AmiGO: BLAST Results


BLAST match view associations BLAST with EIF3G2 EIF3G2 EIF3G2 AT5G06000	protein from Arabidopsis thaliana	3.1e-90
BLAST match view associations BLAST with EIF3G1 EIF3G1 EIF3G1 AT3G11400	protein from Arabidopsis thaliana	4.8e-71
BLAST match view associations BLAST with eif3g eif3g eif3g Eukaryotic translation initiation factor 3 subunit G	protein from Xenopus (Silurana) tropicalis	1.2e-47
BLAST match view associations BLAST with eif3g-a eif3g-a eif3g-a Eukaryotic translation initiation factor 3 subunit G-A	protein from Xenopus laevis	3.3e-47
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Bos taurus	6.9e-47
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Canis lupus familiaris	6.9e-47
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Homo sapiens	6.9e-47
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Sus scrofa	6.9e-47
BLAST match view associations BLAST with Eif3g Eif3g Eif3g eukaryotic translation initiation factor 3, subunit G	protein from Mus musculus	6.9e-47
BLAST match view associations BLAST with eif3g-b eif3g-b eif3g-b Eukaryotic translation initiation factor 3 subunit G-B	protein from Xenopus laevis	8.8e-47
BLAST match view associations BLAST with Eif3g Eif3g Eif3g eukaryotic translation initiation factor 3, subunit G	gene from Rattus norvegicus	1.1e-46
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Bos taurus	1.4e-46
BLAST match view associations BLAST with eif3g eif3g eif3g eukaryotic translation initiation factor 3, subunit G	gene_product from Danio rerio	2.3e-46
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Homo sapiens	1.2e-40
BLAST match view associations BLAST with CG8636 CG8636 CG8636	protein from Drosophila melanogaster	2.3e-39
BLAST match view associations BLAST with TIF35 TIF35 TIF35 Eukaryotic translation initiation factor 3 subunit G	protein from Magnaporthe oryzae 70-15	1.7e-38
BLAST match view associations BLAST with CG10881 CG10881 CG10881	protein from Drosophila melanogaster	3.9e-37
BLAST match view associations BLAST with TIF35 TIF35 TIF35	gene_product from Candida albicans	5.4e-31
BLAST match view associations BLAST with eif-3.G eif-3.G eif-3.G	gene from Caenorhabditis elegans	7.6e-29
BLAST match view associations BLAST with TIF35 TIF35 TIF35 eIF3g subunit of the eukaryotic translation initiation factor 3 (eIF3)	gene from Saccharomyces cerevisiae	1.5e-28
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Homo sapiens	1.2e-26
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Homo sapiens	3.6e-25
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Homo sapiens	5.6e-25
BLAST match view associations BLAST with eif3G eif3G eif3G eukaryotic translation initiation factor 3 (eIF3) subunit G	gene from Dictyostelium discoideum	6.9e-23
BLAST match view associations BLAST with MAL8P1.83 MAL8P1.83 MAL8P1.83 eukaryotictranslation initiation factor, putative	gene from Plasmodium falciparum	4.1e-21
BLAST match view associations BLAST with MAL8P1.83 MAL8P1.83 MAL8P1.83 Eukaryotic translation initiation factor 3 subunit G	protein from Plasmodium falciparum 3D7	4.1e-21
BLAST match view associations BLAST with zgc:112425 zgc:112425 zgc:112425	gene_product from Danio rerio	5.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Gallus gallus	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Gallus gallus	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Gallus gallus	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Canis lupus familiaris	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Canis lupus familiaris	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Sus scrofa	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Pongo abelii	9.7e-11
BLAST match view associations BLAST with rbm8A rbm8A rbm8A RNA-binding motif protein 8A	gene from Dictyostelium discoideum	1.3e-10
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	1.7e-10
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Cricetulus griseus	1.7e-10
BLAST match view associations BLAST with cirbp-b cirbp-b cirbp-b Cold-inducible RNA-binding protein B	protein from Xenopus laevis	1.7e-10
BLAST match view associations BLAST with Cirbp Cirbp Cirbp cold inducible RNA binding protein	protein from Mus musculus	1.7e-10
BLAST match view associations BLAST with Cirbp Cirbp Cirbp cold inducible RNA binding protein	gene from Rattus norvegicus	1.7e-10
BLAST match view associations BLAST with TIA1 TIA1 TIA1 Nucleolysin TIA-1 isoform p40	protein from Homo sapiens	4.5e-10
BLAST match view associations BLAST with TRA2A TRA2A TRA2A Transformer-2 protein homolog alpha	protein from Homo sapiens	4.9e-10
BLAST match view associations BLAST with TRA2A TRA2A TRA2A cDNA FLJ50689, highly similar to Transformer-2 protein homolog	protein from Homo sapiens	4.9e-10
BLAST match view associations BLAST with cirbp cirbp cirbp cold inducible RNA binding protein	gene_product from Danio rerio	5.6e-10
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Bos taurus	5.8e-10
BLAST match view associations BLAST with cirbp cirbp cirbp Cold-inducible RNA-binding protein	protein from Xenopus (Silurana) tropicalis	6.3e-10
BLAST match view associations BLAST with R09B3.3 R09B3.3 R09B3.3	gene from Caenorhabditis elegans	1.1e-09
BLAST match view associations BLAST with R09B3.3 R09B3.3 R09B3.3 Protein R09B3.3	protein from Caenorhabditis elegans	1.1e-09
BLAST match view associations BLAST with cirbp cirbp cirbp Cold-inducible RNA-binding protein	protein from Rana catesbeiana	1.4e-09
BLAST match view associations BLAST with TRA2A TRA2A TRA2A Uncharacterized protein	protein from Gallus gallus	2.4e-09
BLAST match view associations BLAST with cirbp-a cirbp-a cirbp-a Cold-inducible RNA-binding protein A	protein from Xenopus laevis	2.4e-09
BLAST match view associations BLAST with AT3G14100 AT3G14100 AT3G14100	protein from Arabidopsis thaliana	2.4e-09
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	3.1e-09
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	3.1e-09
BLAST match view associations BLAST with RBM3 RBM3 RBM3 Uncharacterized protein	protein from Sus scrofa	5.2e-09
BLAST match view associations BLAST with CIRBP CIRBP CIRBP cDNA FLJ52850, moderately similar to Cold-inducible RNA-binding protein	protein from Homo sapiens	5.4e-09
BLAST match view associations BLAST with fne fne fne found in neurons	protein from Drosophila melanogaster	6.3e-09
BLAST match view associations BLAST with F6RBQ9 F6RBQ9 F6RBQ9 Uncharacterized protein	protein from Bos taurus	6.7e-09
BLAST match view associations BLAST with RBM3 RBM3 RBM3 Uncharacterized protein	protein from Canis lupus familiaris	6.7e-09
BLAST match view associations BLAST with elav elav elav embryonic lethal abnormal vision	protein from Drosophila melanogaster	6.9e-09
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	8.7e-09
BLAST match view associations BLAST with Rbm3 Rbm3 Rbm3 RNA binding motif protein 3	protein from Mus musculus	8.8e-09
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 Uncharacterized protein	protein from Gallus gallus	9.3e-09
BLAST match view associations BLAST with UBP1A UBP1A UBP1A AT1G54080	protein from Arabidopsis thaliana	9.5e-09
BLAST match view associations BLAST with PAB2 PAB2 PAB2 AT4G34110	protein from Arabidopsis thaliana	1.1e-08
BLAST match view associations BLAST with PF14_0057 PF14_0057 PF14_0057 RNA binding protein, putative	gene from Plasmodium falciparum	1.1e-08
BLAST match view associations BLAST with RBM3 RBM3 RBM3 Putative RNA-binding protein 3	protein from Homo sapiens	1.1e-08
BLAST match view associations BLAST with PF14_0057 PF14_0057 PF14_0057 RNA binding protein, putative	protein from Plasmodium falciparum 3D7	1.1e-08
BLAST match view associations BLAST with elavl4 elavl4 elavl4 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	gene_product from Danio rerio	1.1e-08
BLAST match view associations BLAST with TIA1 TIA1 TIA1 Uncharacterized protein	protein from Bos taurus	1.3e-08
BLAST match view associations BLAST with TIA1 TIA1 TIA1 Nucleolysin TIA-1 isoform p40	protein from Homo sapiens	1.3e-08
BLAST match view associations BLAST with TIA1 TIA1 TIA1 Nucleolysin TIA-1 isoform p40	protein from Homo sapiens	1.3e-08
BLAST match view associations BLAST with Tia1 Tia1 Tia1 cytotoxic granule-associated RNA binding protein 1	protein from Mus musculus	1.3e-08
BLAST match view associations BLAST with Rbp9 Rbp9 Rbp9 RNA-binding protein 9	protein from Drosophila melanogaster	1.3e-08
BLAST match view associations BLAST with TIA1 TIA1 TIA1 Uncharacterized protein	protein from Canis lupus familiaris	1.4e-08
BLAST match view associations BLAST with tia1l tia1l tia1l cytotoxic granule-associated RNA binding protein 1, like	gene_product from Danio rerio	2.3e-08
BLAST match view associations BLAST with Rbm3 Rbm3 Rbm3 RNA binding motif (RNP1, RRM) protein 3	gene from Rattus norvegicus	2.5e-08
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 ELAV-like 1 (Hu antigen R)	protein from Sus scrofa	2.7e-08
BLAST match view associations BLAST with tra2a tra2a tra2a transformer-2 alpha	gene_product from Danio rerio	2.7e-08
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 ELAV (Embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	protein from Bos taurus	3.6e-08
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 Uncharacterized protein	protein from Gallus gallus	3.6e-08
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 ELAV-like protein 1	protein from Homo sapiens	3.6e-08
BLAST match view associations BLAST with Elavl1 Elavl1 Elavl1 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)	protein from Mus musculus	3.6e-08
BLAST match view associations BLAST with Elavl1 Elavl1 Elavl1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	gene from Rattus norvegicus	3.6e-08
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 ELAV (Embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	protein from Bos taurus	3.6e-08
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 Uncharacterized protein	protein from Canis lupus familiaris	3.6e-08
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 ELAV-like protein 4	protein from Homo sapiens	3.7e-08
BLAST match view associations BLAST with Elavl4 Elavl4 Elavl4 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4	gene from Rattus norvegicus	3.7e-08
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022742
        (293 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2153659 - symbol:EIF3G2 "eukaryotic translatio...   900  3.1e-90   1
TAIR|locus:2080772 - symbol:EIF3G1 "eukaryotic translatio...   719  4.8e-71   1
UNIPROTKB|Q28CY2 - symbol:eif3g "Eukaryotic translation i...   498  1.2e-47   1
UNIPROTKB|Q6DJI8 - symbol:eif3g-a "Eukaryotic translation...   494  3.3e-47   1
UNIPROTKB|F2Z4J5 - symbol:EIF3G "Eukaryotic translation i...   491  6.9e-47   1
UNIPROTKB|E2RGG6 - symbol:EIF3G "Eukaryotic translation i...   491  6.9e-47   1
UNIPROTKB|O75821 - symbol:EIF3G "Eukaryotic translation i...   491  6.9e-47   1
UNIPROTKB|F1S3I3 - symbol:EIF3G "Eukaryotic translation i...   491  6.9e-47   1
MGI|MGI:1858258 - symbol:Eif3g "eukaryotic translation in...   491  6.9e-47   1
UNIPROTKB|Q641B2 - symbol:eif3g-b "Eukaryotic translation...   490  8.8e-47   1
RGD|1307191 - symbol:Eif3g "eukaryotic translation initia...   489  1.1e-46   1
UNIPROTKB|Q5RK09 - symbol:Eif3g "Eukaryotic translation i...   489  1.1e-46   1
UNIPROTKB|Q3ZC12 - symbol:EIF3G "Eukaryotic translation i...   488  1.4e-46   1
ZFIN|ZDB-GENE-040426-1076 - symbol:eif3g "eukaryotic tran...   486  2.3e-46   1
UNIPROTKB|K7ENA8 - symbol:EIF3G "Eukaryotic translation i...   432  1.2e-40   1
POMBASE|SPBC18H10.03 - symbol:tif35 "translation initiati...   427  4.2e-40   1
FB|FBgn0029629 - symbol:CG8636 species:7227 "Drosophila m...   420  2.3e-39   1
UNIPROTKB|A4RHN3 - symbol:TIF35 "Eukaryotic translation i...   242  1.7e-38   2
FB|FBgn0038796 - symbol:CG10881 species:7227 "Drosophila ...   399  3.9e-37   1
ASPGD|ASPL0000001581 - symbol:AN10765 species:162425 "Eme...   395  1.0e-36   1
CGD|CAL0003839 - symbol:TIF35 species:5476 "Candida albic...   341  5.4e-31   1
WB|WBGene00001230 - symbol:eif-3.G species:6239 "Caenorha...   235  7.6e-29   2
SGD|S000002837 - symbol:TIF35 "eIF3g subunit of the eukar...   318  1.5e-28   1
UNIPROTKB|K7EL20 - symbol:EIF3G "Eukaryotic translation i...   300  1.2e-26   1
UNIPROTKB|K7EP16 - symbol:EIF3G "Eukaryotic translation i...   286  3.6e-25   1
UNIPROTKB|K7ER90 - symbol:EIF3G "Eukaryotic translation i...   217  5.6e-25   2
DICTYBASE|DDB_G0279549 - symbol:eif3G "eukaryotic transla...   209  6.9e-23   2
GENEDB_PFALCIPARUM|MAL8P1.83 - symbol:MAL8P1.83 "eukaryot...   211  4.1e-21   2
UNIPROTKB|Q8IAZ3 - symbol:MAL8P1.83 "Eukaryotic translati...   211  4.1e-21   2
ZFIN|ZDB-GENE-050417-329 - symbol:zgc:112425 "zgc:112425"...   154  5.7e-11   1
UNIPROTKB|H9KZV5 - symbol:CIRBP "Uncharacterized protein"...   152  9.7e-11   1
UNIPROTKB|H9L0U4 - symbol:CIRBP "Uncharacterized protein"...   152  9.7e-11   1
UNIPROTKB|H9L3B3 - symbol:CIRBP "Uncharacterized protein"...   152  9.7e-11   1
UNIPROTKB|E2R6G2 - symbol:CIRBP "Uncharacterized protein"...   152  9.7e-11   1
UNIPROTKB|F6XHA7 - symbol:CIRBP "Uncharacterized protein"...   152  9.7e-11   1
UNIPROTKB|K7EJV5 - symbol:CIRBP "Cold-inducible RNA-bindi...   152  9.7e-11   1
UNIPROTKB|K7EMY9 - symbol:CIRBP "Cold-inducible RNA-bindi...   152  9.7e-11   1
UNIPROTKB|K7EPM4 - symbol:CIRBP "Cold-inducible RNA-bindi...   152  9.7e-11   1
UNIPROTKB|K7EQR7 - symbol:CIRBP "Cold-inducible RNA-bindi...   152  9.7e-11   1
UNIPROTKB|K7ER40 - symbol:CIRBP "Cold-inducible RNA-bindi...   152  9.7e-11   1
UNIPROTKB|Q14011 - symbol:CIRBP "Cold-inducible RNA-bindi...   152  9.7e-11   1
UNIPROTKB|F1S6R1 - symbol:CIRBP "Uncharacterized protein"...   152  9.7e-11   1
UNIPROTKB|Q5RF83 - symbol:CIRBP "Cold-inducible RNA-bindi...   152  9.7e-11   1
DICTYBASE|DDB_G0286007 - symbol:rbm8A "RNA-binding motif ...   151  1.3e-10   1
UNIPROTKB|K7ENX8 - symbol:CIRBP "Cold-inducible RNA-bindi...   150  1.7e-10   1
UNIPROTKB|P60826 - symbol:CIRBP "Cold-inducible RNA-bindi...   150  1.7e-10   1
UNIPROTKB|Q9DED4 - symbol:cirbp-b "Cold-inducible RNA-bin...   150  1.7e-10   1
MGI|MGI:893588 - symbol:Cirbp "cold inducible RNA binding...   150  1.7e-10   1
RGD|620756 - symbol:Cirbp "cold inducible RNA binding pro...   150  1.7e-10   1
UNIPROTKB|Q96B58 - symbol:TIA1 "TIA1 cytotoxic granule-as...   153  4.5e-10   1
UNIPROTKB|B4DQI6 - symbol:TRA2A "cDNA FLJ50614, highly si...   146  4.9e-10   1
UNIPROTKB|B4DUA9 - symbol:TRA2A "Transformer-2 protein ho...   146  4.9e-10   1
ZFIN|ZDB-GENE-030131-5841 - symbol:cirbp "cold inducible ...   155  5.6e-10   1
UNIPROTKB|Q3SZN4 - symbol:CIRBP "Uncharacterized protein"...   152  5.8e-10   1
UNIPROTKB|Q28IQ9 - symbol:cirbp "Cold-inducible RNA-bindi...   145  6.3e-10   1
WB|WBGene00011156 - symbol:R09B3.3 species:6239 "Caenorha...   143  1.1e-09   1
UNIPROTKB|O45713 - symbol:R09B3.3 "Protein R09B3.3" speci...   143  1.1e-09   1
UNIPROTKB|Q9PTX2 - symbol:cirbp "Cold-inducible RNA-bindi...   142  1.4e-09   1
UNIPROTKB|E1C875 - symbol:TRA2A "Uncharacterized protein"...   140  2.4e-09   1
UNIPROTKB|O93235 - symbol:cirbp-a "Cold-inducible RNA-bin...   140  2.4e-09   1
TAIR|locus:2087457 - symbol:AT3G14100 species:3702 "Arabi...   160  2.4e-09   1
UNIPROTKB|K7ELT6 - symbol:CIRBP "Cold-inducible RNA-bindi...   139  3.1e-09   1
UNIPROTKB|K7ELV6 - symbol:CIRBP "Cold-inducible RNA-bindi...   139  3.1e-09   1
UNIPROTKB|I3L5X7 - symbol:RBM3 "Uncharacterized protein" ...   137  5.2e-09   1
UNIPROTKB|B4E2X2 - symbol:CIRBP "Cold-inducible RNA-bindi...   152  5.4e-09   1
FB|FBgn0086675 - symbol:fne "found in neurons" species:72...   155  6.3e-09   1
UNIPROTKB|F6RBQ9 - symbol:F6RBQ9 "Uncharacterized protein...   136  6.7e-09   1
UNIPROTKB|E2R771 - symbol:RBM3 "Uncharacterized protein" ...   136  6.7e-09   1
FB|FBgn0260400 - symbol:elav "embryonic lethal abnormal v...   157  6.9e-09   1
UNIPROTKB|D6W5Y5 - symbol:CIRBP "Cold-inducible RNA-bindi...   152  8.7e-09   1
MGI|MGI:1099460 - symbol:Rbm3 "RNA binding motif protein ...   135  8.8e-09   1
UNIPROTKB|G3V6P6 - symbol:Rbm3 "Putative RNA-binding prot...   135  8.8e-09   1
UNIPROTKB|F1NLH0 - symbol:ELAVL4 "Uncharacterized protein...   154  9.3e-09   1
TAIR|locus:2014340 - symbol:UBP1A "oligouridylate-binding...   155  9.5e-09   1
TAIR|locus:2124261 - symbol:PAB2 "AT4G34110" species:3702...   157  1.1e-08   1
GENEDB_PFALCIPARUM|PF14_0057 - symbol:PF14_0057 "RNA bind...   134  1.1e-08   1
UNIPROTKB|P98179 - symbol:RBM3 "Putative RNA-binding prot...   134  1.1e-08   1
UNIPROTKB|Q8IM34 - symbol:PF14_0057 "RNA binding protein,...   134  1.1e-08   1
ZFIN|ZDB-GENE-990415-246 - symbol:elavl4 "ELAV (embryonic...   154  1.1e-08   1
UNIPROTKB|D4A6U8 - symbol:Tia1 "Protein Tia1" species:101...   153  1.3e-08   1
UNIPROTKB|Q0VBZ6 - symbol:TIA1 "TIA1 cytotoxic granule-as...   153  1.3e-08   1
UNIPROTKB|F8W8I6 - symbol:TIA1 "Nucleolysin TIA-1 isoform...   153  1.3e-08   1
UNIPROTKB|P31483 - symbol:TIA1 "Nucleolysin TIA-1 isoform...   153  1.3e-08   1
MGI|MGI:107914 - symbol:Tia1 "cytotoxic granule-associate...   153  1.3e-08   1
FB|FBgn0010263 - symbol:Rbp9 "RNA-binding protein 9" spec...   154  1.3e-08   1
UNIPROTKB|F1PWU8 - symbol:TIA1 "Uncharacterized protein" ...   153  1.4e-08   1
ZFIN|ZDB-GENE-030131-2167 - symbol:tia1l "cytotoxic granu...   150  2.3e-08   1
RGD|620145 - symbol:Rbm3 "RNA binding motif (RNP1, RRM) p...   131  2.5e-08   1
UNIPROTKB|D3K5N7 - symbol:ELAVL1 "ELAV (Embryonic lethal,...   149  2.7e-08   1
ZFIN|ZDB-GENE-040426-1391 - symbol:tra2a "transformer-2 a...   148  2.7e-08   1
UNIPROTKB|D4AAT0 - symbol:Elavl4 "ELAV-like protein 4" sp...   149  3.3e-08   1
UNIPROTKB|Q3ZCE2 - symbol:ELAVL1 "ELAV (Embryonic lethal,...   148  3.6e-08   1
UNIPROTKB|F1N9I5 - symbol:ELAVL1 "Uncharacterized protein...   148  3.6e-08   1
UNIPROTKB|Q15717 - symbol:ELAVL1 "ELAV-like protein 1" sp...   148  3.6e-08   1
MGI|MGI:1100851 - symbol:Elavl1 "ELAV (embryonic lethal, ...   148  3.6e-08   1
RGD|1308649 - symbol:Elavl1 "ELAV (embryonic lethal, abno...   148  3.6e-08   1
UNIPROTKB|A2VDK5 - symbol:ELAVL4 "Uncharacterized protein...   149  3.6e-08   1
UNIPROTKB|J9PAL3 - symbol:ELAVL4 "Uncharacterized protein...   149  3.6e-08   1
UNIPROTKB|B1APY9 - symbol:ELAVL4 "cDNA FLJ50619, highly s...   149  3.7e-08   1
RGD|1560027 - symbol:Elavl4 "ELAV (embryonic lethal, abno...   149  3.7e-08   1

WARNING:  Descriptions of 591 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:2153659 [details] [associations]
            symbol:EIF3G2 "eukaryotic translation initiation factor
            3G2" species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0003743
            "translation initiation factor activity" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0006413 "translational initiation"
            evidence=TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005852 "eukaryotic translation initiation factor 3 complex"
            evidence=ISS] [GO:0006333 "chromatin assembly or disassembly"
            evidence=RCA] [GO:0006606 "protein import into nucleus"
            evidence=RCA] [GO:0042991 "transcription factor import into
            nucleus" evidence=RCA] InterPro:IPR000504 InterPro:IPR001878
            InterPro:IPR012677 InterPro:IPR017334 Pfam:PF00076
            PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00343 SMART:SM00360
            EMBL:CP002688 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
            GO:GO:0003743 GO:GO:0005852 EMBL:AB017060 KO:K03248
            InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353
            HOGENOM:HOG000239560 HSSP:P11940 IPI:IPI00528477 RefSeq:NP_196219.3
            UniGene:At.20561 ProteinModelPortal:Q9FI86 SMR:Q9FI86 STRING:Q9FI86
            PRIDE:Q9FI86 EnsemblPlants:AT5G06000.1 GeneID:830487
            KEGG:ath:AT5G06000 TAIR:At5g06000 InParanoid:Q9FI86 OMA:KFNDEGK
            PhylomeDB:Q9FI86 ProtClustDB:CLSN2925586 Genevestigator:Q9FI86
            Uniprot:Q9FI86
        Length = 308

 Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
 Identities = 181/295 (61%), Positives = 218/295 (73%)

Query:     1 MSVSTQNPTQPKLRWSXXXXXXXXXXXXXXPPKQVIGPDENGVKKVIEYKFNDDGNKVKI 60
             M++ T   T+ KLRW               PPKQ+I PD+NGVKKVIEYKFN++  KVKI
Sbjct:     1 MAIDTIQKTK-KLRWGEIDEEEGDYDFLL-PPKQMISPDQNGVKKVIEYKFNEEDKKVKI 58

Query:    61 XXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPE 120
                 RV+K A   L+K+A+ERR+W KFGDA  E+  S LTM STE+I+LER RAPGS  E
Sbjct:    59 TTTTRVQKRA---LTKQAVERRSWNKFGDAAHEESSSYLTMRSTEDIILERIRAPGSNAE 115

Query:   121 ETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXX 180
             ++  +GDS++QLGK GAVLMVCR C KKGDHWTSRCP KDL +     +D+P        
Sbjct:   116 QSTVSGDSMSQLGKPGAVLMVCRLCQKKGDHWTSRCPQKDLLS----LMDEPLTAETSTS 171

Query:   181 XXXXT-KGTYVPPGMRAGAERT--GTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGA 237
                 T +  YVPP MR GA+R   G+DMR R+DENSVRVTNLSEDTR PDL+ELFRPFGA
Sbjct:   172 TITGTGRAAYVPPSMREGADRKAGGSDMRSRHDENSVRVTNLSEDTRGPDLMELFRPFGA 231

Query:   238 VSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRT 292
             V+R +VA+DQKT +SRGFGFV+FV++EDAQRAINKLNGYGYDNLILRVEW+TP+T
Sbjct:   232 VTRCHVAIDQKTSMSRGFGFVSFVSREDAQRAINKLNGYGYDNLILRVEWSTPKT 286


>TAIR|locus:2080772 [details] [associations]
            symbol:EIF3G1 "eukaryotic translation initiation factor
            3G1" species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0003743
            "translation initiation factor activity" evidence=ISS;TAS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0006413 "translational
            initiation" evidence=TAS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
            3 complex" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=RCA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=RCA] [GO:0006606 "protein import into nucleus"
            evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
            [GO:0051788 "response to misfolded protein" evidence=RCA]
            [GO:0080129 "proteasome core complex assembly" evidence=RCA]
            InterPro:IPR000504 InterPro:IPR001878 InterPro:IPR012677
            InterPro:IPR017334 Pfam:PF00076 PIRSF:PIRSF037949 PROSITE:PS50102
            SMART:SM00343 SMART:SM00360 GO:GO:0005886 EMBL:CP002686
            GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003743
            GO:GO:0005852 KO:K03248 OMA:SNLSEAM InterPro:IPR024675
            PANTHER:PTHR10352 Pfam:PF12353 IPI:IPI00938678
            RefSeq:NP_001154607.1 UniGene:At.25153 ProteinModelPortal:F4J6A1
            SMR:F4J6A1 PRIDE:F4J6A1 EnsemblPlants:AT3G11400.2 GeneID:820313
            KEGG:ath:AT3G11400 Uniprot:F4J6A1
        Length = 321

 Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
 Identities = 135/179 (75%), Positives = 151/179 (84%)

Query:   117 SKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXX 176
             +K +E+KA GD L+QLGKGGAVLMVCR C KKGDHWTS+CP+KDLAAP + FIDKP    
Sbjct:   141 TKADESKATGDGLSQLGKGGAVLMVCRICHKKGDHWTSKCPYKDLAAPTDVFIDKPPTGE 200

Query:   177 XXXXXXX--XTKGTYVPPGMRAGAERT--GTDMRRRNDENSVRVTNLSEDTREPDLLELF 232
                        K  YVPP MRAGA+R+  G+DMRRRNDENSVRVTNLSEDTREPDL+ELF
Sbjct:   201 SSTMSAAPGTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVRVTNLSEDTREPDLMELF 260

Query:   233 RPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 291
              PFGAV+RVYVA+DQKTG+SRGFGFVNFV++EDAQRAINKLNGYGYDNLILRVEWATPR
Sbjct:   261 HPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPR 319

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 80/147 (54%), Positives = 93/147 (63%)

Query:     1 MSVSTQNPTQPKLRWSXXXXXXXXXXXXXXPPKQVIGPDENGVKKVIEYKFNDDGNKVKI 60
             M++ +Q  T  K RW               PPKQVIGPDENG+K  IEYKFND+ NKVKI
Sbjct:     1 MTIDSQQKTS-KFRWGEMDEDEDLDFLL--PPKQVIGPDENGLKTTIEYKFNDEENKVKI 57

Query:    61 XXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPE 120
                 RVRKLA+ARL+KRA+ERRNW KFGDA  E+ GS LTMVSTEEILLERPRAPG +  
Sbjct:    58 TTRTRVRKLASARLNKRAMERRNWPKFGDAANEEAGSHLTMVSTEEILLERPRAPGDQLA 117

Query:   121 ETKAAGDSLAQLGKGGAVLMVCRTCGK 147
                 A  S+ +     A+  V   C K
Sbjct:   118 NHMLA--SIPEYELKCALTFVAANCTK 142


>UNIPROTKB|Q28CY2 [details] [associations]
            symbol:eif3g "Eukaryotic translation initiation factor 3
            subunit G" species:8364 "Xenopus (Silurana) tropicalis" [GO:0005852
            "eukaryotic translation initiation factor 3 complex" evidence=ISS]
            [GO:0006413 "translational initiation" evidence=ISS] [GO:0003743
            "translation initiation factor activity" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR017334
            Pfam:PF00076 PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 GO:GO:0006413 Gene3D:3.30.70.330 GO:GO:0003743
            eggNOG:COG0724 GO:GO:0005852 GeneTree:ENSGT00510000047802 KO:K03248
            HAMAP:MF_03006 InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353
            CTD:446311 HOVERGEN:HBG026850 HOGENOM:HOG000239560 EMBL:CR855811
            EMBL:BC158150 RefSeq:NP_001016749.1 UniGene:Str.41964
            ProteinModelPortal:Q28CY2 SMR:Q28CY2 STRING:Q28CY2
            Ensembl:ENSXETT00000047701 GeneID:549503 KEGG:xtr:549503
            Xenbase:XB-GENE-6070198 Bgee:Q28CY2 Uniprot:Q28CY2
        Length = 310

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 118/280 (42%), Positives = 164/280 (58%)

Query:    32 PKQVIGPDENG-VKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDA 90
             P++VI    NG +K + EYK ND+G K+KI    R  K+   + SK    R+NW KFG++
Sbjct:    45 PQEVI----NGKIKTITEYKLNDEGKKIKIV---RTFKIETLKASKVVAHRKNWKKFGNS 97

Query:    91 VREDVGSRL-TMVSTEEILLERPRAPGSKPE-ETKAAGDSLAQLGKGGAVLMVCRTCGKK 148
               +  G  + T   ++++L+       SK +   +   D + +L KG  ++  CR C  K
Sbjct:    98 EYDPPGPNVATTTVSDDVLMTFIT---SKEDLNNQEEEDPMNKL-KGQKIVS-CRIC--K 150

Query:   149 GDHWTSRCPFKDLAAPAETFI---------DK---PXXXXXXXXXXXXTKGTYVPPGMRA 196
             GDHWT+RCP+KD   P +  +         DK   P              G YVPP +R 
Sbjct:   151 GDHWTTRCPYKDTLGPMQKELAEQLGLSTGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRD 210

Query:   197 GAERTGTDMR--RRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISR 253
             G  R G  M+  RR D+N+ +RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+
Sbjct:   211 GGSRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSK 270

Query:   254 GFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN 293
             GF F++F  +EDA RAI  ++G+GYD+LIL VEWA P TN
Sbjct:   271 GFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSTN 310


>UNIPROTKB|Q6DJI8 [details] [associations]
            symbol:eif3g-a "Eukaryotic translation initiation factor 3
            subunit G-A" species:8355 "Xenopus laevis" [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=ISS] [GO:0006413
            "translational initiation" evidence=ISS] [GO:0003743 "translation
            initiation factor activity" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 InterPro:IPR017334 Pfam:PF00076
            PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            GO:GO:0006413 Gene3D:3.30.70.330 GO:GO:0003743 GO:GO:0005852
            HSSP:O75821 KO:K03248 HAMAP:MF_03006 InterPro:IPR024675
            PANTHER:PTHR10352 Pfam:PF12353 EMBL:BC075190 RefSeq:NP_001086477.1
            UniGene:Xl.48772 ProteinModelPortal:Q6DJI8 SMR:Q6DJI8 GeneID:446311
            KEGG:xla:446311 CTD:446311 Xenbase:XB-GENE-6251503
            HOVERGEN:HBG026850 Uniprot:Q6DJI8
        Length = 308

 Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
 Identities = 116/279 (41%), Positives = 161/279 (57%)

Query:    32 PKQVIGPDENG-VKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDA 90
             P++VI    NG +K + EYK NDD   VKI    R  K+   + SK   +R+NW KFG++
Sbjct:    43 PREVI----NGNIKTITEYKLNDDDKTVKIV---RTFKIETVKASKVVAQRKNWKKFGNS 95

Query:    91 VREDVGSRL-TMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKG 149
               +  G  + T   ++++L+        +    +   D + +L KG  ++  CR C  KG
Sbjct:    96 EYDPPGPNVATTTVSDDVLMTF--ITNKEDLNNQEEEDPMNKL-KGQKIVS-CRIC--KG 149

Query:   150 DHWTSRCPFKDLAAPAETFI---------DK---PXXXXXXXXXXXXTKGTYVPPGMRAG 197
             DHWT+RCP+KD   P +  +         DK   P              G YVPP +R G
Sbjct:   150 DHWTTRCPYKDTLGPMQKELAEQLGLSTGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRDG 209

Query:   198 AERTGTDMR--RRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRG 254
               R G  M+  RR D+N+ +RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+G
Sbjct:   210 GSRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKG 269

Query:   255 FGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN 293
             F F++F  +EDA RAI  ++G+GYD+LIL VEWA P TN
Sbjct:   270 FAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSTN 308


>UNIPROTKB|F2Z4J5 [details] [associations]
            symbol:EIF3G "Eukaryotic translation initiation factor 3
            subunit G" species:9913 "Bos taurus" [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 InterPro:IPR017334 Pfam:PF00076
            PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003743 GO:GO:0005852
            GeneTree:ENSGT00510000047802 InterPro:IPR024675 PANTHER:PTHR10352
            Pfam:PF12353 IPI:IPI00700187 UniGene:Bt.49351 OMA:NSEFDAP
            EMBL:DAAA02019449 ProteinModelPortal:F2Z4J5 SMR:F2Z4J5 PRIDE:F2Z4J5
            Ensembl:ENSBTAT00000003545 Uniprot:F2Z4J5
        Length = 320

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 114/278 (41%), Positives = 157/278 (56%)

Query:    31 PPKQVIGPDENG-VKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGD 89
             PPK+VI    NG +K V EYK ++DG K KI    R+      + SK    R+NW KFG+
Sbjct:    55 PPKEVI----NGNIKTVTEYKIDEDGKKFKIVRTFRIE---TRKASKAVARRKNWKKFGN 107

Query:    90 AVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKG 149
             +  +  G  +   +  + +         +    +   D + +L KG  ++  CR C  KG
Sbjct:   108 SEFDPPGPNVATTTVSDDV-SMTFITSKEDLNCQEEEDPMNKL-KGQKIVS-CRIC--KG 162

Query:   150 DHWTSRCPFKDLAAPAETFI-----------DKPXXXXXXXXXXXXTKGTYVPPGMRAGA 198
             DHWT+RCP+KD   P +  +           +K               G YVPP +R GA
Sbjct:   163 DHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGA 222

Query:   199 ERTGTDMR--RRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGF 255
              R G  M+  RR D+N+ +RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF
Sbjct:   223 SRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGF 282

Query:   256 GFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN 293
              F++F  +EDA RAI  ++G+GYD+LIL VEWA P TN
Sbjct:   283 AFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSTN 320


>UNIPROTKB|E2RGG6 [details] [associations]
            symbol:EIF3G "Eukaryotic translation initiation factor 3
            subunit G" species:9615 "Canis lupus familiaris" [GO:0005852
            "eukaryotic translation initiation factor 3 complex" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 InterPro:IPR017334 Pfam:PF00076
            PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003743 GO:GO:0005852
            GeneTree:ENSGT00510000047802 KO:K03248 InterPro:IPR024675
            PANTHER:PTHR10352 Pfam:PF12353 CTD:8666 OMA:NSEFDAP
            EMBL:AAEX03012427 RefSeq:XP_854113.1 ProteinModelPortal:E2RGG6
            Ensembl:ENSCAFT00000028426 GeneID:612971 KEGG:cfa:612971
            NextBio:20898427 Uniprot:E2RGG6
        Length = 320

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 114/278 (41%), Positives = 157/278 (56%)

Query:    31 PPKQVIGPDENG-VKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGD 89
             PPK+VI    NG +K V EYK ++DG K KI    R+      + SK    R+NW KFG+
Sbjct:    55 PPKEVI----NGNIKTVTEYKIDEDGKKFKIVRTFRIE---TRKASKAVARRKNWKKFGN 107

Query:    90 AVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKG 149
             +  +  G  +   +  + +         +    +   D + +L KG  ++  CR C  KG
Sbjct:   108 SEFDPPGPNVATTTVSDDV-SMTFITSKEDLNCQEEEDPMNKL-KGQKIVS-CRIC--KG 162

Query:   150 DHWTSRCPFKDLAAPAETFI-----------DKPXXXXXXXXXXXXTKGTYVPPGMRAGA 198
             DHWT+RCP+KD   P +  +           +K               G YVPP +R GA
Sbjct:   163 DHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQAAQNKTGKYVPPSLRDGA 222

Query:   199 ERTGTDMR--RRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGF 255
              R G  M+  RR D+N+ +RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF
Sbjct:   223 SRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGF 282

Query:   256 GFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN 293
              F++F  +EDA RAI  ++G+GYD+LIL VEWA P TN
Sbjct:   283 AFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSTN 320


>UNIPROTKB|O75821 [details] [associations]
            symbol:EIF3G "Eukaryotic translation initiation factor 3
            subunit G" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            [GO:0006413 "translational initiation" evidence=IC;IDA;TAS]
            [GO:0003743 "translation initiation factor activity"
            evidence=IC;IDA] [GO:0005852 "eukaryotic translation initiation
            factor 3 complex" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005829 "cytosol" evidence=TAS] [GO:0006412
            "translation" evidence=TAS] [GO:0010467 "gene expression"
            evidence=TAS] [GO:0044267 "cellular protein metabolic process"
            evidence=TAS] Reactome:REACT_71 Reactome:REACT_17015
            InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR017334
            Pfam:PF00076 PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0000166
            GO:GO:0006413 Gene3D:3.30.70.330 GO:GO:0003743 eggNOG:COG0724
            GO:GO:0005852 KO:K03248 HAMAP:MF_03006 InterPro:IPR024675
            PANTHER:PTHR10352 Pfam:PF12353 HOVERGEN:HBG026850
            Reactome:REACT_1762 CTD:8666 HOGENOM:HOG000239560 OrthoDB:EOG4Z0B62
            OMA:NSEFDAP EMBL:U96074 EMBL:AF020833 EMBL:AF092453 EMBL:AF094850
            EMBL:BT006889 EMBL:BC000733 EMBL:BC008469 IPI:IPI00290460
            RefSeq:NP_003746.2 UniGene:Hs.529059 PDB:2CQ0 PDBsum:2CQ0
            ProteinModelPortal:O75821 SMR:O75821 DIP:DIP-31115N IntAct:O75821
            MINT:MINT-3001737 STRING:O75821 PhosphoSite:O75821 PaxDb:O75821
            PeptideAtlas:O75821 PRIDE:O75821 DNASU:8666 Ensembl:ENST00000253108
            GeneID:8666 KEGG:hsa:8666 UCSC:uc002mnd.3 GeneCards:GC19M010225
            HGNC:HGNC:3274 HPA:HPA041997 MIM:603913 neXtProt:NX_O75821
            PharmGKB:PA162384827 InParanoid:O75821 PhylomeDB:O75821
            ChiTaRS:EIF3G EvolutionaryTrace:O75821 GenomeRNAi:8666
            NextBio:32507 Bgee:O75821 CleanEx:HS_EIF3G Genevestigator:O75821
            GermOnline:ENSG00000130811 Uniprot:O75821
        Length = 320

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 114/278 (41%), Positives = 157/278 (56%)

Query:    31 PPKQVIGPDENG-VKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGD 89
             PPK+VI    NG +K V EYK ++DG K KI    R+      + SK    R+NW KFG+
Sbjct:    55 PPKEVI----NGNIKTVTEYKIDEDGKKFKIVRTFRIE---TRKASKAVARRKNWKKFGN 107

Query:    90 AVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKG 149
             +  +  G  +   +  + +         +    +   D + +L KG  ++  CR C  KG
Sbjct:   108 SEFDPPGPNVATTTVSDDV-SMTFITSKEDLNCQEEEDPMNKL-KGQKIVS-CRIC--KG 162

Query:   150 DHWTSRCPFKDLAAPAETFI-----------DKPXXXXXXXXXXXXTKGTYVPPGMRAGA 198
             DHWT+RCP+KD   P +  +           +K               G YVPP +R GA
Sbjct:   163 DHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGA 222

Query:   199 ERTGTDMR--RRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGF 255
              R G  M+  RR D+N+ +RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF
Sbjct:   223 SRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGF 282

Query:   256 GFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN 293
              F++F  +EDA RAI  ++G+GYD+LIL VEWA P TN
Sbjct:   283 AFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSTN 320


>UNIPROTKB|F1S3I3 [details] [associations]
            symbol:EIF3G "Eukaryotic translation initiation factor 3
            subunit G" species:9823 "Sus scrofa" [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 InterPro:IPR017334 Pfam:PF00076
            PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003743 GO:GO:0005852
            GeneTree:ENSGT00510000047802 InterPro:IPR024675 PANTHER:PTHR10352
            Pfam:PF12353 OMA:NSEFDAP EMBL:CU462940 Ensembl:ENSSSCT00000014925
            Uniprot:F1S3I3
        Length = 322

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 114/278 (41%), Positives = 157/278 (56%)

Query:    31 PPKQVIGPDENG-VKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGD 89
             PPK+VI    NG +K V EYK ++DG K KI    R+      + SK    R+NW KFG+
Sbjct:    57 PPKEVI----NGNIKTVTEYKIDEDGKKFKIVRTFRIE---TRKASKAVARRKNWKKFGN 109

Query:    90 AVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKG 149
             +  +  G  +   +  + +         +    +   D + +L KG  ++  CR C  KG
Sbjct:   110 SEFDPPGPNVATTTVSDDV-SMTFITSKEDLNCQEEEDPMNKL-KGQKIVS-CRIC--KG 164

Query:   150 DHWTSRCPFKDLAAPAETFI-----------DKPXXXXXXXXXXXXTKGTYVPPGMRAGA 198
             DHWT+RCP+KD   P +  +           +K               G YVPP +R GA
Sbjct:   165 DHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGA 224

Query:   199 ERTGTDMR--RRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGF 255
              R G  M+  RR D+N+ +RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF
Sbjct:   225 SRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGF 284

Query:   256 GFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN 293
              F++F  +EDA RAI  ++G+GYD+LIL VEWA P TN
Sbjct:   285 AFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSTN 322


>MGI|MGI:1858258 [details] [associations]
            symbol:Eif3g "eukaryotic translation initiation factor 3,
            subunit G" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=ISO;IDA]
            [GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
            initiation" evidence=ISO;IDA] InterPro:IPR000504 InterPro:IPR012677
            InterPro:IPR017334 Pfam:PF00076 PIRSF:PIRSF037949 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:1858258 GO:GO:0005634 GO:GO:0048471
            GO:GO:0000166 GO:GO:0006413 Gene3D:3.30.70.330 GO:GO:0003743
            eggNOG:COG0724 GO:GO:0005852 GeneTree:ENSGT00510000047802 KO:K03248
            HAMAP:MF_03006 InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353
            HOVERGEN:HBG026850 CTD:8666 HOGENOM:HOG000239560 OrthoDB:EOG4Z0B62
            OMA:NSEFDAP ChiTaRS:EIF3G EMBL:U70733 EMBL:AF108214 EMBL:BC008511
            IPI:IPI00622371 RefSeq:NP_058572.2 UniGene:Mm.427309
            ProteinModelPortal:Q9Z1D1 SMR:Q9Z1D1 IntAct:Q9Z1D1
            MINT:MINT-1572167 STRING:Q9Z1D1 PhosphoSite:Q9Z1D1
            REPRODUCTION-2DPAGE:Q9Z1D1 PaxDb:Q9Z1D1 PRIDE:Q9Z1D1
            Ensembl:ENSMUST00000004206 GeneID:53356 KEGG:mmu:53356
            InParanoid:Q9Z1D1 NextBio:310169 Bgee:Q9Z1D1 Genevestigator:Q9Z1D1
            GermOnline:ENSMUSG00000070319 Uniprot:Q9Z1D1
        Length = 320

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 114/278 (41%), Positives = 156/278 (56%)

Query:    31 PPKQVIGPDENG-VKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGD 89
             PPK+VI    NG +K V EYK  +DG K KI    R+      + SK    R+NW KFG+
Sbjct:    55 PPKEVI----NGNIKTVTEYKIEEDGKKFKIVRTFRIE---TRKASKAVARRKNWKKFGN 107

Query:    90 AVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKG 149
             +  +  G  +   +  + +         +    +   D + +L KG  ++  CR C  KG
Sbjct:   108 SEFDPPGPNVATTTVSDDV-SMTFITSKEDLNCQEEEDPMNKL-KGQKIVS-CRIC--KG 162

Query:   150 DHWTSRCPFKDLAAPAETFI-----------DKPXXXXXXXXXXXXTKGTYVPPGMRAGA 198
             DHWT+RCP+KD   P +  +           +K               G YVPP +R GA
Sbjct:   163 DHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQAAQSKTGKYVPPSLRDGA 222

Query:   199 ERTGTDMR--RRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGF 255
              R G  M+  RR D+N+ +RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF
Sbjct:   223 SRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGF 282

Query:   256 GFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN 293
              F++F  +EDA RAI  ++G+GYD+LIL VEWA P TN
Sbjct:   283 AFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSTN 320


>UNIPROTKB|Q641B2 [details] [associations]
            symbol:eif3g-b "Eukaryotic translation initiation factor 3
            subunit G-B" species:8355 "Xenopus laevis" [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=ISS] [GO:0006413
            "translational initiation" evidence=ISS] [GO:0003743 "translation
            initiation factor activity" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 InterPro:IPR017334 Pfam:PF00076
            PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            GO:GO:0006413 Gene3D:3.30.70.330 GO:GO:0003743 GO:GO:0005852
            HSSP:O75821 KO:K03248 HAMAP:MF_03006 InterPro:IPR024675
            PANTHER:PTHR10352 Pfam:PF12353 HOVERGEN:HBG026850 EMBL:BC082427
            RefSeq:NP_001087888.1 UniGene:Xl.3547 ProteinModelPortal:Q641B2
            SMR:Q641B2 PRIDE:Q641B2 GeneID:447749 KEGG:xla:447749
            Xenbase:XB-GENE-6070476 Uniprot:Q641B2
        Length = 308

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 117/279 (41%), Positives = 160/279 (57%)

Query:    32 PKQVIGPDENG-VKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDA 90
             P++VI    NG +K + EYK ND   K+KI    R  K+   + SK    R+NW KFG++
Sbjct:    43 PREVI----NGNIKTITEYKLNDKDKKIKIV---RTFKIETLKASKVVAHRKNWKKFGNS 95

Query:    91 VREDVGSRL-TMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKG 149
               +  G  + T   ++++L+        +    +   D + +L KG  ++  CR C  KG
Sbjct:    96 EYDPPGPNVATTTVSDDVLMTF--ITNKEDLNNQEEEDPMNKL-KGQKIVS-CRIC--KG 149

Query:   150 DHWTSRCPFKDLAAP-----AETF----IDK---PXXXXXXXXXXXXTKGTYVPPGMRAG 197
             DHWT+RCP+KD   P     AE       DK   P              G YVPP +R G
Sbjct:   150 DHWTTRCPYKDTLGPMQKELAEQLGLSTADKEKAPGAEPEPAQAPVSKTGKYVPPSLRDG 209

Query:   198 AERTGTDMR--RRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRG 254
               R G  M+  RR D+N+ +RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+G
Sbjct:   210 GSRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKG 269

Query:   255 FGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN 293
             F F++F  +EDA RAI  ++G+GYD+LIL VEWA P TN
Sbjct:   270 FAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSTN 308


>RGD|1307191 [details] [associations]
            symbol:Eif3g "eukaryotic translation initiation factor 3,
            subunit G" species:10116 "Rattus norvegicus" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA;ISO;ISS] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005852 "eukaryotic translation
            initiation factor 3 complex" evidence=IEA;ISO;ISS] [GO:0006413
            "translational initiation" evidence=ISO;ISS] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 InterPro:IPR017334 Pfam:PF00076
            PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00360 RGD:1307191
            GO:GO:0005634 GO:GO:0048471 GO:GO:0000166 GO:GO:0006413
            Gene3D:3.30.70.330 GO:GO:0003743 eggNOG:COG0724 EMBL:CH473993
            GO:GO:0005852 HSSP:O75821 KO:K03248 HAMAP:MF_03006
            InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353
            HOVERGEN:HBG026850 CTD:8666 HOGENOM:HOG000239560 OrthoDB:EOG4Z0B62
            EMBL:BC086383 IPI:IPI00365487 RefSeq:NP_001013113.1
            UniGene:Rn.107880 ProteinModelPortal:Q5RK09 SMR:Q5RK09
            STRING:Q5RK09 PhosphoSite:Q5RK09 PRIDE:Q5RK09 GeneID:298700
            KEGG:rno:298700 UCSC:RGD:1307191 InParanoid:Q5RK09 NextBio:644231
            ArrayExpress:Q5RK09 Genevestigator:Q5RK09 Uniprot:Q5RK09
        Length = 320

 Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
 Identities = 114/278 (41%), Positives = 156/278 (56%)

Query:    31 PPKQVIGPDENG-VKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGD 89
             PPK+VI    NG +K V EYK  +DG K KI    R+      + SK    R+NW KFG+
Sbjct:    55 PPKEVI----NGNIKTVTEYKVEEDGKKFKIVRTFRIE---TRKASKAVARRKNWKKFGN 107

Query:    90 AVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKG 149
             +  +  G  +   +  + +         +    +   D + +L KG  ++  CR C  KG
Sbjct:   108 SEFDPPGPNVATTTVSDDV-SMTFITSKEDLNCQEEEDPMNKL-KGQKIVS-CRIC--KG 162

Query:   150 DHWTSRCPFKDLAAPAETFI-----------DKPXXXXXXXXXXXXTKGTYVPPGMRAGA 198
             DHWT+RCP+KD   P +  +           +K               G YVPP +R GA
Sbjct:   163 DHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQAAQNKTGKYVPPSLRDGA 222

Query:   199 ERTGTDMR--RRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGF 255
              R G  M+  RR D+N+ +RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF
Sbjct:   223 SRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGF 282

Query:   256 GFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN 293
              F++F  +EDA RAI  ++G+GYD+LIL VEWA P TN
Sbjct:   283 AFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSTN 320


>UNIPROTKB|Q5RK09 [details] [associations]
            symbol:Eif3g "Eukaryotic translation initiation factor 3
            subunit G" species:10116 "Rattus norvegicus" [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 InterPro:IPR017334 Pfam:PF00076
            PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00360 RGD:1307191
            GO:GO:0005634 GO:GO:0048471 GO:GO:0000166 GO:GO:0006413
            Gene3D:3.30.70.330 GO:GO:0003743 eggNOG:COG0724 EMBL:CH473993
            GO:GO:0005852 HSSP:O75821 KO:K03248 HAMAP:MF_03006
            InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353
            HOVERGEN:HBG026850 CTD:8666 HOGENOM:HOG000239560 OrthoDB:EOG4Z0B62
            EMBL:BC086383 IPI:IPI00365487 RefSeq:NP_001013113.1
            UniGene:Rn.107880 ProteinModelPortal:Q5RK09 SMR:Q5RK09
            STRING:Q5RK09 PhosphoSite:Q5RK09 PRIDE:Q5RK09 GeneID:298700
            KEGG:rno:298700 UCSC:RGD:1307191 InParanoid:Q5RK09 NextBio:644231
            ArrayExpress:Q5RK09 Genevestigator:Q5RK09 Uniprot:Q5RK09
        Length = 320

 Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
 Identities = 114/278 (41%), Positives = 156/278 (56%)

