Query 022737
Match_columns 293
No_of_seqs 275 out of 1241
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 05:46:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022737.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022737hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02370 acyl-ACP thioesterase 100.0 4.5E-49 9.7E-54 380.4 20.2 232 50-288 94-349 (419)
2 PF01643 Acyl-ACP_TE: Acyl-ACP 100.0 2.5E-36 5.5E-41 277.1 14.9 184 100-288 1-213 (261)
3 PRK10800 acyl-CoA thioesterase 100.0 3E-27 6.5E-32 194.3 17.6 128 102-236 2-129 (130)
4 TIGR02799 thio_ybgC tol-pal sy 99.9 2.1E-25 4.6E-30 181.2 15.8 124 103-234 1-125 (126)
5 COG0824 FcbC Predicted thioest 99.9 1.5E-24 3.2E-29 181.3 16.7 132 100-239 3-134 (137)
6 TIGR00051 acyl-CoA thioester h 99.9 2E-24 4.3E-29 172.5 15.1 117 106-229 1-117 (117)
7 COG3884 FatA Acyl-ACP thioeste 99.9 5.5E-25 1.2E-29 194.8 11.7 174 102-284 3-196 (250)
8 PF13279 4HBT_2: Thioesterase- 99.9 4.7E-21 1E-25 154.7 15.6 119 109-236 1-121 (121)
9 PRK07531 bifunctional 3-hydrox 99.9 6.2E-21 1.3E-25 189.8 17.0 133 99-239 342-474 (495)
10 cd00586 4HBT 4-hydroxybenzoyl- 99.8 4.3E-17 9.3E-22 126.3 14.7 110 103-219 1-110 (110)
11 PF01643 Acyl-ACP_TE: Acyl-ACP 99.6 1.5E-14 3.2E-19 133.0 10.8 132 64-216 111-260 (261)
12 PLN02370 acyl-ACP thioesterase 99.4 5.2E-13 1.1E-17 129.9 10.9 134 64-218 247-403 (419)
13 cd03442 BFIT_BACH Brown fat-in 99.4 1.4E-11 2.9E-16 98.8 15.7 113 101-229 6-123 (123)
14 COG3884 FatA Acyl-ACP thioeste 99.2 1.7E-11 3.7E-16 109.3 7.7 125 64-215 104-239 (250)
15 cd03440 hot_dog The hotdog fol 99.0 1.3E-08 2.7E-13 73.7 13.3 98 104-215 2-99 (100)
16 PF03061 4HBT: Thioesterase su 98.9 4.2E-08 9E-13 72.4 12.8 79 117-209 1-79 (79)
17 cd03443 PaaI_thioesterase PaaI 98.7 6.8E-07 1.5E-11 70.4 14.3 102 100-216 11-112 (113)
18 PRK10694 acyl-CoA esterase; Pr 98.5 6.5E-06 1.4E-10 68.6 14.3 112 103-230 12-131 (133)
19 COG1607 Acyl-CoA hydrolase [Li 98.1 0.00019 4.1E-09 61.4 14.9 114 104-232 15-132 (157)
20 TIGR02286 PaaD phenylacetic ac 97.8 0.0013 2.8E-08 52.6 13.9 97 104-217 17-113 (114)
21 TIGR00369 unchar_dom_1 unchara 97.7 0.0013 2.9E-08 52.7 13.4 99 103-216 18-116 (117)
22 PF12590 Acyl-thio_N: Acyl-ATP 97.7 3.9E-06 8.5E-11 68.1 -1.7 28 49-78 96-123 (129)
23 PLN02647 acyl-CoA thioesterase 97.4 0.0022 4.7E-08 63.4 12.9 116 108-230 99-221 (437)
24 PRK10293 acyl-CoA esterase; Pr 97.3 0.015 3.3E-07 48.5 14.3 101 103-218 36-136 (136)
25 PRK10254 thioesterase; Provisi 97.1 0.043 9.2E-07 45.9 15.2 102 102-218 35-136 (137)
26 PRK11688 hypothetical protein; 96.8 0.049 1.1E-06 46.0 13.8 111 103-217 39-153 (154)
27 COG2050 PaaI HGG motif-contain 96.8 0.062 1.3E-06 44.6 13.8 105 102-220 35-139 (141)
28 cd03449 R_hydratase (R)-hydrat 96.6 0.03 6.6E-07 44.7 10.6 56 159-215 69-126 (128)
29 COG5496 Predicted thioesterase 96.5 0.18 3.9E-06 41.6 14.0 109 99-222 3-118 (130)
30 KOG3328 HGG motif-containing t 96.2 0.076 1.7E-06 44.9 10.7 101 103-217 39-139 (148)
31 PLN02322 acyl-CoA thioesterase 96.1 0.34 7.3E-06 41.4 14.6 104 102-219 27-135 (154)
32 PLN02647 acyl-CoA thioesterase 95.5 0.44 9.6E-06 47.3 14.7 114 103-230 291-414 (437)
33 cd03455 SAV4209 SAV4209 is a S 95.3 0.15 3.3E-06 41.0 9.0 55 160-215 67-122 (123)
34 COG4109 Predicted transcriptio 95.2 0.13 2.8E-06 49.5 9.1 103 97-216 327-429 (432)
35 PRK13691 (3R)-hydroxyacyl-ACP 95.1 0.32 6.8E-06 41.9 10.8 67 161-228 85-155 (166)
36 cd00556 Thioesterase_II Thioes 94.9 0.19 4.2E-06 38.1 8.0 57 159-216 42-98 (99)
37 cd01288 FabZ FabZ is a 17kD be 94.8 0.32 6.9E-06 39.0 9.6 86 120-217 45-130 (131)
38 cd03441 R_hydratase_like (R)-h 94.6 0.39 8.5E-06 38.0 9.6 56 158-214 66-125 (127)
39 cd03447 FAS_MaoC FAS_MaoC, the 94.6 0.48 1E-05 38.7 10.2 54 161-215 69-123 (126)
40 PRK13692 (3R)-hydroxyacyl-ACP 94.4 0.56 1.2E-05 40.1 10.6 60 163-223 87-150 (159)
41 PRK00006 fabZ (3R)-hydroxymyri 94.3 2.6 5.7E-05 34.8 16.0 59 159-219 87-146 (147)
42 cd03446 MaoC_like MoaC_like 94.2 0.34 7.3E-06 39.5 8.4 51 165-216 83-139 (140)
43 TIGR01750 fabZ beta-hydroxyacy 94.1 2.7 5.9E-05 34.4 13.9 86 120-216 53-139 (140)
44 cd03453 SAV4209_like SAV4209_l 94.0 0.5 1.1E-05 38.2 9.1 52 162-214 70-125 (127)
45 cd03454 YdeM YdeM is a Bacillu 94.0 0.34 7.4E-06 39.7 8.1 51 165-216 81-138 (140)
46 PRK04424 fatty acid biosynthes 93.8 0.67 1.5E-05 40.5 10.1 59 157-217 123-181 (185)
47 PF14539 DUF4442: Domain of un 93.7 1.5 3.2E-05 36.1 11.4 99 102-216 30-131 (132)
48 cd03451 FkbR2 FkbR2 is a Strep 93.6 0.44 9.6E-06 39.1 8.2 52 165-217 84-142 (146)
49 cd00493 FabA_FabZ FabA/Z, beta 93.2 3.5 7.7E-05 32.7 12.9 86 117-212 41-126 (131)
50 KOG4366 Predicted thioesterase 92.1 0.025 5.4E-07 49.6 -1.5 106 107-219 55-161 (213)
51 cd03452 MaoC_C MaoC_C The C-t 91.3 1.2 2.7E-05 36.8 8.1 52 165-217 81-138 (142)
52 PF13452 MaoC_dehydrat_N: N-te 91.2 0.91 2E-05 36.7 7.0 51 159-210 74-131 (132)
53 PRK08190 bifunctional enoyl-Co 91.2 2 4.3E-05 43.0 10.7 66 159-225 82-149 (466)
54 cd03445 Thioesterase_II_repeat 90.2 2.7 5.7E-05 32.6 8.4 54 160-215 39-92 (94)
55 PF13622 4HBT_3: Thioesterase- 89.6 2.6 5.7E-05 37.8 9.2 57 160-219 34-90 (255)
56 TIGR02447 yiiD_Cterm thioester 89.1 12 0.00025 31.0 12.9 101 103-218 24-137 (138)
57 PLN02864 enoyl-CoA hydratase 86.7 4 8.6E-05 38.7 8.7 59 161-219 95-157 (310)
58 cd01289 FabA_like Domain of un 84.8 21 0.00045 29.4 11.3 89 117-215 44-134 (138)
59 PF03756 AfsA: A-factor biosyn 83.3 11 0.00025 30.4 9.0 89 116-217 39-132 (132)
60 COG2030 MaoC Acyl dehydratase 79.5 13 0.00028 31.5 8.3 59 159-218 93-155 (159)
61 TIGR00189 tesB acyl-CoA thioes 78.8 8.7 0.00019 35.0 7.5 55 160-216 44-98 (271)
62 PF07977 FabA: FabA-like domai 78.5 17 0.00038 29.6 8.5 100 104-212 28-138 (138)
63 PRK13188 bifunctional UDP-3-O- 77.4 24 0.00051 35.5 10.5 60 158-219 401-461 (464)
64 COG0764 FabA 3-hydroxymyristoy 76.1 39 0.00084 28.6 10.1 60 158-219 85-145 (147)
65 cd03444 Thioesterase_II_repeat 75.9 20 0.00044 28.0 7.9 57 159-216 47-103 (104)
66 cd03448 HDE_HSD HDE_HSD The R 72.7 22 0.00049 28.7 7.6 48 160-212 70-117 (122)
67 PF01575 MaoC_dehydratas: MaoC 69.4 12 0.00027 29.7 5.4 32 159-190 75-106 (122)
68 PRK10526 acyl-CoA thioesterase 68.3 24 0.00052 32.9 7.8 55 160-216 55-109 (286)
69 cd01287 FabA FabA, beta-hydrox 66.7 54 0.0012 27.6 9.0 59 158-218 84-147 (150)
70 PRK11563 bifunctional aldehyde 62.1 22 0.00047 37.3 6.8 49 166-215 617-671 (675)
71 TIGR02278 PaaN-DH phenylacetic 61.9 26 0.00057 36.7 7.4 51 165-216 604-660 (663)
72 TIGR02799 thio_ybgC tol-pal sy 61.3 4.5 9.7E-05 32.0 1.3 24 248-271 3-31 (126)
73 TIGR00051 acyl-CoA thioester h 61.2 4.3 9.4E-05 31.3 1.2 23 250-272 2-29 (117)
74 PF13622 4HBT_3: Thioesterase- 58.9 1.1E+02 0.0023 27.2 10.1 54 162-216 200-254 (255)
75 PLN02864 enoyl-CoA hydratase 58.3 68 0.0015 30.3 8.9 52 160-216 253-304 (310)
76 PRK13693 (3R)-hydroxyacyl-ACP 57.8 1.1E+02 0.0023 25.3 9.5 52 163-215 81-139 (142)
77 PRK10800 acyl-CoA thioesterase 57.1 5.5 0.00012 32.0 1.2 25 248-272 5-34 (130)
78 PF02551 Acyl_CoA_thio: Acyl-C 57.1 88 0.0019 26.1 8.3 98 107-215 32-130 (131)
79 TIGR00189 tesB acyl-CoA thioes 55.9 68 0.0015 29.1 8.3 55 161-216 215-269 (271)
80 COG1946 TesB Acyl-CoA thioeste 55.8 1.6E+02 0.0034 27.9 10.6 105 105-218 178-283 (289)
81 COG0824 FcbC Predicted thioest 55.5 5.5 0.00012 32.9 0.9 31 247-278 7-42 (137)
82 cd03450 NodN NodN (nodulation 52.0 1.4E+02 0.0031 24.9 9.4 28 160-187 85-112 (149)
83 PLN02868 acyl-CoA thioesterase 44.5 73 0.0016 31.1 7.0 56 160-217 181-236 (413)
84 PRK10526 acyl-CoA thioesterase 41.7 1.3E+02 0.0029 27.8 8.0 58 159-217 225-282 (286)
85 PF13279 4HBT_2: Thioesterase- 41.4 15 0.00032 28.8 1.3 25 252-277 1-29 (121)
86 PF11456 DUF3019: Protein of u 32.1 1.3E+02 0.0028 23.8 5.3 34 196-229 66-99 (102)
87 PLN02868 acyl-CoA thioesterase 26.1 1.8E+02 0.004 28.3 6.4 54 161-215 358-411 (413)
88 KOG2763 Acyl-CoA thioesterase 24.3 3.3E+02 0.0071 26.6 7.5 71 159-230 60-136 (357)
89 PRK05174 3-hydroxydecanoyl-(ac 21.6 5.2E+02 0.011 22.2 12.8 82 120-216 78-163 (172)
No 1
>PLN02370 acyl-ACP thioesterase
Probab=100.00 E-value=4.5e-49 Score=380.40 Aligned_cols=232 Identities=46% Similarity=0.772 Sum_probs=204.4
Q ss_pred cccccceeeeeehhhhcccccccccccccccCCCcccccccccccccccCCceEEEEEEeeecCCCCCCCcCHHHHHHHH
Q 022737 50 SQTTGVASTFVASVAAEKEGCRINEVQIRQNIPTKKQFVDPYRHGLIIEGGVGYRQTVVVRSYEVGPDKTATLESILNLF 129 (293)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~VR~~D~D~~GhV~~~~yl~~~ 129 (293)
||.++++||||. |||+||+|+|++.+| +++++|+|++|+|++++..|+++++||+||||.+|+++++.+++||
T Consensus 94 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~y~~~f~Ir~yEvD~~g~lsl~~L~n~l 166 (419)
T PLN02370 94 SMLLAAITTIFL--AAEKQWMMLDWKPRR-----SDMLIDPFGIGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHL 166 (419)
T ss_pred HHHHHHHHHHHH--hhhhhhhhhcccCCC-----CcccccccccCceeccCcEEEEEEEEeeEEECCCCCCCHHHHHHHH
Confidence 678889999998 999999999999999 4678999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEE
Q 022737 130 QETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFA 209 (293)
Q Consensus 130 qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia 209 (293)
||++.+|+...+.++.||+..++|.+.|++|||++++|+|.|+|+|||+|+|+||+.+.++.++.|+|+|+|.++|++++
T Consensus 167 Qd~A~~Hs~~lGll~~Gfg~~~~m~~~gl~WVLtr~~I~~~R~P~~gD~V~V~Twv~~~~k~~~~Rdf~I~D~~~Ge~la 246 (419)
T PLN02370 167 QETALNHVKTAGLLGDGFGSTPEMSKRNLIWVVTRMQVLVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVRDCKTGETLT 246 (419)
T ss_pred HHHHHHHHHHhCccccccccHHHHHhCCceEEEEEEEEEeCcCCCCCCEEEEEEEEeeCCCCEEEEEEEEEECCCCeEEE
Confidence 99999997544444445654457889999999999999999999999999999999999999999999999844899999
Q ss_pred EEEEEEEEEeccCCccccCCHHHHHhcCccccc----------cccc---------ccccccCcccCCc-----chhhHH
Q 022737 210 RATSTWVMMNQQTRRLSKIPAEVRAEISPWFID----------KQAI---------IEDVPEKISKLDD-----TAKYVN 265 (293)
Q Consensus 210 ~a~s~wV~vD~~trRpvriP~ev~~~l~~~~~e----------~~~~---------~~~~~vr~sdlD~-----Na~Yi~ 265 (293)
+|.|+||+||+++|||+|||+++++.+.++..+ +.+. ...+++||+|||. |++|++
T Consensus 247 ~A~SvWV~mD~~TRRpvRIP~Evr~~i~~y~~~~~~~i~~~~~kl~~l~~~~~~~~~~~~~VRysDLD~NgHVNNvkYi~ 326 (419)
T PLN02370 247 RASSVWVMMNKLTRRLSKIPEEVRGEIEPYFLNSDPVVNEDSRKLPKLDDKTADYIRKGLTPRWSDLDVNQHVNNVKYIG 326 (419)
T ss_pred EEEEEEEEEECCCCcccCCCHHHHHhhhhcccccccccccccccCCccccccccceeeeeeecHHHCcccCccccHHHHH
Confidence 999999999999999999999997766554321 1111 1237899999998 999999
Q ss_pred HHHhhchHhHHhhhhhhhhhhhc
Q 022737 266 SDLKVNKHQTKRLICLQLLCSSF 288 (293)
Q Consensus 266 ~~~d~lp~e~~~~~~l~~~~~~~ 288 (293)
|++|+||.||+++|+|+.+-+.|
T Consensus 327 Wild~lP~e~l~~~~l~~i~I~Y 349 (419)
T PLN02370 327 WILESAPPPIMESHELAAITLEY 349 (419)
T ss_pred HHHhhCchhhhhcceEEEEEEEE
Confidence 99999999999999998876654
No 2
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=100.00 E-value=2.5e-36 Score=277.14 Aligned_cols=184 Identities=33% Similarity=0.576 Sum_probs=140.5
Q ss_pred CceEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcch-----hhhcCCeeEEEeEeEEEEcccCC
Q 022737 100 GVGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATH-----GMMRNNLIWVVSRMQVEIDHYPI 174 (293)
Q Consensus 100 ~~~f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~-----~l~~~g~~wVV~r~~I~y~r~p~ 174 (293)
|..|+++++|+++|||.+|+++++.+++||||++..|+.. .|+|... .|.+.|++|||+++++++.++|+
T Consensus 1 g~~y~~~~~v~~~e~d~~~~l~l~~l~~~~qe~a~~h~~~-----lG~~~~~~~~~~~l~~~~~~Wvl~r~~i~i~r~P~ 75 (261)
T PF01643_consen 1 GLVYEKEFTVRYYECDPNGRLKLSALLNYFQEAATEHAES-----LGFGMDYFGSTPELKKQGLAWVLSRYQIEIHRYPR 75 (261)
T ss_dssp ---EEEEEE--GGGB-TTSBB-HHHHHHHHHHHHHHHHHH-----TT-SHHH------HHCTTEEEEEEEEEEEESS--B
T ss_pred CceEEEEEEEcceeeCCCCCCCHHHHHHHHHHHHHHHHHH-----hCCCcccchhhhhHhhcCcEEEEEEEEEEEEecCC
Confidence 5689999999999999999999999999999999999742 4666542 28999999999999999999999
Q ss_pred CCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEEEeccCCccccCCHHHHHhcCcccc--------c---c
Q 022737 175 WGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRAEISPWFI--------D---K 243 (293)
Q Consensus 175 ~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~trRpvriP~ev~~~l~~~~~--------e---~ 243 (293)
+||+|+|+||+.+.+++++.|+|.|+|.++|+++++|.|.|++||+++|||+|+|+++.+.+.+..+ . +
T Consensus 76 ~~e~i~i~Tw~~~~~~~~~~R~f~i~d~~~G~~l~~a~s~WvliD~~trr~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (261)
T PF01643_consen 76 WGEKITIETWPSGFKRFFAYRDFEIYDAEDGELLARATSIWVLIDLETRRPVRIPEEIIEEYGPFFPDELPEEDIRKLPK 155 (261)
T ss_dssp TT-EEEEEEEEEEE-SSEEEEEEEEE--TTS-EEEEEEEEEEEEETTT-SEE---GGCTCCGGGGB----T-EESSS---
T ss_pred CCCEEEEEEEeccCCCcEEEEEEEEEECCCCcEEEEEEEEEEEEEhhhCCcccCCHHHHhhhhhhccccccccccccccc
Confidence 9999999999999999999999999965799999999999999999999999999988876631111 0 1
Q ss_pred c--------ccccccccCcccCCc-----chhhHHHHHhhchHhHHhhhhhhhhhhhc
Q 022737 244 Q--------AIIEDVPEKISKLDD-----TAKYVNSDLKVNKHQTKRLICLQLLCSSF 288 (293)
Q Consensus 244 ~--------~~~~~~~vr~sdlD~-----Na~Yi~~~~d~lp~e~~~~~~l~~~~~~~ 288 (293)
. ....++++|++|||. |++|++|++|+||.|++++|.++.+-+.|
T Consensus 156 ~~~~~~~~~~~~~~~~vr~sDiD~N~HVNN~~Yl~w~~d~lp~~~~~~~~~~~i~I~y 213 (261)
T PF01643_consen 156 IPKNPPEEPEFEKEFTVRYSDIDMNGHVNNARYLDWALDALPEEFLEKYQIKSIDINY 213 (261)
T ss_dssp -------TTSECEEEE--GGGEETTTCE-HHHHHHHHHCCS-HHHHCCEEEEEEEEEE
T ss_pred ccccCChhhheeecccccHHHCCCCCCcCHHHHHHHHHHhCcchhhccCCcEEEEEEE
Confidence 1 112458899999998 99999999999999999999998876655
No 3
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=99.95 E-value=3e-27 Score=194.33 Aligned_cols=128 Identities=15% Similarity=0.208 Sum_probs=116.5
Q ss_pred eEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEE
Q 022737 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (293)
Q Consensus 102 ~f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I 181 (293)
.|..+++|||+|||++|||+|++|++|||+|+.+|+.. .|++.. .+.+.|.+|++++++++|.+|+++||+|+|
T Consensus 2 ~f~~~~~Vr~~d~D~~Ghv~~~~y~~~~e~a~~~~~~~-----~g~~~~-~~~~~~~~~~v~~~~i~y~~~~~~~d~i~v 75 (130)
T PRK10800 2 LFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRH-----HHFSQQ-ALLAERVAFVVRKMTVEYYAPARLDDMLEV 75 (130)
T ss_pred ceEEEEEEeehhcCCCCeEehHHHHHHHHHHHHHHHHH-----cCCCHH-HHHhCCCEEEEEEEEEEEcCcccCCCEEEE
Confidence 47889999999999999999999999999999998641 355542 456788999999999999999999999999
Q ss_pred EEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEEEeccCCccccCCHHHHHhc
Q 022737 182 DTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRAEI 236 (293)
Q Consensus 182 ~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~trRpvriP~ev~~~l 236 (293)
+||+.++++.++...|++++ .+|+++++|.++||++|.+++||+++|+++++.+
T Consensus 76 ~t~v~~~~~~s~~~~~~i~~-~~g~~~a~~~~~~v~~d~~~~r~~~iP~~l~~~~ 129 (130)
T PRK10800 76 QSEITSMRGTSLTFTQRIVN-AEGTLLNEAEVLIVCVDPLKMKPRALPKSIVAEF 129 (130)
T ss_pred EEEEEeeCcEEEEEEEEEEc-CCCeEEEEEEEEEEEEECCCCcCcCCCHHHHHhh
