BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022743
(292 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SDW0|TGT3A_ARATH Trihelix transcription factor GT-3a OS=Arabidopsis thaliana
GN=GT-3A PE=1 SV=1
Length = 323
Score = 229 bits (585), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/267 (53%), Positives = 182/267 (68%), Gaps = 19/267 (7%)
Query: 43 DRFPQWSVQETKEFLVIRAELDRSFMETKRNKLLWEVISTRMREKGYNRSAEQCKCKWKN 102
+R PQWS++ETKE L IR ELD++FMETKRNKLLWEV++ +M +KG+ RSAEQCK KWKN
Sbjct: 47 ERIPQWSIEETKELLAIREELDQTFMETKRNKLLWEVVAAKMADKGFVRSAEQCKSKWKN 106
Query: 103 LVTRYKGCETTEPEAMRQQFPFYNELQAIFASRMQRMLWAETEGGSKKKAAAAVQLSS-- 160
LVTRYK CETTEP+A+RQQFPFYNE+Q+IF +RMQRMLW+E S Q SS
Sbjct: 107 LVTRYKACETTEPDAIRQQFPFYNEIQSIFEARMQRMLWSEATEPSTSSKRKHHQFSSDD 166
Query: 161 -------EEEDFNEE---------SEGEKGNVMRKKKKSKSSTGGAG-ASGSGSASSSHN 203
+D NEE E E K + G G ASG+ + ++ +
Sbjct: 167 EEEEVDEPNQDINEELLSLVETQKRETEVITTSTSTNPRKRAKKGKGVASGTKAETAGNT 226
Query: 204 FKEILEEFMKQQMQMEMQWREAFEARENERRIKEMEWRQTMEALENERIMMDRRLREREE 263
K+ILEEFM+Q ++ME +WR+A+E +E ER +E EWR+ M LE ER +RR EREE
Sbjct: 227 LKDILEEFMRQTVKMEKEWRDAWEMKEIEREKREKEWRRRMAELEEERAATERRWMEREE 286
Query: 264 QRRMREEARAEKRDALITALLNKLRRE 290
+RR+REEARA+KRD+LI ALLN+L R+
Sbjct: 287 ERRLREEARAQKRDSLIDALLNRLNRD 313
>sp|O80450|TGT3B_ARATH Trihelix transcription factor GT-3b OS=Arabidopsis thaliana
GN=GT-3B PE=1 SV=1
Length = 289
Score = 222 bits (565), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 147/299 (49%), Positives = 189/299 (63%), Gaps = 46/299 (15%)
Query: 10 HHHHHHQQQQIHQQQQQQHLQHPPHISVNVDTSDRFPQWSVQETKEFLVIRAELDRSFME 69
+ HH H Q Q P I+ V DRFPQWSV+ETKE + IR ELD++FME
Sbjct: 16 NKHHLHTQSQT------------PEIASPVAVGDRFPQWSVEETKELIGIRGELDQTFME 63
Query: 70 TKRNKLLWEVISTRMREKGYNRSAEQCKCKWKNLVTRYKGCETTEPEAMRQQFPFYNELQ 129
TKRNKLLWEVIS +MR+K + RS EQCKCKWKNLVTR+KGCET E E RQQFPFY+++Q
Sbjct: 64 TKRNKLLWEVISNKMRDKSFPRSPEQCKCKWKNLVTRFKGCETMEAETARQQFPFYDDMQ 123
Query: 130 AIFASRMQRMLWA------------------ETEGGSKKKAAAAVQLSSEEEDFNEESEG 171
IF +RMQRMLWA ++ + V +S++ + N
Sbjct: 124 NIFTTRMQRMLWAESEGGGGGTSGAARKREYSSDEEEENVNEELVDVSNDPKILN----- 178
Query: 172 EKGNVMRKKKKSKSSTGGAGASGSGSASSSHNFKEILEEFMKQQMQMEMQWREAFEAREN 231
K N+ +K+K + S++S++ +E+LEEFM+ Q++ME +WRE +EARE
Sbjct: 179 PKKNIAKKRKGGSN-----------SSNSNNGVREVLEEFMRHQVRMESEWREGWEAREK 227