Query:    31 PPKQVIGPDENG-VKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGD 89
             PPK+VI    NG +K V EYK  +DG K KI    R+      + SK    R+NW KFG+
Sbjct:    55 PPKEVI----NGNIKTVTEYKVEEDGKKFKIVRTFRIE---TRKASKAVARRKNWKKFGN 107

Query:    90 AVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKG 149
             +  +  G  +   +  + +         +    +   D + +L KG  ++  CR C  KG
Sbjct:   108 SEFDPPGPNVATTTVSDDV-SMTFITSKEDLNCQEEEDPMNKL-KGQKIVS-CRIC--KG 162

Query:   150 DHWTSRCPFKDLAAPAETFI-----------DKPXXXXXXXXXXXXTKGTYVPPGMRAGA 198
             DHWT+RCP+KD   P +  +           +K               G YVPP +R GA
Sbjct:   163 DHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQAAQNKTGKYVPPSLRDGA 222

Query:   199 ERTGTDMR--RRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGF 255
              R G  M+  RR D+N+ +RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF
Sbjct:   223 SRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGF 282

Query:   256 GFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN 293
              F++F  +EDA RAI  ++G+GYD+LIL VEWA P TN
Sbjct:   283 AFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSTN 320


>UNIPROTKB|Q3ZC12 [details] [associations]
            symbol:EIF3G "Eukaryotic translation initiation factor 3
            subunit G" species:9913 "Bos taurus" [GO:0006413 "translational
            initiation" evidence=ISS] [GO:0003743 "translation initiation
            factor activity" evidence=ISS] [GO:0005852 "eukaryotic translation
            initiation factor 3 complex" evidence=ISS] [GO:0048471 "perinuclear
            region of cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR017334
            Pfam:PF00076 PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0048471 GO:GO:0000166 GO:GO:0006413
            Gene3D:3.30.70.330 GO:GO:0003743 eggNOG:COG0724 GO:GO:0005852
            KO:K03248 HAMAP:MF_03006 InterPro:IPR024675 PANTHER:PTHR10352
            Pfam:PF12353 HOVERGEN:HBG026850 EMBL:BC102984 IPI:IPI00700187
            RefSeq:NP_001073091.1 UniGene:Bt.49351 ProteinModelPortal:Q3ZC12
            SMR:Q3ZC12 STRING:Q3ZC12 PRIDE:Q3ZC12 GeneID:615695 KEGG:bta:615695
            CTD:8666 HOGENOM:HOG000239560 InParanoid:Q3ZC12 OrthoDB:EOG4Z0B62
            NextBio:20899745 Uniprot:Q3ZC12
        Length = 320

 Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
 Identities = 113/278 (40%), Positives = 157/278 (56%)

Query:    31 PPKQVIGPDENG-VKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGD 89
             PPK+VI    NG +K V EY+ ++DG K KI    R+      + SK    R+NW KFG+
Sbjct:    55 PPKEVI----NGNIKTVTEYRIDEDGKKFKIVRTFRIE---TRKASKAVARRKNWKKFGN 107

Query:    90 AVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKG 149
             +  +  G  +   +  + +         +    +   D + +L KG  ++  CR C  KG
Sbjct:   108 SEFDPPGPNVATTTVSDDV-SMTFITSKEDLNCQEEEDPMNKL-KGQKIVS-CRIC--KG 162

Query:   150 DHWTSRCPFKDLAAPAETFI-----------DKPXXXXXXXXXXXXTKGTYVPPGMRAGA 198
             DHWT+RCP+KD   P +  +           +K               G YVPP +R GA
Sbjct:   163 DHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGA 222

Query:   199 ERTGTDMR--RRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGF 255
              R G  M+  RR D+N+ +RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF
Sbjct:   223 SRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGF 282

Query:   256 GFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN 293
              F++F  +EDA RAI  ++G+GYD+LIL VEWA P TN
Sbjct:   283 AFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSTN 320


>ZFIN|ZDB-GENE-040426-1076 [details] [associations]
            symbol:eif3g "eukaryotic translation initiation
            factor 3, subunit G" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0006413 "translational initiation"
            evidence=IEA;ISS] [GO:0005852 "eukaryotic translation initiation
            factor 3 complex" evidence=ISS] [GO:0003743 "translation initiation
            factor activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            InterPro:IPR017334 Pfam:PF00076 PIRSF:PIRSF037949 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-040426-1076 GO:GO:0000166 GO:GO:0006413
            Gene3D:3.30.70.330 GO:GO:0003743 eggNOG:COG0724 GO:GO:0005852
            HSSP:O75821 GeneTree:ENSGT00510000047802 KO:K03248 HAMAP:MF_03006
            InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353
            HOVERGEN:HBG026850 CTD:8666 HOGENOM:HOG000239560 OrthoDB:EOG4Z0B62
            EMBL:AY648835 EMBL:BC049046 EMBL:BC153489 IPI:IPI00500209
            RefSeq:NP_957293.1 UniGene:Dr.161 ProteinModelPortal:Q6DRC4
            SMR:Q6DRC4 STRING:Q6DRC4 PRIDE:Q6DRC4 Ensembl:ENSDART00000018071
            Ensembl:ENSDART00000127487 GeneID:393974 KEGG:dre:393974
            InParanoid:Q7ZUH3 OMA:NSEFDAP NextBio:20814945 Bgee:Q6DRC4
            Uniprot:Q6DRC4
        Length = 293

 Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
 Identities = 112/277 (40%), Positives = 156/277 (56%)

Query:    32 PKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAV 91
             PK+ +   +  +K V EYK +DDG K KI    R  K+   + SK    R+NW KFG++ 
Sbjct:    29 PKETV---KGNIKTVTEYKIDDDGQKFKII---RTFKIETRKASKAVARRKNWKKFGNSE 82

Query:    92 REDVGSRL-TMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGK-GGAVLMVCRTCGKKG 149
              +  G  + T   ++++ +       S  E+  A       + K  G  ++ CR C  KG
Sbjct:    83 YDAPGPNVATTTVSDDVFMTFI----SSKEDLNAQDQDEDPMNKLKGQKIVSCRIC--KG 136

Query:   150 DHWTSRCPFKDLAAPAETFI---------DKPXXXXXXXXXXXXTK-GTYVPPGMRAGAE 199
             DHWT+RCP+KD   P +  +         +K              K G YVPP +R G  
Sbjct:   137 DHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKAAEPEPAQPVQNKTGKYVPPSLRDGGT 196

Query:   200 RTGTDMR--RRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFG 256
             R G  M+  RR D+N+ +RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF 
Sbjct:   197 RRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKNTGQSKGFA 256

Query:   257 FVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN 293
             F++F  +EDA RAI  ++G+GYD+LIL VEWA P  N
Sbjct:   257 FISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSNN 293


>UNIPROTKB|K7ENA8 [details] [associations]
            symbol:EIF3G "Eukaryotic translation initiation factor 3
            subunit G" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR017334
            Pfam:PF00076 PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00360
            Gene3D:3.30.70.330 EMBL:AC020931 InterPro:IPR024675
            PANTHER:PTHR10352 Pfam:PF12353 HGNC:HGNC:3274
            Ensembl:ENST00000589454 Uniprot:K7ENA8
        Length = 289

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 100/247 (40%), Positives = 140/247 (56%)

Query:    31 PPKQVIGPDENG-VKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGD 89
             PPK+VI    NG +K V EYK ++DG K KI    R+      + SK    R+NW KFG+
Sbjct:    55 PPKEVI----NGNIKTVTEYKIDEDGKKFKIVRTFRIE---TRKASKAVARRKNWKKFGN 107

Query:    90 AVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKG 149
             +  +  G  +   +  + +         +    +   D + +L KG  ++  CR C  KG
Sbjct:   108 SEFDPPGPNVATTTVSDDV-SMTFITSKEDLNCQEEEDPMNKL-KGQKIVS-CRIC--KG 162

Query:   150 DHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK---GTYVPPGMRAGAERTGTDMR 206
             DHWT+RCP+KD   P +  + +             T+   G YVPP +R GA R G  M+
Sbjct:   163 DHWTTRCPYKDTLGPMQKELAEQLGLSTELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 222

Query:   207 --RRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNK 263
               RR D+N+ +RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  +
Sbjct:   223 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRR 282

Query:   264 EDAQRAI 270
             EDA RAI
Sbjct:   283 EDAARAI 289


>POMBASE|SPBC18H10.03 [details] [associations]
            symbol:tif35 "translation initiation factor eIF3g"
            species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
            translational initiation" evidence=NAS] [GO:0003723 "RNA binding"
            evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
            "cytosol" evidence=IDA] [GO:0006413 "translational initiation"
            evidence=ISS] [GO:0016282 "eukaryotic 43S preinitiation complex"
            evidence=IDA] [GO:0071540 "eukaryotic translation initiation factor
            3 complex, eIF3e" evidence=IDA] [GO:0071541 "eukaryotic translation
            initiation factor 3 complex, eIF3m" evidence=IDA] [GO:0003743
            "translation initiation factor activity" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR017334
            Pfam:PF00076 PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00360
            PomBase:SPBC18H10.03 GO:GO:0005829 GO:GO:0005634 GO:GO:0000166
            EMBL:CU329671 Gene3D:3.30.70.330 GenomeReviews:CU329671_GR
            GO:GO:0003723 GO:GO:0003743 eggNOG:COG0724 GO:GO:0002183 KO:K03248
            HAMAP:MF_03006 InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353
            GO:GO:0016282 GO:GO:0071540 GO:GO:0071541 HOGENOM:HOG000239560
            OMA:NSEFDAP OrthoDB:EOG4QJVX7 EMBL:AB011823 EMBL:D89144 PIR:T39767
            RefSeq:NP_595727.1 ProteinModelPortal:P78795 STRING:P78795
            EnsemblFungi:SPBC18H10.03.1 GeneID:2540819 KEGG:spo:SPBC18H10.03
            NextBio:20801936 Uniprot:P78795
        Length = 282

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 98/261 (37%), Positives = 155/261 (59%)

Query:    38 PDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG- 96
             PD  G K +IE++ +D+G KVK+    R + +   R+     ER+ W KFG    ++ G 
Sbjct:    28 PD--GTKTMIEFRIDDNGKKVKVTRVIR-KTVITERVQHAVAERKKWKKFGKEAGKNSGV 84

Query:    97 -SRLTMVSTEEILLERPRA-PGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTS 154
              +R T V  E + L        +K EE   A  + A++   G+ ++ CR C  KG+H+T+
Sbjct:    85 DARTTSVG-ENVQLRLQLGWTTTKEEEQDEAALAAAKVKAKGSSVVRCRAC--KGNHFTA 141

Query:   155 RCPFKDLAAPA-ETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAER-TGTDM--RRRND 210
             +CP+K +  P  E  +D               KG Y+ P +RAG+ R +G  M  R R+D
Sbjct:   142 QCPYKSIIGPVDEPPLDA-SPVSSRASGALGEKGRYIAPHLRAGSGRESGDSMFKRERDD 200

Query:   211 ENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAI 270
               ++RVTNLS+DTRE +L +LFR FG + RVY+A D++TG ++GF FV++ +++ A +A 
Sbjct:   201 SATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKAR 260

Query:   271 NKLNGYGYDNLILRVEWATPR 291
             ++L+GYG++NLILR E++ PR
Sbjct:   261 DRLDGYGWNNLILRCEFSKPR 281


>FB|FBgn0029629 [details] [associations]
            symbol:CG8636 species:7227 "Drosophila melanogaster"
            [GO:0006413 "translational initiation" evidence=ISS] [GO:0005852
            "eukaryotic translation initiation factor 3 complex" evidence=ISS]
            [GO:0003743 "translation initiation factor activity" evidence=ISS]
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0007052 "mitotic spindle organization" evidence=IMP]
            [GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0007067
            "mitosis" evidence=IMP] InterPro:IPR000504 InterPro:IPR001878
            InterPro:IPR012677 InterPro:IPR017334 Pfam:PF00076
            PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00343 SMART:SM00360
            GO:GO:0007067 GO:GO:0000166 EMBL:AE014298 GO:GO:0008270
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0003743 GO:GO:0000022
            eggNOG:COG0724 GO:GO:0005852 EMBL:AY118933 RefSeq:NP_570011.1
            UniGene:Dm.8117 HSSP:O75821 ProteinModelPortal:Q9W4X7 SMR:Q9W4X7
            MINT:MINT-933929 STRING:Q9W4X7 PaxDb:Q9W4X7 PRIDE:Q9W4X7
            EnsemblMetazoa:FBtr0070446 GeneID:31243 KEGG:dme:Dmel_CG8636
            UCSC:CG8636-RA FlyBase:FBgn0029629 GeneTree:ENSGT00510000047802
            InParanoid:Q9W4X7 KO:K03248 OMA:SNLSEAM OrthoDB:EOG4W6MBP
            PhylomeDB:Q9W4X7 GenomeRNAi:31243 NextBio:772609 Bgee:Q9W4X7
            HAMAP:MF_03006 InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353
            Uniprot:Q9W4X7
        Length = 269

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 97/256 (37%), Positives = 141/256 (55%)

Query:    40 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--S 97
             ENG K V EYK+N D  K K+    R  K++   + K   +RR W KFGD+  +  G  S
Sbjct:    30 ENGQKYVTEYKYNKDDKKTKVV---RTYKISKQVVPKTVAKRRTWTKFGDSKNDKPGPNS 86

Query:    98 RLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCP 157
             + TMVS EEI+++      SK +E   A D L    K    +  CR C   G+HW+  CP
Sbjct:    87 QTTMVS-EEIIMQ---FLNSKEDEK--ANDPLLDPTKN---IAKCRICN--GEHWSVNCP 135

Query:   158 FKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVT 217
             +K  A      ++K               G YVPP ++  +++    MR R+D  ++R++
Sbjct:   136 YKGTAMDTN-MMEKKASAAAAAAVDAPKSGKYVPPFLK-DSQKGALGMRGRDDTAAIRIS 193

Query:   218 NLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYG 277
             NLSE   E DL EL +  G  S++Y+A D+ TG+ +GF +V+F  ++DA  AI  LNG+G
Sbjct:   194 NLSESMTEADLEELVKKIGPQSKMYLARDKNTGLCKGFAYVHFKQRKDAAAAIEILNGHG 253

Query:   278 YDNLILRVEWATPRTN 293
             YD+LIL VEW+ P+ N
Sbjct:   254 YDHLILSVEWSKPQNN 269


>UNIPROTKB|A4RHN3 [details] [associations]
            symbol:TIF35 "Eukaryotic translation initiation factor 3
            subunit G" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677
            InterPro:IPR017334 Pfam:PF00076 PIRSF:PIRSF037949 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003743 EMBL:CM001232 eggNOG:COG0724 KO:K03248 HAMAP:MF_03006
            InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353
            RefSeq:XP_003715298.1 ProteinModelPortal:A4RHN3 STRING:A4RHN3
            GeneID:2682994 KEGG:mgr:MGG_07109 OrthoDB:EOG4QJVX7 Uniprot:A4RHN3
        Length = 303

 Score = 242 (90.2 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
 Identities = 50/115 (43%), Positives = 78/115 (67%)

Query:   186 KGTYVPPGMRAGAERTGTDMR--------RRNDENSVRVTNLSEDTREPDLLELFRPFGA 237
             KG+YVPP +R G  + G  M          R+D  ++RVTN+SE   E +L ++F  FG 
Sbjct:   190 KGSYVPPALR-GDRKEGEKMGGGAGGKYGERDDLATLRVTNVSEMAEEQELRDMFERFGR 248

Query:   238 VSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRT 292
             V+RV++A D+ TG+++GF F++F ++EDA +A NK++G+G+ +LILRVE+A   T
Sbjct:   249 VTRVFLAKDRDTGLAKGFAFISFADREDAVKACNKMDGWGFKHLILRVEFAKKAT 303

 Score = 186 (70.5 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
 Identities = 62/211 (29%), Positives = 91/211 (43%)

Query:    10 QPKLRWSXXXXXXXXXXXXXXPPKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKL 69
             +P   W+               P+ ++  D  G K +I ++FND G KVK     RVR  
Sbjct:     6 KPVQAWADDDDIDDGTTERLPDPQTIVNKD--GTKTIISWRFNDQGQKVK--TTRRVRLT 61

Query:    70 ANARL-SKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPE--ETKAAG 126
              +  + + R  ER+ W KFG + ++  G      S  E ++ RP A   K +  E+K A 
Sbjct:    62 THREVVNPRVAERKKWEKFGLSAKDGPGPASDTTSVGENIIFRPSANWRKDQKDESKDAN 121

Query:   127 DSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDL------AAPAETF----IDKPXXXX 176
              + A   K     + CR C   G+H+T+RCP+KD       AAPA        D+     
Sbjct:   122 AN-AMKDKLKDKKVKCRICN--GEHFTARCPYKDTMAPIGEAAPAGGVGGGGDDEGGILS 178

Query:   177 X--XXXXXXXTKGTYVPPGMRAGAERTGTDM 205
                        KG+YVPP +R G  + G  M
Sbjct:   179 APGAAGGAGAKKGSYVPPALR-GDRKEGEKM 208


>FB|FBgn0038796 [details] [associations]
            symbol:CG10881 species:7227 "Drosophila melanogaster"
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0003743 "translation
            initiation factor activity" evidence=ISS] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=ISS] [GO:0006413
            "translational initiation" evidence=ISS] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR001878 InterPro:IPR012677 InterPro:IPR017334
            Pfam:PF00076 PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00343
            SMART:SM00360 EMBL:AE014297 GO:GO:0000166 GO:GO:0008270
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0003743 eggNOG:COG0724
            GO:GO:0005852 HSSP:O75821 GeneTree:ENSGT00510000047802 KO:K03248
            HAMAP:MF_03006 InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353
            RefSeq:NP_650887.1 ProteinModelPortal:Q9VDM6 SMR:Q9VDM6
            STRING:Q9VDM6 PaxDb:Q9VDM6 PRIDE:Q9VDM6 EnsemblMetazoa:FBtr0083885
            GeneID:42422 KEGG:dme:Dmel_CG10881 UCSC:CG10881-RA
            FlyBase:FBgn0038796 InParanoid:Q9VDM6 OMA:LILCVEW OrthoDB:EOG476HG4
            PhylomeDB:Q9VDM6 GenomeRNAi:42422 NextBio:828693 Bgee:Q9VDM6
            Uniprot:Q9VDM6
        Length = 273

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 96/256 (37%), Positives = 143/256 (55%)

Query:    44 KKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTM 101
             K V EYKFNDDG KVK+    ++ K     + K    RRNW KFGD+  +  G  S+ TM
Sbjct:    32 KYVTEYKFNDDGKKVKVVRTFKIEKQI---VPKAVARRRNWVKFGDSRSDKPGPNSQTTM 88

Query:   102 VSTEEILLERPRAPGSKP-EETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKD 160
              S EEI ++     GSK  ++T        QL  G  +   CR C   G+HW+  CP+K 
Sbjct:    89 AS-EEIFMQ---FIGSKDFDQTHET-----QLDPGKNIAK-CRICN--GEHWSVNCPYKG 136

Query:   161 LAAPAETFIDKPXXXXXXXXXXXXTK-GTYVPPGMRAGAERTGTDM----RRRNDENSVR 215
              +  ++T ++              +K G YVPP M+ G   +G+      R R+D ++VR
Sbjct:   137 TSMDSKTVMETKANAAAAAAISDPSKTGKYVPPFMKDGGGISGSKNWGRGRDRDDSSAVR 196

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             ++NLSE   E DL EL +  G  +++Y+A ++ +G+ +GF +V+F  ++DA  AI  LNG
Sbjct:   197 ISNLSESMTETDLEELVKKIGPHTKMYLAREKNSGLCKGFAYVHFKFRQDAAAAIEVLNG 256

Query:   276 YGYDNLILRVEWATPR 291
             +GYD+LIL VEW+ P+
Sbjct:   257 HGYDHLILCVEWSKPQ 272


>ASPGD|ASPL0000001581 [details] [associations]
            symbol:AN10765 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016282 "eukaryotic 43S preinitiation complex"
            evidence=IEA] [GO:0071541 "eukaryotic translation initiation factor
            3 complex, eIF3m" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0071540 "eukaryotic translation initiation factor 3 complex,
            eIF3e" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR017334
            Pfam:PF00076 PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 EMBL:BN001301
            GO:GO:0003743 HSSP:O75821 OMA:SNLSEAM HAMAP:MF_03006
            InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353 EMBL:AACD01000103
            ProteinModelPortal:C8V330 STRING:Q5B0B3
            EnsemblFungi:CADANIAT00007002 Uniprot:C8V330
        Length = 289

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 97/278 (34%), Positives = 149/278 (53%)

Query:    31 PPKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDA 90
             PP+Q+   +++G K V+ Y+FND+G KVK+    +   +    ++ +  ERR WAKFG  
Sbjct:    22 PPQQIT-TNKDGTKTVVSYRFNDEGKKVKVTRRIKTT-VVREHVNPQVAERRTWAKFGLE 79

Query:    91 VREDVGSRLTMVSTEEILLERP----RAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCG 146
                  G      S  E ++ RP    +A  ++ E+      S+    K   V   CR C 
Sbjct:    80 KGHAAGPSFDTTSVGENIVFRPSVNWKAQAAEAEKNGGEKGSIKDQLKDKKVK--CRICS 137

Query:   147 KKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK---------GTYVPPGMRAG 197
               G+H+T+RCPFKD  AP    +D+P                       G+YVPP +R G
Sbjct:   138 --GEHFTARCPFKDTMAP----VDEPGAGGAEGGAAAGEDAAGGLGAGGGSYVPPHLRKG 191

Query:   198 AERTGTDMR---RRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRG 254
             A   G  M     ++D  ++RVTN+SE   E +L +LF  FG V+RV++A D++T  ++G
Sbjct:   192 AAGGGERMAGKYEKDDLATLRVTNVSELAEEQELRDLFERFGRVTRVFLARDRETQRAKG 251

Query:   255 FGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRT 292
             F F++F ++ DA RA +K++G+GY +LILRVE+A   T
Sbjct:   252 FAFISFADRSDAARACDKMDGFGYRHLILRVEFAKRAT 289


>CGD|CAL0003839 [details] [associations]
            symbol:TIF35 species:5476 "Candida albicans" [GO:0016282
            "eukaryotic 43S preinitiation complex" evidence=IEA] [GO:0071541
            "eukaryotic translation initiation factor 3 complex, eIF3m"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0071540
            "eukaryotic translation initiation factor 3 complex, eIF3e"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002188
            "translation reinitiation" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 InterPro:IPR017334 Pfam:PF00076
            PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00360 CGD:CAL0003839
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003743
            eggNOG:COG0724 HSSP:O75821 KO:K03248 HAMAP:MF_03006
            InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353 EMBL:AACQ01000092
            RefSeq:XP_715036.1 ProteinModelPortal:Q59ZV5 STRING:Q59ZV5
            GeneID:3643308 KEGG:cal:CaO19.7236 Uniprot:Q59ZV5
        Length = 279

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 88/263 (33%), Positives = 130/263 (49%)

Query:    31 PPKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDA 90
             PP+ +  PD  G K VI ++ N DG KVKI    +  K+   ++     +R+NW K+G  
Sbjct:    19 PPEVIANPD--GTKTVITFRTNQDGKKVKITQKIKEVKVQE-KVHPLIAQRKNWKKYGKE 75

Query:    91 VREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMV-CRTCGKKG 149
                  G   +     E  ++       K +E K   D   +  +  AV  + CR CG  G
Sbjct:    76 KNSPPGPDTSTTQLGE-KVDLKLGTSWKQDEKKEEEDKAHERAQKIAVQTIKCRVCG--G 132

Query:   150 DHWTSRCPFKDL--AAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRR 207
             DH+T++CPFKD   AA   T                   G YVP  +RA A         
Sbjct:   133 DHYTAKCPFKDTLGAAAGVTPSGTTPEPTSEGGAGAAGAGKYVPRHLRADANGNVPTREA 192

Query:   208 RNDENSVRVTNLSEDTREPDLL--ELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKED 265
             R+D  +++V+ L+    E D+L  ELF  FG + RV +  +++TG SRGF +V+F  +E 
Sbjct:   193 RDDSTTLKVSQLNSFVDE-DMLRNELFAKFGPLQRVTIVRNRETGESRGFAYVSFATEEI 251

Query:   266 AQRAINKLNGYGYDNLILRVEWA 288
             AQRA++  NG GY +LIL +EW+
Sbjct:   252 AQRALDTFNGKGYHSLILHLEWS 274


>WB|WBGene00001230 [details] [associations]
            symbol:eif-3.G species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0040010
            "positive regulation of growth rate" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0010171 "body morphogenesis" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR001878 InterPro:IPR012677
            InterPro:IPR017334 Pfam:PF00076 PIRSF:PIRSF037949 PROSITE:PS50102
            SMART:SM00343 SMART:SM00360 GO:GO:0009792 GO:GO:0005737
            GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0000166
            GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0010171 GO:GO:0000003
            GO:GO:0003743 EMBL:Z50044 eggNOG:COG0724
            GeneTree:ENSGT00510000047802 KO:K03248 HAMAP:MF_03006
            InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353
            HOGENOM:HOG000239560 PIR:T21238 RefSeq:NP_495778.1
            ProteinModelPortal:Q19706 SMR:Q19706 STRING:Q19706 PaxDb:Q19706
            EnsemblMetazoa:F22B5.2.1 EnsemblMetazoa:F22B5.2.2
            EnsemblMetazoa:F22B5.2.3 GeneID:174346 KEGG:cel:CELE_F22B5.2
            CTD:174346 WormBase:F22B5.2 InParanoid:Q19706 OMA:TRTETAF
            NextBio:883648 Uniprot:Q19706
        Length = 256

 Score = 235 (87.8 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
 Identities = 55/150 (36%), Positives = 82/150 (54%)

Query:   142 CRTCGKKGDHWTSRCPFKDL-AAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAER 200
             CR C K  DHW++ CP+K +     E   DK             T+   +  GMR    +
Sbjct:   121 CRHC-KGNDHWSTHCPYKVMYQLDEEADADKD------------TEKDRMAMGMRPDGRQ 167

Query:   201 TGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 260
                  R R+DEN+ RVTNL ++  E +L +LF   G V R+++A D+ TG+ +GF FV F
Sbjct:   168 ID---RNRSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTF 224

Query:   261 VNKEDAQRAINKLNGYGYDNLILRVEWATP 290
              +++DA RAI +LN     +++L+VEW  P
Sbjct:   225 ESRDDAARAIAELNDIRMYHMVLKVEWTRP 254

 Score = 101 (40.6 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
 Identities = 33/116 (28%), Positives = 53/116 (45%)

Query:    48 EYKFND-DGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRL-TMVSTE 105
             E  F + DG + K+    +V    N R+ K   +R+ W KFG    E  G ++ T    E
Sbjct:    32 ETAFTEVDGVRWKVVTQFKV---INKRVPKVVADRKKWVKFGSCKGEPAGPQVATTYVAE 88

Query:   106 EILLE--RPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFK 159
             E+ ++  R RA G +  + +    +     +       CR C K  DHW++ CP+K
Sbjct:    89 EVDMQFTRNRA-GEQILDVQEDKQTAKTTSREH-----CRHC-KGNDHWSTHCPYK 137


>SGD|S000002837 [details] [associations]
            symbol:TIF35 "eIF3g subunit of the eukaryotic translation
            initiation factor 3 (eIF3)" species:4932 "Saccharomyces cerevisiae"
            [GO:0005852 "eukaryotic translation initiation factor 3 complex"
            evidence=IDA;IPI] [GO:0003743 "translation initiation factor
            activity" evidence=IEA;IDA] [GO:0006413 "translational initiation"
            evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0002188 "translation
            reinitiation" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
            InterPro:IPR017334 Pfam:PF00076 PIRSF:PIRSF037949 PROSITE:PS50102
            SMART:SM00360 SGD:S000002837 EMBL:U33007 GO:GO:0000166
            Gene3D:3.30.70.330 EMBL:BK006938 GO:GO:0003743 eggNOG:COG0724
            GO:GO:0005852 GeneTree:ENSGT00510000047802 KO:K03248 HAMAP:MF_03006
            InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353 GO:GO:0002188
            HOGENOM:HOG000239560 OMA:NSEFDAP OrthoDB:EOG4QJVX7 EMBL:AF004913
            PIR:S69710 RefSeq:NP_010717.1 ProteinModelPortal:Q04067 SMR:Q04067
            DIP:DIP-1704N IntAct:Q04067 MINT:MINT-411912 STRING:Q04067
            PaxDb:Q04067 PeptideAtlas:Q04067 EnsemblFungi:YDR429C GeneID:852039
            KEGG:sce:YDR429C CYGD:YDR429c NextBio:970284 Genevestigator:Q04067
            GermOnline:YDR429C Uniprot:Q04067
        Length = 274

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 93/277 (33%), Positives = 136/277 (49%)

Query:    32 PKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAV 91
             P+++I  + +G + +I YK  +DG K KI    +  K+   ++ K   ER+NW K+G   
Sbjct:     6 PEEII-ENADGSRSIITYKI-EDGVKYKITQKVKEVKVLE-KVHKSVAERKNWHKYGSEK 62

Query:    92 REDVG-SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGD 150
                 G S +T    EE+ L   R    + EE +   +  A L K G   + CR CG   D
Sbjct:    63 GSPAGPSAVTARLGEEVELRLSRN-WKQAEEERIQKEK-ASLTKTG---LQCRLCGN--D 115

Query:   151 HWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-----------GTYVPPGMRAGAE 199
             H T  CPFK + +      D P             K           G YVPP  RAGA 
Sbjct:   116 HMTMNCPFKTILSELSALED-PATNEGGVEAASEEKAGQVGGAGSIPGQYVPPSRRAGAR 174

Query:   200 RTGTDM----RRRNDENSVRVTNLSEDTREPDLLE-LFRPFGAVSRVYVAVDQKTGISRG 254
                +D     R R+D  ++++  ++E+  E  L E L  PF  + RV V  +++TG SRG
Sbjct:   175 DPSSDAYRDSRERDDMCTLKIMQVNENADENSLREELLFPFAPIPRVSVVRNKETGKSRG 234

Query:   255 FGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 291
               FV F ++E A++A+  L+G GY NLILRVEW+ P+
Sbjct:   235 LAFVTFSSEEVAEQALRFLDGRGYMNLILRVEWSKPK 271


>UNIPROTKB|K7EL20 [details] [associations]
            symbol:EIF3G "Eukaryotic translation initiation factor 3
            subunit G" species:9606 "Homo sapiens" [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] InterPro:IPR017334 PIRSF:PIRSF037949 EMBL:AC020931
            InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353 HGNC:HGNC:3274
            Ensembl:ENST00000588709 Uniprot:K7EL20
        Length = 263

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 79/219 (36%), Positives = 111/219 (50%)

Query:    31 PPKQVIGPDENG-VKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGD 89
             PPK+VI    NG +K V EYK ++DG K K+    R  ++   + SK    R+NW KFG+
Sbjct:    55 PPKEVI----NGNIKTVTEYKIDEDGKKFKVRIV-RTFRIETRKASKAVARRKNWKKFGN 109

Query:    90 AVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKG 149
             +  +  G  +   +  + +         +    +   D + +L KG  ++  CR C  KG
Sbjct:   110 SEFDPPGPNVATTTVSDDV-SMTFITSKEDLNCQEEEDPMNKL-KGQKIVS-CRIC--KG 164

Query:   150 DHWTSRCPFKDLAAPAETFI-----------DKPXXXXXXXXXXXXTKGTYVPPGMRAGA 198
             DHWT+RCP+KD   P +  +           +K               G YVPP +R GA
Sbjct:   165 DHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGA 224

Query:   199 ERTGTDMR--RRNDENS-VRVTNLSEDTREPDLLELFRP 234
              R G  M+  RR D+N+ +RVTNLSEDTRE DL ELFRP
Sbjct:   225 SRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRP 263


>UNIPROTKB|K7EP16 [details] [associations]
            symbol:EIF3G "Eukaryotic translation initiation factor 3
            subunit G" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR017334
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 Gene3D:3.30.70.330
            EMBL:AC020931 PANTHER:PTHR10352 HGNC:HGNC:3274
            Ensembl:ENST00000593054 Uniprot:K7EP16
        Length = 118

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 58/107 (54%), Positives = 73/107 (68%)

Query:   187 GTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVD 246
             G YVPP +R GA R G  M+           N  EDTRE DL ELFRPFG++SR+Y+A D
Sbjct:    22 GKYVPPSLRDGASRRGESMQ----------PNRREDTRETDLQELFRPFGSISRIYLAKD 71

Query:   247 QKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN 293
             + TG S+GF F++F  +EDA RAI  ++G+GYD+LIL VEWA P TN
Sbjct:    72 KTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSTN 118


>UNIPROTKB|K7ER90 [details] [associations]
            symbol:EIF3G "Eukaryotic translation initiation factor 3
            subunit G" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR012677 InterPro:IPR017334 PIRSF:PIRSF037949
            Gene3D:3.30.70.330 EMBL:AC020931 InterPro:IPR024675
            PANTHER:PTHR10352 Pfam:PF12353 HGNC:HGNC:3274
            Ensembl:ENST00000587146 Uniprot:K7ER90
        Length = 227

 Score = 217 (81.4 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
 Identities = 51/114 (44%), Positives = 63/114 (55%)

Query:   136 GAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFI-----------DKPXXXXXXXXXXXX 184
             G  ++ CR C  KGDHWT+RCP+KD   P +  +           +K             
Sbjct:   116 GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQN 173

Query:   185 TKGTYVPPGMRAGAERTGTDMR--RRNDENS-VRVTNLSEDTREPDLLELFRPF 235
               G YVPP +R GA R G  M+  RR D+N+ +RVTNLSEDTRE DL ELFRPF
Sbjct:   174 KTGKYVPPSLRDGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPF 227

 Score = 82 (33.9 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
 Identities = 22/53 (41%), Positives = 30/53 (56%)

Query:    31 PPKQVIGPDENG-VKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERR 82
             PPK+VI    NG +K V EYK ++DG K KI    R+      R + +A+ RR
Sbjct:    55 PPKEVI----NGNIKTVTEYKIDEDGKKFKIVRTFRIE----TRKASKAVARR 99


>DICTYBASE|DDB_G0279549 [details] [associations]
            symbol:eif3G "eukaryotic translation initiation
            factor 3 (eIF3) subunit G" species:44689 "Dictyostelium discoideum"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=ISS] [GO:0006413
            "translational initiation" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0044351 "macropinocytosis"
            evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
            InterPro:IPR017334 Pfam:PF00076 PIRSF:PIRSF037949 PROSITE:PS50102
            SMART:SM00360 dictyBase:DDB_G0279549 GO:GO:0000166
            GenomeReviews:CM000152_GR Gene3D:3.30.70.330 GO:GO:0003743
            EMBL:AAFI02000031 eggNOG:COG0724 GO:GO:0005852 HSSP:O75821
            KO:K03248 HAMAP:MF_03006 InterPro:IPR024675 PANTHER:PTHR10352
            Pfam:PF12353 OMA:LILCVEW RefSeq:XP_641693.1
            ProteinModelPortal:Q54WM4 STRING:Q54WM4 PRIDE:Q54WM4
            EnsemblProtists:DDB0233922 GeneID:8622102 KEGG:ddi:DDB_G0279549
            Uniprot:Q54WM4
        Length = 233

 Score = 209 (78.6 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
 Identities = 52/151 (34%), Positives = 83/151 (54%)

Query:   142 CRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERT 201
             CR C K  +H+T++CP+KD    A     +P                Y+ P +R G   T
Sbjct:    94 CRICKK--NHFTTKCPYKD----ALELTTQPQKSEKEEKPIS---NKYIAPNLRGGY--T 142

Query:   202 GTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFV 261
             G+     +D  S+ V+NLS++  E DL ELF  FG VSRV +    + G S+GF +V + 
Sbjct:   143 GS-APSGSDVPSIMVSNLSQNATEKDLYELFGQFGPVSRVSIPKSME-GSSKGFAYVTYN 200

Query:   262 NKEDAQRAINKLNGYGYDNLILRVEWATPRT 292
             + + A++A+ +LNG+ YD L+L +E+A  ++
Sbjct:   201 HLDSAEKALKQLNGHRYDYLVLSLEFAKKKS 231

 Score = 70 (29.7 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
 Identities = 23/80 (28%), Positives = 38/80 (47%)

Query:    43 VKKVIEYKF-NDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTM 101
             ++K IE    ND G +VK+    +  ++   R +++  ER+ W KFG+   +  G   T 
Sbjct:    12 IEKTIEVIVKNDKGEEVKVIKRYQEYQITVKR-NRKVDERKKWKKFGECDNK-TGLENTA 69

Query:   102 VSTEEILLERPRAPGSKPEE 121
                E+ L+   R    K EE
Sbjct:    70 YGDEQFLV-LTRGAEVKEEE 88


>GENEDB_PFALCIPARUM|MAL8P1.83 [details] [associations]
            symbol:MAL8P1.83 "eukaryotictranslation
            initiation factor, putative" species:5833 "Plasmodium falciparum"
            [GO:0006412 "translation" evidence=ISS] [GO:0003743 "translation
            initiation factor activity" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 InterPro:IPR017334 Pfam:PF00076
            PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003743 HSSP:P19339
            KO:K03248 PANTHER:PTHR10352 HOGENOM:HOG000239560 EMBL:AL844507
            RefSeq:XP_001349368.1 ProteinModelPortal:Q8IAZ3 IntAct:Q8IAZ3
            MINT:MINT-1709542 EnsemblProtists:MAL8P1.83:mRNA GeneID:2655434
            KEGG:pfa:MAL8P1.83 EuPathDB:PlasmoDB:PF3D7_0815600 OMA:WAKPSNR
            ProtClustDB:CLSZ2435783 Uniprot:Q8IAZ3
        Length = 266

 Score = 211 (79.3 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
 Identities = 44/99 (44%), Positives = 64/99 (64%)

Query:   195 RAGAERTGTDMR---RRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGI 251
             +A   R G   R    +N E +VRVTNLSED  E +L  LF   G + R+++A  ++T  
Sbjct:   165 KAAGRREGLYYRPHDTQNKECTVRVTNLSEDVNENELSNLFGKVGNIVRMFLAKHKETQN 224

Query:   252 SRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
             S+GF F+ +  +E+A+RAI KLN +G++NL+L VEWA P
Sbjct:   225 SKGFAFITYSKREEAKRAIEKLNRHGFENLLLSVEWAKP 263

 Score = 51 (23.0 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
 Identities = 19/75 (25%), Positives = 35/75 (46%)

Query:    40 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLA-NARLSKRALERRNWAKFGDAVREDVGSR 98
             ENG+K V +Y      N  K     +++++    +L+K    R N   F      D+ S 
Sbjct:    50 ENGIKVVTKYS----ENLKKQTVTKKIQEVVIKKKLNKEINNRLNLKNFNI----DIHSS 101

Query:    99 LTMVSTEEILLERPR 113
             +T+  T+ + +E P+
Sbjct:   102 VTVEPTDVVNIEVPK 116


>UNIPROTKB|Q8IAZ3 [details] [associations]
            symbol:MAL8P1.83 "Eukaryotic translation initiation factor
            3 subunit G" species:36329 "Plasmodium falciparum 3D7" [GO:0003743
            "translation initiation factor activity" evidence=ISS] [GO:0006412
            "translation" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            InterPro:IPR017334 Pfam:PF00076 PIRSF:PIRSF037949 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003743 HSSP:P19339 KO:K03248 PANTHER:PTHR10352
            HOGENOM:HOG000239560 EMBL:AL844507 RefSeq:XP_001349368.1
            ProteinModelPortal:Q8IAZ3 IntAct:Q8IAZ3 MINT:MINT-1709542
            EnsemblProtists:MAL8P1.83:mRNA GeneID:2655434 KEGG:pfa:MAL8P1.83
            EuPathDB:PlasmoDB:PF3D7_0815600 OMA:WAKPSNR ProtClustDB:CLSZ2435783
            Uniprot:Q8IAZ3
        Length = 266

 Score = 211 (79.3 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
 Identities = 44/99 (44%), Positives = 64/99 (64%)

Query:   195 RAGAERTGTDMR---RRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGI 251
             +A   R G   R    +N E +VRVTNLSED  E +L  LF   G + R+++A  ++T  
Sbjct:   165 KAAGRREGLYYRPHDTQNKECTVRVTNLSEDVNENELSNLFGKVGNIVRMFLAKHKETQN 224

Query:   252 SRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
             S+GF F+ +  +E+A+RAI KLN +G++NL+L VEWA P
Sbjct:   225 SKGFAFITYSKREEAKRAIEKLNRHGFENLLLSVEWAKP 263

 Score = 51 (23.0 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
 Identities = 19/75 (25%), Positives = 35/75 (46%)

Query:    40 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLA-NARLSKRALERRNWAKFGDAVREDVGSR 98
             ENG+K V +Y      N  K     +++++    +L+K    R N   F      D+ S 
Sbjct:    50 ENGIKVVTKYS----ENLKKQTVTKKIQEVVIKKKLNKEINNRLNLKNFNI----DIHSS 101

Query:    99 LTMVSTEEILLERPR 113
             +T+  T+ + +E P+
Sbjct:   102 VTVEPTDVVNIEVPK 116


>ZFIN|ZDB-GENE-050417-329 [details] [associations]
            symbol:zgc:112425 "zgc:112425" species:7955 "Danio
            rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-050417-329 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 eggNOG:COG0724 HOVERGEN:HBG107480 KO:K13195
            HOGENOM:HOG000276232 OrthoDB:EOG4HHP40 GeneTree:ENSGT00700000104309
            OMA:GNNSGGY EMBL:CABZ01088879 EMBL:CABZ01088880 EMBL:BC093299
            EMBL:BC095030 IPI:IPI00570286 RefSeq:NP_001017797.1
            UniGene:Dr.75965 SMR:Q566W6 STRING:Q566W6
            Ensembl:ENSDART00000093068 Ensembl:ENSDART00000113350 GeneID:550495
            KEGG:dre:550495 NextBio:20879737 Uniprot:Q566W6
        Length = 185

 Score = 154 (59.3 bits), Expect = 5.7e-11, P = 5.7e-11
 Identities = 32/80 (40%), Positives = 49/80 (61%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + +  LS DT E  L + F  +G ++ V+VA +++T  SRGFGFV F N +DA+ 
Sbjct:     2 SDEGKLFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKD 61

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    62 ALEGMNGKSVDGRTIRVDEA 81


>UNIPROTKB|H9KZV5 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003730
            "mRNA 3'-UTR binding" evidence=IEA] [GO:0009411 "response to UV"
            evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0030371 "translation repressor activity"
            evidence=IEA] [GO:0034063 "stress granule assembly" evidence=IEA]
            [GO:0045727 "positive regulation of translation" evidence=IEA]
            [GO:0048255 "mRNA stabilization" evidence=IEA] [GO:0070181 "SSU
            rRNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 OMA:ENRSRGY
            GeneTree:ENSGT00700000104309 EMBL:AADN02030141 EMBL:AADN02030142
            Ensembl:ENSGALT00000019966 Uniprot:H9KZV5
        Length = 190

 Score = 152 (58.6 bits), Expect = 9.7e-11, P = 9.7e-11
 Identities = 34/79 (43%), Positives = 47/79 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ A
Sbjct:     4 DEGKLLVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63

Query:   270 INKLNGYGYDNLILRVEWA 288
             +  +NG   D   +RV+ A
Sbjct:    64 MMAMNGKSVDGRQIRVDQA 82


>UNIPROTKB|H9L0U4 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 EMBL:AADN02030141 EMBL:AADN02030142
            Ensembl:ENSGALT00000029134 Uniprot:H9L0U4
        Length = 167

 Score = 152 (58.6 bits), Expect = 9.7e-11, P = 9.7e-11
 Identities = 34/79 (43%), Positives = 47/79 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ A
Sbjct:     4 DEGKLLVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63

Query:   270 INKLNGYGYDNLILRVEWA 288
             +  +NG   D   +RV+ A
Sbjct:    64 MMAMNGKSVDGRQIRVDQA 82


>UNIPROTKB|H9L3B3 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 EMBL:AADN02030141 EMBL:AADN02030142
            Ensembl:ENSGALT00000036191 Uniprot:H9L3B3
        Length = 172

 Score = 152 (58.6 bits), Expect = 9.7e-11, P = 9.7e-11
 Identities = 34/79 (43%), Positives = 47/79 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ A
Sbjct:     4 DEGKLLVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63

Query:   270 INKLNGYGYDNLILRVEWA 288
             +  +NG   D   +RV+ A
Sbjct:    64 MMAMNGKSVDGRQIRVDQA 82


>UNIPROTKB|E2R6G2 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            ProteinModelPortal:E2R6G2 Ensembl:ENSCAFT00000031013 Uniprot:E2R6G2
        Length = 172

 Score = 152 (58.6 bits), Expect = 9.7e-11, P = 9.7e-11
 Identities = 34/80 (42%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMMAMNGKSVDGRQIRVDQA 82


>UNIPROTKB|F6XHA7 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K13195 CTD:1153
            OMA:ENRSRGY GeneTree:ENSGT00700000104309 Ensembl:ENSCAFT00000031013
            EMBL:AAEX03012655 RefSeq:XP_868600.1 GeneID:476755 KEGG:cfa:476755
            Uniprot:F6XHA7
        Length = 185

 Score = 152 (58.6 bits), Expect = 9.7e-11, P = 9.7e-11
 Identities = 34/80 (42%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMMAMNGKSVDGRQIRVDQA 82


>UNIPROTKB|K7EJV5 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000588411 Uniprot:K7EJV5
        Length = 105

 Score = 152 (58.6 bits), Expect = 9.7e-11, P = 9.7e-11
 Identities = 34/80 (42%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMMAMNGKSVDGRQIRVDQA 82


>UNIPROTKB|K7EMY9 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000586548 Uniprot:K7EMY9
        Length = 159

 Score = 152 (58.6 bits), Expect = 9.7e-11, P = 9.7e-11
 Identities = 34/80 (42%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMMAMNGKSVDGRQIRVDQA 82


>UNIPROTKB|K7EPM4 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000585913 Ensembl:ENST00000586636
            Ensembl:ENST00000586773 Ensembl:ENST00000589235
            Ensembl:ENST00000589686 Ensembl:ENST00000591935 Uniprot:K7EPM4
        Length = 168

 Score = 152 (58.6 bits), Expect = 9.7e-11, P = 9.7e-11
 Identities = 34/80 (42%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMMAMNGKSVDGRQIRVDQA 82


>UNIPROTKB|K7EQR7 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000585914 Uniprot:K7EQR7
        Length = 202

 Score = 152 (58.6 bits), Expect = 9.7e-11, P = 9.7e-11
 Identities = 34/80 (42%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMMAMNGKSVDGRQIRVDQA 82


>UNIPROTKB|K7ER40 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000591659 Uniprot:K7ER40
        Length = 174

 Score = 152 (58.6 bits), Expect = 9.7e-11, P = 9.7e-11
 Identities = 34/80 (42%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMMAMNGKSVDGRQIRVDQA 82


>UNIPROTKB|Q14011 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISS;IDA] [GO:0048255 "mRNA stabilization"
            evidence=IDA] [GO:0070181 "SSU rRNA binding" evidence=IDA]
            [GO:0030371 "translation repressor activity" evidence=ISS]
            [GO:0034063 "stress granule assembly" evidence=ISS] [GO:0009411
            "response to UV" evidence=IDA] [GO:0010494 "cytoplasmic stress
            granule" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0003730 "mRNA
            3'-UTR binding" evidence=IDA] [GO:0045727 "positive regulation of
            translation" evidence=IDA] [GO:0009409 "response to cold"
            evidence=TAS] [GO:0017148 "negative regulation of translation"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0009411
            GO:GO:0005654 GO:GO:0000166 GO:GO:0030371 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
            GO:GO:0010494 GO:GO:0034063 eggNOG:COG0724 HOVERGEN:HBG107480
            GO:GO:0070181 KO:K13195 CTD:1153 EMBL:D78134 EMBL:AF021336
            EMBL:AC004258 EMBL:BC000403 EMBL:BC000901 IPI:IPI00641579
            RefSeq:NP_001271.1 UniGene:Hs.618145 UniGene:Hs.634522 PDB:1X5S
            PDBsum:1X5S ProteinModelPortal:Q14011 SMR:Q14011 IntAct:Q14011
            MINT:MINT-5004534 STRING:Q14011 PhosphoSite:Q14011 DMDM:5921786
            REPRODUCTION-2DPAGE:IPI00180954 PaxDb:Q14011 PRIDE:Q14011
            DNASU:1153 Ensembl:ENST00000320936 GeneID:1153 KEGG:hsa:1153
            UCSC:uc002lrr.4 GeneCards:GC19P001269 HGNC:HGNC:1982 MIM:602649
            neXtProt:NX_Q14011 PharmGKB:PA26519 HOGENOM:HOG000276232
            InParanoid:Q14011 OMA:ENRSRGY OrthoDB:EOG4HHP40 PhylomeDB:Q14011
            ChiTaRS:CIRBP EvolutionaryTrace:Q14011 GenomeRNAi:1153 NextBio:4788
            ArrayExpress:Q14011 Bgee:Q14011 CleanEx:HS_CIRBP
            Genevestigator:Q14011 GermOnline:ENSG00000099622 Uniprot:Q14011
        Length = 172

 Score = 152 (58.6 bits), Expect = 9.7e-11, P = 9.7e-11
 Identities = 34/80 (42%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMMAMNGKSVDGRQIRVDQA 82


>UNIPROTKB|F1S6R1 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0070181 "SSU rRNA binding" evidence=IEA] [GO:0048255
            "mRNA stabilization" evidence=IEA] [GO:0045727 "positive regulation
            of translation" evidence=IEA] [GO:0034063 "stress granule assembly"
            evidence=IEA] [GO:0030371 "translation repressor activity"
            evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009411 GO:GO:0000166 GO:GO:0030371 Gene3D:3.30.70.330
            GO:GO:0048255 GO:GO:0003730 GO:GO:0045727 GO:GO:0010494
            GO:GO:0034063 GO:GO:0070181 OMA:ENRSRGY
            GeneTree:ENSGT00700000104309 EMBL:CU929580
            Ensembl:ENSSSCT00000014671 Uniprot:F1S6R1
        Length = 172

 Score = 152 (58.6 bits), Expect = 9.7e-11, P = 9.7e-11
 Identities = 34/80 (42%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMMAMNGKSVDGRQIRVDQA 82


>UNIPROTKB|Q5RF83 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9601 "Pongo abelii" [GO:0003730 "mRNA 3'-UTR binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0009411 "response to UV"
            evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
            evidence=ISS] [GO:0017148 "negative regulation of translation"
            evidence=ISS] [GO:0030371 "translation repressor activity"
            evidence=ISS] [GO:0034063 "stress granule assembly" evidence=ISS]
            [GO:0045727 "positive regulation of translation" evidence=ISS]
            [GO:0048255 "mRNA stabilization" evidence=ISS] [GO:0070181 "SSU
            rRNA binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0009411 GO:GO:0005654 GO:GO:0006950 GO:GO:0000166
            GO:GO:0030371 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
            GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 HOVERGEN:HBG107480
            GO:GO:0070181 KO:K13195 CTD:1153 EMBL:CR857278
            RefSeq:NP_001124692.1 UniGene:Pab.19491 ProteinModelPortal:Q5RF83
            SMR:Q5RF83 PRIDE:Q5RF83 GeneID:100171539 KEGG:pon:100171539
            Uniprot:Q5RF83
        Length = 172

 Score = 152 (58.6 bits), Expect = 9.7e-11, P = 9.7e-11
 Identities = 34/80 (42%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMMAMNGKSVDGRQIRVDQA 82


>DICTYBASE|DDB_G0286007 [details] [associations]
            symbol:rbm8A "RNA-binding motif protein 8A"
            species:44689 "Dictyostelium discoideum" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 dictyBase:DDB_G0286007
            GenomeReviews:CM000153_GR GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 KO:K12876 EMBL:AAFI02000084 eggNOG:NOG246776
            RefSeq:XP_637941.1 ProteinModelPortal:Q54ME8 SMR:Q54ME8
            STRING:Q54ME8 EnsemblProtists:DDB0233616 GeneID:8625394
            KEGG:ddi:DDB_G0286007 InParanoid:Q54ME8 OMA:SERYSGK Uniprot:Q54ME8
        Length = 187