Confidence 99999999999998999997 6899999999999999999999999999998865
No 4
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=99.93 E-value=2.1e-25 Score=181.25 Aligned_cols=124 Identities=16% Similarity=0.235 Sum_probs=112.5
Q ss_pred EEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhh-hcCCeeEEEeEeEEEEcccCCCCCEEEE
Q 022737 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGM-MRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (293)
Q Consensus 103 f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l-~~~g~~wVV~r~~I~y~r~p~~gD~V~I 181 (293)
|+.+++|||+|||++|||+|++|++||++|+..++.. .|++.. .+ .+.|.+|++++++++|.+|+++||+|.|
T Consensus 1 f~~~~~vr~~d~D~~Ghv~~~~y~~~~~~a~~~~~~~-----~g~~~~-~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v 74 (126)
T TIGR02799 1 FRWPIRVYYEDTDAGGVVYHANYLKFMERARTEWLRA-----LGFEQS-ALLEETGLVFVVRSMELDYLKPARLDDLLTV 74 (126)
T ss_pred CcceEEEEEeccCCCceEEechHHHHHHHHHHHHHHH-----cCCCHH-HHhhcCCcEEEEEEEEEEEcCcccCCCEEEE
Confidence 4678999999999999999999999999999998641 366543 35 4669999999999999999999999999
Q ss_pred EEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEEEeccCCccccCCHHHHH
Q 022737 182 DTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRA 234 (293)
Q Consensus 182 ~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~trRpvriP~ev~~ 234 (293)
+||+.+.++.++.+.|.+++ +|+++++|.++||++|.++|||+++|+++++
T Consensus 75 ~~~v~~~~~~~~~~~~~i~~--~g~~~a~~~~~~v~vd~~~~~~~~~p~~~~~ 125 (126)
T TIGR02799 75 TTRVVELKGASLVFAQEVRR--GDTLLCEATVEVACVDASDMRPRRLPAELRA 125 (126)
T ss_pred EEEEEecCceEEEEEEEEEe--CCEEEEEEEEEEEEEECCCCcCcCCCHHHhh
Confidence 99999999999999999994 7899999999999999999999999999875
No 5
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=99.93 E-value=1.5e-24 Score=181.29 Aligned_cols=132 Identities=17% Similarity=0.282 Sum_probs=119.2
Q ss_pred CceEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEE
Q 022737 100 GVGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVV 179 (293)
Q Consensus 100 ~~~f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V 179 (293)
...|+.+++|||+|+|.+|||||++|+.||++|+++++.. .|++.. .+.+.|+.|++++.+|+|++|.++||.+
T Consensus 3 ~~~~~~~~~V~~~d~D~~GhV~~a~Yl~~fE~ar~~~l~~-----~g~~~~-~~~~~~~~~~v~~~~i~y~~p~~~~d~l 76 (137)
T COG0824 3 SFPFSTPIRVRYEDTDAMGHVNNANYLVFFEEARTEFLRA-----LGFDYA-DLEEGGIAFVVVEAEIDYLRPARLGDVL 76 (137)
T ss_pred CcceEEEEEEEhhhcCcccEEecchHHHHHHHHHHHHHHH-----cCCCHH-HHhhCCcEEEEEEEEeEECCCccCCCEE
Confidence 3578899999999999999999999999999999999741 366543 5666689999999999999999999999
Q ss_pred EEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEEEeccCCccccCCHHHHHhcCcc
Q 022737 180 EIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRAEISPW 239 (293)
Q Consensus 180 ~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~trRpvriP~ev~~~l~~~ 239 (293)
+|+|++.++++.++...|+|.+ ++ +++++|++++|++|.+++||+++|+++++.+...
T Consensus 77 ~v~~~v~~~~~~s~~~~~~i~~-~~-~l~a~~~~~~V~v~~~~~kp~~~P~~~~~~l~~~ 134 (137)
T COG0824 77 TVRTRVEELGGKSLTLGYEIVN-ED-ELLATGETTLVCVDLKTGKPVPLPPELREALEAL 134 (137)
T ss_pred EEEEEEEeecCeEEEEEEEEEe-CC-EEEEEEEEEEEEEECCCCCcccCCHHHHHHHHHh
Confidence 9999999999999999999997 44 9999999999999999999999999999887643
No 6
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=99.92 E-value=2e-24 Score=172.50 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=105.4
Q ss_pred EEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEEEEE
Q 022737 106 TVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWV 185 (293)
Q Consensus 106 ~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~T~v 185 (293)
+++|||+|||++|||+|+.|++|||+|+..|+.. .|++.. .+.+.|++|++++++++|++|+++||.|.|+||+
T Consensus 1 ~~~V~~~d~D~~G~v~~~~y~~~~~~a~~~~~~~-----~g~~~~-~~~~~~~~~~v~~~~i~y~~~~~~gd~v~v~~~~ 74 (117)
T TIGR00051 1 PVRVYYEDTDAQGIVYHANYLRYCERARTEFLRS-----LGFPQS-VLRAEGVAFVVVNINIEYKKPARLDDVLEIRTQI 74 (117)
T ss_pred CEEEEEeccCCCcEEEehHHHHHHHHHHHHHHHH-----cCCCHH-HHHhCCCEEEEEEEEEEECCcccCCCEEEEEEEE
Confidence 3689999999999999999999999999999641 355432 5677899999999999999999999999999999
Q ss_pred eeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEEEeccCCccccCC
Q 022737 186 GASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIP 229 (293)
Q Consensus 186 ~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~trRpvriP 229 (293)
.+.++.++.+.|++++ ++|++++.+.+.||++|.++|||+++|
T Consensus 75 ~~~~~~s~~~~~~i~~-~~~~~~~~~~~~~v~~d~~~~r~~~ip 117 (117)
T TIGR00051 75 EELNGFSFVFSQEIFN-EDEALLKAATVIVVCVDPKKQKPVAIP 117 (117)
T ss_pred EecCcEEEEEEEEEEe-CCCcEEEeeEEEEEEEECCCCeEcCCC
Confidence 9999999999999997 677888888888999999999999997
No 7
>COG3884 FatA Acyl-ACP thioesterase [Lipid metabolism]
Probab=99.92 E-value=5.5e-25 Score=194.84 Aligned_cols=174 Identities=22% Similarity=0.313 Sum_probs=151.4
Q ss_pred eEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcc--hhhhcCCeeEEEeEeEEEEcccCCCCCEE
Q 022737 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGAT--HGMMRNNLIWVVSRMQVEIDHYPIWGEVV 179 (293)
Q Consensus 102 ~f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~--~~l~~~g~~wVV~r~~I~y~r~p~~gD~V 179 (293)
.+...+.|.+++.|+.|++..+..+.+..+++..+ +.|+|.. ..+.+.++.|+|.++.+++.|||.+||.|
T Consensus 3 ~~k~~~~vP~~~~d~~g~i~~~~~l~l~~~i~~~Q-------si~lg~~~~~~lee~~l~WiV~~~~i~~ir~pef~e~i 75 (250)
T COG3884 3 VDKQNMPVPFYWPDAVGDIDITSRLRLDLQIRGIQ-------SIGLGQLDVAGLEEYHLLWIVRRTEIDVIRPPEFGEMI 75 (250)
T ss_pred chhhcCCCccchhhhcCCcchhhhhhhhhhhccee-------ecccchhhhhhHhhcCceEEEEEEEEEEeeccccCCcc
Confidence 45667888899999999999999999999998766 2355422 24789999999999999999999999999
Q ss_pred EEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEEEeccCCccccCCHHHHHhcCcccccc-----------c--cc
Q 022737 180 EIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRAEISPWFIDK-----------Q--AI 246 (293)
Q Consensus 180 ~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~trRpvriP~ev~~~l~~~~~e~-----------~--~~ 246 (293)
+++||+.++.+++++|+|.+.+ .|+.+.++.+.|++||.+||||.++++++.+.+..-+..+ . .+
T Consensus 76 ti~t~~~s~~~ffcyrrf~~~~--~gg~Lie~~a~wilmn~dTrkp~ri~~d~la~~~~t~~~k~~r~~~~l~~~~e~s~ 153 (250)
T COG3884 76 TIETWCSSISNFFCYRRFRLDG--RGGGLIEIEAFWILMNRDTRKPARITDDLLAPFNLTTEKKRLRWPKYLSSRLEASE 153 (250)
T ss_pred eEEEeeccccceEEEEEEEEec--CCCcEEEEEEEEEEEccccccceeccHHHhhhhcccchhheeccccccCccccccc
Confidence 9999999999999999999995 7889999999999999999999999999998887432211 0 12
Q ss_pred ccccccCcccCCc-----chhhHHHHHhhchHhHHhhhhhhhh
Q 022737 247 IEDVPEKISKLDD-----TAKYVNSDLKVNKHQTKRLICLQLL 284 (293)
Q Consensus 247 ~~~~~vr~sdlD~-----Na~Yi~~~~d~lp~e~~~~~~l~~~ 284 (293)
..++++|+.|||. |++|++|++|.||.+|...|.+..+
T Consensus 154 ~~~f~vR~~DID~f~HvNNskY~~wi~e~l~~~~~~~~~p~r~ 196 (250)
T COG3884 154 IHDFPVRYTDIDMFGHVNNSKYWSWIEEVLGSEFLKLYGPLRL 196 (250)
T ss_pred cccceeEEEeeccccccccceehHHHHHHHhhhhHhhccccee
Confidence 3479999999998 9999999999999999999998765
No 8
>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A ....
Probab=99.87 E-value=4.7e-21 Score=154.75 Aligned_cols=119 Identities=21% Similarity=0.271 Sum_probs=96.9
Q ss_pred eeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEEEEEeee
Q 022737 109 VRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGAS 188 (293)
Q Consensus 109 VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~ 188 (293)
|||+||| +|||||++|++||++|+.+++.. .|+ ...+...|+++++++.+++|++|+++||.++|++++.+.
T Consensus 1 Vr~~D~D-~ghv~n~~Y~~~~e~ar~~~~~~-----~g~--~~~~~~~~~~~~v~~~~i~y~~~~~~~d~~~v~~~~~~~ 72 (121)
T PF13279_consen 1 VRWSDTD-NGHVNNARYLRYFEEAREEFLEE-----LGL--YDELQGQGIGFVVAESEIDYLRPLRFGDRLEVETRVEEI 72 (121)
T ss_dssp --GGGB--TSSB-HHHHHHHHHHHHHHHHHH-----HTS--CHHHTTTTEEEEEEEEEEEE-S--BTTSEEEEEEEEEEE
T ss_pred CCHHHcc-CCeEcHHHHHHHHHHHHHHHHHh-----cch--hhHHHhcCceEEEEEEEEEEcccccCCCEEEEEEEEEEE
Confidence 7999999 99999999999999999998631 355 236788899999999999999999999999999999999
Q ss_pred CCcEEEEEEEEEEcCCCcE--EEEEEEEEEEEeccCCccccCCHHHHHhc
Q 022737 189 GKNGMRRDWLIRSQATGHI--FARATSTWVMMNQQTRRLSKIPAEVRAEI 236 (293)
Q Consensus 189 ~~~~~~R~f~I~d~~~Gel--ia~a~s~wV~vD~~trRpvriP~ev~~~l 236 (293)
++.++...|.+++..+|+. +|+|.+++|++|.++ |++++|+++++.+
T Consensus 73 ~~~s~~~~~~i~~~~~g~~~~~a~~~~~~v~~d~~~-r~~~~P~~~~~~l 121 (121)
T PF13279_consen 73 GGKSFRFEQEIFRPADGKGELAATGRTVMVFVDYKT-RSVPIPDELREAL 121 (121)
T ss_dssp ESSEEEEEEEEEECSTTEEEEEEEEEEEEEEEETTT-CE-B--HHHHHHH
T ss_pred CCcEEEEEEEEEEcCCCceEEEEEEEEEEEEEeCCC-CcCCCCHHHHhcC
Confidence 9999999999997335655 999999999999998 6999999999864
No 9
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=99.86 E-value=6.2e-21 Score=189.80 Aligned_cols=133 Identities=14% Similarity=0.114 Sum_probs=118.7
Q ss_pred CCceEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCE
Q 022737 99 GGVGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEV 178 (293)
Q Consensus 99 ~~~~f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~ 178 (293)
+...++.+++|+++|||.+|||||++|++||++++.+|+.. .|++. .....+.+|++++++|+|++|+++||.
T Consensus 342 ~~~~~~~~~~V~~~~~D~~Ghvnn~~Yl~~~e~Ar~~~~~~-----~G~~~--~~~~~~~~~vvv~~~i~y~rp~~~gD~ 414 (495)
T PRK07531 342 SQPLRLVETKVPPAWVDYNGHMTEHRYLQVFGDTTDALLRL-----IGVDA--AYVAAGHSYYTVETHIRHLGEAKAGQA 414 (495)
T ss_pred CCceEEEeEEECHHHcCCCCeEcHHHHHHHHHHHHHHHHHH-----cCCCH--HHHhcCCcEEEEEEEEEEcccCCCCCE
Confidence 33455779999999999999999999999999999999641 35553 234458899999999999999999999
Q ss_pred EEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEEEeccCCccccCCHHHHHhcCcc
Q 022737 179 VEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRAEISPW 239 (293)
Q Consensus 179 V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~trRpvriP~ev~~~l~~~ 239 (293)
|+|+||+...++.++.+.|++++ .+|+++++|.++||++|.++|||+++|+++++.+..+
T Consensus 415 v~I~t~v~~~~~~s~~~~~~i~~-~~g~l~A~g~~~~v~vD~~trr~~~iP~e~r~~l~~~ 474 (495)
T PRK07531 415 LHVETQLLSGDEKRLHLFHTLYD-AGGELIATAEHMLLHVDLKAGKAVPAPAAVLAALKPI 474 (495)
T ss_pred EEEEEEEEecCCcEEEEEEEEEC-CCCcEEEEEEEEEEEEECCCCccCCCCHHHHHHHHHH
Confidence 99999999999999999999997 7899999999999999999999999999999888654
No 10
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=99.75 E-value=4.3e-17 Score=126.26 Aligned_cols=110 Identities=17% Similarity=0.222 Sum_probs=98.1
Q ss_pred EEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEE
Q 022737 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEID 182 (293)
Q Consensus 103 f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~ 182 (293)
|+.++.|+++|+|.+||+++..|++|+++++..++.. .|++.. .+...+.+|++.+.+++|.+|+.+||+|+++
T Consensus 1 ~~~~~~v~~~d~d~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~i~v~ 74 (110)
T cd00586 1 FTLEIRVRFGDTDAAGHVNNARYLRYFEEAREEFLRE-----LGLGYD-ELEEQGLGLVVVELEIDYLRPLRLGDRLTVE 74 (110)
T ss_pred CcEEEEEEEhhcCCCCEEchhHHHHHHHHHHHHHHHH-----cCCCHH-HHHhCCceEEEEEeEeeEcCccCCCCEEEEE
Confidence 4678999999999999999999999999999988642 344332 3467899999999999999999999999999
Q ss_pred EEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEEEe
Q 022737 183 TWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMN 219 (293)
Q Consensus 183 T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~vD 219 (293)
+|+.+.++.++.+.+.+++ ++|++++++.+.|+++|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~-~~g~~~a~~~~~~~~~d 110 (110)
T cd00586 75 TRVLRLGRKSFTFEQEIFR-EDGELLATAETVLVCVD 110 (110)
T ss_pred EEEEecCcEEEEEEEEEEC-CCCeEEEEEEEEEEEeC
Confidence 9999999999999999997 57999999999999987
No 11
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=99.57 E-value=1.5e-14 Score=133.02 Aligned_cols=132 Identities=14% Similarity=0.192 Sum_probs=90.8
Q ss_pred hhcccccccccccccccCCCccccccccc--------c------ccc---ccCCceEEEEEEeeecCCCCCCCcCHHHHH
Q 022737 64 AAEKEGCRINEVQIRQNIPTKKQFVDPYR--------H------GLI---IEGGVGYRQTVVVRSYEVGPDKTATLESIL 126 (293)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~------~~~---~~~~~~f~~~~~VR~~D~D~~GhV~~~~yl 126 (293)
.|.|.|+++|.++||+. +++++++++|. . .++ ......+..+++||++|+|.||||||..|+
T Consensus 111 ~a~s~WvliD~~trr~~-ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vr~sDiD~N~HVNN~~Yl 189 (261)
T PF01643_consen 111 RATSIWVLIDLETRRPV-RIPEEIIEEYGPFFPDELPEEDIRKLPKIPKNPPEEPEFEKEFTVRYSDIDMNGHVNNARYL 189 (261)
T ss_dssp EEEEEEEEEETTT-SEE----GGCTCCGGGGB----T-EESSS----------TTSECEEEE--GGGEETTTCE-HHHHH
T ss_pred EEEEEEEEEEhhhCCcc-cCCHHHHhhhhhhcccccccccccccccccccCChhhheeecccccHHHCCCCCCcCHHHHH
Confidence 56789999999999998 66666676663 1 222 134567889999999999999999999999
Q ss_pred HHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEEEEEeee-CCcEEEEEEEEEEcCCC
Q 022737 127 NLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGAS-GKNGMRRDWLIRSQATG 205 (293)
Q Consensus 127 ~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~-~~~~~~R~f~I~d~~~G 205 (293)
+|+.|+....+ +. ...+.++.|.|.++..+||.|.+.+.+... ......-.|.|++ ++|
T Consensus 190 ~w~~d~lp~~~---------------~~----~~~~~~i~I~y~~E~~~gd~i~~~~~~~~~~~~~~~~~~h~i~~-~~g 249 (261)
T PF01643_consen 190 DWALDALPEEF---------------LE----KYQIKSIDINYKKEIRYGDTITSYTEVEKDEEEDGLSTLHEIRN-EDG 249 (261)
T ss_dssp HHHHCCS-HHH---------------HC----CEEEEEEEEEE-S--BTT-EEEEEEEEEEECCTTEEEEEEEEEC-T-T
T ss_pred HHHHHhCcchh---------------hc----cCCcEEEEEEEccccCCCCEEEEEEEEcccccCCceEEEEEEEc-CCC
Confidence 99999754321 11 456789999999999999999999987543 3334445588997 569
Q ss_pred cEEEEEEEEEE
Q 022737 206 HIFARATSTWV 216 (293)
Q Consensus 206 elia~a~s~wV 216 (293)
+.++++.+.|-
T Consensus 250 ~~~~~~~~~W~ 260 (261)
T PF01643_consen 250 EEVARARTEWQ 260 (261)
T ss_dssp CEEEEEEEEEE
T ss_pred ceEEEEEEEEc
Confidence 99999999993
No 12
>PLN02370 acyl-ACP thioesterase
Probab=99.44 E-value=5.2e-13 Score=129.91 Aligned_cols=134 Identities=16% Similarity=0.175 Sum_probs=96.5
Q ss_pred hhcccccccccccccccCCCcccc---cccccc----------ccccc-CCc---eEEEEEEeeecCCCCCCCcCHHHHH
Q 022737 64 AAEKEGCRINEVQIRQNIPTKKQF---VDPYRH----------GLIIE-GGV---GYRQTVVVRSYEVGPDKTATLESIL 126 (293)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----------~~~~~-~~~---~f~~~~~VR~~D~D~~GhV~~~~yl 126 (293)
.|+|.|+++|.++||+. ++++++ +++|.. +|+.. +.. .....++|||+|+|.||||||..|+
T Consensus 247 ~A~SvWV~mD~~TRRpv-RIP~Evr~~i~~y~~~~~~~i~~~~~kl~~l~~~~~~~~~~~~~VRysDLD~NgHVNNvkYi 325 (419)
T PLN02370 247 RASSVWVMMNKLTRRLS-KIPEEVRGEIEPYFLNSDPVVNEDSRKLPKLDDKTADYIRKGLTPRWSDLDVNQHVNNVKYI 325 (419)
T ss_pred EEEEEEEEEECCCCccc-CCCHHHHHhhhhcccccccccccccccCCccccccccceeeeeeecHHHCcccCccccHHHH
Confidence 67889999999999998 666665 666642 33331 111 2345599999999999999999999
Q ss_pred HHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEEEEEee--eCC---cE-EEEEEEEE
Q 022737 127 NLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGA--SGK---NG-MRRDWLIR 200 (293)
Q Consensus 127 ~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~T~v~~--~~~---~~-~~R~f~I~ 200 (293)
+|+.|+....+ +. ...+.+++|+|+++..+||.|.+.+.+.+ .+. .. ....+.+.
