:CU915633 RefSeq:XP_003123800.1
UniGene:Ssc.41247 Ensembl:ENSSSCT00000015417 GeneID:100512336
KEGG:ssc:100512336 Uniprot:F1RF43
Length = 484
Score = 211 (79.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 59/210 (28%), Positives = 104/210 (49%)
Query: 54 GSFVSNLFSRWGDLDISIELSNGSCISSAGKKVKQSLLGDLLR---ALRQKGGYRRLQFV 110
GS ++ +R D D+ + + C +K + + L+ R G R Q +
Sbjct: 201 GSSLNGFGTRTSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSGYIERPQLI 260
Query: 111 AHARVPILKFETIHQNISCDISIDNLCGQIKSKFLF-WISQIDGRFRDMVLLVKEWAKAH 169
A+VPI+KF + D++++N+ G I++ FL + ++ R R +VL++K+WA H
Sbjct: 261 -RAKVPIVKFRDKVSCVEFDLNVNNIVG-IRNTFLLRTYAYLENRVRPLVLVIKKWASHH 318
Query: 170 DINNPKTGTFNSYSLSLLVLFHFQTCVPAILPPLKDIYPGNLVDDLKGVRANAERQIAEI 229
+IN+ GT +SYSL L+VL + QT ILP ++ +YP + L + +
Sbjct: 319 EINDASRGTLSSYSLVLMVLHYLQTLPEPILPSIQKMYPESFSPAL-------QLHLVHQ 371
Query: 230 CAFNIARFSSDKYRKINRSSLAHLFVSFLE 259
+N+ + S N S+L L + FL+
Sbjct: 372 APYNVPPYLSK-----NESNLGDLLLGFLK 396
>SGD|S000005475 [details] [associations]
symbol:PAP2 "Non-canonical poly(A) polymerase" species:4932
"Saccharomyces cerevisiae" [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process"
evidence=IGI;IDA;IMP] [GO:0071039 "nuclear
polyadenylation-dependent CUT catabolic process" evidence=IGI;IMP]
[GO:0051575 "5'-deoxyribose-5-phosphate lyase activity"
evidence=IDA;IMP] [GO:0006284 "base-excision repair"
evidence=IGI;IMP] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IGI;IMP] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IGI;ISS;IMP;IDA] [GO:0043629 "ncRNA polyadenylation"
evidence=IGI;IMP;IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0031499 "TRAMP complex" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0006400 "tRNA modification" evidence=IMP]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0071037
"nuclear polyadenylation-dependent snRNA catabolic process"
evidence=IMP] [GO:0071035 "nuclear polyadenylation-dependent rRNA
catabolic process" evidence=IGI;IMP] [GO:0071036 "nuclear
polyadenylation-dependent snoRNA catabolic process"
evidence=IGI;IMP] [GO:0071050 "snoRNA polyadenylation"
evidence=IGI] [GO:0071031 "nuclear mRNA surveillance of mRNA 3'-end
processing" evidence=IGI] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IGI]
[GO:0071051 "polyadenylation-dependent snoRNA 3'-end processing"
evidence=IGI] [GO:0071047 "polyadenylation-dependent mRNA catabolic
process" evidence=IMP] [GO:0071040 "nuclear
polyadenylation-dependent antisense transcript catabolic process"
evidence=IMP] [GO:0071044 "histone mRNA catabolic process"
evidence=IGI] InterPro:IPR002934 Pfam:PF01909 SGD:S000005475
Pfam:PF03828 GO:GO:0005730 EMBL:BK006948 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 GO:GO:0006284 GO:GO:0006400
GO:GO:0031499 GO:GO:0071031 GO:GO:0071039 GO:GO:0071035
GO:GO:0071036 GO:GO:0071037 GO:GO:0071038 PDB:3NYB PDBsum:3NYB
GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
KO:K03514 OrthoDB:EOG43BQXK EMBL:Z48149 GO:GO:0071042 GO:GO:0071051
GO:GO:0051575 GeneTree:ENSGT00400000022055 GO:GO:0034475
EMBL:U31355 EMBL:Z74857 EMBL:AY723865 PIR:S51882 RefSeq:NP_014526.1
ProteinModelPortal:P53632 SMR:P53632 DIP:DIP-4214N IntAct:P53632
MINT:MINT-500696 STRING:P53632 PaxDb:P53632 EnsemblFungi:YOL115W
GeneID:854034 KEGG:sce:YOL115W CYGD:YOL115w HOGENOM:HOG000246586
OMA:LHVFGSY EvolutionaryTrace:P53632 NextBio:975589
Genevestigator:P53632 GermOnline:YOL115W GO:GO:0071040
GO:GO:0071050 Uniprot:P53632
Length = 584
Score = 211 (79.3 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 60/191 (31%), Positives = 98/191 (51%)
Query: 11 LKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDIS 70
+KD + ++P RE+ E R + IS +RE V+ + A + FGS+ ++L+ D+D
Sbjct: 183 IKDFVAYISPSREEIEIRNQTISTIREAVKQLWP--DADLHVFGSYSTDLYLPGSDIDCV 240
Query: 71 IELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCD 130
+ G GK+ + +L L L++K ++ VA ARVPI+KF H I D
Sbjct: 241 VTSELG------GKESRNNLYS-LASHLKKKNLATEVEVVAKARVPIIKFVEPHSGIHID 293
Query: 131 ISIDNLCGQIKSKFLF-WISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVL 189
+S + G +K + W+ G R++VL+VK++ A +NN TG +S+ LV
Sbjct: 294 VSFERTNGIEAAKLIREWLDDTPG-LRELVLIVKQFLHARRLNNVHTGGLGGFSIICLV- 351
Query: 190 FHFQTCVPAIL 200
F F P I+
Sbjct: 352 FSFLHMHPRII 362
>POMBASE|SPBC1685.06 [details] [associations]
symbol:cid11 "poly(A) polymerase Cid11 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR002934
Pfam:PF01909 PomBase:SPBC1685.06 Pfam:PF03828 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 EMBL:CU329671
GO:GO:0006397 GenomeReviews:CU329671_GR GO:GO:0003723 PIR:T39522
RefSeq:NP_595210.1 ProteinModelPortal:O74326
EnsemblFungi:SPBC1685.06.1 GeneID:2539762 KEGG:spo:SPBC1685.06
eggNOG:COG5260 OMA:ENNACER OrthoDB:EOG46QB1M NextBio:20800912
GO:GO:0004652 InterPro:IPR002058 Uniprot:O74326
Length = 478
Score = 207 (77.9 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 65/212 (30%), Positives = 112/212 (52%)
Query: 18 LNPLREDWETRMKVISDLREVVESVESLRGATVE--PFGSFVSNLFSRWGDLDISIELSN 75
L P E+ R + + LR ++ S E ++ A ++ FGS +NL + D+D+ I ++N
Sbjct: 58 LKPSNEEVSRRQQFVDKLRTIL-STE-IKDAKLDLFVFGSTENNLAIQQSDVDVCI-ITN 114
Query: 76 GSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDN 135
GS ++ ++ Q LL + G +++ V+ ARVPI+K +I CD++I+N
Sbjct: 115 GSKYLNSTCQLAQ-----LLYSY----GMKQIVCVSRARVPIVKIWDPQFDIHCDLNINN 165
Query: 136 LCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPK-TGTFNSYSLSLLVLFHFQT 194
+I +K L ID R R + L++K WAK + + +GT SY++S +++ QT
Sbjct: 166 DVAKINTKMLRLFVSIDPRVRPLGLIIKYWAKQRALCDAAGSGTITSYTISCMLVNFLQT 225
Query: 195 CVPAILPPLKDIYPGN----LVDDLKGVRANA 222
P ILP + D+ + VDD+ G + A
Sbjct: 226 RNPPILPAMLDLMSNDDNKMFVDDIVGFKEKA 257
>FB|FBgn0038934 [details] [associations]
symbol:Gld2 species:7227 "Drosophila melanogaster"
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007616 "long-term
memory" evidence=IMP] [GO:0005654 "nucleoplasm" evidence=IDA]
Pfam:PF03828 EMBL:AE014297 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0046872 GO:GO:0006397 GO:GO:0043005
GO:GO:0007616 GO:GO:0003723 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 GO:GO:0043631 EMBL:AY122076 EMBL:BT044483
RefSeq:NP_651012.2 ProteinModelPortal:Q9VD44 SMR:Q9VD44
IntAct:Q9VD44 MINT:MINT-1691551 STRING:Q9VD44
EnsemblMetazoa:FBtr0305038 EnsemblMetazoa:FBtr0310204 GeneID:42602
KEGG:dme:Dmel_CG5732 UCSC:CG5732-RA CTD:42602 FlyBase:FBgn0038934
GeneTree:ENSGT00550000074490 InParanoid:Q9VD44 KO:K14079
OMA:RYWREFF OrthoDB:EOG40GB69 PhylomeDB:Q9VD44 GenomeRNAi:42602
NextBio:829642 Bgee:Q9VD44 Uniprot:Q9VD44
Length = 1364
Score = 207 (77.9 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 54/156 (34%), Positives = 80/156 (51%)
Query: 54 GSFVSNLFSRWGDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHA 113
GS +S S+ D+DI + I S + V L + L + ++ + A
Sbjct: 981 GSSISYFGSKCSDMDICMLACTNPNIDSRMEAVYH--LHVMKELLGRTNMFQDFNLI-EA 1037
Query: 114 RVPILKFETIHQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINN 173
RVPIL+F + DI+ +N G + L+ SQ+D R R M L VK+WA+ H+INN
Sbjct: 1038 RVPILRFTDRCHKVEVDINFNNSVGIRNTHLLYCYSQLDWRVRPMALTVKQWAQYHNINN 1097
Query: 174 PKTGTFNSYSLSLLVLFHFQT-CVPAILPPLKDIYP 208
K T +SYSL L+V+ Q P +LP L ++YP
Sbjct: 1098 AKNMTISSYSLMLMVIHFLQVGASPPVLPCLHNLYP 1133
>UNIPROTKB|Q641A1 [details] [associations]
symbol:papd4-a "Poly(A) RNA polymerase GLD2-A" species:8355
"Xenopus laevis" [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0043631 "RNA polyadenylation"
evidence=ISS] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
GO:GO:0007275 GO:GO:0005524 GO:GO:0005737 GO:GO:0030154
GO:GO:0046872 GO:GO:0006397 GO:GO:0048477 GO:GO:0004652
InterPro:IPR002058 GO:GO:0043631 KO:K14079 EMBL:BC082438
RefSeq:NP_001087892.1 UniGene:Xl.1354 ProteinModelPortal:Q641A1
GeneID:447753 KEGG:xla:447753 CTD:447753 Xenbase:XB-GENE-1217415
HOVERGEN:HBG097533 Uniprot:Q641A1
Length = 509
Score = 200 (75.5 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 53/157 (33%), Positives = 86/157 (54%)
Query: 54 GSFVSNLFSRWGDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGY-RRLQFVAH 112
GS ++ +R D D+ + L + + Q +LG L + + Y RLQF+
Sbjct: 228 GSSLNGFGTRISDADLCLVLKEEPM--NQHTEATQ-ILGLLHKLFYTRLSYIERLQFI-R 283
Query: 113 ARVPILKFETIHQNISCDISIDNLCGQIKSKFLF-WISQIDGRFRDMVLLVKEWAKAHDI 171
A+VPI+KF D++++N+ G I++ FL + ++ R R +VL++K+WA H I
Sbjct: 284 AKVPIVKFRDKVSGAEFDLNVNNVVG-IRNTFLLRTYAYLESRVRPLVLVIKKWANHHGI 342
Query: 172 NNPKTGTFNSYSLSLLVLFHFQTCVPAILPPLKDIYP 208
N+ GT +SY+L L+VL + QT ILP L+ YP
Sbjct: 343 NDASRGTLSSYTLVLMVLHYLQTLPEPILPSLQKKYP 379
>RGD|1586015 [details] [associations]
symbol:Zcchc6 "zinc finger, CCHC domain containing 6"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA;ISO] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IEA;ISO] [GO:0071044
"histone mRNA catabolic process" evidence=ISO] InterPro:IPR001878
InterPro:IPR002934 InterPro:IPR015880 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 SMART:SM00355 Pfam:PF03828
RGD:1586015 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:4.10.60.10 SUPFAM:SSF57756 InterPro:IPR002058 GO:GO:0050265
GO:GO:0031123 OrthoDB:EOG40VVNP IPI:IPI00211280
Ensembl:ENSRNOT00000067726 UCSC:RGD:1586015 ArrayExpress:D3ZL68
Uniprot:D3ZL68
Length = 1485
Score = 205 (77.2 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 54/205 (26%), Positives = 100/205 (48%)
Query: 5 NVLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRW 64
N+L+ + +P + + R + +L ++ + G + FGS + +
Sbjct: 992 NILDQVCIQCYKDFSPTIVEDQAREHIRQNLESFIK--QDFPGTKLSLFGSSKNGFGFKQ 1049
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIH 124
DLD+ + + NG + V+ + +L R LR+ G R + + A+VPI+KF +
Sbjct: 1050 SDLDVCMTI-NGHETAEGLDCVRT--IEELARVLRKHSGLRNILPITTAKVPIVKFSHLR 1106
Query: 125 QNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSL 184
+ DIS+ N ++ LF S ID R + + +K + K DI + G+ +SY+
Sbjct: 1107 SGLEVDISLYNTLALHNTRLLFAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAY 1166
Query: 185 SLLVLFHFQTCVPAILPPLKDIYPG 209
+L+VL+ Q P ++P L++IY G
Sbjct: 1167 TLMVLYFLQQRSPPVIPVLQEIYKG 1191
>TAIR|locus:2043669 [details] [associations]
symbol:AT2G45620 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA;ISS] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC003680 eggNOG:COG5260
InterPro:IPR002058 GO:GO:0016779 EMBL:AF360181 EMBL:AY039997
IPI:IPI00541796 PIR:T00875 RefSeq:NP_566048.1 UniGene:At.19458
UniGene:At.74976 ProteinModelPortal:O64642 SMR:O64642 STRING:O64642
PaxDb:O64642 PRIDE:O64642 EnsemblPlants:AT2G45620.1 GeneID:819170
KEGG:ath:AT2G45620 TAIR:At2g45620 HOGENOM:HOG000114999
InParanoid:O64642 OMA:DINKSEM PhylomeDB:O64642
ProtClustDB:CLSN2688946 ArrayExpress:O64642 Genevestigator:O64642
Uniprot:O64642
Length = 764
Score = 201 (75.8 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 54/191 (28%), Positives = 95/191 (49%)
Query: 18 LNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIELSNGS 77
L P E+ E + ++++ L +V + A + +GS ++ D+D+
Sbjct: 445 LIPAEEELEKQRQLMAHLENLV--AKEWPHAKLYLYGSCANSFGFPKSDIDV-------- 494
Query: 78 CISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNLC 137
C++ G + +S + L + + + +Q + ARVPI+K ISCDI I+N+
Sbjct: 495 CLAIEGDDINKSEMLLKLAEILESDNLQNVQALTRARVPIVKLMDPVTGISCDICINNVL 554
Query: 138 GQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVP 197
+ +K L +QID R R + +VK WAK+ +N GT +SY+ L+ + Q P
Sbjct: 555 AVVNTKLLRDYAQIDVRLRQLAFIVKHWAKSRRVNETYQGTLSSYAYVLMCIHFLQQRRP 614
Query: 198 AILPPLKDIYP 208
ILP L+++ P
Sbjct: 615 PILPCLQEMEP 625
>UNIPROTKB|E2RQN5 [details] [associations]
symbol:PAPD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] Pfam:PF03828
GO:GO:0005634 GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 OMA:NQKTEAR
EMBL:AAEX03002115 Ensembl:ENSCAFT00000014375 NextBio:20893469
Uniprot:E2RQN5
Length = 480
Score = 198 (74.8 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 43/111 (38%), Positives = 68/111 (61%)
Query: 99 RQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKSKFLF-WISQIDGRFRD 157
R G R Q + A+VPI+KF + D++++N+ G I++ FL + ++ R R
Sbjct: 245 RLSGYIERPQLI-RAKVPIVKFRDKVSCVEFDLNVNNIVG-IRNTFLLRTYAYLENRVRP 302
Query: 158 MVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAILPPLKDIYP 208
+VL++K+WA H+IN+ GT +SYSL L+VL + QT ILP ++ IYP
Sbjct: 303 LVLVIKKWASHHEINDASRGTLSSYSLVLMVLHYLQTLPEPILPSIQKIYP 353
>DICTYBASE|DDB_G0281431 [details] [associations]
symbol:DDB_G0281431 "Terminal uridylyltransferase 4"
species:44689 "Dictyostelium discoideum" [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] InterPro:IPR002934
Pfam:PF01909 dictyBase:DDB_G0281431 Pfam:PF03828 EMBL:AAFI02000041
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0016779 RefSeq:XP_640670.1
ProteinModelPortal:Q54TZ1 EnsemblProtists:DDB0205577 GeneID:8623055
KEGG:ddi:DDB_G0281431 InParanoid:Q54TZ1 Uniprot:Q54TZ1
Length = 920
Score = 198 (74.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 52/184 (28%), Positives = 94/184 (51%)
Query: 26 ETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSAGKK 85
+ R K DL ++ S+ G + FGS V+++ + D+D+ L K+
Sbjct: 584 DNRFKSFDDLARIL--TRSISGIRLFLFGSSVNSMALKNSDIDVCANL----------KR 631
Query: 86 VKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKSKFL 145
+ L+ ++ ++ +K GY + ++ +RVP++KF +I D+ I+NL S+ +
Sbjct: 632 NDEKLIF-IISSILKKNGYENIVTISQSRVPLIKFFDAKYDIHIDLCINNLLAIENSRLI 690
Query: 146 FWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAILPPL-K 204
S ID R + +L+K WAK+ +N+ + +SYS + L +F QT P +LP L K
Sbjct: 691 KSYSSIDSRMEPLFMLIKTWAKSKGLNDAAEKSLSSYSYANLTVFFLQTRQPPVLPCLHK 750
Query: 205 DIYP 208
+ P
Sbjct: 751 GMSP 754
>UNIPROTKB|I3L9X5 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 InterPro:IPR002934
Pfam:PF00098 Pfam:PF01909 PROSITE:PS50158 SMART:SM00343
Pfam:PF03828 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 InterPro:IPR002058 GO:GO:0016779
GeneTree:ENSGT00550000074490 OMA:TDCRSNL EMBL:CU929620
Ensembl:ENSSSCT00000029203 Uniprot:I3L9X5
Length = 1168
Score = 196 (74.1 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 56/207 (27%), Positives = 103/207 (49%)
Query: 6 VLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG 65
+L+ + K L+P + R +++ L + ++ E A + FGS + R
Sbjct: 714 ILDLVCKRCFDELSPPFSEQHNREQILIGLEKFIQK-EYDEKARLCLFGSSKNGFGFRDS 772
Query: 66 DLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQ 125
DLDI + L +A K + ++ +L + L++ G R + + A+VPI+KFE
Sbjct: 773 DLDICMTLEGHE---NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRS 829
Query: 126 NISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLS 185
+ DIS+ N Q ++ L + ID R + + +K +AK DI + G+ +SY+
Sbjct: 830 GLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYI 889
Query: 186 LLVLFHFQTCVPAILPPLKDIYPGNLV 212
L+VL+ Q P ++P L++I+ G +
Sbjct: 890 LMVLYFLQQRKPPVIPVLQEIFDGKQI 916