 Score = 151 (58.2 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 23/73 (31%), Positives = 47/73 (64%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V N+ E+ +EPDL+++F  +G +  +++ +D++TG ++G+  + +  + +A+ AI   +G
Sbjct:    75 VRNIQEEVQEPDLMDIFAEYGQIKNIHLNIDRRTGFTKGYALIEYEKRSEAEDAIKNGSG 134

Query:   276 YGYDNLILRVEWA 288
             Y    L L V+WA
Sbjct:   135 YELAGLKLSVDWA 147


>UNIPROTKB|K7ENX8 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000589266 Uniprot:K7ENX8
        Length = 89

 Score = 150 (57.9 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 33/78 (42%), Positives = 47/78 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNGYGYDNLILRVE 286
             A+  +NG   D   +RV+
Sbjct:    63 AMMAMNGKSVDGRQIRVD 80


>UNIPROTKB|P60826 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:10029 "Cricetulus griseus" [GO:0003730 "mRNA 3'-UTR
            binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0009411 "response to UV"
            evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
            evidence=ISS] [GO:0017148 "negative regulation of translation"
            evidence=ISS] [GO:0030371 "translation repressor activity"
            evidence=ISS] [GO:0034063 "stress granule assembly" evidence=ISS]
            [GO:0045727 "positive regulation of translation" evidence=ISS]
            [GO:0048255 "mRNA stabilization" evidence=ISS] [GO:0070181 "SSU
            rRNA binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0009411 GO:GO:0005654 GO:GO:0006950 GO:GO:0000166
            GO:GO:0030371 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
            GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 HOVERGEN:HBG107480
            GO:GO:0070181 EMBL:AY359860 RefSeq:NP_001231002.1
            ProteinModelPortal:P60826 SMR:P60826 PRIDE:P60826 GeneID:100689075
            CTD:1153 Uniprot:P60826
        Length = 172

 Score = 150 (57.9 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 34/80 (42%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMMAMNGKSVDGRQIRVDQA 82


>UNIPROTKB|Q9DED4 [details] [associations]
            symbol:cirbp-b "Cold-inducible RNA-binding protein B"
            species:8355 "Xenopus laevis" [GO:0003729 "mRNA binding"
            evidence=IDA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007369
            "gastrulation" evidence=IMP] [GO:0009409 "response to cold"
            evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
            [GO:0016477 "cell migration" evidence=IMP] [GO:0019899 "enzyme
            binding" evidence=IPI] [GO:0022008 "neurogenesis" evidence=IMP]
            [GO:0045727 "positive regulation of translation" evidence=ISS]
            [GO:0048255 "mRNA stabilization" evidence=IGI;IMP] [GO:0048793
            "pronephros development" evidence=ISS] [GO:0060212 "negative
            regulation of nuclear-transcribed mRNA poly(A) tail shortening"
            evidence=IMP] [GO:0005840 "ribosome" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0005654
            GO:GO:0016477 GO:GO:0022008 GO:GO:0000166 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
            GO:GO:0007369 GO:GO:0048793 HOVERGEN:HBG107480 GO:GO:0060212
            EMBL:AB044535 EMBL:BC054250 RefSeq:NP_001079794.1 UniGene:Xl.8151
            HSSP:P09651 ProteinModelPortal:Q9DED4 SMR:Q9DED4 MINT:MINT-274223
            PRIDE:Q9DED4 GeneID:379484 KEGG:xla:379484 CTD:379484
            Xenbase:XB-GENE-492785 KO:K13195 Uniprot:Q9DED4
        Length = 166

 Score = 150 (57.9 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 32/80 (40%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + +  L+ DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     2 SDEGKLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKD 61

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    62 AMMAMNGKAVDGRQIRVDQA 81


>MGI|MGI:893588 [details] [associations]
            symbol:Cirbp "cold inducible RNA binding protein"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR
            binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006950 "response to
            stress" evidence=IEA] [GO:0009411 "response to UV" evidence=ISO]
            [GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0017148
            "negative regulation of translation" evidence=IDA] [GO:0030371
            "translation repressor activity" evidence=IDA] [GO:0034063 "stress
            granule assembly" evidence=IDA] [GO:0045727 "positive regulation of
            translation" evidence=ISO] [GO:0048255 "mRNA stabilization"
            evidence=ISO] [GO:0070181 "SSU rRNA binding" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:893588 GO:GO:0005634 GO:GO:0009411
            GO:GO:0005654 GO:GO:0000166 GO:GO:0030371 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
            GO:GO:0010494 GO:GO:0034063 eggNOG:COG0724 HOVERGEN:HBG107480
            GO:GO:0070181 KO:K13195 CTD:1153 HOGENOM:HOG000276232 OMA:ENRSRGY
            OrthoDB:EOG4HHP40 ChiTaRS:CIRBP EMBL:D78135 EMBL:AK014655
            EMBL:AK132584 EMBL:BC075699 IPI:IPI00121073 RefSeq:NP_031731.1
            UniGene:Mm.17898 ProteinModelPortal:P60824 SMR:P60824 STRING:P60824
            PhosphoSite:P60824 PaxDb:P60824 PRIDE:P60824
            Ensembl:ENSMUST00000105365 GeneID:12696 KEGG:mmu:12696
            UCSC:uc007gce.1 GeneTree:ENSGT00700000104309 InParanoid:P60824
            NextBio:281950 Bgee:P60824 CleanEx:MM_CIRBP Genevestigator:P60824
            GermOnline:ENSMUSG00000045193 Uniprot:P60824
        Length = 172

 Score = 150 (57.9 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 34/80 (42%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMMAMNGKSVDGRQIRVDQA 82


>RGD|620756 [details] [associations]
            symbol:Cirbp "cold inducible RNA binding protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=ISO;ISS] [GO:0005634
            "nucleus" evidence=ISO;ISS] [GO:0005654 "nucleoplasm" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0009409 "response to
            cold" evidence=IEP] [GO:0009411 "response to UV" evidence=ISO;ISS]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISO;ISS]
            [GO:0017148 "negative regulation of translation" evidence=ISO]
            [GO:0030371 "translation repressor activity" evidence=ISO;ISS]
            [GO:0034063 "stress granule assembly" evidence=ISO;ISS] [GO:0045727
            "positive regulation of translation" evidence=ISO;ISS] [GO:0048255
            "mRNA stabilization" evidence=ISO;ISS] [GO:0070181 "SSU rRNA
            binding" evidence=ISO;ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:620756 GO:GO:0005634
            GO:GO:0009411 GO:GO:0005654 GO:GO:0000166 GO:GO:0030371
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
            GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 eggNOG:COG0724
            HOVERGEN:HBG107480 GO:GO:0070181 HOGENOM:HOG000276232
            OrthoDB:EOG4HHP40 GeneTree:ENSGT00700000104309 EMBL:AB000362
            IPI:IPI00201031 UniGene:Rn.28931 ProteinModelPortal:P60825
            SMR:P60825 IntAct:P60825 STRING:P60825 PRIDE:P60825
            Ensembl:ENSRNOT00000021648 UCSC:RGD:620756 InParanoid:P60825
            Genevestigator:P60825 GermOnline:ENSRNOG00000015999 Uniprot:P60825
        Length = 172

 Score = 150 (57.9 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 34/80 (42%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMMAMNGKSVDGRQIRVDQA 82


>UNIPROTKB|Q96B58 [details] [associations]
            symbol:TIA1 "TIA1 cytotoxic granule-associated RNA binding
            protein, isoform CRA_d" species:9606 "Homo sapiens" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CH471053
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG002295
            HSSP:P11940 EMBL:AC016700 UniGene:Hs.413123 HGNC:HGNC:11802
            ChiTaRS:TIA1 EMBL:BC015944 IPI:IPI00743479 SMR:Q96B58 STRING:Q96B58
            Ensembl:ENST00000416149 UCSC:uc002sgm.3 Uniprot:Q96B58
        Length = 214

 Score = 153 (58.9 bits), Expect = 4.5e-10, P = 4.5e-10
 Identities = 34/89 (38%), Positives = 46/89 (51%)

Query:   201 TGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 260
             T    +R  D   V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F
Sbjct:    95 TVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSF 154

Query:   261 VNKEDAQRAINKLNGYGYDNLILRVEWAT 289
              NK DA+ AI ++ G       +R  WAT
Sbjct:   155 FNKWDAENAIQQMGGQWLGGRQIRTNWAT 183


>UNIPROTKB|B4DQI6 [details] [associations]
            symbol:TRA2A "cDNA FLJ50614, highly similar to
            Transformer-2 protein homolog" species:9606 "Homo sapiens"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG107480 IPI:IPI00220447
            UniGene:Hs.445652 HGNC:HGNC:16645 ChiTaRS:TRA2A EMBL:AC023105
            EMBL:AK298815 SMR:B4DQI6 STRING:B4DQI6 Ensembl:ENST00000392502
            Uniprot:B4DQI6
        Length = 180

 Score = 146 (56.5 bits), Expect = 4.9e-10, P = 4.9e-10
 Identities = 38/96 (39%), Positives = 54/96 (56%)

Query:   200 RTGTDMRRRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFV 258
             R  T  R   D N+ + V  LS  T E DL E+F  +G +S V V  DQ+TG SRGF FV
Sbjct:     5 RRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 64

Query:   259 NFVNKEDAQRAINKLNGYGYDNLILRVEWA-TPRTN 293
              F   +D++ A+ + NG   D   +RV+++ T R +
Sbjct:    65 YFERIDDSKEAMERANGMELDGRRIRVDYSITKRAH 100


>UNIPROTKB|B4DUA9 [details] [associations]
            symbol:TRA2A "Transformer-2 protein homolog alpha"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HOVERGEN:HBG107480 UniGene:Hs.445652 HGNC:HGNC:16645 ChiTaRS:TRA2A
            EMBL:AC023105 EMBL:AK300565 EMBL:AK300741 IPI:IPI01014274
            SMR:B4DUA9 STRING:B4DUA9 Ensembl:ENST00000538367 Uniprot:B4DUA9
        Length = 181

 Score = 146 (56.5 bits), Expect = 4.9e-10, P = 4.9e-10
 Identities = 38/96 (39%), Positives = 54/96 (56%)

Query:   200 RTGTDMRRRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFV 258
             R  T  R   D N+ + V  LS  T E DL E+F  +G +S V V  DQ+TG SRGF FV
Sbjct:     5 RRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 64

Query:   259 NFVNKEDAQRAINKLNGYGYDNLILRVEWA-TPRTN 293
              F   +D++ A+ + NG   D   +RV+++ T R +
Sbjct:    65 YFERIDDSKEAMERANGMELDGRRIRVDYSITKRAH 100


>ZFIN|ZDB-GENE-030131-5841 [details] [associations]
            symbol:cirbp "cold inducible RNA binding protein"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0009409 "response
            to cold" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-030131-5841 GO:GO:0000166 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104309
            EMBL:BX649404 IPI:IPI00758644 PRIDE:F1R6L3
            Ensembl:ENSDART00000105405 ArrayExpress:F1R6L3 Bgee:F1R6L3
            Uniprot:F1R6L3
        Length = 224

 Score = 155 (59.6 bits), Expect = 5.6e-10, P = 5.6e-10
 Identities = 34/80 (42%), Positives = 49/80 (61%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + +  LS DT E  L E F  +G +++V V  D++T  SRGFGFV F N EDA+ 
Sbjct:    20 SDEGKLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKD 79

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D  ++RV+ A
Sbjct:    80 AMAAMNGKQVDGRMIRVDEA 99


>UNIPROTKB|Q3SZN4 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0070181 "SSU rRNA binding" evidence=IEA] [GO:0048255
            "mRNA stabilization" evidence=IEA] [GO:0045727 "positive regulation
            of translation" evidence=IEA] [GO:0034063 "stress granule assembly"
            evidence=IEA] [GO:0030371 "translation repressor activity"
            evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009411 GO:GO:0000166 GO:GO:0030371 Gene3D:3.30.70.330
            GO:GO:0048255 GO:GO:0003730 GO:GO:0045727 GO:GO:0010494
            GO:GO:0034063 eggNOG:COG0724 GO:GO:0070181 KO:K13195 CTD:1153
            HOGENOM:HOG000276232 OMA:ENRSRGY OrthoDB:EOG4HHP40
            GeneTree:ENSGT00700000104309 EMBL:DAAA02020258 EMBL:BC102773
            IPI:IPI00702406 RefSeq:NP_001029450.1 UniGene:Bt.23273 SMR:Q3SZN4
            Ensembl:ENSBTAT00000004477 GeneID:507120 KEGG:bta:507120
            InParanoid:Q3SZN4 NextBio:20867909 Uniprot:Q3SZN4
        Length = 213

 Score = 152 (58.6 bits), Expect = 5.8e-10, P = 5.8e-10
 Identities = 34/80 (42%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMMAMNGKSVDGRQIRVDQA 82


>UNIPROTKB|Q28IQ9 [details] [associations]
            symbol:cirbp "Cold-inducible RNA-binding protein"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0003729 "mRNA
            binding" evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0007369 "gastrulation" evidence=ISS]
            [GO:0009409 "response to cold" evidence=ISS] [GO:0009790 "embryo
            development" evidence=ISS] [GO:0016477 "cell migration"
            evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
            [GO:0022008 "neurogenesis" evidence=ISS] [GO:0045727 "positive
            regulation of translation" evidence=ISS] [GO:0048255 "mRNA
            stabilization" evidence=ISS] [GO:0048793 "pronephros development"
            evidence=ISS] [GO:0060212 "negative regulation of
            nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISS]
            [GO:0005840 "ribosome" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0005654 GO:GO:0016477
            GO:GO:0022008 GO:GO:0000166 GO:GO:0009409 Gene3D:3.30.70.330
            GO:GO:0019899 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
            GO:GO:0007369 eggNOG:COG0724 GO:GO:0048793 HOVERGEN:HBG107480
            GO:GO:0060212 KO:K13195 CTD:1153 HOGENOM:HOG000276232 EMBL:CR760272
            RefSeq:NP_001017228.1 UniGene:Str.47654 ProteinModelPortal:Q28IQ9
            SMR:Q28IQ9 STRING:Q28IQ9 GeneID:549982 KEGG:xtr:549982
            Xenbase:XB-GENE-492781 Uniprot:Q28IQ9
        Length = 166

 Score = 145 (56.1 bits), Expect = 6.3e-10, P = 6.3e-10
 Identities = 33/84 (39%), Positives = 49/84 (58%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             DE  + V  L+ +T E  L ++F  +G V+ V V  D+++  SRGFGFV F N EDA+ A
Sbjct:     4 DEGKLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDA 63

Query:   270 INKLNGYGYDNLILRVEWATPRTN 293
             +  +NG   D   +RV+ A   +N
Sbjct:    64 MMAMNGKSVDGRQIRVDQAGKSSN 87


>WB|WBGene00011156 [details] [associations]
            symbol:R09B3.3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0009792 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 eggNOG:COG0724 HOGENOM:HOG000276232
            GeneTree:ENSGT00550000074641 EMBL:Z81108 HSSP:P33240 PIR:T24068
            RefSeq:NP_493023.1 ProteinModelPortal:O45713 SMR:O45713
            IntAct:O45713 STRING:O45713 PaxDb:O45713 EnsemblMetazoa:R09B3.3
            GeneID:173071 KEGG:cel:CELE_R09B3.3 UCSC:R09B3.3 CTD:173071
            WormBase:R09B3.3 InParanoid:O45713 OMA:KRVHIPT NextBio:878159
            Uniprot:O45713
        Length = 85

 Score = 143 (55.4 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 34/81 (41%), Positives = 43/81 (53%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             SV V N    T E DL   F   G VS V +  D++TG  RGF FV F  +  AQRA+++
Sbjct:     5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64

Query:   273 LNGYGYDNLILRVEWATPRTN 293
              NG  ++   LRV  A  R N
Sbjct:    65 FNGVDFNGRALRVNLAQNRNN 85


>UNIPROTKB|O45713 [details] [associations]
            symbol:R09B3.3 "Protein R09B3.3" species:6239
            "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0009792 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HOGENOM:HOG000276232 GeneTree:ENSGT00550000074641 EMBL:Z81108
            HSSP:P33240 PIR:T24068 RefSeq:NP_493023.1 ProteinModelPortal:O45713
            SMR:O45713 IntAct:O45713 STRING:O45713 PaxDb:O45713
            EnsemblMetazoa:R09B3.3 GeneID:173071 KEGG:cel:CELE_R09B3.3
            UCSC:R09B3.3 CTD:173071 WormBase:R09B3.3 InParanoid:O45713
            OMA:KRVHIPT NextBio:878159 Uniprot:O45713
        Length = 85

 Score = 143 (55.4 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 34/81 (41%), Positives = 43/81 (53%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             SV V N    T E DL   F   G VS V +  D++TG  RGF FV F  +  AQRA+++
Sbjct:     5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64

Query:   273 LNGYGYDNLILRVEWATPRTN 293
              NG  ++   LRV  A  R N
Sbjct:    65 FNGVDFNGRALRVNLAQNRNN 85


>UNIPROTKB|Q9PTX2 [details] [associations]
            symbol:cirbp "Cold-inducible RNA-binding protein"
            species:8400 "Rana catesbeiana" [GO:0003729 "mRNA binding"
            evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0007369 "gastrulation" evidence=ISS] [GO:0009409
            "response to cold" evidence=ISS] [GO:0009790 "embryo development"
            evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
            [GO:0019899 "enzyme binding" evidence=ISS] [GO:0022008
            "neurogenesis" evidence=ISS] [GO:0042750 "hibernation"
            evidence=IEP] [GO:0045727 "positive regulation of translation"
            evidence=ISS] [GO:0048255 "mRNA stabilization" evidence=ISS]
            [GO:0048793 "pronephros development" evidence=ISS] [GO:0060212
            "negative regulation of nuclear-transcribed mRNA poly(A) tail
            shortening" evidence=ISS] [GO:0005840 "ribosome" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0005654
            GO:GO:0016477 GO:GO:0022008 GO:GO:0000166 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0019899 GO:GO:0048255 GO:GO:0003730
            GO:GO:0045727 GO:GO:0007369 GO:GO:0048793 HOVERGEN:HBG107480
            GO:GO:0060212 HSSP:P09651 EMBL:AB025351 ProteinModelPortal:Q9PTX2
            SMR:Q9PTX2 GO:GO:0042750 Uniprot:Q9PTX2
        Length = 164

 Score = 142 (55.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 35/84 (41%), Positives = 47/84 (55%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             DE  + V  LS DT E  L  +F  +G +  V V  D++T  SRGFGFV F N EDA+ A
Sbjct:     4 DEGKLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDA 63

Query:   270 INKLNGYGYDNLILRVEWATPRTN 293
             +  +NG   D   +RV+ A   +N
Sbjct:    64 MAGMNGKTVDGRQIRVDQAGKSSN 87


>UNIPROTKB|E1C875 [details] [associations]
            symbol:TRA2A "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 EMBL:AADN02000941 EMBL:AADN02000942
            IPI:IPI00681985 ProteinModelPortal:E1C875
            Ensembl:ENSGALT00000031186 Uniprot:E1C875
        Length = 182

 Score = 140 (54.3 bits), Expect = 2.4e-09, P = 2.4e-09
 Identities = 37/96 (38%), Positives = 53/96 (55%)

Query:   200 RTGTDMRRRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFV 258
             R  T  R   D N+ + V  LS  T E DL E+F  +G ++ V V  DQ+TG SRGF FV
Sbjct:     5 RRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLTGVNVVYDQRTGRSRGFAFV 64

Query:   259 NFVNKEDAQRAINKLNGYGYDNLILRVEWA-TPRTN 293
              F   +D++ A+   NG   D   +RV+++ T R +
Sbjct:    65 YFERIDDSKEAMEHANGMELDGRRIRVDYSITKRAH 100


>UNIPROTKB|O93235 [details] [associations]
            symbol:cirbp-a "Cold-inducible RNA-binding protein A"
            species:8355 "Xenopus laevis" [GO:0003729 "mRNA binding"
            evidence=IDA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0007369 "gastrulation" evidence=IMP] [GO:0009409
            "response to cold" evidence=IEP] [GO:0009411 "response to UV"
            evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISS] [GO:0016477
            "cell migration" evidence=IMP] [GO:0017148 "negative regulation of
            translation" evidence=ISS] [GO:0019899 "enzyme binding"
            evidence=ISS] [GO:0022008 "neurogenesis" evidence=IMP] [GO:0030371
            "translation repressor activity" evidence=ISS] [GO:0034063 "stress
            granule assembly" evidence=ISS] [GO:0045727 "positive regulation of
            translation" evidence=ISS] [GO:0048255 "mRNA stabilization"
            evidence=ISS] [GO:0048793 "pronephros development"
            evidence=IEP;IMP] [GO:0060212 "negative regulation of
            nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISS]
            [GO:0070181 "SSU rRNA binding" evidence=ISS] [GO:0072004 "kidney
            field specification" evidence=IMP] [GO:0005840 "ribosome"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0009411
            GO:GO:0005654 GO:GO:0016477 GO:GO:0022008 GO:GO:0000166
            GO:GO:0030371 GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0019899
            GO:GO:0048255 GO:GO:0003730 GO:GO:0045727 GO:GO:0007369
            GO:GO:0010494 GO:GO:0034063 GO:GO:0048793 EMBL:AB007597
            EMBL:AF278702 EMBL:BC041204 RefSeq:NP_001080069.1 UniGene:Xl.4515
            ProteinModelPortal:O93235 SMR:O93235 GeneID:379761 KEGG:xla:379761
            CTD:379761 Xenbase:XB-GENE-6256647 HOVERGEN:HBG107480 GO:GO:0070181
            GO:GO:0072004 GO:GO:0060212 Uniprot:O93235
        Length = 166

 Score = 140 (54.3 bits), Expect = 2.4e-09, P = 2.4e-09
 Identities = 31/80 (38%), Positives = 47/80 (58%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + +  L+ +T E  L + F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     2 SDEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKD 61

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    62 AMMAMNGKSVDGRQIRVDQA 81


>TAIR|locus:2087457 [details] [associations]
            symbol:AT3G14100 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=ISS] [GO:0005829 "cytosol" evidence=RCA] [GO:0006007
            "glucose catabolic process" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002686 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AP000600 HSSP:P33240 KO:K13201 OMA:WAVEPGQ EMBL:AY139775
            EMBL:BT004540 IPI:IPI00517194 RefSeq:NP_188026.1 UniGene:At.22594
            UniGene:At.70203 ProteinModelPortal:Q9LJH8 SMR:Q9LJH8 IntAct:Q9LJH8
            STRING:Q9LJH8 PRIDE:Q9LJH8 EnsemblPlants:AT3G14100.1 GeneID:820626
            KEGG:ath:AT3G14100 TAIR:At3g14100 InParanoid:Q9LJH8
            PhylomeDB:Q9LJH8 ProtClustDB:CLSN2682164 Genevestigator:Q9LJH8
            Uniprot:Q9LJH8
        Length = 427

 Score = 160 (61.4 bits), Expect = 2.4e-09, P = 2.4e-09
 Identities = 37/86 (43%), Positives = 52/86 (60%)

Query:   207 RRNDENS---VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNK 263
             +R D +S   + V +LS +  +  L + F  F + S   V  DQKTG SRGFGFV+F N+
Sbjct:   136 QREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQ 195

Query:   264 EDAQRAINKLNGYGYDNLILRVEWAT 289
             +DAQ AIN++NG    +  +R  WAT
Sbjct:   196 QDAQTAINEMNGKWLSSRQIRCNWAT 221


>UNIPROTKB|K7ELT6 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000590347 Ensembl:ENST00000591055
            Uniprot:K7ELT6
        Length = 135

 Score = 139 (54.0 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 30/67 (44%), Positives = 42/67 (62%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNG 275
             A+  +NG
Sbjct:    63 AMMAMNG 69


>UNIPROTKB|K7ELV6 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000588344 Uniprot:K7ELV6
        Length = 70

 Score = 139 (54.0 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 30/67 (44%), Positives = 42/67 (62%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNG 275
             A+  +NG
Sbjct:    63 AMMAMNG 69


>UNIPROTKB|I3L5X7 [details] [associations]
            symbol:RBM3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 CTD:5935 KO:K13186 OMA:SDAMRAM
            EMBL:FP325173 RefSeq:NP_001230348.1 UniGene:Ssc.3311
            Ensembl:ENSSSCT00000030983 GeneID:100627807 KEGG:ssc:100627807
            Uniprot:I3L5X7
        Length = 156

 Score = 137 (53.3 bits), Expect = 5.2e-09, P = 5.2e-09
 Identities = 31/80 (38%), Positives = 45/80 (56%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             ++E  + V  L+ +T E  L + F  FG +S V V  D++T  SRGFGF+ F N E A  
Sbjct:     3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASN 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMRAMNGESLDGRQIRVDHA 82


>UNIPROTKB|B4E2X2 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC004221 HOVERGEN:HBG107480 EMBL:AC004258 UniGene:Hs.618145
            UniGene:Hs.634522 HGNC:HGNC:1982 HOGENOM:HOG000276232
            OrthoDB:EOG4HHP40 ChiTaRS:CIRBP EMBL:AK304470 IPI:IPI00909097
            SMR:B4E2X2 STRING:B4E2X2 Ensembl:ENST00000413636 UCSC:uc010xgl.1
            Uniprot:B4E2X2
        Length = 263

 Score = 152 (58.6 bits), Expect = 5.4e-09, P = 5.4e-09
 Identities = 34/80 (42%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMMAMNGKSVDGRQIRVDQA 82


>FB|FBgn0086675 [details] [associations]
            symbol:fne "found in neurons" species:7227 "Drosophila
            melanogaster" [GO:0003729 "mRNA binding" evidence=ISS;NAS]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0051252 "regulation of
            RNA metabolic process" evidence=IMP] [GO:0008266 "poly(U) RNA
            binding" evidence=IDA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0008049 "male courtship behavior" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0008266 GO:GO:0000166
            EMBL:AE014298 GO:GO:0003729 Gene3D:3.30.70.330 eggNOG:COG0724
            TIGRFAMs:TIGR01661 GeneTree:ENSGT00560000077064 KO:K13208
            OMA:SNSRNCP HSSP:Q60900 GO:GO:0051252 EMBL:AF239667 EMBL:BT120384
            RefSeq:NP_001096965.1 RefSeq:NP_001245646.1 RefSeq:NP_001245648.1
            RefSeq:NP_001245649.1 RefSeq:NP_572842.1 UniGene:Dm.3314 SMR:Q9VYI0
            IntAct:Q9VYI0 MINT:MINT-1646975 STRING:Q9VYI0
            EnsemblMetazoa:FBtr0073712 EnsemblMetazoa:FBtr0113493
            EnsemblMetazoa:FBtr0306738 EnsemblMetazoa:FBtr0308694
            EnsemblMetazoa:FBtr0308695 EnsemblMetazoa:FBtr0333319
            EnsemblMetazoa:FBtr0333320 GeneID:32245 KEGG:dme:Dmel_CG4396
            UCSC:CG4396-RA CTD:32245 FlyBase:FBgn0086675 InParanoid:Q9VYI0
            OrthoDB:EOG44B8HT GenomeRNAi:32245 NextBio:777561 Uniprot:Q9VYI0
        Length = 356

 Score = 155 (59.6 bits), Expect = 6.3e-09, P = 6.3e-09
 Identities = 35/77 (45%), Positives = 46/77 (59%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL+ +T E  L +LF PFGAV  V V  D +T   +GFGFV   N ++A  AI  LNG
Sbjct:   277 VYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNG 336

Query:   276 YGYDNLILRVEWATPRT 292
             Y   N +L+V + T +T
Sbjct:   337 YTLGNRVLQVSFKTNKT 353

 Score = 117 (46.2 bits), Expect = 0.00018, P = 0.00018
 Identities = 22/60 (36%), Positives = 37/60 (61%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V+ L ++  +PDL  +F  FG +    +  D  +G+S+G GF+ F  + +A+RAI +LNG
Sbjct:   134 VSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNG 193

 Score = 112 (44.5 bits), Expect = 0.00068, P = 0.00068
 Identities = 20/41 (48%), Positives = 29/41 (70%)

Query:   250 GISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
             G S G+GFVN+V  EDA++A+N LNG    N +++V +A P
Sbjct:    82 GQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARP 122


>UNIPROTKB|F6RBQ9 [details] [associations]
            symbol:F6RBQ9 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043023 "ribosomal large subunit binding" evidence=IEA]
            [GO:0035196 "production of miRNAs involved in gene silencing by
            miRNA" evidence=IEA] [GO:0009409 "response to cold" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 GO:GO:0006412
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 GO:GO:0035196 GO:GO:0043023
            OMA:SDAMRAM EMBL:DAAA02073061 IPI:IPI00691523
            Ensembl:ENSBTAT00000024034 Uniprot:F6RBQ9
        Length = 160

 Score = 136 (52.9 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 31/80 (38%), Positives = 45/80 (56%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             ++E  + V  L+ +T E  L + F  FG +S V V  D++T  SRGFGF+ F N E A  
Sbjct:     3 SEEGKLFVGGLNFNTDERALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASN 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMRAMNGESLDGRQIRVDHA 82


>UNIPROTKB|E2R771 [details] [associations]
            symbol:RBM3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 CTD:5935 KO:K13186 OMA:SDAMRAM
            EMBL:AAEX03026334 RefSeq:XP_863171.1 ProteinModelPortal:E2R771
            Ensembl:ENSCAFT00000024556 GeneID:609457 KEGG:cfa:609457
            Uniprot:E2R771
        Length = 162

 Score = 136 (52.9 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 31/80 (38%), Positives = 46/80 (57%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             ++E  + V  L+ +T E  L + FR FG +S V V  D++T  SRGFGF+ F + E A  
Sbjct:     3 SEEGKLFVGGLNFNTDEQALEDHFRSFGPISEVVVVKDRETQRSRGFGFITFTDPEHASD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMRAMNGESLDGRQIRVDHA 82


>FB|FBgn0260400 [details] [associations]
            symbol:elav "embryonic lethal abnormal vision" species:7227
            "Drosophila melanogaster" [GO:0005634 "nucleus" evidence=IDA;TAS]
            [GO:0015030 "Cajal body" evidence=IDA] [GO:0007417 "central nervous
            system development" evidence=IMP] [GO:0016070 "RNA metabolic
            process" evidence=NAS] [GO:0003729 "mRNA binding" evidence=ISS;NAS]
            [GO:0007399 "nervous system development" evidence=NAS] [GO:0008266
            "poly(U) RNA binding" evidence=IDA] [GO:0031441 "negative
            regulation of mRNA 3'-end processing" evidence=IDA] [GO:0003723
            "RNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0008266 GO:GO:0000166
            EMBL:AE014298 GO:GO:0003729 Gene3D:3.30.70.330 EMBL:AL022139
            GO:GO:0007417 GO:GO:0009790 GO:GO:0007281 GO:GO:0015030
            GO:GO:0000900 GO:GO:0031441 GO:GO:0007319 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 KO:K13208 EMBL:M21152 EMBL:AY051822
            PIR:A33130 RefSeq:NP_001014713.1 RefSeq:NP_001138142.1
            RefSeq:NP_001245447.1 RefSeq:NP_525033.1 UniGene:Dm.4473
            ProteinModelPortal:P16914 SMR:P16914 DIP:DIP-23700N IntAct:P16914
            MINT:MINT-1597597 STRING:P16914 PaxDb:P16914 PRIDE:P16914
            EnsemblMetazoa:FBtr0070091 EnsemblMetazoa:FBtr0307173 GeneID:31000
            KEGG:dme:Dmel_CG4262 CTD:31000 FlyBase:FBgn0260400 eggNOG:NOG256997
            InParanoid:Q7K7L9 OMA:DIGESKT PhylomeDB:P16914 GenomeRNAi:31000
            NextBio:771397 Bgee:P16914 GermOnline:CG4262 Uniprot:P16914
        Length = 483

 Score = 157 (60.3 bits), Expect = 6.9e-09, P = 6.9e-09
 Identities = 36/100 (36%), Positives = 52/100 (52%)

Query:   190 VPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKT 249
             +P G+ A A    T          + + NL+ +T E  L +LF PFGAV  V +  D  T
Sbjct:   380 LPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTT 439

Query:   250 GISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWAT 289
                +G+GFV+  N ++A  AI  LNGY   N +L+V + T
Sbjct:   440 NQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKT 479


>UNIPROTKB|D6W5Y5 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:CH471139 EMBL:AC004221 EMBL:AC004258 IPI:IPI00641579
            UniGene:Hs.618145 UniGene:Hs.634522 HGNC:HGNC:1982
            HOGENOM:HOG000276232 ChiTaRS:CIRBP ProteinModelPortal:D6W5Y5
            PRIDE:D6W5Y5 Ensembl:ENST00000587323 Ensembl:ENST00000587896
            Ensembl:ENST00000588230 Ensembl:ENST00000589710 ArrayExpress:D6W5Y5
            Bgee:D6W5Y5 Uniprot:D6W5Y5
        Length = 297

 Score = 152 (58.6 bits), Expect = 8.7e-09, P = 8.7e-09
 Identities = 34/80 (42%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +DE  + V  LS DT E  L ++F  +G +S V V  D++T  SRGFGFV F N +DA+ 
Sbjct:     3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMMAMNGKSVDGRQIRVDQA 82


>MGI|MGI:1099460 [details] [associations]
            symbol:Rbm3 "RNA binding motif protein 3" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006412 "translation"
            evidence=IDA] [GO:0006417 "regulation of translation" evidence=IDA]
            [GO:0006950 "response to stress" evidence=IEA] [GO:0009409
            "response to cold" evidence=IDA] [GO:0015934 "large ribosomal
            subunit" evidence=ISO] [GO:0030425 "dendrite" evidence=ISO]
            [GO:0035196 "production of miRNAs involved in gene silencing by
            miRNA" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
            [GO:0043023 "ribosomal large subunit binding" evidence=IPI]
            [GO:0045727 "positive regulation of translation" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:1099460 GO:GO:0005634 GO:GO:0005737
            GO:GO:0000166 GO:GO:0006412 GO:GO:0030425 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0045727 eggNOG:COG0724
            HOVERGEN:HBG107480 HOGENOM:HOG000276232 OrthoDB:EOG4HHP40
            GO:GO:0035196 GO:GO:0043023 CTD:5935 KO:K13186 EMBL:AB016424
            EMBL:AY052560 EMBL:BC006580 IPI:IPI00130883 RefSeq:NP_001159882.1
            RefSeq:NP_001159883.1 UniGene:Mm.128512 UniGene:Mm.360569
            ProteinModelPortal:O89086 SMR:O89086 IntAct:O89086 STRING:O89086
            PhosphoSite:O89086 REPRODUCTION-2DPAGE:IPI00130883 PaxDb:O89086
            PRIDE:O89086 Ensembl:ENSMUST00000115615 Ensembl:ENSMUST00000115619
            Ensembl:ENSMUST00000115621 GeneID:19652 KEGG:mmu:19652
            NextBio:296916 Bgee:O89086 CleanEx:MM_RBM3 Genevestigator:O89086
            GermOnline:ENSMUSG00000031167 Uniprot:O89086
        Length = 153

 Score = 135 (52.6 bits), Expect = 8.8e-09, P = 8.8e-09
 Identities = 31/80 (38%), Positives = 45/80 (56%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             ++E  + V  L+ +T E  L + F  FG +S V V  D++T  SRGFGF+ F N E A  
Sbjct:     3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMRAMNGESLDGRQIRVDHA 82


>UNIPROTKB|G3V6P6 [details] [associations]
            symbol:Rbm3 "Putative RNA-binding protein 3" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0009409 "response to cold"
            evidence=IEA] [GO:0035196 "production of miRNAs involved in gene
            silencing by miRNA" evidence=IEA] [GO:0043023 "ribosomal large
            subunit binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:620145 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 CTD:5935 KO:K13186 OMA:SDAMRAM
            RefSeq:NP_446148.1 UniGene:Rn.18057 GeneID:114488 KEGG:rno:114488
            NextBio:618509 EMBL:CH474078 Ensembl:ENSRNOT00000007367
            Uniprot:G3V6P6
        Length = 156

 Score = 135 (52.6 bits), Expect = 8.8e-09, P = 8.8e-09
 Identities = 31/80 (38%), Positives = 45/80 (56%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             ++E  + V  L+ +T E  L + F  FG +S V V  D++T  SRGFGF+ F N E A  
Sbjct:     3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMRAMNGESLDGRQIRVDHA 82


>UNIPROTKB|F1NLH0 [details] [associations]
            symbol:ELAVL4 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091
            TIGRFAMs:TIGR01661 GeneTree:ENSGT00560000077064 OMA:SNSRNCP
            EMBL:AADN02012596 IPI:IPI00594347 ProteinModelPortal:F1NLH0
            Ensembl:ENSGALT00000017146 Uniprot:F1NLH0
        Length = 371

 Score = 154 (59.3 bits), Expect = 9.3e-09, P = 9.3e-09
 Identities = 35/78 (44%), Positives = 47/78 (60%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS D+ E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   292 VYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 351

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T +T+
Sbjct:   352 YRLGDRVLQVSFKTNKTH 369

 Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 32/100 (32%), Positives = 52/100 (52%)

Query:   191 PPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTG 250
             P  M+ GA    TD  + N    + V  L ++  + +   LF   G +    +  D+ TG
Sbjct:    37 PSPMQTGA---ATDDSKTN----LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 89

Query:   251 ISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
              S G+GFVN+++ +DA++AIN LNG       ++V +A P
Sbjct:    90 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 129

 Score = 115 (45.5 bits), Expect = 0.00033, P = 0.00033
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   136 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 194

Query:   270 INKLNG 275
             I  LNG
Sbjct:   195 IKGLNG 200


>TAIR|locus:2014340 [details] [associations]
            symbol:UBP1A "oligouridylate-binding protein 1A"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
            evidence=RCA] [GO:0006007 "glucose catabolic process" evidence=RCA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:CP002684 GO:GO:0005886 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 KO:K13201 IPI:IPI00516341
            RefSeq:NP_849806.1 UniGene:At.23098 ProteinModelPortal:F4HV67
            SMR:F4HV67 PRIDE:F4HV67 EnsemblPlants:AT1G54080.2 GeneID:841846
            KEGG:ath:AT1G54080 OMA:YEHRHAT PhylomeDB:F4HV67 Uniprot:F4HV67
        Length = 430

 Score = 155 (59.6 bits), Expect = 9.5e-09, P = 9.5e-09
 Identities = 38/90 (42%), Positives = 53/90 (58%)

Query:   207 RRNDENS---VRVTNLSEDTREPDLLELFRPFGAVSRVY----VAVDQKTGISRGFGFVN 259
             +R D +S   + V +LS +  +  L + F  F + S  Y    V  DQKTG SRGFGFV+
Sbjct:   140 QREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVS 199

Query:   260 FVNKEDAQRAINKLNGYGYDNLILRVEWAT 289
             F N++DAQ AIN++NG    +  +R  WAT
Sbjct:   200 FRNQQDAQTAINEMNGKWVSSRQIRCNWAT 229


>TAIR|locus:2124261 [details] [associations]
            symbol:PAB2 "AT4G34110" species:3702 "Arabidopsis
            thaliana" [GO:0003723 "RNA binding" evidence=ISS] [GO:0003743
            "translation initiation factor activity" evidence=ISS] [GO:0009651
            "response to salt stress" evidence=IEP] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0006486 "protein glycosylation" evidence=RCA] [GO:0006413
            "translational initiation" evidence=ISS] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR002343 InterPro:IPR006515
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658 PRINTS:PR00961
            PROSITE:PS50102 PROSITE:PS51309 SMART:SM00360 SMART:SM00517
            GO:GO:0005829 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0000166
            GO:GO:0009651 Gene3D:3.30.70.330 GO:GO:0003743 EMBL:AL021961
            EMBL:AL161584 eggNOG:COG0724 KO:K13126 Gene3D:1.10.1900.10
            SUPFAM:SSF63570 TIGRFAMs:TIGR01628 HOGENOM:HOG000217922 EMBL:L19418
            EMBL:BT002354 IPI:IPI00532109 PIR:T05425 RefSeq:NP_195137.5
            UniGene:At.25252 ProteinModelPortal:P42731 SMR:P42731 IntAct:P42731
            STRING:P42731 PaxDb:P42731 PRIDE:P42731 ProMEX:P42731
            EnsemblPlants:AT4G34110.1 GeneID:829557 KEGG:ath:AT4G34110
            TAIR:At4g34110 InParanoid:P42731 OMA:FDPIKGR PhylomeDB:P42731
            ProtClustDB:CLSN2714507 Genevestigator:P42731 GermOnline:AT4G34110
            Uniprot:P42731
        Length = 629

 Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 38/95 (40%), Positives = 53/95 (55%)

Query:   186 KGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 245
             K  YV P +R   ER  T    +    +V V NL+E T + DL   F  +G ++   V  
Sbjct:   192 KQVYVGPFLRR-QERDST--ANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMK 248

Query:   246 DQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDN 280
             D + G S+GFGFVNF N +DA RA+  LNG+ +D+
Sbjct:   249 DGE-GKSKGFGFVNFENADDAARAVESLNGHKFDD 282

 Score = 133 (51.9 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 29/69 (42%), Positives = 41/69 (59%)

Query:   207 RRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDA 266
             RR+   ++ + NL E      L + F  FG +    VAVD  +G S+G+GFV + N+E A
Sbjct:   119 RRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDS-SGQSKGYGFVQYANEESA 177

Query:   267 QRAINKLNG 275
             Q+AI KLNG
Sbjct:   178 QKAIEKLNG 186


>GENEDB_PFALCIPARUM|PF14_0057 [details] [associations]
            symbol:PF14_0057 "RNA binding protein,
            putative" species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA
            binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR008111
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR01738 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0006396 EMBL:AE014187
            HSSP:Q9V535 HOGENOM:HOG000183826 KO:K12876 OMA:NIHEEAT
            RefSeq:XP_001348230.1 ProteinModelPortal:Q8IM34 SMR:Q8IM34
            EnsemblProtists:PF14_0057:mRNA GeneID:811639 KEGG:pfa:PF14_0057
            EuPathDB:PlasmoDB:PF3D7_1406000 ProtClustDB:CLSZ2446706
            Uniprot:Q8IM34
        Length = 107

 Score = 134 (52.2 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 23/73 (31%), Positives = 47/73 (64%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             +TN+  + R+  + E+F  FG +  +++ +D++TG  +G+ F+ + N  DA+RAI++++G
Sbjct:    27 ITNIHGEARDDYIKEVFERFGQIKNLHLNIDRRTGFLKGYAFLEYENFVDAKRAIDEMDG 86

Query:   276 YGYDNLILRVEWA 288
                 N  + V+WA
Sbjct:    87 TMLLNQEIHVDWA 99


>UNIPROTKB|P98179 [details] [associations]
            symbol:RBM3 "Putative RNA-binding protein 3" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0009409 "response to cold" evidence=IEA]
            [GO:0035196 "production of miRNAs involved in gene silencing by
            miRNA" evidence=IEA] [GO:0043023 "ribosomal large subunit binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0030425
            "dendrite" evidence=ISS] [GO:0006417 "regulation of translation"
            evidence=ISS] [GO:0045727 "positive regulation of translation"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0015934
            "large ribosomal subunit" evidence=ISS] [GO:0006396 "RNA
            processing" evidence=TAS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000166 GO:GO:0006412 GO:GO:0030425
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006396
            GO:GO:0045727 eggNOG:COG0724 GO:GO:0015934 HOVERGEN:HBG107480
            HOGENOM:HOG000276232 OrthoDB:EOG4HHP40 GO:GO:0035196 EMBL:AF196969
            GO:GO:0043023 EMBL:U28686 EMBL:BC006825 IPI:IPI00024320 PIR:G01859
            RefSeq:NP_006734.1 UniGene:Hs.301404 ProteinModelPortal:P98179
            SMR:P98179 IntAct:P98179 MINT:MINT-5002714 STRING:P98179
            PhosphoSite:P98179 DMDM:1710620 PaxDb:P98179 PeptideAtlas:P98179
            PRIDE:P98179 DNASU:5935 Ensembl:ENST00000376755
            Ensembl:ENST00000376759 GeneID:5935 KEGG:hsa:5935 UCSC:uc004dkf.2
            CTD:5935 GeneCards:GC0XP048432 HGNC:HGNC:9900 HPA:HPA003624
            MIM:300027 neXtProt:NX_P98179 PharmGKB:PA34265 InParanoid:P98179
            KO:K13186 OMA:SDAMRAM PhylomeDB:P98179 ChiTaRS:RBM3 GenomeRNAi:5935
            NextBio:23136 ArrayExpress:P98179 Bgee:P98179 CleanEx:HS_RBM3
            Genevestigator:P98179 GermOnline:ENSG00000102317 Uniprot:P98179
        Length = 157

 Score = 134 (52.2 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 31/80 (38%), Positives = 45/80 (56%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             ++E  + V  L+ +T E  L + F  FG +S V V  D++T  SRGFGF+ F N E A  
Sbjct:     3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASV 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMRAMNGESLDGRQIRVDHA 82


>UNIPROTKB|Q8IM34 [details] [associations]
            symbol:PF14_0057 "RNA binding protein, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0003729 "mRNA
            binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR008111
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR01738 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0006396 EMBL:AE014187
            HSSP:Q9V535 HOGENOM:HOG000183826 KO:K12876 OMA:NIHEEAT
            RefSeq:XP_001348230.1 ProteinModelPortal:Q8IM34 SMR:Q8IM34
            EnsemblProtists:PF14_0057:mRNA GeneID:811639 KEGG:pfa:PF14_0057
            EuPathDB:PlasmoDB:PF3D7_1406000 ProtClustDB:CLSZ2446706
            Uniprot:Q8IM34
        Length = 107

 Score = 134 (52.2 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 23/73 (31%), Positives = 47/73 (64%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             +TN+  + R+  + E+F  FG +  +++ +D++TG  +G+ F+ + N  DA+RAI++++G
Sbjct:    27 ITNIHGEARDDYIKEVFERFGQIKNLHLNIDRRTGFLKGYAFLEYENFVDAKRAIDEMDG 86

Query:   276 YGYDNLILRVEWA 288
                 N  + V+WA
Sbjct:    87 TMLLNQEIHVDWA 99


>ZFIN|ZDB-GENE-990415-246 [details] [associations]
            symbol:elavl4 "ELAV (embryonic lethal, abnormal
            vision, Drosophila)-like 4 (Hu antigen D)" species:7955 "Danio
            rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-990415-246 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 EMBL:CR931780 EMBL:CU467068
            EMBL:CU929301 IPI:IPI00920316 ProteinModelPortal:F1R133
            Ensembl:ENSDART00000134787 ArrayExpress:F1R133 Bgee:F1R133
            Uniprot:F1R133
        Length = 408

 Score = 154 (59.3 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 35/78 (44%), Positives = 47/78 (60%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS D+ E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   329 VYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 388

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T +T+
Sbjct:   389 YRLGDRVLQVSFKTNKTH 406

 Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 27/84 (32%), Positives = 47/84 (55%)

Query:   209 NDENSVR-VTN-LSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDA 266
             ND++    + N L ++  + +   LF   G +    +  D+ TG S G+GFVN+++ +DA
Sbjct:    83 NDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 142

Query:   267 QRAINKLNGYGYDNLILRVEWATP 290
             ++AIN LNG       ++V +A P
Sbjct:   143 EKAINTLNGLRLQTKTIKVSYARP 166


>UNIPROTKB|D4A6U8 [details] [associations]
            symbol:Tia1 "Protein Tia1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1305742 GO:GO:0005634 GO:GO:0005737 GO:GO:0017148 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0042036 GO:GO:0048024
            OrthoDB:EOG4B5P59 IPI:IPI00778030 ProteinModelPortal:D4A6U8
            Ensembl:ENSRNOT00000041366 Uniprot:D4A6U8
        Length = 382

 Score = 153 (58.9 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 34/89 (38%), Positives = 46/89 (51%)

Query:   201 TGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 260
             T    +R  D   V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F
Sbjct:    91 TVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSF 150

Query:   261 VNKEDAQRAINKLNGYGYDNLILRVEWAT 289
              NK DA+ AI ++ G       +R  WAT
Sbjct:   151 FNKWDAENAIQQMGGQWLGGRQIRTNWAT 179


>UNIPROTKB|Q0VBZ6 [details] [associations]
            symbol:TIA1 "TIA1 cytotoxic granule-associated RNA binding
            protein" species:9913 "Bos taurus" [GO:0048024 "regulation of mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0042036 "negative
            regulation of cytokine biosynthetic process" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0010494
            "cytoplasmic stress granule" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0017148
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0042036
            GO:GO:0048024 eggNOG:COG0724 GeneTree:ENSGT00680000099967
            HOGENOM:HOG000206748 KO:K13201 CTD:7072 HOVERGEN:HBG105006
            OrthoDB:EOG4B5P59 OMA:TSAPWMG EMBL:DAAA02031534 EMBL:BC120427
            IPI:IPI00707848 RefSeq:NP_001069577.1 UniGene:Bt.91654 SMR:Q0VBZ6
            Ensembl:ENSBTAT00000025528 GeneID:538533 KEGG:bta:538533
            InParanoid:Q0VBZ6 NextBio:20877426 Uniprot:Q0VBZ6
        Length = 384

 Score = 153 (58.9 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 34/89 (38%), Positives = 46/89 (51%)

Query:   201 TGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 260
             T    +R  D   V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F
Sbjct:    95 TVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSF 154

Query:   261 VNKEDAQRAINKLNGYGYDNLILRVEWAT 289
              NK DA+ AI ++ G       +R  WAT
Sbjct:   155 FNKWDAENAIQQMGGQWLGGRQIRTNWAT 183


>UNIPROTKB|F8W8I6 [details] [associations]
            symbol:TIA1 "Nucleolysin TIA-1 isoform p40" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC016700
            HGNC:HGNC:11802 ChiTaRS:TIA1 IPI:IPI00926358
            ProteinModelPortal:F8W8I6 SMR:F8W8I6 PRIDE:F8W8I6
            Ensembl:ENST00000282574 ArrayExpress:F8W8I6 Bgee:F8W8I6
            Uniprot:F8W8I6
        Length = 385

 Score = 153 (58.9 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 34/89 (38%), Positives = 46/89 (51%)

Query:   201 TGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 260
             T    +R  D   V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F
Sbjct:    95 TVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSF 154

Query:   261 VNKEDAQRAINKLNGYGYDNLILRVEWAT 289
              NK DA+ AI ++ G       +R  WAT
Sbjct:   155 FNKWDAENAIQQMGGQWLGGRQIRTNWAT 183


>UNIPROTKB|P31483 [details] [associations]
            symbol:TIA1 "Nucleolysin TIA-1 isoform p40" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IEA] [GO:0010494
            "cytoplasmic stress granule" evidence=IEA] [GO:0017091 "AU-rich
            element binding" evidence=IEA] [GO:0017148 "negative regulation of
            translation" evidence=IEA] [GO:0042036 "negative regulation of
            cytokine biosynthetic process" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0048024 "regulation of mRNA splicing, via spliceosome"
            evidence=IDA] [GO:0006917 "induction of apoptosis" evidence=TAS]
            [GO:0008143 "poly(A) RNA binding" evidence=TAS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006915 EMBL:CH471053
            GO:GO:0006917 GO:GO:0017148 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 GO:GO:0042036 GO:GO:0048024 eggNOG:COG0724
            GO:GO:0008143 HOGENOM:HOG000206748 KO:K13201 EMBL:M77142
            EMBL:S70114 EMBL:AC016700 IPI:IPI00291398 IPI:IPI00333996
            PIR:A39293 RefSeq:NP_071320.2 RefSeq:NP_071505.2 UniGene:Hs.413123
            PDB:3BS9 PDBsum:3BS9 ProteinModelPortal:P31483 SMR:P31483
            IntAct:P31483 STRING:P31483 PhosphoSite:P31483 DMDM:206729905
            PaxDb:P31483 PRIDE:P31483 Ensembl:ENST00000415783
            Ensembl:ENST00000433529 GeneID:7072 KEGG:hsa:7072 UCSC:uc002sgj.4
            UCSC:uc002sgk.4 CTD:7072 GeneCards:GC02M070437 HGNC:HGNC:11802
            MIM:603518 neXtProt:NX_P31483 PharmGKB:PA36511 HOVERGEN:HBG105006
            InParanoid:P31483 OrthoDB:EOG4B5P59 PhylomeDB:P31483 ChiTaRS:TIA1
            EvolutionaryTrace:P31483 GenomeRNAi:7072 NextBio:27655
            ArrayExpress:P31483 Bgee:P31483 CleanEx:HS_TIA1
            Genevestigator:P31483 GermOnline:ENSG00000116001 Uniprot:P31483
        Length = 386