T Consensus 326 ~Wild~lP~e~---------------l~----~~~l~~i~I~Y~kE~~~gd~V~s~~~~~~~~~~~~~~~~~~~~~h~~~ 386 (419)
T PLN02370 326 GWILESAPPPI---------------ME----SHELAAITLEYRRECGRDSVLQSLTAVSGTGIGNLGTAGDVECQHLLR 386 (419)
T ss_pred HHHHhhCchhh---------------hh----cceEEEEEEEEcccCCCCCEEEEEEeecccccccccCCCcceEEEEEE
Confidence 99999754221 22 33578999999999999999998877531 111 11 11224444
Q ss_pred EcCCCcEEEEEEEEEEEE
Q 022737 201 SQATGHIFARATSTWVMM 218 (293)
Q Consensus 201 d~~~Gelia~a~s~wV~v 218 (293)
. ++|+.++++.+.|---
T Consensus 387 ~-~dG~e~a~a~t~Wr~~ 403 (419)
T PLN02370 387 L-EDGAEIVRGRTEWRPK 403 (419)
T ss_pred c-CCCeEEEEEEEEEEEC
Confidence 3 7899999999999754
No 13
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=99.41 E-value=1.4e-11 Score=98.77 Aligned_cols=113 Identities=15% Similarity=0.162 Sum_probs=93.6
Q ss_pred ceEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEe-EEEEcccCCCCCEE
Q 022737 101 VGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRM-QVEIDHYPIWGEVV 179 (293)
Q Consensus 101 ~~f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~-~I~y~r~p~~gD~V 179 (293)
..+...++|++.++|+.|+++...|+.|+++++..++. .. ... ..+.... +++|.+|..+||.|
T Consensus 6 ~~~~~~~~v~~~~~d~~g~v~~g~~~~~~d~a~~~~~~-------~~------~~~--~~~~~~~~~~~f~~p~~~gd~l 70 (123)
T cd03442 6 TELSTRELVLPEDTNHHGTIFGGWLLEWMDELAGIAAY-------RH------AGG--RVVTASVDRIDFLKPVRVGDVV 70 (123)
T ss_pred cceEEEEEeCCcccCcCCcEeHHHHHHHHHHHHHHHHH-------HH------hCC--cEEEEEECceEEcCccccCcEE
Confidence 35678899999999999999999999999999876531 11 111 2334445 79999999999999
Q ss_pred EEEEEEeeeCCcEEEEEEEEEEcC----CCcEEEEEEEEEEEEeccCCccccCC
Q 022737 180 EIDTWVGASGKNGMRRDWLIRSQA----TGHIFARATSTWVMMNQQTRRLSKIP 229 (293)
Q Consensus 180 ~I~T~v~~~~~~~~~R~f~I~d~~----~Gelia~a~s~wV~vD~~trRpvriP 229 (293)
.+++++...++.++..++.+++.+ +++++++|..++|++| .++||.++|
T Consensus 71 ~i~~~v~~~g~~~~~~~~~i~~~~~~~~~~~~~a~~~~~~v~~~-~~~~~~~~p 123 (123)
T cd03442 71 ELSARVVYTGRTSMEVGVEVEAEDPLTGERRLVTSAYFTFVALD-EDGKPRPVP 123 (123)
T ss_pred EEEEEEEEecCCeEEEEEEEEEecCCCCcEEEEEEEEEEEEEEC-CCCCeeeCC
Confidence 999999999999999999999732 3579999999999999 568999887
No 14
>COG3884 FatA Acyl-ACP thioesterase [Lipid metabolism]
Probab=99.24 E-value=1.7e-11 Score=109.32 Aligned_cols=125 Identities=11% Similarity=0.014 Sum_probs=96.9
Q ss_pred hhcccccccccccccccCCCcccccccccc----------cccc-cCCceEEEEEEeeecCCCCCCCcCHHHHHHHHHHH
Q 022737 64 AAEKEGCRINEVQIRQNIPTKKQFVDPYRH----------GLII-EGGVGYRQTVVVRSYEVGPDKTATLESILNLFQET 132 (293)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~~~f~~~~~VR~~D~D~~GhV~~~~yl~~~qea 132 (293)
.+++-|++||.+.||+. ...++++++|.+ +.+. .....+...|.||++|+|.+|||||+.|++|+.|.
T Consensus 104 e~~a~wilmn~dTrkp~-ri~~d~la~~~~t~~~k~~r~~~~l~~~~e~s~~~~f~vR~~DID~f~HvNNskY~~wi~e~ 182 (250)
T COG3884 104 EIEAFWILMNRDTRKPA-RITDDLLAPFNLTTEKKRLRWPKYLSSRLEASEIHDFPVRYTDIDMFGHVNNSKYWSWIEEV 182 (250)
T ss_pred EEEEEEEEEccccccce-eccHHHhhhhcccchhheeccccccCccccccccccceeEEEeeccccccccceehHHHHHH
Confidence 45569999999999998 788999999877 1111 23346777899999999999999999999999998
Q ss_pred HHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEE
Q 022737 133 ALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARAT 212 (293)
Q Consensus 133 a~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~ 212 (293)
...|+. . ..-..++.++|.+|..+||+|+|.+.+...+.. +.+. .+|.+.+.+-
T Consensus 183 l~~~~~---------------~----~~~p~r~~l~y~keva~G~~iti~~e~~~~~s~-----~~f~--~d~~v~~lt~ 236 (250)
T COG3884 183 LGSEFL---------------K----LYGPLRLTLEYVKEVAPGEKITIVYEVHPLESK-----HQFT--SDGQVNALTY 236 (250)
T ss_pred HhhhhH---------------h----hcccceeEEEEEcccCCCCeEEEEEEEcccCce-----eeec--CCcceEEEEE
Confidence 776531 1 122358899999999999999999998766553 2232 4777777776
Q ss_pred EEE
Q 022737 213 STW 215 (293)
Q Consensus 213 s~w 215 (293)
.+|
T Consensus 237 i~~ 239 (250)
T COG3884 237 IVG 239 (250)
T ss_pred EEe
Confidence 666
No 15
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=99.02 E-value=1.3e-08 Score=73.74 Aligned_cols=98 Identities=18% Similarity=0.172 Sum_probs=85.5
Q ss_pred EEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEEE
Q 022737 104 RQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDT 183 (293)
Q Consensus 104 ~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~T 183 (293)
...++|++.|+|.++++++..++.++++++..++. ..+ ..+..+++.+.+++|.+|+..||.|.+++
T Consensus 2 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~------~~~~~~~~~~~~~~~~~~~~~g~~v~~~~ 68 (100)
T cd03440 2 VLRLTVTPEDIDGGGIVHGGLLLALADEAAGAAAA-------RLG------GRGLGAVTLSLDVRFLRPVRPGDTLTVEA 68 (100)
T ss_pred EEEEEeCHHHcCcCCccchHHHHHHHHHHHHHHHH-------Hhc------cCCCeEEEEEEEeEEecCCCCCCEEEEEE
Confidence 35789999999999999999999999999998752 111 15679999999999999999999999999
Q ss_pred EEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEE
Q 022737 184 WVGASGKNGMRRDWLIRSQATGHIFARATSTW 215 (293)
Q Consensus 184 ~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~w 215 (293)
++...++..+.....+.+ ++|++++.+...+
T Consensus 69 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 99 (100)
T cd03440 69 EVVRVGRSSVTVEVEVRN-EDGKLVATATATF 99 (100)
T ss_pred EEEeccccEEEEEEEEEC-CCCCEEEEEEEEe
Confidence 999999988888888886 5799999997765
No 16
>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....
Probab=98.92 E-value=4.2e-08 Score=72.40 Aligned_cols=79 Identities=15% Similarity=0.145 Sum_probs=67.9
Q ss_pred CCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEE
Q 022737 117 DKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRD 196 (293)
Q Consensus 117 ~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~ 196 (293)
+|+|+++.|+.|+++++..++.. ....+...++.+.+++|.+|++.||.|++++++.+.++.++..+
T Consensus 1 ~G~v~~g~~~~~~d~a~~~~~~~-------------~~~~~~~~~~~~~~i~f~~p~~~gd~l~~~~~v~~~g~~~~~~~ 67 (79)
T PF03061_consen 1 NGIVHGGVYLSLFDEAASAALRS-------------HGGDGRGVVTVELSIDFLRPVRPGDTLRVEARVVRVGRKSFTVE 67 (79)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHH-------------HHSSTEEEEEEEEEEEESS-BBTTSEEEEEEEEEEEESSEEEEE
T ss_pred CCEEhHHHHHHHHHHHHHHHHHH-------------hccCCcceEEEEEEEEEccccCCCeEEEEEEEEEEECCEEEEEE
Confidence 69999999999999999877531 11115699999999999999999999999999999999999999
Q ss_pred EEEEEcCCCcEEE
Q 022737 197 WLIRSQATGHIFA 209 (293)
Q Consensus 197 f~I~d~~~Gelia 209 (293)
+++++ ++++++|
T Consensus 68 ~~v~~-~~~~~~~ 79 (79)
T PF03061_consen 68 VEVYS-EDGRLCA 79 (79)
T ss_dssp EEEEE-TTSCEEE
T ss_pred EEEEE-CCCcEEC
Confidence 99998 7777765
No 17
>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).
Probab=98.71 E-value=6.8e-07 Score=70.37 Aligned_cols=102 Identities=13% Similarity=0.029 Sum_probs=86.8
Q ss_pred CceEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEE
Q 022737 100 GVGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVV 179 (293)
Q Consensus 100 ~~~f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V 179 (293)
+...+..+++...++|..|+++...++.+++.++...+.. ....+...++.+++++|.+|+.. +.|
T Consensus 11 ~~~~~~~~~~~~~~~n~~g~vhgg~l~~l~d~a~~~~~~~-------------~~~~~~~~~~~~~~i~f~~p~~~-~~v 76 (113)
T cd03443 11 PGRVVLRLPVRPRHLNPGGIVHGGAIATLADTAGGLAALS-------------ALPPGALAVTVDLNVNYLRPARG-GDL 76 (113)
T ss_pred CCeEEEEeeCcHhhcCCCCeEeHHHHHHHHHHHHHHHHhh-------------ccCCCCceEEEEEEEeEEcCCCC-CeE
Confidence 3456778999999999999999999999999998765320 01134577889999999999999 999
Q ss_pred EEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEE
Q 022737 180 EIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (293)
Q Consensus 180 ~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (293)
.+++++.+.++.....+..+++ ++|+++++|..+|+
T Consensus 77 ~~~~~v~~~g~~~~~~~~~~~~-~~~~~~a~a~~~~~ 112 (113)
T cd03443 77 TARARVVKLGRRLAVVEVEVTD-EDGKLVATARGTFA 112 (113)
T ss_pred EEEEEEEecCceEEEEEEEEEC-CCCCEEEEEEEEEe
Confidence 9999999999998888899996 56999999999886
No 18
>PRK10694 acyl-CoA esterase; Provisional
Probab=98.48 E-value=6.5e-06 Score=68.58 Aligned_cols=112 Identities=10% Similarity=0.012 Sum_probs=88.3
Q ss_pred EEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEe-EEEEcccCCCCCEEEE
Q 022737 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRM-QVEIDHYPIWGEVVEI 181 (293)
Q Consensus 103 f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~-~I~y~r~p~~gD~V~I 181 (293)
....+.|...|++..|.+.=..++.|+.+++.-.+. .-.+-.++.++. .++|.+|.+.||.|++
T Consensus 12 ~~~~~~v~p~~~N~~g~lfGG~ll~~~D~~a~i~a~---------------~~~~~~~vtv~vd~i~F~~Pv~~Gd~l~~ 76 (133)
T PRK10694 12 LVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAK---------------EIAHGRVVTVRVEGMTFLRPVAVGDVVCC 76 (133)
T ss_pred eEEEEEcChhhcCCCCcEeHHHHHHHHHHHHHHHHH---------------HHcCCceEEEEECceEECCCcccCcEEEE
Confidence 345678999999999999999999999998764431 111224677777 6799999999999999
Q ss_pred EEEEeeeCCcEEEEEEEEEEc---C--CC--cEEEEEEEEEEEEeccCCccccCCH
Q 022737 182 DTWVGASGKNGMRRDWLIRSQ---A--TG--HIFARATSTWVMMNQQTRRLSKIPA 230 (293)
Q Consensus 182 ~T~v~~~~~~~~~R~f~I~d~---~--~G--elia~a~s~wV~vD~~trRpvriP~ 230 (293)
++++...++.++.-+.+++.. . .| ...+.+..++|.+| +.+||.++|+
T Consensus 77 ~a~V~~~g~sS~~v~v~v~~~~~~~~~~g~~~~~~~~~~tfVavd-~~g~p~~vp~ 131 (133)
T PRK10694 77 YARCVKTGTTSISINIEVWVKKVASEPIGQRYKATEALFTYVAVD-PEGKPRALPV 131 (133)
T ss_pred EEEEEEccCceEEEEEEEEEeecccCCCCcEEEEEEEEEEEEEEC-CCCCEEeCCC
Confidence 999999999999877777631 1 12 34677888899998 5789999985
No 19
>COG1607 Acyl-CoA hydrolase [Lipid metabolism]
Probab=98.09 E-value=0.00019 Score=61.44 Aligned_cols=114 Identities=15% Similarity=0.126 Sum_probs=87.6
Q ss_pred EEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEEE
Q 022737 104 RQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDT 183 (293)
Q Consensus 104 ~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~T 183 (293)
.....+-..|++++|.+.=..+|.|+.+++.--+. . ...|..--+.==.++|.+|++.||.|.+.+
T Consensus 15 ~~~~lv~P~dtN~~g~ifGG~lm~~mD~~a~i~A~--~------------~a~~~vVTasvd~v~F~~Pv~vGd~v~~~a 80 (157)
T COG1607 15 VLRTLVMPSDTNPNGTIFGGWLLSWMDLAAAIAAS--R------------HAGGRVVTASVDSVDFKKPVRVGDIVCLYA 80 (157)
T ss_pred EEEEEecCCccCcccccccHHHHHHHHHHHHHHHH--H------------HhCCeEEEEEeceEEEccccccCcEEEEEE
Confidence 36688999999999999999999999998765431 0 111212222223799999999999999999
Q ss_pred EEeeeCCcEEEEEEEEEE----cCCCcEEEEEEEEEEEEeccCCccccCCHHH
Q 022737 184 WVGASGKNGMRRDWLIRS----QATGHIFARATSTWVMMNQQTRRLSKIPAEV 232 (293)
Q Consensus 184 ~v~~~~~~~~~R~f~I~d----~~~Gelia~a~s~wV~vD~~trRpvriP~ev 232 (293)
++...|+.++.-.-+++. ....+..+.+..++|-+|-+ |||.++|++.
T Consensus 81 ~v~~~GrTSm~V~Vev~~~~~~~~~~~~~t~~~ft~VAvd~~-gkP~~vp~~~ 132 (157)
T COG1607 81 RVVYTGRTSMEVGVEVWAEDIRSGERRLATSAYFTFVAVDED-GKPTPVPREE 132 (157)
T ss_pred EEeecCcccEEEEEEEEEecccCCcceEeeeEEEEEEEECCC-CCcccCCccC
Confidence 999999999987766654 12335667888899999965 9999999755
No 20
>TIGR02286 PaaD phenylacetic acid degradation protein PaaD. Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway.
Probab=97.77 E-value=0.0013 Score=52.60 Aligned_cols=97 Identities=15% Similarity=0.036 Sum_probs=78.8
Q ss_pred EEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEEE
Q 022737 104 RQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDT 183 (293)
Q Consensus 104 ~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~T 183 (293)
...+.++-..+++.|.++=..++.++..+....+ .- . +..-+....+++|.+|++.||.|.++.
T Consensus 17 ~~~l~~~~~~~n~~g~~HGG~i~al~D~~~~~~~--------~~------~--~~~~~t~~~~i~f~rp~~~G~~l~~~a 80 (114)
T TIGR02286 17 RVAMTVRADMLNGHGTAHGGFLFSLADSAFAYAC--------NS------Y--GDAAVAAQCTIDFLRPGRAGERLEAEA 80 (114)
T ss_pred EEEEECCHHHcCcCCCchHHHHHHHHHHHHHHHh--------cC------C--CCceEEEEEEEEEecCCCCCCEEEEEE
Confidence 4478888899999999999999999998854321 00 0 112346788999999999999999999
Q ss_pred EEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEE
Q 022737 184 WVGASGKNGMRRDWLIRSQATGHIFARATSTWVM 217 (293)
Q Consensus 184 ~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~ 217 (293)
++.+.++.....+-++++ ++|+++|.++.+|..
T Consensus 81 ~v~~~g~~~~~~~~~i~~-~~~~~va~~~~t~~~ 113 (114)
T TIGR02286 81 VEVSRGGRTGTYDVEVVN-QEGELVALFRGTSRR 113 (114)
T ss_pred EEEEeCCcEEEEEEEEEc-CCCCEEEEEEEEEEE
Confidence 999998887777788997 789999999999864
No 21
>TIGR00369 unchar_dom_1 uncharacterized domain 1. Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown.