>UNIPROTKB|E9PKY2 [details] [associations]
symbol:ZCCHC11 "Terminal uridylyltransferase 4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001878 InterPro:IPR002934 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0008270 GO:GO:0003676 EMBL:AL513218
InterPro:IPR002058 GO:GO:0016779 EMBL:AL138849 HGNC:HGNC:28981
ChiTaRS:ZCCHC11 EMBL:AL591167 IPI:IPI00975609
ProteinModelPortal:E9PKY2 SMR:E9PKY2 Ensembl:ENST00000528642
ArrayExpress:E9PKY2 Bgee:E9PKY2 Uniprot:E9PKY2
Length = 1203
Score = 196 (74.1 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 56/207 (27%), Positives = 103/207 (49%)
Query: 6 VLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG 65
+L+ + K L+P + R +++ L + ++ E A + FGS + R
Sbjct: 879 ILDLVCKRCFDELSPPCSEQHNREQILIGLEKFIQK-EYDEKARLCLFGSSKNGFGFRDS 937
Query: 66 DLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQ 125
DLDI + L +A K + ++ +L + L++ G R + + A+VPI+KFE
Sbjct: 938 DLDICMTLEGHE---NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRS 994
Query: 126 NISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLS 185
+ DIS+ N Q ++ L + ID R + + +K +AK DI + G+ +SY+
Sbjct: 995 GLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYI 1054
Query: 186 LLVLFHFQTCVPAILPPLKDIYPGNLV 212
L+VL+ Q P ++P L++I+ G +
Sbjct: 1055 LMVLYFLQQRKPPVIPVLQEIFDGKQI 1081
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 42/181 (23%), Positives = 83/181 (45%)
Query: 23 EDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSA 82
+D R +++ ++ +V+ + L ++ +GS ++ + D++I I+
Sbjct: 371 DDLRVRQEIVEEMSKVITTF--LPECSLRLYGSSLTRFALKSSDVNIDIKFPP------- 421
Query: 83 GKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKS 142
K LL +L L++ Y ++ HA+VP++ + C +S N + +
Sbjct: 422 -KMNHPDLLIKVLGILKKNVLYVDVESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTT 480
Query: 143 KFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAILPP 202
L + +I+ F +VL + WAK I++ G SY +L+V+F Q P +LP
Sbjct: 481 DLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPC 540
Query: 203 L 203
L
Sbjct: 541 L 541
>UNIPROTKB|E1C6A7 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001816 "cytokine
production" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0010587 "miRNA catabolic
process" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0031054 "pre-miRNA processing" evidence=IEA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0050265
"RNA uridylyltransferase activity" evidence=IEA] [GO:0070102
"interleukin-6-mediated signaling pathway" evidence=IEA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0031054 GO:GO:0032088 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0010587 GO:GO:0031123 GO:GO:0031664 OMA:TDCRSNL
EMBL:AADN02012569 IPI:IPI00602900 Ensembl:ENSGALT00000017295
Uniprot:E1C6A7
Length = 1575
Score = 197 (74.4 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 56/207 (27%), Positives = 102/207 (49%)
Query: 6 VLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG 65
+L+ + K L+P + + R ++++ L + E A + FGS + R
Sbjct: 914 ILDIVCKRCFDELSPPLSEQQNREQILASLERFIRK-EYNDKARLCLFGSSKNGFGFRDS 972
Query: 66 DLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQ 125
DLDI + L +A K + ++ L + L++ G R + + A+VPI+KFE
Sbjct: 973 DLDICMTLEGHE---NAEKLNCKEIIEGLAKVLKKHPGLRNILPITTAKVPIVKFEHRRS 1029
Query: 126 NISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLS 185
+ DIS+ N Q ++ L + ID R + + +K +AK DI + G+ +SY+
Sbjct: 1030 GLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYI 1089
Query: 186 LLVLFHFQTCVPAILPPLKDIYPGNLV 212
L+VL+ Q P ++P L++I+ G +
Sbjct: 1090 LMVLYFLQQRNPPVIPVLQEIFDGKQI 1116
Score = 153 (58.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 40/179 (22%), Positives = 87/179 (48%)
Query: 23 EDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSA 82
+D+ R ++++++ ++++ + L ++ +GS ++ + D++I I+
Sbjct: 319 DDFRIRQEIVNEMEKIIQ--QPLPDCSLRMYGSCLTRFAFKTSDINIDIKFPP------- 369
Query: 83 GKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKS 142
K + +L +L L+ Y ++ HA+VP++ + I ++C +S N + +
Sbjct: 370 -KMSQPDVLIQVLEILKNSAVYSEVESDFHAKVPVVFCKDIKSGLTCKVSARNDVACLTT 428
Query: 143 KFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAILP 201
L + +++ +VL + WAK I+ G SYS +L+V+F Q P ILP
Sbjct: 429 DLLAALGKLEPVLIPLVLAFRYWAKLCHIDCQAEGGIPSYSFALMVIFFLQQRKPPILP 487
>UNIPROTKB|F1MCY7 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070102 "interleukin-6-mediated signaling pathway"
evidence=IEA] [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0031054 "pre-miRNA processing" evidence=IEA] [GO:0019827 "stem
cell maintenance" evidence=IEA] [GO:0010587 "miRNA catabolic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001816 "cytokine
production" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0031054 GO:GO:0032088 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0019827 GO:GO:0001816 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0010587 GO:GO:0031123
GO:GO:0031664 EMBL:DAAA02008880 EMBL:DAAA02008879 IPI:IPI01003734
Ensembl:ENSBTAT00000003525 OMA:TDCRSNL Uniprot:F1MCY7
Length = 1667
Score = 197 (74.4 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 56/208 (26%), Positives = 104/208 (50%)
Query: 5 NVLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRW 64
++L+ + K L+P + R +++ L + ++ E A + FGS + R
Sbjct: 971 DILDLVCKRCFDELSPPFSEQHNREQILIGLEKFIQK-EYDEKARLCLFGSSKNGFGFRD 1029
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIH 124
DLDI + L +A K + ++ +L + L++ G R + + A+VPI+KFE
Sbjct: 1030 SDLDICMTLEGHE---NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRR 1086
Query: 125 QNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSL 184
+ DIS+ N Q ++ L + ID R + + +K +AK DI + G+ +SY+
Sbjct: 1087 SGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAY 1146
Query: 185 SLLVLFHFQTCVPAILPPLKDIYPGNLV 212
L+VL+ Q P ++P L++I+ G +
Sbjct: 1147 ILMVLYFLQQRKPPVIPVLQEIFDGKQI 1174
Score = 133 (51.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 44/183 (24%), Positives = 86/183 (46%)
Query: 23 EDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSA 82
+D + R +++ ++ +VV + L ++ +GS ++ + D++I I+
Sbjct: 392 DDLKVRQEIVEEMSKVVTTF--LPECSLRLYGSSLTKFALKSSDVNIDIKFPP------- 442
Query: 83 GKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPIL--KFETIHQNISCDISIDNLCGQI 140
K LL +L L++ Y ++ HA+VP++ K H + C +S N +
Sbjct: 443 -KMNHPDLLIQVLGILKKSVLYVDVESDFHAKVPVVVCKDRKSHSGLLCRVSAGNDMACL 501
Query: 141 KSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAIL 200
+ L + +++ F +VL + WAK I++ G SY +L+V+F Q P +L
Sbjct: 502 TTDLLAALGKMEPVFTPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLL 561
Query: 201 PPL 203
P L
Sbjct: 562 PCL 564
>ZFIN|ZDB-GENE-050522-536 [details] [associations]
symbol:papd4 "PAP associated domain containing 4"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA;ISS] [GO:0043631 "RNA
polyadenylation" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
ZFIN:ZDB-GENE-050522-536 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 KO:K14079 HOVERGEN:HBG097533 CTD:167153
HOGENOM:HOG000088606 OrthoDB:EOG4P2Q22 EMBL:BC095312
IPI:IPI00607291 RefSeq:NP_001018436.1 UniGene:Dr.75639
ProteinModelPortal:Q503I9 GeneID:553626 KEGG:dre:553626
InParanoid:Q503I9 NextBio:20880363 Uniprot:Q503I9
Length = 489
Score = 190 (71.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 63/206 (30%), Positives = 104/206 (50%)
Query: 54 GSFVSNLFSRWGDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHA 113
GS ++ SR D D+ + + G ++ +K +L L+R L K Y + A
Sbjct: 207 GSSLNGFGSRSSDADLCLVIEEGP-VNH--RKDAVYVLS-LVRKLLYKLSYIEKPQLIRA 262
Query: 114 RVPILKFETIHQNISCDISIDNLCGQIKSKFLF-WISQIDGRFRDMVLLVKEWAKAHDIN 172
+VPI+KF + D++ +N G I++ FL + ++ R R +VL++K+WA H IN
Sbjct: 263 KVPIVKFRDRISGVEFDLNFNNTVG-IRNTFLLRTYAFVEKRVRPLVLVIKKWANHHCIN 321
Query: 173 NPKTGTFNSYSLSLLVLFHFQTCVPAILPPLKDIYPGNLVDDLKGVRANAERQIAEICAF 232
+ GT +SY+L L+VL + QT ++P L+ YP D + ++I AF
Sbjct: 322 DASRGTLSSYTLVLMVLHYLQTLPEPVIPCLQRDYP-TCFDPKMDIHLVPSGP-SDIPAF 379
Query: 233 NIARFSSDKYRKINRSSLAHLFVSFL 258
++R N+SSL LF+ FL
Sbjct: 380 -VSR---------NQSSLGDLFLGFL 395
>UNIPROTKB|F1PFM0 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070102 "interleukin-6-mediated
signaling pathway" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0031664 "regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0031054
"pre-miRNA processing" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0010587 "miRNA catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0001816 "cytokine production"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909 PROSITE:PS50158
SMART:SM00343 Pfam:PF03828 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0031054
GO:GO:0032088 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0019827
GO:GO:0001816 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0010587 GO:GO:0031123
GO:GO:0031664 EMBL:AAEX03009705 Ensembl:ENSCAFT00000006009
Uniprot:F1PFM0
Length = 1635
Score = 196 (74.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 56/207 (27%), Positives = 103/207 (49%)
Query: 6 VLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG 65
+L+ + K L+P + R +++ L + ++ E A + FGS + R
Sbjct: 940 ILDLVCKRCFDELSPPFSEQHNREQILIGLEKFIQK-EYDEKARLCLFGSSKNGFGFRDS 998
Query: 66 DLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQ 125
DLDI + L +A K + ++ +L + L++ G R + + A+VPI+KFE
Sbjct: 999 DLDICMTLEGHE---NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRS 1055
Query: 126 NISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLS 185
+ DIS+ N Q ++ L + ID R + + +K +AK DI + G+ +SY+
Sbjct: 1056 GLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYI 1115
Query: 186 LLVLFHFQTCVPAILPPLKDIYPGNLV 212
L+VL+ Q P ++P L++I+ G +
Sbjct: 1116 LMVLYFLQQRKPPVIPVLQEIFDGKQI 1142
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 41/181 (22%), Positives = 84/181 (46%)
Query: 23 EDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSA 82
+D R +++ ++ +V+ + L ++ +GS ++ + D++I I+
Sbjct: 363 DDLRVRQEIVEEMSKVITTF--LPECSLRLYGSSLTKFALKNSDVNIDIKFPP------- 413
Query: 83 GKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKS 142
+ LL +L L++ Y ++ HA+VP++ + + C +S N + +
Sbjct: 414 -RMNHPDLLIQVLGILKKSVLYIDVESDFHAKVPVVVCKDRKSGLLCRVSAGNDMACLTT 472
Query: 143 KFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAILPP 202
L + +++ F +VL + WAK I++ G SY +L+VLF Q P +LP
Sbjct: 473 DLLAALGKMEPVFTPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVLFFLQQRKPPLLPC 532
Query: 203 L 203
L
Sbjct: 533 L 533
>UNIPROTKB|Q5TAX3 [details] [associations]
symbol:ZCCHC11 "Terminal uridylyltransferase 4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001816 "cytokine production" evidence=IEA] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0070102
"interleukin-6-mediated signaling pathway" evidence=IEA]
[GO:0031054 "pre-miRNA processing" evidence=IMP] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010586 "miRNA metabolic process" evidence=ISS] [GO:0071044
"histone mRNA catabolic process" evidence=IMP] [GO:0019827 "stem
cell maintenance" evidence=IMP] [GO:0010587 "miRNA catabolic
process" evidence=IMP] [GO:0031123 "RNA 3'-end processing"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS00028 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 EMBL:CH471059
GO:GO:0008270 GO:GO:0003676 GO:GO:0031054 GO:GO:0032088
Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0019827 GO:GO:0001816
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0050265 GO:GO:0010587
GO:GO:0031123 GO:GO:0031664 EMBL:AK303532 EMBL:AL138849
EMBL:BC131734 EMBL:D83776 IPI:IPI00289861 IPI:IPI00550431
RefSeq:NP_001009881.1 RefSeq:NP_056084.1 UniGene:Hs.655407
ProteinModelPortal:Q5TAX3 SMR:Q5TAX3 IntAct:Q5TAX3 STRING:Q5TAX3
PhosphoSite:Q5TAX3 DMDM:116242850 PaxDb:Q5TAX3 PRIDE:Q5TAX3
DNASU:23318 Ensembl:ENST00000257177 Ensembl:ENST00000355809
Ensembl:ENST00000371544 GeneID:23318 KEGG:hsa:23318 UCSC:uc001ctx.2
CTD:23318 GeneCards:GC01M052888 HGNC:HGNC:28981 HPA:HPA027412
HPA:HPA027973 MIM:613692 neXtProt:NX_Q5TAX3 PharmGKB:PA134918178
KO:K13291 OrthoDB:EOG4DZ1TJ ChiTaRS:ZCCHC11 GenomeRNAi:23318
NextBio:45208 ArrayExpress:Q5TAX3 Bgee:Q5TAX3 CleanEx:HS_ZCCHC11
Genevestigator:Q5TAX3 GermOnline:ENSG00000134744 Uniprot:Q5TAX3
Length = 1644
Score = 196 (74.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 56/207 (27%), Positives = 103/207 (49%)
Query: 6 VLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG 65
+L+ + K L+P + R +++ L + ++ E A + FGS + R
Sbjct: 950 ILDLVCKRCFDELSPPCSEQHNREQILIGLEKFIQK-EYDEKARLCLFGSSKNGFGFRDS 1008
Query: 66 DLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQ 125
DLDI + L +A K + ++ +L + L++ G R + + A+VPI+KFE
Sbjct: 1009 DLDICMTLEGHE---NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRS 1065
Query: 126 NISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLS 185
+ DIS+ N Q ++ L + ID R + + +K +AK DI + G+ +SY+
Sbjct: 1066 GLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYI 1125
Query: 186 LLVLFHFQTCVPAILPPLKDIYPGNLV 212
L+VL+ Q P ++P L++I+ G +
Sbjct: 1126 LMVLYFLQQRKPPVIPVLQEIFDGKQI 1152
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 42/181 (23%), Positives = 83/181 (45%)
Query: 23 EDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSA 82
+D R +++ ++ +V+ + L ++ +GS ++ + D++I I+
Sbjct: 371 DDLRVRQEIVEEMSKVITTF--LPECSLRLYGSSLTRFALKSSDVNIDIKFPP------- 421
Query: 83 GKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKS 142
K LL +L L++ Y ++ HA+VP++ + C +S N + +
Sbjct: 422 -KMNHPDLLIKVLGILKKNVLYVDVESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTT 480
Query: 143 KFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAILPP 202
L + +I+ F +VL + WAK I++ G SY +L+V+F Q P +LP
Sbjct: 481 DLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPC 540
Query: 203 L 203
L
Sbjct: 541 L 541
>MGI|MGI:2445126 [details] [associations]
symbol:Zcchc11 "zinc finger, CCHC domain containing 11"
species:10090 "Mus musculus" [GO:0001816 "cytokine production"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0010586 "miRNA metabolic
process" evidence=IMP] [GO:0010587 "miRNA catabolic process"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0019827 "stem cell maintenance" evidence=ISO] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0031054 "pre-miRNA processing"
evidence=ISO] [GO:0031123 "RNA 3'-end processing" evidence=ISO;IDA]
[GO:0031664 "regulation of lipopolysaccharide-mediated signaling
pathway" evidence=IDA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IDA] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=ISO;IDA] [GO:0070102
"interleukin-6-mediated signaling pathway" evidence=IMP]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 MGI:MGI:2445126 Pfam:PF03828
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0032755 GO:GO:0003676 GO:GO:0031054 GO:GO:0032088
Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0019827 GO:GO:0001816
EMBL:AL626783 eggNOG:COG5260 InterPro:IPR002058 GO:GO:0050265
GO:GO:0070102 EMBL:AL627238 GeneTree:ENSGT00550000074490
GO:GO:0010587 GO:GO:0031123 GO:GO:0031664 CTD:23318 KO:K13291
ChiTaRS:ZCCHC11 EMBL:BC150791 EMBL:AK220327 EMBL:AK134388
IPI:IPI00648042 RefSeq:NP_780681.2 UniGene:Mm.25181
UniGene:Mm.446602 ProteinModelPortal:B2RX14 SMR:B2RX14
DIP:DIP-48571N STRING:B2RX14 PhosphoSite:B2RX14 PaxDb:B2RX14
PRIDE:B2RX14 Ensembl:ENSMUST00000043368 Ensembl:ENSMUST00000155068
GeneID:230594 KEGG:mmu:230594 UCSC:uc008ubd.1 HOGENOM:HOG000231134
InParanoid:A2A8R8 NextBio:379961 Bgee:B2RX14 Genevestigator:B2RX14
Uniprot:B2RX14
Length = 1644
Score = 196 (74.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 56/207 (27%), Positives = 103/207 (49%)
Query: 6 VLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG 65
+L+ + K L+P + R +++ L + ++ E A + FGS + R
Sbjct: 967 ILDLVCKRCFDELSPPCSEQHNREQILIGLEKFIQK-EYDEKARLCLFGSSKNGFGFRDS 1025
Query: 66 DLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQ 125
DLDI + L +A K + ++ +L + L++ G R + + A+VPI+KFE
Sbjct: 1026 DLDICMTLEGHE---NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRS 1082
Query: 126 NISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLS 185
+ DIS+ N Q ++ L + ID R + + +K +AK DI + G+ +SY+
Sbjct: 1083 GLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYI 1142
Query: 186 LLVLFHFQTCVPAILPPLKDIYPGNLV 212
L+VL+ Q P ++P L++I+ G +
Sbjct: 1143 LMVLYFLQQRKPPVIPVLQEIFDGKQI 1169
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 41/181 (22%), Positives = 83/181 (45%)
Query: 23 EDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSA 82
+D R ++ ++ +V+ + L ++ +GS ++ + D++I I+
Sbjct: 391 DDLRIRQDIVEEMSKVIMTF--LPECSLRLYGSSLTKFALKSSDVNIDIKFPP------- 441
Query: 83 GKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKS 142
K LL +L L++ Y ++ HA+VP++ + + C +S N + +
Sbjct: 442 -KMNHPDLLIQVLGILKKSALYIDVESDFHAKVPVVVCKDRKSALLCRVSAGNDMACLTT 500
Query: 143 KFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAILPP 202
L + +++ F +VL + WAK I++ G SY +L+V+F Q P +LP
Sbjct: 501 DLLAALGKVEPVFTPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPC 560
Query: 203 L 203
L
Sbjct: 561 L 561
>UNIPROTKB|J9P9X1 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00550000074490
OMA:TDCRSNL EMBL:AAEX03009705 Ensembl:ENSCAFT00000048947
Uniprot:J9P9X1
Length = 1647
Score = 196 (74.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 56/207 (27%), Positives = 103/207 (49%)
Query: 6 VLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG 65
+L+ + K L+P + R +++ L + ++ E A + FGS + R
Sbjct: 952 ILDLVCKRCFDELSPPFSEQHNREQILIGLEKFIQK-EYDEKARLCLFGSSKNGFGFRDS 1010
Query: 66 DLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQ 125
DLDI + L +A K + ++ +L + L++ G R + + A+VPI+KFE
Sbjct: 1011 DLDICMTLEGHE---NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRS 1067
Query: 126 NISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLS 185
+ DIS+ N Q ++ L + ID R + + +K +AK DI + G+ +SY+
Sbjct: 1068 GLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYI 1127
Query: 186 LLVLFHFQTCVPAILPPLKDIYPGNLV 212
L+VL+ Q P ++P L++I+ G +
Sbjct: 1128 LMVLYFLQQRKPPVIPVLQEIFDGKQI 1154
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 41/181 (22%), Positives = 84/181 (46%)
Query: 23 EDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSA 82
+D R +++ ++ +V+ + L ++ +GS ++ + D++I I+
Sbjct: 375 DDLRVRQEIVEEMSKVITTF--LPECSLRLYGSSLTKFALKNSDVNIDIKFPP------- 425
Query: 83 GKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKS 142
+ LL +L L++ Y ++ HA+VP++ + + C +S N + +
Sbjct: 426 -RMNHPDLLIQVLGILKKSVLYIDVESDFHAKVPVVVCKDRKSGLLCRVSAGNDMACLTT 484
Query: 143 KFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAILPP 202
L + +++ F +VL + WAK I++ G SY +L+VLF Q P +LP
Sbjct: 485 DLLAALGKMEPVFTPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVLFFLQQRKPPLLPC 544
Query: 203 L 203
L
Sbjct: 545 L 545
>MGI|MGI:2387179 [details] [associations]
symbol:Zcchc6 "zinc finger, CCHC domain containing 6"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=ISO] InterPro:IPR001878
InterPro:IPR015880 Pfam:PF00098 PROSITE:PS00028 PROSITE:PS50158
SMART:SM00343 SMART:SM00355 MGI:MGI:2387179 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:4.10.60.10 SUPFAM:SSF57756 eggNOG:COG5260 InterPro:IPR002058
GO:GO:0050265 GO:GO:0031123 KO:K13291 CTD:79670 EMBL:BC023880
EMBL:BC043111 EMBL:BC023438 EMBL:AK031043 IPI:IPI00262966
RefSeq:NP_705766.3 UniGene:Mm.233082 ProteinModelPortal:Q5BLK4
SMR:Q5BLK4 PhosphoSite:Q5BLK4 PaxDb:Q5BLK4 PRIDE:Q5BLK4
GeneID:214290 KEGG:mmu:214290 UCSC:uc007qvf.1 HOGENOM:HOG000155767
InParanoid:A1A4B1 OrthoDB:EOG40VVNP NextBio:374248
CleanEx:MM_ZCCHC6 Genevestigator:Q5BLK4
GermOnline:ENSMUSG00000035248 Uniprot:Q5BLK4
Length = 1491
Score = 195 (73.7 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 53/205 (25%), Positives = 99/205 (48%)
Query: 5 NVLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRW 64
N+L+ + +P + + R + +L ++ + G + FGS + +
Sbjct: 995 NILDQVCVQCYKDFSPTIVEDQAREHIRQNLESFIK--QDFPGTKLSLFGSSKNGFGFKQ 1052
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIH 124
DLD+ + + NG + V+ + +L R LR+ G R + + A+VPI+KF +
Sbjct: 1053 SDLDVCMTI-NGHETAEGLDCVRT--IEELARVLRKHSGLRNILPITTAKVPIVKFFHLR 1109
Query: 125 QNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSL 184
+ DIS+ N ++ L S ID R + + +K + K DI + G+ +SY+
Sbjct: 1110 SGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAY 1169
Query: 185 SLLVLFHFQTCVPAILPPLKDIYPG 209
+L+VL+ Q P ++P L++IY G
Sbjct: 1170 TLMVLYFLQQRSPPVIPVLQEIYKG 1194
Score = 128 (50.1 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 42/183 (22%), Positives = 85/183 (46%)
Query: 34 DLREVVESV--ESLRGATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSAGKKVKQSLL 91
+++ V+ESV L ++ +GS S L R D D++I++ + +S + +L
Sbjct: 318 EIKRVMESVFRHKLPDCSLRLYGSSCSRLGFR--DSDVNIDVQFPAVMS------QPDVL 369
Query: 92 GDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKSKFLFWISQI 151
+ L+ + + HARVP++ + C +S N + +K L + ++
Sbjct: 370 LLVQECLKNSDSFIDVDADFHARVPVVVCRDKQSGLLCKVSAGNENAWLTTKHLTALGKL 429
Query: 152 DGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAILPPLKDIYPGNL 211
+ R +V+ + WAK I+ P+ G Y +L+ +F Q +LP +Y G+
Sbjct: 430 EPRLVPLVIAFRYWAKLCSIDRPEEGGLPPYVFALMAVFFLQQRKEPLLP----VYLGSW 485
Query: 212 VDD 214
+++
Sbjct: 486 IEE 488
>WB|WBGene00003499 [details] [associations]
symbol:mut-2 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0000335 "negative regulation
of transposition, DNA-mediated" evidence=IMP] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 GO:GO:0009792 GO:GO:0048471 GO:GO:0016246
GO:GO:0045132 EMBL:FO081226 eggNOG:COG5260 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00550000074490 GO:GO:0000335 PIR:H87803
RefSeq:NP_491834.1 ProteinModelPortal:O44768 DIP:DIP-27246N
MINT:MINT-1113744 STRING:O44768 PaxDb:O44768 PRIDE:O44768
EnsemblMetazoa:K04F10.6a GeneID:187005 KEGG:cel:CELE_K04F10.6
UCSC:K04F10.6a CTD:187005 WormBase:K04F10.6a HOGENOM:HOG000019766
InParanoid:O44768 OMA:TWLFNIV NextBio:933748 ArrayExpress:O44768
Uniprot:O44768
Length = 441
Score = 186 (70.5 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 44/106 (41%), Positives = 64/106 (60%)
Query: 107 LQFVAHARVPILKFETIHQNISCDISI--DNLCGQIKSKFLF-WISQIDGRFRDMVLLVK 163
+Q V A++ ILK T+ I CDIS+ D + + FL ++ IDGRF + +VK
Sbjct: 168 IQLV-QAQIQILKVMTV-DGIDCDISVVMDRFLSSMHNSFLIRHLAHIDGRFAPLCAIVK 225
Query: 164 EWAKAHDINNPKTGTFNSYSLSLLVLFHFQTC--VPAILPPLKDIY 207
+WA + + +PK G FNSY+L LLV+ HF C P ILP L++I+
Sbjct: 226 QWAASTKVKDPKDGGFNSYALVLLVI-HFLQCGTFPPILPNLQEIF 270
>UNIPROTKB|Q5VYS8 [details] [associations]
symbol:ZCCHC6 "Terminal uridylyltransferase 7" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IDA] [GO:0071044 "histone
mRNA catabolic process" evidence=IMP] [GO:0031123 "RNA 3'-end
processing" evidence=IDA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS00028 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 eggNOG:COG5260 InterPro:IPR002058 GO:GO:0050265
EMBL:AL137849 GO:GO:0031123 KO:K13291 EMBL:AL832026 EMBL:AL832193
EMBL:BX641077 EMBL:CR933643 EMBL:CR933644 EMBL:CR936608
EMBL:AL353678 EMBL:BC032456 EMBL:AK023471 EMBL:AK055546
EMBL:AK055948 EMBL:AB051498 IPI:IPI00336000 IPI:IPI00374531
IPI:IPI00552923 IPI:IPI00604491 IPI:IPI00604635 IPI:IPI00604680
RefSeq:NP_001171988.1 RefSeq:NP_001172003.1 RefSeq:NP_078893.2
UniGene:Hs.597057 ProteinModelPortal:Q5VYS8 SMR:Q5VYS8
IntAct:Q5VYS8 PhosphoSite:Q5VYS8 DMDM:67462100 PaxDb:Q5VYS8
PRIDE:Q5VYS8 DNASU:79670 Ensembl:ENST00000277141
Ensembl:ENST00000375957 Ensembl:ENST00000375960
Ensembl:ENST00000375961 Ensembl:ENST00000375963 GeneID:79670
KEGG:hsa:79670 UCSC:uc004aoq.3 UCSC:uc004aot.3 UCSC:uc004aov.3
UCSC:uc004aow.3 CTD:79670 GeneCards:GC09M088902 H-InvDB:HIX0008144
HGNC:HGNC:25817 HPA:HPA020615 HPA:HPA020620 neXtProt:NX_Q5VYS8
PharmGKB:PA134971144 InParanoid:Q5VYS8 OMA:KYFALPH ChiTaRS:ZCCHC6
GenomeRNAi:79670 NextBio:68893 ArrayExpress:Q5VYS8 Bgee:Q5VYS8
CleanEx:HS_ZCCHC6 Genevestigator:Q5VYS8 GermOnline:ENSG00000083223
Uniprot:Q5VYS8
Length = 1495
Score = 192 (72.6 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 55/206 (26%), Positives = 102/206 (49%)
Query: 5 NVLEPILKDILGMLNP-LREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSR 63
N+L+ + +P + ED + R + +L + + G + FGS + +
Sbjct: 999 NILDQVCIQCYKDFSPTIIED-QAREHIRQNLESFIR--QDFPGTKLSLFGSSKNGFGFK 1055
Query: 64 WGDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETI 123
DLD+ + + NG ++ G +++ +L R LR+ G R + + A+VPI+KF +
Sbjct: 1056 QSDLDVCMTI-NG-LETAEGLDCVRTI-EELARVLRKHSGLRNILPITTAKVPIVKFFHL 1112
Query: 124 HQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYS 183
+ DIS+ N ++ L S ID R + + +K + K DI + G+ +SY+
Sbjct: 1113 RSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYA 1172
Query: 184 LSLLVLFHFQTCVPAILPPLKDIYPG 209
+L+VL+ Q P ++P L++IY G
Sbjct: 1173 YTLMVLYFLQQRNPPVIPVLQEIYKG 1198
>UNIPROTKB|E2RM29 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0031123 EMBL:AAEX03000505 Ensembl:ENSCAFT00000002070
NextBio:20851989 Uniprot:E2RM29
Length = 1497
Score = 192 (72.6 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 52/205 (25%), Positives = 100/205 (48%)
Query: 5 NVLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRW 64
N+L+ + +P + + R + +L + + G + FGS + +
Sbjct: 1001 NILDQVCVQCYKDFSPTISEDQAREHIRQNLESFIR--QEFPGTKLSLFGSSKNGFGFKQ 1058
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIH 124
DLD+ + + NG ++ G +++ +L R L++ G R + + A+VPI+KF +
Sbjct: 1059 SDLDVCMTI-NG-LETAEGLDCVRTI-EELARVLKKHSGLRNILPITTAKVPIVKFFHLR 1115
Query: 125 QNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSL 184
+ DIS+ N ++ L S ID R + + +K + K DI + G+ +SY+
Sbjct: 1116 SGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAY 1175
Query: 185 SLLVLFHFQTCVPAILPPLKDIYPG 209
+L+VL+ Q P ++P L++IY G
Sbjct: 1176 TLMVLYFLQQRNPPVIPVLQEIYKG 1200
>UNIPROTKB|J9P044 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR002058 GeneTree:ENSGT00550000074490
OMA:KYFALPH EMBL:AAEX03000505 Ensembl:ENSCAFT00000049711
Uniprot:J9P044
Length = 1542
Score = 192 (72.6 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 52/205 (25%), Positives = 100/205 (48%)
Query: 5 NVLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRW 64
N+L+ + +P + + R + +L + + G + FGS + +
Sbjct: 999 NILDQVCVQCYKDFSPTISEDQAREHIRQNLESFIR--QEFPGTKLSLFGSSKNGFGFKQ 1056
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIH 124
DLD+ + + NG ++ G +++ +L R L++ G R + + A+VPI+KF +
Sbjct: 1057 SDLDVCMTI-NG-LETAEGLDCVRTI-EELARVLKKHSGLRNILPITTAKVPIVKFFHLR 1113
Query: 125 QNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSL 184
+ DIS+ N ++ L S ID R + + +K + K DI + G+ +SY+
Sbjct: 1114 SGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAY 1173
Query: 185 SLLVLFHFQTCVPAILPPLKDIYPG 209
+L+VL+ Q P ++P L++IY G
Sbjct: 1174 TLMVLYFLQQRNPPVIPVLQEIYKG 1198
>UNIPROTKB|E1BAR2 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0031123 KO:K13291 CTD:79670 OMA:KYFALPH EMBL:DAAA02023954
IPI:IPI00721027 RefSeq:NP_001192681.1 UniGene:Bt.42314
Ensembl:ENSBTAT00000002277 GeneID:513209 KEGG:bta:513209
NextBio:20870748 Uniprot:E1BAR2
Length = 1498
Score = 191 (72.3 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 54/206 (26%), Positives = 101/206 (49%)
Query: 5 NVLEPILKDILGMLNP-LREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSR 63
N+L+ + +P + ED + R + +L + + G + FGS + +
Sbjct: 1002 NILDQVCIQCYKDFSPTVLED-QAREHIRQNLENFIR--QEFPGTKLSLFGSSKNGFGFK 1058
Query: 64 WGDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETI 123
DLD+ + + NG + +A + + +L R L++ G R + + A+VPI+KF +
Sbjct: 1059 QSDLDVCMTI-NG--LETAEELDCVRTIEELARVLKKHSGLRNILPITTAKVPIVKFFHL 1115
Query: 124 HQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYS 183
+ DIS+ N ++ L S ID R + + +K + K DI + G+ +SY+
Sbjct: 1116 RSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYA 1175
Query: 184 LSLLVLFHFQTCVPAILPPLKDIYPG 209
+L+VL+ Q P ++P L++IY G
Sbjct: 1176 YTLMVLYFLQQRNPPVIPVLQEIYKG 1201
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 193 (73.0 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 62/220 (28%), Positives = 106/220 (48%)
Query: 43 ESLRGATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKG 102
E A++ +GSF+S L DLDI+ S+ +K + L + + L +
Sbjct: 2210 EGFATASINLYGSFLSGLSLNDSDLDINF---------SSTQKEDTTHLKQVYKYLNRSQ 2260
Query: 103 GYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLV 162
Y+ ++ A+VPI++F+ I + D+ +++ S L ID R RD+VLLV
Sbjct: 2261 LYKLIEKRTDAKVPIIRFKEISSGVHFDMCFNSMMSYHNSLLLGEYCSIDNRSRDLVLLV 2320
Query: 163 KEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAILPPLKDIYPGNLVDDLKGVRANA 222
K WA + D+NN TF+S+ L +V+ Q+ P ILP L+ L++ R
Sbjct: 2321 KWWAVSKDLNNAAEKTFSSFCLVNMVIHFLQSLNPPILPNLQTT-SNQLLEKYSTNRNLI 2379
Query: 223 ERQIAEICAFNIARF----SSDKYR-KINRSSLAHLFVSF 257
+ + I + ++ S +K+ K N+ ++A LF F
Sbjct: 2380 KLKSQTIVENYLVKYYDWSSFNKFEPKRNKLTIAQLFYQF 2419
>UNIPROTKB|F1S6H9 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070102 "interleukin-6-mediated signaling pathway"
evidence=IEA] [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0031054 "pre-miRNA processing" evidence=IEA] [GO:0019827 "stem
cell maintenance" evidence=IEA] [GO:0010587 "miRNA catabolic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001816 "cytokine
production" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0031054 GO:GO:0032088 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0019827 GO:GO:0001816 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0010587 GO:GO:0031123
GO:GO:0031664 InterPro:IPR025829 Pfam:PF13696 EMBL:CU929620