 Score = 153 (58.9 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 34/89 (38%), Positives = 46/89 (51%)

Query:   201 TGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 260
             T    +R  D   V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F
Sbjct:    95 TVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSF 154

Query:   261 VNKEDAQRAINKLNGYGYDNLILRVEWAT 289
              NK DA+ AI ++ G       +R  WAT
Sbjct:   155 FNKWDAENAIQQMGGQWLGGRQIRTNWAT 183


>MGI|MGI:107914 [details] [associations]
            symbol:Tia1 "cytotoxic granule-associated RNA binding protein
            1" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006915
            "apoptotic process" evidence=IEA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IDA] [GO:0017091 "AU-rich element binding"
            evidence=IDA] [GO:0017148 "negative regulation of translation"
            evidence=IMP] [GO:0042036 "negative regulation of cytokine
            biosynthetic process" evidence=IMP] [GO:0048024 "regulation of mRNA
            splicing, via spliceosome" evidence=ISO] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            MGI:MGI:107914 GO:GO:0005634 GO:GO:0006915 GO:GO:0017148
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0042036
            GO:GO:0048024 GO:GO:0010494 eggNOG:COG0724 HOGENOM:HOG000206748
            KO:K13201 CTD:7072 HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 EMBL:U00689
            EMBL:U55862 IPI:IPI00132462 PIR:S72435 RefSeq:NP_035715.1
            UniGene:Mm.333219 PDB:2DGO PDB:2RNE PDBsum:2DGO PDBsum:2RNE
            ProteinModelPortal:P52912 SMR:P52912 STRING:P52912
            PhosphoSite:P52912 PaxDb:P52912 PRIDE:P52912
            Ensembl:ENSMUST00000095753 GeneID:21841 KEGG:mmu:21841
            InParanoid:P52912 OMA:TSAPWMG EvolutionaryTrace:P52912
            NextBio:301304 Bgee:P52912 Genevestigator:P52912
            GermOnline:ENSMUSG00000071337 Uniprot:P52912
        Length = 386

 Score = 153 (58.9 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 34/89 (38%), Positives = 46/89 (51%)

Query:   201 TGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 260
             T    +R  D   V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F
Sbjct:    95 TVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSF 154

Query:   261 VNKEDAQRAINKLNGYGYDNLILRVEWAT 289
              NK DA+ AI ++ G       +R  WAT
Sbjct:   155 FNKWDAENAIQQMGGQWLGGRQIRTNWAT 183


>FB|FBgn0010263 [details] [associations]
            symbol:Rbp9 "RNA-binding protein 9" species:7227 "Drosophila
            melanogaster" [GO:0003729 "mRNA binding" evidence=ISS;NAS]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=TAS] [GO:0007293
            "germarium-derived egg chamber formation" evidence=TAS] [GO:0005634
            "nucleus" evidence=TAS] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0048477
            "oogenesis" evidence=IMP] [GO:0036093 "germ cell proliferation"
            evidence=IMP] [GO:0060856 "establishment of blood-brain barrier"
            evidence=IMP] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0007293 TIGRFAMs:TIGR01661
            HSSP:P26378 GO:GO:0060856 FlyBase:FBgn0010263 EMBL:S55886
            ProteinModelPortal:Q26293 SMR:Q26293 STRING:Q26293 PRIDE:Q26293
            InParanoid:Q26293 ArrayExpress:Q26293 Bgee:Q26293 Uniprot:Q26293
        Length = 444

 Score = 154 (59.3 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 35/74 (47%), Positives = 44/74 (59%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL+ DT E  L +LF PFGAV  V V  D ++   +GFGFV   N E+A  AI  LNG
Sbjct:   365 VYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSLNG 424

Query:   276 YGYDNLILRVEWAT 289
             Y   N +L+V + T
Sbjct:   425 YTLGNRVLQVSFKT 438

 Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 30/75 (40%), Positives = 43/75 (57%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V  L +   + ++  LF  FG V    +  D+ TG S G+GFVN+V +EDA++AIN LNG
Sbjct:   114 VNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINALNG 173

Query:   276 YGYDNLILRVEWATP 290
                 N  ++V  A P
Sbjct:   174 LRLQNKTIKVSIARP 188


>UNIPROTKB|F1PWU8 [details] [associations]
            symbol:TIA1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00680000099967 OMA:TSAPWMG EMBL:AAEX03007635
            EMBL:AAEX03007634 Ensembl:ENSCAFT00000005363 Uniprot:F1PWU8
        Length = 393

 Score = 153 (58.9 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 34/89 (38%), Positives = 46/89 (51%)

Query:   201 TGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 260
             T    +R  D   V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F
Sbjct:    95 TVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSF 154

Query:   261 VNKEDAQRAINKLNGYGYDNLILRVEWAT 289
              NK DA+ AI ++ G       +R  WAT
Sbjct:   155 FNKWDAENAIQQMGGQWLGGRQIRTNWAT 183


>ZFIN|ZDB-GENE-030131-2167 [details] [associations]
            symbol:tia1l "cytotoxic granule-associated RNA
            binding protein 1, like" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-030131-2167 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 HSSP:P11940 GeneTree:ENSGT00680000099967 KO:K13201
            OMA:PAYNTTV HOVERGEN:HBG105006 EMBL:BX088551 EMBL:BC045485
            EMBL:BC066734 IPI:IPI00499030 RefSeq:NP_956476.1 UniGene:Dr.5585
            SMR:Q7ZVM6 Ensembl:ENSDART00000003957 GeneID:323447 KEGG:dre:323447
            CTD:323447 InParanoid:Q7ZVM6 NextBio:20808253 Uniprot:Q7ZVM6
        Length = 342

 Score = 150 (57.9 bits), Expect = 2.3e-08, P = 2.3e-08
 Identities = 31/76 (40%), Positives = 44/76 (57%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +    D+   F PFG +S   V  D  TG S+G+GF++F+NK DA+ AI ++
Sbjct:    99 VFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAESAIQQM 158

Query:   274 NGYGYDNLILRVEWAT 289
             NG       +R  WAT
Sbjct:   159 NGQWLGGRQIRTNWAT 174


>RGD|620145 [details] [associations]
            symbol:Rbm3 "RNA binding motif (RNP1, RRM) protein 3"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006412 "translation"
            evidence=ISO] [GO:0006417 "regulation of translation"
            evidence=ISO;ISS] [GO:0006950 "response to stress" evidence=IEA]
            [GO:0009409 "response to cold" evidence=ISO] [GO:0015934 "large
            ribosomal subunit" evidence=IDA] [GO:0030425 "dendrite"
            evidence=IDA] [GO:0035196 "production of miRNAs involved in gene
            silencing by miRNA" evidence=ISO] [GO:0043023 "ribosomal large
            subunit binding" evidence=ISO] [GO:0045727 "positive regulation of
            translation" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:620145 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000166 GO:GO:0006412 GO:GO:0030425
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0045727
            eggNOG:COG0724 HOVERGEN:HBG107480 HSSP:P09651 HOGENOM:HOG000276232
            OrthoDB:EOG4HHP40 GO:GO:0035196 GO:GO:0043023 CTD:5935 KO:K13186
            EMBL:FM093406 EMBL:AF355190 IPI:IPI00367437 IPI:IPI00955177
            RefSeq:NP_446148.1 UniGene:Rn.18057 ProteinModelPortal:Q925G0
            MINT:MINT-4611770 STRING:Q925G0 PRIDE:Q925G0 GeneID:114488
            KEGG:rno:114488 UCSC:RGD:620145 InParanoid:Q925G0 NextBio:618509
            Genevestigator:Q925G0 Uniprot:Q925G0
        Length = 155

 Score = 131 (51.2 bits), Expect = 2.5e-08, P = 2.5e-08
 Identities = 30/80 (37%), Positives = 44/80 (55%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             ++E  + V  L+ +T E  L + F  FG +S V V  D++T  SRGFGF+ F N E A  
Sbjct:     3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
              +  +NG   D   +RV+ A
Sbjct:    63 VMRAMNGESLDGRQIRVDHA 82


>UNIPROTKB|D3K5N7 [details] [associations]
            symbol:ELAVL1 "ELAV (Embryonic lethal, abnormal vision,
            Drosophila)-like 1" species:9823 "Sus scrofa" [GO:0070935
            "3'-UTR-mediated mRNA stabilization" evidence=IEA] [GO:0045727
            "positive regulation of translation" evidence=IEA] [GO:0019901
            "protein kinase binding" evidence=IEA] [GO:0017091 "AU-rich element
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0045727
            GO:GO:0070935 CTD:1994 KO:K13088 OrthoDB:EOG4Z8XWZ
            TIGRFAMs:TIGR01661 GeneTree:ENSGT00560000077064 OMA:RFGGPLH
            EMBL:CU929699 EMBL:GU373715 RefSeq:NP_001182263.1 UniGene:Ssc.4516
            ProteinModelPortal:D3K5N7 Ensembl:ENSSSCT00000014844
            GeneID:100337681 KEGG:ssc:100337681 Uniprot:D3K5N7
        Length = 326

 Score = 149 (57.5 bits), Expect = 2.7e-08, P = 2.7e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             + NL +D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N E+A  AI  LNG
Sbjct:   248 IYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEASMAIASLNG 307

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + IL+V + T +++
Sbjct:   308 YRLGDKILQVSFKTNKSH 325

 Score = 130 (50.8 bits), Expect = 4.8e-06, P = 4.8e-06
 Identities = 29/87 (33%), Positives = 46/87 (52%)

Query:   204 DMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNK 263
             D R      ++ V  L ++  + +L  LF   G +    +  D+  G S G+GFVN+V  
Sbjct:    12 DCRDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEIESAKLIRDKVAGHSLGYGFVNYVTA 71

Query:   264 EDAQRAINKLNGYGYDNLILRVEWATP 290
             +DA+RAIN LNG    +  ++V +A P
Sbjct:    72 KDAERAINTLNGLRLQSKTIKVSYARP 98

 Score = 122 (48.0 bits), Expect = 4.1e-05, P = 4.1e-05
 Identities = 24/67 (35%), Positives = 38/67 (56%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + ++ L     + D+ ++F PFG +    V VDQ TG+SRG  F+ F  + +A+ A
Sbjct:   105 DAN-LYISGLPRTMTQKDVEDMFSPFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163

Query:   270 INKLNGY 276
             I   NG+
Sbjct:   164 ITSFNGH 170


>ZFIN|ZDB-GENE-040426-1391 [details] [associations]
            symbol:tra2a "transformer-2 alpha" species:7955
            "Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-040426-1391 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 eggNOG:COG0724 HOGENOM:HOG000276232
            GeneTree:ENSGT00700000104309 HSSP:P52298 CTD:29896
            HOVERGEN:HBG102125 KO:K12897 OMA:DRYEEYD OrthoDB:EOG4BVRW2
            EMBL:BX469899 EMBL:BC054632 IPI:IPI00510581 RefSeq:NP_956710.1
            UniGene:Dr.75585 SMR:Q7T2A0 STRING:Q7T2A0
            Ensembl:ENSDART00000008595 GeneID:393388 KEGG:dre:393388
            InParanoid:Q7T2A0 NextBio:20814435 Uniprot:Q7T2A0
        Length = 297

 Score = 148 (57.2 bits), Expect = 2.7e-08, P = 2.7e-08
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query:   204 DMRRRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVN 262
             D R   D N+ + V  LS  T E DL E+F  +G+++ V V  DQ+TG SRGF FV F +
Sbjct:   126 DARANPDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEH 185

Query:   263 KEDAQRAINKLNGYGYDNLILRVEWA 288
              +DA+ A+ + NG   D   +RV+++
Sbjct:   186 IDDAKEAMERANGMELDGRRIRVDYS 211


>UNIPROTKB|D4AAT0 [details] [associations]
            symbol:Elavl4 "ELAV-like protein 4" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            TIGRFAMs:TIGR01661 IPI:IPI00392493 ProteinModelPortal:D4AAT0
            Ensembl:ENSRNOT00000035262 ArrayExpress:D4AAT0 Uniprot:D4AAT0
        Length = 351

 Score = 149 (57.5 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS D+ E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   272 VYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 331

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T + +
Sbjct:   332 YRLGDRVLQVSFKTNKAH 349

 Score = 128 (50.1 bits), Expect = 9.5e-06, P = 9.5e-06
 Identities = 32/100 (32%), Positives = 52/100 (52%)

Query:   191 PPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTG 250
             P  M+ GA    TD  + N    + V  L ++  + +   LF   G +    +  D+ TG
Sbjct:    30 PSPMQTGA---ATDDSKTN----LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 82

Query:   251 ISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
              S G+GFVN+++ +DA++AIN LNG       ++V +A P
Sbjct:    83 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 122

 Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   129 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 187

Query:   270 INKLNG 275
             I  LNG
Sbjct:   188 IKGLNG 193


>UNIPROTKB|Q3ZCE2 [details] [associations]
            symbol:ELAVL1 "ELAV (Embryonic lethal, abnormal vision,
            Drosophila)-like 1 (Hu antigen R)" species:9913 "Bos taurus"
            [GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=IEA]
            [GO:0045727 "positive regulation of translation" evidence=IEA]
            [GO:0019901 "protein kinase binding" evidence=IEA] [GO:0017091
            "AU-rich element binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 GO:GO:0045727 eggNOG:COG0724 GO:GO:0070935
            HOVERGEN:HBG002295 CTD:1994 HOGENOM:HOG000231162 KO:K13088
            OrthoDB:EOG4Z8XWZ TIGRFAMs:TIGR01661 GeneTree:ENSGT00560000077064
            OMA:RFGGPLH EMBL:DAAA02019508 EMBL:DAAA02019509 EMBL:BC102495
            IPI:IPI00703347 RefSeq:NP_001069922.1 UniGene:Bt.49576 SMR:Q3ZCE2
            STRING:Q3ZCE2 Ensembl:ENSBTAT00000000805 GeneID:617316
            KEGG:bta:617316 InParanoid:Q3ZCE2 NextBio:20900599 Uniprot:Q3ZCE2
        Length = 326

 Score = 148 (57.2 bits), Expect = 3.6e-08, P = 3.6e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             + NL +D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N E+A  AI  LNG
Sbjct:   248 IYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + IL+V + T +++
Sbjct:   308 YRLGDKILQVSFKTNKSH 325

 Score = 131 (51.2 bits), Expect = 3.7e-06, P = 3.7e-06
 Identities = 30/87 (34%), Positives = 46/87 (52%)

Query:   204 DMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNK 263
             D R      ++ V  L ++  + +L  LF   G V    +  D+  G S G+GFVN+V  
Sbjct:    12 DCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 71

Query:   264 EDAQRAINKLNGYGYDNLILRVEWATP 290
             +DA+RAIN LNG    +  ++V +A P
Sbjct:    72 KDAERAINTLNGLRLQSKTIKVSYARP 98

 Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
 Identities = 23/67 (34%), Positives = 38/67 (56%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + ++ L  +  + D+ ++F  FG +    V VDQ TG+SRG  F+ F  + +A+ A
Sbjct:   105 DAN-LYISGLPRNMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163

Query:   270 INKLNGY 276
             I   NG+
Sbjct:   164 ITSFNGH 170


>UNIPROTKB|F1N9I5 [details] [associations]
            symbol:ELAVL1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0017091 "AU-rich element binding" evidence=IEA]
            [GO:0019901 "protein kinase binding" evidence=IEA] [GO:0045727
            "positive regulation of translation" evidence=IEA] [GO:0070935
            "3'-UTR-mediated mRNA stabilization" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0045727 GO:GO:0070935
            TIGRFAMs:TIGR01661 GeneTree:ENSGT00560000077064 OMA:RFGGPLH
            EMBL:AADN02063542 IPI:IPI00590347 ProteinModelPortal:F1N9I5
            Ensembl:ENSGALT00000001029 Uniprot:F1N9I5
        Length = 326

 Score = 148 (57.2 bits), Expect = 3.6e-08, P = 3.6e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             + NL +D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N E+A  AI  LNG
Sbjct:   248 IYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + IL+V + T +++
Sbjct:   308 YRLGDKILQVSFKTNKSH 325

 Score = 131 (51.2 bits), Expect = 3.7e-06, P = 3.7e-06
 Identities = 30/87 (34%), Positives = 46/87 (52%)

Query:   204 DMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNK 263
             D R      ++ V  L ++  + +L  LF   G V    +  D+  G S G+GFVN+V  
Sbjct:    12 DCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 71

Query:   264 EDAQRAINKLNGYGYDNLILRVEWATP 290
             +DA+RAIN LNG    +  ++V +A P
Sbjct:    72 KDAERAINTLNGLRLQSKTIKVSYARP 98

 Score = 114 (45.2 bits), Expect = 0.00034, P = 0.00034
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + ++ L     + D+ ++F  FG +    V VDQ TG+SRG  F+ F  + +A+ A
Sbjct:   105 DAN-LYISGLPRSMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163

Query:   270 INKLNGY 276
             I   NG+
Sbjct:   164 ITNFNGH 170


>UNIPROTKB|Q15717 [details] [associations]
            symbol:ELAVL1 "ELAV-like protein 1" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0070935
            "3'-UTR-mediated mRNA stabilization" evidence=IDA;IMP] [GO:0048255
            "mRNA stabilization" evidence=IDA;IMP] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0017091
            "AU-rich element binding" evidence=IDA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0003723 "RNA binding" evidence=IDA]
            [GO:0019901 "protein kinase binding" evidence=IPI] [GO:0035925
            "mRNA 3'-UTR AU-rich region binding" evidence=IDA] [GO:0045727
            "positive regulation of translation" evidence=IDA] [GO:0003729
            "mRNA binding" evidence=TAS] [GO:0007275 "multicellular organismal
            development" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
            evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
            [GO:0016071 "mRNA metabolic process" evidence=TAS]
            Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0007275 GO:GO:0005829 GO:GO:0010467 GO:GO:0016071
            GO:GO:0005654 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
            GO:GO:0017091 EMBL:CH471139 GO:GO:0045727 eggNOG:COG0724
            GO:GO:0070935 HOVERGEN:HBG002295 EMBL:U38175 EMBL:BT009793
            EMBL:BC003376 IPI:IPI00940851 RefSeq:NP_001410.2 UniGene:Hs.184492
            UniGene:Hs.713744 PDB:3HI9 PDB:4ED5 PDB:4EGL PDB:4FXV PDBsum:3HI9
            PDBsum:4ED5 PDBsum:4EGL PDBsum:4FXV ProteinModelPortal:Q15717
            SMR:Q15717 IntAct:Q15717 MINT:MINT-5001300 STRING:Q15717
            PhosphoSite:Q15717 DMDM:20981691 PaxDb:Q15717 PeptideAtlas:Q15717
            PRIDE:Q15717 DNASU:1994 Ensembl:ENST00000407627 GeneID:1994
            KEGG:hsa:1994 UCSC:uc002mjb.3 CTD:1994 GeneCards:GC19M008023
            HGNC:HGNC:3312 HPA:CAB005256 MIM:603466 neXtProt:NX_Q15717
            PharmGKB:PA27740 HOGENOM:HOG000231162 InParanoid:Q15717 KO:K13088
            OrthoDB:EOG4Z8XWZ PhylomeDB:Q15717 BindingDB:Q15717
            ChEMBL:CHEMBL1250379 EvolutionaryTrace:Q15717 GenomeRNAi:1994
            NextBio:8063 ArrayExpress:Q15717 Bgee:Q15717 CleanEx:HS_ELAVL1
            Genevestigator:Q15717 GermOnline:ENSG00000066044 TIGRFAMs:TIGR01661
            Uniprot:Q15717
        Length = 326

 Score = 148 (57.2 bits), Expect = 3.6e-08, P = 3.6e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             + NL +D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N E+A  AI  LNG
Sbjct:   248 IYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + IL+V + T +++
Sbjct:   308 YRLGDKILQVSFKTNKSH 325

 Score = 131 (51.2 bits), Expect = 3.7e-06, P = 3.7e-06
 Identities = 30/87 (34%), Positives = 46/87 (52%)

Query:   204 DMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNK 263
             D R      ++ V  L ++  + +L  LF   G V    +  D+  G S G+GFVN+V  
Sbjct:    12 DCRGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 71

Query:   264 EDAQRAINKLNGYGYDNLILRVEWATP 290
             +DA+RAIN LNG    +  ++V +A P
Sbjct:    72 KDAERAINTLNGLRLQSKTIKVSYARP 98

 Score = 113 (44.8 bits), Expect = 0.00044, P = 0.00044
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + ++ L     + D+ ++F  FG +    V VDQ TG+SRG  F+ F  + +A+ A
Sbjct:   105 DAN-LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163

Query:   270 INKLNGY 276
             I   NG+
Sbjct:   164 ITSFNGH 170


>MGI|MGI:1100851 [details] [associations]
            symbol:Elavl1 "ELAV (embryonic lethal, abnormal vision)-like
            1 (Hu antigen R)" species:10090 "Mus musculus" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=ISO] [GO:0005634
            "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0006417 "regulation of translation" evidence=ISO] [GO:0017091
            "AU-rich element binding" evidence=ISO] [GO:0019901 "protein kinase
            binding" evidence=ISO] [GO:0035925 "mRNA 3'-UTR AU-rich region
            binding" evidence=ISO] [GO:0045727 "positive regulation of
            translation" evidence=ISO;IMP;IDA] [GO:0048255 "mRNA stabilization"
            evidence=ISO;IMP] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
            evidence=ISO] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:1100851 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091
            GO:GO:0045727 EMBL:CH466566 eggNOG:COG0724 GO:GO:0070935
            HOVERGEN:HBG002295 CTD:1994 HOGENOM:HOG000231162 KO:K13088
            OrthoDB:EOG4Z8XWZ TIGRFAMs:TIGR01661 EMBL:U65735 EMBL:AK080365
            EMBL:U17595 IPI:IPI00108271 PIR:I49144 RefSeq:NP_034615.2
            UniGene:Mm.119162 HSSP:P26378 ProteinModelPortal:P70372 SMR:P70372
            DIP:DIP-46480N MINT:MINT-4094207 STRING:P70372 PhosphoSite:P70372
            PaxDb:P70372 PRIDE:P70372 Ensembl:ENSMUST00000098950 GeneID:15568
            KEGG:mmu:15568 GeneTree:ENSGT00560000077064 InParanoid:P70372
            OMA:YANRACA ChiTaRS:ELAVL1 NextBio:288542 Bgee:P70372
            Genevestigator:P70372 GermOnline:ENSMUSG00000040028 Uniprot:P70372
        Length = 326

 Score = 148 (57.2 bits), Expect = 3.6e-08, P = 3.6e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             + NL +D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N E+A  AI  LNG
Sbjct:   248 IYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + IL+V + T +++
Sbjct:   308 YRLGDKILQVSFKTNKSH 325

 Score = 126 (49.4 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 29/87 (33%), Positives = 46/87 (52%)

Query:   204 DMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNK 263
             D R      ++ V  L ++  + +L  LF   G V    +  D+  G S G+GFVN+V  
Sbjct:    12 DCRDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 71

Query:   264 EDAQRAINKLNGYGYDNLILRVEWATP 290
             +DA+RAI+ LNG    +  ++V +A P
Sbjct:    72 KDAERAISTLNGLRLQSKTIKVSYARP 98

 Score = 113 (44.8 bits), Expect = 0.00044, P = 0.00044
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + ++ L     + D+ ++F  FG +    V VDQ TG+SRG  F+ F  + +A+ A
Sbjct:   105 DAN-LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163

Query:   270 INKLNGY 276
             I   NG+
Sbjct:   164 ITSFNGH 170


>RGD|1308649 [details] [associations]
            symbol:Elavl1 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 1 (Hu antigen R)" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISO] [GO:0003730 "mRNA 3'-UTR
            binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006417 "regulation of
            translation" evidence=ISO] [GO:0017091 "AU-rich element binding"
            evidence=ISO] [GO:0019901 "protein kinase binding" evidence=ISO]
            [GO:0035925 "mRNA 3'-UTR AU-rich region binding" evidence=ISO]
            [GO:0045727 "positive regulation of translation" evidence=IEA;ISO]
            [GO:0048255 "mRNA stabilization" evidence=ISO] [GO:0070935
            "3'-UTR-mediated mRNA stabilization" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 RGD:1308649 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003730 eggNOG:COG0724 HOVERGEN:HBG002295 CTD:1994
            HOGENOM:HOG000231162 KO:K13088 OrthoDB:EOG4Z8XWZ TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:RFGGPLH EMBL:CH474084
            EMBL:BC168972 EMBL:AB212679 IPI:IPI00869767 RefSeq:NP_001102318.1
            UniGene:Rn.216517 SMR:B5DF91 STRING:B5DF91
            Ensembl:ENSRNOT00000001415 GeneID:363854 KEGG:rno:363854
            UCSC:RGD:1308649 NextBio:684342 Genevestigator:B5DF91
            Uniprot:B5DF91
        Length = 326

 Score = 148 (57.2 bits), Expect = 3.6e-08, P = 3.6e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             + NL +D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N E+A  AI  LNG
Sbjct:   248 IYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + IL+V + T +++
Sbjct:   308 YRLGDKILQVSFKTNKSH 325

 Score = 126 (49.4 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 29/87 (33%), Positives = 46/87 (52%)

Query:   204 DMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNK 263
             D R      ++ V  L ++  + +L  LF   G V    +  D+  G S G+GFVN+V  
Sbjct:    12 DCRDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 71

Query:   264 EDAQRAINKLNGYGYDNLILRVEWATP 290
             +DA+RAI+ LNG    +  ++V +A P
Sbjct:    72 KDAERAISTLNGLRLQSKTIKVSYARP 98

 Score = 113 (44.8 bits), Expect = 0.00044, P = 0.00044
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + ++ L     + D+ ++F  FG +    V VDQ TG+SRG  F+ F  + +A+ A
Sbjct:   105 DAN-LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163

Query:   270 INKLNGY 276
             I   NG+
Sbjct:   164 ITSFNGH 170


>UNIPROTKB|A2VDK5 [details] [associations]
            symbol:ELAVL4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0017091 "AU-rich element binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 eggNOG:COG0724
            HOVERGEN:HBG002295 HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 KO:K13208 OrthoDB:EOG4JHCFV CTD:1996
            OMA:SNSRNCP EMBL:DAAA02008922 EMBL:DAAA02008923 EMBL:BC133283
            IPI:IPI00729244 RefSeq:NP_001075075.1 UniGene:Bt.26853 SMR:A2VDK5
            STRING:A2VDK5 Ensembl:ENSBTAT00000028031 GeneID:535408
            KEGG:bta:535408 InParanoid:A2VDK5 NextBio:20876736 Uniprot:A2VDK5
        Length = 366

 Score = 149 (57.5 bits), Expect = 3.6e-08, P = 3.6e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS D+ E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   287 VYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 346

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T + +
Sbjct:   347 YRLGDRVLQVSFKTNKAH 364

 Score = 128 (50.1 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 32/100 (32%), Positives = 52/100 (52%)

Query:   191 PPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTG 250
             P  M+ GA    TD  + N    + V  L ++  + +   LF   G +    +  D+ TG
Sbjct:    32 PSPMQTGA---ATDDSKTN----LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 84

Query:   251 ISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
              S G+GFVN+++ +DA++AIN LNG       ++V +A P
Sbjct:    85 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 124

 Score = 115 (45.5 bits), Expect = 0.00032, P = 0.00032
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   131 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 189

Query:   270 INKLNG 275
             I  LNG
Sbjct:   190 IKGLNG 195


>UNIPROTKB|J9PAL3 [details] [associations]
            symbol:ELAVL4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 KO:K13208 CTD:1996 EMBL:AAEX03009733
            RefSeq:XP_859918.1 ProteinModelPortal:J9PAL3
            Ensembl:ENSCAFT00000045412 GeneID:475361 KEGG:cfa:475361
            Uniprot:J9PAL3
        Length = 366

 Score = 149 (57.5 bits), Expect = 3.6e-08, P = 3.6e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS D+ E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   287 VYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 346

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T + +
Sbjct:   347 YRLGDRVLQVSFKTNKAH 364

 Score = 128 (50.1 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 32/100 (32%), Positives = 52/100 (52%)

Query:   191 PPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTG 250
             P  M+ GA    TD  + N    + V  L ++  + +   LF   G +    +  D+ TG
Sbjct:    32 PSPMQTGA---ATDDSKTN----LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 84

Query:   251 ISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
              S G+GFVN+++ +DA++AIN LNG       ++V +A P
Sbjct:    85 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 124

 Score = 115 (45.5 bits), Expect = 0.00032, P = 0.00032
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   131 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 189

Query:   270 INKLNG 275
             I  LNG
Sbjct:   190 IKGLNG 195


>UNIPROTKB|B1APY9 [details] [associations]
            symbol:ELAVL4 "cDNA FLJ50619, highly similar to ELAV-like
            protein 4" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            EMBL:AL645730 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 EMBL:AL583843 EMBL:AL592182 EMBL:AL731870
            UniGene:Hs.213050 HGNC:HGNC:3315 EMBL:AK298902 IPI:IPI00643012
            SMR:B1APY9 STRING:B1APY9 Ensembl:ENST00000371819 UCSC:uc009vyu.3
            Uniprot:B1APY9
        Length = 371

 Score = 149 (57.5 bits), Expect = 3.7e-08, P = 3.7e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS D+ E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   292 VYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 351

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T + +
Sbjct:   352 YRLGDRVLQVSFKTNKAH 369

 Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 32/100 (32%), Positives = 52/100 (52%)

Query:   191 PPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTG 250
             P  M+ GA    TD  + N    + V  L ++  + +   LF   G +    +  D+ TG
Sbjct:    37 PSPMQTGAT---TDDSKTN----LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 89

Query:   251 ISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
              S G+GFVN+++ +DA++AIN LNG       ++V +A P
Sbjct:    90 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 129

 Score = 115 (45.5 bits), Expect = 0.00033, P = 0.00033
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   136 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 194

Query:   270 INKLNG 275
             I  LNG
Sbjct:   195 IKGLNG 200


>RGD|1560027 [details] [associations]
            symbol:Elavl4 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 4" species:10116 "Rattus norvegicus" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0017091 "AU-rich element
            binding" evidence=IEA;ISO;ISS] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 KO:K13208 OrthoDB:EOG4JHCFV CTD:1996 OMA:SNSRNCP
            EMBL:S83320 IPI:IPI00560167 RefSeq:NP_001071119.1 UniGene:Rn.134702
            ProteinModelPortal:O09032 SMR:O09032 STRING:O09032
            PhosphoSite:O09032 GeneID:432358 KEGG:rno:432358 UCSC:RGD:1560027
            InParanoid:O09032 NextBio:696819 ArrayExpress:O09032
            Genevestigator:O09032 GermOnline:ENSRNOG00000023601 Uniprot:O09032
        Length = 373

 Score = 149 (57.5 bits), Expect = 3.7e-08, P = 3.7e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS D+ E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   294 VYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 353

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T + +
Sbjct:   354 YRLGDRVLQVSFKTNKAH 371

 Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 32/100 (32%), Positives = 52/100 (52%)

Query:   191 PPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTG 250
             P  M+ GA    TD  + N    + V  L ++  + +   LF   G +    +  D+ TG
Sbjct:    25 PSPMQTGA---ATDDSKTN----LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 77

Query:   251 ISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
              S G+GFVN+++ +DA++AIN LNG       ++V +A P
Sbjct:    78 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 117

 Score = 115 (45.5 bits), Expect = 0.00033, P = 0.00033
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   124 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 182

Query:   270 INKLNG 275
             I  LNG
Sbjct:   183 IKGLNG 188


>UNIPROTKB|O09032 [details] [associations]
            symbol:Elavl4 "ELAV-like protein 4" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 eggNOG:COG0724 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661 KO:K13208 OrthoDB:EOG4JHCFV
            CTD:1996 OMA:SNSRNCP EMBL:S83320 IPI:IPI00560167
            RefSeq:NP_001071119.1 UniGene:Rn.134702 ProteinModelPortal:O09032
            SMR:O09032 STRING:O09032 PhosphoSite:O09032 GeneID:432358
            KEGG:rno:432358 UCSC:RGD:1560027 InParanoid:O09032 NextBio:696819
            ArrayExpress:O09032 Genevestigator:O09032
            GermOnline:ENSRNOG00000023601 Uniprot:O09032
        Length = 373

 Score = 149 (57.5 bits), Expect = 3.7e-08, P = 3.7e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS D+ E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   294 VYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 353

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T + +
Sbjct:   354 YRLGDRVLQVSFKTNKAH 371

 Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 32/100 (32%), Positives = 52/100 (52%)

Query:   191 PPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTG 250
             P  M+ GA    TD  + N    + V  L ++  + +   LF   G +    +  D+ TG
Sbjct:    25 PSPMQTGA---ATDDSKTN----LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 77

Query:   251 ISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
              S G+GFVN+++ +DA++AIN LNG       ++V +A P
Sbjct:    78 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 117

 Score = 115 (45.5 bits), Expect = 0.00033, P = 0.00033
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   124 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 182

Query:   270 INKLNG 275
             I  LNG
Sbjct:   183 IKGLNG 188


>UNIPROTKB|F1PSC4 [details] [associations]
            symbol:ELAVL1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:RFGGPLH EMBL:AAEX03012469
            Ensembl:ENSCAFT00000029161 Uniprot:F1PSC4
        Length = 334

 Score = 148 (57.2 bits), Expect = 3.8e-08, P = 3.8e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             + NL +D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N E+A  AI  LNG
Sbjct:   256 IYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 315

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + IL+V + T +++
Sbjct:   316 YRLGDKILQVSFKTNKSH 333

 Score = 131 (51.2 bits), Expect = 3.9e-06, P = 3.9e-06
 Identities = 30/87 (34%), Positives = 46/87 (52%)

Query:   204 DMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNK 263
             D R      ++ V  L ++  + +L  LF   G V    +  D+  G S G+GFVN+V  
Sbjct:    20 DCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 79

Query:   264 EDAQRAINKLNGYGYDNLILRVEWATP 290
             +DA+RAIN LNG    +  ++V +A P
Sbjct:    80 KDAERAINTLNGLRLQSKTIKVSYARP 106

 Score = 113 (44.8 bits), Expect = 0.00046, P = 0.00046
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + ++ L     + D+ ++F  FG +    V VDQ TG+SRG  F+ F  + +A+ A
Sbjct:   113 DAN-LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 171

Query:   270 INKLNGY 276
             I   NG+
Sbjct:   172 ITSFNGH 178


>UNIPROTKB|E2R4B2 [details] [associations]
            symbol:TRA2A "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 OMA:DRYEEYD EMBL:AAEX03009371
            Ensembl:ENSCAFT00000004456 Uniprot:E2R4B2
        Length = 278

 Score = 146 (56.5 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 38/96 (39%), Positives = 54/96 (56%)

Query:   200 RTGTDMRRRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFV 258
             R  T  R   D N+ + V  LS  T E DL E+F  +G +S V V  DQ+TG SRGF FV
Sbjct:   106 RRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 165

Query:   259 NFVNKEDAQRAINKLNGYGYDNLILRVEWA-TPRTN 293
              F   +D++ A+ + NG   D   +RV+++ T R +
Sbjct:   166 YFERIDDSKEAMERANGMELDGRRIRVDYSITKRAH 201


>UNIPROTKB|F1LRX3 [details] [associations]
            symbol:Elavl4 "ELAV-like protein 4" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 TIGRFAMs:TIGR01661 IPI:IPI00808644
            Ensembl:ENSRNOT00000067007 ArrayExpress:F1LRX3 Uniprot:F1LRX3
        Length = 380

 Score = 149 (57.5 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS D+ E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   301 VYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 360

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T + +
Sbjct:   361 YRLGDRVLQVSFKTNKAH 378

 Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 32/100 (32%), Positives = 52/100 (52%)

Query:   191 PPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTG 250
             P  M+ GA    TD  + N    + V  L ++  + +   LF   G +    +  D+ TG
Sbjct:    32 PSPMQTGA---ATDDSKTN----LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 84

Query:   251 ISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
              S G+GFVN+++ +DA++AIN LNG       ++V +A P
Sbjct:    85 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 124

 Score = 115 (45.5 bits), Expect = 0.00035, P = 0.00035
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   131 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 189

Query:   270 INKLNG 275
             I  LNG
Sbjct:   190 IKGLNG 195


>UNIPROTKB|P26378 [details] [associations]
            symbol:ELAVL4 "ELAV-like protein 4" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017091
            "AU-rich element binding" evidence=IDA] [GO:0006397 "mRNA
            processing" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=TAS] [GO:0006396 "RNA
            processing" evidence=TAS] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 EMBL:CH471059
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0003730
            eggNOG:COG0724 EMBL:AL645730 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661 KO:K13208 EMBL:M62843
            EMBL:AY033995 EMBL:AY033996 EMBL:AY033997 EMBL:AY033998
            EMBL:AK297338 EMBL:AL583843 EMBL:AL592182 EMBL:AL731870
            EMBL:BC036071 IPI:IPI00395507 IPI:IPI00479625 IPI:IPI00607677
            IPI:IPI00644588 IPI:IPI00978372 PIR:A40348 RefSeq:NP_001138246.1
            RefSeq:NP_001138247.1 RefSeq:NP_001138248.1 RefSeq:NP_001138249.1
            RefSeq:NP_068771.2 UniGene:Hs.213050 PDB:1FXL PDB:1G2E PDBsum:1FXL
            PDBsum:1G2E ProteinModelPortal:P26378 SMR:P26378 IntAct:P26378
            MINT:MINT-1471928 STRING:P26378 PhosphoSite:P26378 DMDM:223590202
            PaxDb:P26378 PRIDE:P26378 Ensembl:ENST00000357083
            Ensembl:ENST00000371823 Ensembl:ENST00000371824
            Ensembl:ENST00000371827 Ensembl:ENST00000448907 GeneID:1996
            KEGG:hsa:1996 UCSC:uc001crz.3 UCSC:uc001csa.3 UCSC:uc001csb.2
            UCSC:uc001csc.3 CTD:1996 GeneCards:GC01P050513 HGNC:HGNC:3315
            HPA:CAB004442 MIM:168360 neXtProt:NX_P26378 PharmGKB:PA27743
            EvolutionaryTrace:P26378 GenomeRNAi:1996 NextBio:8073
            ArrayExpress:P26378 Bgee:P26378 CleanEx:HS_ELAVL4
            Genevestigator:P26378 GermOnline:ENSG00000162374 Uniprot:P26378
        Length = 380

 Score = 149 (57.5 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS D+ E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   301 VYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 360

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T + +
Sbjct:   361 YRLGDRVLQVSFKTNKAH 378

 Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 32/100 (32%), Positives = 52/100 (52%)

Query:   191 PPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTG 250
             P  M+ GA    TD  + N    + V  L ++  + +   LF   G +    +  D+ TG
Sbjct:    32 PSPMQTGAT---TDDSKTN----LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 84

Query:   251 ISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
              S G+GFVN+++ +DA++AIN LNG       ++V +A P
Sbjct:    85 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 124

 Score = 115 (45.5 bits), Expect = 0.00035, P = 0.00035
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   131 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 189

Query:   270 INKLNG 275
             I  LNG
Sbjct:   190 IKGLNG 195


>UNIPROTKB|Q06AA6 [details] [associations]
            symbol:TRA2A "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0000398 eggNOG:COG0724
            HOGENOM:HOG000276232 GeneTree:ENSGT00700000104309 CTD:29896
            HOVERGEN:HBG102125 KO:K12897 OMA:DRYEEYD OrthoDB:EOG4BVRW2
            EMBL:CU928731 EMBL:DQ972958 RefSeq:NP_001070691.1 UniGene:Ssc.14084
            SMR:Q06AA6 Ensembl:ENSSSCT00000016762 GeneID:768110 KEGG:ssc:768110
            Uniprot:Q06AA6
        Length = 279

 Score = 146 (56.5 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 38/96 (39%), Positives = 54/96 (56%)

Query:   200 RTGTDMRRRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFV 258
             R  T  R   D N+ + V  LS  T E DL E+F  +G +S V V  DQ+TG SRGF FV
Sbjct:   106 RRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 165

Query:   259 NFVNKEDAQRAINKLNGYGYDNLILRVEWA-TPRTN 293
              F   +D++ A+ + NG   D   +RV+++ T R +
Sbjct:   166 YFERIDDSKEAMERANGMELDGRRIRVDYSITKRAH 201


>UNIPROTKB|F1P856 [details] [associations]
            symbol:ELAVL4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:SNSRNCP EMBL:AAEX03009733
            Ensembl:ENSCAFT00000006315 Uniprot:F1P856
        Length = 382

 Score = 149 (57.5 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS D+ E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   303 VYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 362

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T + +
Sbjct:   363 YRLGDRVLQVSFKTNKAH 380

 Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 32/100 (32%), Positives = 52/100 (52%)

Query:   191 PPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTG 250
             P  M+ GA    TD  + N    + V  L ++  + +   LF   G +    +  D+ TG
Sbjct:    48 PSPMQTGA---ATDDSKTN----LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 100

Query:   251 ISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
              S G+GFVN+++ +DA++AIN LNG       ++V +A P
Sbjct:   101 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 140

 Score = 115 (45.5 bits), Expect = 0.00035, P = 0.00035
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   147 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 205

Query:   270 INKLNG 275
             I  LNG
Sbjct:   206 IKGLNG 211


>UNIPROTKB|F1LRL1 [details] [associations]
            symbol:Elavl4 "ELAV-like protein 4" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 TIGRFAMs:TIGR01661 IPI:IPI00763452
            Ensembl:ENSRNOT00000064277 ArrayExpress:F1LRL1 Uniprot:F1LRL1
        Length = 384

 Score = 149 (57.5 bits), Expect = 4.0e-08, P = 4.0e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS D+ E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   305 VYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 364

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T + +
Sbjct:   365 YRLGDRVLQVSFKTNKAH 382

 Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 32/100 (32%), Positives = 52/100 (52%)

Query:   191 PPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTG 250
             P  M+ GA    TD  + N    + V  L ++  + +   LF   G +    +  D+ TG
Sbjct:    36 PSPMQTGA---ATDDSKTN----LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 88

Query:   251 ISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
              S G+GFVN+++ +DA++AIN LNG       ++V +A P
Sbjct:    89 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 128

 Score = 115 (45.5 bits), Expect = 0.00035, P = 0.00035
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   135 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 193

Query:   270 INKLNG 275
             I  LNG
Sbjct:   194 IKGLNG 199


>MGI|MGI:107427 [details] [associations]
            symbol:Elavl4 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 4 (Hu antigen D)" species:10090 "Mus musculus"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:107427 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 eggNOG:COG0724 EMBL:AL627425 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 KO:K13208 OrthoDB:EOG4JHCFV CTD:1996
            EMBL:D31953 EMBL:AF041341 IPI:IPI00229977 IPI:IPI00466120
            PIR:JC2298 RefSeq:NP_034618.2 UniGene:Mm.3970
            ProteinModelPortal:Q61701 SMR:Q61701 STRING:Q61701
            PhosphoSite:Q61701 PaxDb:Q61701 PRIDE:Q61701
            Ensembl:ENSMUST00000106597 GeneID:15572 KEGG:mmu:15572
            InParanoid:A2A9R7 OMA:SNSRNCP NextBio:288560 Bgee:Q61701
            Genevestigator:Q61701 GermOnline:ENSMUSG00000028546 Uniprot:Q61701
        Length = 385

 Score = 149 (57.5 bits), Expect = 4.0e-08, P = 4.0e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS D+ E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   306 VYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 365

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T + +
Sbjct:   366 YRLGDRVLQVSFKTNKAH 383

 Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 32/100 (32%), Positives = 52/100 (52%)

Query:   191 PPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTG 250
             P  M+ GA    TD  + N    + V  L ++  + +   LF   G +    +  D+ TG
Sbjct:    37 PSPMQTGA---ATDDSKTN----LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 89

Query:   251 ISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
              S G+GFVN+++ +DA++AIN LNG       ++V +A P
Sbjct:    90 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 129

 Score = 115 (45.5 bits), Expect = 0.00035, P = 0.00035
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   136 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 194

Query:   270 INKLNG 275
             I  LNG
Sbjct:   195 IKGLNG 200


>UNIPROTKB|B1APY8 [details] [associations]
            symbol:ELAVL4 "ELAV-like protein 4" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 EMBL:AL645730 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 OrthoDB:EOG4JHCFV EMBL:AL583843 EMBL:AL592182
            EMBL:AL731870 UniGene:Hs.213050 HGNC:HGNC:3315 OMA:SNSRNCP
            IPI:IPI00513758 SMR:B1APY8 STRING:B1APY8 Ensembl:ENST00000371821
            Uniprot:B1APY8
        Length = 385

 Score = 149 (57.5 bits), Expect = 4.0e-08, P = 4.0e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS D+ E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   306 VYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 365

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T + +
Sbjct:   366 YRLGDRVLQVSFKTNKAH 383

 Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 32/100 (32%), Positives = 52/100 (52%)

Query:   191 PPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTG 250
             P  M+ GA    TD  + N    + V  L ++  + +   LF   G +    +  D+ TG
Sbjct:    37 PSPMQTGAT---TDDSKTN----LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 89

Query:   251 ISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
              S G+GFVN+++ +DA++AIN LNG       ++V +A P
Sbjct:    90 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 129

 Score = 115 (45.5 bits), Expect = 0.00035, P = 0.00035
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   136 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 194

Query:   270 INKLNG 275
             I  LNG
Sbjct:   195 IKGLNG 200


>UNIPROTKB|Q2KJ71 [details] [associations]
            symbol:TRA2A "Transformer 2 alpha homolog (Drosophila)"
            species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0000398 eggNOG:COG0724 HOGENOM:HOG000276232
            GeneTree:ENSGT00700000104309 CTD:29896 HOVERGEN:HBG102125 KO:K12897
            OMA:DRYEEYD OrthoDB:EOG4BVRW2 EMBL:DAAA02010222 EMBL:BC105489
            IPI:IPI00695902 RefSeq:NP_001039845.1 UniGene:Bt.43563 SMR:Q2KJ71
            STRING:Q2KJ71 Ensembl:ENSBTAT00000016756 GeneID:534586
            KEGG:bta:534586 InParanoid:Q2KJ71 NextBio:20876456 Uniprot:Q2KJ71
        Length = 281

 Score = 146 (56.5 bits), Expect = 4.0e-08, P = 4.0e-08
 Identities = 38/96 (39%), Positives = 54/96 (56%)

Query:   200 RTGTDMRRRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFV 258
             R  T  R   D N+ + V  LS  T E DL E+F  +G +S V V  DQ+TG SRGF FV
Sbjct:   106 RRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 165

Query:   259 NFVNKEDAQRAINKLNGYGYDNLILRVEWA-TPRTN 293
              F   +D++ A+ + NG   D   +RV+++ T R +
Sbjct:   166 YFERIDDSKEAMERANGMELDGRRIRVDYSITKRAH 201


>MGI|MGI:1933972 [details] [associations]
            symbol:Tra2a "transformer 2 alpha homolog (Drosophila)"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0042802 "identical protein binding"
            evidence=IPI] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:1933972 GO:GO:0005634
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 eggNOG:COG0724 HOGENOM:HOG000276232
            HOVERGEN:HBG102125 OrthoDB:EOG4BVRW2 ChiTaRS:TRA2A EMBL:BC057448
            IPI:IPI01008014 UniGene:Mm.196598 ProteinModelPortal:Q6PFR5
            SMR:Q6PFR5 IntAct:Q6PFR5 STRING:Q6PFR5 PhosphoSite:Q6PFR5
            PaxDb:Q6PFR5 PRIDE:Q6PFR5 UCSC:uc009bwm.1 InParanoid:Q6PFR5
            CleanEx:MM_TRA2A Genevestigator:Q6PFR5
            GermOnline:ENSMUSG00000029817 Uniprot:Q6PFR5
        Length = 281

 Score = 146 (56.5 bits), Expect = 4.0e-08, P = 4.0e-08
 Identities = 38/96 (39%), Positives = 54/96 (56%)

Query:   200 RTGTDMRRRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFV 258
             R  T  R   D N+ + V  LS  T E DL E+F  +G +S V V  DQ+TG SRGF FV
Sbjct:   104 RRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 163

Query:   259 NFVNKEDAQRAINKLNGYGYDNLILRVEWA-TPRTN 293
              F   +D++ A+ + NG   D   +RV+++ T R +
Sbjct:   164 YFERIDDSKEAMERANGMELDGRRIRVDYSITKRAH 199


>UNIPROTKB|Q13595 [details] [associations]
            symbol:TRA2A "Transformer-2 protein homolog alpha"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000398
            "mRNA splicing, via spliceosome" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0000398
            eggNOG:COG0724 HOGENOM:HOG000276232 EMBL:U53209 EMBL:BC017094
            IPI:IPI00013891 IPI:IPI00220447 RefSeq:NP_037425.1
            UniGene:Hs.445652 ProteinModelPortal:Q13595 SMR:Q13595
            IntAct:Q13595 MINT:MINT-1683046 STRING:Q13595 PhosphoSite:Q13595
            DMDM:4033480 PaxDb:Q13595 PRIDE:Q13595 DNASU:29896
            Ensembl:ENST00000297071 GeneID:29896 KEGG:hsa:29896 UCSC:uc003swi.3
            CTD:29896 GeneCards:GC07M023544 HGNC:HGNC:16645 HPA:HPA054018
            MIM:602718 neXtProt:NX_Q13595 PharmGKB:PA164726707
            HOVERGEN:HBG102125 InParanoid:Q13595 KO:K12897 OMA:DRYEEYD
            OrthoDB:EOG4BVRW2 PhylomeDB:Q13595 ChiTaRS:TRA2A GenomeRNAi:29896
            NextBio:52459 ArrayExpress:Q13595 Bgee:Q13595 Genevestigator:Q13595
            GermOnline:ENSG00000164548 Uniprot:Q13595
        Length = 282

 Score = 146 (56.5 bits), Expect = 4.1e-08, P = 4.1e-08
 Identities = 38/96 (39%), Positives = 54/96 (56%)

Query:   200 RTGTDMRRRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFV 258
             R  T  R   D N+ + V  LS  T E DL E+F  +G +S V V  DQ+TG SRGF FV
Sbjct:   106 RRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 165

Query:   259 NFVNKEDAQRAINKLNGYGYDNLILRVEWA-TPRTN 293
              F   +D++ A+ + NG   D   +RV+++ T R +
Sbjct:   166 YFERIDDSKEAMERANGMELDGRRIRVDYSITKRAH 201


>RGD|1562563 [details] [associations]
            symbol:Tra2a "transformer 2 alpha homolog (Drosophila)"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IEA;ISO] [GO:0042802 "identical protein binding"
            evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:1562563 GO:GO:0005634
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0000398
            eggNOG:COG0724 HOGENOM:HOG000276232 GeneTree:ENSGT00700000104309
            HOVERGEN:HBG102125 OrthoDB:EOG4BVRW2 EMBL:BC161978 IPI:IPI00201580
            UniGene:Rn.203363 SMR:B1WC25 STRING:B1WC25
            Ensembl:ENSRNOT00000012325 UCSC:RGD:1562563 Genevestigator:B1WC25
            Uniprot:B1WC25
        Length = 282

 Score = 146 (56.5 bits), Expect = 4.1e-08, P = 4.1e-08
 Identities = 38/96 (39%), Positives = 54/96 (56%)

Query:   200 RTGTDMRRRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFV 258
             R  T  R   D N+ + V  LS  T E DL E+F  +G +S V V  DQ+TG SRGF FV
Sbjct:   104 RRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 163

Query:   259 NFVNKEDAQRAINKLNGYGYDNLILRVEWA-TPRTN 293
              F   +D++ A+ + NG   D   +RV+++ T R +
Sbjct:   164 YFERIDDSKEAMERANGMELDGRRIRVDYSITKRAH 199