Probab=97.73 E-value=0.0013 Score=52.68 Aligned_cols=99 Identities=13% Similarity=-0.021 Sum_probs=80.0
Q ss_pred EEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEE
Q 022737 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEID 182 (293)
Q Consensus 103 f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~ 182 (293)
-+..+.++...+++.|.++=..++.+++.+...... . ....+...+-++.+++|.+|++-| .|+++
T Consensus 18 ~~~~~~v~~~~~n~~g~vhGG~l~~l~D~a~~~a~~--------~-----~~~~~~~~vt~~l~i~f~~p~~~g-~l~a~ 83 (117)
T TIGR00369 18 LEATMPVDERTLQPFGSLHGGVSAALADTAGSAAGY--------L-----CNSGGQAVVGLELNANHLRPAREG-KVRAI 83 (117)
T ss_pred EEEEEEcCHHHcCCcccChHHHHHHHHHHHHHHHHH--------h-----hcCCCceEEEEEEEeeeccccCCC-EEEEE
Confidence 366788999999999999999999998877632210 0 112233567779999999999999 99999
Q ss_pred EEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEE
Q 022737 183 TWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (293)
Q Consensus 183 T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (293)
.++.+.++.....+-+++| ++|+++++++.++.
T Consensus 84 a~v~~~gr~~~~~~~~i~~-~~g~~va~~~~t~~ 116 (117)
T TIGR00369 84 AQVVHLGRQTGVAEIEIVD-EQGRLCALSRGTTA 116 (117)
T ss_pred EEEEecCceEEEEEEEEEC-CCCCEEEEEEEEEc
Confidence 9999999998888889997 78999999998864
No 22
>PF12590 Acyl-thio_N: Acyl-ATP thioesterase; InterPro: IPR021113 This entry represents the N-terminal domain of acyl-ATP thioesterases from bacteria and eukaryotes. These proteins are typically between 120 and 131 amino acids in length. The plant acyl-acyl carrier protein (ACP) thioesterases (TEs) play an essential role in chain termination during de novo fatty acid synthesis [].; GO: 0016790 thiolester hydrolase activity
Probab=97.71 E-value=3.9e-06 Score=68.15 Aligned_cols=28 Identities=25% Similarity=0.121 Sum_probs=26.0
Q ss_pred ccccccceeeeeehhhhccccccccccccc
Q 022737 49 HSQTTGVASTFVASVAAEKEGCRINEVQIR 78 (293)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (293)
-||.+.++||||. +||+||+|+|||.||
T Consensus 96 WSMLLAAITTIFl--AAEKQW~mLDwKpkR 123 (129)
T PF12590_consen 96 WSMLLAAITTIFL--AAEKQWTMLDWKPKR 123 (129)
T ss_pred HHHHHHHHHHHHH--HhhhhhhhhcccCCC
Confidence 3788899999998 999999999999999
No 23
>PLN02647 acyl-CoA thioesterase
Probab=97.43 E-value=0.0022 Score=63.42 Aligned_cols=116 Identities=12% Similarity=0.062 Sum_probs=84.9
Q ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeE-eEEEEcccCCCCCEEEEEEEEe
Q 022737 108 VVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSR-MQVEIDHYPIWGEVVEIDTWVG 186 (293)
Q Consensus 108 ~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r-~~I~y~r~p~~gD~V~I~T~v~ 186 (293)
.++-.+.++.|++.-..+|.|+.+++..-+.. ...+- +.....+..|-+. -+|+|.+|++.||.|.+...+.
T Consensus 99 ~l~~~y~N~~G~l~gG~LLe~mD~~A~~~A~r---h~~~~----~~~~~p~~vVTAsVD~i~F~~Pi~~g~~v~l~g~Vt 171 (437)
T PLN02647 99 ILREQYRNPWNEVRIGKLLEDLDALAGTISVK---HCSDD----DSTTRPLLLVTASVDKIVLKKPIRVDVDLKIVGAVT 171 (437)
T ss_pred hhchhhcCCCCcEeHhHHHHHHHHHHHHHHHH---HhCCC----cccCCcceEEEEEECcEEEcCCCcCCcEEEEEEEEE
Confidence 56777799999999999999999987654310 00010 0111122233333 3789999999999999999999
Q ss_pred eeCCcEEEEEEEEEEcC------CCcEEEEEEEEEEEEeccCCccccCCH
Q 022737 187 ASGKNGMRRDWLIRSQA------TGHIFARATSTWVMMNQQTRRLSKIPA 230 (293)
Q Consensus 187 ~~~~~~~~R~f~I~d~~------~Gelia~a~s~wV~vD~~trRpvriP~ 230 (293)
..|+.++.-.-.++... ...++++|..++|.+|.+++||.++|+
T Consensus 172 ~vGrSSMEV~v~V~~~~~~~~~~~~~~~~~a~FtfVA~D~~~gkp~pVp~ 221 (437)
T PLN02647 172 WVGRSSMEIQLEVIQPTKDESNTSDSVALTANFTFVARDSKTGKSAPVNR 221 (437)
T ss_pred EecCCeEEEEEEEEEccccCCCCcEEEEEEEEEEEEEEcCCCCCeeeCCC
Confidence 99999998766676411 234788999999999987899999875
No 24
>PRK10293 acyl-CoA esterase; Provisional
Probab=97.26 E-value=0.015 Score=48.49 Aligned_cols=101 Identities=12% Similarity=-0.080 Sum_probs=81.6
Q ss_pred EEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEE
Q 022737 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEID 182 (293)
Q Consensus 103 f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~ 182 (293)
-+.++.|+-..+.+.|.++=..++.+++.+..... +. ....+...+-.+.+++|.+|.+-| .|..+
T Consensus 36 ~~~~~~v~~~~~n~~G~lHGGv~~tLaD~a~~~a~---------~~----~~~~~~~~vTiel~infl~p~~~g-~l~a~ 101 (136)
T PRK10293 36 LEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAG---------YL----CTEGEQKVVGLEINANHVRSAREG-RVRGV 101 (136)
T ss_pred EEEEEEcCHHHcCCcCcccHHHHHHHHHHHHHHHH---------Hh----cccCCceEEEEEEEeEEecccCCc-eEEEE
Confidence 35567888888999999999999999976643321 10 112344678889999999999877 69999
Q ss_pred EEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEEE
Q 022737 183 TWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMM 218 (293)
Q Consensus 183 T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~v 218 (293)
.++.+.|+.....+-+++| ++|++++.++.+|.++
T Consensus 102 a~vv~~Gr~~~~~~~~v~d-~~g~l~A~~~~t~~i~ 136 (136)
T PRK10293 102 CKPLHLGSRHQVWQIEIFD-EKGRLCCSSRLTTAIL 136 (136)
T ss_pred EEEEecCCCEEEEEEEEEe-CCCCEEEEEEEEEEEC
Confidence 9999999998888899998 7999999999998764
No 25
>PRK10254 thioesterase; Provisional
Probab=97.08 E-value=0.043 Score=45.91 Aligned_cols=102 Identities=10% Similarity=-0.054 Sum_probs=83.0
Q ss_pred eEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEE
Q 022737 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (293)
Q Consensus 102 ~f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I 181 (293)
.-+.++.|+...+.+.|.++=..++.+++.+....+. .....+...+-.+.+++|.+|.+-| .|..
T Consensus 35 ~~~~~l~v~~~~~n~~G~vHGGv~~tLaD~a~g~A~~-------------~~~~~g~~~vTiel~in~Lrp~~~g-~l~a 100 (137)
T PRK10254 35 VLEAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGF-------------LMTRDGQCVVGTELNATHHRPVSEG-KVRG 100 (137)
T ss_pred EEEEEEEcCccccCCCCcchHHHHHHHHHHHHHHHHH-------------hhCCCCCeEEEEEEEeEEeccCcCC-eEEE
Confidence 3455678888889999999999999999887543311 0123456788999999999999876 7999
Q ss_pred EEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEEE
Q 022737 182 DTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMM 218 (293)
Q Consensus 182 ~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~v 218 (293)
+..+.+.|+.....+-+|+| ++|++++.++.+..++
T Consensus 101 ~a~vi~~Gr~~~v~~~~v~d-~~g~l~a~~~~t~~i~ 136 (137)
T PRK10254 101 VCQPLHLGRQNQSWEIVVFD-EQGRRCCTCRLGTAVL 136 (137)
T ss_pred EEEEEecCcCEEEEEEEEEc-CCCCEEEEEEEEEEEe
Confidence 99999999998888899998 8999999999887664
No 26
>PRK11688 hypothetical protein; Provisional
Probab=96.84 E-value=0.049 Score=46.03 Aligned_cols=111 Identities=13% Similarity=0.057 Sum_probs=77.3
Q ss_pred EEEEEEeeecCCC--CCCCcCHHHHHHHHHHHHHHhHHhhccccCCC-Ccch-hhhcCCeeEEEeEeEEEEcccCCCCCE
Q 022737 103 YRQTVVVRSYEVG--PDKTATLESILNLFQETALNHVWMSGLLSNGF-GATH-GMMRNNLIWVVSRMQVEIDHYPIWGEV 178 (293)
Q Consensus 103 f~~~~~VR~~D~D--~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~-g~~~-~l~~~g~~wVV~r~~I~y~r~p~~gD~ 178 (293)
-...++++-..++ +.|.++=..++.+++.+...-+.. ... .+. +..+ ...+.....+-++++++|.+|.+ |+.
T Consensus 39 ~~~~l~~~~~~~~n~~~G~vHGG~i~tl~D~a~g~a~~~-~~~-~~~~~~~~~~~~~~~~~~vTi~l~i~fl~p~~-g~~ 115 (154)
T PRK11688 39 VELSFKMQPELVGNIAQSILHGGVIASVLDVAGGLVCVG-GIL-ARHEDISEEELRQRLSRLGTIDLRVDYLRPGR-GER 115 (154)
T ss_pred EEEEeeCCHHHcCCCCcCeeeHHHHHHHHHHHHHHHHHh-hcc-cccccccccccccccccceEEEEEEEeeccCC-CCe
Confidence 3456677777785 579999999999888776543211 000 000 0000 00011123456799999999996 999
Q ss_pred EEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEE
Q 022737 179 VEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVM 217 (293)
Q Consensus 179 V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~ 217 (293)
|.++.++.+.++.....+-+|++ ++|+++|+++.+|..
T Consensus 116 l~a~a~v~~~g~r~~~~~~~i~~-~~g~lvA~a~~t~~v 153 (154)
T PRK11688 116 FTATSSVLRAGNKVAVARMELHN-EQGVHIASGTATYLV 153 (154)
T ss_pred EEEEEEEEEccCCEEEEEEEEEC-CCCCEEEEEEEEEEe
Confidence 99999999999888777789997 789999999998864
No 27
>COG2050 PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.77 E-value=0.062 Score=44.59 Aligned_cols=105 Identities=14% Similarity=0.089 Sum_probs=83.7
Q ss_pred eEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEE
Q 022737 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (293)
Q Consensus 102 ~f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I 181 (293)
.-+..+.+.-....+.|.++=..++.+++.+....... - ...+..-+-+..+++|.||.+-|+ |+.
T Consensus 35 ~~~~~l~~~~~~~~~~G~~HGG~i~alaD~a~~~a~~~------~-------~~~~~~~~ti~l~i~flr~~~~g~-v~a 100 (141)
T COG2050 35 EAEATLPVDPELLNPGGILHGGVIAALADSAAGLAANS------L-------LGVVALAVTLELNINFLRPVKEGD-VTA 100 (141)
T ss_pred eEEEEeecCHHHcCCCceeeHHHHHHHHHHHHHHHHhh------c-------cCccceeEEEEEEehhccCCCCCe-EEE
Confidence 34556788888888999999999999999887654321 1 111112367899999999999999 999
Q ss_pred EEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEEEec
Q 022737 182 DTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQ 220 (293)
Q Consensus 182 ~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~ 220 (293)
+..+.+.|+.....+.++++.+.|+++|.++.++..++.
T Consensus 101 ~a~v~~~G~~~~v~~i~v~~~~~~~lva~~~~t~~v~~~ 139 (141)
T COG2050 101 EARVLHLGRRVAVVEIEVKNDEGGRLVAKGTGTYAVLRK 139 (141)
T ss_pred EEEEEeeCCEEEEEEEEEEECCCCeEEEEEEEEEEEecC
Confidence 999999999988888999964667999999999998864
No 28
>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.
Probab=96.64 E-value=0.03 Score=44.74 Aligned_cols=56 Identities=7% Similarity=0.029 Sum_probs=46.4
Q ss_pred eEEEeEeEEEEcccCCCCCEEEEEEEEeeeCC--cEEEEEEEEEEcCCCcEEEEEEEEE
Q 022737 159 IWVVSRMQVEIDHYPIWGEVVEIDTWVGASGK--NGMRRDWLIRSQATGHIFARATSTW 215 (293)
Q Consensus 159 ~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~--~~~~R~f~I~d~~~Gelia~a~s~w 215 (293)
+.+....+++|.+|...||+|.++.++..... ..+..+..+.+ ++|+++++|+.+.
T Consensus 69 ~~~~~~~~~~f~~Pv~~gd~l~~~~~v~~~~~~~~~v~~~~~~~~-~~g~~v~~g~~~~ 126 (128)
T cd03449 69 GTIYLSQSLRFLRPVFIGDTVTATVTVTEKREDKKRVTLETVCTN-QNGEVVIEGEAVV 126 (128)
T ss_pred eEEEEEEEEEECCCccCCCEEEEEEEEEEEecCCCEEEEEEEEEe-CCCCEEEEEEEEE
Confidence 55667899999999999999999999987654 55666778887 6899999998764
No 29
>COG5496 Predicted thioesterase [General function prediction only]
Probab=96.48 E-value=0.18 Score=41.64 Aligned_cols=109 Identities=14% Similarity=0.161 Sum_probs=83.7
Q ss_pred CCceEEEEEEeeecCCCCC-------CCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcc
Q 022737 99 GGVGYRQTVVVRSYEVGPD-------KTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDH 171 (293)
Q Consensus 99 ~~~~f~~~~~VR~~D~D~~-------GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r 171 (293)
.+..++.++.|+-.++++- ..+--+.++.||+.|+.+.+. ...+.|.+-|-++..++=..
T Consensus 3 ~g~~~e~~~lv~dn~t~~~~~~~~~~~VlATp~mi~~~E~a~~el~~-------------~~Ld~g~ttVG~ev~vrHla 69 (130)
T COG5496 3 DGLTLEGEFLVRDNHTVPPAEGSGMLNVLATPAMIGFMENASYELLQ-------------PYLDNGETTVGTEVLVRHLA 69 (130)
T ss_pred CceeeEEEEEecccccCchhHhCCccceeehHHHHHHHHHHHHHHHH-------------hhCcCCcceeeEEEEeeecc
Confidence 4567888888888888732 233445677788888766531 12345778999999999999
Q ss_pred cCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEEEeccC
Q 022737 172 YPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQT 222 (293)
Q Consensus 172 ~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~t 222 (293)
+.-.|..|.|.+.+.++.+.... |.|+-.++|+.+.+|+-+-+.+|.++
T Consensus 70 ~~~~G~~V~i~~~l~~v~Gr~v~--f~i~a~~~~~~Ig~g~h~R~iv~~~k 118 (130)
T COG5496 70 ATPPGLTVTIGARLEKVEGRKVK--FRIIAMEGGDKIGEGTHTRVIVPREK 118 (130)
T ss_pred CCCCCCeEEEEEEEEEEeccEEE--EEEEEeeCCcEEeeeEEEEEEecHHH
Confidence 99999999999999998877776 44443368999999999999998764
No 30
>KOG3328 consensus HGG motif-containing thioesterase [General function prediction only]
Probab=96.20 E-value=0.076 Score=44.92 Aligned_cols=101 Identities=21% Similarity=0.089 Sum_probs=81.4
Q ss_pred EEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEE
Q 022737 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEID 182 (293)
Q Consensus 103 f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~ 182 (293)
-+-+++|.-..++++|.++...-..+.+.....-+ + +.+....-|-+.+++.|..+...||.|.|+
T Consensus 39 v~ce~kV~~~~~N~~k~LHGG~tAtLvD~i~s~~~--------~------~~~~~~~gvsvdLsvsyL~~AklGe~l~i~ 104 (148)
T KOG3328|consen 39 VSCELKVTPDHLNRFKTLHGGATATLVDLITSAAL--------L------MTSGFKPGVSVDLSVSYLSSAKLGEELEIE 104 (148)
T ss_pred EEEEEEeCHHHcCccccccccchhhHHHHHhhHHH--------H------hccCCCCceEEEEEhhhccccCCCCeEEEE
Confidence 45679999999999999999988888887665421 1 122222557789999999999999999999
Q ss_pred EEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEE
Q 022737 183 TWVGASGKNGMRRDWLIRSQATGHIFARATSTWVM 217 (293)
Q Consensus 183 T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~ 217 (293)
..+.+.|+.....+.+++...+|++++.++-+-.+
T Consensus 105 a~~vr~Gk~la~t~v~l~~K~t~kiia~grhtk~~ 139 (148)
T KOG3328|consen 105 ATVVRVGKTLAFTDVELRRKSTGKIIAKGRHTKYF 139 (148)
T ss_pred EEEeecCceEEEEEEEEEEcCCCeEEEecceEEEe
Confidence 99999999988888888887789999999765443
No 31
>PLN02322 acyl-CoA thioesterase
Probab=96.13 E-value=0.34 Score=41.43 Aligned_cols=104 Identities=10% Similarity=-0.080 Sum_probs=80.2
Q ss_pred eEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEE
Q 022737 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (293)
Q Consensus 102 ~f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I 181 (293)
..+.++.|+...+.+.|.++=..++.+++.+.. .+. . ....+...+-++++++|.+|.+.||.|..
T Consensus 27 ~~~~~m~v~~~~~N~~G~vHGGv~atLaDta~g-~A~--------~-----~~~~~~~~vTiel~infLrpa~~G~~L~A 92 (154)
T PLN02322 27 RVTGRLPVSPMCCQPFKVLHGGVSALIAESLAS-LGA--------H-----MASGFKRVAGIQLSINHLKSADLGDLVFA 92 (154)
T ss_pred EEEEEEECCHHHcCCCCCccHHHHHHHHHHHHH-HHH--------h-----hccCCCceEEEEEEEEEeccCCCCCEEEE
Confidence 345567788888999999999999999976543 210 0 01122256779999999999999999999
Q ss_pred EEEEeeeCCcEEEEEEEEEEc----C-CCcEEEEEEEEEEEEe
Q 022737 182 DTWVGASGKNGMRRDWLIRSQ----A-TGHIFARATSTWVMMN 219 (293)
Q Consensus 182 ~T~v~~~~~~~~~R~f~I~d~----~-~Gelia~a~s~wV~vD 219 (293)
+-.+.+.|+.....+-+|++. + +|++++.++.+..++.