Query: 232 ERRIKEMEWRQTMEALENERIMMDRRLREREEQRRMREEARAEKRDALITALLNKLRRE 290
ER KE EWR+ ME LE ER+ M+R R+REEQRR REE RAEKRD+LI ALL KL R+
Sbjct: 228 ERAEKEEEWRRKMEELEKERLAMERMWRDREEQRRSREEMRAEKRDSLINALLAKLTRD 286
>sp|Q9LU92|TGT4_ARATH Trihelix transcription factor GT-4 OS=Arabidopsis thaliana GN=GT-4
PE=2 SV=1
Length = 372
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 48 WSVQETKEFLVIRAELDRSFMETKRNKLLWEVISTRMREKGYNRSAEQCKCKWKNLVTRY 107
W+ ET+ + +R E+D F +K NK LWE IS +MREKG++RS C KW+N++ +
Sbjct: 55 WAQDETRTLISLRREMDNLFNTSKSNKHLWEQISKKMREKGFDRSPSMCTDKWRNILKEF 114
Query: 108 KGCETTEPEAM---RQQFPFYNELQAIFASRMQRMLWAETEGGSKKKAA 153
K + E +A + +YNE++ IF R +++ + ++ + +A
Sbjct: 115 KKAKQHEDKATSGGSTKMSYYNEIEDIFRERKKKVAFYKSPATTTPSSA 163
>sp|Q9FX53|TGT1_ARATH Trihelix transcription factor GT-1 OS=Arabidopsis thaliana GN=GT-1
PE=1 SV=1
Length = 406
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%)
Query: 48 WSVQETKEFLVIRAELDRSFMETKRNKLLWEVISTRMREKGYNRSAEQCKCKWKNLVTRY 107
W ET+ ++ R +D F +K NK LWE IS++MREKG++RS C KW+NL+ +
Sbjct: 87 WVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEF 146
Query: 108 KGCETTEPEAMRQQFPFYNELQAIFASRMQRM 139
K + + + +Y E++ I R +++
Sbjct: 147 KKAKHHDRGNGSAKMSYYKEIEDILRERSKKV 178
>sp|B2KFW1|ZSC20_MOUSE Zinc finger and SCAN domain-containing protein 20 OS=Mus musculus
GN=Zscan20 PE=2 SV=2
Length = 1030
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 48 WSVQETKEFLVIRAELDRS--FMETKRNKLLWEVISTRMREKGYNRSAEQCKCKWKNLVT 105
W +ETK FL I +E S +N+ ++ I+ R+R +G+ R+ EQC+ + KNL+
Sbjct: 318 WGYEETKTFLAILSESPFSEKLQTCHQNRQVYRAIAERLRARGFLRTLEQCRYRVKNLLR 377
Query: 106 RYKGCETTEPEAMRQQFPFYNELQAIFASRMQRMLWAETEGGSKKKAAAAVQLSSEEEDF 165
Y+ + + P PFY EL+A+ +R T GG +A A +L + +
Sbjct: 378 NYRKAKNSHPPGT---CPFYEELEALVRARTAIR---RTSGG-PGEAVALPRLGDSDTEM 430
Query: 166 NEESEG 171
+++ EG
Sbjct: 431 DDQDEG 436
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 48 WSVQETKEFLVIRAELDRSFMETKR----NKLLWEVISTRMREKGYNRSAEQCKCKWKNL 103
W +ETK FL I +E F E R N ++ I+ R+R G+ R+ EQC+ ++KNL
Sbjct: 479 WGFEETKVFLAILSE--SPFAEKLRTCHQNSQIYRAIAERLRALGFLRTLEQCRYRFKNL 536
Query: 104 VTRYKGCETTEPEAMRQQFPFYNELQAIFASRMQRMLWAETEGGSKKKAAAAVQLSSEEE 163
+ Y+ +++ P PFY E+ ++ R + ++ A G + Q S+E +
Sbjct: 537 LRSYRKAKSSCPPGT---CPFYEEMDSLM--RARTVIRAVEMVGEATGLPGSGQSSTEAD 591
Query: 164 D 164
D
Sbjct: 592 D 592