>UNIPROTKB|Q91903 [details] [associations]
            symbol:elavl2 "ELAV-like protein 2" species:8355 "Xenopus
            laevis" [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0003730 "mRNA 3'-UTR
            binding" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005938 "cell cortex" evidence=IDA] [GO:0007399 "nervous system
            development" evidence=IMP] [GO:0008298 "intracellular mRNA
            localization" evidence=IMP] [GO:0017131 "uridine-rich cytoplasmic
            polyadenylylation element binding" evidence=IDA] [GO:0030529
            "ribonucleoprotein complex" evidence=IDA;IPI] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0051260 "protein homooligomerization" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005938 GO:GO:0007399 GO:GO:0000166
            GO:GO:0051260 Gene3D:3.30.70.330 GO:GO:0000122 GO:GO:0003730
            GO:GO:0030529 GO:GO:0008298 HOVERGEN:HBG002295 TIGRFAMs:TIGR01661
            HSSP:P26378 KO:K13208 EMBL:X85111 EMBL:U17597 EMBL:BC170539
            EMBL:BC094189 PIR:I51676 RefSeq:NP_001081035.1
            RefSeq:NP_001081613.1 UniGene:Xl.1648 UniGene:Xl.34955
            ProteinModelPortal:Q91903 SMR:Q91903 MINT:MINT-2880431
            GeneID:394342 GeneID:397952 KEGG:xla:394342 KEGG:xla:397952
            CTD:394342 CTD:397952 Xenbase:XB-GENE-6254447
            Xenbase:XB-GENE-866091 GO:GO:0017131 Uniprot:Q91903
        Length = 389

 Score = 149 (57.5 bits), Expect = 4.1e-08, P = 4.1e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL+ D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   310 VYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 369

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T +T+
Sbjct:   370 YRLGDRVLQVSFKTSKTH 387

 Score = 120 (47.3 bits), Expect = 9.6e-05, P = 9.6e-05
 Identities = 26/83 (31%), Positives = 47/83 (56%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKT-GISRGFGFVNFVNKEDAQ 267
             + + ++ V  L ++  + +L  LF   G +    +  D+ T G S G+GFVN+++ +DA+
Sbjct:    63 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGFVNYIDPKDAE 122

Query:   268 RAINKLNGYGYDNLILRVEWATP 290
             +AIN LNG       ++V +A P
Sbjct:   123 KAINTLNGLRLQTKTIKVSYARP 145

 Score = 115 (45.5 bits), Expect = 0.00036, P = 0.00036
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   152 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 210

Query:   270 INKLNG 275
             I  LNG
Sbjct:   211 IKGLNG 216


>UNIPROTKB|D4A7H6 [details] [associations]
            symbol:Elavl2 "ELAV-like protein 2" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            RGD:628611 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            TIGRFAMs:TIGR01661 IPI:IPI00192584 ProteinModelPortal:D4A7H6
            SMR:D4A7H6 Ensembl:ENSRNOT00000009035 ArrayExpress:D4A7H6
            Uniprot:D4A7H6
        Length = 346

 Score = 148 (57.2 bits), Expect = 4.1e-08, P = 4.1e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL+ D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   267 VYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 326

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T +T+
Sbjct:   327 YRLGDRVLQVSFKTNKTH 344

 Score = 130 (50.8 bits), Expect = 5.4e-06, P = 5.4e-06
 Identities = 28/88 (31%), Positives = 47/88 (53%)

Query:   204 DMRRRNDENSVRVTN-LSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVN 262
             D     D  +  + N L ++  + +L  LF   G +    +  D+ TG S G+GFVN+++
Sbjct:    30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89

Query:   263 KEDAQRAINKLNGYGYDNLILRVEWATP 290
              +DA++AIN LNG       ++V +A P
Sbjct:    90 PKDAEKAINTLNGLRLQTKTIKVSYARP 117

 Score = 116 (45.9 bits), Expect = 0.00022, P = 0.00022
 Identities = 26/66 (39%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TGISRG GF+ F  + +A+ A
Sbjct:   124 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEA 182

Query:   270 INKLNG 275
             I  LNG
Sbjct:   183 IKGLNG 188


>TAIR|locus:2076096 [details] [associations]
            symbol:GRP4 "glycine-rich RNA-binding protein 4"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS;IDA]
            [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003690
            "double-stranded DNA binding" evidence=IDA] [GO:0003697
            "single-stranded DNA binding" evidence=IDA] [GO:0006970 "response
            to osmotic stress" evidence=IMP] [GO:0009409 "response to cold"
            evidence=IEP] [GO:0009414 "response to water deprivation"
            evidence=IEP] [GO:0009651 "response to salt stress" evidence=IMP]
            [GO:0006364 "rRNA processing" evidence=RCA] [GO:0009664 "plant-type
            cell wall organization" evidence=RCA] [GO:0042545 "cell wall
            modification" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
            EMBL:CP002686 GO:GO:0000166 GO:GO:0009651 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0003690 GO:GO:0003697 EMBL:AP001297
            eggNOG:COG0724 HOGENOM:HOG000276232 HSSP:Q14103
            ProtClustDB:PLN03134 EMBL:AY070755 EMBL:AY097374 EMBL:AY085838
            IPI:IPI00523873 RefSeq:NP_189025.1 RefSeq:NP_850629.1
            UniGene:At.8272 ProteinModelPortal:Q9LIS2 SMR:Q9LIS2 STRING:Q9LIS2
            PaxDb:Q8LDS0 PRIDE:Q9LIS2 EnsemblPlants:AT3G23830.1
            EnsemblPlants:AT3G23830.2 GeneID:821966 KEGG:ath:AT3G23830
            GeneFarm:3951 TAIR:At3g23830 InParanoid:Q9LIS2 OMA:CEDSANN
            PhylomeDB:Q9LIS2 Genevestigator:Q9LIS2 Uniprot:Q9LIS2
        Length = 136

 Score = 129 (50.5 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 30/78 (38%), Positives = 45/78 (57%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V  LS  T +  L + F  FG V+   V  D++TG SRGFGFV+F  ++ A  AI +++G
Sbjct:    39 VGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDG 98

Query:   276 YGYDNLILRVEWATPRTN 293
                +   +RV  AT R++
Sbjct:    99 KELNGRQIRVNLATERSS 116


>TAIR|locus:2179624 [details] [associations]
            symbol:AT5G19030 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:CP002688 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00544212 RefSeq:NP_197404.2
            UniGene:At.31343 ProteinModelPortal:F4JZK9 SMR:F4JZK9
            EnsemblPlants:AT5G19030.1 GeneID:832022 KEGG:ath:AT5G19030
            OMA:RTISCVA PhylomeDB:F4JZK9 Uniprot:F4JZK9
        Length = 172

 Score = 129 (50.5 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 30/95 (31%), Positives = 51/95 (53%)

Query:   196 AGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGF 255
             AG + T       +  +S+ V   S+   E  L ++F  FG V+ V +  +++T  S G+
Sbjct:    61 AGDDETREASSLPSSISSLFVKGFSDSVSEGRLKKVFSEFGQVTNVKIIANERTRQSLGY 120

Query:   256 GFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
             G+V F +KEDAQ A+  +NG  +D   + V++  P
Sbjct:   121 GYVWFNSKEDAQSAVEAMNGKFFDGRFILVKFGQP 155


>UNIPROTKB|B4DVB8 [details] [associations]
            symbol:ELAVL1 "ELAV-like protein 1" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0006417 "regulation of translation"
            evidence=IMP] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 HOVERGEN:HBG002295 UniGene:Hs.184492
            UniGene:Hs.713744 HGNC:HGNC:3312 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 EMBL:AC010336 EMBL:AC008975 EMBL:AK301013
            IPI:IPI00301936 ProteinModelPortal:B4DVB8 SMR:B4DVB8 IntAct:B4DVB8
            STRING:B4DVB8 PRIDE:B4DVB8 Ensembl:ENST00000351593 OMA:RFGGPLH
            ArrayExpress:B4DVB8 Bgee:B4DVB8 Uniprot:B4DVB8
        Length = 353

 Score = 148 (57.2 bits), Expect = 4.3e-08, P = 4.3e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             + NL +D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N E+A  AI  LNG
Sbjct:   275 IYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 334

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + IL+V + T +++
Sbjct:   335 YRLGDKILQVSFKTNKSH 352

 Score = 131 (51.2 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 30/87 (34%), Positives = 46/87 (52%)

Query:   204 DMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNK 263
             D R      ++ V  L ++  + +L  LF   G V    +  D+  G S G+GFVN+V  
Sbjct:    39 DCRGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 98

Query:   264 EDAQRAINKLNGYGYDNLILRVEWATP 290
             +DA+RAIN LNG    +  ++V +A P
Sbjct:    99 KDAERAINTLNGLRLQSKTIKVSYARP 125

 Score = 113 (44.8 bits), Expect = 0.00051, P = 0.00051
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + ++ L     + D+ ++F  FG +    V VDQ TG+SRG  F+ F  + +A+ A
Sbjct:   132 DAN-LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 190

Query:   270 INKLNGY 276
             I   NG+
Sbjct:   191 ITSFNGH 197


>UNIPROTKB|Q12926 [details] [associations]
            symbol:ELAVL2 "ELAV-like protein 2" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=TAS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0006355 GO:GO:0000166
            Gene3D:3.30.70.330 EMBL:CH471071 GO:GO:0003730 eggNOG:COG0724
            HOVERGEN:HBG002295 HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            EMBL:U12431 EMBL:U29943 EMBL:AB209294 EMBL:AL161628 EMBL:AL445623
            EMBL:BC030692 IPI:IPI00030250 IPI:IPI00219967 PIR:I38726 PIR:I39077
            RefSeq:NP_001164666.1 RefSeq:NP_001164668.1 RefSeq:NP_004423.2
            UniGene:Hs.166109 ProteinModelPortal:Q12926 SMR:Q12926
            STRING:Q12926 PhosphoSite:Q12926 DMDM:93141258 PaxDb:Q12926
            PRIDE:Q12926 DNASU:1993 Ensembl:ENST00000223951
            Ensembl:ENST00000380110 Ensembl:ENST00000380117
            Ensembl:ENST00000397312 Ensembl:ENST00000544538 GeneID:1993
            KEGG:hsa:1993 UCSC:uc003zps.3 UCSC:uc003zpu.3 CTD:1993
            GeneCards:GC09M023690 HGNC:HGNC:3313 HPA:CAB022222 MIM:601673
            neXtProt:NX_Q12926 PharmGKB:PA27741 InParanoid:Q12926 KO:K13208
            OrthoDB:EOG4JHCFV PhylomeDB:Q12926 GenomeRNAi:1993 NextBio:8059
            ArrayExpress:Q12926 Bgee:Q12926 CleanEx:HS_ELAVL2
            Genevestigator:Q12926 GermOnline:ENSG00000107105 Uniprot:Q12926
        Length = 359

 Score = 148 (57.2 bits), Expect = 4.5e-08, P = 4.5e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL+ D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   280 VYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 339

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T +T+
Sbjct:   340 YRLGDRVLQVSFKTNKTH 357

 Score = 130 (50.8 bits), Expect = 5.8e-06, P = 5.8e-06
 Identities = 28/88 (31%), Positives = 47/88 (53%)

Query:   204 DMRRRNDENSVRVTN-LSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVN 262
             D     D  +  + N L ++  + +L  LF   G +    +  D+ TG S G+GFVN+++
Sbjct:    30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89

Query:   263 KEDAQRAINKLNGYGYDNLILRVEWATP 290
              +DA++AIN LNG       ++V +A P
Sbjct:    90 PKDAEKAINTLNGLRLQTKTIKVSYARP 117

 Score = 116 (45.9 bits), Expect = 0.00024, P = 0.00024
 Identities = 26/66 (39%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TGISRG GF+ F  + +A+ A
Sbjct:   124 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEA 182

Query:   270 INKLNG 275
             I  LNG
Sbjct:   183 IKGLNG 188


>RGD|628611 [details] [associations]
            symbol:Elavl2 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 2 (Hu antigen B)" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            RGD:628611 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 OrthoDB:EOG4JHCFV EMBL:AB098713 IPI:IPI00782044
            UniGene:Rn.12662 ProteinModelPortal:Q8CH84 SMR:Q8CH84 STRING:Q8CH84
            PhosphoSite:Q8CH84 UCSC:RGD:628611 InParanoid:Q8CH84 NextBio:625201
            ArrayExpress:Q8CH84 Genevestigator:Q8CH84
            GermOnline:ENSRNOG00000006853 Uniprot:Q8CH84
        Length = 359

 Score = 148 (57.2 bits), Expect = 4.5e-08, P = 4.5e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL+ D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   280 VYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 339

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T +T+
Sbjct:   340 YRLGDRVLQVSFKTNKTH 357

 Score = 129 (50.5 bits), Expect = 7.7e-06, P = 7.7e-06
 Identities = 28/88 (31%), Positives = 47/88 (53%)

Query:   204 DMRRRNDENSVRVTN-LSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVN 262
             D     D  +  + N L ++  + +L  LF   G +    +  D+ TG S G+GFVN+++
Sbjct:    30 DSGNTEDSKTNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89

Query:   263 KEDAQRAINKLNGYGYDNLILRVEWATP 290
              +DA++AIN LNG       ++V +A P
Sbjct:    90 PKDAEKAINTLNGLRLQTKTIKVSYARP 117

 Score = 116 (45.9 bits), Expect = 0.00024, P = 0.00024
 Identities = 26/66 (39%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TGISRG GF+ F  + +A+ A
Sbjct:   124 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEA 182

Query:   270 INKLNG 275
             I  LNG
Sbjct:   183 IKGLNG 188


>UNIPROTKB|Q8CH84 [details] [associations]
            symbol:Elavl2 "ELAV-like protein 2" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            RGD:628611 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 OrthoDB:EOG4JHCFV EMBL:AB098713 IPI:IPI00782044
            UniGene:Rn.12662 ProteinModelPortal:Q8CH84 SMR:Q8CH84 STRING:Q8CH84
            PhosphoSite:Q8CH84 UCSC:RGD:628611 InParanoid:Q8CH84 NextBio:625201
            ArrayExpress:Q8CH84 Genevestigator:Q8CH84
            GermOnline:ENSRNOG00000006853 Uniprot:Q8CH84
        Length = 359

 Score = 148 (57.2 bits), Expect = 4.5e-08, P = 4.5e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL+ D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   280 VYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 339

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T +T+
Sbjct:   340 YRLGDRVLQVSFKTNKTH 357

 Score = 129 (50.5 bits), Expect = 7.7e-06, P = 7.7e-06
 Identities = 28/88 (31%), Positives = 47/88 (53%)

Query:   204 DMRRRNDENSVRVTN-LSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVN 262
             D     D  +  + N L ++  + +L  LF   G +    +  D+ TG S G+GFVN+++
Sbjct:    30 DSGNTEDSKTNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89

Query:   263 KEDAQRAINKLNGYGYDNLILRVEWATP 290
              +DA++AIN LNG       ++V +A P
Sbjct:    90 PKDAEKAINTLNGLRLQTKTIKVSYARP 117

 Score = 116 (45.9 bits), Expect = 0.00024, P = 0.00024
 Identities = 26/66 (39%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TGISRG GF+ F  + +A+ A
Sbjct:   124 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEA 182

Query:   270 INKLNG 275
             I  LNG
Sbjct:   183 IKGLNG 188


>MGI|MGI:1100887 [details] [associations]
            symbol:Elavl2 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 2 (Hu antigen B)" species:10090 "Mus musculus"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:1100887 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 eggNOG:COG0724 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 CTD:1993 KO:K13208 EMBL:U29088
            IPI:IPI00121676 PIR:JC6057 RefSeq:NP_034616.1 UniGene:Mm.318042
            ProteinModelPortal:Q60899 SMR:Q60899 STRING:Q60899
            PhosphoSite:Q60899 PaxDb:Q60899 PRIDE:Q60899
            Ensembl:ENSMUST00000008633 GeneID:15569 KEGG:mmu:15569
            InParanoid:Q60899 NextBio:288546 Bgee:Q60899 Genevestigator:Q60899
            GermOnline:ENSMUSG00000008489 Uniprot:Q60899
        Length = 360

 Score = 148 (57.2 bits), Expect = 4.5e-08, P = 4.5e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL+ D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   281 VYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 340

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T +T+
Sbjct:   341 YRLGDRVLQVSFKTNKTH 358

 Score = 130 (50.8 bits), Expect = 5.8e-06, P = 5.8e-06
 Identities = 28/88 (31%), Positives = 47/88 (53%)

Query:   204 DMRRRNDENSVRVTN-LSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVN 262
             D     D  +  + N L ++  + +L  LF   G +    +  D+ TG S G+GFVN+++
Sbjct:    30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89

Query:   263 KEDAQRAINKLNGYGYDNLILRVEWATP 290
              +DA++AIN LNG       ++V +A P
Sbjct:    90 PKDAEKAINTLNGLRLQTKTIKVSYARP 117

 Score = 116 (45.9 bits), Expect = 0.00024, P = 0.00024
 Identities = 26/66 (39%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TGISRG GF+ F  + +A+ A
Sbjct:   124 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEA 182

Query:   270 INKLNG 275
             I  LNG
Sbjct:   183 IKGLNG 188


>ZFIN|ZDB-GENE-000210-17 [details] [associations]
            symbol:hug "HuG" species:7955 "Danio rerio"
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-000210-17 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 EMBL:CR550302 IPI:IPI00998450
            ProteinModelPortal:F1QUX1 Ensembl:ENSDART00000122728
            ArrayExpress:F1QUX1 Bgee:F1QUX1 Uniprot:F1QUX1
        Length = 368

 Score = 148 (57.2 bits), Expect = 4.8e-08, P = 4.8e-08
 Identities = 32/78 (41%), Positives = 47/78 (60%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL +D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N E+A  AI+ LNG
Sbjct:   290 VYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTSKCKGFGFVTMTNYEEAAMAISSLNG 349

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + + +++
Sbjct:   350 YRLGDKVLQVSFKSSKSH 367

 Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
 Identities = 28/86 (32%), Positives = 45/86 (52%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISR--------GFGFVNFVNKEDAQ 267
             +  L ++  + +L  LF   G V    +  D+  G+S         G+GFVN+VN  DA+
Sbjct:    60 INYLPQNMSQEELRSLFSSIGEVESAKLIRDKMAGMSAHHTLGHSLGYGFVNYVNPSDAE 119

Query:   268 RAINKLNGYGYDNLILRVEWATPRTN 293
             RAIN LNG    +  ++V +A P ++
Sbjct:   120 RAINTLNGLRLQSKTIKVSYARPSSD 145


>UNIPROTKB|D4A7H4 [details] [associations]
            symbol:Tia1 "Protein Tia1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1305742 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            IPI:IPI00214634 ProteinModelPortal:D4A7H4
            Ensembl:ENSRNOT00000023323 Uniprot:D4A7H4
        Length = 281

 Score = 145 (56.1 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 31/76 (40%), Positives = 42/76 (55%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F NK DA+ AI ++
Sbjct:    93 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 152

Query:   274 NGYGYDNLILRVEWAT 289
              G       +R  WAT
Sbjct:   153 GGQWLGGRQIRTNWAT 168


>UNIPROTKB|B1AM49 [details] [associations]
            symbol:ELAVL2 "ELAV-like protein 2" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 TIGRFAMs:TIGR01661 EMBL:AL161628 EMBL:AL445623
            UniGene:Hs.166109 HGNC:HGNC:3313 OMA:RAVENGP SMR:B1AM49
            Ensembl:ENST00000359598 Uniprot:B1AM49
        Length = 387

 Score = 148 (57.2 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL+ D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   308 VYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 367

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T +T+
Sbjct:   368 YRLGDRVLQVSFKTNKTH 385

 Score = 130 (50.8 bits), Expect = 6.7e-06, P = 6.7e-06
 Identities = 28/88 (31%), Positives = 47/88 (53%)

Query:   204 DMRRRNDENSVRVTN-LSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVN 262
             D     D  +  + N L ++  + +L  LF   G +    +  D+ TG S G+GFVN+++
Sbjct:    58 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 117

Query:   263 KEDAQRAINKLNGYGYDNLILRVEWATP 290
              +DA++AIN LNG       ++V +A P
Sbjct:   118 PKDAEKAINTLNGLRLQTKTIKVSYARP 145

 Score = 116 (45.9 bits), Expect = 0.00027, P = 0.00027
 Identities = 26/66 (39%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TGISRG GF+ F  + +A+ A
Sbjct:   152 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEA 210

Query:   270 INKLNG 275
             I  LNG
Sbjct:   211 IKGLNG 216


>UNIPROTKB|E2RI94 [details] [associations]
            symbol:ELAVL2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:RAVENGP EMBL:AAEX03007909
            EMBL:AAEX03007910 EMBL:AAEX03007911 EMBL:AAEX03007912
            Ensembl:ENSCAFT00000002645 Uniprot:E2RI94
        Length = 388

 Score = 148 (57.2 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL+ D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   309 VYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 368

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T +T+
Sbjct:   369 YRLGDRVLQVSFKTNKTH 386

 Score = 130 (50.8 bits), Expect = 6.7e-06, P = 6.7e-06
 Identities = 28/88 (31%), Positives = 47/88 (53%)

Query:   204 DMRRRNDENSVRVTN-LSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVN 262
             D     D  +  + N L ++  + +L  LF   G +    +  D+ TG S G+GFVN+++
Sbjct:    59 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 118

Query:   263 KEDAQRAINKLNGYGYDNLILRVEWATP 290
              +DA++AIN LNG       ++V +A P
Sbjct:   119 PKDAEKAINTLNGLRLQTKTIKVSYARP 146

 Score = 116 (45.9 bits), Expect = 0.00027, P = 0.00027
 Identities = 26/66 (39%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TGISRG GF+ F  + +A+ A
Sbjct:   153 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEA 211

Query:   270 INKLNG 275
             I  LNG
Sbjct:   212 IKGLNG 217


>UNIPROTKB|E1C240 [details] [associations]
            symbol:ELAVL2 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:RAVENGP EMBL:AADN02057847
            EMBL:AADN02057848 EMBL:AADN02057849 EMBL:AADN02057850
            IPI:IPI00584568 ProteinModelPortal:E1C240
            Ensembl:ENSGALT00000025475 Uniprot:E1C240
        Length = 388

 Score = 148 (57.2 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL+ D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   309 VYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 368

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T +T+
Sbjct:   369 YRLGDRVLQVSFKTNKTH 386

 Score = 130 (50.8 bits), Expect = 6.7e-06, P = 6.7e-06
 Identities = 29/88 (32%), Positives = 46/88 (52%)

Query:   204 DMRRRNDENSVRVTN-LSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVN 262
             D     D  +  + N L +   + +L  LF   G +    +  D+ TG S G+GFVN+V+
Sbjct:    58 DSGNTEDSKTNLIVNYLPQSMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVD 117

Query:   263 KEDAQRAINKLNGYGYDNLILRVEWATP 290
              +DA++AIN LNG       ++V +A P
Sbjct:   118 PKDAEKAINTLNGLRLQTKTIKVSYARP 145

 Score = 113 (44.8 bits), Expect = 0.00060, P = 0.00060
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   152 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGMSRGVGFIRFDKRIEAEEA 210

Query:   270 INKLNG 275
             I  LNG
Sbjct:   211 IKGLNG 216


>UNIPROTKB|J3KP15 [details] [associations]
            symbol:SRSF2 "Serine/arginine-rich-splicing factor 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC005837 HGNC:HGNC:10783 ChiTaRS:SRSF2 Ensembl:ENST00000358156
            Uniprot:J3KP15
        Length = 134

 Score = 128 (50.1 bits), Expect = 5.4e-08, P = 5.4e-08
 Identities = 30/76 (39%), Positives = 44/76 (57%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             S++V NL+  T    L  +F  +G V  VY+  D+ T  SRGF FV F +K DA+ A++ 
Sbjct:    15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74

Query:   273 LNGYGYDNLILRVEWA 288
             ++G   D   LRV+ A
Sbjct:    75 MDGAVLDGRELRVQMA 90


>UNIPROTKB|J3QL05 [details] [associations]
            symbol:SRSF2 "Serine/arginine-rich-splicing factor 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC005837 HGNC:HGNC:10783 ChiTaRS:SRSF2 Ensembl:ENST00000583836
            Uniprot:J3QL05
        Length = 130

 Score = 128 (50.1 bits), Expect = 5.4e-08, P = 5.4e-08
 Identities = 30/76 (39%), Positives = 44/76 (57%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             S++V NL+  T    L  +F  +G V  VY+  D+ T  SRGF FV F +K DA+ A++ 
Sbjct:    15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74

Query:   273 LNGYGYDNLILRVEWA 288
             ++G   D   LRV+ A
Sbjct:    75 MDGAVLDGRELRVQMA 90


>WB|WBGene00011059 [details] [associations]
            symbol:R06C1.4 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HOGENOM:HOG000276232 GeneTree:ENSGT00550000074641 HSSP:P33240
            EMBL:Z81106 PIR:T23960 RefSeq:NP_493029.1 ProteinModelPortal:O62337
            SMR:O62337 STRING:O62337 PaxDb:O62337 EnsemblMetazoa:R06C1.4
            GeneID:173076 KEGG:cel:CELE_R06C1.4 UCSC:R06C1.4 CTD:173076
            WormBase:R06C1.4 InParanoid:O62337 OMA:RVYLPVD NextBio:878179
            Uniprot:O62337
        Length = 84

 Score = 128 (50.1 bits), Expect = 5.4e-08, P = 5.4e-08
 Identities = 29/76 (38%), Positives = 42/76 (55%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             SV V N+     E ++   F   G V+ V +  D++TG  RGF FV F  +  AQRA+ +
Sbjct:     7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66

Query:   273 LNGYGYDNLILRVEWA 288
             LNG  ++   LRV +A
Sbjct:    67 LNGVAFNGRNLRVNYA 82


>WB|WBGene00011155 [details] [associations]
            symbol:R09B3.2 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HOGENOM:HOG000276232 GeneTree:ENSGT00550000074641 EMBL:Z81108
            HSSP:P33240 PIR:T24067 RefSeq:NP_493022.1 ProteinModelPortal:O45712
            SMR:O45712 DIP:DIP-25840N MINT:MINT-1057569 STRING:O45712
            PaxDb:O45712 EnsemblMetazoa:R09B3.2 GeneID:173070
            KEGG:cel:CELE_R09B3.2 UCSC:R09B3.2 CTD:173070 WormBase:R09B3.2
            InParanoid:O45712 OMA:NINEARP NextBio:878155 Uniprot:O45712
        Length = 83

 Score = 128 (50.1 bits), Expect = 5.4e-08, P = 5.4e-08
 Identities = 28/76 (36%), Positives = 41/76 (53%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             SV V N    T E +L   F   G ++ V +  D++TG  RGF F+ F  +  AQRA+ +
Sbjct:     6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65

Query:   273 LNGYGYDNLILRVEWA 288
             +NG  ++   LRV  A
Sbjct:    66 MNGAEFNGRPLRVNLA 81


>UNIPROTKB|C9JTN7 [details] [associations]
            symbol:TIA1 "Nucleolysin TIA-1 isoform p40" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000206748
            EMBL:AC016700 HGNC:HGNC:11802 ChiTaRS:TIA1 IPI:IPI00927286
            ProteinModelPortal:C9JTN7 SMR:C9JTN7 STRING:C9JTN7
            Ensembl:ENST00000445587 ArrayExpress:C9JTN7 Bgee:C9JTN7
            Uniprot:C9JTN7
        Length = 285

 Score = 145 (56.1 bits), Expect = 5.5e-08, P = 5.5e-08
 Identities = 31/76 (40%), Positives = 42/76 (55%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F NK DA+ AI ++
Sbjct:    97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156

Query:   274 NGYGYDNLILRVEWAT 289
              G       +R  WAT
Sbjct:   157 GGQWLGGRQIRTNWAT 172


>UNIPROTKB|F1SNK9 [details] [associations]
            symbol:ELAVL2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:RAVENGP EMBL:AEMK01195641
            EMBL:CU407236 Ensembl:ENSSSCT00000005656 Uniprot:F1SNK9
        Length = 400

 Score = 148 (57.2 bits), Expect = 5.7e-08, P = 5.7e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL+ D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   321 VYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 380

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T +T+
Sbjct:   381 YRLGDRVLQVSFKTNKTH 398

 Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
 Identities = 26/66 (39%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TGISRG GF+ F  + +A+ A
Sbjct:   164 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEA 222

Query:   270 INKLNG 275
             I  LNG
Sbjct:   223 IKGLNG 228


>POMBASE|SPBC4F6.14 [details] [associations]
            symbol:SPBC4F6.14 "RNA-binding protein (predicted)"
            species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0006364
            "rRNA processing" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            PomBase:SPBC4F6.14 GO:GO:0005730 GO:GO:0000166 EMBL:CU329671
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006364 eggNOG:COG0724
            HSSP:P52298 HOGENOM:HOG000187841 KO:K14573 OrthoDB:EOG4K6KCP
            PIR:T40511 RefSeq:NP_596114.1 ProteinModelPortal:O74400
            STRING:O74400 EnsemblFungi:SPBC4F6.14.1 GeneID:2540871
            KEGG:spo:SPBC4F6.14 OMA:MHALECL NextBio:20801987 Uniprot:O74400
        Length = 674

 Score = 151 (58.2 bits), Expect = 6.0e-08, P = 6.0e-08
 Identities = 32/83 (38%), Positives = 47/83 (56%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             N  +++ V NL+  T++ DL   F   G +    V  + +TG +RG+GFV F   EDAQR
Sbjct:     2 NSNSTLFVRNLAFQTKQDDLTNFFSDVGPIKHAVVVTNPETGENRGYGFVTFSMLEDAQR 61

Query:   269 AINKLNGYGYDNLILRVEWATPR 291
             A  +L        ILR+++ATPR
Sbjct:    62 AAKELKNKKLHGRILRLDFATPR 84


>ZFIN|ZDB-GENE-030131-1506 [details] [associations]
            symbol:tia1 "cytotoxic granule-associated RNA
            binding protein 1" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-030131-1506 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724 HSSP:P11940
            GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748 KO:K13201
            CTD:7072 HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 OMA:WAVEPGQ
            EMBL:CT027545 EMBL:AL928954 EMBL:BC045368 IPI:IPI00511851
            RefSeq:NP_997793.1 UniGene:Dr.159520 SMR:Q7ZVY0
            Ensembl:ENSDART00000074400 GeneID:793165 KEGG:dre:793165
            InParanoid:Q7ZVY0 NextBio:20931339 Uniprot:Q7ZVY0
        Length = 386

 Score = 147 (56.8 bits), Expect = 6.9e-08, P = 6.9e-08
 Identities = 33/91 (36%), Positives = 48/91 (52%)

Query:   201 TGTDMRRRNDENS--VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFV 258
             T    ++++  N   V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV
Sbjct:    83 TSPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFV 142

Query:   259 NFVNKEDAQRAINKLNGYGYDNLILRVEWAT 289
             +F NK DA+ AI ++ G       +R  WAT
Sbjct:   143 SFFNKWDAENAIQQMGGQWLGGRQIRTNWAT 173


>UNIPROTKB|Q1JQ73 [details] [associations]
            symbol:elavl1-a "ELAV-like protein 1-A" species:8355
            "Xenopus laevis" [GO:0003730 "mRNA 3'-UTR binding" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
            "cell cortex" evidence=IDA] [GO:0007369 "gastrulation"
            evidence=IMP] [GO:0008266 "poly(U) RNA binding" evidence=IDA]
            [GO:0008298 "intracellular mRNA localization" evidence=IMP]
            [GO:0030529 "ribonucleoprotein complex" evidence=IDA;IPI]
            [GO:0031440 "regulation of mRNA 3'-end processing" evidence=IC]
            [GO:0048255 "mRNA stabilization" evidence=IC;IGI] [GO:0051259
            "protein oligomerization" evidence=IDA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005938 GO:GO:0005634 GO:GO:0008266 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0030529
            GO:GO:0008298 GO:GO:0007369 HOVERGEN:HBG002295 TIGRFAMs:TIGR01661
            KO:K13208 EMBL:U17596 EMBL:BC116459 PIR:I51675
            RefSeq:NP_001084078.1 UniGene:Xl.49136 ProteinModelPortal:Q1JQ73
            SMR:Q1JQ73 MINT:MINT-274235 PRIDE:Q1JQ73 GeneID:399292
            KEGG:xla:399292 CTD:399292 Xenbase:XB-GENE-6254178 GO:GO:0031440
            Uniprot:Q1JQ73
        Length = 337

 Score = 145 (56.1 bits), Expect = 8.8e-08, P = 8.8e-08
 Identities = 33/78 (42%), Positives = 45/78 (57%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL +D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N E+A  AI  LNG
Sbjct:   259 VYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 318

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   +  L+V + T +++
Sbjct:   319 YRLGDKTLQVSFKTSKSH 336

 Score = 119 (46.9 bits), Expect = 9.6e-05, P = 9.6e-05
 Identities = 26/88 (29%), Positives = 46/88 (52%)

Query:   193 GMRAGAERTGTDMRRRNDEN----SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQK 248
             G+R  ++       R + E+    ++ ++ L     + D+ ++F PFG +    V VDQ 
Sbjct:    94 GLRLQSKTIKVSFARPSSESIKDANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQA 153

Query:   249 TGISRGFGFVNFVNKEDAQRAINKLNGY 276
             TG+SRG  F+ F  + +A+ AI   NG+
Sbjct:   154 TGLSRGVAFIRFDKRSEAEEAIASFNGH 181


>UNIPROTKB|C0H859 [details] [associations]
            symbol:ncbp2 "Nuclear cap-binding protein subunit 2"
            species:8030 "Salmo salar" [GO:0000340 "RNA 7-methylguanosine cap
            binding" evidence=ISS] [GO:0006408 "snRNA export from nucleus"
            evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS] [GO:0045292
            "mRNA cis splicing, via spliceosome" evidence=ISS] [GO:0046833
            "positive regulation of RNA export from nucleus" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR027157
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0031047 GO:GO:0000340 GO:GO:0051028
            GO:GO:0006370 GO:GO:0045292 PANTHER:PTHR18847 GO:GO:0046833
            GO:GO:0006408 EMBL:BT043732 EMBL:BT058515 EMBL:BT060223
            UniGene:Ssa.8109 ProteinModelPortal:C0H859 Uniprot:C0H859
        Length = 155

 Score = 126 (49.4 bits), Expect = 9.1e-08, P = 9.1e-08
 Identities = 27/76 (35%), Positives = 43/76 (56%)

Query:   212 NSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAIN 271
             N++ V NLS  T E  + ELF   G V R+ + +D+    + GF FV +  + DA+ A+ 
Sbjct:    39 NTLYVGNLSFYTTEEQVYELFSKSGDVKRIIIGLDKVKKTACGFCFVEYYTRTDAENAMR 98

Query:   272 KLNGYGYDNLILRVEW 287
              +NG   D+ I+R +W
Sbjct:    99 FVNGTRLDDRIIRTDW 114


>UNIPROTKB|C1BY64 [details] [associations]
            symbol:ncbp2 "Nuclear cap-binding protein subunit 2"
            species:8010 "Esox lucius" [GO:0000340 "RNA 7-methylguanosine cap
            binding" evidence=ISS] [GO:0006408 "snRNA export from nucleus"
            evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS] [GO:0045292
            "mRNA cis splicing, via spliceosome" evidence=ISS] [GO:0046833
            "positive regulation of RNA export from nucleus" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR027157
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0031047 GO:GO:0000340 GO:GO:0051028
            GO:GO:0006370 GO:GO:0045292 PANTHER:PTHR18847 GO:GO:0046833
            GO:GO:0006408 EMBL:BT079543 ProteinModelPortal:C1BY64
            Uniprot:C1BY64
        Length = 155

 Score = 126 (49.4 bits), Expect = 9.1e-08, P = 9.1e-08
 Identities = 27/76 (35%), Positives = 43/76 (56%)

Query:   212 NSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAIN 271
             N++ V NLS  T E  + ELF   G V R+ + +D+    + GF FV +  + DA+ A+ 
Sbjct:    39 NTLYVGNLSFYTTEEQVYELFSKSGDVKRIIIGLDKVKKTACGFCFVEYYTRADAENAMR 98

Query:   272 KLNGYGYDNLILRVEW 287
              +NG   D+ I+R +W
Sbjct:    99 FVNGTRLDDRIIRTDW 114


>UNIPROTKB|Q5U259 [details] [associations]
            symbol:elavl1-b "ELAV-like protein 1-B" species:8355
            "Xenopus laevis" [GO:0003730 "mRNA 3'-UTR binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007369
            "gastrulation" evidence=ISS] [GO:0008266 "poly(U) RNA binding"
            evidence=ISS] [GO:0008298 "intracellular mRNA localization"
            evidence=IMP] [GO:0030529 "ribonucleoprotein complex" evidence=IPI]
            [GO:0048255 "mRNA stabilization" evidence=ISS] [GO:0051259 "protein
            oligomerization" evidence=ISS] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005938 GO:GO:0005634 GO:GO:0008266 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0030529
            GO:GO:0008298 GO:GO:0007369 HOVERGEN:HBG002295 KO:K13088
            TIGRFAMs:TIGR01661 EMBL:BC086269 RefSeq:NP_001088628.1
            UniGene:Xl.22886 ProteinModelPortal:Q5U259 SMR:Q5U259 PRIDE:Q5U259
            GeneID:495680 KEGG:xla:495680 CTD:495680 Xenbase:XB-GENE-865489
            Uniprot:Q5U259
        Length = 326

 Score = 144 (55.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 32/78 (41%), Positives = 45/78 (57%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             + NL +D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N E+A  AI  LNG
Sbjct:   248 IYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   +  L+V + T +++
Sbjct:   308 YRLGDKTLQVSFKTSKSH 325

 Score = 132 (51.5 bits), Expect = 2.8e-06, P = 2.8e-06
 Identities = 28/75 (37%), Positives = 43/75 (57%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V  L ++  + +L  LF   G V    +  D+  G S G+GFVN++N +DA+RAIN LNG
Sbjct:    24 VNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLNG 83

Query:   276 YGYDNLILRVEWATP 290
                 +  ++V +A P
Sbjct:    84 LRLQSKTIKVSFARP 98

 Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
 Identities = 24/67 (35%), Positives = 38/67 (56%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + ++ L     + D+ ++F PFG +    V VDQ TG+SRG  F+ F  + +A+ A
Sbjct:   105 DAN-LYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEA 163

Query:   270 INKLNGY 276
             I   NG+
Sbjct:   164 IASFNGH 170


>UNIPROTKB|Q800W4 [details] [associations]
            symbol:TIA1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0017091 "AU-rich element binding" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0042036 "negative regulation of cytokine biosynthetic process"
            evidence=IEA] [GO:0048024 "regulation of mRNA splicing, via
            spliceosome" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005737 GO:GO:0017148 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 GO:GO:0042036 GO:GO:0048024 eggNOG:COG0724
            HSSP:P11940 GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748
            KO:K13201 CTD:7072 HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 OMA:TSAPWMG
            UniGene:Gga.12064 UniGene:Gga.8269 EMBL:AADN02059907
            EMBL:AADN02059908 EMBL:AADN02059909 EMBL:AY189903 IPI:IPI00577572
            RefSeq:NP_001244132.1 SMR:Q800W4 STRING:Q800W4
            Ensembl:ENSGALT00000022506 GeneID:771327 KEGG:gga:771327
            InParanoid:Q800W4 NextBio:20921528 Uniprot:Q800W4
        Length = 372

 Score = 145 (56.1 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 31/76 (40%), Positives = 42/76 (55%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F NK DA+ AI ++
Sbjct:    97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156

Query:   274 NGYGYDNLILRVEWAT 289
              G       +R  WAT
Sbjct:   157 GGQWLGGRQIRTNWAT 172


>RGD|1305742 [details] [associations]
            symbol:Tia1 "TIA1 cytotoxic granule-associated RNA binding
            protein" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0010494 "cytoplasmic
            stress granule" evidence=IEA;ISO] [GO:0017091 "AU-rich element
            binding" evidence=IEA;ISO] [GO:0017148 "negative regulation of
            translation" evidence=IEA;ISO] [GO:0042036 "negative regulation of
            cytokine biosynthetic process" evidence=IEA;ISO] [GO:0048024
            "regulation of mRNA splicing, via spliceosome" evidence=IEA;ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1305742 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:CH473957 eggNOG:COG0724
            GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748 KO:K13201
            CTD:7072 HOVERGEN:HBG105006 EMBL:BC087064 IPI:IPI00563419
            RefSeq:NP_001012096.1 UniGene:Rn.198158 SMR:Q5PQR7 STRING:Q5PQR7
            Ensembl:ENSRNOT00000023103 GeneID:312510 KEGG:rno:312510
            UCSC:RGD:1305742 NextBio:664964 Genevestigator:Q5PQR7
            Uniprot:Q5PQR7
        Length = 375

 Score = 145 (56.1 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 31/76 (40%), Positives = 42/76 (55%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F NK DA+ AI ++
Sbjct:    97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156

Query:   274 NGYGYDNLILRVEWAT 289
              G       +R  WAT
Sbjct:   157 GGQWLGGRQIRTNWAT 172


>ZFIN|ZDB-GENE-990415-245 [details] [associations]
            symbol:elavl1 "ELAV (embryonic lethal, abnormal
            vision, Drosophila)-like 1 (Hu antigen R)" species:7955 "Danio
            rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-990415-245 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 EMBL:BX649372 IPI:IPI00817195
            PRIDE:F1QM02 Ensembl:ENSDART00000146123 ArrayExpress:F1QM02
            Bgee:F1QM02 Uniprot:F1QM02
        Length = 340

 Score = 144 (55.7 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 32/78 (41%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             + NL +D  E  L ++F PFGAV+ V V  D  T   +GFGFV   + E+A  AI  LNG
Sbjct:   262 IYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTHYEEAAMAIASLNG 321

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + IL+V + T +++
Sbjct:   322 YRLGDKILQVSFKTSKSH 339

 Score = 129 (50.5 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 27/85 (31%), Positives = 48/85 (56%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             + + ++ V  L ++  + +L  LF   G V    +  D+  G S G+GFVN++N  DA+R
Sbjct:    31 DSKTNLIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNPNDAER 90

Query:   269 AINKLNGYGYDNLILRVEWATPRTN 293
             AI+ LNG    +  ++V +A P ++
Sbjct:    91 AISTLNGLRLQSKTIKVSYARPSSD 115


>ZFIN|ZDB-GENE-040704-9 [details] [associations]
            symbol:elavl2 "ELAV (embryonic lethal, abnormal
            vision, Drosophila)-like 2 (Hu antigen B)" species:7955 "Danio
            rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-040704-9 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OrthoDB:EOG4JHCFV EMBL:AL954145
            IPI:IPI00482002 UniGene:Dr.84858 SMR:Q1MT19
            Ensembl:ENSDART00000139420 InParanoid:Q1MT19 Uniprot:Q1MT19
        Length = 388

 Score = 145 (56.1 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL+ D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   309 VYNLAPDADENVLWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAIASLNG 368

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T +T+
Sbjct:   369 YRLGDRVLQVSFKTNKTH 386

 Score = 126 (49.4 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 26/82 (31%), Positives = 46/82 (56%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             + + ++ V  L ++  + +L  LF   G +    +  D+ TG S G+GFVN++  +DA++
Sbjct:    65 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYMEPKDAEK 124

Query:   269 AINKLNGYGYDNLILRVEWATP 290
             AIN LNG       ++V +A P
Sbjct:   125 AINTLNGLRLQTKTIKVSYARP 146

 Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
 Identities = 26/66 (39%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  FG +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   153 DAN-LYVSGLPKTMTQKELEQLFSQFGRIITSRILVDQVTGVSRGVGFIRFDRRVEAEEA 211

Query:   270 INKLNG 275
             I  LNG
Sbjct:   212 IKGLNG 217


>SGD|S000000416 [details] [associations]
            symbol:NGR1 "RNA binding protein that negatively regulates
            growth rate" species:4932 "Saccharomyces cerevisiae" [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IDA] [GO:0007005 "mitochondrion organization"
            evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0061158 "3'-UTR-mediated
            mRNA destabilization" evidence=IMP;IDA] [GO:0003729 "mRNA binding"
            evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing body"
            evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 SGD:S000000416 GO:GO:0048471 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 EMBL:BK006936 GO:GO:0000932
            GO:GO:0007005 GO:GO:0010494 eggNOG:COG0724 OrthoDB:EOG44BFB8
            RefSeq:NP_009771.3 GeneID:852513 KEGG:sce:YBR212W
            GeneTree:ENSGT00510000047100 EMBL:Z14097 EMBL:Z36081 PIR:S46086
            RefSeq:NP_009775.3 ProteinModelPortal:P32831 SMR:P32831
            DIP:DIP-5160N IntAct:P32831 MINT:MINT-513097 STRING:P32831
            PaxDb:P32831 PeptideAtlas:P32831 EnsemblFungi:YBR212W GeneID:852517
            KEGG:sce:YBR216C CYGD:YBR212w OMA:RFANETE NextBio:971535
            Genevestigator:P32831 GermOnline:YBR212W GO:GO:0061158
            Uniprot:P32831
        Length = 672

 Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
 Identities = 36/84 (42%), Positives = 51/84 (60%)

Query:   211 ENSVRVTNLSEDTREPDLLELFRP-FGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             E S+ V +LS    E DLL LF+  F +V  V V  D  TG SR FGFV F ++++ +RA
Sbjct:   191 EFSLFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRA 250

Query:   270 INKLNGYGYDNLILRVEWATPRTN 293
             + +++G  +    LRV +ATPR N
Sbjct:   251 LIEMSGKWFQGRALRVAYATPRNN 274


>UNIPROTKB|E2R228 [details] [associations]
            symbol:E2R228 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 EMBL:AAEX03026350
            Ensembl:ENSCAFT00000025375 OMA:SDVEYRC Uniprot:E2R228
        Length = 149

 Score = 124 (48.7 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 29/80 (36%), Positives = 44/80 (55%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             ++E  + +  L+ +T E  L + F  FG +S V V  D++T  SRGF F+ F N E A  
Sbjct:     3 SEEGMLFLGGLNFNTNEQALEDHFSSFGPISEVVVVKDRETQRSRGFCFITFTNPEHASD 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+  +NG   D   +RV+ A
Sbjct:    63 AMRPMNGKSLDGRQIRVDHA 82


>UNIPROTKB|E7ETJ9 [details] [associations]
            symbol:TIAL1 "Nucleolysin TIAR" species:9606 "Homo sapiens"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC012468 HGNC:HGNC:11804
            ChiTaRS:TIAL1 IPI:IPI00647436 ProteinModelPortal:E7ETJ9 SMR:E7ETJ9
            Ensembl:ENST00000412524 ArrayExpress:E7ETJ9 Bgee:E7ETJ9
            Uniprot:E7ETJ9
        Length = 132

 Score = 124 (48.7 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 27/62 (43%), Positives = 36/62 (58%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F NK DA+ AI  +
Sbjct:    60 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 119

Query:   274 NG 275
              G
Sbjct:   120 GG 121


>UNIPROTKB|Q60A61 [details] [associations]
            symbol:MCA1010 "RNA-binding protein" species:243233
            "Methylococcus capsulatus str. Bath" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AE017282
            GenomeReviews:AE017282_GR HOGENOM:HOG000276232 RefSeq:YP_113486.1
            ProteinModelPortal:Q60A61 GeneID:3102652 KEGG:mca:MCA1010
            PATRIC:22605822 OMA:LAFHSTE Uniprot:Q60A61
        Length = 95

 Score = 124 (48.7 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 31/75 (41%), Positives = 39/75 (52%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL+    + DL   F  +G V    V +D+ TG SRGFGFV   + ++AQ AI  LNG
Sbjct:     7 VGNLNYRVGDADLERTFAAYGTVKSAQVVMDRATGRSRGFGFVEMGSDQEAQAAIAGLNG 66

Query:   276 YGYDNLILRVEWATP 290
                D   L V  A P
Sbjct:    67 KEMDGRNLMVNEARP 81


>TAIR|locus:2172144 [details] [associations]
            symbol:AT5G54580 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] [GO:0005739
            "mitochondrion" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AB016879 HOGENOM:HOG000276232
            HSSP:Q61474 UniGene:At.52694 EMBL:AY072101 EMBL:AY096589
            EMBL:AY085234 IPI:IPI00521049 RefSeq:NP_200269.1 UniGene:At.20805
            ProteinModelPortal:Q9FIU6 SMR:Q9FIU6 IntAct:Q9FIU6 PaxDb:Q9FIU6
            PRIDE:Q9FIU6 EnsemblPlants:AT5G54580.1 GeneID:835546
            KEGG:ath:AT5G54580 TAIR:At5g54580 eggNOG:NOG324885
            InParanoid:Q9FIU6 OMA:IKGMDGK PhylomeDB:Q9FIU6
            ProtClustDB:CLSN2696829 ArrayExpress:Q9FIU6 Genevestigator:Q9FIU6
            Uniprot:Q9FIU6
        Length = 156

 Score = 124 (48.7 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 27/76 (35%), Positives = 41/76 (53%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V+ LS+ T    L   F  FG V+   V  D+ +G S+GFGFV +   ED+ + I  ++G
Sbjct:    60 VSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGIAGMDG 119

Query:   276 YGYDNLILRVEWATPR 291
                D  ++  E+A PR
Sbjct:   120 KFLDGWVIFAEYARPR 135


>WB|WBGene00015943 [details] [associations]
            symbol:tiar-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0002009
            "morphogenesis of an epithelium" evidence=IMP] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0010171 "body morphogenesis"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0009792
            GO:GO:0002009 GO:GO:0040007 GO:GO:0002119 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0010171 GO:GO:0040011 GO:GO:0000003
            GO:GO:0003676 EMBL:FO080599 HSSP:P11940
            GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748 KO:K13201
            GeneID:173967 KEGG:cel:CELE_C18A3.5 UCSC:C18A3.5f.1 CTD:173967
            NextBio:881893 RefSeq:NP_495121.1 ProteinModelPortal:Q95QV8
            SMR:Q95QV8 IntAct:Q95QV8 STRING:Q95QV8 PRIDE:Q95QV8
            EnsemblMetazoa:C18A3.5a WormBase:C18A3.5a InParanoid:Q95QV8
            OMA:WAVEPGQ ArrayExpress:Q95QV8 Uniprot:Q95QV8
        Length = 408

 Score = 144 (55.7 bits), Expect = 1.7e-07, P = 1.7e-07
 Identities = 31/76 (40%), Positives = 44/76 (57%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +     L E F+PFG VS   V  D  T  S+G+GFV++  +E+A+RAI ++
Sbjct:   137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196

Query:   274 NGYGYDNLILRVEWAT 289
             NG       +R  WAT
Sbjct:   197 NGQWLGRRTIRTNWAT 212


>ZFIN|ZDB-GENE-980526-76 [details] [associations]
            symbol:elavl3 "ELAV (embryonic lethal, abnormal
            vision, Drosophila)-like 3 (Hu antigen C)" species:7955 "Danio
            rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-980526-76 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 HSSP:P19339 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:ARRYTGP OrthoDB:EOG43R3N0
            EMBL:CR385086 EMBL:BC065343 IPI:IPI00512421 UniGene:Dr.75060
            SMR:Q6P105 STRING:Q6P105 Ensembl:ENSDART00000028610
            InParanoid:Q6P105 Uniprot:Q6P105
        Length = 359

 Score = 143 (55.4 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 33/76 (43%), Positives = 44/76 (57%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS +  E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   280 VYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNG 339

Query:   276 YGYDNLILRVEWATPR 291
             Y   + +L+V + T +
Sbjct:   340 YRLGDRVLQVSFKTSK 355

 Score = 123 (48.4 bits), Expect = 3.8e-05, P = 3.8e-05
 Identities = 26/82 (31%), Positives = 44/82 (53%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             + + ++ V  L ++  + +   LF   G +    +  D+ TG S G+GFVN+V+  DA +
Sbjct:    35 DSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADK 94

Query:   269 AINKLNGYGYDNLILRVEWATP 290
             AIN LNG       ++V +A P
Sbjct:    95 AINTLNGLKLQTKTIKVSYARP 116

 Score = 112 (44.5 bits), Expect = 0.00069, P = 0.00069
 Identities = 26/67 (38%), Positives = 39/67 (58%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKT-GISRGFGFVNFVNKEDAQR 268
             D N + V+ L +   + D+ +LF  +G +    + VDQ T GISRG GF+ F  + +A+ 
Sbjct:   123 DAN-LYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTAGISRGVGFIRFDKRNEAEE 181

Query:   269 AINKLNG 275
             AI  LNG
Sbjct:   182 AIKGLNG 188


>UNIPROTKB|Q74DJ2 [details] [associations]
            symbol:GSU1324 "RNA-binding protein" species:243231
            "Geobacter sulfurreducens PCA" [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR HSSP:P19339
            HOGENOM:HOG000276232 RefSeq:NP_952377.1 ProteinModelPortal:Q74DJ2
            GeneID:2685944 KEGG:gsu:GSU1324 PATRIC:22025425 OMA:HMSYEAT
            ProtClustDB:CLSK828302 BioCyc:GSUL243231:GH27-1311-MONOMER
            Uniprot:Q74DJ2
        Length = 107