Ensembl:ENSSSCT00000004271 Uniprot:F1S6H9
Length = 1363
Score = 190 (71.9 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 55/198 (27%), Positives = 99/198 (50%)
Query: 15 LGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIELS 74
L L+P + R +++ L + ++ E A + FGS + R DLDI + L
Sbjct: 677 LDELSPPFSEQHNREQILIGLEKFIQK-EYDEKARLCLFGSSKNGFGFRDSDLDICMTLE 735
Query: 75 NGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISID 134
+A K + ++ +L + L++ G R + + A+VPI+KFE + DIS+
Sbjct: 736 GHE---NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRSGLEGDISLY 792
Query: 135 NLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQT 194
N Q ++ L + ID R + + +K +AK DI + G+ +SY+ L+VL+ Q
Sbjct: 793 NTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQQ 852
Query: 195 CVPAILPPLKDIYPGNLV 212
P ++P L++I+ G +
Sbjct: 853 RKPPVIPVLQEIFDGKQI 870
>UNIPROTKB|K7GM92 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
Gene3D:4.10.60.10 SUPFAM:SSF57756 InterPro:IPR002058
GeneTree:ENSGT00550000074490 EMBL:CU694299 RefSeq:XP_003130685.2
Ensembl:ENSSSCT00000035632 GeneID:100516638 Uniprot:K7GM92
Length = 1497
Score = 190 (71.9 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 54/206 (26%), Positives = 102/206 (49%)
Query: 5 NVLEPILKDILGMLNP-LREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSR 63
N+L+ + +P + ED + R + +L + + G + FGS + +
Sbjct: 1002 NILDQVCIQCYKDFSPTILED-QAREHIRQNLENFIR--QEFPGTKLSLFGSSKNGFGFK 1058
Query: 64 WGDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETI 123
DLD+ + + NG ++ G +++ +L R L++ G R + + A+VPI+KF +
Sbjct: 1059 QSDLDVCMTI-NG-LETAEGLDCVRTI-EELARVLKKHSGLRNILPITTAKVPIVKFFHL 1115
Query: 124 HQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYS 183
+ DIS+ N ++ L S ID R + + +K + K DI + G+ +SY+
Sbjct: 1116 RSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYA 1175
Query: 184 LSLLVLFHFQTCVPAILPPLKDIYPG 209
+L+VL+ Q P ++P L++IY G
Sbjct: 1176 YTLMVLYFLQQRNPPVIPVLQEIYKG 1201
>UNIPROTKB|F1RPX0 [details] [associations]
symbol:TUT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR015880
PROSITE:PS50102 SMART:SM00355 SMART:SM00360 Pfam:PF03828
GO:GO:0005730 GO:GO:0000166 GO:GO:0016607 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730 GO:GO:0005847
GO:GO:0006379 GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0016180 OMA:EQQGCAG
EMBL:FP102338 EMBL:FP312617 Ensembl:ENSSSCT00000014279
Uniprot:F1RPX0
Length = 872
Score = 167 (63.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 45/142 (31%), Positives = 73/142 (51%)
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIH 124
GDL ++EL+ A L+G +LR G YR +Q V AR P++KF
Sbjct: 318 GDLGKAVELAQALKGEKAEGGAMLELVGSILRGC-VPGVYR-VQTVPSARRPVVKFCHRP 375
Query: 125 QNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSL 184
+ D+S+ N S+FL S++DGR R +V V+ WA+ ++ ++Y+L
Sbjct: 376 SGLHGDVSLSNRLALHNSRFLSLCSELDGRVRPLVYTVRCWAQGRGLSGSGP-LLSNYAL 434
Query: 185 SLLVLFHFQTCVPAILPPLKDI 206
+LLV++ QT P +LP + +
Sbjct: 435 TLLVIYFLQTRDPPVLPTVSQL 456
Score = 63 (27.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 14 ILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG-DLDISIE 72
++G+ + + R V++ ++EV E G V PFGS V N F G DLD+ ++
Sbjct: 166 LVGLRELSEAERQLRSLVVALMQEVF--TEFFPGCVVHPFGSSV-NSFDVHGCDLDLFLD 222
Query: 73 LSN 75
L +
Sbjct: 223 LGD 225
>UNIPROTKB|F1MG03 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9913 "Bos taurus" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR015880 PROSITE:PS50102 SMART:SM00355
SMART:SM00360 Pfam:PF03828 GO:GO:0005730 GO:GO:0000166
GO:GO:0016607 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0006378
GO:GO:0003730 GO:GO:0005847 GO:GO:0006379 GO:GO:0004652
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0016180 IPI:IPI00705794 UniGene:Bt.21690 OMA:EQQGCAG
EMBL:DAAA02063485 Ensembl:ENSBTAT00000015724 Uniprot:F1MG03
Length = 871
Score = 166 (63.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 45/142 (31%), Positives = 72/142 (50%)
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIH 124
GD ++EL+ A L+G +LR G YR +Q V AR P++KF
Sbjct: 318 GDQGKAVELAEALKGEKAEGGAMLELVGSILRGC-VPGVYR-VQTVPSARCPVVKFCHRP 375
Query: 125 QNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSL 184
+ DIS+ N S+FL S++DGR R +V ++ WA+ ++ N+Y+L
Sbjct: 376 SGLHGDISLSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGRGLSGSGP-LLNNYAL 434
Query: 185 SLLVLFHFQTCVPAILPPLKDI 206
+LLV++ QT P +LP + +
Sbjct: 435 TLLVIYFLQTRDPPVLPTVSQL 456
Score = 63 (27.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 7 LEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG- 65
+E + ++G+ + + R V++ ++EV E G V PFGS + N F G
Sbjct: 159 VEAQMVKLVGLRELSEAERQLRSLVVALMQEVF--AEFFPGCVVHPFGSSI-NSFDVHGC 215
Query: 66 DLDISIELSN 75
DLD+ ++L +
Sbjct: 216 DLDLFLDLGD 225
>UNIPROTKB|Q1JPD6 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] [GO:0016607 "nuclear
speck" evidence=ISS] [GO:0071044 "histone mRNA catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006378 "mRNA polyadenylation" evidence=ISS]
[GO:0006379 "mRNA cleavage" evidence=ISS] [GO:0016180 "snRNA
processing" evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0050265 "RNA uridylyltransferase
activity" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50102 PROSITE:PS50157
SMART:SM00355 SMART:SM00360 Pfam:PF03828 GO:GO:0005524
GO:GO:0005730 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730 GO:GO:0006379
eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GO:GO:0016180 EMBL:BT025417 IPI:IPI00705794 RefSeq:NP_001073791.1
UniGene:Bt.21690 ProteinModelPortal:Q1JPD6 SMR:Q1JPD6 STRING:Q1JPD6
GeneID:616339 KEGG:bta:616339 CTD:64852 HOVERGEN:HBG079670
InParanoid:Q1JPD6 OrthoDB:EOG480HWB NextBio:20900088 Uniprot:Q1JPD6
Length = 871
Score = 166 (63.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 45/142 (31%), Positives = 72/142 (50%)
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIH 124
GD ++EL+ A L+G +LR G YR +Q V AR P++KF
Sbjct: 318 GDQGKAVELAEALKGEKAEGGAMLELVGSILRGC-VPGVYR-VQTVPSARCPVVKFCHRP 375
Query: 125 QNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSL 184
+ DIS+ N S+FL S++DGR R +V ++ WA+ ++ N+Y+L
Sbjct: 376 SGLHGDISLSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGRGLSGSGP-LLNNYAL 434
Query: 185 SLLVLFHFQTCVPAILPPLKDI 206
+LLV++ QT P +LP + +
Sbjct: 435 TLLVIYFLQTRDPPVLPTVSQL 456
Score = 63 (27.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 7 LEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG- 65
+E + ++G+ + + R V++ ++EV E G V PFGS + N F G
Sbjct: 159 VEAQMVKLVGLRELSEAERQLRSLVVALMQEVF--AEFFPGCVVHPFGSSI-NSFDVHGC 215
Query: 66 DLDISIELSN 75
DLD+ ++L +
Sbjct: 216 DLDLFLDLGD 225
>UNIPROTKB|H3BRB1 [details] [associations]
symbol:MIR3654 "Protein MIR3654" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR015880
PROSITE:PS50102 SMART:SM00355 SMART:SM00360 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
EMBL:AP001363 EMBL:AP002990 ProteinModelPortal:H3BRB1 SMR:H3BRB1
Ensembl:ENST00000496634 HGNC:HGNC:38896 Bgee:H3BRB1 Uniprot:H3BRB1
Length = 525
Score = 160 (61.4 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 44/142 (30%), Positives = 72/142 (50%)
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIH 124
GDL + EL+ A L+G +LR G YR +Q V AR P++KF
Sbjct: 318 GDLGKASELAETPKEEKAEGAAMLELVGSILRGC-VPGVYR-VQTVPSARRPVVKFCHRP 375
Query: 125 QNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSL 184
+ D+S+ N S+FL S++DGR R +V ++ WA+ ++ ++Y+L
Sbjct: 376 SGLHGDVSLSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGRGLSGSGP-LLSNYAL 434
Query: 185 SLLVLFHFQTCVPAILPPLKDI 206
+LLV++ QT P +LP + +
Sbjct: 435 TLLVIYFLQTRDPPVLPTVSQL 456
Score = 62 (26.9 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 14 ILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG-DLDISIE 72
++G+ + + R V++ ++EV E G V PFGS + N F G DLD+ ++
Sbjct: 166 LVGLRELSEAERQLRSLVVALMQEVF--TEFFPGCVVHPFGSSI-NSFDVHGCDLDLFLD 222
Query: 73 LSN 75
L +
Sbjct: 223 LGD 225
>WB|WBGene00001596 [details] [associations]
symbol:gld-2 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:0006997 "nucleus organization"
evidence=IMP] [GO:0043631 "RNA polyadenylation" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] [GO:0031379 "RNA-directed RNA polymerase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IDA] Pfam:PF03828 GO:GO:0005524 GO:GO:0009792
GO:GO:0007126 GO:GO:0002009 GO:GO:0006898 GO:GO:0040010
GO:GO:0006915 GO:GO:0046872 GO:GO:0006397 GO:GO:0042127
GO:GO:0040035 GO:GO:0040020 GO:GO:0006997 GO:GO:0051302
GO:GO:0043186 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 KO:K14079 EMBL:AY125085
EMBL:FO081588 PIR:T32274 PIR:T32275 RefSeq:NP_001021844.1
RefSeq:NP_001021845.1 RefSeq:NP_491841.2 RefSeq:NP_491842.2
UniGene:Cel.9280 ProteinModelPortal:O17087 IntAct:O17087
STRING:O17087 PaxDb:O17087 PRIDE:O17087 EnsemblMetazoa:ZC308.1a
GeneID:172338 KEGG:cel:CELE_ZC308.1 UCSC:ZC308.1a CTD:172338
WormBase:ZC308.1a WormBase:ZC308.1b WormBase:ZC308.1c
WormBase:ZC308.1d InParanoid:O17087 OMA:MEDWELD NextBio:875101
GO:GO:0031379 Uniprot:O17087
Length = 1113
Score = 184 (69.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 67/258 (25%), Positives = 120/258 (46%)
Query: 5 NVLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRW 64
+VL + D ++ E + ++ + L + V L G V GS ++ +
Sbjct: 547 DVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYV--VGSSLNGFGNNS 604
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILK--FET 122
D+D+ + ++N +K ++ +L+ + Q + Q + A+VPIL+ F
Sbjct: 605 SDMDLCLMITN----KDLDQKNDAVVVLNLILSTLQYEKFVESQKLILAKVPILRINFAA 660
Query: 123 IHQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSY 182
+I+ D++ +N + L + S D R R +V +VKEWAK IN+ +F SY
Sbjct: 661 PFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDANKSSFTSY 720
Query: 183 SLSLLVLFHFQTCVPA-ILPPLKDIYPGNLVDDLKGVRANAERQIAEICAFNIARFSSDK 241
SL L+V+ HF C P +LP L+ YP + + N + E+ A +I + S+K
Sbjct: 721 SLVLMVI-HFLQCGPTKVLPNLQQSYPNRFSNKVDVRTLNVTMALEEV-ADDIDQSLSEK 778
Query: 242 YRKINRSSLAHLFVSFLE 259
++L L + FL+
Sbjct: 779 ------TTLGELLIGFLD 790
>UNIPROTKB|O17087 [details] [associations]
symbol:gld-2 "Poly(A) RNA polymerase gld-2" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF03828 GO:GO:0005524 GO:GO:0009792
GO:GO:0007126 GO:GO:0002009 GO:GO:0006898 GO:GO:0040010
GO:GO:0006915 GO:GO:0046872 GO:GO:0006397 GO:GO:0042127
GO:GO:0040035 GO:GO:0040020 GO:GO:0006997 GO:GO:0051302
GO:GO:0043186 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 KO:K14079 EMBL:AY125085
EMBL:FO081588 PIR:T32274 PIR:T32275 RefSeq:NP_001021844.1
RefSeq:NP_001021845.1 RefSeq:NP_491841.2 RefSeq:NP_491842.2
UniGene:Cel.9280 ProteinModelPortal:O17087 IntAct:O17087
STRING:O17087 PaxDb:O17087 PRIDE:O17087 EnsemblMetazoa:ZC308.1a
GeneID:172338 KEGG:cel:CELE_ZC308.1 UCSC:ZC308.1a CTD:172338
WormBase:ZC308.1a WormBase:ZC308.1b WormBase:ZC308.1c
WormBase:ZC308.1d InParanoid:O17087 OMA:MEDWELD NextBio:875101
GO:GO:0031379 Uniprot:O17087
Length = 1113
Score = 184 (69.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 67/258 (25%), Positives = 120/258 (46%)
Query: 5 NVLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRW 64
+VL + D ++ E + ++ + L + V L G V GS ++ +
Sbjct: 547 DVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYV--VGSSLNGFGNNS 604
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILK--FET 122
D+D+ + ++N +K ++ +L+ + Q + Q + A+VPIL+ F
Sbjct: 605 SDMDLCLMITN----KDLDQKNDAVVVLNLILSTLQYEKFVESQKLILAKVPILRINFAA 660
Query: 123 IHQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSY 182
+I+ D++ +N + L + S D R R +V +VKEWAK IN+ +F SY
Sbjct: 661 PFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDANKSSFTSY 720
Query: 183 SLSLLVLFHFQTCVPA-ILPPLKDIYPGNLVDDLKGVRANAERQIAEICAFNIARFSSDK 241
SL L+V+ HF C P +LP L+ YP + + N + E+ A +I + S+K
Sbjct: 721 SLVLMVI-HFLQCGPTKVLPNLQQSYPNRFSNKVDVRTLNVTMALEEV-ADDIDQSLSEK 778
Query: 242 YRKINRSSLAHLFVSFLE 259
++L L + FL+
Sbjct: 779 ------TTLGELLIGFLD 790
>UNIPROTKB|F1S4J1 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0031123 OMA:KYFALPH EMBL:CU694299 Ensembl:ENSSSCT00000011987
Uniprot:F1S4J1
Length = 1497
Score = 185 (70.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 54/206 (26%), Positives = 100/206 (48%)
Query: 5 NVLEPILKDILGMLNP-LREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSR 63
N+L+ + +P + ED + R + +L + + G + FGS + +
Sbjct: 1002 NILDQVCIQCYKDFSPTILED-QAREHIRQNLENFIR--QEFPGTKLSLFGSSKNGFGFK 1058
Query: 64 WGDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETI 123
DLD+ + + NG ++ G +++ +L R L++ G R + + A+VPI+KF +
Sbjct: 1059 QSDLDVCMTI-NG-LETAEGLDCVRTI-EELARVLKKHSGLRNILPITTAKVPIVKFFHL 1115
Query: 124 HQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYS 183
+ DIS+ N ++ L S ID R + + +K + K DI + G+ +SY+
Sbjct: 1116 RSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYA 1175
Query: 184 LSLLVLFHFQTCVPAILPPLKDIYPG 209
+L+VL+ Q P ++P L IY G
Sbjct: 1176 YTLMVLYFLQQRNPPVIPVLLQIYKG 1201
>SGD|S000005243 [details] [associations]
symbol:TRF5 "Non-canonical poly(A) polymerase" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IDA]
[GO:0071051 "polyadenylation-dependent snoRNA 3'-end processing"
evidence=IGI] [GO:0043629 "ncRNA polyadenylation" evidence=IGI]
[GO:0034475 "U4 snRNA 3'-end processing" evidence=IGI;IMP]
[GO:0007067 "mitosis" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0071035 "nuclear polyadenylation-dependent rRNA
catabolic process" evidence=IGI;IMP] [GO:0071036 "nuclear
polyadenylation-dependent snoRNA catabolic process" evidence=IGI]
[GO:0071037 "nuclear polyadenylation-dependent snRNA catabolic
process" evidence=IGI] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IGI]
[GO:0071039 "nuclear polyadenylation-dependent CUT catabolic
process" evidence=IGI] [GO:0071044 "histone mRNA catabolic process"
evidence=IGI] [GO:0071050 "snoRNA polyadenylation" evidence=IGI]
[GO:0071042 "nuclear polyadenylation-dependent mRNA catabolic
process" evidence=IGI] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IGI;ISS;IMP;IDA] [GO:0007049
"cell cycle" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
SGD:S000005243 Pfam:PF03828 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 EMBL:BK006947 GO:GO:0031499
GO:GO:0071039 GO:GO:0071035 GO:GO:0071036 GO:GO:0071037
GO:GO:0071038 GO:GO:0071044 EMBL:U23084 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 OrthoDB:EOG43BQXK GO:GO:0071042
GO:GO:0071051 GeneTree:ENSGT00400000022055 GO:GO:0034475
HOGENOM:HOG000246586 GO:GO:0071050 EMBL:U47282 EMBL:Z71575
PIR:S60401 RefSeq:NP_014100.2 ProteinModelPortal:P48561 SMR:P48561
IntAct:P48561 MINT:MINT-1776475 STRING:P48561 EnsemblFungi:YNL299W
GeneID:855417 KEGG:sce:YNL299W KO:K12596 OMA:DFNDERD NextBio:979271
Genevestigator:P48561 GermOnline:YNL299W Uniprot:P48561
