Citrus Sinensis ID: 022742

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290---
MSVSTQNPTQPKLRWSELDEEDGEDLDFLLPPKQVIGPDENGVKKVIEYKFNDDGNKVKITTTTRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPAASETAAAAAGATKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN
cccccccccccccccccccccccccccccccccCEEccccccEEEEEEEEEcccccEEEEEEEEEEEEEEEEEEcHHHHHHccccccccccccccccccEEEEcccEEEEEccccccccHHHHHHccHHHHHcccccEEEEEEEccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccEEEEccccccccHHHHHHHHcccccccEEEEEEcccccccccEEEEEEccHHHHHHHHHHHcccccccEEEEEEEcccccc
****************ELDEEDGEDLDFLLPPKQVIGPDENGVKKVIEYKFNDDGNKVKITTTTRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILL**********************LGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAP************************************************SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWA*****
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MSVSTQNPTQPKLRWSELDEEDGEDLDFLLPPKQVIGPDENGVKKVIEYKFNDDGNKVKITTTTRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPAASETAAAAAGATKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPRTN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Eukaryotic translation initiation factor 3 subunit G Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. This subunit can bind 18S rRNA.probableC8V330
Eukaryotic translation initiation factor 3 subunit G Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. This subunit can bind 18S rRNA.probableA2R7Z2
Eukaryotic translation initiation factor 3 subunit G Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. This subunit can bind 18S rRNA.probableQ2U002

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3SMZ, chain A
Confidence level:very confident
Coverage over the Query: 126-164,176-292
View the alignment between query and template
View the model in PyMOL