 Score = 123 (48.4 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 27/76 (35%), Positives = 44/76 (57%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V ++S +  E DL  LF   G V+ V++  D +TG S+G G+V  + +E+A+ AI  L+G
Sbjct:     7 VGHMSYEATEDDLRRLFSVAGTVTSVHIITDPETGRSKGCGYVRMLTEEEAKEAIETLDG 66

Query:   276 YGYDNLILRVEWATPR 291
                 N ++ V  A P+
Sbjct:    67 ALLRNRVITVSVARPQ 82


>TIGR_CMR|GSU_1324 [details] [associations]
            symbol:GSU_1324 "RNA-binding protein" species:243231
            "Geobacter sulfurreducens PCA" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AE017180 GenomeReviews:AE017180_GR HSSP:P19339
            HOGENOM:HOG000276232 RefSeq:NP_952377.1 ProteinModelPortal:Q74DJ2
            GeneID:2685944 KEGG:gsu:GSU1324 PATRIC:22025425 OMA:HMSYEAT
            ProtClustDB:CLSK828302 BioCyc:GSUL243231:GH27-1311-MONOMER
            Uniprot:Q74DJ2
        Length = 107

 Score = 123 (48.4 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 27/76 (35%), Positives = 44/76 (57%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V ++S +  E DL  LF   G V+ V++  D +TG S+G G+V  + +E+A+ AI  L+G
Sbjct:     7 VGHMSYEATEDDLRRLFSVAGTVTSVHIITDPETGRSKGCGYVRMLTEEEAKEAIETLDG 66

Query:   276 YGYDNLILRVEWATPR 291
                 N ++ V  A P+
Sbjct:    67 ALLRNRVITVSVARPQ 82


>TAIR|locus:2077137 [details] [associations]
            symbol:AT3G46020 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL162459 eggNOG:COG0724
            HOGENOM:HOG000276232 HSSP:Q61474 EMBL:BT012586 EMBL:BT015095
            IPI:IPI00521590 RefSeq:NP_190188.1 UniGene:At.35968
            ProteinModelPortal:Q9LZT1 SMR:Q9LZT1 EnsemblPlants:AT3G46020.1
            GeneID:823745 KEGG:ath:AT3G46020 TAIR:At3g46020 InParanoid:Q9LZT1
            OMA:QIKEARL PhylomeDB:Q9LZT1 ProtClustDB:CLSN2915511
            Genevestigator:Q9LZT1 Uniprot:Q9LZT1
        Length = 102

 Score = 123 (48.4 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 26/73 (35%), Positives = 43/73 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V+ LS  T +  L +LF PFG +    +  D +T   +GFGF+ F +++DA++A+  L+G
Sbjct:    11 VSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKALKSLDG 70

Query:   276 YGYDNLILRVEWA 288
                D  ++ VE A
Sbjct:    71 KIVDGRLIFVEVA 83


>DICTYBASE|DDB_G0292698 [details] [associations]
            symbol:DDB_G0292698 "RNA-binding region RNP-1
            domain-containing protein" species:44689 "Dictyostelium discoideum"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 dictyBase:DDB_G0292698 GO:GO:0000166
            EMBL:AAFI02000194 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG297815
            RefSeq:XP_629578.1 ProteinModelPortal:Q54CU2 STRING:Q54CU2
            PRIDE:Q54CU2 EnsemblProtists:DDB0233351 GeneID:8628839
            KEGG:ddi:DDB_G0292698 InParanoid:Q54CU2 OMA:DPNTKES Uniprot:Q54CU2
        Length = 306

 Score = 141 (54.7 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 35/99 (35%), Positives = 51/99 (51%)

Query:   191 PPGMRAGAERTGTDMRR---RNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQ 247
             PP        T T       +N+ N++ V+NL+  TRE DL + F   G V    + +D 
Sbjct:    47 PPTSSESPPNTNTSSDNNVDQNNGNTLHVSNLNPRTRESDLRDTFASIGKVIDCTILLDP 106

Query:   248 KTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVE 286
              T  SRGFGFV + + ++AQ AI +L+    D   +RVE
Sbjct:   107 NTKESRGFGFVTYSSGDEAQDAIQRLDSTKIDGNTIRVE 145


>UNIPROTKB|F1NPM7 [details] [associations]
            symbol:TRA2A "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000398 "mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0000398 GeneTree:ENSGT00700000104309
            OMA:DRYEEYD EMBL:AADN02000941 EMBL:AADN02000942 IPI:IPI00590713
            Ensembl:ENSGALT00000017877 Uniprot:F1NPM7
        Length = 277

 Score = 140 (54.3 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 37/96 (38%), Positives = 53/96 (55%)

Query:   200 RTGTDMRRRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFV 258
             R  T  R   D N+ + V  LS  T E DL E+F  +G ++ V V  DQ+TG SRGF FV
Sbjct:   108 RRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLTGVNVVYDQRTGRSRGFAFV 167

Query:   259 NFVNKEDAQRAINKLNGYGYDNLILRVEWA-TPRTN 293
              F   +D++ A+   NG   D   +RV+++ T R +
Sbjct:   168 YFERIDDSKEAMEHANGMELDGRRIRVDYSITKRAH 203


>UNIPROTKB|Q6GLB5 [details] [associations]
            symbol:elavl1 "ELAV-like protein 1" species:8364 "Xenopus
            (Silurana) tropicalis" [GO:0003730 "mRNA 3'-UTR binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0005938 "cell cortex" evidence=ISS]
            [GO:0007369 "gastrulation" evidence=ISS] [GO:0008266 "poly(U) RNA
            binding" evidence=ISS] [GO:0008298 "intracellular mRNA
            localization" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
            evidence=ISS] [GO:0048255 "mRNA stabilization" evidence=ISS]
            [GO:0051259 "protein oligomerization" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005938 GO:GO:0005634 GO:GO:0008266
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
            GO:GO:0030529 GO:GO:0008298 GO:GO:0007369 eggNOG:COG0724
            HOVERGEN:HBG002295 CTD:1994 HOGENOM:HOG000231162 KO:K13088
            OrthoDB:EOG4Z8XWZ TIGRFAMs:TIGR01661 EMBL:BC074585
            RefSeq:NP_001005461.1 UniGene:Str.2596 ProteinModelPortal:Q6GLB5
            SMR:Q6GLB5 STRING:Q6GLB5 PRIDE:Q6GLB5 GeneID:448062 KEGG:xtr:448062
            Xenbase:XB-GENE-481800 InParanoid:Q6GLB5 Uniprot:Q6GLB5
        Length = 326

 Score = 141 (54.7 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 32/78 (41%), Positives = 45/78 (57%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             + NL +D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N E+A  AI  LNG
Sbjct:   248 IYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   +  L+V + T +++
Sbjct:   308 YRLGDKTLQVFFKTSKSH 325

 Score = 128 (50.1 bits), Expect = 8.2e-06, P = 8.2e-06
 Identities = 28/75 (37%), Positives = 42/75 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V  L ++  + +L  LF   G V    +  D+  G S G+GFVN++N +DA+RAIN LNG
Sbjct:    24 VNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLNG 83

Query:   276 YGYDNLILRVEWATP 290
                 +  ++V  A P
Sbjct:    84 LRLQSKTIKVSVARP 98

 Score = 121 (47.7 bits), Expect = 5.3e-05, P = 5.3e-05
 Identities = 26/88 (29%), Positives = 47/88 (53%)

Query:   193 GMRAGAERTGTDMRRRNDEN----SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQK 248
             G+R  ++     + R + E+    ++ ++ L     + D+ ++F PFG +    V VDQ 
Sbjct:    83 GLRLQSKTIKVSVARPSSESIKDANLYISGLPRTMTQKDVEDMFLPFGRIINSRVLVDQA 142

Query:   249 TGISRGFGFVNFVNKEDAQRAINKLNGY 276
             TG+SRG  F+ F  + +A+ AI   NG+
Sbjct:   143 TGLSRGVAFIRFDKRSEAEEAIASFNGH 170


>UNIPROTKB|F1PVV1 [details] [associations]
            symbol:ELAVL3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:ARRYTGP EMBL:AAEX03012413
            Ensembl:ENSCAFT00000027494 Uniprot:F1PVV1
        Length = 367

 Score = 142 (55.0 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 33/76 (43%), Positives = 43/76 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS +  E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   288 VYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNG 347

Query:   276 YGYDNLILRVEWATPR 291
             Y     +L+V + T +
Sbjct:   348 YRLGERVLQVSFKTSK 363

 Score = 121 (47.7 bits), Expect = 6.6e-05, P = 6.6e-05
 Identities = 27/89 (30%), Positives = 46/89 (51%)

Query:   202 GTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFV 261
             GT+    + + ++ V  L ++  + +   LF   G +    +  D+ TG S G+GFVN+ 
Sbjct:    29 GTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYS 88

Query:   262 NKEDAQRAINKLNGYGYDNLILRVEWATP 290
             +  DA +AIN LNG       ++V +A P
Sbjct:    89 DPNDADKAINTLNGLKLQTKTIKVSYARP 117

 Score = 113 (44.8 bits), Expect = 0.00054, P = 0.00054
 Identities = 24/66 (36%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + ++ +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   124 DAN-LYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 182

Query:   270 INKLNG 275
             I  LNG
Sbjct:   183 IKGLNG 188


>UNIPROTKB|Q14576 [details] [associations]
            symbol:ELAVL3 "ELAV-like protein 3" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007399
            "nervous system development" evidence=IEA] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0017091 "AU-rich element
            binding" evidence=IDA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0007399 GO:GO:0030154
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 eggNOG:COG0724
            HOVERGEN:HBG002295 HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            KO:K13208 EMBL:L26405 EMBL:AY036909 EMBL:AC008481 EMBL:BC014144
            EMBL:D26158 IPI:IPI00031552 IPI:IPI00140449 RefSeq:NP_001411.2
            RefSeq:NP_115657.2 UniGene:Hs.1701 ProteinModelPortal:Q14576
            SMR:Q14576 IntAct:Q14576 MINT:MINT-1471958 STRING:Q14576
            PhosphoSite:Q14576 DMDM:21264436 PaxDb:Q14576 PRIDE:Q14576
            Ensembl:ENST00000359227 Ensembl:ENST00000438662 GeneID:1995
            KEGG:hsa:1995 UCSC:uc002mrx.1 UCSC:uc002mry.1 CTD:1995
            GeneCards:GC19M011562 HGNC:HGNC:3314 HPA:CAB013066 MIM:603458
            neXtProt:NX_Q14576 PharmGKB:PA27742 InParanoid:Q14576 OMA:ARRYTGP
            PhylomeDB:Q14576 ChiTaRS:ELAVL3 GenomeRNAi:1995 NextBio:8067
            ArrayExpress:Q14576 Bgee:Q14576 CleanEx:HS_ELAVL3
            Genevestigator:Q14576 GermOnline:ENSG00000196361 Uniprot:Q14576
        Length = 367

 Score = 142 (55.0 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 33/76 (43%), Positives = 43/76 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS +  E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   288 VYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNG 347

Query:   276 YGYDNLILRVEWATPR 291
             Y     +L+V + T +
Sbjct:   348 YRLGERVLQVSFKTSK 363

 Score = 121 (47.7 bits), Expect = 6.6e-05, P = 6.6e-05
 Identities = 27/89 (30%), Positives = 46/89 (51%)

Query:   202 GTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFV 261
             GT+    + + ++ V  L ++  + +   LF   G +    +  D+ TG S G+GFVN+ 
Sbjct:    29 GTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYS 88

Query:   262 NKEDAQRAINKLNGYGYDNLILRVEWATP 290
             +  DA +AIN LNG       ++V +A P
Sbjct:    89 DPNDADKAINTLNGLKLQTKTIKVSYARP 117

 Score = 113 (44.8 bits), Expect = 0.00054, P = 0.00054
 Identities = 24/66 (36%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + ++ +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   124 DAN-LYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 182

Query:   270 INKLNG 275
             I  LNG
Sbjct:   183 IKGLNG 188


>UNIPROTKB|F1SA16 [details] [associations]
            symbol:ELAVL3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0017091 "AU-rich element binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:ARRYTGP EMBL:CU855518
            Ensembl:ENSSSCT00000014872 Uniprot:F1SA16
        Length = 367

 Score = 142 (55.0 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 33/76 (43%), Positives = 43/76 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS +  E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   288 VYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNG 347

Query:   276 YGYDNLILRVEWATPR 291
             Y     +L+V + T +
Sbjct:   348 YRLGERVLQVSFKTSK 363

 Score = 121 (47.7 bits), Expect = 6.6e-05, P = 6.6e-05
 Identities = 27/89 (30%), Positives = 46/89 (51%)

Query:   202 GTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFV 261
             GT+    + + ++ V  L ++  + +   LF   G +    +  D+ TG S G+GFVN+ 
Sbjct:    29 GTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYS 88

Query:   262 NKEDAQRAINKLNGYGYDNLILRVEWATP 290
             +  DA +AIN LNG       ++V +A P
Sbjct:    89 DPNDADKAINTLNGLKLQTKTIKVSYARP 117

 Score = 113 (44.8 bits), Expect = 0.00054, P = 0.00054
 Identities = 24/66 (36%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + ++ +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   124 DAN-LYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 182

Query:   270 INKLNG 275
             I  LNG
Sbjct:   183 IKGLNG 188


>MGI|MGI:109157 [details] [associations]
            symbol:Elavl3 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 3 (Hu antigen C)" species:10090 "Mus musculus"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=IEA] [GO:0017091
            "AU-rich element binding" evidence=ISO;IDA] [GO:0030154 "cell
            differentiation" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            MGI:MGI:109157 GO:GO:0007399 GO:GO:0030154 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0017091 eggNOG:COG0724 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 KO:K13208 CTD:1995 OMA:ARRYTGP
            ChiTaRS:ELAVL3 EMBL:U29148 EMBL:U29149 EMBL:BC052097
            IPI:IPI00122451 IPI:IPI00222990 RefSeq:NP_034617.1
            UniGene:Mm.390167 PDB:1D8Z PDB:1D9A PDB:1FNX PDBsum:1D8Z
            PDBsum:1D9A PDBsum:1FNX ProteinModelPortal:Q60900 SMR:Q60900
            STRING:Q60900 PhosphoSite:Q60900 PaxDb:Q60900 PRIDE:Q60900
            Ensembl:ENSMUST00000003501 GeneID:15571 KEGG:mmu:15571
            UCSC:uc009onl.2 UCSC:uc009onn.1 InParanoid:Q60900 OrthoDB:EOG43R3N0
            EvolutionaryTrace:Q60900 NextBio:288556 Bgee:Q60900
            Genevestigator:Q60900 GermOnline:ENSMUSG00000003410 Uniprot:Q60900
        Length = 367

 Score = 142 (55.0 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 33/76 (43%), Positives = 43/76 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS +  E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   288 VYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNG 347

Query:   276 YGYDNLILRVEWATPR 291
             Y     +L+V + T +
Sbjct:   348 YRLGERVLQVSFKTSK 363

 Score = 121 (47.7 bits), Expect = 6.6e-05, P = 6.6e-05
 Identities = 27/89 (30%), Positives = 46/89 (51%)

Query:   202 GTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFV 261
             GT+    + + ++ V  L ++  + +   LF   G +    +  D+ TG S G+GFVN+ 
Sbjct:    29 GTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYS 88

Query:   262 NKEDAQRAINKLNGYGYDNLILRVEWATP 290
             +  DA +AIN LNG       ++V +A P
Sbjct:    89 DPNDADKAINTLNGLKLQTKTIKVSYARP 117

 Score = 111 (44.1 bits), Expect = 0.00092, P = 0.00092
 Identities = 23/66 (34%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + ++ +LF  +G +    + +DQ TG+SRG GF+ F  + +A+ A
Sbjct:   124 DAN-LYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEA 182

Query:   270 INKLNG 275
             I  LNG
Sbjct:   183 IKGLNG 188


>RGD|628892 [details] [associations]
            symbol:Elavl3 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 3 (Hu antigen C)" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA;ISO]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 RGD:628892 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 HSSP:P19339 eggNOG:COG0724 EMBL:CH473993
            HOVERGEN:HBG002295 HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 KO:K13208 CTD:1995 OrthoDB:EOG43R3N0
            EMBL:AB097198 IPI:IPI00192527 RefSeq:NP_758827.1 UniGene:Rn.22586
            SMR:Q76IJ9 STRING:Q76IJ9 Ensembl:ENSRNOT00000018416 GeneID:282824
            KEGG:rno:282824 UCSC:RGD:628892 InParanoid:Q76IJ9 NextBio:624869
            Genevestigator:Q76IJ9 Uniprot:Q76IJ9
        Length = 367

 Score = 142 (55.0 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 33/76 (43%), Positives = 43/76 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS +  E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   288 VYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNG 347

Query:   276 YGYDNLILRVEWATPR 291
             Y     +L+V + T +
Sbjct:   348 YRLGERVLQVSFKTSK 363

 Score = 121 (47.7 bits), Expect = 6.6e-05, P = 6.6e-05
 Identities = 27/89 (30%), Positives = 46/89 (51%)

Query:   202 GTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFV 261
             GT+    + + ++ V  L ++  + +   LF   G +    +  D+ TG S G+GFVN+ 
Sbjct:    29 GTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYS 88

Query:   262 NKEDAQRAINKLNGYGYDNLILRVEWATP 290
             +  DA +AIN LNG       ++V +A P
Sbjct:    89 DPNDADKAINTLNGLKLQTKTIKVSYARP 117

 Score = 111 (44.1 bits), Expect = 0.00092, P = 0.00092
 Identities = 23/66 (34%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + ++ +LF  +G +    + +DQ TG+SRG GF+ F  + +A+ A
Sbjct:   124 DAN-LYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEA 182

Query:   270 INKLNG 275
             I  LNG
Sbjct:   183 IKGLNG 188


>UNIPROTKB|F1N4V6 [details] [associations]
            symbol:ELAVL3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0017091 "AU-rich element binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:ARRYTGP EMBL:DAAA02019487
            IPI:IPI00710891 Ensembl:ENSBTAT00000019169 Uniprot:F1N4V6
        Length = 368

 Score = 142 (55.0 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 33/76 (43%), Positives = 43/76 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS +  E  L +LF PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   289 VYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNG 348

Query:   276 YGYDNLILRVEWATPR 291
             Y     +L+V + T +
Sbjct:   349 YRLGERVLQVSFKTSK 364

 Score = 121 (47.7 bits), Expect = 6.6e-05, P = 6.6e-05
 Identities = 27/89 (30%), Positives = 46/89 (51%)

Query:   202 GTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFV 261
             GT+    + + ++ V  L ++  + +   LF   G +    +  D+ TG S G+GFVN+ 
Sbjct:    29 GTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYS 88

Query:   262 NKEDAQRAINKLNGYGYDNLILRVEWATP 290
             +  DA +AIN LNG       ++V +A P
Sbjct:    89 DPNDADKAINTLNGLKLQTKTIKVSYARP 117

 Score = 113 (44.8 bits), Expect = 0.00055, P = 0.00055
 Identities = 24/66 (36%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + ++ +LF  +G +    + VDQ TG+SRG GF+ F  + +A+ A
Sbjct:   124 DAN-LYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 182

Query:   270 INKLNG 275
             I  LNG
Sbjct:   183 IKGLNG 188


>UNIPROTKB|Q83CD7 [details] [associations]
            symbol:CBU_1183 "Glycine-rich RNA-binding protein"
            species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AE016828
            GenomeReviews:AE016828_GR HOGENOM:HOG000276232 OMA:KRVHIPT
            RefSeq:NP_820178.2 ProteinModelPortal:Q83CD7 PRIDE:Q83CD7
            GeneID:1209086 KEGG:cbu:CBU_1183 PATRIC:17931107
            ProtClustDB:CLSK914597 BioCyc:CBUR227377:GJ7S-1169-MONOMER
            Uniprot:Q83CD7
        Length = 117

 Score = 122 (48.0 bits), Expect = 2.5e-07, P = 2.5e-07
 Identities = 25/82 (30%), Positives = 43/82 (52%)

Query:   211 ENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAI 270
             +N + V +LS D    +L   F  +G +    + +D++TG S+GF F+ +  ++ AQ A+
Sbjct:    17 QNKIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAV 76

Query:   271 NKLNGYGYDNLILRVEWATPRT 292
             +K NG       +RV  A   T
Sbjct:    77 SKANGIDLQGRKIRVNIARENT 98


>TIGR_CMR|CBU_1183 [details] [associations]
            symbol:CBU_1183 "nucleic acid binding domain protein"
            species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] [GO:0003676 "nucleic acid
            binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AE016828
            GenomeReviews:AE016828_GR HOGENOM:HOG000276232 OMA:KRVHIPT
            RefSeq:NP_820178.2 ProteinModelPortal:Q83CD7 PRIDE:Q83CD7
            GeneID:1209086 KEGG:cbu:CBU_1183 PATRIC:17931107
            ProtClustDB:CLSK914597 BioCyc:CBUR227377:GJ7S-1169-MONOMER
            Uniprot:Q83CD7
        Length = 117

 Score = 122 (48.0 bits), Expect = 2.5e-07, P = 2.5e-07
 Identities = 25/82 (30%), Positives = 43/82 (52%)

Query:   211 ENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAI 270
             +N + V +LS D    +L   F  +G +    + +D++TG S+GF F+ +  ++ AQ A+
Sbjct:    17 QNKIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAV 76

Query:   271 NKLNGYGYDNLILRVEWATPRT 292
             +K NG       +RV  A   T
Sbjct:    77 SKANGIDLQGRKIRVNIARENT 98


>TAIR|locus:2077427 [details] [associations]
            symbol:AT3G08000 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC013483 eggNOG:COG0724
            HOGENOM:HOG000276232 HSSP:Q14103 UniGene:At.40270 UniGene:At.28103
            EMBL:BT012118 EMBL:BT012373 IPI:IPI00520412 RefSeq:NP_187457.1
            ProteinModelPortal:Q9SFB4 SMR:Q9SFB4 EnsemblPlants:AT3G08000.1
            GeneID:819991 KEGG:ath:AT3G08000 TAIR:At3g08000 InParanoid:Q9SFB4
            OMA:FCTSSSA PhylomeDB:Q9SFB4 ProtClustDB:CLSN2915579
            Genevestigator:Q9SFB4 Uniprot:Q9SFB4
        Length = 143

 Score = 122 (48.0 bits), Expect = 2.5e-07, P = 2.5e-07
 Identities = 29/76 (38%), Positives = 42/76 (55%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             +  LS    E  L + F  FG V+ V +A D+ +G SRGFGFV+F  + DA  A + ++G
Sbjct:    45 IGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDAMDG 104

Query:   276 YGYDNLILRVEWATPR 291
              G     LR+ +A  R
Sbjct:   105 KGLLGRPLRISFALER 120


>UNIPROTKB|D4A964 [details] [associations]
            symbol:Tial1 "Protein Tial1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1595845 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            IPI:IPI00949247 Ensembl:ENSRNOT00000066938 Uniprot:D4A964
        Length = 368

 Score = 141 (54.7 bits), Expect = 3.2e-07, P = 3.2e-07
 Identities = 31/76 (40%), Positives = 41/76 (53%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F NK DA+ AI  +
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:   274 NGYGYDNLILRVEWAT 289
              G       +R  WAT
Sbjct:   176 GGQWLGGRQIRTNWAT 191


>UNIPROTKB|F1LQ36 [details] [associations]
            symbol:Tial1 "Protein Tial1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007281 "germ cell
            development" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IEA] [GO:0017091 "AU-rich element binding"
            evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1595845 GO:GO:0005634 GO:GO:0000166 GO:GO:0008284
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
            GO:GO:0017145 GeneTree:ENSGT00680000099967 IPI:IPI00555194
            Ensembl:ENSRNOT00000027463 Uniprot:F1LQ36
        Length = 371

 Score = 141 (54.7 bits), Expect = 3.2e-07, P = 3.2e-07
 Identities = 31/76 (40%), Positives = 41/76 (53%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F NK DA+ AI  +
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:   274 NGYGYDNLILRVEWAT 289
              G       +R  WAT
Sbjct:   176 GGQWLGGRQIRTNWAT 191


>UNIPROTKB|Q01085 [details] [associations]
            symbol:TIAL1 "Nucleolysin TIAR" species:9606 "Homo sapiens"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006915
            "apoptotic process" evidence=IEA] [GO:0007281 "germ cell
            development" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0017091 "AU-rich element binding"
            evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
            evidence=ISS] [GO:0003723 "RNA binding" evidence=TAS] [GO:0006952
            "defense response" evidence=TAS] [GO:0005764 "lysosome"
            evidence=TAS] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=TAS] [GO:0006917 "induction of
            apoptosis" evidence=TAS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0006915 GO:GO:0006952 GO:GO:0006917 GO:GO:0000166
            GO:GO:0008284 Gene3D:3.30.70.330 GO:GO:0006357 GO:GO:0005764
            GO:GO:0003723 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
            eggNOG:COG0724 GO:GO:0017145 HOGENOM:HOG000206748 KO:K13201
            HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 EMBL:M96954 EMBL:AK290695
            EMBL:AK290984 IPI:IPI00005615 IPI:IPI00644708 PIR:A46174
            RefSeq:NP_001029097.1 RefSeq:NP_003243.1 UniGene:Hs.501203 PDB:1X4G
            PDB:2CQI PDB:2DH7 PDBsum:1X4G PDBsum:2CQI PDBsum:2DH7
            ProteinModelPortal:Q01085 SMR:Q01085 DIP:DIP-42425N IntAct:Q01085
            MINT:MINT-1203913 STRING:Q01085 PhosphoSite:Q01085 DMDM:267131
            PaxDb:Q01085 PRIDE:Q01085 Ensembl:ENST00000369093
            Ensembl:ENST00000436547 GeneID:7073 KEGG:hsa:7073 UCSC:uc001lei.1
            CTD:7073 GeneCards:GC10M121324 HGNC:HGNC:11804 MIM:603413
            neXtProt:NX_Q01085 PharmGKB:PA36513 OMA:EEVYNQS PhylomeDB:Q01085
            ChiTaRS:TIAL1 EvolutionaryTrace:Q01085 GenomeRNAi:7073
            NextBio:27661 ArrayExpress:Q01085 Bgee:Q01085 CleanEx:HS_TIAL1
            Genevestigator:Q01085 GermOnline:ENSG00000151923 Uniprot:Q01085
        Length = 375

 Score = 141 (54.7 bits), Expect = 3.3e-07, P = 3.3e-07
 Identities = 31/76 (40%), Positives = 41/76 (53%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F NK DA+ AI  +
Sbjct:    99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158

Query:   274 NGYGYDNLILRVEWAT 289
              G       +R  WAT
Sbjct:   159 GGQWLGGRQIRTNWAT 174


>UNIPROTKB|F2Z4H8 [details] [associations]
            symbol:TIAL1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0017145 "stem cell division" evidence=IEA] [GO:0017091
            "AU-rich element binding" evidence=IEA] [GO:0010494 "cytoplasmic
            stress granule" evidence=IEA] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IEA] [GO:0007281 "germ cell
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 GO:GO:0008284 Gene3D:3.30.70.330
            GO:GO:0017091 GO:GO:0007281 GO:GO:0010494 GO:GO:0017145
            GeneTree:ENSGT00680000099967 KO:K13201 CTD:7073 OMA:NGSKQLR
            EMBL:DAAA02059399 IPI:IPI00707976 RefSeq:NP_001179985.1
            UniGene:Bt.15754 ProteinModelPortal:F2Z4H8
            Ensembl:ENSBTAT00000005331 GeneID:614540 KEGG:bta:614540
            NextBio:20899153 Uniprot:F2Z4H8
        Length = 380

 Score = 141 (54.7 bits), Expect = 3.4e-07, P = 3.4e-07
 Identities = 31/76 (40%), Positives = 41/76 (53%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F NK DA+ AI  +
Sbjct:    99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158

Query:   274 NGYGYDNLILRVEWAT 289
              G       +R  WAT
Sbjct:   159 GGQWLGGRQIRTNWAT 174


>UNIPROTKB|F1NY49 [details] [associations]
            symbol:374274 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007281 "germ cell
            development" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IEA] [GO:0017091 "AU-rich element binding"
            evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0008284
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0010494 GO:GO:0017145
            GeneTree:ENSGT00680000099967 OMA:EEVYNQS EMBL:AADN02030982
            IPI:IPI00575679 Ensembl:ENSGALT00000015349 ArrayExpress:F1NY49
            Uniprot:F1NY49
        Length = 388

 Score = 141 (54.7 bits), Expect = 3.5e-07, P = 3.5e-07
 Identities = 31/76 (40%), Positives = 41/76 (53%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F NK DA+ AI  +
Sbjct:   115 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 174

Query:   274 NGYGYDNLILRVEWAT 289
              G       +R  WAT
Sbjct:   175 GGQWLGGRQIRTNWAT 190


>UNIPROTKB|F1NS94 [details] [associations]
            symbol:374274 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007281 "germ cell
            development" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IEA] [GO:0017091 "AU-rich element binding"
            evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0008284
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0010494 GO:GO:0017145
            GeneTree:ENSGT00680000099967 OMA:EEVYNQS EMBL:AADN02030982
            IPI:IPI00681845 Ensembl:ENSGALT00000029737 ArrayExpress:F1NS94
            Uniprot:F1NS94
        Length = 389

 Score = 141 (54.7 bits), Expect = 3.5e-07, P = 3.5e-07
 Identities = 31/76 (40%), Positives = 41/76 (53%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F NK DA+ AI  +
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:   274 NGYGYDNLILRVEWAT 289
              G       +R  WAT
Sbjct:   176 GGQWLGGRQIRTNWAT 191


>UNIPROTKB|E2RA41 [details] [associations]
            symbol:TIAL1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0017145 "stem cell division" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0010494
            "cytoplasmic stress granule" evidence=IEA] [GO:0008284 "positive
            regulation of cell proliferation" evidence=IEA] [GO:0007281 "germ
            cell development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 GO:GO:0008284 Gene3D:3.30.70.330
            GO:GO:0017091 GO:GO:0007281 GO:GO:0010494 GO:GO:0017145
            GeneTree:ENSGT00680000099967 KO:K13201 CTD:7073 OMA:EEVYNQS
            EMBL:AAEX03015584 EMBL:AAEX03015585 RefSeq:XP_852319.1
            ProteinModelPortal:E2RA41 SMR:E2RA41 Ensembl:ENSCAFT00000019370
            GeneID:477841 KEGG:cfa:477841 NextBio:20853261 Uniprot:E2RA41
        Length = 392

 Score = 141 (54.7 bits), Expect = 3.6e-07, P = 3.6e-07
 Identities = 31/76 (40%), Positives = 41/76 (53%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F NK DA+ AI  +
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:   274 NGYGYDNLILRVEWAT 289
              G       +R  WAT
Sbjct:   176 GGQWLGGRQIRTNWAT 191


>UNIPROTKB|F2Z5F9 [details] [associations]
            symbol:LOC100736782 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00680000099967 KO:K13201 CTD:7073 OMA:EEVYNQS
            EMBL:CT826370 EMBL:CT867965 RefSeq:XP_003133244.1 UniGene:Ssc.56271
            ProteinModelPortal:F2Z5F9 SMR:F2Z5F9 Ensembl:ENSSSCT00000011686
            GeneID:100158186 KEGG:ssc:100158186 Uniprot:F2Z5F9
        Length = 392

 Score = 141 (54.7 bits), Expect = 3.6e-07, P = 3.6e-07
 Identities = 31/76 (40%), Positives = 41/76 (53%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F NK DA+ AI  +
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:   274 NGYGYDNLILRVEWAT 289
              G       +R  WAT
Sbjct:   176 GGQWLGGRQIRTNWAT 191


>MGI|MGI:107913 [details] [associations]
            symbol:Tial1 "Tia1 cytotoxic granule-associated RNA binding
            protein-like 1" species:10090 "Mus musculus" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0006915 "apoptotic process" evidence=IEA]
            [GO:0007281 "germ cell development" evidence=IMP] [GO:0008284
            "positive regulation of cell proliferation" evidence=IMP]
            [GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0017091
            "AU-rich element binding" evidence=IDA] [GO:0017145 "stem cell
            division" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:107913
            GO:GO:0005634 GO:GO:0006915 GO:GO:0000166 GO:GO:0008284
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
            eggNOG:COG0724 GO:GO:0017145 HOGENOM:HOG000206748 KO:K13201
            HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 CTD:7073 ChiTaRS:TIAL1
            EMBL:U55861 IPI:IPI00108085 PIR:S72436 RefSeq:NP_033409.1
            UniGene:Mm.242072 ProteinModelPortal:P70318 SMR:P70318
            IntAct:P70318 STRING:P70318 PhosphoSite:P70318 PaxDb:P70318
            PRIDE:P70318 Ensembl:ENSMUST00000106226 GeneID:21843 KEGG:mmu:21843
            InParanoid:P70318 OMA:NGSKQLR NextBio:301310 Bgee:P70318
            Genevestigator:P70318 GermOnline:ENSMUSG00000030846 Uniprot:P70318
        Length = 392

 Score = 141 (54.7 bits), Expect = 3.6e-07, P = 3.6e-07
 Identities = 31/76 (40%), Positives = 41/76 (53%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F NK DA+ AI  +
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:   274 NGYGYDNLILRVEWAT 289
              G       +R  WAT
Sbjct:   176 GGQWLGGRQIRTNWAT 191


>RGD|1595845 [details] [associations]
            symbol:Tial1 "Tia1 cytotoxic granule-associated RNA binding
            protein-like 1" species:10116 "Rattus norvegicus" [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0007281 "germ cell development" evidence=ISO] [GO:0008284
            "positive regulation of cell proliferation" evidence=ISO]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0017091
            "AU-rich element binding" evidence=ISO] [GO:0017145 "stem cell
            division" evidence=ISO] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1595845
            GO:GO:0005634 GO:GO:0000166 GO:GO:0008284 EMBL:CH473956
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
            eggNOG:COG0724 GO:GO:0017145 HOGENOM:HOG000206748 KO:K13201
            HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 CTD:7073 IPI:IPI00555194
            EMBL:BC091409 RefSeq:NP_001013211.1 UniGene:Rn.162475 SMR:Q5BJN3
            STRING:Q5BJN3 GeneID:361655 KEGG:rno:361655 UCSC:RGD:1595845
            InParanoid:Q5BJN3 NextBio:677112 Genevestigator:Q5BJN3
            Uniprot:Q5BJN3
        Length = 392

 Score = 141 (54.7 bits), Expect = 3.6e-07, P = 3.6e-07
 Identities = 31/76 (40%), Positives = 41/76 (53%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F NK DA+ AI  +
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:   274 NGYGYDNLILRVEWAT 289
              G       +R  WAT
Sbjct:   176 GGQWLGGRQIRTNWAT 191


>UNIPROTKB|B1AM48 [details] [associations]
            symbol:ELAVL2 "ELAV-like protein 2" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 EMBL:AL161628 EMBL:AL445623 UniGene:Hs.166109
            HGNC:HGNC:3313 OrthoDB:EOG4JHCFV IPI:IPI00184721 SMR:B1AM48
            Ensembl:ENST00000440102 Uniprot:B1AM48
        Length = 189

 Score = 130 (50.8 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 28/88 (31%), Positives = 47/88 (53%)

Query:   204 DMRRRNDENSVRVTN-LSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVN 262
             D     D  +  + N L ++  + +L  LF   G +    +  D+ TG S G+GFVN+++
Sbjct:    30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89

Query:   263 KEDAQRAINKLNGYGYDNLILRVEWATP 290
              +DA++AIN LNG       ++V +A P
Sbjct:    90 PKDAEKAINTLNGLRLQTKTIKVSYARP 117

 Score = 116 (45.9 bits), Expect = 3.7e-05, P = 3.7e-05
 Identities = 26/66 (39%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TGISRG GF+ F  + +A+ A
Sbjct:   124 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEA 182

Query:   270 INKLNG 275
             I  LNG
Sbjct:   183 IKGLNG 188


>FB|FBgn0264270 [details] [associations]
            symbol:Sxl "Sex lethal" species:7227 "Drosophila
            melanogaster" [GO:0048024 "regulation of mRNA splicing, via
            spliceosome" evidence=NAS;TAS] [GO:0019099 "female germ-line sex
            determination" evidence=TAS] [GO:0007549 "dosage compensation"
            evidence=NAS;TAS] [GO:0019101 "female somatic sex determination"
            evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0008187 "poly-pyrimidine tract binding" evidence=IDA]
            [GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
            evidence=TAS] [GO:0007541 "sex determination, primary response to
            X:A ratio" evidence=NAS;TAS] [GO:0048477 "oogenesis" evidence=TAS]
            [GO:0030237 "female sex determination" evidence=NAS] [GO:0007131
            "reciprocal meiotic recombination" evidence=TAS] [GO:0018993
            "somatic sex determination" evidence=NAS;TAS] [GO:0003729 "mRNA
            binding" evidence=ISS;TAS] [GO:0007530 "sex determination"
            evidence=NAS;TAS] [GO:0008266 "poly(U) RNA binding" evidence=IDA]
            [GO:0007281 "germ cell development" evidence=TAS] [GO:0007548 "sex
            differentiation" evidence=NAS;TAS] [GO:0017148 "negative regulation
            of translation" evidence=IMP;IDA;NAS;TAS] [GO:0048027 "mRNA 5'-UTR
            binding" evidence=IDA;TAS] [GO:0000900 "translation repressor
            activity, nucleic acid binding" evidence=TAS] [GO:0000380
            "alternative mRNA splicing, via spliceosome" evidence=TAS]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=TAS] [GO:0003730 "mRNA 3'-UTR
            binding" evidence=IDA] [GO:0007224 "smoothened signaling pathway"
            evidence=IDA] [GO:0008083 "growth factor activity" evidence=IDA]
            [GO:0007446 "imaginal disc growth" evidence=IMP] [GO:0009994
            "oocyte differentiation" evidence=IDA] [GO:0043234 "protein
            complex" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006546
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0043234 GO:GO:0008266
            GO:GO:0006355 GO:GO:0000166 EMBL:AE014298 Gene3D:3.30.70.330
            GO:GO:0006351 GO:GO:0048027 GO:GO:0003730 GO:GO:0007281
            GO:GO:0008083 GO:GO:0007548 GO:GO:0007224 GO:GO:0007131
            GO:GO:0009994 GO:GO:0000900 GO:GO:0048025 GO:GO:0019099
            GO:GO:0000380 GO:GO:0007541 GO:GO:0007446 GO:GO:0007549
            GO:GO:0019101 GeneTree:ENSGT00560000077064 EMBL:M23635 EMBL:M23636
            EMBL:M59447 EMBL:M59448 EMBL:BT003583 EMBL:BT099922 EMBL:BT100240
            EMBL:BT120392 EMBL:S88324 EMBL:D84425 PIR:A31639 PIR:A39725
            RefSeq:NP_001027062.1 RefSeq:NP_001027063.1 RefSeq:NP_001027064.1
            RefSeq:NP_001027065.1 RefSeq:NP_001027066.1 RefSeq:NP_001162686.1
            RefSeq:NP_001162687.1 RefSeq:NP_001162688.1 RefSeq:NP_001162689.1
            RefSeq:NP_001162690.1 RefSeq:NP_001162691.1 RefSeq:NP_001245559.1
            RefSeq:NP_524791.3 RefSeq:NP_727160.2 RefSeq:NP_727161.2
            RefSeq:NP_727162.2 RefSeq:NP_727163.2 RefSeq:NP_727164.2
            RefSeq:NP_727165.2 RefSeq:NP_727166.2 RefSeq:NP_727167.2
            RefSeq:NP_727168.1 UniGene:Dm.4502 PDB:1B7F PDB:1SXL PDB:2SXL
            PDB:3SXL PDBsum:1B7F PDBsum:1SXL PDBsum:2SXL PDBsum:3SXL
            ProteinModelPortal:P19339 SMR:P19339 IntAct:P19339 MINT:MINT-276991
            STRING:P19339 PaxDb:P19339 PRIDE:P19339 EnsemblMetazoa:FBtr0331255
            EnsemblMetazoa:FBtr0331262 EnsemblMetazoa:FBtr0331268
            GeneID:3772180 KEGG:dme:Dmel_CG18350 CTD:3772180
            FlyBase:FBgn0003659 eggNOG:NOG249299 InParanoid:P19339 OMA:HRDGAME
            OrthoDB:EOG4F4QSS EvolutionaryTrace:P19339 NextBio:852740
            Bgee:P19339 GermOnline:CG18350 TIGRFAMs:TIGR01659 Uniprot:P19339
        Length = 354

 Score = 140 (54.3 bits), Expect = 3.9e-07, P = 3.9e-07
 Identities = 35/94 (37%), Positives = 51/94 (54%)

Query:   197 GAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFG 256
             G++    D R  N  N + V  L +D  + +L  LFR  G ++   +  D KTG S G+ 
Sbjct:   112 GSDDLMNDPRASNT-NLI-VNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYA 169

Query:   257 FVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 290
             FV+F ++ D+QRAI  LNG    N  L+V +A P
Sbjct:   170 FVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 203


>ZFIN|ZDB-GENE-040426-1547 [details] [associations]
            symbol:tial1 "TIA1 cytotoxic granule-associated
            RNA binding protein-like 1" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-040426-1547 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GeneTree:ENSGT00680000099967 EMBL:BX530079
            IPI:IPI00920337 ProteinModelPortal:E9QJJ0
            Ensembl:ENSDART00000135321 ArrayExpress:E9QJJ0 Bgee:E9QJJ0
            Uniprot:E9QJJ0
        Length = 389

 Score = 140 (54.3 bits), Expect = 4.7e-07, P = 4.7e-07
 Identities = 31/76 (40%), Positives = 41/76 (53%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V V +LS +    D+   F PFG +S   V  D  TG S+G+GFV+F NK DA+ AI  +
Sbjct:   117 VFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHM 176

Query:   274 NGYGYDNLILRVEWAT 289
              G       +R  WAT
Sbjct:   177 GGQWLGGRQIRTNWAT 192


>FB|FBgn0085391 [details] [associations]
            symbol:CG34362 species:7227 "Drosophila melanogaster"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:AE014297 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0000381 GeneTree:ENSGT00680000099967
            RefSeq:NP_001163754.1 UniGene:Dm.13924 ProteinModelPortal:E1JIZ9
            SMR:E1JIZ9 EnsemblMetazoa:FBtr0301397 GeneID:43362
            KEGG:dme:Dmel_CG34362 FlyBase:FBgn0085391 GenomeRNAi:43362
            NextBio:833552 Bgee:E1JIZ9 Uniprot:E1JIZ9
        Length = 800

 Score = 144 (55.7 bits), Expect = 4.9e-07, P = 4.9e-07
 Identities = 37/110 (33%), Positives = 54/110 (49%)

Query:   190 VPPGMRAGAERTGTDMRRRNDENS----------VRVTNLSEDTREPDLLELFRPFGAVS 239
             +PP   A  E  G DM   ++E            + V +LS +     L E F PFG +S
Sbjct:   429 LPPPHAARTEGGGQDMEDSDEEMEYMPPLHKQFHIFVGDLSSEIETQQLREAFTPFGEIS 488

Query:   240 RVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWAT 289
                V  D +T  S+G+GFV+F+ K +A+ AI  +NG    +  +R  WAT
Sbjct:   489 DCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAMNGQWLGSRSIRTNWAT 538


>ASPGD|ASPL0000061196 [details] [associations]
            symbol:AN10164 species:162425 "Emericella nidulans"
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0043488 "regulation of mRNA stability"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
            [GO:0008266 "poly(U) RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 EMBL:BN001308 Gene3D:3.30.70.330 GO:GO:0003676
            ProteinModelPortal:C8VTL0 EnsemblFungi:CADANIAT00001543 OMA:QNTNPIP
            Uniprot:C8VTL0
        Length = 477

 Score = 141 (54.7 bits), Expect = 5.1e-07, P = 5.1e-07
 Identities = 29/76 (38%), Positives = 44/76 (57%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V +LS +  +  LL+ F  FG+VS   V  D KTG SRG+GFV F  + DA++A+  ++G
Sbjct:   186 VGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDG 245

Query:   276 YGYDNLILRVEWATPR 291
                 +  +R  WA  +
Sbjct:   246 EWLGSRAIRCNWANQK 261


>ASPGD|ASPL0000040642 [details] [associations]
            symbol:AN2989 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 EMBL:BN001306
            GO:GO:0003676 HOGENOM:HOG000276232 OMA:ISEMDGK
            ProteinModelPortal:C8VIY5 EnsemblFungi:CADANIAT00010091
            Uniprot:C8VIY5
        Length = 128

 Score = 119 (46.9 bits), Expect = 5.5e-07, P = 5.5e-07
 Identities = 26/76 (34%), Positives = 41/76 (53%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             +  L+  T +  L E F  +G +    V  D+ T  SRGFGFV F ++ +A  A+  +N 
Sbjct:     6 IGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMGAMNN 65

Query:   276 YGYDNLILRVEWATPR 291
               +D  I+RV+ A+ R
Sbjct:    66 QEFDGRIIRVDKASER 81


>UNIPROTKB|Q3ZBJ1 [details] [associations]
            symbol:NCBP2 "Nuclear cap-binding protein subunit 2"
            species:9913 "Bos taurus" [GO:0045292 "mRNA cis splicing, via
            spliceosome" evidence=ISS] [GO:0006408 "snRNA export from nucleus"
            evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS] [GO:0046833
            "positive regulation of RNA export from nucleus" evidence=ISS]
            [GO:0006446 "regulation of translational initiation" evidence=ISS]
            [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0000340 "RNA
            7-methylguanosine cap binding" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0000184 "nuclear-transcribed mRNA
            catabolic process, nonsense-mediated decay" evidence=ISS]
            [GO:0005845 "mRNA cap binding complex" evidence=ISS] [GO:0006370
            "7-methylguanosine mRNA capping" evidence=ISS] [GO:0051028 "mRNA
            transport" evidence=IEA] [GO:0031047 "gene silencing by RNA"
            evidence=IEA] [GO:0005846 "nuclear cap binding complex"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR027157
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
            GO:GO:0005654 GO:GO:0000184 GO:GO:0000166 GO:GO:0006446
            Gene3D:3.30.70.330 GO:GO:0031047 GO:GO:0005845 GO:GO:0000340
            GO:GO:0051028 eggNOG:COG0724 GO:GO:0006370 GO:GO:0045292
            HOGENOM:HOG000217589 HOVERGEN:HBG052581 OrthoDB:EOG470TJG
            PANTHER:PTHR18847 KO:K12883 EMBL:BC103267 IPI:IPI00687118
            RefSeq:NP_001029568.1 UniGene:Bt.49382 ProteinModelPortal:Q3ZBJ1
            SMR:Q3ZBJ1 STRING:Q3ZBJ1 PRIDE:Q3ZBJ1 Ensembl:ENSBTAT00000011684
            GeneID:510872 KEGG:bta:510872 CTD:22916
            GeneTree:ENSGT00390000003197 InParanoid:Q3ZBJ1 OMA:RQDYDPA
            NextBio:20869659 GO:GO:0046833 GO:GO:0006408 Uniprot:Q3ZBJ1
        Length = 156

 Score = 119 (46.9 bits), Expect = 5.5e-07, P = 5.5e-07
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS  T E  + ELF   G + ++ + +D+    + GF FV + ++ DA+ A+  +NG
Sbjct:    44 VGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYING 103

Query:   276 YGYDNLILRVEW 287
                D+ I+R +W
Sbjct:   104 TRLDDRIIRTDW 115


>UNIPROTKB|E2RFC9 [details] [associations]
            symbol:NCBP2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045292 "mRNA cis splicing, via spliceosome"
            evidence=IEA] [GO:0006446 "regulation of translational initiation"
            evidence=IEA] [GO:0006370 "7-methylguanosine mRNA capping"
            evidence=IEA] [GO:0005845 "mRNA cap binding complex" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm"
            evidence=IEA] [GO:0000340 "RNA 7-methylguanosine cap binding"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0005846
            "nuclear cap binding complex" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            InterPro:IPR027157 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005737 GO:GO:0005654 GO:GO:0000184 GO:GO:0000166
            GO:GO:0006446 Gene3D:3.30.70.330 GO:GO:0005845 GO:GO:0000340
            GO:GO:0006370 PANTHER:PTHR18847 KO:K12883 CTD:22916
            GeneTree:ENSGT00390000003197 OMA:RQDYDPA EMBL:AAEX03017103
            RefSeq:XP_535779.1 ProteinModelPortal:E2RFC9 SMR:E2RFC9
            PRIDE:E2RFC9 Ensembl:ENSCAFT00000020794 GeneID:478603
            KEGG:cfa:478603 NextBio:20853918 Uniprot:E2RFC9
        Length = 156

 Score = 119 (46.9 bits), Expect = 5.5e-07, P = 5.5e-07
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS  T E  + ELF   G + ++ + +D+    + GF FV + ++ DA+ A+  +NG
Sbjct:    44 VGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYING 103

Query:   276 YGYDNLILRVEW 287
                D+ I+R +W
Sbjct:   104 TRLDDRIIRTDW 115


>UNIPROTKB|P52298 [details] [associations]
            symbol:NCBP2 "Nuclear cap-binding protein subunit 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005846 "nuclear cap binding complex"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006408 "snRNA export
            from nucleus" evidence=ISS;NAS] [GO:0000340 "RNA 7-methylguanosine
            cap binding" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IMP;IDA;TAS] [GO:0006370
            "7-methylguanosine mRNA capping" evidence=IDA;TAS] [GO:0005845
            "mRNA cap binding complex" evidence=IDA] [GO:0005654 "nucleoplasm"
            evidence=IDA;TAS] [GO:0006446 "regulation of translational
            initiation" evidence=IDA] [GO:0046833 "positive regulation of RNA
            export from nucleus" evidence=ISS] [GO:0008380 "RNA splicing"
            evidence=ISS;TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0003723 "RNA binding" evidence=IDA] [GO:0000339 "RNA cap
            binding" evidence=NAS] [GO:0045292 "mRNA cis splicing, via
            spliceosome" evidence=IDA] [GO:0000387 "spliceosomal snRNP
            assembly" evidence=TAS] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=TAS] [GO:0006368 "transcription elongation from RNA
            polymerase II promoter" evidence=TAS] [GO:0006369 "termination of
            RNA polymerase II transcription" evidence=TAS] [GO:0006397 "mRNA
            processing" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
            evidence=TAS] [GO:0008334 "histone mRNA metabolic process"
            evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
            [GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0031124 "mRNA 3'-end processing"
            evidence=TAS] [GO:0034660 "ncRNA metabolic process" evidence=TAS]
            [GO:0050434 "positive regulation of viral transcription"
            evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
            Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000504
            InterPro:IPR012677 InterPro:IPR027157 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005829 Reactome:REACT_116125 GO:GO:0005654
            GO:GO:0016032 GO:GO:0000184 GO:GO:0000166 GO:GO:0006446
            Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0006368 GO:GO:0006406
            GO:GO:0031047 GO:GO:0005845 GO:GO:0000340 GO:GO:0000387
            GO:GO:0034660 EMBL:CH471191 Reactome:REACT_1788 eggNOG:COG0724
            GO:GO:0006370 GO:GO:0050434 GO:GO:0045292 GO:GO:0006369
            GO:GO:0031124 Reactome:REACT_78 PDB:3FEX PDB:3FEY PDBsum:3FEX
            PDBsum:3FEY GO:GO:0008334 HOGENOM:HOG000217589 HOVERGEN:HBG052581
            PANTHER:PTHR18847 PDB:1H2T PDB:1H2U PDB:1H2V PDB:1H6K PDB:1N52
            PDB:1N54 PDBsum:1H2T PDBsum:1H2U PDBsum:1H2V PDBsum:1H6K
            PDBsum:1N52 PDBsum:1N54 KO:K12883 CTD:22916 OMA:RQDYDPA
            GO:GO:0046833 GO:GO:0006408 EMBL:X84157 EMBL:D59253 EMBL:AK297506
            EMBL:AK315903 EMBL:AK316601 EMBL:AY644767 EMBL:BT006842
            EMBL:BC001255 IPI:IPI00183500 IPI:IPI00927860 PIR:I37222 PIR:S60109
            RefSeq:NP_001036005.1 RefSeq:NP_031388.2 UniGene:Hs.591671
            DisProt:DP00393 ProteinModelPortal:P52298 SMR:P52298 DIP:DIP-33246N
            IntAct:P52298 MINT:MINT-248711 STRING:P52298 PhosphoSite:P52298
            DMDM:1705651 PaxDb:P52298 PRIDE:P52298 DNASU:22916
            Ensembl:ENST00000321256 Ensembl:ENST00000452404 GeneID:22916
            KEGG:hsa:22916 UCSC:uc003fxb.1 UCSC:uc011btz.1
            GeneCards:GC03M196662 HGNC:HGNC:7659 HPA:HPA044850 MIM:605133
            neXtProt:NX_P52298 PharmGKB:PA31462 InParanoid:P52298
            PhylomeDB:P52298 ChiTaRS:NCBP2 EvolutionaryTrace:P52298
            GenomeRNAi:22916 NextBio:43603 ArrayExpress:P52298 Bgee:P52298
            CleanEx:HS_NCBP2 Genevestigator:P52298 GermOnline:ENSG00000114503
            Uniprot:P52298
        Length = 156