>sp|Q8IWY8|ZSC29_HUMAN Zinc finger and SCAN domain-containing protein 29 OS=Homo sapiens
GN=ZSCAN29 PE=1 SV=2
Length = 852
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 11/119 (9%)
Query: 48 WSVQETKEFLVIRAE--LDRSFMETKRNKLLWEVISTRMREKGYNRSAEQCKCKWKNLVT 105
W +ETK +L I +E + RN L+ ++ R+ E G+ R+ EQC+ K+K+L T
Sbjct: 411 WGYEETKTYLAILSETQFYEALRNCHRNSQLYGAVAERLWEYGFLRTPEQCRTKFKSLQT 470
Query: 106 RYKGCETTE-PEAMRQQFPFYNELQAIFASRMQRMLWAETEGGSKKKAAAAVQLSSEEE 163
Y+ + + PE PF+ E+ A+ + R+ A G ++ A+ VQ +SE E
Sbjct: 471 SYRKVKNGQAPETC----PFFEEMDALVSVRVA----APPNDGQEETASCPVQGTSEAE 521
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 48 WSVQETKEFLVI--RAELDRSFMETKRNKLLWEVISTRMREKGYNRSAEQCKCKWKNLVT 105
W +ET+ L I + E + RN ++ ++ R+RE G+ R+ EQC+ K+K L
Sbjct: 248 WGYEETRTLLAILSQTEFYEALRNCHRNSQVYGAVAERLREYGFLRTLEQCRTKFKGLQK 307
Query: 106 RYKGCETTEPEAMRQQFPFYNELQAIFASRM 136
Y+ ++ P + PF+ E++A+ ++++
Sbjct: 308 SYRKVKSGHPP---ETCPFFEEMEALMSAQV 335
>sp|Q39117|TGT2_ARATH Trihelix transcription factor GT-2 OS=Arabidopsis thaliana GN=GT-2
PE=2 SV=1
Length = 575
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 48 WSVQETKEFLVIRAELDRSFMETKRNKLLWEVISTRMREKGYNRSAEQCKCKWKNLVTRY 107
W E + + IR L+ ++ E LWE IS MR GYNRSA++CK KW+N+ +
Sbjct: 398 WPKTEVEALIRIRKNLEANYQENGTKGPLWEEISAGMRRLGYNRSAKRCKEKWENINKYF 457
Query: 108 KGC-ETTEPEAM-RQQFPFYNELQAIFASR 135
K E+ + + + P++++L+A++ R
Sbjct: 458 KKVKESNKKRPLDSKTCPYFHQLEALYNER 487
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 48 WSVQETKEFLVIRAELDRSFMETKRNKLLWEVISTRMREKGYNRSAEQCKCKWKNLV--- 104
W ET L IR+E+D++F ++ LWE IS +M E GY RS+++CK K++N+
Sbjct: 42 WPRPETLALLRIRSEMDKAFRDSTLKAPLWEEISRKMMELGYKRSSKKCKEKFENVYKYH 101
Query: 105 TRYKGCETTEPEAMRQQFPFYNELQAI 131
R K T + E + + F+ EL+A
Sbjct: 102 KRTKEGRTGKSEG--KTYRFFEELEAF 126
>sp|P17040|ZSC20_HUMAN Zinc finger and SCAN domain-containing protein 20 OS=Homo sapiens
GN=ZSCAN20 PE=2 SV=3
Length = 1043
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 14/128 (10%)
Query: 48 WSVQETKEFLVIRAELDRSFMETKR----NKLLWEVISTRMREKGYNRSAEQCKCKWKNL 103
W +ETK FL I +E F E R N+ ++ I+ ++R +G+ R+ EQC+ + KNL
Sbjct: 326 WGYEETKTFLAILSE--SPFSEKLRTCHQNRQVYRAIAEQLRARGFLRTLEQCRYRVKNL 383
Query: 104 VTRYKGCETTEPEAMRQQFPFYNELQAIFASRMQRMLWAETEGGSKKKAAAAVQLSSEEE 163
+ Y+ +++ P PFY EL+A+ +R T+G +A A +L +