Length = 642
Score = 180 (68.4 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 50/190 (26%), Positives = 93/190 (48%)
Query: 11 LKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDIS 70
+KD + ++P + + + R + I LR V+ + S A + FGSF ++L+ D+D
Sbjct: 180 IKDFVHYISPSKNEIKCRNRTIDKLRRAVKELWS--DADLHVFGSFATDLYLPGSDIDCV 237
Query: 71 IELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCD 130
+ N K ++ + +L R L+ KG R++ + RVPI+KF + D
Sbjct: 238 VNSRNRD-------KEDRNYIYELARHLKNKGLAIRMEVIVKTRVPIIKFIEPQSQLHID 290
Query: 131 ISIDNLCGQIKSKFLF-WISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVL 189
+S + G +K + W+ G R++VL++K++ + +NN TG +++ LV
Sbjct: 291 VSFERTNGLEAAKLIREWLRDSPG-LRELVLIIKQFLHSRRLNNVHTGGLGGFTVICLV- 348
Query: 190 FHFQTCVPAI 199
+ F P I
Sbjct: 349 YSFLNMHPRI 358
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 185 (70.2 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 62/220 (28%), Positives = 104/220 (47%)
Query: 43 ESLRGATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKG 102
E A++ +GSF+S L DLDI+ S+ +K + L + + L +
Sbjct: 2001 EGFATASINLYGSFLSGLSLNDSDLDINF---------SSTQKEDTTHLKQVYKYLNRSQ 2051
Query: 103 GYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLV 162
Y+ ++ A+VPI++F+ I I D+ ++ S L ID R RD+ LLV
Sbjct: 2052 LYKLIEKRISAKVPIIRFKEISSGIHFDMCFHSMMSYHNSLLLGEYCSIDKRCRDLALLV 2111
Query: 163 KEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAILPPLKDIYPGNLVDDLKGVRANA 222
K WA + D+NN TF+S+ L +V+ Q+ P ILP L+ L++ R
Sbjct: 2112 KWWAVSKDLNNAAEKTFSSFCLVNMVIHFLQSLNPPILPNLQTT-SNQLLEKYSTDRNLI 2170
Query: 223 ERQIAEICAFNIARF----SSDKYR-KINRSSLAHLFVSF 257
+ + I + ++ S +K+ K N+ ++A LF F
Sbjct: 2171 KLKSQTIVENYLVKYYDWSSFNKFEPKRNKLTIAQLFYQF 2210
>POMBASE|SPAC17H9.01 [details] [associations]
symbol:cid16 "poly(A) polymerase Cid16 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=NAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002934 Pfam:PF01909
PomBase:SPAC17H9.01 Pfam:PF03828 GO:GO:0005737 EMBL:CU329670
GO:GO:0051301 GO:GO:0007067 GenomeReviews:CU329670_GR
eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058 PIR:T37867
RefSeq:NP_593571.1 ProteinModelPortal:O13798
EnsemblFungi:SPAC17H9.01.1 GeneID:2542188 KEGG:spo:SPAC17H9.01
OrthoDB:EOG40W00S NextBio:20803258 Uniprot:O13798
Length = 1202
Score = 180 (68.4 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 57/191 (29%), Positives = 95/191 (49%)
Query: 19 NPLREDW--ETRMKVISDLREVVESVESLRGAT-VEPFGSFVSNLFSRWGDLDISIELSN 75
N +R D T MK I ++++++S+ L G + FGS+ + L ++ DLD+ I S+
Sbjct: 892 NDIRPDTVRTTAMKAI--IKKLLKSLRKLEGPVKIACFGSYRTGLMTKNSDLDLVI-YSS 948
Query: 76 GSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDN 135
+ +VK + + + +G AR+PI+KF T NI CD+S DN
Sbjct: 949 KEALLPYYDRVKSIIKNEFSNVMPIRG----------ARIPIIKF-TGQYNIHCDLSFDN 997
Query: 136 LCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTC 195
L S + S ID R + +++LVK WA I+ +SY+ ++V+F+ Q
Sbjct: 998 LLPIHNSDLILNYSLIDERVKTLLMLVKYWASNRLIDKTHHAFPSSYTWCIMVIFYLQQI 1057
Query: 196 VPAILPPLKDI 206
ILP L+ +
Sbjct: 1058 PEPILPNLQKL 1068
>UNIPROTKB|D2HS90 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9646 "Ailuropoda melanoleuca" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0006378 "mRNA polyadenylation" evidence=ISS] [GO:0006379 "mRNA
cleavage" evidence=ISS] [GO:0016180 "snRNA processing"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=ISS] [GO:0050265
"RNA uridylyltransferase activity" evidence=ISS] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50102 PROSITE:PS50157
SMART:SM00355 SMART:SM00360 Pfam:PF03828 GO:GO:0005524
GO:GO:0005730 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730 GO:GO:0005847
GO:GO:0006379 GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GO:GO:0016180 EMBL:GL193267 ProteinModelPortal:D2HS90
HOGENOM:HOG000115998 Uniprot:D2HS90
Length = 869
Score = 161 (61.7 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 43/142 (30%), Positives = 72/142 (50%)
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIH 124
GDL ++EL+ L+G +LR G YR +Q V AR P++KF
Sbjct: 317 GDLGKALELAEALSGEKTEGVAMLELVGSILRGC-VPGVYR-VQTVPSARRPVVKFCHRP 374
Query: 125 QNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSL 184
+ D+S+ N S+FL S++DGR R +V ++ WA+ ++ ++Y+L
Sbjct: 375 SGLHGDVSLSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGRGLSGSGP-LLSNYAL 433
Query: 185 SLLVLFHFQTCVPAILPPLKDI 206
+LLV++ QT P +LP + +
Sbjct: 434 TLLVIYFLQTRDPPVLPTVSQL 455
Score = 61 (26.5 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 14 ILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG-DLDISIE 72
++G+ + + R V++ ++EV E G V PFGS + N F G DLD+ ++
Sbjct: 166 LVGLRELSEAERQLRNLVVALMQEVF--TEFFPGCVVHPFGSSI-NSFDVHGCDLDLFLD 222
Query: 73 LSN 75
L +
Sbjct: 223 LGD 225
>UNIPROTKB|Q9H6E5 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003730 "mRNA
3'-UTR binding" evidence=IDA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=IMP;IDA] [GO:0006379
"mRNA cleavage" evidence=IDA] [GO:0050265 "RNA uridylyltransferase
activity" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016180 "snRNA processing" evidence=IMP] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0071044 "histone
mRNA catabolic process" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50102 PROSITE:PS50157 SMART:SM00355 SMART:SM00360
Pfam:PF03828 GO:GO:0005524 GO:GO:0005730 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 EMBL:CH471076 Gene3D:3.30.70.330
GO:GO:0006378 GO:GO:0003730 GO:GO:0006379 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265 GO:GO:0016180
HOGENOM:HOG000115998 CTD:64852 HOVERGEN:HBG079670 OrthoDB:EOG480HWB
EMBL:AK025920 EMBL:AK026000 EMBL:AK292610 EMBL:AP002990
EMBL:BC005013 EMBL:BC110910 EMBL:BC128263 IPI:IPI01012096
RefSeq:NP_073741.2 UniGene:Hs.728983 PDB:2E5G PDBsum:2E5G
ProteinModelPortal:Q9H6E5 SMR:Q9H6E5 IntAct:Q9H6E5 STRING:Q9H6E5
DMDM:126302611 PaxDb:Q9H6E5 PRIDE:Q9H6E5 Ensembl:ENST00000476907
GeneID:64852 KEGG:hsa:64852 GeneCards:GC11M062342 HGNC:HGNC:26184
MIM:610641 neXtProt:NX_Q9H6E5 PharmGKB:PA162407405
InParanoid:Q9H6E5 EvolutionaryTrace:Q9H6E5 GenomeRNAi:64852
NextBio:66977 ArrayExpress:Q9H6E5 Bgee:Q9H6E5 CleanEx:HS_TUT1
Genevestigator:Q9H6E5 GermOnline:ENSG00000149016 Uniprot:Q9H6E5
Length = 874
Score = 160 (61.4 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 44/142 (30%), Positives = 72/142 (50%)
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIH 124
GDL + EL+ A L+G +LR G YR +Q V AR P++KF
Sbjct: 318 GDLGKASELAETPKEEKAEGAAMLELVGSILRGC-VPGVYR-VQTVPSARRPVVKFCHRP 375
Query: 125 QNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSL 184
+ D+S+ N S+FL S++DGR R +V ++ WA+ ++ ++Y+L
Sbjct: 376 SGLHGDVSLSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGRGLSGSGP-LLSNYAL 434
Query: 185 SLLVLFHFQTCVPAILPPLKDI 206
+LLV++ QT P +LP + +
Sbjct: 435 TLLVIYFLQTRDPPVLPTVSQL 456
Score = 62 (26.9 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 14 ILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG-DLDISIE 72
++G+ + + R V++ ++EV E G V PFGS + N F G DLD+ ++
Sbjct: 166 LVGLRELSEAERQLRSLVVALMQEVF--TEFFPGCVVHPFGSSI-NSFDVHGCDLDLFLD 222
Query: 73 LSN 75
L +
Sbjct: 223 LGD 225
>UNIPROTKB|F5H0R1 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR015880 PROSITE:PS50102 SMART:SM00355
SMART:SM00360 Pfam:PF03828 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 InterPro:IPR002058
CTD:64852 EMBL:AP002990 RefSeq:NP_073741.2 UniGene:Hs.728983
GeneID:64852 KEGG:hsa:64852 HGNC:HGNC:26184 GenomeRNAi:64852
NextBio:66977 OMA:EQQGCAG IPI:IPI00946813 ProteinModelPortal:F5H0R1
SMR:F5H0R1 PhosphoSite:F5H0R1 PRIDE:F5H0R1 Ensembl:ENST00000308436
UCSC:uc001nto.2 ArrayExpress:F5H0R1 Bgee:F5H0R1 Uniprot:F5H0R1
Length = 912
Score = 160 (61.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 44/142 (30%), Positives = 72/142 (50%)
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIH 124
GDL + EL+ A L+G +LR G YR +Q V AR P++KF
Sbjct: 356 GDLGKASELAETPKEEKAEGAAMLELVGSILRGC-VPGVYR-VQTVPSARRPVVKFCHRP 413
Query: 125 QNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSL 184
+ D+S+ N S+FL S++DGR R +V ++ WA+ ++ ++Y+L
Sbjct: 414 SGLHGDVSLSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGRGLSGSGP-LLSNYAL 472
Query: 185 SLLVLFHFQTCVPAILPPLKDI 206
+LLV++ QT P +LP + +
Sbjct: 473 TLLVIYFLQTRDPPVLPTVSQL 494
Score = 62 (26.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 14 ILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG-DLDISIE 72
++G+ + + R V++ ++EV E G V PFGS + N F G DLD+ ++
Sbjct: 204 LVGLRELSEAERQLRSLVVALMQEVF--TEFFPGCVVHPFGSSI-NSFDVHGCDLDLFLD 260
Query: 73 LSN 75
L +
Sbjct: 261 LGD 263
>UNIPROTKB|Q2KEW4 [details] [associations]
symbol:MGCH7_ch7g922 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
EMBL:CM000230 InterPro:IPR002058 GO:GO:0016779
ProteinModelPortal:Q2KEW4 Uniprot:Q2KEW4
Length = 1474
Score = 180 (68.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 61/246 (24%), Positives = 111/246 (45%)
Query: 11 LKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDIS 70
++++ L P + R K+I L ++ V FGS + L S D+DI
Sbjct: 432 MRELFDRLKPTEKVKANRDKLIKKLEKMFNDQWPGHSIKVHLFGSSGNKLCSDDSDVDI- 490
Query: 71 IELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCD 130
CI++ K+++ + + L QK G ++ V+ A+VPI+K ++CD
Sbjct: 491 -------CITTDWKELENVCM---IAQLLQKRGMEKVVCVSSAKVPIVKIWDPELGLACD 540
Query: 131 ISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTG-TFNSYSLSLLVL 189
++++N ++ + +ID R R + ++VK W + IN+ G T +SY+ +++
Sbjct: 541 MNVNNTLALENTRMVLTYVEIDERVRTLAMIVKHWTRRRTINDAAFGGTLSSYTWICMII 600
Query: 190 FHFQTCVPAILPPL----------KDIYPGNLVDDL---KGVRANAERQIAEICAFNIAR 236
Q P ILP L KD P DDL +G + + E+ F+ R
Sbjct: 601 AFLQLRDPPILPALHQNPHKKQTSKDGQPSEFADDLTKLRGYGGKNKETLGELL-FHFFR 659
Query: 237 FSSDKY 242
F + ++
Sbjct: 660 FYAHEF 665
>UNIPROTKB|F1NBW0 [details] [associations]
symbol:MTPAP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0002134 "UTP binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0071044
"histone mRNA catabolic process" evidence=IEA] Pfam:PF03828
GO:GO:0005739 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0000287 GO:GO:0006378 GO:GO:0030145
GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GeneTree:ENSGT00550000074490 GO:GO:0002134 OMA:VRCWARA
EMBL:AADN02000527 EMBL:AADN02000528 IPI:IPI00597569
Ensembl:ENSGALT00000011888 Uniprot:F1NBW0
Length = 518
Score = 163 (62.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 48/174 (27%), Positives = 83/174 (47%)
Query: 89 SLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKSKFLFWI 148
S++GD L GY +Q + +AR P++KF CD+S+ N S+ L+
Sbjct: 230 SIIGDCLDNFGP--GYSSVQKILNARCPLVKFSHQPTGFQCDLSVSNSIAIRCSELLYIY 287
Query: 149 SQIDGRFRDMVLLVKEWAKAHDINNPKTGTF-NSYSLSLLVLFHFQTCVPAILPPLKDIY 207
+D R R +V ++ WA+ H + N GT+ ++SL+++++F Q P I+P L
Sbjct: 288 GCLDPRVRALVFSLRCWARVHGLTNSVPGTWITNFSLTMMIMFFLQKRSPPIIPTL---- 343
Query: 208 PGNLVDDLKGVRANAERQI--AEICAFNIARFSSDKYRKINRSSLAHLFVSFLE 259
D LK + ++ + C+F ++ S K K N +L L F +
Sbjct: 344 -----DQLKELADEKDKHVIGGYDCSF-VSDLSKIKPTK-NTETLDELLCDFFQ 390
Score = 51 (23.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 48 ATVEPFGSFVSNLFSRWG-DLDISIE 72
+TV+PFGS V N F + G D+D+ ++
Sbjct: 169 STVKPFGSSV-NTFGKLGCDVDMFLD 193
>CGD|CAL0005626 [details] [associations]
symbol:orf19.429 species:5476 "Candida albicans" [GO:0031125
"rRNA 3'-end processing" evidence=IEA] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0071036 "nuclear
polyadenylation-dependent snoRNA catabolic process" evidence=IEA]
[GO:0071050 "snoRNA polyadenylation" evidence=IEA] [GO:0071035
"nuclear polyadenylation-dependent rRNA catabolic process"
evidence=IEA] [GO:0071039 "nuclear polyadenylation-dependent CUT
catabolic process" evidence=IEA] [GO:0071044 "histone mRNA
catabolic process" evidence=IEA] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IEA]
[GO:0071042 "nuclear polyadenylation-dependent mRNA catabolic
process" evidence=IEA] [GO:0071037 "nuclear
polyadenylation-dependent snRNA catabolic process" evidence=IEA]
[GO:0071040 "nuclear polyadenylation-dependent antisense transcript
catabolic process" evidence=IEA] [GO:0007000 "nucleolus
organization" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0071051 "polyadenylation-dependent snoRNA 3'-end
processing" evidence=IEA] [GO:0071031 "nuclear mRNA surveillance of
mRNA 3'-end processing" evidence=IEA] [GO:0034475 "U4 snRNA 3'-end
processing" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0051575
"5'-deoxyribose-5-phosphate lyase activity" evidence=IEA]
[GO:0031499 "TRAMP complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 CGD:CAL0005626
Pfam:PF03828 eggNOG:COG5260 InterPro:IPR002058 KO:K03514
GO:GO:0016779 EMBL:AACQ01000078 EMBL:AACQ01000077
RefSeq:XP_715864.1 RefSeq:XP_715914.1 ProteinModelPortal:Q5A2B2
STRING:Q5A2B2 GeneID:3642450 GeneID:3642482 KEGG:cal:CaO19.429
KEGG:cal:CaO19.8059 Uniprot:Q5A2B2
Length = 603
Score = 174 (66.3 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 50/190 (26%), Positives = 94/190 (49%)
Query: 11 LKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDIS 70
+KD + ++P E+ TR VIS L++ E + G FGS ++L+ D+D+
Sbjct: 173 MKDFVNYISPSSEEIVTRNNVISTLKK--EIGKFWPGTETHVFGSCATDLYLPGSDIDMV 230
Query: 71 IELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCD 130
+ +S G +S L L LR K + ++ +A A+VPI+KF + D
Sbjct: 231 V-------VSETGDYENRSRLYQLSTFLRTKKLAKNVEVIASAKVPIIKFVDPVSELHID 283
Query: 131 ISIDNLCGQIKSKFLF-WISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVL 189
+S + G +K + W+ G R++VL++K++ ++ +NN G Y+ ++++
Sbjct: 284 VSFERTNGLDAAKRIRRWLISTPG-LRELVLVIKQFLRSRRLNNVHVGGLGGYA-TIIMC 341
Query: 190 FHFQTCVPAI 199
+HF P +
Sbjct: 342 YHFLRLHPKL 351
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 181 (68.8 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 60/255 (23%), Positives = 117/255 (45%)
Query: 11 LKDILGMLNPLREDWETRMKVISD--LREVVESV-ESLRGATVEPFGSFVSNLFSRWGDL 67
L + L L + + E + K I + + + + + + + FGSF+S L D+
Sbjct: 4211 LPNTLKKLYSIAKSKECKKKTIKEESFKRLTQYLLDGFSSGKLNIFGSFLSGLSLGESDI 4270
Query: 68 DISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNI 127
D++ + IS+ +KQ + + K Y ++ ARVPI++F N+
Sbjct: 4271 DVNFTTTQKEDIST----IKQ------VSSFLHKKNYELIETRLEARVPIIRFIDTDVNV 4320
Query: 128 SCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLL 187
D+ ++ GQ S + + +D R + +++L+K WA +N+ +F+SY L L
Sbjct: 4321 RFDMCFNSFMGQHNSLLIKDYTMVDSRVKPLIILIKWWASTKCLNDASQESFSSYCLINL 4380
Query: 188 VLFHFQTCVPAILPPLKDIYPGNLVDDLK-GVRANA--ERQIAEICAFNIARFSSDKYRK 244
++ Q+ P +LP L++ P + D+ K ++AN E + + + F+S
Sbjct: 4381 IIHFLQSLSPPVLPNLQEPSPFHF-DETKIKLKANCRVENNVVKYYDWTSLDFTSAD--- 4436
Query: 245 INRSSLAHLFVSFLE 259
NR ++ L F +
Sbjct: 4437 -NRLNIGQLLFKFFQ 4450