T Consensus 93 ea~vv~~Gr~~~~~ev~V~~~~~~~~~~~~lva~a~~T~~~~~ 135 (154)
T PLN02322 93 EATPVSTGKTIQVWEVKLWKTTDKDKANKILISSSRVTLICNL 135 (154)
T ss_pred EEEEEecCCCEEEEEEEEEECCCCcccCCeEEEEEEEEEEEcc
Confidence 999999999988888889872 1 3789999998887653
No 32
>PLN02647 acyl-CoA thioesterase
Probab=95.54 E-value=0.44 Score=47.33 Aligned_cols=114 Identities=8% Similarity=0.018 Sum_probs=79.1
Q ss_pred EEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEE
Q 022737 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEID 182 (293)
Q Consensus 103 f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~ 182 (293)
-+....+...|.+.+|.+.=..+|.|+.|++.--+. .-..+..-.+.=-.++|.+|++.||.|.++
T Consensus 291 ~~~~~iv~P~d~N~~g~iFGG~LM~~~De~A~i~A~--------------r~a~~~~vt~svd~v~F~~PV~vGdil~l~ 356 (437)
T PLN02647 291 LENSLICQPQQRNIHGRIFGGFLMRRAFELAFSTAY--------------AFAGLRPYFLEVDHVDFLRPVDVGDFLRFK 356 (437)
T ss_pred eEEEEEeCccccCCCCcEeHHHHHHHHHHHHHHHHH--------------HHcCCceEEEEecceEecCccccCcEEEEE
Confidence 345577889999999999999999999988764321 111222333444589999999999999987
Q ss_pred EEEee-----eCCcEEEEEEE--EEE--cCCCcEEEEEEEEEEEEec-cCCccccCCH
Q 022737 183 TWVGA-----SGKNGMRRDWL--IRS--QATGHIFARATSTWVMMNQ-QTRRLSKIPA 230 (293)
Q Consensus 183 T~v~~-----~~~~~~~R~f~--I~d--~~~Gelia~a~s~wV~vD~-~trRpvriP~ 230 (293)
..+.. .++.++..+-. +.+ ..+++++..+..++|..|. .+++|+++|+
T Consensus 357 A~V~yt~~~s~g~~~i~veV~v~v~~~~~~~~~~~n~~~fTfva~d~~~~g~p~~Vp~ 414 (437)
T PLN02647 357 SCVLYTELENSEQPLINVEVVAHVTRPELRSSEVSNTFYFTFTVRPEAAMKNGFKIRN 414 (437)
T ss_pred EEEEEEeEEecCceEEEEEEEEEEEcCCCCcceEEEEEEEEEEEeccccCCCCccCCe
Confidence 65543 34444443333 333 2345678899999999886 3678888875
No 33
>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The alpha- and gamma-proteobacterial members of this CD have, in addition to a hot dog fold, an N-terminal extension.
Probab=95.34 E-value=0.15 Score=41.04 Aligned_cols=55 Identities=15% Similarity=0.119 Sum_probs=43.9
Q ss_pred EEEeEeEEEEcccCCCCCEEEEEEEEeeeCCc-EEEEEEEEEEcCCCcEEEEEEEEE
Q 022737 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGASGKN-GMRRDWLIRSQATGHIFARATSTW 215 (293)
Q Consensus 160 wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~-~~~R~f~I~d~~~Gelia~a~s~w 215 (293)
..+.+++++|.+|...||+|+++.++...... ......++.| ++|+++++++.+.
T Consensus 67 ~~~~~~~~rf~~pv~~Gdtl~~~~~v~~~~~~~~v~~~~~~~n-q~G~~v~~g~a~v 122 (123)
T cd03455 67 ARVKSFAFRLGAPLYAGDTLRFGGRVTAKRDDEVVTVELWARN-SEGDHVMAGTATV 122 (123)
T ss_pred ceEEEEEEEeeccccCCCEEEEEEEEEeeccCcEEEEEEEEEc-CCCCEEEeEEEEE
Confidence 44567899999999999999999999765432 4556688887 8999998888653
No 34
>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]
Probab=95.16 E-value=0.13 Score=49.50 Aligned_cols=103 Identities=19% Similarity=0.139 Sum_probs=84.8
Q ss_pred ccCCceEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCC
Q 022737 97 IEGGVGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWG 176 (293)
Q Consensus 97 ~~~~~~f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~g 176 (293)
.+.+..+..+++|...-++..|.+++..+..++.++....+. ..++-..++-++.+-|.+|...+
T Consensus 327 ~e~~~~~~~t~~V~P~M~n~~Gtis~gv~~~ll~e~~qr~l~---------------k~~~~niiIE~i~iyflk~vqid 391 (432)
T COG4109 327 SEKGDEYGVTVEVEPQMINSLGTISNGVFTELLTEVVQRVLR---------------KKKKRNIIIENITIYFLKPVQID 391 (432)
T ss_pred hhhccccceEEEechhhccccccchHHHHHHHHHHHHHHHHH---------------HhcCCceEEEeeeeeeecceecc
Confidence 344555666788999999999999999999999998765431 23344678889999999999999
Q ss_pred CEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEE
Q 022737 177 EVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (293)
Q Consensus 177 D~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (293)
+.++|..++.+.||.+...+.+|+. +|++++.|-...-
T Consensus 392 ~~l~I~prIl~~gR~~a~idvei~~--~~~ivaKAiv~~q 429 (432)
T COG4109 392 SVLEIYPRILEEGRKFAKIDVEIYH--DGQIVAKAIVTVQ 429 (432)
T ss_pred cEEEEeeeeeccccccceeEEEEee--Ccchhhhheeeee
Confidence 9999999999999999999999995 6788887765443
No 35
>PRK13691 (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional
Probab=95.13 E-value=0.32 Score=41.95 Aligned_cols=67 Identities=9% Similarity=-0.009 Sum_probs=50.1
Q ss_pred EEeEeEEEEcccCCCCCEEEEEEEEeeeC----CcEEEEEEEEEEcCCCcEEEEEEEEEEEEeccCCccccC
Q 022737 161 VVSRMQVEIDHYPIWGEVVEIDTWVGASG----KNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKI 228 (293)
Q Consensus 161 VV~r~~I~y~r~p~~gD~V~I~T~v~~~~----~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~trRpvri 228 (293)
+-...+++|.+|++.||+|+.+.++.... +-......++.| ++|++++++..+++.-+.+.....+.
T Consensus 85 v~~~q~~~f~rPV~~GDtL~~~~~V~~~~~~~~~g~V~~~~~~~N-Q~Ge~V~~~~~~~~~~~~~~~~~~~~ 155 (166)
T PRK13691 85 VQVDQRFVFHKPVLAGDKLWARMDIHSVDERFGADIVVTRNVCTN-DDGELVMEAYTTLMGQQGDNSASLKW 155 (166)
T ss_pred eeeeeEEEEeCCcCCCCEEEEEEEEEEEEEcCCCcEEEEEEEEEC-CCCCEEEEEEEEEEEecCCCceeecc
Confidence 33567889999999999999999887652 124566677887 89999999998887766544444443
No 36
>cd00556 Thioesterase_II Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=94.87 E-value=0.19 Score=38.10 Aligned_cols=57 Identities=12% Similarity=0.026 Sum_probs=50.7
Q ss_pred eEEEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEE
Q 022737 159 IWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (293)
Q Consensus 159 ~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (293)
.-+...+++.|.+|+..++.+..+.++...++....++-++++ ++|++++.+.....
T Consensus 42 ~~~t~~~~i~F~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~-~~G~lva~~~~~~~ 98 (99)
T cd00556 42 GFASLDHHIYFHRPGDADEWLLYEVESLRDGRSRALRRGRAYQ-RDGKLVASATQSFL 98 (99)
T ss_pred CeeeeEEEEEEcCCCCCCccEEEEEEecccCCCceEEEEEEEC-CCCcEEEEEEEeEc
Confidence 4577899999999999999999999999999999888899996 67999999987653
No 37
>cd01288 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.
Probab=94.84 E-value=0.32 Score=39.02 Aligned_cols=86 Identities=8% Similarity=-0.012 Sum_probs=59.0
Q ss_pred cCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEE
Q 022737 120 ATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLI 199 (293)
Q Consensus 120 V~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I 199 (293)
+.-.-.++++.+++..+.. ... .....+..+.+.-.+++|.+|+..||.+++++++...+......+.++
T Consensus 45 ~Pg~l~iE~~aQ~~~~~~~--------~~~--~~~~~~~~~l~~~~~~kf~~pv~pgd~l~i~~~v~~~~~~~~~~~~~~ 114 (131)
T cd01288 45 MPGVLIIEALAQAAGILGL--------KSL--EDFEGKLVYFAGIDKARFRKPVVPGDQLILEVELLKLRRGIGKFKGKA 114 (131)
T ss_pred CCchHHHHHHHHHHHHHhh--------hcc--cccCCcEEEEeeecccEEccccCCCCEEEEEEEEEEeeCCEEEEEEEE
Confidence 3334466677777665431 100 001233455566689999999999999999999988776666666777
Q ss_pred EEcCCCcEEEEEEEEEEE
Q 022737 200 RSQATGHIFARATSTWVM 217 (293)
Q Consensus 200 ~d~~~Gelia~a~s~wV~ 217 (293)
+ .+|+++++|+...+.
T Consensus 115 ~--~~g~~v~~~~~~~~~ 130 (131)
T cd01288 115 Y--VDGKLVAEAELMFAI 130 (131)
T ss_pred E--ECCEEEEEEEEEEEE
Confidence 6 578999999887664
No 38
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=94.62 E-value=0.39 Score=37.96 Aligned_cols=56 Identities=11% Similarity=-0.026 Sum_probs=44.7
Q ss_pred eeEEEeEeEEEEcccCCCCCEEEEEEEEeeeCC----cEEEEEEEEEEcCCCcEEEEEEEE
Q 022737 158 LIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGK----NGMRRDWLIRSQATGHIFARATST 214 (293)
Q Consensus 158 ~~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~----~~~~R~f~I~d~~~Gelia~a~s~ 214 (293)
..+++...+++|.+|+..||+|+++.++..... .......+..| ++|+++..|...
T Consensus 66 ~~~~~~~~~~~f~~Pv~~Gd~l~~~~~v~~~~~~~~~~~v~~~~~~~n-~~g~~v~~g~~~ 125 (127)
T cd03441 66 DGANLGSQSVRFLAPVFPGDTLRVEVEVLGKRPSKGRGVVTVRTEARN-QGGEVVLSGEAT 125 (127)
T ss_pred ccceeEEeEEEEeCCcCCCCEEEEEEEEEEeeccCCCcEEEEEEEEEe-CCCCEEEEEEEE
Confidence 367788999999999999999999999987643 24566677787 688888886653
No 39
>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and 17-beta-hydroxysteriod dehydrogenase (HSD).
Probab=94.61 E-value=0.48 Score=38.74 Aligned_cols=54 Identities=9% Similarity=-0.023 Sum_probs=42.7
Q ss_pred EEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCC-CcEEEEEEEEE
Q 022737 161 VVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQAT-GHIFARATSTW 215 (293)
Q Consensus 161 VV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~-Gelia~a~s~w 215 (293)
.+.+++++|.+|...||+|+++.++.+........++++++ ++ |+.+.++..+.
T Consensus 69 ~~~~~~~rf~~PV~~gdtl~~~~~v~~~~~~~~~~~~~~~n-q~~g~~V~~g~~~v 123 (126)
T cd03447 69 RVRSFTASFVGMVLPNDELEVRLEHVGMVDGRKVIKVEARN-EETGELVLRGEAEV 123 (126)
T ss_pred eEEEEEEEEcccCcCCCEEEEEEEEEEEeCCeEEEEEEEEE-CCCCCEEEEEEEEE
Confidence 34567999999999999999999998765545566788887 55 88888887643
No 40
>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional
Probab=94.44 E-value=0.56 Score=40.07 Aligned_cols=60 Identities=8% Similarity=0.119 Sum_probs=47.8
Q ss_pred eEeEEEEcccCCCCCEEEEEEEEeeeC----CcEEEEEEEEEEcCCCcEEEEEEEEEEEEeccCC
Q 022737 163 SRMQVEIDHYPIWGEVVEIDTWVGASG----KNGMRRDWLIRSQATGHIFARATSTWVMMNQQTR 223 (293)
Q Consensus 163 ~r~~I~y~r~p~~gD~V~I~T~v~~~~----~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~tr 223 (293)
...+++|.+|++.||+|+++.++...+ +-....+..++| ++|+++++++++.+.-..+.+
T Consensus 87 ~~q~~~f~~PV~~GDtL~~~~eV~~~~~~~~~giv~~~~~v~N-q~Ge~V~~~~~~~~~r~~~~~ 150 (159)
T PRK13692 87 VDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIVTKNIVTN-EEGDVVQETYTTLAGRAGEDG 150 (159)
T ss_pred eeeEEEEeCCccCCCEEEEEEEEEEEEEcCCceEEEEEEEEEc-CCCCEEEEEEEEEEEecCCcC
Confidence 447899999999999999999886542 234566788887 899999999999888765544
No 41
>PRK00006 fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Reviewed
Probab=94.28 E-value=2.6 Score=34.81 Aligned_cols=59 Identities=7% Similarity=0.068 Sum_probs=46.4
Q ss_pred eEEEeE-eEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEEEe
Q 022737 159 IWVVSR-MQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMN 219 (293)
Q Consensus 159 ~wVV~r-~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~vD 219 (293)
...+.. -+++|.+|+..||+|+++.++...++.....+.++. .+|+++++|+...++-|
T Consensus 87 ~~~l~gi~~~kF~~pv~pGd~l~i~~~i~~~~~~~v~~~~~~~--~~g~~v~~~~~~~~~~~ 146 (147)
T PRK00006 87 LVYFAGIDKARFKRPVVPGDQLILEVELLKQRRGIWKFKGVAT--VDGKLVAEAELMFAIRD 146 (147)
T ss_pred EEEEeeeeEEEEccccCCCCEEEEEEEEEEeeCCEEEEEEEEE--ECCEEEEEEEEEEEEEc
Confidence 334444 479999999999999999999877666666667776 48999999999887644
No 42
>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain. This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=94.15 E-value=0.34 Score=39.53 Aligned_cols=51 Identities=8% Similarity=0.102 Sum_probs=40.6
Q ss_pred eEEEEcccCCCCCEEEEEEEEeeeCC------cEEEEEEEEEEcCCCcEEEEEEEEEE
Q 022737 165 MQVEIDHYPIWGEVVEIDTWVGASGK------NGMRRDWLIRSQATGHIFARATSTWV 216 (293)
Q Consensus 165 ~~I~y~r~p~~gD~V~I~T~v~~~~~------~~~~R~f~I~d~~~Gelia~a~s~wV 216 (293)
.+++|.+|+..||+|+++.++..... ........++| ++|++++++..+.+
T Consensus 83 ~~~~f~~pv~~GD~l~~~~~v~~~~~~~~~~~~~v~~~~~~~n-q~g~~v~~~~~~~l 139 (140)
T cd03446 83 DNLRFLNPVFIGDTIRAEAEVVEKEEKDGEDAGVVTRRIEVVN-QRGEVVQSGEMSLL 139 (140)
T ss_pred ceEEEcCCCCCCCEEEEEEEEEEecccCCCCceEEEEEEEEEc-CCCCEEEEEEEeee
Confidence 48999999999999999999976531 13455677787 79999999987654
No 43
>TIGR01750 fabZ beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ. This enzyme, FabZ, shows overlapping substrate specificity with FabA with regard to chain length in fatty acid biosynthesis. FabZ works preferentially on shorter chains and is often designated (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, although its actual specificity is broader. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains.
Probab=94.13 E-value=2.7 Score=34.38 Aligned_cols=86 Identities=9% Similarity=0.034 Sum_probs=57.0
Q ss_pred cCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcC-CeeEEEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEE
Q 022737 120 ATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRN-NLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWL 198 (293)
Q Consensus 120 V~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~-g~~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~ 198 (293)
+--.-.++++-+++..++ |.... ..... ...+.+.--+++|.+++..||++++..++...+......+.+
T Consensus 53 ~Pg~l~iE~~aQ~~~~~~--------~~~~~-~~~~~~~~~~l~~~~~~kF~~~v~pGd~l~i~~~i~~~~~~~~~~~~~ 123 (140)
T TIGR01750 53 MPGVLIVEALAQAGGVLA--------ILSLG-GEIGKGKLVYFAGIDKAKFRRPVVPGDQLILHAEFLKKRRKIGKFKGE 123 (140)
T ss_pred ChHHHHHHHHHHHHHHHh--------ecccc-ccCCCCcEEEEeecceeEECCccCCCCEEEEEEEEEEccCCEEEEEEE
Confidence 445557778777766442 11110 00112 234444446999999999999999999998766555565666
Q ss_pred EEEcCCCcEEEEEEEEEE
Q 022737 199 IRSQATGHIFARATSTWV 216 (293)
Q Consensus 199 I~d~~~Gelia~a~s~wV 216 (293)
+. .+|+++++|+.+.+
T Consensus 124 ~~--~~g~~va~~~~~~~ 139 (140)
T TIGR01750 124 AT--VDGKVVAEAEITFA 139 (140)
T ss_pred EE--ECCEEEEEEEEEEE
Confidence 75 58999999998764
No 44
>cd03453 SAV4209_like SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=94.03 E-value=0.5 Score=38.24 Aligned_cols=52 Identities=8% Similarity=-0.047 Sum_probs=41.1
Q ss_pred EeEeEEEEcccCCCCCEEEEEEEEeeeC----CcEEEEEEEEEEcCCCcEEEEEEEE
Q 022737 162 VSRMQVEIDHYPIWGEVVEIDTWVGASG----KNGMRRDWLIRSQATGHIFARATST 214 (293)
Q Consensus 162 V~r~~I~y~r~p~~gD~V~I~T~v~~~~----~~~~~R~f~I~d~~~Gelia~a~s~ 214 (293)
+.+++++|.+|...||+|+++.++.+.. +.....+.++.| ++|+++..++.+
T Consensus 70 i~~~~~rf~~Pv~~Gdtl~~~~~v~~~~~~~~~~~v~~~~~~~n-q~g~~v~~g~a~ 125 (127)
T cd03453 70 VVSFGVRFTKPVPVPDTLTCTGIVVEKTVADGEDALTVTVDATD-QAGGKKVLGRAI 125 (127)
T ss_pred eEEEEEEECCcCcCCCEEEEEEEEEEEEecCCCcEEEEEEEEEE-cCCCEEEEEEEE
Confidence 3577899999999999999999986532 234566788888 889998888754
No 45
>cd03454 YdeM YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function. YdeM has sequence similarity to the hot-dog fold of (R)-specific enoyl-CoA hydratase. Other enzymes with this fold include the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=93.96 E-value=0.34 Score=39.70 Aligned_cols=51 Identities=8% Similarity=-0.026 Sum_probs=41.2
Q ss_pred eEEEEcccCCCCCEEEEEEEEeeeC-------CcEEEEEEEEEEcCCCcEEEEEEEEEE
Q 022737 165 MQVEIDHYPIWGEVVEIDTWVGASG-------KNGMRRDWLIRSQATGHIFARATSTWV 216 (293)
Q Consensus 165 ~~I~y~r~p~~gD~V~I~T~v~~~~-------~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (293)
.+++|.+|+..||+|+++.++.+.. .-.......+.| ++|++++++..+.+
T Consensus 81 ~~~~f~~pv~~Gd~l~~~~~v~~~~~~~~~~~~~~v~~~~~~~n-q~g~~v~~~~~~~~ 138 (140)
T cd03454 81 DELRWPRPVRPGDTLSVEVEVLDKRPSRSRPDRGIVTLRSETLN-QRGEVVLTFEATVL 138 (140)
T ss_pred eeeEeCCCCCCCCEEEEEEEEEEEeecCCCCCCeEEEEEEEEEc-CCCCEEEEEEehhe
Confidence 4899999999999999999997653 124566678887 89999999987654
No 46
>PRK04424 fatty acid biosynthesis transcriptional regulator; Provisional
Probab=93.83 E-value=0.67 Score=40.55 Aligned_cols=59 Identities=10% Similarity=-0.065 Sum_probs=46.2
Q ss_pred CeeEEEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEE
Q 022737 157 NLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVM 217 (293)
Q Consensus 157 g~~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~ 217 (293)
+...+....+++|.+|+..||+|.++.++...++......-.+. .+|+++++|....+.
T Consensus 123 ~~~~~~~i~~irF~kPV~pGD~L~~ea~v~~~~~~~~~v~~~~~--v~g~~V~ege~~~~~ 181 (185)
T PRK04424 123 AELALTGVANIRFKRPVKLGERVVAKAEVVRKKGNKYIVEVKSY--VGDELVFRGKFIMYR 181 (185)
T ss_pred CcEEEEEeeeEEEccCCCCCCEEEEEEEEEEccCCEEEEEEEEE--ECCEEEEEEEEEEEE
Confidence 34455666799999999999999999999987665554445555 579999999987765
No 47
>PF14539 DUF4442: Domain of unknown function (DUF4442); PDB: 1YOC_B 1SH8_B.
Probab=93.66 E-value=1.5 Score=36.07 Aligned_cols=99 Identities=13% Similarity=0.078 Sum_probs=63.7
Q ss_pred eEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEE
Q 022737 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (293)
Q Consensus 102 ~f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I 181 (293)
..+..++.++.--++.|.++-..++...+-+....+. .. ...+..|++..++++|.+|.+ ..|..