 Score = 119 (46.9 bits), Expect = 5.5e-07, P = 5.5e-07
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS  T E  + ELF   G + ++ + +D+    + GF FV + ++ DA+ A+  +NG
Sbjct:    44 VGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYING 103

Query:   276 YGYDNLILRVEW 287
                D+ I+R +W
Sbjct:   104 TRLDDRIIRTDW 115


>UNIPROTKB|F2Z5Q9 [details] [associations]
            symbol:NCBP2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045292 "mRNA cis splicing, via spliceosome"
            evidence=IEA] [GO:0005846 "nuclear cap binding complex"
            evidence=IEA] [GO:0000339 "RNA cap binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 InterPro:IPR027157 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            PANTHER:PTHR18847 KO:K12883 CTD:22916 GeneTree:ENSGT00390000003197
            OMA:RQDYDPA EMBL:CU862047 RefSeq:XP_003358812.2 UniGene:Ssc.56609
            ProteinModelPortal:F2Z5Q9 SMR:F2Z5Q9 PRIDE:F2Z5Q9
            Ensembl:ENSSSCT00000024784 GeneID:100156513 KEGG:ssc:100156513
            Uniprot:F2Z5Q9
        Length = 156

 Score = 119 (46.9 bits), Expect = 5.5e-07, P = 5.5e-07
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS  T E  + ELF   G + ++ + +D+    + GF FV + ++ DA+ A+  +NG
Sbjct:    44 VGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYING 103

Query:   276 YGYDNLILRVEW 287
                D+ I+R +W
Sbjct:   104 TRLDDRIIRTDW 115


>MGI|MGI:1915342 [details] [associations]
            symbol:Ncbp2 "nuclear cap binding protein subunit 2"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=ISO] [GO:0000340 "RNA
            7-methylguanosine cap binding" evidence=ISO] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
            evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005845
            "mRNA cap binding complex" evidence=ISO] [GO:0006370
            "7-methylguanosine mRNA capping" evidence=ISO] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0006417 "regulation of translation"
            evidence=IEA] [GO:0006446 "regulation of translational initiation"
            evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0008380
            "RNA splicing" evidence=IEA] [GO:0031047 "gene silencing by RNA"
            evidence=IEA] [GO:0045292 "mRNA cis splicing, via spliceosome"
            evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR027157
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:1915342
            GO:GO:0005737 GO:GO:0005654 GO:GO:0000184 GO:GO:0000166
            GO:GO:0006446 Gene3D:3.30.70.330 EMBL:CH466521 GO:GO:0031047
            GO:GO:0005845 GO:GO:0000340 GO:GO:0051028 eggNOG:COG0724
            GO:GO:0006370 GO:GO:0045292 HOGENOM:HOG000217589 HOVERGEN:HBG052581
            OrthoDB:EOG470TJG PANTHER:PTHR18847 KO:K12883 CTD:22916
            GeneTree:ENSGT00390000003197 OMA:RQDYDPA GO:GO:0046833
            GO:GO:0006408 EMBL:AK008980 EMBL:AK012659 EMBL:AK077841
            EMBL:AK147027 EMBL:BC118926 IPI:IPI00132019 RefSeq:NP_080830.1
            UniGene:Mm.290027 ProteinModelPortal:Q9CQ49 SMR:Q9CQ49
            STRING:Q9CQ49 PhosphoSite:Q9CQ49 PaxDb:Q9CQ49 PRIDE:Q9CQ49
            Ensembl:ENSMUST00000023460 GeneID:68092 KEGG:mmu:68092
            UCSC:uc007yxz.2 InParanoid:Q0VF93 NextBio:326400 Bgee:Q9CQ49
            CleanEx:MM_NCBP2 Genevestigator:Q9CQ49
            GermOnline:ENSMUSG00000022774 Uniprot:Q9CQ49
        Length = 156

 Score = 119 (46.9 bits), Expect = 5.5e-07, P = 5.5e-07
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS  T E  + ELF   G + ++ + +D+    + GF FV + ++ DA+ A+  +NG
Sbjct:    44 VGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYING 103

Query:   276 YGYDNLILRVEW 287
                D+ I+R +W
Sbjct:   104 TRLDDRIIRTDW 115


>RGD|1596188 [details] [associations]
            symbol:Ncbp2 "nuclear cap binding protein subunit 2"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA;ISO] [GO:0000340
            "RNA 7-methylguanosine cap binding" evidence=ISO;ISS] [GO:0005634
            "nucleus" evidence=IEA;ISO] [GO:0005654 "nucleoplasm" evidence=ISO]
            [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005845 "mRNA cap
            binding complex" evidence=ISO] [GO:0005846 "nuclear cap binding
            complex" evidence=IEA] [GO:0006370 "7-methylguanosine mRNA capping"
            evidence=IEA;ISO] [GO:0006408 "snRNA export from nucleus"
            evidence=ISS] [GO:0006417 "regulation of translation" evidence=IEA]
            [GO:0006446 "regulation of translational initiation" evidence=ISO]
            [GO:0008380 "RNA splicing" evidence=ISS] [GO:0031047 "gene
            silencing by RNA" evidence=IEA] [GO:0045292 "mRNA cis splicing, via
            spliceosome" evidence=ISO;ISS] [GO:0046833 "positive regulation of
            RNA export from nucleus" evidence=ISS] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0005730
            "nucleolus" evidence=ISO] InterPro:IPR000504 InterPro:IPR012677
            InterPro:IPR027157 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1596188 GO:GO:0005737 GO:GO:0005654 GO:GO:0000184 GO:GO:0000166
            GO:GO:0006446 Gene3D:3.30.70.330 GO:GO:0031047 GO:GO:0005845
            GO:GO:0000340 GO:GO:0051028 eggNOG:COG0724 GO:GO:0006370
            GO:GO:0045292 HOGENOM:HOG000217589 OrthoDB:EOG470TJG
            PANTHER:PTHR18847 KO:K12883 GeneTree:ENSGT00390000003197
            OMA:RQDYDPA GO:GO:0046833 GO:GO:0006408 EMBL:BC161994
            IPI:IPI00192753 RefSeq:NP_001102995.1 RefSeq:XP_003751123.1
            UniGene:Rn.204538 ProteinModelPortal:B1WC40 SMR:B1WC40
            STRING:B1WC40 PhosphoSite:B1WC40 PRIDE:B1WC40
            Ensembl:ENSRNOT00000002381 GeneID:100911481 GeneID:689116
            KEGG:rno:100911481 KEGG:rno:689116 UCSC:RGD:1596188 CTD:80235
            NextBio:737969 Genevestigator:B1WC40 Uniprot:B1WC40
        Length = 156

 Score = 119 (46.9 bits), Expect = 5.5e-07, P = 5.5e-07
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS  T E  + ELF   G + ++ + +D+    + GF FV + ++ DA+ A+  +NG
Sbjct:    44 VGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYING 103

Query:   276 YGYDNLILRVEW 287
                D+ I+R +W
Sbjct:   104 TRLDDRIIRTDW 115


>UNIPROTKB|G3N063 [details] [associations]
            symbol:ELAVL2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:RAVENGP EMBL:DAAA02022184
            EMBL:DAAA02022185 Ensembl:ENSBTAT00000065940 Uniprot:G3N063
        Length = 388

 Score = 139 (54.0 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL+ D  E  L ++F PFGAV+ V V  D  T   +GFGFV   N ++A  AI  LNG
Sbjct:   310 VYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 369

Query:   276 YGYDNLILRVEWATPRTN 293
             Y   + +L+V + T +T+
Sbjct:   370 YRLGDRVLQV-FKTNKTH 386

 Score = 130 (50.8 bits), Expect = 6.7e-06, P = 6.7e-06
 Identities = 28/88 (31%), Positives = 47/88 (53%)

Query:   204 DMRRRNDENSVRVTN-LSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVN 262
             D     D  +  + N L ++  + +L  LF   G +    +  D+ TG S G+GFVN+++
Sbjct:    59 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 118

Query:   263 KEDAQRAINKLNGYGYDNLILRVEWATP 290
              +DA++AIN LNG       ++V +A P
Sbjct:   119 PKDAEKAINTLNGLRLQTKTIKVSYARP 146

 Score = 116 (45.9 bits), Expect = 0.00027, P = 0.00027
 Identities = 26/66 (39%), Positives = 39/66 (59%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D N + V+ L +   + +L +LF  +G +    + VDQ TGISRG GF+ F  + +A+ A
Sbjct:   153 DAN-LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEA 211

Query:   270 INKLNG 275
             I  LNG
Sbjct:   212 IKGLNG 217


>TAIR|locus:2018794 [details] [associations]
            symbol:UBP1B "oligouridylate binding protein 1B"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0005829 "cytosol" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC007843 HSSP:P33240
            HOGENOM:HOG000206748 KO:K13201 OMA:NGSKQLR ProtClustDB:CLSN2682164
            EMBL:AY085705 EMBL:BT026477 IPI:IPI00543090 RefSeq:NP_564018.1
            UniGene:At.43816 ProteinModelPortal:Q9LQI9 SMR:Q9LQI9 STRING:Q9LQI9
            PRIDE:Q9LQI9 EnsemblPlants:AT1G17370.1 GeneID:838309
            KEGG:ath:AT1G17370 TAIR:At1g17370 InParanoid:Q9LQI9
            PhylomeDB:Q9LQI9 Genevestigator:Q9LQI9 Uniprot:Q9LQI9
        Length = 419

 Score = 139 (54.0 bits), Expect = 7.0e-07, P = 7.0e-07
 Identities = 34/86 (39%), Positives = 49/86 (56%)

Query:   207 RRNDENS---VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNK 263
             +R D +S   + V +LS +  +  L   F  +   S   V  DQKTG SRGFGFV+F N+
Sbjct:   131 QREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQ 190

Query:   264 EDAQRAINKLNGYGYDNLILRVEWAT 289
             +DAQ AI+++ G    +  +R  WAT
Sbjct:   191 QDAQTAIDEITGKWLGSRQIRCNWAT 216


>UNIPROTKB|P52299 [details] [associations]
            symbol:ncbp2 "Nuclear cap-binding protein subunit 2"
            species:8355 "Xenopus laevis" [GO:0000184 "nuclear-transcribed mRNA
            catabolic process, nonsense-mediated decay" evidence=ISS]
            [GO:0000340 "RNA 7-methylguanosine cap binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0005654 "nucleoplasm"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005845
            "mRNA cap binding complex" evidence=ISS] [GO:0006370
            "7-methylguanosine mRNA capping" evidence=ISS] [GO:0006408 "snRNA
            export from nucleus" evidence=IDA] [GO:0006446 "regulation of
            translational initiation" evidence=ISS] [GO:0008380 "RNA splicing"
            evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
            evidence=ISS] [GO:0046833 "positive regulation of RNA export from
            nucleus" evidence=IDA] [GO:0003723 "RNA binding" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR027157
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
            GO:GO:0005654 GO:GO:0000184 GO:GO:0000166 GO:GO:0006446
            Gene3D:3.30.70.330 GO:GO:0031047 GO:GO:0005845 GO:GO:0000340
            GO:GO:0051028 GO:GO:0006370 GO:GO:0045292 HOVERGEN:HBG052581
            PANTHER:PTHR18847 KO:K12883 CTD:22916 GO:GO:0046833 GO:GO:0006408
            EMBL:BC072902 EMBL:X84788 PIR:I51602 RefSeq:NP_001167476.1
            UniGene:Xl.43439 UniGene:Xl.81730 ProteinModelPortal:P52299
            SMR:P52299 GeneID:100380998 KEGG:xla:100380998
            Xenbase:XB-GENE-1005792 Uniprot:P52299
        Length = 153

 Score = 118 (46.6 bits), Expect = 7.1e-07, P = 7.1e-07
 Identities = 26/72 (36%), Positives = 41/72 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS  T E  + ELF   G V R+ + +D+    + GF FV +  + DA++A+  +NG
Sbjct:    41 VGNLSFYTTEEQIHELFSKSGDVKRIVMGLDKVKKTACGFCFVEYYTRADAEQAMRFING 100

Query:   276 YGYDNLILRVEW 287
                D+ I+R +W
Sbjct:   101 TRLDDRIVRTDW 112


>ZFIN|ZDB-GENE-030131-5836 [details] [associations]
            symbol:pabpc1l "poly(A) binding protein,
            cytoplasmic 1-like" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
            SMART:SM00360 SMART:SM00517 ZFIN:ZDB-GENE-030131-5836 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 HOVERGEN:HBG002295 KO:K13126
            Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628 CTD:80336
            HSSP:P11940 EMBL:BC044513 IPI:IPI00863260 RefSeq:NP_956133.1
            UniGene:Dr.14309 ProteinModelPortal:Q803E7 SMR:Q803E7 PRIDE:Q803E7
            GeneID:327625 KEGG:dre:327625 NextBio:20810113 ArrayExpress:Q803E7
            Bgee:Q803E7 Uniprot:Q803E7
        Length = 620

 Score = 141 (54.7 bits), Expect = 7.7e-07, P = 7.7e-07
 Identities = 33/79 (41%), Positives = 44/79 (55%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             +V + N  ED     L  +F  FG    V V  D++ G SRGFGFVNFVN  DA+RA+ +
Sbjct:   192 NVYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTDER-GRSRGFGFVNFVNHGDARRAVTE 250

Query:   273 LNGYGYDNLILRVEWATPR 291
             +NG   +  +L V  A  R
Sbjct:   251 MNGKELNGRVLYVGRAQKR 269


>GENEDB_PFALCIPARUM|PFE0160c [details] [associations]
            symbol:PFE0160c "Ser/Arg-rich splicing factor,
            putative" species:5833 "Plasmodium falciparum" [GO:0005681
            "spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0008380 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003676 EMBL:AL844504
            HSSP:Q61474 RefSeq:XP_001351591.1 ProteinModelPortal:Q8I468
            IntAct:Q8I468 MINT:MINT-1654287 PRIDE:Q8I468
            EnsemblProtists:PFE0160c:mRNA GeneID:812926 KEGG:pfa:PFE0160c
            EuPathDB:PlasmoDB:PF3D7_0503300 HOGENOM:HOG000284061 OMA:ANTESTQ
            ProtClustDB:CLSZ2848078 Uniprot:Q8I468
        Length = 308

 Score = 136 (52.9 bits), Expect = 8.2e-07, P = 8.2e-07
 Identities = 29/84 (34%), Positives = 47/84 (55%)

Query:   202 GTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFV 261
             G  + ++N   S+ +  L  DT    + E F+ FGA+  VY+ +D  T   RGFGFV F 
Sbjct:     2 GPYINQKNQPMSLLIRKLKFDTSPSIVREKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFY 61

Query:   262 NKEDAQRAINKLNGYGYDNLILRV 285
             + +DA++A+ ++NG   D   + V
Sbjct:    62 DAKDAEQALKEMNGSEIDGSRIEV 85


>UNIPROTKB|Q8I468 [details] [associations]
            symbol:PFE0160c "Ser/Arg-rich splicing factor, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
            complex" evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0008380 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0005681 GO:GO:0003676 EMBL:AL844504 HSSP:Q61474
            RefSeq:XP_001351591.1 ProteinModelPortal:Q8I468 IntAct:Q8I468
            MINT:MINT-1654287 PRIDE:Q8I468 EnsemblProtists:PFE0160c:mRNA
            GeneID:812926 KEGG:pfa:PFE0160c EuPathDB:PlasmoDB:PF3D7_0503300
            HOGENOM:HOG000284061 OMA:ANTESTQ ProtClustDB:CLSZ2848078
            Uniprot:Q8I468
        Length = 308

 Score = 136 (52.9 bits), Expect = 8.2e-07, P = 8.2e-07
 Identities = 29/84 (34%), Positives = 47/84 (55%)

Query:   202 GTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFV 261
             G  + ++N   S+ +  L  DT    + E F+ FGA+  VY+ +D  T   RGFGFV F 
Sbjct:     2 GPYINQKNQPMSLLIRKLKFDTSPSIVREKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFY 61

Query:   262 NKEDAQRAINKLNGYGYDNLILRV 285
             + +DA++A+ ++NG   D   + V
Sbjct:    62 DAKDAEQALKEMNGSEIDGSRIEV 85


>WB|WBGene00004701 [details] [associations]
            symbol:rsp-4 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0040010
            "positive regulation of growth rate" evidence=IMP] [GO:0002009
            "morphogenesis of an epithelium" evidence=IMP] [GO:0010171 "body
            morphogenesis" evidence=IMP] [GO:0009790 "embryo development"
            evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0042127 "regulation of cell proliferation" evidence=IMP]
            [GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0005634
            "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
            GO:GO:0040010 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0010171
            GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0000398
            GO:GO:0040020 EMBL:FO081042 GO:GO:0001703 PIR:T15917
            RefSeq:NP_495013.1 RefSeq:NP_495014.1 UniGene:Cel.5535
            ProteinModelPortal:Q09511 SMR:Q09511 DIP:DIP-26638N
            MINT:MINT-1120954 STRING:Q09511 PaxDb:Q09511 PRIDE:Q09511
            EnsemblMetazoa:EEED8.7a GeneID:173915 KEGG:cel:CELE_EEED8.7
            UCSC:EEED8.7a CTD:173915 WormBase:EEED8.7a WormBase:EEED8.7b
            eggNOG:NOG254270 GeneTree:ENSGT00700000104403 HOGENOM:HOG000276233
            InParanoid:Q09511 KO:K12891 OMA:YDATEYD NextBio:881647
            Uniprot:Q09511
        Length = 196

 Score = 129 (50.5 bits), Expect = 8.7e-07, P = 8.7e-07
 Identities = 32/90 (35%), Positives = 48/90 (53%)

Query:   202 GTDMRRRNDEN---SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFV 258
             G D R   D N   S+++ NLS  T   DL   F  +G +  V++  D+ +  S+GFGFV
Sbjct:     6 GGDRRAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFV 65

Query:   259 NFVNKEDAQRAINKLNGYGYDNLILRVEWA 288
              F  + DA+ A+++ +G   D   LRV  A
Sbjct:    66 RFYERRDAEHALDRTDGKLVDGRELRVTLA 95


>UNIPROTKB|Q09511 [details] [associations]
            symbol:rsp-4 "Probable splicing factor,
            arginine/serine-rich 4" species:6239 "Caenorhabditis elegans"
            [GO:0005634 "nucleus" evidence=IDA] [GO:0003723 "RNA binding"
            evidence=NAS] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=NAS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0009792
            GO:GO:0002009 GO:GO:0040010 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0010171 GO:GO:0040011 GO:GO:0003723 GO:GO:0042127
            GO:GO:0000398 GO:GO:0040020 EMBL:FO081042 GO:GO:0001703 PIR:T15917
            RefSeq:NP_495013.1 RefSeq:NP_495014.1 UniGene:Cel.5535
            ProteinModelPortal:Q09511 SMR:Q09511 DIP:DIP-26638N
            MINT:MINT-1120954 STRING:Q09511 PaxDb:Q09511 PRIDE:Q09511
            EnsemblMetazoa:EEED8.7a GeneID:173915 KEGG:cel:CELE_EEED8.7
            UCSC:EEED8.7a CTD:173915 WormBase:EEED8.7a WormBase:EEED8.7b
            eggNOG:NOG254270 GeneTree:ENSGT00700000104403 HOGENOM:HOG000276233
            InParanoid:Q09511 KO:K12891 OMA:YDATEYD NextBio:881647
            Uniprot:Q09511
        Length = 196

 Score = 129 (50.5 bits), Expect = 8.7e-07, P = 8.7e-07
 Identities = 32/90 (35%), Positives = 48/90 (53%)

Query:   202 GTDMRRRNDEN---SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFV 258
             G D R   D N   S+++ NLS  T   DL   F  +G +  V++  D+ +  S+GFGFV
Sbjct:     6 GGDRRAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFV 65

Query:   259 NFVNKEDAQRAINKLNGYGYDNLILRVEWA 288
              F  + DA+ A+++ +G   D   LRV  A
Sbjct:    66 RFYERRDAEHALDRTDGKLVDGRELRVTLA 95


>UNIPROTKB|K7GNR2 [details] [associations]
            symbol:RBMX "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            Gene3D:3.30.70.330 GeneTree:ENSGT00700000104336 EMBL:FP102148
            Ensembl:ENSSSCT00000034855 Uniprot:K7GNR2
        Length = 129

 Score = 117 (46.2 bits), Expect = 9.2e-07, P = 9.2e-07
 Identities = 26/74 (35%), Positives = 40/74 (54%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             +  L+ +T E  L  +F  +G +  V +  D++T  SRGF FV F +  DA+ A   +NG
Sbjct:    12 IGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNG 71

Query:   276 YGYDNLILRVEWAT 289
                D   ++VE AT
Sbjct:    72 KSLDGKAIKVEQAT 85


>TAIR|locus:2119495 [details] [associations]
            symbol:GR-RBP2 "AT4G13850" species:3702 "Arabidopsis
            thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005739
            "mitochondrion" evidence=ISM;IDA] [GO:0009409 "response to cold"
            evidence=IGI;IEP;IMP] [GO:0003690 "double-stranded DNA binding"
            evidence=IDA] [GO:0003697 "single-stranded DNA binding"
            evidence=IDA] [GO:0009414 "response to water deprivation"
            evidence=IEP] [GO:0005524 "ATP binding" evidence=IDA] [GO:0001072
            "RNA binding transcription antitermination factor activity"
            evidence=IDA] [GO:0006970 "response to osmotic stress"
            evidence=IMP] [GO:0009631 "cold acclimation" evidence=IMP]
            [GO:0009651 "response to salt stress" evidence=IMP] [GO:0009845
            "seed germination" evidence=IMP] [GO:0031564 "transcription
            antitermination" evidence=IDA] [GO:0005507 "copper ion binding"
            evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
            [GO:0006364 "rRNA processing" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005739 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0005507 GO:GO:0003723
            GO:GO:0006970 GO:GO:0009845 GO:GO:0003690 GO:GO:0003697
            eggNOG:COG0724 EMBL:AL035528 EMBL:AL161537 HOGENOM:HOG000276232
            EMBL:AJ002892 EMBL:AY072361 EMBL:BT002197 EMBL:AY085621 EMBL:X69377
            EMBL:Z18189 IPI:IPI00527583 PIR:S31443 PIR:T05254
            RefSeq:NP_193121.1 UniGene:At.15585 UniGene:At.2
            ProteinModelPortal:Q9SVM8 SMR:Q9SVM8 IntAct:Q9SVM8 STRING:Q9SVM8
            PaxDb:Q9SVM8 PRIDE:Q9SVM8 ProMEX:Q9SVM8 EnsemblPlants:AT4G13850.1
            GeneID:827019 KEGG:ath:AT4G13850 GeneFarm:3949 TAIR:At4g13850
            InParanoid:Q9SVM8 OMA:ISEMDGK PhylomeDB:Q9SVM8 ProtClustDB:PLN03134
            Genevestigator:Q9SVM8 Uniprot:Q9SVM8
        Length = 158

 Score = 117 (46.2 bits), Expect = 9.2e-07, P = 9.2e-07
 Identities = 30/76 (39%), Positives = 43/76 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             +  LS  T +  L + F  FG V    V VD++TG SRGFGFVNF ++  A  AI++++G
Sbjct:    39 IGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDG 98

Query:   276 YGYDNLILRVEWATPR 291
                +   +RV  A  R
Sbjct:    99 KELNGRHIRVNPANDR 114


>ZFIN|ZDB-GENE-020419-31 [details] [associations]
            symbol:ncbp2 "nuclear cap binding protein subunit 2"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000339 "RNA cap binding" evidence=IEA]
            [GO:0045292 "mRNA cis splicing, via spliceosome" evidence=IEA;ISS]
            [GO:0005846 "nuclear cap binding complex" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
            evidence=ISS] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
            [GO:0046833 "positive regulation of RNA export from nucleus"
            evidence=ISS] [GO:0000340 "RNA 7-methylguanosine cap binding"
            evidence=ISS] [GO:0006408 "snRNA export from nucleus" evidence=ISS]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
            [GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0051028 "mRNA
            transport" evidence=IEA] [GO:0006370 "7-methylguanosine mRNA
            capping" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR027157
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-020419-31
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0031047 GO:GO:0000340
            GO:GO:0051028 eggNOG:COG0724 GO:GO:0006370 GO:GO:0045292
            HOGENOM:HOG000217589 OrthoDB:EOG470TJG PANTHER:PTHR18847
            HSSP:P52298 KO:K12883 CTD:22916 GeneTree:ENSGT00390000003197
            OMA:RQDYDPA GO:GO:0046833 GO:GO:0006408 EMBL:AY099530 EMBL:AL953867
            EMBL:BC083529 IPI:IPI00487113 RefSeq:NP_775356.1 UniGene:Dr.83993
            ProteinModelPortal:Q8JGR6 SMR:Q8JGR6 STRING:Q8JGR6
            Ensembl:ENSDART00000008365 GeneID:192325 KEGG:dre:192325
            InParanoid:Q8JGR6 NextBio:20797161 Bgee:Q8JGR6 Uniprot:Q8JGR6
        Length = 155

 Score = 117 (46.2 bits), Expect = 9.2e-07, P = 9.2e-07
 Identities = 26/72 (36%), Positives = 40/72 (55%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS  T E  + ELF   G V R+ + +D+    + GF FV +  + DA+ A+  +NG
Sbjct:    43 VGNLSFYTTEEQVHELFAKCGDVKRIIIGLDKIKKTACGFCFVEYYTRADAENAMRFVNG 102

Query:   276 YGYDNLILRVEW 287
                D+ I+R +W
Sbjct:   103 TRLDDRIIRTDW 114


>UNIPROTKB|G4N7J4 [details] [associations]
            symbol:MGG_06400 "Nuclear and cytoplasmic polyadenylated
            RNA-binding protein pub1" species:242507 "Magnaporthe oryzae 70-15"
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CM001234
            KO:K13201 RefSeq:XP_003717170.1 ProteinModelPortal:G4N7J4
            EnsemblFungi:MGG_06400T0 GeneID:2684555 KEGG:mgr:MGG_06400
            Uniprot:G4N7J4
        Length = 479

 Score = 140 (54.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
 Identities = 31/96 (32%), Positives = 52/96 (54%)

Query:   198 AERTGTDMRRRNDENS--VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGF 255
             A +  T   + +  N   + V +LS +  +  L + F  FG+VS   V  D KTG SRG+
Sbjct:   160 AYQAATSATKEDTSNHFHIFVGDLSNEVNDEVLTQAFSVFGSVSEARVMWDMKTGRSRGY 219

Query:   256 GFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 291
             GFV F ++ DA++A++ ++G    +  +R  WA  +
Sbjct:   220 GFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQK 255

 Score = 36 (17.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
 Identities = 8/18 (44%), Positives = 10/18 (55%)

Query:   187 GTYVPPGMRAGAERTGTD 204
             GT +PP  +A A   G D
Sbjct:    10 GTQLPPPPQANAGAPGFD 27


>TAIR|locus:2173338 [details] [associations]
            symbol:SC35 "ortholog of human splicing factor SC35"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=RCA;TAS] [GO:0016607 "nuclear speck"
            evidence=IDA] [GO:0008380 "RNA splicing" evidence=NAS] [GO:0016020
            "membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0030422 "production of siRNA involved in RNA interference"
            evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
            silencing by miRNA" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005829 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016020
            GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AB008268 HSSP:P19339 GO:GO:0000398 eggNOG:COG0724
            HOGENOM:HOG000276233 KO:K12891 OMA:DHRRRTR EMBL:AY063890
            EMBL:AY122917 EMBL:AY127004 EMBL:AY143851 IPI:IPI00549029
            RefSeq:NP_201225.1 RefSeq:NP_851261.1 UniGene:At.23698
            UniGene:At.49215 ProteinModelPortal:Q9FMG4 SMR:Q9FMG4 STRING:Q9FMG4
            PaxDb:Q9FMG4 PRIDE:Q9FMG4 EnsemblPlants:AT5G64200.1
            EnsemblPlants:AT5G64200.2 GeneID:836541 KEGG:ath:AT5G64200
            TAIR:At5g64200 InParanoid:Q9FMG4 ProtClustDB:CLSN2914827
            ArrayExpress:Q9FMG4 Genevestigator:Q9FMG4 Uniprot:Q9FMG4
        Length = 303

 Score = 135 (52.6 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 29/80 (36%), Positives = 48/80 (60%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +D  S+ V N++  T   DL  LF  +G V  V++  D++TG SRGF FV +  K++A +
Sbjct:    13 SDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHK 72

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+ +L+G   D   + V++A
Sbjct:    73 AVERLDGRVVDGREITVQFA 92


>POMBASE|SPAC328.05 [details] [associations]
            symbol:SPAC328.05 "RNA-binding protein involved in export
            of mRNAs (predicted)" species:4896 "Schizosaccharomyces pombe"
            [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
            "cytosol" evidence=IDA] [GO:0016973 "poly(A)+ mRNA export from
            nucleus" evidence=ISO] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 PomBase:SPAC328.05
            GO:GO:0005829 GO:GO:0005634 EMBL:CU329670 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724 GO:GO:0016973
            OrthoDB:EOG4F21C2 RefSeq:NP_594207.3 HSSP:Q9D0B0
            EnsemblFungi:SPAC328.05.1 GeneID:2542567 NextBio:20803618
            Uniprot:Q9P3U1
        Length = 464

 Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 32/75 (42%), Positives = 45/75 (60%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             + V NL   T + +LL+LF   G+V R  +A +  TG S+GFG V F N+ DA  +I KL
Sbjct:   312 IYVGNLPWATSDRNLLDLFTDIGSVIRARIAYEP-TGRSKGFGVVQFENENDAASSIEKL 370

Query:   274 NGYGYDNLILRVEWA 288
             NGY Y    L++ +A
Sbjct:   371 NGYRYGGRPLQLSYA 385


>TAIR|locus:2058573 [details] [associations]
            symbol:PAB4 "AT2G23350" species:3702 "Arabidopsis
            thaliana" [GO:0003723 "RNA binding" evidence=ISS] [GO:0003743
            "translation initiation factor activity" evidence=ISS] [GO:0046686
            "response to cadmium ion" evidence=IEP] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR000504 InterPro:IPR002004 InterPro:IPR006515
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102
            PROSITE:PS51309 SMART:SM00360 SMART:SM00517 GO:GO:0005829
            GO:GO:0046686 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AC002391 eggNOG:COG0724
            KO:K13126 Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
            HOGENOM:HOG000217922 HSSP:P11940 OMA:MIRITYS EMBL:AY050859
            EMBL:AY079389 IPI:IPI00530940 PIR:T00497 RefSeq:NP_179916.1
            UniGene:At.25439 ProteinModelPortal:O22173 SMR:O22173 IntAct:O22173
            STRING:O22173 PaxDb:O22173 PRIDE:O22173 ProMEX:O22173
            EnsemblPlants:AT2G23350.1 GeneID:816867 KEGG:ath:AT2G23350
            TAIR:At2g23350 InParanoid:O22173 PhylomeDB:O22173
            ProtClustDB:CLSN2913301 Genevestigator:O22173 Uniprot:O22173
        Length = 662

 Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 37/95 (38%), Positives = 50/95 (52%)

Query:   186 KGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 245
             K  +V P +R     +  D  +  +   V V NLSE T + +L   F  +G++S   V  
Sbjct:   202 KQIFVGPFLRKEERESAADKMKFTN---VYVKNLSEATTDDELKTTFGQYGSISSAVVMR 258

Query:   246 DQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDN 280
             D   G SR FGFVNF N EDA RA+  LNG  +D+
Sbjct:   259 DGD-GKSRCFGFVNFENPEDAARAVEALNGKKFDD 292


>UNIPROTKB|D6RBQ9 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HOGENOM:HOG000234441 EMBL:AC124016 HGNC:HGNC:5036 ChiTaRS:HNRNPD
            InterPro:IPR012956 Pfam:PF08143 IPI:IPI00963980
            ProteinModelPortal:D6RBQ9 SMR:D6RBQ9 Ensembl:ENST00000503822
            ArrayExpress:D6RBQ9 Bgee:D6RBQ9 Uniprot:D6RBQ9
        Length = 155

 Score = 116 (45.9 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 35/99 (35%), Positives = 46/99 (46%)

Query:   185 TKGTYVPPGMRAG-AERTGTDM---RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSR 240
             T G     G   G AE  G  +   +   DE  + +  LS DT + DL + F  FG V  
Sbjct:    47 TGGGTASGGTEGGSAESEGAKIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVD 106

Query:   241 VYVAVDQKTGISRGFGFVNFVNKEDAQRAIN----KLNG 275
               + +D  TG SRGFGFV F   E   + ++    KLNG
Sbjct:   107 CTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNG 145


>TAIR|locus:2049816 [details] [associations]
            symbol:AT2G37510 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
            Gene3D:3.30.70.330 EMBL:AC005896 GO:GO:0003676 HOGENOM:HOG000276232
            HSSP:P11940 EMBL:AY084740 EMBL:BT028941 IPI:IPI00545899 PIR:F84793
            RefSeq:NP_181287.1 UniGene:At.37414 ProteinModelPortal:Q8S8L4
            SMR:Q8S8L4 PRIDE:Q8S8L4 EnsemblPlants:AT2G37510.1 GeneID:818327
            KEGG:ath:AT2G37510 TAIR:At2g37510 eggNOG:NOG305672
            InParanoid:Q8S8L4 OMA:NKTIGWC PhylomeDB:Q8S8L4
            ProtClustDB:CLSN2683075 ArrayExpress:Q8S8L4 Genevestigator:Q8S8L4
            Uniprot:Q8S8L4
        Length = 142

 Score = 116 (45.9 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 31/89 (34%), Positives = 47/89 (52%)

Query:   205 MRRRNDENSVR--VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVN 262
             +RR +   S R  V+ LS  T    L + F  FG +    V  D+ +G S+GFGFV +  
Sbjct:    25 VRRCSTLTSPRLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYAT 84

Query:   263 KEDAQRAINKLNGYGYDNLILRVEWATPR 291
              EDA++A  ++N    D  ++ V+ A PR
Sbjct:    85 IEDAEKAKAEMNAKFLDGWVIFVDPARPR 113


>UNIPROTKB|Q6DEY7 [details] [associations]
            symbol:epabp "Embryonic polyadenylate-binding protein"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0008143 "poly(A) RNA binding"
            evidence=ISS] [GO:0031370 "eukaryotic initiation factor 4G binding"
            evidence=ISS] [GO:0043009 "chordate embryonic development"
            evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
            [GO:0048255 "mRNA stabilization" evidence=ISS] [GO:0060212
            "negative regulation of nuclear-transcribed mRNA poly(A) tail
            shortening" evidence=ISS] InterPro:IPR000504 InterPro:IPR002004
            InterPro:IPR006515 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658
            PROSITE:PS50102 PROSITE:PS51309 SMART:SM00360 SMART:SM00517
            GO:GO:0005737 GO:GO:0000166 GO:GO:0006412 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0043621 GO:GO:0048255 GO:GO:0043009
            eggNOG:COG0724 GO:GO:0060212 GO:GO:0008143 HOVERGEN:HBG002295
            KO:K13126 Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
            GO:GO:0031370 EMBL:BC076956 RefSeq:NP_001005062.1 UniGene:Str.8393
            ProteinModelPortal:Q6DEY7 SMR:Q6DEY7 STRING:Q6DEY7 PRIDE:Q6DEY7
            GeneID:448615 KEGG:xtr:448615 CTD:80336 Xenbase:XB-GENE-5742459
            HOGENOM:HOG000217922 InParanoid:Q6DEY7 OrthoDB:EOG4K6G3V
            Uniprot:Q6DEY7
        Length = 629

 Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 32/79 (40%), Positives = 47/79 (59%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             +V + N  ED  +  L E+F  FG    V V +D  TG SRGFGFVN+ N E+AQ+A+++
Sbjct:   192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKAVSE 250

Query:   273 LNGYGYDNLILRVEWATPR 291
             +NG   +  ++ V  A  R
Sbjct:   251 MNGKEVNGRMIYVGRAQKR 269


>CGD|CAL0005693 [details] [associations]
            symbol:orf19.444 species:5476 "Candida albicans" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 CGD:CAL0005693 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AACQ01000078
            EMBL:AACQ01000077 eggNOG:NOG306795 RefSeq:XP_715879.1
            RefSeq:XP_715929.1 ProteinModelPortal:Q5A297 GeneID:3642415
            GeneID:3642464 KEGG:cal:CaO19.444 KEGG:cal:CaO19.8074
            HOGENOM:HOG000093291 Uniprot:Q5A297
        Length = 145

 Score = 115 (45.5 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 30/79 (37%), Positives = 45/79 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL  D  +  L E F  + ++S+V+V +D+KT  ++GFGFV F   ED   A  ++NG
Sbjct:    60 VGNLGPDGNDELLKEAFSKYPSMSQVHVPIDRKTSKNKGFGFVAFGKSEDYLHAFQEMNG 119

Query:   276 -Y-GYDNLIL-RVEWATPR 291
              Y G   + L R E + P+
Sbjct:   120 KYIGQHPVQLKRAESSVPK 138


>UNIPROTKB|Q5A297 [details] [associations]
            symbol:CaO19.444 "Potential RNA binding protein"
            species:237561 "Candida albicans SC5314" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 CGD:CAL0005693 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AACQ01000078
            EMBL:AACQ01000077 eggNOG:NOG306795 RefSeq:XP_715879.1
            RefSeq:XP_715929.1 ProteinModelPortal:Q5A297 GeneID:3642415
            GeneID:3642464 KEGG:cal:CaO19.444 KEGG:cal:CaO19.8074
            HOGENOM:HOG000093291 Uniprot:Q5A297
        Length = 145

 Score = 115 (45.5 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 30/79 (37%), Positives = 45/79 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL  D  +  L E F  + ++S+V+V +D+KT  ++GFGFV F   ED   A  ++NG
Sbjct:    60 VGNLGPDGNDELLKEAFSKYPSMSQVHVPIDRKTSKNKGFGFVAFGKSEDYLHAFQEMNG 119

Query:   276 -Y-GYDNLIL-RVEWATPR 291
              Y G   + L R E + P+
Sbjct:   120 KYIGQHPVQLKRAESSVPK 138


>UNIPROTKB|Q6DES0 [details] [associations]
            symbol:ncbp2 "Nuclear cap-binding protein subunit 2"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0000340 "RNA
            7-methylguanosine cap binding" evidence=ISS] [GO:0006408 "snRNA
            export from nucleus" evidence=ISS] [GO:0008380 "RNA splicing"
            evidence=ISS] [GO:0045292 "mRNA cis splicing, via spliceosome"
            evidence=ISS] [GO:0046833 "positive regulation of RNA export from
            nucleus" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            InterPro:IPR027157 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0031047 GO:GO:0000340
            GO:GO:0051028 eggNOG:COG0724 GO:GO:0006370 GO:GO:0045292
            HOGENOM:HOG000217589 OrthoDB:EOG470TJG PANTHER:PTHR18847
            HSSP:P52298 KO:K12883 CTD:22916 GO:GO:0046833 GO:GO:0006408
            EMBL:CR761328 EMBL:BC077024 RefSeq:NP_001006879.1 UniGene:Str.170
            ProteinModelPortal:Q6DES0 SMR:Q6DES0 STRING:Q6DES0 PRIDE:Q6DES0
            GeneID:448671 KEGG:xtr:448671 Xenbase:XB-GENE-1005786
            InParanoid:Q6DES0 Bgee:Q6DES0 Uniprot:Q6DES0
        Length = 153

 Score = 115 (45.5 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 25/72 (34%), Positives = 41/72 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NLS  T E  + ELF   G V ++ + +D+    + GF FV +  + DA++A+  +NG
Sbjct:    41 VGNLSFYTTEEQIHELFSKSGDVKKIVMGLDKIKKTACGFCFVEYYTRTDAEQAMRFING 100

Query:   276 YGYDNLILRVEW 287
                D+ I+R +W
Sbjct:   101 TRLDDRIIRTDW 112


>TAIR|locus:2086804 [details] [associations]
            symbol:SCL30A "SC35-like splicing factor 30A"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IGI;RCA;TAS] [GO:0016607 "nuclear speck"
            evidence=IDA] [GO:0008380 "RNA splicing" evidence=NAS] [GO:0005829
            "cytosol" evidence=IDA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=RCA] [GO:0030422 "production of siRNA
            involved in RNA interference" evidence=RCA] [GO:0035196 "production
            of miRNAs involved in gene silencing by miRNA" evidence=RCA]
            [GO:0043687 "post-translational protein modification" evidence=RCA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005829 EMBL:CP002686
            GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0000398 EMBL:AP002038 HSSP:Q61474 HOGENOM:HOG000276233
            KO:K12900 EMBL:AF370268 EMBL:AY063026 IPI:IPI00526651
            RefSeq:NP_187966.1 UniGene:At.23948 ProteinModelPortal:Q9LHP2
            SMR:Q9LHP2 STRING:Q9LHP2 PRIDE:Q9LHP2 EnsemblPlants:AT3G13570.1
            GeneID:820559 KEGG:ath:AT3G13570 TAIR:At3g13570 InParanoid:Q9LHP2
            OMA:KERSYSR PhylomeDB:Q9LHP2 ProtClustDB:CLSN2723371
            ArrayExpress:Q9LHP2 Genevestigator:Q9LHP2 Uniprot:Q9LHP2
        Length = 262

 Score = 132 (51.5 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 27/64 (42%), Positives = 38/64 (59%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             S+ V NL  D R+ DL   F  FG V  +Y+  D  TG  RGFGF+ F++  DA  A ++
Sbjct:    38 SLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQ 97

Query:   273 LNGY 276
             ++GY
Sbjct:    98 MDGY 101


>UNIPROTKB|H7BY16 [details] [associations]
            symbol:NCL "Nucleolin" species:9606 "Homo sapiens"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC017104 HGNC:HGNC:7667
            ChiTaRS:NCL ProteinModelPortal:H7BY16 PRIDE:H7BY16
            Ensembl:ENST00000356936 Bgee:H7BY16 Uniprot:H7BY16
        Length = 297

 Score = 133 (51.9 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 33/90 (36%), Positives = 50/90 (55%)

Query:   202 GTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFV 261
             G+   R     ++ V  LSEDT E  L E F   G+V R  +  D++TG S+GFGFV+F 
Sbjct:   187 GSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSV-RARIVTDRETGSSKGFGFVDFN 243

Query:   262 NKEDAQRAINKLNGYGYDNLILRVEWATPR 291
             ++EDA+ A   +     D   + ++WA P+
Sbjct:   244 SEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 273


>UNIPROTKB|B4DN89 [details] [associations]
            symbol:SRSF2 "Serine/arginine-rich-splicing factor 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:CH471099 EMBL:AC005837 UniGene:Hs.584801 HGNC:HGNC:10783
            ChiTaRS:SRSF2 EMBL:AK297813 IPI:IPI01011463
            ProteinModelPortal:B4DN89 STRING:B4DN89 PRIDE:B4DN89
            Ensembl:ENST00000508921 UCSC:uc010wtg.2 ArrayExpress:B4DN89
            Bgee:B4DN89 Uniprot:B4DN89
        Length = 209

 Score = 128 (50.1 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 30/76 (39%), Positives = 44/76 (57%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             S++V NL+  T    L  +F  +G V  VY+  D+ T  SRGF FV F +K DA+ A++ 
Sbjct:    15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74

Query:   273 LNGYGYDNLILRVEWA 288
             ++G   D   LRV+ A
Sbjct:    75 MDGAVLDGRELRVQMA 90


>UNIPROTKB|H0YBQ4 [details] [associations]
            symbol:PABPC1 "Polyadenylate-binding protein 1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AP001205 HGNC:HGNC:8554 ChiTaRS:PABPC1 Ensembl:ENST00000519596
            Uniprot:H0YBQ4
        Length = 258

 Score = 131 (51.2 bits), Expect = 2.0e-06, P = 2.0e-06
 Identities = 28/69 (40%), Positives = 42/69 (60%)

Query:   207 RRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDA 266
             R  +  +V + N  ED  +  L +LF  FG    V V  D+ +G S+GFGFV+F   EDA
Sbjct:    19 RAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDA 77

Query:   267 QRAINKLNG 275
             Q+A++++NG
Sbjct:    78 QKAVDEMNG 86


>UNIPROTKB|Q9DDU8 [details] [associations]
            symbol:TRA2B "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0048026 "positive regulation of mRNA
            splicing, via spliceosome" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
            GO:GO:0000398 HSSP:Q9V535 GO:GO:0048026 GO:GO:0000381
            HOGENOM:HOG000276232 GeneTree:ENSGT00700000104309 KO:K12897
            OrthoDB:EOG4BVRW2 CTD:6434 eggNOG:NOG297815 OMA:YDDREYY
            EMBL:AADN02024287 EMBL:AF282244 IPI:IPI00571265 RefSeq:NP_990009.1
            UniGene:Gga.4158 SMR:Q9DDU8 Ensembl:ENSGALT00000010555
            GeneID:395403 KEGG:gga:395403 InParanoid:Q9DDU8 NextBio:20815487
            Uniprot:Q9DDU8
        Length = 289

 Score = 132 (51.5 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 33/84 (39%), Positives = 47/84 (55%)

Query:   206 RRRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKE 264
             R   D N  + V  LS  T E DL E+F  +G ++ V +  DQ++  SRGF FV F N E
Sbjct:   111 RANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVE 170

Query:   265 DAQRAINKLNGYGYDNLILRVEWA 288
             DA+ A  + NG   D   +RV+++
Sbjct:   171 DAKEAKERANGMELDGRRIRVDFS 194


>UNIPROTKB|G3V5Z6 [details] [associations]
            symbol:RBM23 "Probable RNA-binding protein 23" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL132780
            EMBL:AL135998 HGNC:HGNC:20155 ChiTaRS:RBM23
            ProteinModelPortal:G3V5Z6 SMR:G3V5Z6 Ensembl:ENST00000555209
            ArrayExpress:G3V5Z6 Bgee:G3V5Z6 Uniprot:G3V5Z6
        Length = 189

 Score = 125 (49.1 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 27/74 (36%), Positives = 42/74 (56%)

Query:   218 NLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYG 277
             N++ED     L  +F PFG +  + +  D  TG S+G+GF+ F + E A+RA+ +LNG+ 
Sbjct:    23 NITEDM----LRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFE 78

Query:   278 YDNLILRVEWATPR 291
                  +RV   T R
Sbjct:    79 LAGRPMRVGHVTER 92


>UNIPROTKB|A4QUF0 [details] [associations]
            symbol:PAB1 "Polyadenylate-binding protein, cytoplasmic and
            nuclear" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR000504 InterPro:IPR002004
            InterPro:IPR006515 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658
            PROSITE:PS50102 PROSITE:PS51309 SMART:SM00360 SMART:SM00517
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0000166
            EMBL:CM001233 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
            GO:GO:0043581 GO:GO:0051028 eggNOG:COG0724 KO:K13126
            Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
            OrthoDB:EOG4QJVWJ RefSeq:XP_003712237.1 ProteinModelPortal:A4QUF0
            SMR:A4QUF0 STRING:A4QUF0 EnsemblFungi:MGG_09505T0 GeneID:2680542
            KEGG:mgr:MGG_09505 Uniprot:A4QUF0
        Length = 762

 Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 29/71 (40%), Positives = 44/71 (61%)

Query:   204 DMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNK 263
             D  + N  N + V N++ +  + +   LF  +G V+   +A DQ+TG SRGFGFVNF + 
Sbjct:   235 DEMKANFTN-IYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSH 293

Query:   264 EDAQRAINKLN 274
             EDA +A+ +LN
Sbjct:   294 EDASKAVQELN 304


>WB|WBGene00000774 [details] [associations]
            symbol:cpf-2 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0016246 "RNA
            interference" evidence=IMP] [GO:0006898 "receptor-mediated
            endocytosis" evidence=IMP] [GO:0040027 "negative regulation of
            vulval development" evidence=IMP] [GO:0016607 "nuclear speck"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0009792 GO:GO:0006898
            GO:GO:0016246 GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330
            GO:GO:0000003 GO:GO:0003676 GO:GO:0040027 eggNOG:COG0724 KO:K14407
            InterPro:IPR025742 InterPro:IPR026896 Pfam:PF14327 Pfam:PF14304
            GeneTree:ENSGT00550000074641 HSSP:P33240 EMBL:Z83230 PIR:T22767
            RefSeq:NP_499734.1 ProteinModelPortal:O45577 SMR:O45577
            DIP:DIP-27144N IntAct:O45577 MINT:MINT-1049050 STRING:O45577
            PaxDb:O45577 EnsemblMetazoa:F56A8.6.1 EnsemblMetazoa:F56A8.6.2
            GeneID:176742 KEGG:cel:CELE_F56A8.6 UCSC:F56A8.6.1 CTD:176742
            WormBase:F56A8.6 HOGENOM:HOG000214372 InParanoid:O45577 OMA:VENPYGE
            NextBio:893824 Uniprot:O45577
        Length = 336

 Score = 133 (51.9 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 34/100 (34%), Positives = 51/100 (51%)

Query:   194 MRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISR 253
             M  G + +G    R   + SV V N+S D  E  +  +F   G V  + +  D++TG  +
Sbjct:     2 MSGGYKSSGVGNDR--SQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPK 59

Query:   254 GFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN 293
             G+GF+ F + + A+ AI  LNGY     ILRV+ A    N
Sbjct:    60 GYGFIEFPDIQTAEVAIRNLNGYELSGRILRVDSAAGGMN 99


>FB|FBgn0085383 [details] [associations]
            symbol:CG34354 species:7227 "Drosophila melanogaster"
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:AE014297 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 GeneTree:ENSGT00680000099967
            KO:K13201 RefSeq:NP_001097953.1 UniGene:Dm.16369
            ProteinModelPortal:A8JPX0 SMR:A8JPX0 EnsemblMetazoa:FBtr0112564
            GeneID:5740528 KEGG:dme:Dmel_CG34354 UCSC:CG34354-RA
            FlyBase:FBgn0085383 InParanoid:A8JPX0 OMA:KDAFTPF OrthoDB:EOG4FFBJQ
            PhylomeDB:A8JPX0 GenomeRNAi:5740528 NextBio:20891566 Bgee:A8JPX0
            Uniprot:A8JPX0
        Length = 525

 Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 29/74 (39%), Positives = 42/74 (56%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V +LS +     L + F PFG +S   V  D +T  S+G+GFV+FV K +A+ AI  +NG
Sbjct:   100 VGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNG 159

Query:   276 YGYDNLILRVEWAT 289
                 +  +R  WAT
Sbjct:   160 QWLGSRSIRTNWAT 173


>UNIPROTKB|P30352 [details] [associations]
            symbol:SRSF2 "Serine/arginine-rich splicing factor 2"
            species:9031 "Gallus gallus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 KO:K12891 CTD:6427
            EMBL:X62446 IPI:IPI00591371 PIR:B42701 RefSeq:NP_001001305.1
            UniGene:Gga.9923 ProteinModelPortal:P30352 SMR:P30352 PRIDE:P30352
            GeneID:396195 KEGG:gga:396195 NextBio:20816247 Uniprot:P30352
        Length = 221

 Score = 128 (50.1 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 30/76 (39%), Positives = 44/76 (57%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             S++V NL+  T    L  +F  +G V  VY+  D+ T  SRGF FV F +K DA+ A++ 
Sbjct:    15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74