>POMBASE|SPAC19D5.03 [details] [associations]
symbol:cid1 "poly(A) polymerase Cid1" species:4896
"Schizosaccharomyces pombe" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0033314 "mitotic DNA
replication checkpoint" evidence=IMP] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050265 "RNA uridylyltransferase activity"
evidence=IDA] [GO:0071076 "RNA 3' uridylation" evidence=IDA]
InterPro:IPR002934 Pfam:PF01909 PomBase:SPAC19D5.03 Pfam:PF03828
GO:GO:0005829 EMBL:CU329670 GO:GO:0051301 GO:GO:0007067
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0033314
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0043631 EMBL:AF105076
PIR:T37963 RefSeq:NP_594901.1 PDB:4E7X PDB:4E80 PDB:4E8F PDB:4EP7
PDB:4FH3 PDB:4FH5 PDB:4FHP PDB:4FHV PDB:4FHW PDB:4FHX PDB:4FHY
PDBsum:4E7X PDBsum:4E80 PDBsum:4E8F PDBsum:4EP7 PDBsum:4FH3
PDBsum:4FH5 PDBsum:4FHP PDBsum:4FHV PDBsum:4FHW PDBsum:4FHX
PDBsum:4FHY ProteinModelPortal:O13833 STRING:O13833
EnsemblFungi:SPAC19D5.03.1 GeneID:2542420 KEGG:spo:SPAC19D5.03
OMA:DMARIRG OrthoDB:EOG4S7P0J NextBio:20803478 GO:GO:0050265
GO:GO:0071076 Uniprot:O13833
Length = 405
Score = 169 (64.5 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 52/199 (26%), Positives = 95/199 (47%)
Query: 23 EDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSA 82
++++ + + LR ++ + A + FGS S L + D+D+ + + + +
Sbjct: 60 KEFKEKRAALDTLRLCLKRISP--DAELVAFGSLESGLALKNSDMDLCVLMDSRVQSDTI 117
Query: 83 GKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQN-----ISCDISIDNLC 137
+ + L+ + G+ +F+ AR+PI+K + +N CDI +N
Sbjct: 118 ALQFYEELIAE---------GFEG-KFLQRARIPIIKLTSDTKNGFGASFQCDIGFNNRL 167
Query: 138 GQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVP 197
+ L +++D R + MVLLVK WAK IN+P GT +SY L+VL++ +
Sbjct: 168 AIHNTLLLSSYTKLDARLKPMVLLVKHWAKRKQINSPYFGTLSSYGYVLMVLYYL---IH 224
Query: 198 AILPPLKDIYPGNLVDDLK 216
I PP ++P L+ LK
Sbjct: 225 VIKPP---VFPNLLLSPLK 240
>WB|WBGene00019629 [details] [associations]
symbol:cid-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0050265 "RNA uridylyltransferase
activity" evidence=IDA] [GO:0071076 "RNA 3' uridylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P
granule" evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] InterPro:IPR001878 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR017896 PROSITE:PS00028
PROSITE:PS51379 SMART:SM00343 SMART:SM00355 Pfam:PF03828
GO:GO:0048471 GO:GO:0008270 GO:GO:0000003 GO:GO:0003676
GO:GO:0051536 GO:GO:0000794 Gene3D:4.10.60.10 GO:GO:0043186
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0050265 GO:GO:0071076
GeneTree:ENSGT00550000074490 EMBL:FO081618 PIR:C88451
RefSeq:NP_498099.1 ProteinModelPortal:Q09409 IntAct:Q09409
STRING:Q09409 PaxDb:Q09409 EnsemblMetazoa:K10D2.3 GeneID:175707
KEGG:cel:CELE_K10D2.3 UCSC:K10D2.3 CTD:175707 WormBase:K10D2.3
InParanoid:Q09409 OMA:CSDIDIC NextBio:889300 Uniprot:Q09409
Length = 1425
Score = 175 (66.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 64/262 (24%), Positives = 123/262 (46%)
Query: 11 LKDILGMLNPLREDW---ETRMKVISDLREVVESV--ESLR-GATVEPFGSFVSNLFSRW 64
LKDI M++ + E R+K++ + ++S ++ R T+ FGS ++ L
Sbjct: 1006 LKDIDDMIDKYYHENILDERRLKMLDHKIDELQSFLRKNYREDVTLTTFGSVMTGLSVNC 1065
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIH 124
D+DI + +G + K+ ++ LR+ +R+Q + A+VPI+KF+
Sbjct: 1066 SDIDICLRFGDGD-VPPKDLTAKE-VIQKTESVLRKCHLVKRVQAIVTAKVPIVKFQVKL 1123
Query: 125 QN---ISCDISIDNLCGQIKSKFL--FWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTF 179
N I DIS N+ + L + + D RF + L VK WAK +I + G+
Sbjct: 1124 SNGAIIDVDISYYNILAIYNTALLKEYSLWTPDKRFAKLALFVKTWAKNCEIGDASRGSL 1183
Query: 180 NSYSLSLLVLFHFQTCVPAILPPLKDIYPGNLVDDLKGVRANAERQIAEICAFNIARFSS 239
+SY ++++ + Q C P +LP L++ + + N ER++ + + A+ +
Sbjct: 1184 SSYCHVIMLISYLQNCDPPVLPRLQEDFRSD----------NRERRLVDNWDTSFAQVET 1233
Query: 240 DKYRKI--NRSSLAHLFVSFLE 259
++ N+ S A L + + +
Sbjct: 1234 SLLQRWPKNKESCAQLLIGYFD 1255
>ZFIN|ZDB-GENE-050706-68 [details] [associations]
symbol:tut1 "terminal uridylyl transferase 1, U6
snRNA-specific" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IEA;ISS] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS]
[GO:0016607 "nuclear speck" evidence=ISS] [GO:0016180 "snRNA
processing" evidence=ISS] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=ISS]
[GO:0006378 "mRNA polyadenylation" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR007087 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50102 PROSITE:PS50157
SMART:SM00355 SMART:SM00360 Pfam:PF03828 ZFIN:ZDB-GENE-050706-68
GO:GO:0005524 GO:GO:0005730 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730
GO:GO:0006379 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0050265 GO:GO:0016180 HOGENOM:HOG000115998 CTD:64852
HOVERGEN:HBG079670 OrthoDB:EOG480HWB EMBL:BC098614 IPI:IPI00619608
RefSeq:NP_001025359.1 UniGene:Dr.80967 ProteinModelPortal:Q4KMD7
GeneID:564388 KEGG:dre:564388 InParanoid:Q4KMD7 NextBio:20885359
ArrayExpress:Q4KMD7 Uniprot:Q4KMD7
Length = 797
Score = 159 (61.0 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 36/107 (33%), Positives = 59/107 (55%)
Query: 103 GYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLV 162
G ++Q ++ AR+P++KF N+ DI+I+N +KFL S ID R R +V +
Sbjct: 281 GVHKVQALSTARLPVVKFSHKELNLQGDITINNRLAVRNTKFLQLCSGIDSRLRPLVYTI 340
Query: 163 KEWAKAHDINNPKTGT---FNSYSLSLLVLFHFQTCVPAILPPLKDI 206
+ WAK + +G N+Y+L+LLV+F Q P +LP + +
Sbjct: 341 RLWAKQKQLAGNLSGPGPLLNNYALTLLVIFFLQNRDPPVLPSVNQL 387
Score = 56 (24.8 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 22/85 (25%), Positives = 38/85 (44%)
Query: 5 NVLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRW 64
+V E I K ++ L + + R ++ L+EV E + PFGS V+
Sbjct: 158 SVNEQIQK-VVESLELKDNEKKVRDLLVQLLQEVF--TEFFPDCQIVPFGSSVNTFGLHS 214
Query: 65 GDLDISIELSNGSCISSAGKKVKQS 89
DLD+ ++L N + K +Q+
Sbjct: 215 CDLDLFLDLENTKVFQARAKSSEQT 239
>WB|WBGene00009284 [details] [associations]
symbol:F31C3.2 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] Pfam:PF03828 GO:GO:0045132
InterPro:IPR002058 EMBL:Z92784 GeneTree:ENSGT00550000074490
EMBL:Z81526 UniGene:Cel.7025 GeneID:173373 KEGG:cel:CELE_F31C3.2
CTD:173373 NextBio:879379 RefSeq:NP_001021434.1
ProteinModelPortal:G5EFR3 SMR:G5EFR3 IntAct:G5EFR3 PRIDE:G5EFR3
EnsemblMetazoa:F31C3.2b WormBase:F31C3.2b OMA:PFDAINT
Uniprot:G5EFR3
Length = 808
Score = 172 (65.6 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 60/201 (29%), Positives = 96/201 (47%)
Query: 26 ETRMKVISDLREVVESVE---SLRGATVEPFGSFVSNLFSRWGDLDISIELSNGS----C 78
E R K+ S+++++ E G+TV GSF S++ DL + +NG C
Sbjct: 486 EARQKLFSEIKKLFPDTEIKLQTTGSTVNGCGSFNSDM-----DLCLCFP-TNGYKGQVC 539
Query: 79 IS-SAGKKVKQSLLGDLLRALRQ-------KGGYRRLQFVAHARVPILKF--ETIHQNIS 128
+ +L + +A R+ K + +Q V A+VPI+K I
Sbjct: 540 DDFHCDRNYSTKILRKIDKAFRRSHWSHPLKKIIKTMQLVP-AKVPIVKMILNGEFDGIE 598
Query: 129 CDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLV 188
DI+++N+ G S + + S D R + LLVK WA INN + G NSY+ LLV
Sbjct: 599 VDINVNNIAGIYNSHLIHYYSLTDARLPALALLVKHWAMVTGINNAQDGFLNSYTTILLV 658
Query: 189 LFHFQTCV-PAILPPLKDIYP 208
+ + Q V PA++P L+ ++P
Sbjct: 659 VHYLQCGVTPAVIPNLQYLFP 679
>MGI|MGI:1917294 [details] [associations]
symbol:Tut1 "terminal uridylyl transferase 1, U6
snRNA-specific" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO]
[GO:0003730 "mRNA 3'-UTR binding" evidence=ISO] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006378 "mRNA polyadenylation"
evidence=ISO] [GO:0006379 "mRNA cleavage" evidence=ISO] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50102 PROSITE:PS50157 SMART:SM00355 SMART:SM00360
MGI:MGI:1917294 Pfam:PF03828 GO:GO:0005524 GO:GO:0005730
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0006378 GO:GO:0003730 GO:GO:0006379 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0016180 CTD:64852
HOVERGEN:HBG079670 OrthoDB:EOG480HWB EMBL:AK138418 EMBL:BC023900
EMBL:BC025499 IPI:IPI00153749 IPI:IPI00798562 RefSeq:NP_932110.1
UniGene:Mm.165979 ProteinModelPortal:Q8R3F9 SMR:Q8R3F9
STRING:Q8R3F9 PhosphoSite:Q8R3F9 PaxDb:Q8R3F9 PRIDE:Q8R3F9
Ensembl:ENSMUST00000096239 GeneID:70044 KEGG:mmu:70044
UCSC:uc008gog.1 UCSC:uc008goh.1 InParanoid:Q8R3F9 OMA:EQQGCAG
NextBio:330881 Bgee:Q8R3F9 Genevestigator:Q8R3F9
GermOnline:ENSMUSG00000071645 Uniprot:Q8R3F9
Length = 869
Score = 154 (59.3 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 39/117 (33%), Positives = 65/117 (55%)
Query: 90 LLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKSKFLFWIS 149
L+G +LR G YR +Q V AR P++KF + D+S+ N S+FL S
Sbjct: 346 LVGSILRGC-VPGVYR-VQTVPSARRPVVKFCHRPSGLHGDVSLSNRLALYNSRFLNLCS 403
Query: 150 QIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAILPPLKDI 206
++DGR R +V ++ WA+ + ++ N+Y+L+LLV++ QT P +LP + +
Sbjct: 404 EMDGRVRPLVYTLRCWAQHNGLSGGGP-LLNNYALTLLVIYFLQTRDPPVLPTVAQL 459
Score = 59 (25.8 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 18 LNPLRE-DWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG-DLDISIELSN 75
L L E + + R V++ ++EV E G V PFGS V N F G DLD+ +++ +
Sbjct: 169 LRELSEAERQLRNLVVALMQEVF--TEFFPGCVVHPFGSTV-NSFDVHGCDLDLFLDMGD 225
>UNIPROTKB|A9JTS5 [details] [associations]
symbol:tut1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0003730 "mRNA 3'-UTR
binding" evidence=ISS] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0006378 "mRNA polyadenylation" evidence=ISS]
[GO:0006379 "mRNA cleavage" evidence=ISS] [GO:0016180 "snRNA
processing" evidence=ISS] [GO:0016607 "nuclear speck" evidence=ISS]
[GO:0050265 "RNA uridylyltransferase activity" evidence=ISS]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR007087
InterPro:IPR012677 InterPro:IPR015880 Pfam:PF00076 PROSITE:PS00028
PROSITE:PS50102 PROSITE:PS50157 SMART:SM00355 SMART:SM00360
Pfam:PF03828 GO:GO:0005524 GO:GO:0005730 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0006378
GO:GO:0003730 GO:GO:0006379 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 GO:GO:0050265 GO:GO:0016180 HOGENOM:HOG000115998
HOVERGEN:HBG079670 EMBL:BC155457 UniGene:Str.66101
ProteinModelPortal:A9JTS5 STRING:A9JTS5 Xenbase:XB-GENE-491663
Uniprot:A9JTS5
Length = 843
Score = 142 (55.0 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 35/104 (33%), Positives = 54/104 (51%)
Query: 103 GYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLV 162
G +Q V AR P++ F+ + D++++N S FL S +D R +V V
Sbjct: 316 GVHGVQSVPTARRPVIHFQHKTSGLRGDVTLNNRLALRNSSFLRLCSDLDARVPQLVYTV 375
Query: 163 KEWAKAHDI-NNPKTG--TFNSYSLSLLVLFHFQTCVPAILPPL 203
+ WA+ + + NP G N+Y+L+LLV F QT P +LP L
Sbjct: 376 RYWARVNQLAGNPFGGGPLLNNYALTLLVFFFLQTRNPPVLPTL 419
Score = 71 (30.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 21/82 (25%), Positives = 39/82 (47%)
Query: 7 LEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGD 66
+E +K ++ + +P + R ++S L+E E G + PFGS V+ D
Sbjct: 169 VEQQIKKLVSLCSPSHHESHLRELLLSLLQETF--TEFFPGCQLLPFGSSVNGFEISGCD 226
Query: 67 LDISIELSNGSCISSAGKKVKQ 88
LD+ ++L + + GK K+
Sbjct: 227 LDLYLDLGDDEAENVEGKAEKE 248
>RGD|1561043 [details] [associations]
symbol:Tut1 "terminal uridylyl transferase 1, U6 snRNA-specific"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=ISO;ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISO;ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISO;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO;ISS] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=ISO;ISS] [GO:0006378 "mRNA polyadenylation"
evidence=ISO;ISS] [GO:0006379 "mRNA cleavage" evidence=ISO;ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016180 "snRNA
processing" evidence=ISO;ISS] [GO:0016607 "nuclear speck"
evidence=ISO;ISS] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0050265 "RNA uridylyltransferase activity" evidence=ISO;ISS]
[GO:0071044 "histone mRNA catabolic process" evidence=ISO;ISS]
InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50102 PROSITE:PS50157 SMART:SM00355
SMART:SM00360 Pfam:PF03828 RGD:1561043 GO:GO:0005524 GO:GO:0005730
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0006378 GO:GO:0003730 GO:GO:0006379 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0016180 CTD:64852
HOVERGEN:HBG079670 OrthoDB:EOG480HWB OMA:EQQGCAG EMBL:BC104695
IPI:IPI00371444 RefSeq:NP_001029073.1 UniGene:Rn.129389
ProteinModelPortal:Q3MHT4 SMR:Q3MHT4 IntAct:Q3MHT4 STRING:Q3MHT4
PhosphoSite:Q3MHT4 PRIDE:Q3MHT4 Ensembl:ENSRNOT00000027187
GeneID:499314 KEGG:rno:499314 UCSC:RGD:1561043 InParanoid:Q3MHT4
NextBio:702524 Genevestigator:Q3MHT4 GermOnline:ENSRNOG00000020047
Uniprot:Q3MHT4
Length = 866
Score = 150 (57.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 42/136 (30%), Positives = 69/136 (50%)
Query: 71 IELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCD 130
+EL+ S L+G +LR G YR +Q V AR P++KF + D
Sbjct: 325 LELAEASKDEKEEATAVLELVGSILRGC-VPGVYR-VQTVPSARRPVVKFCHRPSGLHGD 382
Query: 131 ISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLF 190
IS+ N S+FL S++D R R +V ++ WA+ + ++ N+Y+L+LLV++
Sbjct: 383 ISLSNRLALYNSRFLNLCSEMDSRVRPLVYTLRCWAQHNGLSGGGP-LLNNYALTLLVIY 441
Query: 191 HFQTCVPAILPPLKDI 206
QT P +LP + +
Sbjct: 442 FLQTRDPPVLPTVAQL 457
Score = 62 (26.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 18 LNPLRE-DWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG-DLDISIELSN 75
L L E + + R V++ ++EV E G V PFGS V N F G DLD+ ++L +
Sbjct: 169 LRELSEAERQLRTLVVALMQEVF--TEFFPGCVVHPFGSSV-NSFDVHGCDLDLFLDLGD 225
>DICTYBASE|DDB_G0295737 [details] [associations]
symbol:DDB_G0295737 "PAP/25A-associated
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 dictyBase:DDB_G0295737 Pfam:PF03828
EMBL:AAFI02000149 InterPro:IPR002058 GO:GO:0016779
RefSeq:XP_002649102.1 EnsemblProtists:DDB0252871 GeneID:8627367
KEGG:ddi:DDB_G0295737 OMA:NIDICFD Uniprot:C7G070
Length = 938
Score = 168 (64.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 48/177 (27%), Positives = 88/177 (49%)
Query: 18 LNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIE-LSNG 76
L P + R K+I DL +V+S + A V FGSF SNLF D+DI I ++N
Sbjct: 457 LEPSELESRIRQKIIRDLDAIVKS--NWPKANVVVFGSFSSNLFIPSSDIDIQISGINNA 514
Query: 77 SCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNL 136
++ + + L ++R + + ++ + A+VPI+K + H + + DI D
Sbjct: 515 ESVNKYNQNPIRDLFDIIIR--NHQDSFINVRNIFGAKVPIIKMTSSHSHYNIDICFDTP 572
Query: 137 CGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQ 193
G + + + + R ++L++K + +++N TG SY+L+L+V+ Q
Sbjct: 573 NGIENTAVVKGLLKQYKSMRTLLLIIKFFLHQNNLNETYTGGIGSYALALMVVSFIQ 629
>UNIPROTKB|F6X6U9 [details] [associations]
symbol:MIR3654 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS50102 SMART:SM00355 SMART:SM00360
Pfam:PF03828 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 InterPro:IPR002058
Ensembl:ENSCAFT00000025061 ProteinModelPortal:F6X6U9 Uniprot:F6X6U9
Length = 818
