BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>022737
MAAAAVFSYRIFCPIRCSAASNNHDPNKQKLNNISYSGNSTRSTKVDLHSQTTGVASTFV
ASVAAEKEGCRINEVQIRQNIPTKKQFVDPYRHGLIIEGGVGYRQTVVVRSYEVGPDKTA
TLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVE
IDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRAEISPWF
IDKQAIIEDVPEKISKLDDTAKYVNSDLKVNKHQTKRLICLQLLCSSFIYLFI

High Scoring Gene Products

Symbol, full name Information P value
FATB
AT1G08510
protein from Arabidopsis thaliana 9.9e-55
AT4G13050 protein from Arabidopsis thaliana 9.9e-39
FaTA
AT3G25110
protein from Arabidopsis thaliana 1.3e-38
CHY_0816
Acyl carrier protein thioesterase, homolog
protein from Carboxydothermus hydrogenoformans Z-2901 1.3e-05
CHY_0816
acyl carrier protein thioesterase, homolog
protein from Carboxydothermus hydrogenoformans Z-2901 1.3e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022737
        (293 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2201786 - symbol:FATB "AT1G08510" species:3702...   565  9.9e-55   1
TAIR|locus:2123256 - symbol:AT4G13050 "AT4G13050" species...   414  9.9e-39   1
TAIR|locus:2090285 - symbol:FaTA "AT3G25110" species:3702...   413  1.3e-38   1
UNIPROTKB|Q3ADW4 - symbol:CHY_0816 "Acyl carrier protein ...   125  1.3e-05   1
TIGR_CMR|CHY_0816 - symbol:CHY_0816 "acyl carrier protein...   125  1.3e-05   1


>TAIR|locus:2201786 [details] [associations]
            symbol:FATB "AT1G08510" species:3702 "Arabidopsis
            thaliana" [GO:0000036 "ACP phosphopantetheine attachment site
            binding involved in fatty acid biosynthetic process"
            evidence=ISS;IDA] [GO:0006633 "fatty acid biosynthetic process"
            evidence=ISS;IMP] [GO:0008152 "metabolic process" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016790 "thiolester
            hydrolase activity" evidence=IEA] [GO:0016297
            "acyl-[acyl-carrier-protein] hydrolase activity" evidence=IDA]
            [GO:0009536 "plastid" evidence=TAS] InterPro:IPR002864
            InterPro:IPR021113 Pfam:PF01643 Pfam:PF12590 EMBL:CP002684
            GO:GO:0009507 GO:GO:0009536 GO:GO:0000036 EMBL:AC006932
            UniGene:At.19907 GO:GO:0016297 EMBL:Z36910 EMBL:Z36911
            EMBL:AY054679 EMBL:AY059827 EMBL:AY064652 EMBL:BT008505
            IPI:IPI00516603 PIR:S69195 RefSeq:NP_172327.1 UniGene:At.46797
            ProteinModelPortal:Q9SJE2 STRING:Q9SJE2 PRIDE:Q9SJE2
            EnsemblPlants:AT1G08510.1 GeneID:837372 KEGG:ath:AT1G08510
            TAIR:At1g08510 InParanoid:Q9SJE2 KO:K10781 OMA:ECQHLLR
            PhylomeDB:Q9SJE2 ProtClustDB:PLN02370
            BioCyc:MetaCyc:AT1G08510-MONOMER Genevestigator:Q9SJE2
            Uniprot:Q9SJE2
        Length = 412

 Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
 Identities = 111/219 (50%), Positives = 152/219 (69%)

Query:    63 VAAEKEGCRINEVQIRQNIPTKKQFVDPYRHGLIIEGGVGYRQTVVVRSYEVGPDKTATL 122
             +AAEK+   ++    R ++      VDP+  G I++ G+ +RQ   +RSYE+G D++A++
Sbjct:   104 LAAEKQWMMLDWKPRRSDM-----LVDPFGIGRIVQDGLVFRQNFSIRSYEIGADRSASI 158

Query:   123 ESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEID 182
             E+++N  QETALNHV  +GLL +GFG+T  M + NLIWVV+RMQV +D YP WG+VVE+D
Sbjct:   159 ETVMNHLQETALNHVKTAGLLGDGFGSTPEMFKKNLIWVVTRMQVVVDKYPTWGDVVEVD 218

Query:   183 TWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRAEISPWFID 242
             TWV  SGKNGMRRDWL+R   TG    RA+S WVMMN+ TRRLSKIP EVR EI P+F++
Sbjct:   219 TWVSQSGKNGMRRDWLVRDCNTGETLTRASSVWVMMNKLTRRLSKIPEEVRGEIEPYFVN 278

Query:   243 KQAIIEDVPEKISKLDD-TAKYVNS-------DLKVNKH 273
                ++ +   K++K+DD TA YV S       DL VN+H
Sbjct:   279 SDPVLAEDSRKLTKIDDKTADYVRSGLTPRWSDLDVNQH 317