T Consensus 30 ~~~v~l~~~~~~~N~~gt~h~gAl~~laE~~~g~~~~------~~-------l~~~~~~~~k~~~i~f~kpa~--g~v~a 94 (132)
T PF14539_consen 30 RVVVRLPLRPRNRNHVGTIHAGALFTLAEPAYGLLLM------SN-------LGDKYRVWDKSAEIDFLKPAR--GDVTA 94 (132)
T ss_dssp EEEEEE-S-CCGB-TTSSB-HHHHHHHHHCHHHHHHH------HH-------S-TTEEEEEEEEEEEE-S-----S-EEE
T ss_pred EEEEEEcCCccccCcCcchHHHHHHHHHHHHHHHHHH------Hh-------CCCcEEEEEEeeEEEEEeccC--CcEEE
Confidence 5567788888999999999999999999987655431 01 122678889999999999965 34444
Q ss_pred EEEEee--eC-CcEEEEEEEEEEcCCCcEEEEEEEEEE
Q 022737 182 DTWVGA--SG-KNGMRRDWLIRSQATGHIFARATSTWV 216 (293)
Q Consensus 182 ~T~v~~--~~-~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (293)
+..+.. .+ +........++| ++|++++++..+|-
T Consensus 95 ~~~~~~e~~~~~~~~~~~v~i~D-~~G~~Va~~~~t~~ 131 (132)
T PF14539_consen 95 TAELTEEQIGERGELTVPVEITD-ADGEVVAEATITWY 131 (132)
T ss_dssp EEE-TCCHCCHEEEEEEEEEEEE-TTC-EEEEEEEEEE
T ss_pred EEEcCHHHhCCCcEEEEEEEEEE-CCCCEEEEEEEEEE
Confidence 444433 33 334455677888 89999999999994
No 48
>cd03451 FkbR2 FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.
Probab=93.60 E-value=0.44 Score=39.11 Aligned_cols=52 Identities=10% Similarity=-0.025 Sum_probs=41.3
Q ss_pred eEEEEcccCCCCCEEEEEEEEeeeCC-------cEEEEEEEEEEcCCCcEEEEEEEEEEE
Q 022737 165 MQVEIDHYPIWGEVVEIDTWVGASGK-------NGMRRDWLIRSQATGHIFARATSTWVM 217 (293)
Q Consensus 165 ~~I~y~r~p~~gD~V~I~T~v~~~~~-------~~~~R~f~I~d~~~Gelia~a~s~wV~ 217 (293)
.+++|.+|+..||+|+++.++..... .......++.+ ++|+++++++.+.++
T Consensus 84 ~~~~f~~pv~~GDtl~~~~~v~~~~~~~~~~~~~~v~~~~~~~n-q~g~~V~~~~~~~~~ 142 (146)
T cd03451 84 DEVRFPAPVFHGDTLYAESEVLSKRESKSRPDAGIVTVRTVGYN-QDGEPVLSFERTALV 142 (146)
T ss_pred cEEEecCCCCCCCEEEEEEEEEEEecCCCCCCCeEEEEEEEEEC-CCCCEEEEEEehhEE
Confidence 48999999999999999999976532 24455577776 789999999987654
No 49
>cd00493 FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation. The third step of the elongation cycle, the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, is catalyzed by FabA or FabZ. FabA is bifunctional and catalyzes an additional isomerization reaction of trans-2-acyl-ACP to cis-3-acyl-ACP, an essential reaction to unsaturated fatty acid synthesis. FabZ is the primary dehydratase that participates in the elongation cycles of saturated as well as unsaturated fatty acid biosynthesis, whereas FabA is more active in the dehydration of beta-hydroxydecanoyl-ACP. The FabA structure is homodimeric with two independent active sites located at the dimer interface.
Probab=93.17 E-value=3.5 Score=32.68 Aligned_cols=86 Identities=14% Similarity=0.075 Sum_probs=60.6
Q ss_pred CCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEE
Q 022737 117 DKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRD 196 (293)
Q Consensus 117 ~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~ 196 (293)
++.+--.-.++++-+++..++.. . +... -.....+..+.--+++|.++...||+++++.++...+......+
T Consensus 41 ~p~lPg~~~iE~~aQ~~~~~~~~---~--~~~~---~~~~~~~~l~~~~~~kf~~~v~pgd~l~i~~~i~~~~~~~~~~~ 112 (131)
T cd00493 41 DPVMPGVLGIEAMAQAAAALAGL---L--GLGK---GNPPRLGYLAGVRKVKFRGPVLPGDTLTLEVELLKVRRGLGKFD 112 (131)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHh---c--cccc---ccCCcEEEEEEcceeEECCCcCCCCEEEEEEEEEEeeCCEEEEE
Confidence 35677778888988888777421 1 1100 01223344555579999999999999999999988766566666
Q ss_pred EEEEEcCCCcEEEEEE
Q 022737 197 WLIRSQATGHIFARAT 212 (293)
Q Consensus 197 f~I~d~~~Gelia~a~ 212 (293)
..++. +|+++++++
T Consensus 113 ~~~~~--~g~~v~~~~ 126 (131)
T cd00493 113 GRAYV--DGKLVAEAE 126 (131)
T ss_pred EEEEE--CCEEEEEEE
Confidence 77775 699999988
No 50
>KOG4366 consensus Predicted thioesterase [General function prediction only]
Probab=92.11 E-value=0.025 Score=49.59 Aligned_cols=106 Identities=8% Similarity=-0.057 Sum_probs=81.3
Q ss_pred EEeeecCCCCCC-CcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEEEEE
Q 022737 107 VVVRSYEVGPDK-TATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWV 185 (293)
Q Consensus 107 ~~VR~~D~D~~G-hV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~T~v 185 (293)
...-..|+|..- |+||++|++=+.=|+.+|+.. .|+ ..-+...+...|..-..+.|.|.++.=++..|.|.+
T Consensus 55 g~cls~dlDtll~HmnNArYfrElDfAR~~~~~r-----~~l--~~~lr~~~~~~v~~As~~ryrr~Irpfh~y~v~sRi 127 (213)
T KOG4366|consen 55 GLCLSTDLDTLLSHMNNARYFRELDFARVNFYCR-----TGL--YLMLRSKRGPYVQGASVFRYRREIRPFHPYSVSSRI 127 (213)
T ss_pred ceeecchHHHHHHHhhhhHHHHHhhHHHHHHHHH-----HhH--HHHHHhcCCCeeechhhhhhhhhcCCCCccceeeEE
Confidence 445557777776 999999999999999998631 122 112566677777778888999999999999999999
Q ss_pred eeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEEEe
Q 022737 186 GASGKNGMRRDWLIRSQATGHIFARATSTWVMMN 219 (293)
Q Consensus 186 ~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~vD 219 (293)
...+...++.+..+....+|=+++.+.+..++.|
T Consensus 128 I~WDekaiyle~rFv~~sd~fvcala~~kq~l~d 161 (213)
T KOG4366|consen 128 ICWDEKAIYLESRFVILSDGFVCALALTKQVLKD 161 (213)
T ss_pred EEEchhhhhhhhheeeccCceEeehHHHHHHHhc
Confidence 8877666554444443478999999999999888
No 51
>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein. Orthologs of MaoC include PaaZ [Escherichia coli] and PaaN [Pseudomonas putida], which are putative ring-opening enzymes involved in phenylacetic acid degradation. The C-terminal domain of MaoC has sequence similarity to (R)-specific enoyl-CoA hydratase,Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. MaoC also has an N-terminal PutA domain like that found in the E. coli PutA proline dehydrogenase and other members of the aldehyde dehydrogenase family.
Probab=91.34 E-value=1.2 Score=36.79 Aligned_cols=52 Identities=10% Similarity=0.035 Sum_probs=41.1
Q ss_pred eEEEEcccCCCCCEEEEEEEEeeeC--C----cEEEEEEEEEEcCCCcEEEEEEEEEEE
Q 022737 165 MQVEIDHYPIWGEVVEIDTWVGASG--K----NGMRRDWLIRSQATGHIFARATSTWVM 217 (293)
Q Consensus 165 ~~I~y~r~p~~gD~V~I~T~v~~~~--~----~~~~R~f~I~d~~~Gelia~a~s~wV~ 217 (293)
.+++|.+|+..||+|+++..+.... + ..+....++.| ++|+++++++....+
T Consensus 81 ~~~rf~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~n-q~g~~V~~~~~~~~~ 138 (142)
T cd03452 81 ENLRFLEPVYPGDTIQVRLTCKRKIPRDGQDYGVVRWDAEVTN-QNGELVASYDILTLV 138 (142)
T ss_pred ceEEECCCCCCCCEEEEEEEEEEEeecCCCCcEEEEEEEEEEe-cCCCEEEEEEehHee
Confidence 4999999999999999999887652 1 14566778887 899999998865543
No 52
>PF13452 MaoC_dehydrat_N: N-terminal half of MaoC dehydratase; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1S9C_K 3OML_A 3KHP_A.
Probab=91.23 E-value=0.91 Score=36.68 Aligned_cols=51 Identities=12% Similarity=0.035 Sum_probs=36.9
Q ss_pred eEEEeEeEEEEcccCCCCCEEEEEEEEeeeCC------c-EEEEEEEEEEcCCCcEEEE
Q 022737 159 IWVVSRMQVEIDHYPIWGEVVEIDTWVGASGK------N-GMRRDWLIRSQATGHIFAR 210 (293)
Q Consensus 159 ~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~------~-~~~R~f~I~d~~~Gelia~ 210 (293)
.-+-...+++|++|++.||+|++++.+..... . ....+.+++| ++|+++++
T Consensus 74 ~~vh~~~~~~~h~Pl~~Gd~l~~~~~v~~v~~k~g~G~~~~v~~~~~~~~-~~Ge~v~t 131 (132)
T PF13452_consen 74 RLVHGEQDIEFHRPLRPGDTLTATSRVTDVYDKRGAGKGVFVTVETEYTD-QDGELVAT 131 (132)
T ss_dssp GEEEEEEEEEESS--BSSEEEEEEEEEEEEEEES-TTSEEEEEEEEEEE--CTTEEEEE
T ss_pred hEEecCcEEEEeCCCCCCCEEEEEEEEEEEEEecCCCCEEEEEEEEEEEC-CCCCEEEe
Confidence 55667899999999999999999998876421 2 2355677787 88998875
No 53
>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated
Probab=91.17 E-value=2 Score=42.99 Aligned_cols=66 Identities=12% Similarity=0.081 Sum_probs=49.7
Q ss_pred eEEEeEeEEEEcccCCCCCEEEEEEEEeee--CCcEEEEEEEEEEcCCCcEEEEEEEEEEEEeccCCcc
Q 022737 159 IWVVSRMQVEIDHYPIWGEVVEIDTWVGAS--GKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRL 225 (293)
Q Consensus 159 ~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~--~~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~trRp 225 (293)
+.+....+++|.+|.+.||+|+++.++... ++.......++.| ++|+++.+++.++++-...-.+|
T Consensus 82 ~~~~~~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~v~~~~~~~n-q~G~~V~~g~~~~l~~~~~~~~~ 149 (466)
T PRK08190 82 GTIYLGQSLRFRRPVRIGDTLTVTVTVREKDPEKRIVVLDCRCTN-QDGEVVITGTAEVIAPTEKVRRP 149 (466)
T ss_pred ceEEEEEEEEEeCCcCCCCEEEEEEEEEEEECCCCEEEEEEEEEe-CCCCEEEEEEEEeeccccccccc
Confidence 345567899999999999999999999764 3334556677787 89999999998877654443334
No 54
>cd03445 Thioesterase_II_repeat2 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=90.17 E-value=2.7 Score=32.56 Aligned_cols=54 Identities=13% Similarity=0.021 Sum_probs=47.2
Q ss_pred EEEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEE
Q 022737 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTW 215 (293)
Q Consensus 160 wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~w 215 (293)
..+...++.|.+|+..+.++++++.....|+....+.-... ++|+++..+...+
T Consensus 39 ~~~~s~~~~Fl~p~~~~~pv~~~v~~lr~GRs~~~~~V~~~--Q~g~~~~~a~~sf 92 (94)
T cd03445 39 RVPHSLHSYFLRPGDPDQPIEYEVERLRDGRSFATRRVRAV--QNGKVIFTATASF 92 (94)
T ss_pred CCeEEEEEEecCCCCCCCCEEEEEEEEECCCcEEEEEEEEE--ECCEEEEEEEEEE
Confidence 34678999999999999999999999999999999888887 5789888887654
No 55
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=89.57 E-value=2.6 Score=37.82 Aligned_cols=57 Identities=19% Similarity=0.101 Sum_probs=47.9
Q ss_pred EEEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEEEe
Q 022737 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMN 219 (293)
Q Consensus 160 wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~vD 219 (293)
..+..++++|.++...| .+++++...+.|+....+.-++. ++|+++++|...+..-+
T Consensus 34 ~~~~s~~~~fl~p~~~~-~~~~~v~~~r~Gr~~~~~~v~~~--q~~~~~~~a~~~f~~~~ 90 (255)
T PF13622_consen 34 FDPHSLHVYFLRPVPPG-PVEYRVEVLRDGRSFSTRQVELS--QDGKVVATATASFGRPE 90 (255)
T ss_dssp SEEEEEEEEESS--BSC-EEEEEEEEEEESSSEEEEEEEEE--ETTEEEEEEEEEEE--T
T ss_pred CceEEEEeEeccccccC-CEEEEEEEeeCCCcEEEEEEEEE--ECCcCEEEEEEEEccCc
Confidence 78899999999999999 99999999999999999989998 58889988888766654
No 56
>TIGR02447 yiiD_Cterm thioesterase domain, putative. This family consists of a broadly distributed uncharacterized domain found often as a standalone protein. The member from Shewanella oneidensis, PDB|1T82_A (Forouhar, et al., unpublished) is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an Acetyltransf_1 domain (PFAM model pfam00583). The function of this protein is unknown.
Probab=89.06 E-value=12 Score=30.98 Aligned_cols=101 Identities=13% Similarity=0.113 Sum_probs=67.5
Q ss_pred EEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEE
Q 022737 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEID 182 (293)
Q Consensus 103 f~~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~ 182 (293)
-+.+..++. ..++.|.++=..++.....+....++ +.. .....+..-|..+.+++|.+|.+- + +..+
T Consensus 24 ~~v~~pl~~-n~N~~G~~hGG~l~tlad~a~~~~~~--------~~~--~~~~~~~~~vt~~~~i~yl~P~~~-~-~~a~ 90 (138)
T TIGR02447 24 LRLSAPLAA-NINHHGTMFGGSLYTLATLSGWGLLW--------LRL--QELGIDGDIVIADSHIRYLAPVTG-D-PVAN 90 (138)
T ss_pred EEEEeECCC-CcCCCCceehhHHHHHHHHHHHHHHH--------HHH--HHhCCCCcEEEEEeeeEEcCCcCC-C-eEEE
Confidence 345566776 48999999999999999644322110 000 011122356788999999999974 3 5544
Q ss_pred EEE-------------eeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEEE
Q 022737 183 TWV-------------GASGKNGMRRDWLIRSQATGHIFARATSTWVMM 218 (293)
Q Consensus 183 T~v-------------~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~v 218 (293)
... ..-|+..+..+-+|++ +|+++|+++.+++.+
T Consensus 91 ~~~~~~~~~~~~~~~l~~~gr~~~~~~~~v~~--~~~lvA~~~g~~~~~ 137 (138)
T TIGR02447 91 CEAPDLESWEAFLATLQRGGKARVKLEAQISS--DGKLAATFSGEYVAL 137 (138)
T ss_pred EEcCCHHHHHHHHHHHHhCCceEEEEEEEEEE--CCEEEEEEEEEEEEe
Confidence 444 3446666667788884 779999999998874
No 57
>PLN02864 enoyl-CoA hydratase
Probab=86.66 E-value=4 Score=38.69 Aligned_cols=59 Identities=12% Similarity=0.053 Sum_probs=46.5
Q ss_pred EEeEeEEEEcccCCCCCEEEEEEEEeeeCCc----EEEEEEEEEEcCCCcEEEEEEEEEEEEe
Q 022737 161 VVSRMQVEIDHYPIWGEVVEIDTWVGASGKN----GMRRDWLIRSQATGHIFARATSTWVMMN 219 (293)
Q Consensus 161 VV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~----~~~R~f~I~d~~~Gelia~a~s~wV~vD 219 (293)
|=.+..++++||+..++.+++++++..+... ....+..+.+..+|+++++..++.++-.
T Consensus 95 VHgeq~i~~~rPlp~~~~l~~~~~v~~v~dkG~ga~v~~~~~~~d~~~Ge~v~t~~st~~~Rg 157 (310)
T PLN02864 95 LHGQQYIEIYKPIPSSASVRNKVSIAGLHDKGKAAILELETLSYEKDSGELLCMNRSTIFLRG 157 (310)
T ss_pred eeccceEEEECCCCCCCEEEEEEEEEEEEeCCCcEEEEEEEEEEeCCCCcEEEEEEEEEEEeC
Confidence 3457899999999999999999999876222 2456677776468999999998888865
No 58
>cd01289 FabA_like Domain of unknown function, appears to be related to a diverse group of beta-hydroxydecanoyl ACP dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases (FabZ). This group appears to lack the conserved active site histidine of FabA and FabZ.
Probab=84.81 E-value=21 Score=29.44 Aligned_cols=89 Identities=11% Similarity=-0.034 Sum_probs=60.0
Q ss_pred CCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCC-CCEEEEEEEEeeeCC-cEEE
Q 022737 117 DKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIW-GEVVEIDTWVGASGK-NGMR 194 (293)
Q Consensus 117 ~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~-gD~V~I~T~v~~~~~-~~~~ 194 (293)
++.+--..+++++-+++..+. |+-....-.+...+..+.=-+++|+++... ||.+.++.......+ ....
T Consensus 44 ~~~~P~~l~iE~mAQa~a~~~--------g~~~~~~~~~~~~g~l~~i~~~~f~~~v~p~Gd~l~i~~~~~~~~~~~~~~ 115 (138)
T cd01289 44 HGRLPAWVGIEYMAQAIAAHG--------GLLARQQGNPPRPGFLLGSRKYEAHVDRFDLGSTLLIVVAELLQGDSGLGV 115 (138)
T ss_pred CCCcchHHHHHHHHHHHHHHH--------HHHHHhcCCCCCcEEEEEEEEEEEEcceeCCCCeeEEEeeeeeeCCCcEEE
Confidence 367888899999999876653 110000011334456665569999999766 999999988776653 4445
Q ss_pred EEEEEEEcCCCcEEEEEEEEE
Q 022737 195 RDWLIRSQATGHIFARATSTW 215 (293)
Q Consensus 195 R~f~I~d~~~Gelia~a~s~w 215 (293)
.+-.++ .+|+++|+|+...
T Consensus 116 ~~~~~~--v~~~~va~a~l~~ 134 (138)
T cd01289 116 FECTIE--DQGGVLASGRLNV 134 (138)
T ss_pred EEEEEE--ECCEEEEEEEEEE
Confidence 556666 4789999998653
No 59
>PF03756 AfsA: A-factor biosynthesis hotdog domain; InterPro: IPR005509 The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a Hotdog domain [].
Probab=83.28 E-value=11 Score=30.45 Aligned_cols=89 Identities=11% Similarity=0.231 Sum_probs=58.9
Q ss_pred CCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEEEEEeeeCC-----
Q 022737 116 PDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGK----- 190 (293)
Q Consensus 116 ~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~----- 190 (293)
+.+|+..--+++=+-++..... + ..++. ..+..+++..++++|.++..++-.+.++..+.....