Score = 147 (56.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 41/142 (28%), Positives = 71/142 (50%)
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIH 124
G+L ++EL+ L+G +LR G YR +Q V AR P++KF
Sbjct: 319 GNLGKALELAEALKGEKPEGAAMLELVGSILRGC-VPGVYR-VQTVPSARRPVVKFCHRP 376
Query: 125 QNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSL 184
+ D+S+ N S+FL S++D R R +V ++ WA+ ++ ++Y+L
Sbjct: 377 SGLHGDVSLSNRLALHNSRFLSLCSELDERVRPLVYTLRCWAQGRGLSGSGP-LLSNYAL 435
Query: 185 SLLVLFHFQTCVPAILPPLKDI 206
+LLV++ QT P +LP + +
Sbjct: 436 TLLVIYFLQTREPPVLPTVSQL 457
Score = 63 (27.2 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 14 ILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG-DLDISIE 72
++G+ + + R V++ ++EV +E G V PFGS + N F G DLD+ ++
Sbjct: 166 LVGLRELSEAERQLRSLVVALMQEVF--MEFFPGCVVHPFGSSI-NSFDVHGCDLDLFLD 222
Query: 73 LSN 75
L +
Sbjct: 223 LGD 225
>UNIPROTKB|E2R634 [details] [associations]
symbol:TUT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS50102 SMART:SM00355 SMART:SM00360
Pfam:PF03828 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 InterPro:IPR002058
GeneTree:ENSGT00550000074490 OMA:EQQGCAG EMBL:AAEX03011664
Ensembl:ENSCAFT00000025061 Uniprot:E2R634
Length = 873
Score = 147 (56.8 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 41/142 (28%), Positives = 71/142 (50%)
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIH 124
G+L ++EL+ L+G +LR G YR +Q V AR P++KF
Sbjct: 317 GNLGKALELAEALKGEKPEGAAMLELVGSILRGC-VPGVYR-VQTVPSARRPVVKFCHRP 374
Query: 125 QNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSL 184
+ D+S+ N S+FL S++D R R +V ++ WA+ ++ ++Y+L
Sbjct: 375 SGLHGDVSLSNRLALHNSRFLSLCSELDERVRPLVYTLRCWAQGRGLSGSGP-LLSNYAL 433
Query: 185 SLLVLFHFQTCVPAILPPLKDI 206
+LLV++ QT P +LP + +
Sbjct: 434 TLLVIYFLQTREPPVLPTVSQL 455
Score = 63 (27.2 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 14 ILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG-DLDISIE 72
++G+ + + R V++ ++EV +E G V PFGS + N F G DLD+ ++
Sbjct: 166 LVGLRELSEAERQLRSLVVALMQEVF--MEFFPGCVVHPFGSSI-NSFDVHGCDLDLFLD 222
Query: 73 LSN 75
L +
Sbjct: 223 LGD 225
>UNIPROTKB|E2RCU9 [details] [associations]
symbol:MTPAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0030145 "manganese ion binding" evidence=IEA]
[GO:0006378 "mRNA polyadenylation" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0002134 "UTP binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] Pfam:PF03828 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0000287 GO:GO:0006378 GO:GO:0030145 GO:GO:0071044
GO:GO:0004652 InterPro:IPR002058 GeneTree:ENSGT00550000074490
GO:GO:0002134 CTD:55149 OMA:VRCWARA EMBL:AAEX03001227
RefSeq:XP_535150.2 Ensembl:ENSCAFT00000006387 GeneID:477963
KEGG:cfa:477963 Uniprot:E2RCU9
Length = 584
Score = 148 (57.2 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 30/98 (30%), Positives = 55/98 (56%)
Query: 107 LQFVAHARVPILKFETIHQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWA 166
+Q + +AR P+++F CD++ +N S+ L+ +D R R MV ++ WA
Sbjct: 304 VQKILNARCPLVRFSHQASGFQCDLTTNNRIALKSSELLYIYGALDSRVRAMVFSIRCWA 363
Query: 167 KAHDINNPKTGTF-NSYSLSLLVLFHFQTCVPAILPPL 203
+AH + + G++ ++SL+++V+F Q P ILP L
Sbjct: 364 RAHSLTSSIPGSWITNFSLTMMVIFFLQRRSPPILPTL 401
Score = 57 (25.1 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 11 LKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG-DLDI 69
L +L ED + R S + ++ + TV PFGS V N F + G DLD+
Sbjct: 192 LNTLLKEFQLTEEDIKLRYLTCSLIEDIAAAY--FLDCTVRPFGSSV-NSFGKLGCDLDM 248
Query: 70 SIEL 73
++L
Sbjct: 249 FLDL 252
>UNIPROTKB|Q9NVV4 [details] [associations]
symbol:MTPAP "Poly(A) RNA polymerase, mitochondrial"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0071044 "histone mRNA
catabolic process" evidence=IMP] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0002134 "UTP binding" evidence=IDA] [GO:0005524
"ATP binding" evidence=IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IDA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Pfam:PF03828
GO:GO:0005739 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0000287 GO:GO:0008219 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 EMBL:CH471072 GO:GO:0030145
GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0002134 EMBL:AL161651 EMBL:AB194709 EMBL:AY364242
EMBL:AK001348 EMBL:AK022188 EMBL:AL122121 EMBL:AL353796
EMBL:BC061703 IPI:IPI00153051 IPI:IPI00470416 RefSeq:NP_060579.3
UniGene:Hs.173946 PDB:3PQ1 PDBsum:3PQ1 ProteinModelPortal:Q9NVV4
SMR:Q9NVV4 IntAct:Q9NVV4 STRING:Q9NVV4 PhosphoSite:Q9NVV4
DMDM:74753002 PaxDb:Q9NVV4 PRIDE:Q9NVV4 Ensembl:ENST00000263063
Ensembl:ENST00000358107 GeneID:55149 KEGG:hsa:55149 UCSC:uc001iva.4
UCSC:uc001ivb.4 CTD:55149 GeneCards:GC10M030598 HGNC:HGNC:25532
HPA:HPA038620 MIM:613669 MIM:613672 neXtProt:NX_Q9NVV4
PharmGKB:PA164723192 HOGENOM:HOG000115438 HOVERGEN:HBG082104
OMA:VRCWARA OrthoDB:EOG45TCN5 PhylomeDB:Q9NVV4
EvolutionaryTrace:Q9NVV4 GenomeRNAi:55149 NextBio:58876
ArrayExpress:Q9NVV4 Bgee:Q9NVV4 Genevestigator:Q9NVV4
GermOnline:ENSG00000107951 Uniprot:Q9NVV4
Length = 582
Score = 151 (58.2 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 36/121 (29%), Positives = 62/121 (51%)
Query: 88 QSLLGDLLRALRQKG-GYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKSKFLF 146
Q +L L L G G +Q + +AR P+++F CD++ +N S+ L+
Sbjct: 282 QKILSVLGECLDHFGPGCVGVQKILNARCPLVRFSHQASGFQCDLTTNNRIALTSSELLY 341
Query: 147 WISQIDGRFRDMVLLVKEWAKAHDINNPKTGTF-NSYSLSLLVLFHFQTCVPAILPPLKD 205
+D R R +V V+ WA+AH + + G + ++SL+++V+F Q P ILP L
Sbjct: 342 IYGALDSRVRALVFSVRCWARAHSLTSSIPGAWITNFSLTMMVIFFLQRRSPPILPTLDS 401
Query: 206 I 206
+
Sbjct: 402 L 402
Score = 52 (23.4 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 50 VEPFGSFVSNLFSRWG-DLDISIELSNGSCISS 81
V PFGS V N F + G DLD+ ++L +S+
Sbjct: 227 VRPFGSSV-NTFGKLGCDLDMFLDLDETRNLSA 258
>MGI|MGI:1914690 [details] [associations]
symbol:Mtpap "mitochondrial poly(A) polymerase"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000287 "magnesium ion binding" evidence=ISO]
[GO:0002134 "UTP binding" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0030145 "manganese ion
binding" evidence=ISO] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=ISO]
MGI:MGI:1914690 Pfam:PF03828 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0000287
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0030145
GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GeneTree:ENSGT00550000074490 GO:GO:0002134 CTD:55149
HOGENOM:HOG000115438 HOVERGEN:HBG082104 OMA:VRCWARA
OrthoDB:EOG45TCN5 EMBL:AK011546 EMBL:AK076565 EMBL:AK135537
EMBL:BC057643 IPI:IPI00459344 RefSeq:NP_080433.1 UniGene:Mm.49826
ProteinModelPortal:Q9D0D3 SMR:Q9D0D3 PhosphoSite:Q9D0D3
PaxDb:Q9D0D3 PRIDE:Q9D0D3 Ensembl:ENSMUST00000025077 GeneID:67440
KEGG:mmu:67440 UCSC:uc008dyi.1 InParanoid:Q9D0D3 NextBio:324570
Bgee:Q9D0D3 CleanEx:MM_PAPD1 Genevestigator:Q9D0D3
GermOnline:ENSMUSG00000024234 Uniprot:Q9D0D3
Length = 585
Score = 148 (57.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 38/143 (26%), Positives = 72/143 (50%)
Query: 65 GDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIH 124
G+ + ++ N A +K+ S++G+ L G +Q + +AR P+++F
Sbjct: 266 GNFFMEFQVKNVPSERIATQKIL-SVIGECLDNFGP--GCVGVQKILNARCPLVRFSHQG 322
Query: 125 QNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTF-NSYS 183
CD++ +N S+ L+ +D R R +V V+ WA+AH + + G + ++S
Sbjct: 323 SGFQCDLTANNSIALKSSELLYIYGSLDSRVRALVFSVRCWARAHSLTSSIPGAWITNFS 382
Query: 184 LSLLVLFHFQTCVPAILPPLKDI 206
L+++V+F Q P ILP L +
Sbjct: 383 LTVMVIFFLQRRSPPILPTLDSL 405
Score = 50 (22.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 50 VEPFGSFVSNLFSRWG-DLDISIEL 73
+ PFGS V N F + G DLD+ ++L
Sbjct: 230 IRPFGSSV-NTFGKLGCDLDMFLDL 253
>POMBASE|SPAC821.04c [details] [associations]
symbol:cid13 "poly(A) polymerase Cid13" species:4896
"Schizosaccharomyces pombe" [GO:0003730 "mRNA 3'-UTR binding"
evidence=IC] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IDA] [GO:0033314 "mitotic DNA replication
checkpoint" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 PomBase:SPAC821.04c
Pfam:PF03828 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006378
GO:GO:0003730 GO:GO:0033314 eggNOG:COG5260 OrthoDB:EOG46QB1M
GO:GO:0004652 InterPro:IPR002058 PIR:T41715 RefSeq:NP_593157.1
ProteinModelPortal:Q9UT49 IntAct:Q9UT49 STRING:Q9UT49 PRIDE:Q9UT49
EnsemblFungi:SPAC821.04c.1 GeneID:2543204 KEGG:spo:SPAC821.04c
OMA:DICIIAP NextBio:20804227 Uniprot:Q9UT49
Length = 578
Score = 155 (59.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 44/180 (24%), Positives = 83/180 (46%)
Query: 26 ETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSAGKK 85
E R + L ++++ + FGS S L S D+D+ I C + +
Sbjct: 70 ERRYAFVQKLEQILKKEFPYKNIKTSLFGSTQSLLASNASDIDLCIITDPPQCAPTTCE- 128
Query: 86 VKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKSKFL 145
+ A + G +++ ++ A+VPI+K +SCD +I+ + ++ +
Sbjct: 129 ---------VSAAFARNGLKKVVCISTAKVPIVKVWDSELQLSCDCNINKTISTLNTRLM 179
Query: 146 FWISQIDGRFRDMVLLVKEWAKAHDINNP-KTGTFNSYSLSLLVLFHFQTCVPAILPPLK 204
D R R +++++K WAK +N+ + GT SY++S +V+ Q P ILP L+
Sbjct: 180 RSYVLCDPRVRPLIVMIKYWAKRRCLNDAAEGGTLTSYTISCMVINFLQKRDPPILPSLQ 239
>UNIPROTKB|F1MSM5 [details] [associations]
symbol:MTPAP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0002134 "UTP binding" evidence=IEA] [GO:0000287 "magnesium ion
binding" evidence=IEA] Pfam:PF03828 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0000287
GO:GO:0006378 GO:GO:0030145 GO:GO:0071044 GO:GO:0004652
InterPro:IPR002058 GeneTree:ENSGT00550000074490 GO:GO:0002134
CTD:55149 OMA:VRCWARA EMBL:DAAA02035653 EMBL:DAAA02035652
IPI:IPI00717138 RefSeq:XP_002692192.2 RefSeq:XP_588743.5
UniGene:Bt.64250 PRIDE:F1MSM5 Ensembl:ENSBTAT00000005760
GeneID:511412 KEGG:bta:511412 Uniprot:F1MSM5
Length = 583
Score = 155 (59.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 43/156 (27%), Positives = 79/156 (50%)
Query: 50 VEPFGSFVSNLFSRWGDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKG-GYRRLQ 108
++ G F + S G+ + ++ N A +K+ S++G+ L Q G G +Q
Sbjct: 252 LDEIGKFTAQKTS--GNFLMEFQVKNVPSERVATQKIL-SVIGE---CLDQFGPGCVGVQ 305
Query: 109 FVAHARVPILKFETIHQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKA 168
+ +AR P+++F CD++ +N S+ L+ +D R R +V V+ WA+A
Sbjct: 306 RILNARCPLVRFSHQASGFQCDLTTNNRIALKSSELLYMYGALDSRVRALVFSVRCWARA 365
Query: 169 HDINNPKTGTF-NSYSLSLLVLFHFQTCVPAILPPL 203
H + + G + ++SL+++V+F Q P ILP L
Sbjct: 366 HSLTSSIPGAWITNFSLTMMVIFFLQRRSPPILPTL 401
>DICTYBASE|DDB_G0271962 [details] [associations]
symbol:DDB_G0271962 species:44689 "Dictyostelium
discoideum" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909
dictyBase:DDB_G0271962 Pfam:PF03828 EMBL:AAFI02000007
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0016779 RefSeq:XP_645343.1
ProteinModelPortal:Q8T2J7 EnsemblProtists:DDB0168581 GeneID:8618231
KEGG:ddi:DDB_G0271962 InParanoid:Q8T2J7 OMA:SYSITNM Uniprot:Q8T2J7
Length = 466
Score = 153 (58.9 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 64/238 (26%), Positives = 107/238 (44%)
Query: 3 SYNVLEPILKDILGMLNPLRED---WETRMKVISDLREVVESVESLR--GAT-VEPFGSF 56
+Y + IL+ + +N L E + R ++ L EV++ SL G VE FGS
Sbjct: 137 NYKLNGEILRKLSVDINKLSERVRCYRDRTIILKRLEEVIKRETSLNKFGEIKVEIFGSS 196
Query: 57 VSNLFSRWGDLDISIELSNGSCISSAGKKVKQSL-LGDLLRALRQKGGYRRLQFVAHARV 115
+ L + D+DI + ++ K +LRA G+ ++ + HA+V
Sbjct: 197 STQLALKKSDVDIVMSFETE--LTKRNDITKWCYQFSSILRA----NGFYNIKPIIHAKV 250
Query: 116 PILKFETIHQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPK 175
PI+KF CDI++ G F Q+ +++ K WA +IN+
Sbjct: 251 PIVKFFDPKTEFHCDITLTKDSGNTGVVKEF--CQLLPILPVLIIFCKNWASVLNINDAS 308
Query: 176 TGTFNSYSLSLLVLFHFQTCVPAILPPLKDIYP-GNLVDDLKGVRANAERQIAEICAF 232
GT +SYS++ +V+F Q +LP KDI N +++ V N R IA++ +
Sbjct: 309 QGTLSSYSITNMVIFVLQK--KGLLPSYKDIQSFKNSSKEVQYVVDN--RDIADLLVY 362
>RGD|1310900 [details] [associations]
symbol:Mtpap "mitochondrial poly(A) polymerase" species:10116
"Rattus norvegicus" [GO:0000287 "magnesium ion binding"
evidence=IEA;ISO] [GO:0002134 "UTP binding" evidence=IEA;ISO]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005794 "Golgi apparatus" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0006378 "mRNA polyadenylation"
evidence=IEA;ISO] [GO:0030145 "manganese ion binding"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
Pfam:PF03828 RGD:1310900 GO:GO:0005739 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0000287 GO:GO:0006378
GO:GO:0030145 GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GeneTree:ENSGT00550000074490 GO:GO:0002134 OMA:VRCWARA
OrthoDB:EOG45TCN5 IPI:IPI00366610 Ensembl:ENSRNOT00000022462
UCSC:RGD:1310900 Uniprot:D3ZPN5
Length = 584
Score = 146 (56.5 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 35/121 (28%), Positives = 62/121 (51%)
Query: 88 QSLLGDLLRALRQKG-GYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKSKFLF 146
Q +L + L G G +Q + +AR P+++F CD++ +N S+ L+
Sbjct: 285 QKILSVIGECLDNFGPGCVGVQKILNARCPLVRFSHQGSGFQCDLTANNSIALKSSELLY 344
Query: 147 WISQIDGRFRDMVLLVKEWAKAHDINNPKTGTF-NSYSLSLLVLFHFQTCVPAILPPLKD 205
+D R R +V V+ WA+AH + + G + ++SL+++V+F Q P ILP L
Sbjct: 345 IYGSLDSRVRALVFGVRCWARAHSLTSSIPGAWITNFSLTMMVIFFLQRRSPPILPTLDS 404
Query: 206 I 206
+
Sbjct: 405 L 405
Score = 49 (22.3 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 50 VEPFGSFVSNLFSRWG-DLDISIELSNGSCIS 80
V PFGS V N F + G DLD+ ++L +S
Sbjct: 230 VWPFGSSV-NTFGKLGCDLDMFLDLDETGNLS 260
>UNIPROTKB|G4NER0 [details] [associations]
symbol:MGG_00073 "DNA polymerase sigma" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 EMBL:CM001235
InterPro:IPR002058 KO:K03514 GO:GO:0016779 RefSeq:XP_003719067.1
ProteinModelPortal:G4NER0 EnsemblFungi:MGG_00073T0 GeneID:2675081
KEGG:mgr:MGG_00073 Uniprot:G4NER0
Length = 703
Score = 152 (58.6 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 51/192 (26%), Positives = 94/192 (48%)
Query: 12 KDILGMLNPLR-EDWETRMK--VISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLD 68
K+I+ N + D+E +++ +I +L +++ + + R ATV PFGSF SNL+ GD+D
Sbjct: 376 KEIVDFYNYAKPRDFEEKLRQGLIDELAKLIRNSQ-FRDATVYPFGSFKSNLYLPTGDMD 434
Query: 69 ISIELSNGSCISSAGKKVKQSLL---GDLLRALRQKGGYRRLQFVAHARVPILKFETIHQ 125
+ + S+ A + ++ + G + +Q ++ ++ ARVP++K+
Sbjct: 435 L-VFCSDSYMSGRAARYSSKNHVFKFGAFIER-KQLAVDNHVEKISKARVPLVKYVDSRT 492
Query: 126 NISCDISIDNLCG-QIKSKFLFWISQIDGRFRDMVLLV---KEWAKAHDINNPKTGTFNS 181
+ D+S +N+ G + FL W Q F DM +LV K + +N P G
Sbjct: 493 GLKVDVSFENITGIRAIETFLAWREQ----FPDMPVLVTCIKHFLAMRGLNEPANGGIGG 548
Query: 182 YSLSLLVLFHFQ 193
++ LV+ Q
Sbjct: 549 TTVICLVVSMLQ 560
>TAIR|locus:2164047 [details] [associations]
symbol:AT5G53770 "AT5G53770" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] [GO:0009688 "abscisic acid
biosynthetic process" evidence=RCA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 EMBL:CP002688 eggNOG:COG5260 InterPro:IPR002058