Query:   273 LNGYGYDNLILRVEWA 288
             ++G   D   LRV+ A
Sbjct:    75 MDGAVLDGRELRVQMA 90


>UNIPROTKB|Q3MHR5 [details] [associations]
            symbol:SRSF2 "Serine/arginine-rich splicing factor 2"
            species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0008380
            GO:GO:0000166 GO:GO:0016607 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0005681 GO:GO:0003723 HOVERGEN:HBG107480 eggNOG:NOG254270
            GeneTree:ENSGT00700000104403 KO:K12891 EMBL:BC105138
            IPI:IPI00690339 RefSeq:NP_001029490.1 UniGene:Bt.2466
            ProteinModelPortal:Q3MHR5 SMR:Q3MHR5 STRING:Q3MHR5 PRIDE:Q3MHR5
            Ensembl:ENSBTAT00000024299 GeneID:508312 KEGG:bta:508312 CTD:6427
            InParanoid:Q3MHR5 OMA:DHRRRTR OrthoDB:EOG4D26RH NextBio:20868455
            Uniprot:Q3MHR5
        Length = 221

 Score = 128 (50.1 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 30/76 (39%), Positives = 44/76 (57%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             S++V NL+  T    L  +F  +G V  VY+  D+ T  SRGF FV F +K DA+ A++ 
Sbjct:    15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74

Query:   273 LNGYGYDNLILRVEWA 288
             ++G   D   LRV+ A
Sbjct:    75 MDGAVLDGRELRVQMA 90


>UNIPROTKB|E2RDB2 [details] [associations]
            symbol:SRSF2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            GO:GO:0016607 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003676
            GeneTree:ENSGT00700000104403 KO:K12891 OMA:DHRRRTR
            EMBL:AAEX03006277 RefSeq:XP_003639286.1 RefSeq:XP_003639287.1
            ProteinModelPortal:E2RDB2 Ensembl:ENSCAFT00000008286
            GeneID:100856058 KEGG:cfa:100856058 NextBio:20898320 Uniprot:E2RDB2
        Length = 221

 Score = 128 (50.1 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 30/76 (39%), Positives = 44/76 (57%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             S++V NL+  T    L  +F  +G V  VY+  D+ T  SRGF FV F +K DA+ A++ 
Sbjct:    15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74

Query:   273 LNGYGYDNLILRVEWA 288
             ++G   D   LRV+ A
Sbjct:    75 MDGAVLDGRELRVQMA 90


>UNIPROTKB|Q01130 [details] [associations]
            symbol:SRSF2 "Serine/arginine-rich splicing factor 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005681
            "spliceosomal complex" evidence=IEA] [GO:0016605 "PML body"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003714
            "transcription corepressor activity" evidence=NAS] [GO:0016607
            "nuclear speck" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0006397 "mRNA processing" evidence=TAS]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=TAS]
            [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
            from RNA polymerase II promoter" evidence=TAS] [GO:0006369
            "termination of RNA polymerase II transcription" evidence=TAS]
            [GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
            "RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
            evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
            Reactome:REACT_71 InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0003714
            GO:GO:0000166 GO:GO:0016607 Reactome:REACT_1675 Gene3D:3.30.70.330
            GO:GO:0005681 GO:GO:0003723 EMBL:CH471099 GO:GO:0006406
            GO:GO:0000398 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
            HOVERGEN:HBG107480 Reactome:REACT_78 eggNOG:NOG254270 KO:K12891
            CTD:6427 OMA:DHRRRTR EMBL:M90104 EMBL:X62447 EMBL:X75755
            EMBL:BT007250 EMBL:AK124792 EMBL:BC000339 EMBL:BC001303
            EMBL:BC070086 EMBL:L03693 IPI:IPI00005978 RefSeq:NP_001182356.1
            RefSeq:NP_003007.2 UniGene:Hs.584801 PDB:2KN4 PDB:2LEA PDB:2LEB
            PDB:2LEC PDBsum:2KN4 PDBsum:2LEA PDBsum:2LEB PDBsum:2LEC
            ProteinModelPortal:Q01130 SMR:Q01130 IntAct:Q01130
            MINT:MINT-2863034 STRING:Q01130 PhosphoSite:Q01130 DMDM:60416437
            PaxDb:Q01130 PeptideAtlas:Q01130 PRIDE:Q01130 DNASU:6427
            Ensembl:ENST00000359995 Ensembl:ENST00000392485
            Ensembl:ENST00000452355 Ensembl:ENST00000585202 GeneID:6427
            KEGG:hsa:6427 UCSC:uc002jsv.3 GeneCards:GC17M074731 HGNC:HGNC:10783
            MIM:600813 neXtProt:NX_Q01130 PharmGKB:PA35699 InParanoid:Q01130
            ChiTaRS:SRSF2 EvolutionaryTrace:Q01130 GenomeRNAi:6427
            NextBio:24961 ArrayExpress:Q01130 Bgee:Q01130 CleanEx:HS_SFRS2
            Genevestigator:Q01130 GermOnline:ENSG00000161547 Uniprot:Q01130
        Length = 221

 Score = 128 (50.1 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 30/76 (39%), Positives = 44/76 (57%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             S++V NL+  T    L  +F  +G V  VY+  D+ T  SRGF FV F +K DA+ A++ 
Sbjct:    15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74

Query:   273 LNGYGYDNLILRVEWA 288
             ++G   D   LRV+ A
Sbjct:    75 MDGAVLDGRELRVQMA 90


>UNIPROTKB|Q06A98 [details] [associations]
            symbol:SRSF2 "Serine/arginine-rich splicing factor 2"
            species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0008380 GO:GO:0000166 GO:GO:0016607 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 KO:K12891 CTD:6427 EMBL:DQ972966
            RefSeq:NP_001070697.1 UniGene:Ssc.1002 ProteinModelPortal:Q06A98
            SMR:Q06A98 GeneID:768117 KEGG:ssc:768117 Uniprot:Q06A98
        Length = 221

 Score = 128 (50.1 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 30/76 (39%), Positives = 44/76 (57%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             S++V NL+  T    L  +F  +G V  VY+  D+ T  SRGF FV F +K DA+ A++ 
Sbjct:    15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74

Query:   273 LNGYGYDNLILRVEWA 288
             ++G   D   LRV+ A
Sbjct:    75 MDGAVLDGRELRVQMA 90


>MGI|MGI:98284 [details] [associations]
            symbol:Srsf2 "serine/arginine-rich splicing factor 2"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
            [GO:0016607 "nuclear speck" evidence=ISO;IDA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            MGI:MGI:98284 GO:GO:0008380 GO:GO:0000166 GO:GO:0016607
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723
            HOVERGEN:HBG107480 UniGene:Mm.429312 eggNOG:NOG254270
            GeneTree:ENSGT00700000104403 KO:K12891 CTD:6427 OMA:DHRRRTR
            OrthoDB:EOG4D26RH ChiTaRS:SRSF2 EMBL:U14648 EMBL:AF077858
            EMBL:AK086103 EMBL:AK088042 EMBL:AK165670 EMBL:BC005493 EMBL:X98511
            IPI:IPI00121135 PIR:A55335 RefSeq:NP_035488.1 UniGene:Mm.21841
            UniGene:Mm.469331 ProteinModelPortal:Q62093 SMR:Q62093
            DIP:DIP-44831N IntAct:Q62093 STRING:Q62093 PhosphoSite:Q62093
            PaxDb:Q62093 PRIDE:Q62093 Ensembl:ENSMUST00000092404
            Ensembl:ENSMUST00000136914 GeneID:20382 KEGG:mmu:20382
            NextBio:298298 Bgee:Q62093 CleanEx:MM_SFRS2 Genevestigator:Q62093
            GermOnline:ENSMUSG00000034120 Uniprot:Q62093
        Length = 221

 Score = 128 (50.1 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 30/76 (39%), Positives = 44/76 (57%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             S++V NL+  T    L  +F  +G V  VY+  D+ T  SRGF FV F +K DA+ A++ 
Sbjct:    15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74

Query:   273 LNGYGYDNLILRVEWA 288
             ++G   D   LRV+ A
Sbjct:    75 MDGAVLDGRELRVQMA 90


>RGD|1359422 [details] [associations]
            symbol:Srsf2 "serine/arginine-rich splicing factor 2"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005681 "spliceosomal complex" evidence=IEA;ISO]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0016607 "nuclear speck"
            evidence=IEA;ISO] [GO:0016605 "PML body" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1359422 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 HOVERGEN:HBG107480
            eggNOG:NOG254270 GeneTree:ENSGT00700000104403 KO:K12891 CTD:6427
            OrthoDB:EOG4D26RH EMBL:BC058508 IPI:IPI00389420
            RefSeq:NP_001009720.1 UniGene:Rn.136644 ProteinModelPortal:Q6PDU1
            SMR:Q6PDU1 STRING:Q6PDU1 PhosphoSite:Q6PDU1 PRIDE:Q6PDU1
            Ensembl:ENSRNOT00000067739 GeneID:494445 KEGG:rno:494445
            NextBio:697633 ArrayExpress:Q6PDU1 Genevestigator:Q6PDU1
            Uniprot:Q6PDU1
        Length = 221

 Score = 128 (50.1 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 30/76 (39%), Positives = 44/76 (57%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             S++V NL+  T    L  +F  +G V  VY+  D+ T  SRGF FV F +K DA+ A++ 
Sbjct:    15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74

Query:   273 LNGYGYDNLILRVEWA 288
             ++G   D   LRV+ A
Sbjct:    75 MDGAVLDGRELRVQMA 90


>UNIPROTKB|Q6PDU1 [details] [associations]
            symbol:Srsf2 "Serine/arginine-rich splicing factor 2"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:1359422 GO:GO:0005634
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 HOVERGEN:HBG107480 eggNOG:NOG254270
            GeneTree:ENSGT00700000104403 KO:K12891 CTD:6427 OrthoDB:EOG4D26RH
            EMBL:BC058508 IPI:IPI00389420 RefSeq:NP_001009720.1
            UniGene:Rn.136644 ProteinModelPortal:Q6PDU1 SMR:Q6PDU1
            STRING:Q6PDU1 PhosphoSite:Q6PDU1 PRIDE:Q6PDU1
            Ensembl:ENSRNOT00000067739 GeneID:494445 KEGG:rno:494445
            NextBio:697633 ArrayExpress:Q6PDU1 Genevestigator:Q6PDU1
            Uniprot:Q6PDU1
        Length = 221

 Score = 128 (50.1 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 30/76 (39%), Positives = 44/76 (57%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             S++V NL+  T    L  +F  +G V  VY+  D+ T  SRGF FV F +K DA+ A++ 
Sbjct:    15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74

Query:   273 LNGYGYDNLILRVEWA 288
             ++G   D   LRV+ A
Sbjct:    75 MDGAVLDGRELRVQMA 90


>UNIPROTKB|Q8EK89 [details] [associations]
            symbol:SO_0208 "RNA-binding protein" species:211586
            "Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR HSSP:P19339
            HOGENOM:HOG000269562 RefSeq:NP_715849.1 ProteinModelPortal:Q8EK89
            GeneID:1168093 KEGG:son:SO_0208 PATRIC:23520091 OMA:YTGPTMT
            ProtClustDB:CLSK905649 Uniprot:Q8EK89
        Length = 154

 Score = 113 (44.8 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 28/73 (38%), Positives = 42/73 (57%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL     E ++  LF  FG V+ V +  D+KTG  +GFGFV  +++  AQ+A+ KLN 
Sbjct:    68 VGNLPYRVHEGEVKVLFGEFGPVNSVRLVRDRKTGRRKGFGFVE-MSEAGAQKAMVKLND 126

Query:   276 YGYDNLILRVEWA 288
             + +    L+V  A
Sbjct:   127 FNFQERTLKVREA 139


>TIGR_CMR|SO_0208 [details] [associations]
            symbol:SO_0208 "RNA-binding protein" species:211586
            "Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
            evidence=ND] [GO:0003723 "RNA binding" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AE014299 GenomeReviews:AE014299_GR HSSP:P19339
            HOGENOM:HOG000269562 RefSeq:NP_715849.1 ProteinModelPortal:Q8EK89
            GeneID:1168093 KEGG:son:SO_0208 PATRIC:23520091 OMA:YTGPTMT
            ProtClustDB:CLSK905649 Uniprot:Q8EK89
        Length = 154

 Score = 113 (44.8 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 28/73 (38%), Positives = 42/73 (57%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             V NL     E ++  LF  FG V+ V +  D+KTG  +GFGFV  +++  AQ+A+ KLN 
Sbjct:    68 VGNLPYRVHEGEVKVLFGEFGPVNSVRLVRDRKTGRRKGFGFVE-MSEAGAQKAMVKLND 126

Query:   276 YGYDNLILRVEWA 288
             + +    L+V  A
Sbjct:   127 FNFQERTLKVREA 139


>TAIR|locus:2160752 [details] [associations]
            symbol:AT5G06210 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 eggNOG:COG0724 EMBL:AP002544 HOGENOM:HOG000276232
            HSSP:Q61474 EMBL:AY062714 EMBL:AY093349 EMBL:AY087577
            IPI:IPI00530408 RefSeq:NP_196239.1 UniGene:At.27256
            ProteinModelPortal:Q9FFZ6 SMR:Q9FFZ6 STRING:Q9FFZ6 PaxDb:Q9FFZ6
            PRIDE:Q9FFZ6 EnsemblPlants:AT5G06210.1 GeneID:830508
            KEGG:ath:AT5G06210 TAIR:At5g06210 InParanoid:Q9FFZ6 OMA:SDRSKGF
            PhylomeDB:Q9FFZ6 ProtClustDB:CLSN2686837 ArrayExpress:Q9FFZ6
            Genevestigator:Q9FFZ6 Uniprot:Q9FFZ6
        Length = 146

 Score = 113 (44.8 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 26/83 (31%), Positives = 45/83 (54%)

Query:   206 RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKED 265
             +RR   + + +  LS  T E  L E F   G V    + +D+ +  S+GFGFV F + ++
Sbjct:    28 QRRGVASKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADE 87

Query:   266 AQRAINKLNGYGYDNLILRVEWA 288
             AQ+A+ + NG   +   + V++A
Sbjct:    88 AQKALMEFNGQQLNGRTIFVDYA 110


>WB|WBGene00004387 [details] [associations]
            symbol:rnp-4 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006396 "RNA processing"
            evidence=IEA] [GO:0002009 "morphogenesis of an epithelium"
            evidence=IMP] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0040022
            "feminization of hermaphroditic germ-line" evidence=IMP]
            [GO:0009790 "embryo development" evidence=IMP] [GO:0001703
            "gastrulation with mouth forming first" evidence=IMP] [GO:0006898
            "receptor-mediated endocytosis" evidence=IMP] [GO:0040011
            "locomotion" evidence=IMP] [GO:0006915 "apoptotic process"
            evidence=IMP] InterPro:IPR000504 InterPro:IPR008111
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR01738 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
            GO:GO:0006898 GO:GO:0005737 GO:GO:0040007 GO:GO:0006915
            GO:GO:0002119 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0040011
            GO:GO:0003723 GO:GO:0006396 GO:GO:0040035 GO:GO:0040022 HSSP:Q9V535
            eggNOG:COG0724 GeneTree:ENSGT00550000074641 GO:GO:0001703
            EMBL:Z32683 HOGENOM:HOG000183826 KO:K12876 PIR:F88427
            RefSeq:NP_497891.1 ProteinModelPortal:Q21832 SMR:Q21832
            DIP:DIP-26500N IntAct:Q21832 MINT:MINT-1100537 STRING:Q21832
            PaxDb:Q21832 EnsemblMetazoa:R07E5.14.1 EnsemblMetazoa:R07E5.14.2
            EnsemblMetazoa:R07E5.14.3 GeneID:175572 KEGG:cel:CELE_R07E5.14
            UCSC:R07E5.14.2 CTD:175572 WormBase:R07E5.14 InParanoid:Q21832
            OMA:NIHEEAT NextBio:888726 Uniprot:Q21832
        Length = 142

 Score = 113 (44.8 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 20/74 (27%), Positives = 43/74 (58%)

Query:   214 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKL 273
             V VTN+ E+  E D+ + F  +G +  +++ +D++TG  +G+  V +  +++A  AI++ 
Sbjct:    57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116

Query:   274 NGYGYDNLILRVEW 287
             N        ++V+W
Sbjct:   117 NDTDLLGQNVKVDW 130


>SGD|S000003391 [details] [associations]
            symbol:NSR1 "Nucleolar protein that binds nuclear
            localization sequences" species:4932 "Saccharomyces cerevisiae"
            [GO:0003723 "RNA binding" evidence=IEA;IDA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003697 "single-stranded DNA binding"
            evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA;TAS]
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0006950 "response to stress"
            evidence=IEA] [GO:0000028 "ribosomal small subunit assembly"
            evidence=TAS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 SGD:S000003391 GO:GO:0005739
            GO:GO:0005730 GO:GO:0006950 EMBL:BK006941 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0003697 GO:GO:0000028
            GO:GO:0006364 eggNOG:COG0724 EMBL:X85807 KO:K11294 OMA:VITDRES
            OrthoDB:EOG422DTZ GeneTree:ENSGT00550000074656 EMBL:X57185
            EMBL:Z72944 EMBL:Z72946 PIR:A39205 RefSeq:NP_011675.1
            ProteinModelPortal:P27476 SMR:P27476 DIP:DIP-5537N IntAct:P27476
            MINT:MINT-543806 STRING:P27476 PaxDb:P27476 PeptideAtlas:P27476
            EnsemblFungi:YGR159C GeneID:853064 KEGG:sce:YGR159C CYGD:YGR159c
            HOGENOM:HOG000113864 NextBio:973004 Genevestigator:P27476
            GermOnline:YGR159C Uniprot:P27476
        Length = 414

 Score = 134 (52.2 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 34/106 (32%), Positives = 56/106 (52%)

Query:   188 TYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQ 247
             T  P G    A++ G      +D  ++ + NLS +     + ELF   G V  V +    
Sbjct:   245 TSKPAGNNDRAKKFGDTPSEPSD--TLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHP 302

Query:   248 KTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN 293
             +T   +GFG+V F N EDA++A++ L G   DN  +R+++++PR N
Sbjct:   303 ETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFSSPRPN 348


>UNIPROTKB|F8VZY7 [details] [associations]
            symbol:RBFOX1 "RNA-binding protein fox-1 homolog 1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC005774 EMBL:AC006075 EMBL:AC006112 EMBL:AC007012
            EMBL:AC007217 EMBL:AC007222 EMBL:AC007223 EMBL:AC009135
            EMBL:AC022206 EMBL:AC023829 EMBL:AC027683 EMBL:AC079410
            EMBL:AC125796 EMBL:AC131390 HGNC:HGNC:18222 ChiTaRS:RBFOX1
            IPI:IPI01022282 ProteinModelPortal:F8VZY7 SMR:F8VZY7
            Ensembl:ENST00000551752 ArrayExpress:F8VZY7 Bgee:F8VZY7
            Uniprot:F8VZY7
        Length = 263

 Score = 130 (50.8 bits), Expect = 2.7e-06, P = 2.7e-06
 Identities = 37/133 (27%), Positives = 61/133 (45%)

Query:   160 DLAAPAETFIDK-PXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTN 218
             +L  PA+T  ++ P            T+     P       +   +   ++    + V+N
Sbjct:    64 NLYPPAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSN 123

Query:   219 LSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGY 278
             +    R+PDL ++F  FG +  V +  +++ G S+GFGFV F N  DA RA  KL+G   
Sbjct:   124 IPFRFRDPDLRQMFGQFGKILDVEIIFNER-G-SKGFGFVTFENSADADRAREKLHGTVV 181

Query:   279 DNLILRVEWATPR 291
             +   + V  AT R
Sbjct:   182 EGRKIEVNNATAR 194


>TAIR|locus:2023903 [details] [associations]
            symbol:ATE1 "ATPase E1" species:3702 "Arabidopsis
            thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0000166 UniGene:At.66943
            Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HOGENOM:HOG000276232 EMBL:AK228412 IPI:IPI00541371
            RefSeq:NP_563931.2 ProteinModelPortal:Q0WRA3 SMR:Q0WRA3
            STRING:Q0WRA3 PaxDb:Q0WRA3 PRIDE:Q0WRA3 EnsemblPlants:AT1G13690.1
            GeneID:837930 KEGG:ath:AT1G13690 TAIR:At1g13690 InParanoid:Q0WRA3
            OMA:AQPIWAD PhylomeDB:Q0WRA3 ProtClustDB:CLSN2690943
            Genevestigator:Q0WRA3 Uniprot:Q0WRA3
        Length = 177

 Score = 122 (48.0 bits), Expect = 2.8e-06, P = 2.8e-06
 Identities = 27/80 (33%), Positives = 43/80 (53%)

Query:   211 ENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAI 270
             +N++ V  L+++  E  L   F PFG +  V   +DQ     R FGFV F+ +EDA  A+
Sbjct:    12 KNTLYVGGLADEVNESILHAAFIPFGDIKDVKTPLDQANQKHRSFGFVTFLEREDASAAM 71

Query:   271 NKLNGYGYDNLILRVEWATP 290
             + ++G      +L V +A P
Sbjct:    72 DNMDGAELYGRVLTVNYALP 91


>UNIPROTKB|I3L1D4 [details] [associations]
            symbol:RBFOX1 "RNA-binding protein fox-1 homolog 1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC005774 EMBL:AC006075 EMBL:AC006112 EMBL:AC007012
            EMBL:AC007217 EMBL:AC007222 EMBL:AC007223 EMBL:AC009135
            EMBL:AC022206 EMBL:AC023829 EMBL:AC027683 EMBL:AC079410
            EMBL:AC125796 EMBL:AC131390 HGNC:HGNC:18222 ChiTaRS:RBFOX1
            Ensembl:ENST00000570626 Bgee:I3L1D4 Uniprot:I3L1D4
        Length = 189

 Score = 124 (48.7 bits), Expect = 3.0e-06, P = 3.0e-06
 Identities = 33/117 (28%), Positives = 55/117 (47%)

Query:   160 DLAAPAETFIDK-PXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTN 218
             +L  PA+T  ++ P            T+     P       +   +   ++    + V+N
Sbjct:    66 NLYPPAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSN 125

Query:   219 LSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             +    R+PDL ++F  FG +  V +  +++ G S+GFGFV F N  DA RA  KL+G
Sbjct:   126 IPFRFRDPDLRQMFGQFGKILDVEIIFNER-G-SKGFGFVTFENSADADRAREKLHG 180


>SGD|S000004961 [details] [associations]
            symbol:PUB1 "Poly (A)+ RNA-binding protein" species:4932
            "Saccharomyces cerevisiae" [GO:0010494 "cytoplasmic stress granule"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
            [GO:0003729 "mRNA binding" evidence=IMP;IDA] [GO:0043488
            "regulation of mRNA stability" evidence=IMP] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0008266 "poly(U) RNA binding"
            evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0034063
            "stress granule assembly" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            SGD:S000004961 GO:GO:0005634 GO:GO:0008266 GO:GO:0000184
            GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 EMBL:BK006947
            GO:GO:0043488 GO:GO:0010494 GO:GO:0034063 eggNOG:COG0724
            EMBL:L13725 EMBL:L20767 EMBL:L01797 EMBL:Z71292 PIR:S62928
            RefSeq:NP_014382.1 PDB:2LA4 PDB:3MD1 PDB:3MD3 PDBsum:2LA4
            PDBsum:3MD1 PDBsum:3MD3 ProteinModelPortal:P32588 SMR:P32588
            DIP:DIP-5480N IntAct:P32588 MINT:MINT-499485 STRING:P32588
            PaxDb:P32588 PeptideAtlas:P32588 EnsemblFungi:YNL016W GeneID:855716
            KEGG:sce:YNL016W GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748
            KO:K13201 OMA:PAYNTTV OrthoDB:EOG4SN4XJ EvolutionaryTrace:P32588
            NextBio:980072 Genevestigator:P32588 GermOnline:YNL016W
            Uniprot:P32588
        Length = 453

 Score = 134 (52.2 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 28/85 (32%), Positives = 49/85 (57%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             +D  ++ V +L+ +  +  L   F+ F +    +V  D +TG SRG+GFV+F +++DAQ 
Sbjct:   159 DDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQN 218

Query:   269 AINKLNGYGYDNLILRVEWATPRTN 293
             A++ + G   +   LR+ WA  R N
Sbjct:   219 AMDSMQGQDLNGRPLRINWAAKRDN 243


>ASPGD|ASPL0000076347 [details] [associations]
            symbol:AN4505 species:162425 "Emericella nidulans"
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR008111
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR01738 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006396 EMBL:BN001303
            EMBL:AACD01000078 HOGENOM:HOG000183826 KO:K12876 eggNOG:NOG246776
            OrthoDB:EOG4M9523 RefSeq:XP_662109.1 ProteinModelPortal:Q5B4M5
            SMR:Q5B4M5 STRING:Q5B4M5 EnsemblFungi:CADANIAT00005939
            GeneID:2872307 KEGG:ani:AN4505.2 OMA:IEGWIII Uniprot:Q5B4M5
        Length = 158

 Score = 115 (45.5 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 31/113 (27%), Positives = 55/113 (48%)

Query:   191 PPGMRAGAE----RTGTDMRRRNDENSVR--------VTNLSEDTREPDLLELFRPFGAV 238
             PP  +  AE     +GTD R  +   +VR         TN+ E+  E D+ +LF  +G +
Sbjct:     9 PPVSQEQAEPQTSNSGTDARTHDGAVAVRSIEGWIIIATNIHEEASEEDVTDLFAEYGEI 68

Query:   239 SRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 291
                 + +D++TG  +G+  + +    +A  AI +LNG    +  + V++A  R
Sbjct:    69 KNFSLNLDRRTGYVKGYALIEYSTLPEAAEAIKELNGTKLLDQTIEVDYAFVR 121


>DICTYBASE|DDB_G0290307 [details] [associations]
            symbol:DDB_G0290307 "ELAVL1-like protein"
            species:44689 "Dictyostelium discoideum" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            dictyBase:DDB_G0290307 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:AAFI02000162 eggNOG:NOG256997 RefSeq:XP_635793.1
            ProteinModelPortal:Q54G90 EnsemblProtists:DDB0233651 GeneID:8627598
            KEGG:ddi:DDB_G0290307 InParanoid:Q54G90 OMA:SATNQCK Uniprot:Q54G90
        Length = 459

 Score = 134 (52.2 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 40/110 (36%), Positives = 48/110 (43%)

Query:   191 PPGMRAGAERTGTDMRRRNDENSVRVTNLSED----TREPDLLE-LFRPFGAVSRVYVAV 245
             PP        T T        NS    NL       T   D L  +F  FG +    V V
Sbjct:    73 PPTTTTTTTTTMTQTSTSTSSNSANSGNLFISFLPATYTSDTLRSIFSAFGEIDSCRVMV 132

Query:   246 DQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWAT--PRTN 293
             D  TG+SRGFGFV F +   AQ AIN +NG   +N  L V +A   P +N
Sbjct:   133 DLNTGLSRGFGFVKFKDVASAQYAINSMNGAKVENKTLLVRFANSDPNSN 182

 Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 27/66 (40%), Positives = 38/66 (57%)

Query:   210 DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRA 269
             D  ++ V NL  D  +  L  LF P GA++ V +  DQ T + RG+GFV  V+  D+  A
Sbjct:   380 DPTNLYVYNLPSDADDSLLYRLFSPCGAIASVKIVRDQTTQVCRGYGFVRMVSLADSYSA 439

Query:   270 INKLNG 275
             IN +NG
Sbjct:   440 INSING 445


>UNIPROTKB|Q08E07 [details] [associations]
            symbol:CELF3 "CUGBP Elav-like family member 3" species:9913
            "Bos taurus" [GO:0048026 "positive regulation of mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0030317 "sperm motility"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0007283
            "spermatogenesis" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0007283
            GO:GO:0003723 GO:GO:0030317 HOVERGEN:HBG107646 KO:K13207
            GO:GO:0048026 eggNOG:NOG251494 HOGENOM:HOG000004754
            GeneTree:ENSGT00560000076837 EMBL:BC123480 IPI:IPI00690976
            RefSeq:NP_001070313.1 UniGene:Bt.18201 ProteinModelPortal:Q08E07
            SMR:Q08E07 PRIDE:Q08E07 Ensembl:ENSBTAT00000033848 GeneID:513347
            KEGG:bta:513347 CTD:11189 InParanoid:Q08E07 OMA:HSAYLNP
            NextBio:20870823 ArrayExpress:Q08E07 GO:GO:0000381 Uniprot:Q08E07
        Length = 461

 Score = 134 (52.2 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 31/101 (30%), Positives = 53/101 (52%)

Query:   191 PPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTG 250
             PP  +   ++     R   D  ++ + +L ++  + ++L++F PFG V    V VD+ T 
Sbjct:   355 PPPQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATN 414

Query:   251 ISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 291
              S+ FGFV+F N   AQ AI  +NG+      L+V+   P+
Sbjct:   415 QSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK 455


>UNIPROTKB|F1NH82 [details] [associations]
            symbol:F1NH82 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658
            PROSITE:PS50102 PROSITE:PS51309 SMART:SM00360 SMART:SM00517
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 Gene3D:1.10.1900.10
            SUPFAM:SSF63570 GeneTree:ENSGT00640000091232 EMBL:AADN02025122
            EMBL:AADN02025123 EMBL:AADN02025124 IPI:IPI00574035
            Ensembl:ENSGALT00000023332 Uniprot:F1NH82
        Length = 469

 Score = 134 (52.2 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 29/69 (42%), Positives = 42/69 (60%)

Query:   207 RRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDA 266
             R  +  +V + N  ED  +  L ELF  FG    V V  D+ +G S+GFGFV+F   EDA
Sbjct:    18 RAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDA 76

Query:   267 QRAINKLNG 275
             Q+A++++NG
Sbjct:    77 QKAVDEMNG 85


>ZFIN|ZDB-GENE-030131-2420 [details] [associations]
            symbol:srsf2b "serine/arginine-rich splicing
            factor 2b" species:7955 "Danio rerio" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-2420
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HSSP:P19339
            HOVERGEN:HBG107480 eggNOG:NOG254270 GeneTree:ENSGT00700000104403
            HOGENOM:HOG000276233 OrthoDB:EOG4D26RH EMBL:CU463857 EMBL:BC065971
            IPI:IPI00484778 UniGene:Dr.77943 SMR:Q6NZT9 STRING:Q6NZT9
            Ensembl:ENSDART00000017706 Ensembl:ENSDART00000105586
            InParanoid:Q6NZT9 OMA:YVEMESA Uniprot:Q6NZT9
        Length = 220

 Score = 127 (49.8 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 30/76 (39%), Positives = 44/76 (57%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             S++V NL+  T    L  +F  +G V  VY+  D+ T  SRGF FV F +K DA+ A++ 
Sbjct:    15 SLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74

Query:   273 LNGYGYDNLILRVEWA 288
             ++G   D   LRV+ A
Sbjct:    75 MDGAILDGRELRVQMA 90


>UNIPROTKB|I3LBN9 [details] [associations]
            symbol:TRA2B "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0048026 "positive regulation of mRNA splicing, via
            spliceosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
            GO:GO:0000398 GO:GO:0048026 GO:GO:0000381
            GeneTree:ENSGT00700000104309 OMA:YDDREYY Ensembl:ENSSSCT00000025696
            Uniprot:I3LBN9
        Length = 280

 Score = 130 (50.8 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 32/84 (38%), Positives = 47/84 (55%)

Query:   206 RRRNDENS-VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKE 264
             R   D N  + V  LS  T E DL E+F  +G ++ V +  DQ++  SRGF FV F N +
Sbjct:   103 RANPDPNCCLGVFGLSLYTTESDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 162

Query:   265 DAQRAINKLNGYGYDNLILRVEWA 288
             DA+ A  + NG   D   +RV+++
Sbjct:   163 DAKEAKERANGMELDGRRIRVDFS 186


>DICTYBASE|DDB_G0279695 [details] [associations]
            symbol:DDB_G0279695 "RNA recognition motif-containing
            protein RRM" species:44689 "Dictyostelium discoideum" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            dictyBase:DDB_G0279695 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:AAFI02000032 eggNOG:COG0724
            ProtClustDB:CLSZ2430003 RefSeq:XP_641604.1
            ProteinModelPortal:Q54WE9 PRIDE:Q54WE9 EnsemblProtists:DDB0233747
            GeneID:8622181 KEGG:ddi:DDB_G0279695 InParanoid:Q54WE9 OMA:HEMDGRQ
            Uniprot:Q54WE9
        Length = 84

 Score = 112 (44.5 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 25/62 (40%), Positives = 36/62 (58%)

Query:   232 FRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 291
             F  FG VS  YV +D+ T  S+GFGFV F N E AQ A+N ++      L++ + +   +
Sbjct:    23 FSKFGPVSDGYVVLDRITKRSKGFGFVTFDNAESAQNAVNSVHEMDGRQLVVNLAFDKLK 82

Query:   292 TN 293
             TN
Sbjct:    83 TN 84


>UNIPROTKB|H3BPI5 [details] [associations]
            symbol:PABPC3 "Polyadenylate-binding protein 3"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AL359757 HGNC:HGNC:8556 ProteinModelPortal:H3BPI5 SMR:H3BPI5
            Ensembl:ENST00000562709 Bgee:H3BPI5 Uniprot:H3BPI5
        Length = 255

 Score = 129 (50.5 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 28/69 (40%), Positives = 42/69 (60%)

Query:   207 RRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDA 266
             R  +  +V + N  ED  +  L +LF  FG    V V  D+ +G S+GFGFV+F   EDA
Sbjct:   186 RAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDA 244

Query:   267 QRAINKLNG 275
             Q+A++++NG
Sbjct:   245 QKAVDEMNG 253


>UNIPROTKB|E9PTI5 [details] [associations]
            symbol:E9PTI5 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00550000074656 IPI:IPI01007589
            Ensembl:ENSRNOT00000011480 Uniprot:E9PTI5
        Length = 567

 Score = 135 (52.6 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 33/90 (36%), Positives = 50/90 (55%)

Query:   202 GTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFV 261
             G+   R     ++ V  LSEDT E  L E F   G+V R  +  D++TG S+GFGFV+F 
Sbjct:   419 GSPNARSQPSKTLFVKGLSEDTTEETLKESFE--GSV-RARIVTDRETGSSKGFGFVDFN 475

Query:   262 NKEDAQRAINKLNGYGYDNLILRVEWATPR 291
             ++EDA+ A   +     D   + ++WA P+
Sbjct:   476 SEEDAKTAKEAMEDGEIDGNKVTLDWAKPK 505


>CGD|CAL0000019 [details] [associations]
            symbol:orf19.1646 species:5476 "Candida albicans" [GO:0030686
            "90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
            mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IEA] [GO:0034462 "small-subunit processome assembly"
            evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
            separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
            rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
            [GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
            rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 CGD:CAL0000019 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0030529 EMBL:AACQ01000014
            EMBL:AACQ01000013 GO:GO:0006364 RefSeq:XP_721604.1
            RefSeq:XP_721723.1 ProteinModelPortal:Q5AJS6 STRING:Q5AJS6
            GeneID:3636592 GeneID:3636694 KEGG:cal:CaO19.1646
            KEGG:cal:CaO19.9215 eggNOG:NOG323716 KO:K14787 Uniprot:Q5AJS6
        Length = 841

 Score = 137 (53.3 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 26/70 (37%), Positives = 42/70 (60%)

Query:   216 VTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNG 275
             + N+S +  E D   LF  +GA+  V++A+D +TG S+GF +V F+ KEDA RA   L+ 
Sbjct:   314 IRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRSLDK 373

Query:   276 YGYDNLILRV 285
               +   +L +
Sbjct:   374 QIFQGRLLHI 383


>UNIPROTKB|G4NFS0 [details] [associations]
            symbol:MGG_08741 "tRNA selenocysteine-associated protein 1"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:CM001236 RefSeq:XP_003719244.1
            EnsemblFungi:MGG_08741T0 GeneID:2679034 KEGG:mgr:MGG_08741
            Uniprot:G4NFS0
        Length = 415

 Score = 133 (51.9 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 33/91 (36%), Positives = 49/91 (53%)

Query:   204 DMR-RRNDENSVRVTNLSEDTREPDLLELFRP-FGAVSRVYVAVDQKTGISRGFGFVNFV 261
             D R  R  E S+ V +L  +  E  L+ LF+  F +     +  D  TG SRG+GFV F 
Sbjct:   131 DRRDERGPEYSIFVGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAMTGQSRGYGFVRFT 190

Query:   262 NKEDAQRAINKLNGYGYDNLILRVEWATPRT 292
             ++ D QRA+ ++ G    N  +R+  ATP+T
Sbjct:   191 DESDQQRALVEMQGVYCGNRPMRISTATPKT 221


>UNIPROTKB|B4DQL3 [details] [associations]
            symbol:CELF3 "CUGBP Elav-like family member 3" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG107646
            HOGENOM:HOG000004754 EMBL:AL589765 UniGene:Hs.26047 HGNC:HGNC:11967
            EMBL:AK298852 IPI:IPI00909704 SMR:B4DQL3 STRING:B4DQL3
            Ensembl:ENST00000392706 UCSC:uc010pdh.2 Uniprot:B4DQL3
        Length = 260

 Score = 129 (50.5 bits), Expect = 3.5e-06, P = 3.5e-06
 Identities = 31/103 (30%), Positives = 55/103 (53%)

Query:   191 PPGMRAGAERTGTDMRRRN--DENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQK 248
             PP  +   ++     ++R   D  ++ + +L ++  + ++L++F PFG V    V VD+ 
Sbjct:   152 PPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRA 211

Query:   249 TGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 291
             T  S+ FGFV+F N   AQ AI  +NG+      L+V+   P+
Sbjct:   212 TNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK 254


>WB|WBGene00001340 [details] [associations]
            symbol:etr-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
            "body morphogenesis" evidence=IMP] [GO:0048477 "oogenesis"
            evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040011
            "locomotion" evidence=IMP] [GO:0040002 "collagen and
            cuticulin-based cuticle development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0006915 "apoptotic process"
            evidence=IMP] [GO:0061199 "striated muscle contraction involved in
            embryonic body morphogenesis" evidence=IMP] [GO:0008340
            "determination of adult lifespan" evidence=IMP] [GO:0005634
            "nucleus" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0008340
            GO:GO:0009792 GO:GO:0018991 GO:GO:0006915 GO:GO:0002119
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0010171 GO:GO:0040011
            GO:GO:0048477 GO:GO:0003676 GO:GO:0040002 KO:K13207
            HOGENOM:HOG000004754 GeneTree:ENSGT00560000076837 EMBL:FO081419
            UniGene:Cel.5079 GeneID:173401 KEGG:cel:CELE_T01D1.2
            UCSC:T01D1.2a.1 CTD:173401 NextBio:879497 RefSeq:NP_001122631.1
            ProteinModelPortal:A8DYS0 SMR:A8DYS0 IntAct:A8DYS0 STRING:A8DYS0
            EnsemblMetazoa:T01D1.2f.1 EnsemblMetazoa:T01D1.2f.2
            EnsemblMetazoa:T01D1.2f.3 EnsemblMetazoa:T01D1.2f.4
            EnsemblMetazoa:T01D1.2f.5 EnsemblMetazoa:T01D1.2f.6
            WormBase:T01D1.2f InParanoid:A8DYS0 ArrayExpress:A8DYS0
            Uniprot:A8DYS0
        Length = 588

 Score = 135 (52.6 bits), Expect = 3.5e-06, P = 3.5e-06
 Identities = 29/98 (29%), Positives = 53/98 (54%)

Query:   196 AGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGF 255
             + A+  G    +  D  ++ + +L +D  + DL+  F PFG +    V +D+ T +S+ F
Sbjct:   487 SAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCF 546

Query:   256 GFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN 293
             GFV++ N + A  AI+ +NG+   +  L+V+    R N
Sbjct:   547 GFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDRGN 584


>UNIPROTKB|I3LQ36 [details] [associations]
            symbol:I3LQ36 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 EMBL:CU210877
            Ensembl:ENSSSCT00000005974 Uniprot:I3LQ36
        Length = 161

 Score = 116 (45.9 bits), Expect = 3.6e-06, P = 3.6e-06
 Identities = 28/80 (35%), Positives = 41/80 (51%)

Query:   209 NDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQR 268
             ++E  + V  L+ +T E  L + F  FG +  V V  D +T  S+GFGF+ F N E A  
Sbjct:     3 SEEGKLFVGGLNFNTYEQALEDHFSSFGPIFEVVVVKDWETRRSQGFGFITFTNPEHASN 62

Query:   269 AINKLNGYGYDNLILRVEWA 288
             A+   NG   D   + V+ A
Sbjct:    63 AMRATNGESLDGRQIHVDHA 82


>ZFIN|ZDB-GENE-040426-2706 [details] [associations]
            symbol:srsf2a "serine/arginine-rich splicing
            factor 2a" species:7955 "Danio rerio" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-040426-2706
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HSSP:P19339
            HOVERGEN:HBG107480 eggNOG:NOG254270 GeneTree:ENSGT00700000104403
            HOGENOM:HOG000276233 KO:K12891 OrthoDB:EOG4D26RH OMA:SAPPRRY
            EMBL:CR352342 EMBL:BC046045 IPI:IPI00482409 RefSeq:NP_998547.1
            UniGene:Dr.76609 SMR:Q7ZV13 STRING:Q7ZV13
            Ensembl:ENSDART00000080173 GeneID:406691 KEGG:dre:406691 CTD:406691
            InParanoid:Q7ZV13 NextBio:20818218 Uniprot:Q7ZV13
        Length = 225

 Score = 127 (49.8 bits), Expect = 3.6e-06, P = 3.6e-06
 Identities = 30/76 (39%), Positives = 44/76 (57%)

Query:   213 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINK 272
             S++V NL+  T    L  +F  +G V  VY+  D+ T  SRGF FV F +K DA+ A++ 
Sbjct:    15 SLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74

Query:   273 LNGYGYDNLILRVEWA 288
             ++G   D   LRV+ A
Sbjct:    75 MDGALLDGRELRVQMA 90

WARNING:  HSPs involving 441 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.134   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      293       263   0.00091  114 3  11 22  0.38    34
                                                     32  0.49    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  691
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  193 KB (2109 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.66u 0.10s 19.76t   Elapsed:  00:00:01
  Total cpu time:  19.68u 0.10s 19.78t   Elapsed:  00:00:01
  Start:  Fri May 10 16:19:12 2013   End:  Fri May 10 16:19:13 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with EIF3G2 EIF3G2 EIF3G2 AT5G06000	protein from Arabidopsis thaliana	3.1e-90
BLAST match view associations BLAST with EIF3G1 EIF3G1 EIF3G1 AT3G11400	protein from Arabidopsis thaliana	4.8e-71
BLAST match view associations BLAST with eif3g eif3g eif3g Eukaryotic translation initiation factor 3 subunit G	protein from Xenopus (Silurana) tropicalis	1.2e-47
BLAST match view associations BLAST with eif3g-a eif3g-a eif3g-a Eukaryotic translation initiation factor 3 subunit G-A	protein from Xenopus laevis	3.3e-47
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Bos taurus	6.9e-47
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Canis lupus familiaris	6.9e-47
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Homo sapiens	6.9e-47
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Sus scrofa	6.9e-47
BLAST match view associations BLAST with Eif3g Eif3g Eif3g eukaryotic translation initiation factor 3, subunit G	protein from Mus musculus	6.9e-47
BLAST match view associations BLAST with eif3g-b eif3g-b eif3g-b Eukaryotic translation initiation factor 3 subunit G-B	protein from Xenopus laevis	8.8e-47
BLAST match view associations BLAST with Eif3g Eif3g Eif3g eukaryotic translation initiation factor 3, subunit G	gene from Rattus norvegicus	1.1e-46
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Bos taurus	1.4e-46
BLAST match view associations BLAST with eif3g eif3g eif3g eukaryotic translation initiation factor 3, subunit G	gene_product from Danio rerio	2.3e-46
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Homo sapiens	1.2e-40
BLAST match view associations BLAST with CG8636 CG8636 CG8636	protein from Drosophila melanogaster	2.3e-39
BLAST match view associations BLAST with TIF35 TIF35 TIF35 Eukaryotic translation initiation factor 3 subunit G	protein from Magnaporthe oryzae 70-15	1.7e-38
BLAST match view associations BLAST with CG10881 CG10881 CG10881	protein from Drosophila melanogaster	3.9e-37
BLAST match view associations BLAST with TIF35 TIF35 TIF35	gene_product from Candida albicans	5.4e-31
BLAST match view associations BLAST with eif-3.G eif-3.G eif-3.G	gene from Caenorhabditis elegans	7.6e-29
BLAST match view associations BLAST with TIF35 TIF35 TIF35 eIF3g subunit of the eukaryotic translation initiation factor 3 (eIF3)	gene from Saccharomyces cerevisiae	1.5e-28
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Homo sapiens	1.2e-26
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Homo sapiens	3.6e-25
BLAST match view associations BLAST with EIF3G EIF3G EIF3G Eukaryotic translation initiation factor 3 subunit G	protein from Homo sapiens	5.6e-25
BLAST match view associations BLAST with eif3G eif3G eif3G eukaryotic translation initiation factor 3 (eIF3) subunit G	gene from Dictyostelium discoideum	6.9e-23
BLAST match view associations BLAST with MAL8P1.83 MAL8P1.83 MAL8P1.83 eukaryotictranslation initiation factor, putative	gene from Plasmodium falciparum	4.1e-21
BLAST match view associations BLAST with MAL8P1.83 MAL8P1.83 MAL8P1.83 Eukaryotic translation initiation factor 3 subunit G	protein from Plasmodium falciparum 3D7	4.1e-21
BLAST match view associations BLAST with zgc:112425 zgc:112425 zgc:112425	gene_product from Danio rerio	5.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Gallus gallus	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Gallus gallus	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Gallus gallus	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Canis lupus familiaris	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Canis lupus familiaris	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Sus scrofa	9.7e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Pongo abelii	9.7e-11
BLAST match view associations BLAST with rbm8A rbm8A rbm8A RNA-binding motif protein 8A	gene from Dictyostelium discoideum	1.3e-10
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	1.7e-10
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Cricetulus griseus	1.7e-10
BLAST match view associations BLAST with cirbp-b cirbp-b cirbp-b Cold-inducible RNA-binding protein B	protein from Xenopus laevis	1.7e-10
BLAST match view associations BLAST with Cirbp Cirbp Cirbp cold inducible RNA binding protein	protein from Mus musculus	1.7e-10
BLAST match view associations BLAST with Cirbp Cirbp Cirbp cold inducible RNA binding protein	gene from Rattus norvegicus	1.7e-10
BLAST match view associations BLAST with TIA1 TIA1 TIA1 Nucleolysin TIA-1 isoform p40	protein from Homo sapiens	4.5e-10
BLAST match view associations BLAST with TRA2A TRA2A TRA2A Transformer-2 protein homolog alpha	protein from Homo sapiens	4.9e-10
BLAST match view associations BLAST with TRA2A TRA2A TRA2A cDNA FLJ50689, highly similar to Transformer-2 protein homolog	protein from Homo sapiens	4.9e-10
BLAST match view associations BLAST with cirbp cirbp cirbp cold inducible RNA binding protein	gene_product from Danio rerio	5.6e-10
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Bos taurus	5.8e-10
BLAST match view associations BLAST with cirbp cirbp cirbp Cold-inducible RNA-binding protein	protein from Xenopus (Silurana) tropicalis	6.3e-10
BLAST match view associations BLAST with R09B3.3 R09B3.3 R09B3.3	gene from Caenorhabditis elegans	1.1e-09
BLAST match view associations BLAST with R09B3.3 R09B3.3 R09B3.3 Protein R09B3.3	protein from Caenorhabditis elegans	1.1e-09
BLAST match view associations BLAST with cirbp cirbp cirbp Cold-inducible RNA-binding protein	protein from Rana catesbeiana	1.4e-09
BLAST match view associations BLAST with TRA2A TRA2A TRA2A Uncharacterized protein	protein from Gallus gallus	2.4e-09
BLAST match view associations BLAST with cirbp-a cirbp-a cirbp-a Cold-inducible RNA-binding protein A	protein from Xenopus laevis	2.4e-09
BLAST match view associations BLAST with AT3G14100 AT3G14100 AT3G14100	protein from Arabidopsis thaliana	2.4e-09
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	3.1e-09
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	3.1e-09
BLAST match view associations BLAST with RBM3 RBM3 RBM3 Uncharacterized protein	protein from Sus scrofa	5.2e-09
BLAST match view associations BLAST with CIRBP CIRBP CIRBP cDNA FLJ52850, moderately similar to Cold-inducible RNA-binding protein	protein from Homo sapiens	5.4e-09
BLAST match view associations BLAST with fne fne fne found in neurons	protein from Drosophila melanogaster	6.3e-09
BLAST match view associations BLAST with F6RBQ9 F6RBQ9 F6RBQ9 Uncharacterized protein	protein from Bos taurus	6.7e-09
BLAST match view associations BLAST with RBM3 RBM3 RBM3 Uncharacterized protein	protein from Canis lupus familiaris	6.7e-09
BLAST match view associations BLAST with elav elav elav embryonic lethal abnormal vision	protein from Drosophila melanogaster	6.9e-09
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	8.7e-09
BLAST match view associations BLAST with Rbm3 Rbm3 Rbm3 RNA binding motif protein 3	protein from Mus musculus	8.8e-09
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 Uncharacterized protein	protein from Gallus gallus	9.3e-09
BLAST match view associations BLAST with UBP1A UBP1A UBP1A AT1G54080	protein from Arabidopsis thaliana	9.5e-09
BLAST match view associations BLAST with PAB2 PAB2 PAB2 AT4G34110	protein from Arabidopsis thaliana	1.1e-08
BLAST match view associations BLAST with PF14_0057 PF14_0057 PF14_0057 RNA binding protein, putative	gene from Plasmodium falciparum	1.1e-08
BLAST match view associations BLAST with RBM3 RBM3 RBM3 Putative RNA-binding protein 3	protein from Homo sapiens	1.1e-08
BLAST match view associations BLAST with PF14_0057 PF14_0057 PF14_0057 RNA binding protein, putative	protein from Plasmodium falciparum 3D7	1.1e-08
BLAST match view associations BLAST with elavl4 elavl4 elavl4 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	gene_product from Danio rerio	1.1e-08
BLAST match view associations BLAST with TIA1 TIA1 TIA1 Uncharacterized protein	protein from Bos taurus	1.3e-08
BLAST match view associations BLAST with TIA1 TIA1 TIA1 Nucleolysin TIA-1 isoform p40	protein from Homo sapiens	1.3e-08
BLAST match view associations BLAST with TIA1 TIA1 TIA1 Nucleolysin TIA-1 isoform p40	protein from Homo sapiens	1.3e-08
BLAST match view associations BLAST with Tia1 Tia1 Tia1 cytotoxic granule-associated RNA binding protein 1	protein from Mus musculus	1.3e-08
BLAST match view associations BLAST with Rbp9 Rbp9 Rbp9 RNA-binding protein 9	protein from Drosophila melanogaster	1.3e-08
BLAST match view associations BLAST with TIA1 TIA1 TIA1 Uncharacterized protein	protein from Canis lupus familiaris	1.4e-08
BLAST match view associations BLAST with tia1l tia1l tia1l cytotoxic granule-associated RNA binding protein 1, like	gene_product from Danio rerio	2.3e-08
BLAST match view associations BLAST with Rbm3 Rbm3 Rbm3 RNA binding motif (RNP1, RRM) protein 3	gene from Rattus norvegicus	2.5e-08
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 ELAV-like 1 (Hu antigen R)	protein from Sus scrofa	2.7e-08
BLAST match view associations BLAST with tra2a tra2a tra2a transformer-2 alpha	gene_product from Danio rerio	2.7e-08
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 ELAV (Embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	protein from Bos taurus	3.6e-08
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 Uncharacterized protein	protein from Gallus gallus	3.6e-08
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 ELAV-like protein 1	protein from Homo sapiens	3.6e-08
BLAST match view associations BLAST with Elavl1 Elavl1 Elavl1 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)	protein from Mus musculus	3.6e-08
BLAST match view associations BLAST with Elavl1 Elavl1 Elavl1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	gene from Rattus norvegicus	3.6e-08
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 ELAV (Embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	protein from Bos taurus	3.6e-08
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 Uncharacterized protein	protein from Canis lupus familiaris	3.6e-08
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 ELAV-like protein 4	protein from Homo sapiens	3.7e-08
BLAST match view associations BLAST with Elavl4 Elavl4 Elavl4 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4	gene from Rattus norvegicus	3.7e-08