T Consensus 39 ~~dh~~gmll~Ea~RQa~~~~~---h---~~~~v-----p~~~~~~~~~l~~~f~~~~e~~~P~~~~~~~~~~~~~~~~~ 107 (132)
T PF03756_consen 39 PGDHVPGMLLLEAARQAGIALA---H---RFYGV-----PLDHQFVLTSLDFTFSRFAELDVPADLTVRITCRDRRGGRP 107 (132)
T ss_pred CCCccChHHHHHHHHHHHHHhh---c---cccCC-----CCCceEEEEEEEEEEccccccCCCEEEEEEEEeccccCCcc
Confidence 3456666666665555544332 1 12222 123368999999999999988888888877764322
Q ss_pred cEEEEEEEEEEcCCCcEEEEEEEEEEE
Q 022737 191 NGMRRDWLIRSQATGHIFARATSTWVM 217 (293)
Q Consensus 191 ~~~~R~f~I~d~~~Gelia~a~s~wV~ 217 (293)
..+.....+. ++|+.+++++..+-|
T Consensus 108 ~~~~~~v~~~--q~g~~~a~~~~~~tc 132 (132)
T PF03756_consen 108 RGLRFRVTVS--QGGRVVATASMTFTC 132 (132)
T ss_pred ceEEEEEEEE--ECCEEEEEEEEEEEC
Confidence 2455667777 689999999988754
No 60
>COG2030 MaoC Acyl dehydratase [Lipid metabolism]
Probab=79.51 E-value=13 Score=31.47 Aligned_cols=59 Identities=10% Similarity=-0.031 Sum_probs=43.1
Q ss_pred eEEEeEeEEEEcccCCCCCEEEEEEEEeeeC--C--cEEEEEEEEEEcCCCcEEEEEEEEEEEE
Q 022737 159 IWVVSRMQVEIDHYPIWGEVVEIDTWVGASG--K--NGMRRDWLIRSQATGHIFARATSTWVMM 218 (293)
Q Consensus 159 ~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~--~--~~~~R~f~I~d~~~Gelia~a~s~wV~v 218 (293)
+-.+.-.+++|.+|.+.||+|..++++.... + -........++ ++|+....+...+...
T Consensus 93 ~~~~g~~~vRF~~PV~~Gdtl~~~~~v~~~~~~~~~G~v~~~~~~~~-~~g~~v~~~~~~~~~~ 155 (159)
T COG2030 93 GANLGGDEVRFVKPVFPGDTLRARVEVLDKRPSKSRGLVTLRLETVN-QEGELVLTLEATVLVL 155 (159)
T ss_pred eeeccccceEecCCCCCCCEEEEEEEEEEeeecCCceEEEEEEEEEc-cCCcEEEEEEEeEeEe
Confidence 3445567899999999999999999997642 1 12233355665 7889888888877653
No 61
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=78.76 E-value=8.7 Score=34.98 Aligned_cols=55 Identities=7% Similarity=-0.027 Sum_probs=48.6
Q ss_pred EEEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEE
Q 022737 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (293)
Q Consensus 160 wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (293)
..+..+++.|.+++..+..|+++++...-|+.+..|.-.++ ++|++++++...+.
T Consensus 44 ~~~~S~h~~Fl~~~~~~~pv~~~V~~lR~GRs~~~r~V~~~--Q~g~~~~~a~asf~ 98 (271)
T TIGR00189 44 FIPHSLHSYFVRAGDPKKPIIYDVERLRDGRSFITRRVKAV--QHGKTIFTLQASFQ 98 (271)
T ss_pred CCcceeEEEecCCCCCCCCEEEEEEEeeCCCceEEEEEEEE--ECCEEEEEEEEEcc
Confidence 34568999999999999999999999999999999988888 58899999887765
No 62
>PF07977 FabA: FabA-like domain; InterPro: IPR013114 Fatty acids biosynthesis occurs by two distinct pathways: in fungi, mammals and mycobacteria, type I or associative fatty-acid biosynthesis (type I FAS) is accomplished by multifunctional proteins in which distinct domains catalyse specific reactions; in plants and most bacteria, type II or dissociative fatty-acid biosynthesis (type II FAS) is accomplished by distinct enzymes []. Both FabZ and FabA catalyse the dehydration of beta-hydroxyacyl acyl carrier protein (ACP) to trans 2-enoyl ACP. However, FabZ and FabA display subtle differences in substrate specificities, whereby FabA is most effective on acyl ACPs of 9-11 carbon atoms in length, while FabZ is less specific. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains. This enzyme domain has a HotDog fold.; PDB: 3D6X_F 2GLV_J 2GLM_E 2GLP_E 2GLL_C 1U1Z_F 3ESI_A 3AZB_T 3AZA_M 3AZ9_U ....
Probab=78.48 E-value=17 Score=29.58 Aligned_cols=100 Identities=13% Similarity=0.015 Sum_probs=58.6
Q ss_pred EEEEEeeecCCCCCC------CcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhh-cCCeeEEEeEeEEEEcccCCCC
Q 022737 104 RQTVVVRSYEVGPDK------TATLESILNLFQETALNHVWMSGLLSNGFGATHGMM-RNNLIWVVSRMQVEIDHYPIWG 176 (293)
Q Consensus 104 ~~~~~VR~~D~D~~G------hV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~-~~g~~wVV~r~~I~y~r~p~~g 176 (293)
+-...|...+-=..| .+--+-.++.+.+++...+.. .+... ... .....+...--+++|.+++..|
T Consensus 28 ~a~~~v~~~~~~f~gHFp~~Pv~PGvl~iE~~aQ~~~~~~~~-----~~~~~--~~~~~~~~~~l~~~~~~kF~~~v~Pg 100 (138)
T PF07977_consen 28 VARKNVTPDEPFFDGHFPGDPVMPGVLLIEAMAQAAGFLAGY-----SGLAE--GTGEARKVPFLAGIRNVKFRGPVYPG 100 (138)
T ss_dssp EEEEEE-TTSGGGGCSTTTS--B-HHHHHHHHHHHHHHHHHH-----HCCSS--SCCCCCEEEEEEEEEEEEE-S-B-TT
T ss_pred EEEEEeCCCCCEEEcCCCCCCCCCeEhHHHHHHHHHHhHhhh-----ccccc--cCCCcceEEEeccccEEEECccEeCC
Confidence 444555554443333 344445667776776655421 11100 001 1134566777899999999999
Q ss_pred C-EEEEEEEEee---eCCcEEEEEEEEEEcCCCcEEEEEE
Q 022737 177 E-VVEIDTWVGA---SGKNGMRRDWLIRSQATGHIFARAT 212 (293)
Q Consensus 177 D-~V~I~T~v~~---~~~~~~~R~f~I~d~~~Gelia~a~ 212 (293)
| .++++..+.+ .+......+..++ .+|+.+++++
T Consensus 101 ~~~l~~~v~i~~~~~~~~~~~~~~~~~~--vdg~~v~~~~ 138 (138)
T PF07977_consen 101 DKTLRIEVEIKKIRRREGGMAIFDGTAY--VDGELVAEAE 138 (138)
T ss_dssp E-EEEEEEEEEEEEEEETTEEEEEEEEE--ETTEEEEEEE
T ss_pred CcEEEEEEEEEEeecccCCEEEEEEEEE--ECCEEEEEEC
Confidence 9 9999998888 5666667677787 4889998874
No 63
>PRK13188 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed
Probab=77.37 E-value=24 Score=35.52 Aligned_cols=60 Identities=7% Similarity=0.014 Sum_probs=44.0
Q ss_pred eeEEEeEeEEEEcccCCCCCEEEEEEEEee-eCCcEEEEEEEEEEcCCCcEEEEEEEEEEEEe
Q 022737 158 LIWVVSRMQVEIDHYPIWGEVVEIDTWVGA-SGKNGMRRDWLIRSQATGHIFARATSTWVMMN 219 (293)
Q Consensus 158 ~~wVV~r~~I~y~r~p~~gD~V~I~T~v~~-~~~~~~~R~f~I~d~~~Gelia~a~s~wV~vD 219 (293)
.++.+.--+++|.+|+..||+++++..+.. ..+.....+-.+. .+|+++++|+...++.+
T Consensus 401 lg~LlgI~kvKF~~PV~PGDtL~I~veI~~~~~~giv~f~g~~~--vdGelVaeael~~~v~~ 461 (464)
T PRK13188 401 STYFMKIDKVKFRQKVVPGDTLIFKVELLSPIRRGICQMQGKAY--VNGKLVCEAELMAQIVK 461 (464)
T ss_pred eEEEEeccEEEEcCCCCCCCEEEEEEEEEEEecCCEEEEEEEEE--ECCEEEEEEEEEEEEec
Confidence 344444349999999999999999998865 3333445455666 58999999998887653
No 64
>COG0764 FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]
Probab=76.13 E-value=39 Score=28.61 Aligned_cols=60 Identities=12% Similarity=0.088 Sum_probs=46.7
Q ss_pred eeEEEeEeEEEEcccCCCCCEEEEEEEEeeeC-CcEEEEEEEEEEcCCCcEEEEEEEEEEEEe
Q 022737 158 LIWVVSRMQVEIDHYPIWGEVVEIDTWVGASG-KNGMRRDWLIRSQATGHIFARATSTWVMMN 219 (293)
Q Consensus 158 ~~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~-~~~~~R~f~I~d~~~Gelia~a~s~wV~vD 219 (293)
....+.=-+++|+++...||.+.++......+ +......-... -+|+++++|+...+.++
T Consensus 85 ~~~~~gid~~kF~~~V~PGd~l~l~~~~~~~~~~~~~~~~~~a~--Vdg~~v~~a~~~~~~~~ 145 (147)
T COG0764 85 LGYFLGIDNAKFKRPVLPGDQLELEVKLLKSRRLGIGKAKGVAT--VDGKVVAEAELLFAGVE 145 (147)
T ss_pred EEEEEEecceeecCccCCCCEEEEEEEEEEecccceEEEEEEEE--ECCEEEEEEEEEEEEee
Confidence 56777778999999999999999999988877 33333333333 58999999998888765
No 65
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=75.92 E-value=20 Score=28.04 Aligned_cols=57 Identities=7% Similarity=-0.088 Sum_probs=45.7
Q ss_pred eEEEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEE
Q 022737 159 IWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (293)
Q Consensus 159 ~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (293)
.-.-..+.|.|.+++...|-+..+.+....+.-+..-+=.|++ ++|+++|.+..+-+
T Consensus 47 ~~aSldhsi~Fh~~~~~~~W~l~~~~~~~~~~gr~~~~~~l~~-~~G~LvAs~~Q~~l 103 (104)
T cd03444 47 ASASLDHAIWFHRPFRADDWLLYEQRSPRAGNGRGLVEGRIFT-RDGELVASVAQEGL 103 (104)
T ss_pred ceEeeeEEEEEeCCCCCCceEEEEEECccccCCeeEEEEEEEC-CCCCEEEEEEEeee
Confidence 3456678999999999989999998888777666666678887 79999999876543
No 66
>cd03448 HDE_HSD HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins. Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.
Probab=72.68 E-value=22 Score=28.69 Aligned_cols=48 Identities=10% Similarity=0.120 Sum_probs=32.4
Q ss_pred EEEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEE
Q 022737 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARAT 212 (293)
Q Consensus 160 wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~ 212 (293)
-.+..++++|.+|...||+|+++.+.. ++ ....+.++. ++|+++.++.
T Consensus 70 ~~~~~~~~rF~~PV~~gDtl~~~~~~~--~~-~v~~~~~~~--~~g~~v~~g~ 117 (122)
T cd03448 70 ARFKAIKVRFSSPVFPGETLRTEMWKE--GN-RVIFQTKVV--ERDVVVLSNG 117 (122)
T ss_pred ceeEEEEEEEcCCccCCCEEEEEEEEe--CC-EEEEEEEEc--cCCcEEEECC
Confidence 346678999999999999999999853 33 333333333 4666655543
No 67
>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes. All these enzymes contain multiple domains. This domain is found in parts of two enzymes that have been assigned dehydratase activities. A deletion mutant of the C-terminal 271 amino acids in Q02207 from SWISSPROT abolished its 2-enoyl-CoA hydratase activity, suggesting that this region may be a hydratase enzyme []. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1PN4_C 1PN2_B 1S9C_K 3OML_A 1Q6W_B 2B3M_A 3K67_B ....
Probab=69.37 E-value=12 Score=29.74 Aligned_cols=32 Identities=13% Similarity=0.075 Sum_probs=26.1
Q ss_pred eEEEeEeEEEEcccCCCCCEEEEEEEEeeeCC
Q 022737 159 IWVVSRMQVEIDHYPIWGEVVEIDTWVGASGK 190 (293)
Q Consensus 159 ~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~ 190 (293)
...+.+.+++|.+|...||+|.++.++.+...
T Consensus 75 ~~~~~~~~~rF~~PV~~gdtl~~~~~v~~~~~ 106 (122)
T PF01575_consen 75 PARLGRFNVRFRAPVFPGDTLTAEVEVTEKRE 106 (122)
T ss_dssp CEEEEEEEEEESS--BTTEEEEEEEEEEEEEE
T ss_pred ceEEEEEEEEEeccccCCCEEEEEEEEEEEEE
Confidence 56788999999999999999999999977443
No 68
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=68.34 E-value=24 Score=32.86 Aligned_cols=55 Identities=11% Similarity=-0.064 Sum_probs=49.3
Q ss_pred EEEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEE
Q 022737 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (293)
Q Consensus 160 wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (293)
.++...++.|.+|...+..|+.+.....-|+.+..|.-..+ ++|+++..+...+-
T Consensus 55 ~~~hSlh~~Fl~pg~~~~pi~y~Ve~lRdGRSfstr~V~a~--Q~g~~if~~~~sF~ 109 (286)
T PRK10526 55 RLVHSFHSYFLRPGDSQKPIIYDVETLRDGNSFSARRVAAI--QNGKPIFYMTASFQ 109 (286)
T ss_pred CCceEEEEEcCCCCCCCCCEEEEEEEEeCCCceEeEEEEEE--ECCEEEEEEEEEec
Confidence 47789999999999999999999999999999999988888 68999988887665
No 69
>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.
Probab=66.71 E-value=54 Score=27.60 Aligned_cols=59 Identities=10% Similarity=-0.102 Sum_probs=44.4
Q ss_pred eeEEEeEeEEEEcccCCCCC-EEEEEEEEeeeCC----cEEEEEEEEEEcCCCcEEEEEEEEEEEE
Q 022737 158 LIWVVSRMQVEIDHYPIWGE-VVEIDTWVGASGK----NGMRRDWLIRSQATGHIFARATSTWVMM 218 (293)
Q Consensus 158 ~~wVV~r~~I~y~r~p~~gD-~V~I~T~v~~~~~----~~~~R~f~I~d~~~Gelia~a~s~wV~v 218 (293)
.+....--+++|+++...|| +++++..+.+.+. .....+-.++ .+|+++++++..-+.+
T Consensus 84 ~~~l~~~~~~kfr~~v~Pgd~~l~~e~~i~~~~~~~~~~~~~~~~~~~--vdg~~v~~a~~~~~~~ 147 (150)
T cd01287 84 QGAPGGPGEWKYRGQITPHNKKVTYEVHIKEVGRDGPRPYIIADASLW--VDGLRIYEAKDIAVRL 147 (150)
T ss_pred eeEeccceEEEECccCcCCCEEEEEEEEEEEEEccCCccEEEEEEEEE--ECCEEEEEEEccEEEe
Confidence 34455566899999999999 8999999988763 4455555666 4899999998765543
No 70
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=62.08 E-value=22 Score=37.34 Aligned_cols=49 Identities=10% Similarity=0.055 Sum_probs=38.8
Q ss_pred EEEEcccCCCCCEEEEEEEEeeeC--C----cEEEEEEEEEEcCCCcEEEEEEEEE
Q 022737 166 QVEIDHYPIWGEVVEIDTWVGASG--K----NGMRRDWLIRSQATGHIFARATSTW 215 (293)
Q Consensus 166 ~I~y~r~p~~gD~V~I~T~v~~~~--~----~~~~R~f~I~d~~~Gelia~a~s~w 215 (293)
+++|.+|.+.||+|+++..+.... + .....+..+.| ++|+++.++....
T Consensus 617 ~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~n-q~G~~V~~~~~~~ 671 (675)
T PRK11563 617 NLRFLTPVKPGDTIQVRLTCKRKTPRRQAPYGVVRWDVEVTN-QDGELVATYDILT 671 (675)
T ss_pred eEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEE-CCCCEEEEEEEHH
Confidence 799999999999999999987652 1 23566677887 8899988887644
No 71
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=61.88 E-value=26 Score=36.72 Aligned_cols=51 Identities=8% Similarity=-0.069 Sum_probs=39.2
Q ss_pred eEEEEcccCCCCCEEEEEEEEeeeC--C---c-EEEEEEEEEEcCCCcEEEEEEEEEE
Q 022737 165 MQVEIDHYPIWGEVVEIDTWVGASG--K---N-GMRRDWLIRSQATGHIFARATSTWV 216 (293)
Q Consensus 165 ~~I~y~r~p~~gD~V~I~T~v~~~~--~---~-~~~R~f~I~d~~~Gelia~a~s~wV 216 (293)
.+++|.+|.+.||+|+++..+.... + . ....+..+.| ++|+.+.+++....
T Consensus 604 ~~~rF~~PV~~GDtl~~~~~V~e~~~~~~~~~g~v~~~~~v~n-q~G~~Vl~~~~~~l 660 (663)
T TIGR02278 604 ENLRFLEPVGPGDTIQVRLTVKRKTPRDEKTYGVVEWAAEVVN-QNGEPVATYDVLTL 660 (663)
T ss_pred ceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEc-CCCCEEEEEEEHHh
Confidence 4899999999999999999987542 1 1 3556677887 78999888876543
No 72
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=61.35 E-value=4.5 Score=31.96 Aligned_cols=24 Identities=13% Similarity=0.059 Sum_probs=20.8
Q ss_pred cccccCcccCCc-----chhhHHHHHhhc
Q 022737 248 EDVPEKISKLDD-----TAKYVNSDLKVN 271 (293)
Q Consensus 248 ~~~~vr~sdlD~-----Na~Yi~~~~d~l 271 (293)
.+.++|++|+|. |++|++|+.++.
T Consensus 3 ~~~~vr~~d~D~~Ghv~~~~y~~~~~~a~ 31 (126)
T TIGR02799 3 WPIRVYYEDTDAGGVVYHANYLKFMERAR 31 (126)
T ss_pred ceEEEEEeccCCCceEEechHHHHHHHHH
Confidence 357789999998 999999998775
No 73
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=61.20 E-value=4.3 Score=31.34 Aligned_cols=23 Identities=17% Similarity=0.143 Sum_probs=20.1
Q ss_pred cccCcccCCc-----chhhHHHHHhhch
Q 022737 250 VPEKISKLDD-----TAKYVNSDLKVNK 272 (293)
Q Consensus 250 ~~vr~sdlD~-----Na~Yi~~~~d~lp 272 (293)
..++++|+|. |+.|+.|+.++..
T Consensus 2 ~~V~~~d~D~~G~v~~~~y~~~~~~a~~ 29 (117)
T TIGR00051 2 VRVYYEDTDAQGIVYHANYLRYCERART 29 (117)
T ss_pred EEEEEeccCCCcEEEehHHHHHHHHHHH
Confidence 4689999998 9999999999853
No 74
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=58.90 E-value=1.1e+02 Score=27.22 Aligned_cols=54 Identities=7% Similarity=0.012 Sum_probs=40.4
Q ss_pred EeEeEEEEcc-cCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEE
Q 022737 162 VSRMQVEIDH-YPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (293)
Q Consensus 162 V~r~~I~y~r-~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (293)
-..+.|.|++ |..-+|-+.++++....+.-.+.-+-+|+| ++|+++|.+...-+
T Consensus 200 tld~ti~f~~~p~~~~~Wl~~~~~~~~~~~Gr~~~~~~l~d-~~G~lvA~~~Q~~l 254 (255)
T PF13622_consen 200 TLDHTIHFHRLPFDGDEWLLLEARSPRAGNGRALMEGRLWD-EDGRLVASSRQEAL 254 (255)
T ss_dssp EEEEEEEECSHCCTTTS-EEEEEEEEEEETTEEEEEEEEEE-TTS-EEEEEEEEEE
T ss_pred cceeEEEEEeCCccCCceEEEEEEEeEeCCCEEEEEEEEEC-CCCCEEEEEEEEee
Confidence 6778888744 444588999999887776666777788998 89999999987654
No 75
>PLN02864 enoyl-CoA hydratase
Probab=58.35 E-value=68 Score=30.32 Aligned_cols=52 Identities=10% Similarity=0.088 Sum_probs=36.6
Q ss_pred EEEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEE
Q 022737 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (293)
Q Consensus 160 wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (293)
..+.+++++|.+|...||+|.++.|.. ++ ... |.+...++|+++..|..+..