KO:K03514 GO:GO:0016779 EMBL:BT002764 IPI:IPI00522291
RefSeq:NP_568798.1 UniGene:At.6981 ProteinModelPortal:Q84WU1
SMR:Q84WU1 PaxDb:Q84WU1 PRIDE:Q84WU1 EnsemblPlants:AT5G53770.1
GeneID:835458 KEGG:ath:AT5G53770 TAIR:At5g53770 InParanoid:Q84WU1
OMA:FFDFYGR PhylomeDB:Q84WU1 ProtClustDB:CLSN2690011
ArrayExpress:Q84WU1 Genevestigator:Q84WU1 Uniprot:Q84WU1
Length = 530
Score = 150 (57.9 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 50/180 (27%), Positives = 88/180 (48%)
Query: 13 DILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIE 72
D L P + + R + + V++ + VE FGS+ + L+ D+D+ I
Sbjct: 127 DFCDFLLPTQAEKAERDAAVESVSSVIKYIWP--SCKVEVFGSYKTGLYLPTSDIDVVI- 183
Query: 73 LSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDIS 132
L +G G + L RAL Q+G + L +A ARVPI+KF NI+ D+S
Sbjct: 184 LESGLTNPQLGLRA-------LSRALSQRGIAKNLLVIAKARVPIIKFVEKKSNIAFDLS 236
Query: 133 IDNLCGQIKSKFLF-WISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSL-SLLVLF 190
D G ++F+ +S++ R + L++K + + ++N +G SY+L ++L+ F
Sbjct: 237 FDMENGPKAAEFIQDAVSKLPP-LRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAF 295
>UNIPROTKB|F1NYJ2 [details] [associations]
symbol:LOC100857368 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
InterPro:IPR002058 GeneTree:ENSGT00550000074490 EMBL:AADN02064833
EMBL:AADN02064834 IPI:IPI00572679 Ensembl:ENSGALT00000020583
ArrayExpress:F1NYJ2 Uniprot:F1NYJ2
Length = 1330
Score = 152 (58.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 45/175 (25%), Positives = 82/175 (46%)
Query: 35 LREVVESVESLR--GATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSAGKKVKQSLLG 92
+R+ +E+ L G + FGS + + DLDI + + S LG
Sbjct: 988 IRQNLENFIRLEFPGTKLNLFGSSKNGFGFKQSDLDICMTMDGLETAEILPCYKTASELG 1047
Query: 93 DLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKSKFLFWISQID 152
+ + + R + + A+VPI+KF + + DIS+ N ++ L + ID
Sbjct: 1048 RFINLMSKS--LRNVLPITTAKVPIVKFFHVRSGLEVDISLYNTLALHNTRLLSSYAAID 1105
Query: 153 GRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAILPPLKDIY 207
R + + +K + K DI + G+ +SY+ +L+VL+ Q P ++P L++IY
Sbjct: 1106 PRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIY 1160
>UNIPROTKB|F1NJM6 [details] [associations]
symbol:LOC100857368 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0031123 OMA:KYFALPH
EMBL:AADN02064833 EMBL:AADN02064834 IPI:IPI00681958
Ensembl:ENSGALT00000033908 ArrayExpress:F1NJM6 Uniprot:F1NJM6
Length = 1477
Score = 152 (58.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 45/175 (25%), Positives = 82/175 (46%)
Query: 35 LREVVESVESLR--GATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSAGKKVKQSLLG 92
+R+ +E+ L G + FGS + + DLDI + + S LG
Sbjct: 1007 IRQNLENFIRLEFPGTKLNLFGSSKNGFGFKQSDLDICMTMDGLETAEILPCYKTASELG 1066
Query: 93 DLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKSKFLFWISQID 152
+ + + R + + A+VPI+KF + + DIS+ N ++ L + ID
Sbjct: 1067 RFINLMSKS--LRNVLPITTAKVPIVKFFHVRSGLEVDISLYNTLALHNTRLLSSYAAID 1124
Query: 153 GRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAILPPLKDIY 207
R + + +K + K DI + G+ +SY+ +L+VL+ Q P ++P L++IY
Sbjct: 1125 PRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIY 1179
>WB|WBGene00018390 [details] [associations]
symbol:F43E2.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
GO:GO:0009792 GO:GO:0000003 EMBL:FO080417 RefSeq:NP_495546.2
ProteinModelPortal:O02094 EnsemblMetazoa:F43E2.1.1
EnsemblMetazoa:F43E2.1.2 GeneID:185708 KEGG:cel:CELE_F43E2.1
UCSC:F43E2.1 CTD:185708 WormBase:F43E2.1 eggNOG:NOG280867
InParanoid:O02094 OMA:IHVLQWY NextBio:929224 Uniprot:O02094
Length = 467
Score = 134 (52.2 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 51/194 (26%), Positives = 96/194 (49%)
Query: 45 LRGATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSAGKK------VKQSLLGDLLRAL 98
LRG +V FGSF ++ S+ DLD+ + C ++ G K + Q++ D++ +
Sbjct: 78 LRGLSV--FGSFPTHCASKDSDLDLCV------CATATGNKKQLPVIILQAIFRDMMYSK 129
Query: 99 RQKGGYRR-----LQFVAHARVPILKFETIHQNISCDISI---DNLCGQIKSKFLFWISQ 150
+ + + FV A+VPI++F+ ++ D+S DN + +K++ Q
Sbjct: 130 EGQNIFGENVVSGISFVQTAKVPIIRFKI--NDVPVDLSATFDDNPRTSLAAKYINAYCQ 187
Query: 151 IDGRFRDMVLLVKEWAKAHDINNPKTGTF-NSYSLSLLVLFHFQ--TCVPAILPPLKDIY 207
+D RF+ +V+ +K+W K+ + NSYS+ LL++ Q +P + D++
Sbjct: 188 LDDRFKILVMFLKKWMKSEGRAEDHLRIYPNSYSIILLLIHVLQWYDILPNLHQTHSDLF 247
Query: 208 P-GNL-VDDLKGVR 219
GN + DL +R
Sbjct: 248 HRGNFKLSDLAELR 261
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 53/213 (24%), Positives = 95/213 (44%)
Query: 46 RGATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYR 105
+ ++++ +GSF++ L DLD++ +++ + + V + L L + +K
Sbjct: 376 KDSSIQLYGSFLTGLSLEGSDLDVNFKINQNENQVTHLEVVSKYLESTKLYTIIEK---- 431
Query: 106 RLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEW 165
RL A VPI++F D+S ++ S L ID R+ + LLVK W
Sbjct: 432 RLS----ATVPIIRFVEKSSKYHFDMSCNSSKAYFNSLLLKEYCSIDNRYIILSLLVKWW 487
Query: 166 AKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAILPPLKDIYPGNLVDDLKGVRANAERQ 225
A ++N+ TF+S+ L +V+ Q+ ILP L+ P L++
Sbjct: 488 ASCKNLNDASKHTFSSFCLVNMVIHFLQSISTPILPNLQTKSP-QLLNSYSTNPILKRID 546
Query: 226 IAEICAF-NIARFSSDKYRKINRSSLAHLFVSF 257
E F + +F S K K+ L +LF ++
Sbjct: 547 SFEFYEFKSFDKFDSSK-NKLKIDQLFYLFFNY 578
>ASPGD|ASPL0000029878 [details] [associations]
symbol:cutB species:162425 "Emericella nidulans"
[GO:0031125 "rRNA 3'-end processing" evidence=IEA] [GO:0007000
"nucleolus organization" evidence=IEA] [GO:0016075 "rRNA catabolic
process" evidence=IEA] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP] [GO:0006402 "mRNA catabolic process" evidence=IMP]
[GO:0031087 "deadenylation-independent decapping of
nuclear-transcribed mRNA" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 GO:GO:0016853
EMBL:AACD01000098 EMBL:BN001305 eggNOG:COG5260 InterPro:IPR002058
KO:K03514 GO:GO:0016779 RefSeq:XP_663298.1
ProteinModelPortal:Q5B186 STRING:Q5B186
EnsemblFungi:CADANIAT00003371 GeneID:2871984 KEGG:ani:AN5694.2
HOGENOM:HOG000180073 OMA:KWSNPDP OrthoDB:EOG447K2J Uniprot:Q5B186
Length = 694
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 55/216 (25%), Positives = 95/216 (43%)
Query: 18 LNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIELSNG- 76
+ P+R + R +++ L+ +S G + FGSF S L+ D+D+ + LS
Sbjct: 266 VKPVRYEHIVRQDLVARLQAAFQS--RYYGVEIHAFGSFASGLYLPNADIDLVL-LSTSF 322
Query: 77 --SCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISID 134
+ + + G++ Q + ++ +AHARVPILKF + D+S D
Sbjct: 323 RRTGVKTFGERKGQIYAFSAFLKNQNIAVPGSVETIAHARVPILKFVDKLTGLKVDLSFD 382
Query: 135 NLCGQIKSK-FLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLV---LF 190
N G I ++ F W S+ +V ++K++ +N T +S++ LV L
Sbjct: 383 NDSGLIANRTFQQWKSEYPA-MPVIVSVIKQFLLLRGLNEVPTLGLGGFSITCLVTSLLQ 441
Query: 191 HFQ--TCVPAILPPLKDIYP--GNLVD-DLKGVRAN 221
H P + L D + GN D + G+R N
Sbjct: 442 HMPHGNLYPNLGSVLMDFFQFYGNNFDYETVGIRMN 477
>TAIR|locus:2078426 [details] [associations]
symbol:AT3G56320 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA;ISS]
InterPro:IPR002934 Pfam:PF01909 EMBL:CP002686 GO:GO:0016779
HOGENOM:HOG000084944 ProtClustDB:CLSN2680151 EMBL:BT008327
EMBL:AK228086 IPI:IPI00522650 RefSeq:NP_191191.2 UniGene:At.23883
UniGene:At.71191 ProteinModelPortal:Q7Y227 IntAct:Q7Y227
PaxDb:Q7Y227 PRIDE:Q7Y227 EnsemblPlants:AT3G56320.1 GeneID:824799
KEGG:ath:AT3G56320 TAIR:At3g56320 eggNOG:NOG311156
InParanoid:Q7Y227 OMA:ERESEFH PhylomeDB:Q7Y227
Genevestigator:Q7Y227 Uniprot:Q7Y227
Length = 603
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 54/210 (25%), Positives = 94/210 (44%)
Query: 3 SYNVLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFS 62
S+ + E +IL + P +R ++I +R ++ S E G V FGS +
Sbjct: 39 SWMIAEERAHEILCTIQPALVSDRSRNEIIDYVRTLIMSHE---GIEVFSFGSVPLKTYL 95
Query: 63 RWGDLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRR-LQFVAHARVPILKFE 121
GD+D+++ G+ L L R+ + +QF+ A+V ++K
Sbjct: 96 PDGDIDLTVLTKQNMDDDFYGQ-----LCSRLQNEERESEFHATDVQFIP-AQVKVIKCN 149
Query: 122 TIHQNISCDISIDNLCGQIKSKFLFWISQIDGR---FRDMVLLVKEWAKAHD-INNPKTG 177
+NI+ DIS + G FL + Q+ GR F+ ++LVK W I TG
Sbjct: 150 I--RNIAVDISFNQTAGLCALCFLEQVDQLFGRDHLFKRSIILVKAWCYYESRILGANTG 207
Query: 178 TFNSYSLSLLVLFHFQTCVPAILPPLKDIY 207
++Y+L++LVL+ ++ PL +Y
Sbjct: 208 LISTYALAVLVLYIINLFHSSLSGPLAVLY 237
>WB|WBGene00014115 [details] [associations]
symbol:gld-4 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0043186 "P granule" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IDA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 GO:GO:0005524 GO:GO:0009792 GO:GO:0007126
GO:GO:0040010 GO:GO:0048471 GO:GO:0046872 GO:GO:0006378
GO:GO:0040035 GO:GO:0007281 GO:GO:0043186 GO:GO:0004652
InterPro:IPR002058 KO:K03514 EMBL:Z79759 EMBL:FJ610054
RefSeq:NP_492446.3 UniGene:Cel.16131 ProteinModelPortal:G5EFL0
SMR:G5EFL0 EnsemblMetazoa:ZK858.1 GeneID:172735
KEGG:cel:CELE_ZK858.1 CTD:172735 WormBase:ZK858.1
GeneTree:ENSGT00400000022055 OMA:KISMFGS NextBio:876795
Uniprot:G5EFL0
Length = 845
Score = 129 (50.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 44/181 (24%), Positives = 78/181 (43%)
Query: 13 DILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIE 72
D+ + P + R KV +R+ V + + FGS +NLF D+D+ +E
Sbjct: 86 DMYHWIKPNEIESRLRTKVFEKVRDSVLRRWKQKTIKISMFGSLRTNLFLPTSDIDVLVE 145
Query: 73 LSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDIS 132
+ + + G L + R L + A VPI+K +S DIS
Sbjct: 146 CDDW--VGTPG-----DWLAETARGLEADNIAESVMVYGGAFVPIVKMVDRDTRLSIDIS 198
Query: 133 IDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHF 192
+ + G + ++ + + +VLL+K++ ++N TG +SY L LL++ F
Sbjct: 199 FNTVQGVRAASYIAKVKEEFPLIEPLVLLLKQFLHYRNLNQTFTGGLSSYGLVLLLVNFF 258
Query: 193 Q 193
Q
Sbjct: 259 Q 259
>FB|FBgn0035889 [details] [associations]
symbol:mkg-p "monkey king protein" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] InterPro:IPR002934
InterPro:IPR015880 Pfam:PF01909 SMART:SM00355 GO:GO:0008270
GO:GO:0005622 eggNOG:COG5260 GO:GO:0016779 EMBL:AY562976
ProteinModelPortal:Q6Q376 SMR:Q6Q376 PRIDE:Q6Q376
FlyBase:FBgn0035889 InParanoid:Q6Q376 OrthoDB:EOG4WH71R
ArrayExpress:Q6Q376 Bgee:Q6Q376 Uniprot:Q6Q376
Length = 659
Score = 126 (49.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 48/190 (25%), Positives = 85/190 (44%)
Query: 17 MLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIELSNG 76
+LN D E +R +E E V PFGS V+ L + D+D+ +E NG
Sbjct: 90 VLNFFACDLENMKTCFGHVRNCIEK-EMWGRVRVFPFGSLVTGLALKESDIDLFLE-PNG 147
Query: 77 SCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNL 136
+ L LR+ + + + HA VPI++ + ++ DI++ N
Sbjct: 148 N----QPPLFHNQLYNKTSHFLRRSKCFADVFTIRHASVPIIRCKHQLTGLNIDINMSNP 203
Query: 137 CGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCV 196
S+F+ + + R R++ L +K WAK + + G SY L L++ + Q V
Sbjct: 204 NSIYNSRFVGELMFRNERIRELCLFLKIWAKKLKLISH--GGMTSYCLISLIIVNLQ--V 259
Query: 197 PAILPPLKDI 206
++P +K++
Sbjct: 260 NRLVPSVKEL 269
>UNIPROTKB|E9PKX1 [details] [associations]
symbol:ZCCHC11 "Terminal uridylyltransferase 4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001878 InterPro:IPR002934 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0008270 GO:GO:0003676 EMBL:AL513218
InterPro:IPR002058 GO:GO:0016779 EMBL:AL138849 HGNC:HGNC:28981
ChiTaRS:ZCCHC11 EMBL:AL591167 IPI:IPI00976712
ProteinModelPortal:E9PKX1 SMR:E9PKX1 Ensembl:ENST00000484723
ArrayExpress:E9PKX1 Bgee:E9PKX1 Uniprot:E9PKX1
Length = 906
Score = 127 (49.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 43/165 (26%), Positives = 78/165 (47%)
Query: 6 VLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG 65
+L+ + K L+P + R +++ L + ++ E A + FGS + R
Sbjct: 709 ILDLVCKRCFDELSPPCSEQHNREQILIGLEKFIQK-EYDEKARLCLFGSSKNGFGFRDS 767
Query: 66 DLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQ 125
DLDI + L +A K + ++ +L + L++ G R + + A+VPI+KFE
Sbjct: 768 DLDICMTLEGHE---NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRS 824
Query: 126 NISCDISIDNLCGQIKSKFLFWISQIDGRFRDMVLLVKEWAKAHD 170
+ DIS+ N Q ++ L + ID R + + +K +AK D
Sbjct: 825 GLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKIFD 869
Score = 126 (49.4 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 42/181 (23%), Positives = 83/181 (45%)
Query: 23 EDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWGDLDISIELSNGSCISSA 82
+D R +++ ++ +V+ + L ++ +GS ++ + D++I I+
Sbjct: 130 DDLRVRQEIVEEMSKVITTF--LPECSLRLYGSSLTRFALKSSDVNIDIKFPP------- 180
Query: 83 GKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQNISCDISIDNLCGQIKS 142
K LL +L L++ Y ++ HA+VP++ + C +S N + +
Sbjct: 181 -KMNHPDLLIKVLGILKKNVLYVDVESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTT 239
Query: 143 KFLFWISQIDGRFRDMVLLVKEWAKAHDINNPKTGTFNSYSLSLLVLFHFQTCVPAILPP 202
L + +I+ F +VL + WAK I++ G SY +L+V+F Q P +LP
Sbjct: 240 DLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPC 299
Query: 203 L 203
L
Sbjct: 300 L 300
>TAIR|locus:2061868 [details] [associations]
symbol:AT2G40520 "AT2G40520" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA;ISS]
InterPro:IPR002934 Pfam:PF01909 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016779 EMBL:AY924760
IPI:IPI00525074 RefSeq:NP_001078031.1 RefSeq:NP_001118485.1
RefSeq:NP_001118486.1 RefSeq:NP_850331.1 UniGene:At.37036
UniGene:At.68912 ProteinModelPortal:Q5BPR8 PRIDE:Q5BPR8
EnsemblPlants:AT2G40520.1 EnsemblPlants:AT2G40520.2
EnsemblPlants:AT2G40520.3 EnsemblPlants:AT2G40520.4 GeneID:818647
KEGG:ath:AT2G40520 TAIR:At2g40520 HOGENOM:HOG000084944
InParanoid:Q5BPR8 OMA:EKFFREC PhylomeDB:Q5BPR8
ProtClustDB:CLSN2680151 Genevestigator:Q5BPR8 Uniprot:Q5BPR8
Length = 502
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 53/206 (25%), Positives = 99/206 (48%)
Query: 6 VLEPILKDILGMLNPLREDWETRMKVISDLREVVESVESLRGATVEPFGSFVSNLFSRWG 65
+ E ++IL + P +R K+IS+L+ ++ E L G V FGS + G
Sbjct: 35 IAEARAQEILCAIQPNYLAERSRNKIISNLQTLLW--ERL-GIEVYLFGSMPLKTYLPDG 91
Query: 66 DLDISIELSNGSCISSAGKKVKQSLLGDLLRALRQKGGYRRLQFVAHARVPILKFETIHQ 125
D+D+++ L++ + + V L ++ + Q G +Q+V A+V ++K +
Sbjct: 92 DIDLTV-LTHHASEEDCARAVCCVLEAEMGNSDLQVTG---VQYV-QAKVKVIKCSI--R 144
Query: 126 NISCDISIDNLCGQIKSKFLFWISQIDGR---FRDMVLLVKEWAKAHD-INNPKTGTFNS 181
+++ DIS + L G FL + + GR F+ ++LVK W I +G ++
Sbjct: 145 DVAFDISFNQLAGLGALCFLEQVDKAFGRDHLFKKSIILVKAWCFYESRILGANSGLIST 204
Query: 182 YSLSLLVLFHFQTCVPAILPPLKDIY 207
Y+L++LVL ++ PL +Y
Sbjct: 205 YALAILVLNIVNMSYSSLSGPLAVLY 230
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.140 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 293 293 0.00091 115 3 11 22 0.45 33
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 82
No. of states in DFA: 613 (65 KB)
Total size of DFA: 209 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.89u 0.12s 24.01t Elapsed: 00:00:01
Total cpu time: 23.90u 0.12s 24.02t Elapsed: 00:00:01
Start: Mon May 20 16:14:30 2013 End: Mon May 20 16:14:31 2013