>TAIR|locus:2123256 [details] [associations]
            symbol:AT4G13050 "AT4G13050" species:3702 "Arabidopsis
            thaliana" [GO:0000036 "ACP phosphopantetheine attachment site
            binding involved in fatty acid biosynthetic process" evidence=ISS]
            [GO:0006633 "fatty acid biosynthetic process" evidence=IGI;ISS]
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016790 "thiolester
            hydrolase activity" evidence=IEA] InterPro:IPR002864 Pfam:PF01643
            GO:GO:0009507 EMBL:CP002687 GO:GO:0006633 EMBL:AL161535
            EMBL:AL079349 GO:GO:0016295 GO:GO:0004320 GO:GO:0016296
            HOGENOM:HOG000237896 KO:K10782 ProtClustDB:CLSN2684548
            EMBL:BT024746 EMBL:AK118624 IPI:IPI00527422 PIR:T10207
            RefSeq:NP_193041.1 UniGene:At.33422 ProteinModelPortal:Q9SV64
            SMR:Q9SV64 STRING:Q9SV64 PRIDE:Q9SV64 EnsemblPlants:AT4G13050.1
            GeneID:826919 KEGG:ath:AT4G13050 TAIR:At4g13050 InParanoid:Q9SV64
            OMA:LRCHTPP PhylomeDB:Q9SV64 Genevestigator:Q9SV64 Uniprot:Q9SV64
        Length = 367

 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 89/197 (45%), Positives = 122/197 (61%)

Query:    89 DPYRHGLIIEGGVGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFG 148
             D  R G ++E G  Y++  +VRSYEVG +KTAT+E+I NL QE A NHV   G  ++GF 
Sbjct:    69 DRLRFGRLMEDGFSYKEKFIVRSYEVGINKTATIETIANLLQEVACNHVQNVGFSTDGFA 128

Query:   149 ATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIF 208
              T  M + +LIWV +RM +EI  YP W +VVEI+TW  + G+ G RRDW+++  ATG + 
Sbjct:   129 TTLTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDCATGEVI 188

Query:   209 ARATSTWVMMNQQTRRLSKIPAEVRAEISPWFIDKQ--AIIEDVP---EKISKLDDTAKY 263
              RATS WVMMNQ TRRL ++  EVR E   +   +   A  E+     +KI KL+D A+Y
Sbjct:   189 GRATSKWVMMNQDTRRLQRVTDEVRDEYLVFCPPEPRLAFPEENNSSLKKIPKLEDPAQY 248

Query:   264 V-------NSDLKVNKH 273
                      +DL +N+H
Sbjct:   249 SMLGLKPRRADLDMNQH 265


>TAIR|locus:2090285 [details] [associations]
            symbol:FaTA "AT3G25110" species:3702 "Arabidopsis
            thaliana" [GO:0000036 "ACP phosphopantetheine attachment site
            binding involved in fatty acid biosynthetic process" evidence=ISS]
            [GO:0006633 "fatty acid biosynthetic process" evidence=IGI;ISS]
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016790 "thiolester
            hydrolase activity" evidence=IEA] [GO:0016297
            "acyl-[acyl-carrier-protein] hydrolase activity" evidence=IDA]
            InterPro:IPR002864 Pfam:PF01643 GO:GO:0009507 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006633 EMBL:AB026647 GO:GO:0016295
            GO:GO:0004320 GO:GO:0016296 EMBL:Z36912 EMBL:AK176105
            IPI:IPI00530028 PIR:S69197 RefSeq:NP_189147.1 UniGene:At.19907
            ProteinModelPortal:Q42561 SMR:Q42561 STRING:Q42561 PaxDb:Q42561
            PRIDE:Q42561 EnsemblPlants:AT3G25110.1 GeneID:822102
            KEGG:ath:AT3G25110 TAIR:At3g25110 eggNOG:COG3884
            HOGENOM:HOG000237896 InParanoid:Q42561 KO:K10782 OMA:DTRRLQK
            PhylomeDB:Q42561 ProtClustDB:CLSN2684548
            BioCyc:MetaCyc:AT3G25110-MONOMER Genevestigator:Q42561
            GO:GO:0016297 Uniprot:Q42561
        Length = 362

 Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 88/197 (44%), Positives = 120/197 (60%)

Query:    89 DPYRHGLIIEGGVGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFG 148
             D  R G + E G+ Y++  VVRSYEVG +KTAT+E+I NL QE   NH    G  ++GF 
Sbjct:    70 DQLRLGSLTEDGLSYKEKFVVRSYEVGSNKTATVETIANLLQEVGCNHAQSVGFSTDGFA 129

Query:   149 ATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIF 208
              T  M + +LIWV +RM +EI  YP WG+VVEI+TW  + G+ G RRDW+++   TG + 
Sbjct:   130 TTTTMRKLHLIWVTARMHIEIYKYPAWGDVVEIETWCQSEGRIGTRRDWILKDSVTGEVT 189