T Consensus 253 ~~~~~~~~rF~~PV~pGdtl~~~~~~~--~~-~v~--~~~~~~~~g~~vl~G~a~~~ 304 (310)
T PLN02864 253 TAVKTISGRFLLHVYPGETLVTEMWLE--GL-RVI--YQTKVKERNKAVLSGYVDLR 304 (310)
T ss_pred ceEEEEEEEEcCCccCCCEEEEEEEeC--CC-EEE--EEEEEecCCeEEEEEEEEEe
Confidence 356789999999999999999888863 22 233 33332267888887766543
No 76
>PRK13693 (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional
Probab=57.83 E-value=1.1e+02 Score=25.32 Aligned_cols=52 Identities=12% Similarity=0.091 Sum_probs=35.2
Q ss_pred eEeEEEEcccCCCC-C----EEEEEEEEeee--CCcEEEEEEEEEEcCCCcEEEEEEEEE
Q 022737 163 SRMQVEIDHYPIWG-E----VVEIDTWVGAS--GKNGMRRDWLIRSQATGHIFARATSTW 215 (293)
Q Consensus 163 ~r~~I~y~r~p~~g-D----~V~I~T~v~~~--~~~~~~R~f~I~d~~~Gelia~a~s~w 215 (293)
.+++++|.+|...| | +++++..+... ++........+.+ ++++++.+|..+.
T Consensus 81 ~~~~~rF~~pv~~g~D~~~~~l~~~~~V~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~ 139 (142)
T PRK13693 81 TEYNVRFTAVVPVPNDGKGAELVFNGRVKSVDPESKSVTIALTATT-GGKKIFGRAIASA 139 (142)
T ss_pred EEEEEEecccEECCCCccceEEEEEEEEEEeccCCcEEEEEEEEEE-CCcEEEEEEEEEE
Confidence 47899999999865 3 88888888765 3334555566665 5555666665543
No 77
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=57.13 E-value=5.5 Score=31.97 Aligned_cols=25 Identities=20% Similarity=0.062 Sum_probs=21.6
Q ss_pred cccccCcccCCc-----chhhHHHHHhhch
Q 022737 248 EDVPEKISKLDD-----TAKYVNSDLKVNK 272 (293)
Q Consensus 248 ~~~~vr~sdlD~-----Na~Yi~~~~d~lp 272 (293)
.+.+++++|+|. |++|++|+.++.-
T Consensus 5 ~~~~Vr~~d~D~~Ghv~~~~y~~~~e~a~~ 34 (130)
T PRK10800 5 WPVRVYYEDTDAGGVVYHASYVAFYERART 34 (130)
T ss_pred EEEEEeehhcCCCCeEehHHHHHHHHHHHH
Confidence 457789999998 9999999998864
No 78
>PF02551 Acyl_CoA_thio: Acyl-CoA thioesterase; InterPro: IPR003703 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH). They consequently have the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. They may also be involved in the metabolic regulation of peroxisome proliferation. Thioesters play a central role in cells as they participate in metabolism, membrane synthesis, signal transduction, and gene regulation. Thioesterases catalyse the hydrolysis of thioesters to the thiol and carboxylic acid components. Many thioesterases have a hot dog fold, including YciA from Escherichia coli and its close sequence homologue HI0827 from Haemophilus influenzae (HiYciA) []. In Helicobacter pylori, YbgC also belongs to the hot-dog family of proteins, with a epsilongamma tetrameric arrangement []. YbgC proteins are bacterial acyl-CoA thioesterases associated with the Tol-Pal system. This system is important for cell envelope integrity and is part of the cell division machinery. However, the E. coli thioesterase II reveals a new tertiary fold: a 'double hot dog'. It has an internal repeat with a basic unit that is structurally similar to the recently described beta-hydroxydecanoyl thiol ester dehydrase []. ; GO: 0016291 acyl-CoA thioesterase activity, 0006637 acyl-CoA metabolic process; PDB: 1C8U_B 1TBU_B 3U0A_B.
Probab=57.07 E-value=88 Score=26.06 Aligned_cols=98 Identities=16% Similarity=0.085 Sum_probs=52.3
Q ss_pred EEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEEEEE-
Q 022737 107 VVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWV- 185 (293)
Q Consensus 107 ~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~T~v- 185 (293)
+-+|-.+.=++...-+...+.|+.|.-.-. -.+- .+.+...++.- -..+.|=|+||++.+|-+.-.+.-
T Consensus 32 vW~ra~~~~p~d~~~h~~~laY~SD~~~L~--------tal~-~H~~~~~~~~v-SlDHs~wFHrpfr~ddWlLY~~~sp 101 (131)
T PF02551_consen 32 VWVRANGILPDDPRIHSCALAYASDFTLLD--------TALQ-PHGFGFPKFQV-SLDHSMWFHRPFRADDWLLYAIESP 101 (131)
T ss_dssp CCCCCCSTS-TTHCCCCCHHHHHCCCCCGG--------GGGC-CGCCCCCCEEE-EEEEEEEE-S--BTTS-EEEEEEEE
T ss_pred hhHHhCCCCCCchhHhHHHHHHHhHHhHHH--------hhhc-cccccccccEE-ecceeEEEcCCCCCCCCEEEEEEcC
Confidence 445555555555555566667766631111 0000 01112233333 677889999999999988777665
Q ss_pred eeeCCcEEEEEEEEEEcCCCcEEEEEEEEE
Q 022737 186 GASGKNGMRRDWLIRSQATGHIFARATSTW 215 (293)
Q Consensus 186 ~~~~~~~~~R~f~I~d~~~Gelia~a~s~w 215 (293)
...+...+.+ =.+++.++|+++|.+..+-
T Consensus 102 ~A~~~Rgl~~-G~~f~~q~G~Lvas~~QEG 130 (131)
T PF02551_consen 102 SASGGRGLVR-GRFFDTQDGELVASVVQEG 130 (131)
T ss_dssp EEETTEEEEE-ECCEEECTTEEEEEEEEEE
T ss_pred ccccCccccc-CceEecCCCCEEEEEecCC
Confidence 4445555544 4455227999999977654
No 79
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=55.87 E-value=68 Score=29.05 Aligned_cols=55 Identities=5% Similarity=-0.135 Sum_probs=41.9
Q ss_pred EEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEE
Q 022737 161 VVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (293)
Q Consensus 161 VV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (293)
.-..+.+.|+++...+|-+..+++....+.-+..-+=.|+| ++|+++|.+...-+
T Consensus 215 aSldhtv~fh~~~~~~~W~l~~~~s~~~~~Grg~~~~~l~d-~~G~lvAs~~Qe~l 269 (271)
T TIGR00189 215 ASLDHSIWFHRPFRADDWLLYKCSSPSASGSRGLVEGKIFT-RDGVLIASTVQEGL 269 (271)
T ss_pred EeeeeeEEEeCCCCCCeeEEEEEEeccccCCceEEEEEEEC-CCCCEEEEEEeeee
Confidence 46678899999888899999988876654443333467887 89999999876644
No 80
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=55.78 E-value=1.6e+02 Score=27.88 Aligned_cols=105 Identities=14% Similarity=0.164 Sum_probs=69.6
Q ss_pred EEEEeeecCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCEEEEEEE
Q 022737 105 QTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTW 184 (293)
Q Consensus 105 ~~~~VR~~D~D~~GhV~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~V~I~T~ 184 (293)
+.+.||...-=++...-+..++-|+.|.-.-... +.-.|.+ +...+..-+=..+.+-|+||.+.+|-+.-.+.
T Consensus 178 ~~vWira~~~~pdd~~~~~~lLay~SD~~ll~ta---l~~Hg~~----~~~~~~~~aSLDHs~wFhrp~~~ddWlLy~~~ 250 (289)
T COG1946 178 QQVWIRARGELPDDPRLHQALLAYLSDFTLLDTA---LQPHGLG----FLTPGIQVASLDHSMWFHRPFRLDDWLLYAQE 250 (289)
T ss_pred eeEEEEcCCCCCCCHHHHHHHHHHhccchhhhhh---hccCCCc----cccCcceEeeccceEEEeccccCCCEEEEEee
Confidence 4577777766667777777788888775422210 1111222 12445566667789999999999998887776
Q ss_pred Eeee-CCcEEEEEEEEEEcCCCcEEEEEEEEEEEE
Q 022737 185 VGAS-GKNGMRRDWLIRSQATGHIFARATSTWVMM 218 (293)
Q Consensus 185 v~~~-~~~~~~R~f~I~d~~~Gelia~a~s~wV~v 218 (293)
.... +...+.|. .+++ ++|+++|......++-
T Consensus 251 sp~A~~~rgl~~G-~lf~-r~G~LiA~~~QEG~~r 283 (289)
T COG1946 251 SPSASGGRGLVRG-QLFD-RDGQLIASVVQEGLIR 283 (289)
T ss_pred CCcccCCcceeee-EEEc-CCCCEEEEEeeeEEEe
Confidence 6443 44455553 5665 8999999988877764
No 81
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=55.51 E-value=5.5 Score=32.91 Aligned_cols=31 Identities=13% Similarity=0.074 Sum_probs=24.5
Q ss_pred ccccccCcccCCc-----chhhHHHHHhhchHhHHhh
Q 022737 247 IEDVPEKISKLDD-----TAKYVNSDLKVNKHQTKRL 278 (293)
Q Consensus 247 ~~~~~vr~sdlD~-----Na~Yi~~~~d~lp~e~~~~ 278 (293)
..+.+|++.|+|. |++|+.|+.++- .++++.
T Consensus 7 ~~~~~V~~~d~D~~GhV~~a~Yl~~fE~ar-~~~l~~ 42 (137)
T COG0824 7 STPIRVRYEDTDAMGHVNNANYLVFFEEAR-TEFLRA 42 (137)
T ss_pred EEEEEEEhhhcCcccEEecchHHHHHHHHH-HHHHHH
Confidence 3467899999998 999999998876 445543
No 82
>cd03450 NodN NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.
Probab=52.01 E-value=1.4e+02 Score=24.92 Aligned_cols=28 Identities=11% Similarity=-0.228 Sum_probs=23.4
Q ss_pred EEEeEeEEEEcccCCCCCEEEEEEEEee
Q 022737 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGA 187 (293)
Q Consensus 160 wVV~r~~I~y~r~p~~gD~V~I~T~v~~ 187 (293)
..+...+++|.+|+..||+|+++..+..
T Consensus 85 ~~~g~~~~rF~~PV~~GDtl~~~~~V~~ 112 (149)
T cd03450 85 VNYGLDKVRFPAPVPVGSRVRGRFTLLS 112 (149)
T ss_pred EEeeccEEEeCcceeCCcEEEEEEEEEE
Confidence 3445568999999999999999998865
No 83
>PLN02868 acyl-CoA thioesterase family protein
Probab=44.54 E-value=73 Score=31.09 Aligned_cols=56 Identities=9% Similarity=-0.098 Sum_probs=47.5
Q ss_pred EEEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEE
Q 022737 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVM 217 (293)
Q Consensus 160 wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~ 217 (293)
..+..+++.|.++...+..|++++....-|+.+..|.-..+ ++|++++.+...+..
T Consensus 181 ~~~~s~~~~Fl~~~~~~~pv~~~V~~lr~Grs~~~r~v~~~--Q~g~~~~~~~~sf~~ 236 (413)
T PLN02868 181 KLVHSLHAYFLLVGDINLPIIYQVERIRDGHNFATRRVDAI--QKGKVIFTLFASFQK 236 (413)
T ss_pred CCceEeeeeecCCCCCCCCEEEEEEEEcCCCceEeeEEEEE--ECCeeEEEEeecccc
Confidence 35678999999999998899999999999999999988887 678988888766543
No 84
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=41.69 E-value=1.3e+02 Score=27.83 Aligned_cols=58 Identities=9% Similarity=-0.134 Sum_probs=43.8
Q ss_pred eEEEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEEEE
Q 022737 159 IWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVM 217 (293)
Q Consensus 159 ~wVV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~wV~ 217 (293)
.-.-..+.|.|+++.+.+|-+..+++....+.-+..-.=.|++ ++|+++|.+...-++
T Consensus 225 ~~aSLdhsi~Fh~~~~~d~W~L~~~~s~~a~~gr~~~~g~i~~-~~G~LvAs~~Qegl~ 282 (286)
T PRK10526 225 QIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYT-QDGVLVASTVQEGVM 282 (286)
T ss_pred eEEeeeEeEEEeCCCCCCceEEEEEECCcccCCceEEEEEEEC-CCCCEEEEEEeeEEE
Confidence 3456778999999999999999998886543333322347887 899999999887665
No 85
>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A ....
Probab=41.45 E-value=15 Score=28.75 Aligned_cols=25 Identities=16% Similarity=0.181 Sum_probs=17.5
Q ss_pred cCcccCCc----chhhHHHHHhhchHhHHh
Q 022737 252 EKISKLDD----TAKYVNSDLKVNKHQTKR 277 (293)
Q Consensus 252 vr~sdlD~----Na~Yi~~~~d~lp~e~~~ 277 (293)
||++|+|. |++|++|+.++. .+++.
T Consensus 1 Vr~~D~D~ghv~n~~Y~~~~e~ar-~~~~~ 29 (121)
T PF13279_consen 1 VRWSDTDNGHVNNARYLRYFEEAR-EEFLE 29 (121)
T ss_dssp --GGGB-TSSB-HHHHHHHHHHHH-HHHHH
T ss_pred CCHHHccCCeEcHHHHHHHHHHHH-HHHHH
Confidence 68899993 999999999876 45554
No 86
>PF11456 DUF3019: Protein of unknown function (DUF3019); InterPro: IPR021559 This is a bacterial family of uncharacterised proteins.
Probab=32.07 E-value=1.3e+02 Score=23.78 Aligned_cols=34 Identities=21% Similarity=0.373 Sum_probs=25.6
Q ss_pred EEEEEEcCCCcEEEEEEEEEEEEeccCCccccCC
Q 022737 196 DWLIRSQATGHIFARATSTWVMMNQQTRRLSKIP 229 (293)
Q Consensus 196 ~f~I~d~~~Gelia~a~s~wV~vD~~trRpvriP 229 (293)
.|.++|.+++..+|.+......+..++||-.|-|
T Consensus 66 ~f~L~~~~~~~~la~~~v~V~~~~~k~Rrr~r~p 99 (102)
T PF11456_consen 66 QFSLRDSDTGQPLAQVKVKVTWVSPKVRRRRRNP 99 (102)
T ss_pred EEEEEeCCCCcEEEEEEEEEEEeccCcCCccCCC
Confidence 3788887788889988877777767777766544
No 87
>PLN02868 acyl-CoA thioesterase family protein
Probab=26.07 E-value=1.8e+02 Score=28.30 Aligned_cols=54 Identities=6% Similarity=-0.172 Sum_probs=41.4
Q ss_pred EEeEeEEEEcccCCCCCEEEEEEEEeeeCCcEEEEEEEEEEcCCCcEEEEEEEEE
Q 022737 161 VVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTW 215 (293)
Q Consensus 161 VV~r~~I~y~r~p~~gD~V~I~T~v~~~~~~~~~R~f~I~d~~~Gelia~a~s~w 215 (293)
.-..+.|.|+++.+.+|-+..+++....+.-+..-.=.|++ ++|+++|.+...-
T Consensus 358 aSLdhsi~Fh~~~~~d~W~l~~~~s~~a~~gr~~~~g~l~~-~~G~LvAs~~Qe~ 411 (413)
T PLN02868 358 LSLDHSMWFHRPFRADDWLLFVIVSPAAHNGRGFATGHMFN-RKGELVVSLTQEA 411 (413)
T ss_pred EEcceeEEEecCCCCCceEEEEEECCccCCCcceEEEEEEC-CCCCEEEEEEeee
Confidence 34458999999999999999998887764444433467887 8999999987654
No 88
>KOG2763 consensus Acyl-CoA thioesterase [Lipid transport and metabolism]
Probab=24.34 E-value=3.3e+02 Score=26.56 Aligned_cols=71 Identities=17% Similarity=0.171 Sum_probs=47.6
Q ss_pred eEEEeE-eEEEEcccCCCCC-EEEEEEEEeeeCCcEEEEEEEEE--EcC--CCcEEEEEEEEEEEEeccCCccccCCH
Q 022737 159 IWVVSR-MQVEIDHYPIWGE-VVEIDTWVGASGKNGMRRDWLIR--SQA--TGHIFARATSTWVMMNQQTRRLSKIPA 230 (293)
Q Consensus 159 ~wVV~r-~~I~y~r~p~~gD-~V~I~T~v~~~~~~~~~R~f~I~--d~~--~Gelia~a~s~wV~vD~~trRpvriP~ 230 (293)
..|..+ -.|+|.+++.-|+ .+.+.-.+.-.++.++.-.-.+. |.. ...++-.|..++|--|..++ +.++++
T Consensus 60 ~~VtAsV~~i~f~~~~~~~~~d~i~~a~Vt~a~~sSMEv~i~V~q~~~~~~~~~~~~kA~f~fVard~~~~-~~~l~~ 136 (357)
T KOG2763|consen 60 TIVTASVDRIDFEKPSEVGQVDIIIVAKVTWAGKSSMEVSIYVMQEDLATGEKSLVLKATFTFVARDATNG-KAPLNG 136 (357)
T ss_pred EEEEeeEEEEEeeccccccceeEEEEEEEEeccccceEEEEEEEEehhccchhhheeeeEEEEEEecCCCC-ccccCC
Confidence 444444 4789999999985 44444555557777776544443 222 34578889999999998888 777754
No 89
>PRK05174 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; Validated
Probab=21.57 E-value=5.2e+02 Score=22.17 Aligned_cols=82 Identities=10% Similarity=-0.185 Sum_probs=51.7
Q ss_pred cCHHHHHHHHHHHHHHhHHhhccccCCCCcchhhhcCCeeEEEeEeEEEEcccCCCCCE-EEEEEEEeeeC---CcEEEE
Q 022737 120 ATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEV-VEIDTWVGASG---KNGMRR 195 (293)
Q Consensus 120 V~~~~yl~~~qeaa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~I~y~r~p~~gD~-V~I~T~v~~~~---~~~~~R 195 (293)
+--.-.++.|-++...++ +.. ...+.+..+.--+.+|+++...||+ ++++..+.... +.....
T Consensus 78 mPG~L~iEamAQ~~~~~~--------~~~-----~~~~~g~l~g~~~~kfr~~v~Pgd~~l~l~v~i~~~~~~~~~~~~~ 144 (172)
T PRK05174 78 MPGCLGLDAMWQLVGFYL--------GWL-----GGPGKGRALGVGEVKFTGQVLPTAKKVTYEIDIKRVINRKLVMGIA 144 (172)
T ss_pred CchHHHHHHHHHHHHHHH--------hcc-----cccCceEEeeccEEEECccCcCCCEEEEEEEEEEEEecCCCCEEEE
Confidence 333456667777665543 110 1122245556668999999999998 89988887752 334455
Q ss_pred EEEEEEcCCCcEEEEEEEEEE
Q 022737 196 DWLIRSQATGHIFARATSTWV 216 (293)
Q Consensus 196 ~f~I~d~~~Gelia~a~s~wV 216 (293)
+-.++ .+|+++++|+-.-+
T Consensus 145 ~~~i~--v~g~~va~a~~~~l 163 (172)
T PRK05174 145 DGRVL--VDGEEIYTAKDLKV 163 (172)
T ss_pred EEEEE--ECCEEEEEEEeeEE
Confidence 55566 47899988865444
Done!