Sbjct: 384 LRNYRKAKSSHPPGT---CPFYEELEALVRARTAIR---ATDG--PGEAVALPRLGYSDA 435
Query: 164 DFNEESEG 171
+ +E+ EG
Sbjct: 436 EMDEQEEG 443
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 48 WSVQETKEFLVIRAELDRSFMETKR----NKLLWEVISTRMREKGYNRSAEQCKCKWKNL 103
W +ETK FL I +E F E R N ++ I+ R+ G+ R+ EQC+ ++KNL
Sbjct: 486 WGYEETKAFLAILSE--SPFSEKLRTCHQNSQVYRAIAERLCALGFLRTLEQCRYRFKNL 543
Query: 104 VTRYKGCETTEPEAMRQQFPFYNELQAIFASR 135
+ Y+ +++ P PFY EL ++ +R
Sbjct: 544 LRSYRKAKSSHPPGT---CPFYEELDSLMRAR 572
>sp|Q9LZS0|PTL_ARATH Trihelix transcription factor PTL OS=Arabidopsis thaliana GN=PTL
PE=2 SV=1
Length = 591
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 48 WSVQETKEFLVIRAELDRSFMETKRNKLLWEVISTRMREK-GYNRSAEQCKCKWKNLVTR 106
W QET L IR+ LD F E + LW+ +S M E+ GY RS ++C+ K++NL
Sbjct: 120 WPRQETLTLLEIRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKY 179
Query: 107 YKGCETTEPEAMRQQ---FPFYNELQAIFA 133
Y+ +T E +A RQ + F+ +L+A++
Sbjct: 180 YR--KTKEGKAGRQDGKHYRFFRQLEALYG 207
>sp|Q9C882|GTL1_ARATH Trihelix transcription factor GTL1 OS=Arabidopsis thaliana GN=GTL1
PE=1 SV=2
Length = 587
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 48 WSVQETKEFLVIRAELDRSFMETKRNKLLWEVISTRMREKGYNRSAEQCKCKWKNLVTRY 107
W E + +R+ ++ + + LLWE IST M+ GYNR+A++CK KW+N+ Y
Sbjct: 436 WPKAEILALINLRSGMEPRYQDNVPKGLLWEEISTSMKRMGYNRNAKRCKEKWENINKYY 495
Query: 108 KGCETTE---PEAMRQQFPFYNELQAIFASRM 136
K + + P+ + P+++ L ++ +++
Sbjct: 496 KKVKESNKKRPQDAK-TCPYFHRLDLLYRNKV 526
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 48 WSVQETKEFLVIRAELDRSFMETKRNKLLWEVISTRMREKGYNRSAEQCKCKWKNLVTRY 107
W +ET L IR+++D +F + LWE +S ++ E GY RS+++CK K++N+ Y
Sbjct: 63 WPREETLALLRIRSDMDSTFRDATLKAPLWEHVSRKLLELGYKRSSKKCKEKFENVQKYY 122
Query: 108 KGCETTEPEAMR---QQFPFYNELQAI 131
K T E R + + F+++L+A+
Sbjct: 123 K--RTKETRGGRHDGKAYKFFSQLEAL 147
>sp|Q8H181|GTL2_ARATH Trihelix transcription factor GTL2 OS=Arabidopsis thaliana
GN=At5g28300 PE=2 SV=1
Length = 619
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 40 DTSDRFPQWSVQETKEFLVIRAEL----------DRSFMETKRNKLLWEVISTRMREKGY 89
D SD +W E + IR + + S + + LWE IS +M E GY
Sbjct: 452 DKSDLGKRWPKDEVLALINIRRSISNMNDDDHKDENSLSTSSKAVPLWERISKKMLEIGY 511
Query: 90 NRSAEQCKCKWKNLVTRY---KGCETTEPEAMRQQFPFYNELQAIFA 133
RSA++CK KW+N+ + K P R P++++L A+++
Sbjct: 512 KRSAKRCKEKWENINKYFRKTKDVNKKRPLDSR-TCPYFHQLTALYS 557