Query:   209 ARATSTWVMMNQQTRRLSKIPAEVRAEISPWFIDKQ--AIIEDVP---EKISKLDDTAKY 263
              RATS WVMMNQ TRRL K+  +VR E   +   +   A  E+     +KI KL+D A+Y
Sbjct:   190 GRATSKWVMMNQDTRRLQKVSDDVRDEYLVFCPQEPRLAFPEENNRSLKKIPKLEDPAQY 249

Query:   264 V-------NSDLKVNKH 273
                      +DL +N+H
Sbjct:   250 SMIGLKPRRADLDMNQH 266


>UNIPROTKB|Q3ADW4 [details] [associations]
            symbol:CHY_0816 "Acyl carrier protein thioesterase,
            homolog" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0000036 "ACP phosphopantetheine attachment site binding
            involved in fatty acid biosynthetic process" evidence=ISS]
            [GO:0006633 "fatty acid biosynthetic process" evidence=ISS]
            InterPro:IPR002864 Pfam:PF01643 EMBL:CP000141
            GenomeReviews:CP000141_GR GO:GO:0016790 GO:GO:0000036
            eggNOG:COG3884 RefSeq:YP_359670.1 STRING:Q3ADW4 GeneID:3726821
            KEGG:chy:CHY_0816 PATRIC:21274768 HOGENOM:HOG000054733 OMA:YNRFFEY
            BioCyc:CHYD246194:GJCN-816-MONOMER Uniprot:Q3ADW4
        Length = 252

 Score = 125 (49.1 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 42/164 (25%), Positives = 72/164 (43%)

Query:   112 YEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDH 171
             Y+V   K   + S++N F + A        + S   G    + +NNL WV+    +++D 
Sbjct:    15 YDVDYQKRTLITSLINYFNDIAF-------VQSENLGGIAYLTQNNLGWVLMNWDIKVDR 67

Query:   172 YPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAE 231
             YP + E V + T   +  K    R W       G   A+A S W+++N + RR  KI   
Sbjct:    68 YPRFNERVLVRTAPHSFNKFFAYR-WFEIYDKNGIKIAKANSRWLLINTEKRRPVKINDY 126

Query:   232 VRAEISPWFIDKQAIIEDVPEKISKLDDTAKY-VN-SDLKVNKH 273
             +       + +   +  + P+K+  +D   ++ V  SDL  N H
Sbjct:   127 LYGIYGVSYENNNILPIEEPQKLLSIDIEKQFEVRYSDLDSNGH 170


>TIGR_CMR|CHY_0816 [details] [associations]
            symbol:CHY_0816 "acyl carrier protein thioesterase,
            homolog" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0000036 "ACP phosphopantetheine attachment site binding
            involved in fatty acid biosynthetic process" evidence=ISS]
            [GO:0006633 "fatty acid biosynthetic process" evidence=ISS]
            InterPro:IPR002864 Pfam:PF01643 EMBL:CP000141
            GenomeReviews:CP000141_GR GO:GO:0016790 GO:GO:0000036
            eggNOG:COG3884 RefSeq:YP_359670.1 STRING:Q3ADW4 GeneID:3726821
            KEGG:chy:CHY_0816 PATRIC:21274768 HOGENOM:HOG000054733 OMA:YNRFFEY
            BioCyc:CHYD246194:GJCN-816-MONOMER Uniprot:Q3ADW4
        Length = 252

 Score = 125 (49.1 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 42/164 (25%), Positives = 72/164 (43%)

Query:   112 YEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDH 171
             Y+V   K   + S++N F + A        + S   G    + +NNL WV+    +++D 
Sbjct:    15 YDVDYQKRTLITSLINYFNDIAF-------VQSENLGGIAYLTQNNLGWVLMNWDIKVDR 67

Query:   172 YPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAE 231
             YP + E V + T   +  K    R W       G   A+A S W+++N + RR  KI   
Sbjct:    68 YPRFNERVLVRTAPHSFNKFFAYR-WFEIYDKNGIKIAKANSRWLLINTEKRRPVKINDY 126

Query:   232 VRAEISPWFIDKQAIIEDVPEKISKLDDTAKY-VN-SDLKVNKH 273
             +       + +   +  + P+K+  +D   ++ V  SDL  N H
Sbjct:   127 LYGIYGVSYENNNILPIEEPQKLLSIDIEKQFEVRYSDLDSNGH 170


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.132   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      293       293   0.00091  115 3  11 22  0.36    34
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  620 (66 KB)
  Total size of DFA:  222 KB (2121 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.38u 0.10s 23.48t   Elapsed:  00:00:01
  Total cpu time:  23.38u 0.10s 23.48t   Elapsed:  00:00:01
  Start:  Fri May 10 16:06:46 2013   End:  Fri May 10 16:06:47 2013

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