>sp|Q63HK3|ZKSC2_HUMAN Zinc finger protein with KRAB and SCAN domains 2 OS=Homo sapiens
GN=ZKSCAN2 PE=1 SV=2
Length = 967
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 48 WSVQETKEFLVIRAE--LDRSFMETKRNKLLWEVISTRMREKGYNRSAEQCKCKWKNLVT 105
W +ETK FL I E + R L+ ++ ++RE G+ R+ EQC+ K+K+L
Sbjct: 500 WGYEETKTFLDILRETRFYEALQACHRKSKLYGAVAEQLRECGFLRTPEQCRTKFKSLQK 559
Query: 106 RYKGCETTEPEAMRQQFPFYNELQAIFASR 135
Y+ + + + FY E+ A+ SR
Sbjct: 560 SYRKVKNGH---VLESCAFYKEMDALINSR 586
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 48 WSVQETKEFLVIRAELDRSFMET----KRNKLLWEVISTRMREKGYNRSAEQCKCKWKNL 103
WS +ETK FL I E F ET RN ++ ++ +RE G+ R+ EQC+ K+K+L
Sbjct: 343 WSYEETKTFLAILKE--SRFYETLQACPRNSQVYGAVAEWLRECGFLRTPEQCRTKFKSL 400
Query: 104 VTRYK 108
Y+
Sbjct: 401 QKSYR 405
>sp|Q9NX65|ZN434_HUMAN Zinc finger protein 434 OS=Homo sapiens GN=ZNF434 PE=2 SV=2
Length = 485
Score = 38.1 bits (87), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 89/211 (42%), Gaps = 34/211 (16%)
Query: 48 WSVQETKEFLVI--RAELDRSFMETKRNKLLWEVISTRMREKGYNRSAEQCKCKWKNLVT 105
W +ETK L I ++ ++N ++ ++ + E+G+ R+ EQC+ K+K+L
Sbjct: 44 WGYEETKTLLAILSSSQFYGKLQTCQQNSQIYRAMAEGLWEQGFLRTPEQCRTKFKSLQL 103
Query: 106 RYKGCETTEPEAMRQQFP----FYNELQAIFASRMQRMLWAETEGGSKKKAAAAVQLSSE 161
Y+ + R + P FY E+ A+ S W A+A ++S+
Sbjct: 104 SYR-------KVRRGRVPEPCIFYEEMNALSGS------W-----------ASAPPMASD 139
Query: 162 EEDFNEESEGEKGNVMRKKKKSKSSTGGAGASGSGSASSSHNFKEILEEFMKQQMQMEMQ 221
E S+ E G + + + G + G+ +F+ +E K + +
Sbjct: 140 AVPGQEGSDIEAGELNHQNGEPTEVEDG---TVDGADRDEKDFRNPGQEVRKLDLPVLFP 196
Query: 222 WREAFEARENERRIKEMEWRQTMEALENERI 252
R FE + NE + + ++W + E N+ +
Sbjct: 197 NRLGFEFK-NEIKKENLKWDDSEEVEINKAL 226
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.125 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,960,734
Number of Sequences: 539616
Number of extensions: 4037165
Number of successful extensions: 79805
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 905
Number of HSP's that attempted gapping in prelim test: 49235
Number of HSP's gapped (non-prelim): 20482
length of query: 292
length of database: 191,569,459
effective HSP length: 116
effective length of query: 176
effective length of database: 128,974,003
effective search space: 22699424528
effective search space used: 22699424528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)