Query 022744
Match_columns 292
No_of_seqs 183 out of 1440
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 10:25:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022744.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022744hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 4.3E-51 1.5E-55 386.9 22.5 275 1-291 1-284 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 4.7E-42 1.6E-46 328.1 22.0 277 12-291 7-306 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 4.7E-39 1.6E-43 307.2 24.6 265 10-291 3-279 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 2.7E-39 9.2E-44 307.1 21.6 266 11-291 5-282 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 8.7E-39 3E-43 304.1 24.1 263 12-291 8-287 (463)
6 2iya_A OLEI, oleandomycin glyc 99.9 2.7E-23 9.3E-28 194.3 17.7 249 5-291 4-266 (424)
7 1iir_A Glycosyltransferase GTF 99.8 1.7E-20 5.8E-25 175.1 8.1 125 14-148 1-129 (415)
8 4amg_A Snogd; transferase, pol 99.8 1.2E-18 4.2E-23 160.8 15.8 126 12-146 21-159 (400)
9 1rrv_A Glycosyltransferase GTF 99.7 1.3E-18 4.4E-23 162.3 8.1 124 14-147 1-129 (416)
10 2iyf_A OLED, oleandomycin glyc 99.7 7.2E-17 2.4E-21 150.7 16.6 126 13-147 7-136 (430)
11 3ia7_A CALG4; glycosysltransfe 99.6 2.2E-14 7.4E-19 132.0 18.6 126 13-146 4-134 (402)
12 3rsc_A CALG2; TDP, enediyne, s 99.6 5.2E-14 1.8E-18 130.5 16.9 126 13-146 20-150 (415)
13 2p6p_A Glycosyl transferase; X 99.6 8.4E-14 2.9E-18 127.9 17.6 123 14-144 1-136 (384)
14 2yjn_A ERYCIII, glycosyltransf 99.5 2.8E-13 9.7E-18 127.0 17.3 126 13-146 20-175 (441)
15 3oti_A CALG3; calicheamicin, T 99.1 2.3E-10 7.8E-15 105.5 12.1 121 13-145 20-160 (398)
16 3h4t_A Glycosyltransferase GTF 99.1 8.4E-11 2.9E-15 109.1 6.4 121 14-147 1-127 (404)
17 4fzr_A SSFS6; structural genom 99.0 4.9E-10 1.7E-14 103.2 9.4 127 12-146 14-154 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.0 1.4E-09 4.6E-14 99.8 9.7 126 13-146 1-145 (391)
19 3otg_A CALG1; calicheamicin, T 98.9 6.3E-09 2.2E-13 95.8 9.8 124 12-146 19-161 (412)
20 3s2u_A UDP-N-acetylglucosamine 98.3 2.7E-06 9.2E-11 77.7 11.4 116 13-143 2-122 (365)
21 1f0k_A MURG, UDP-N-acetylgluco 97.4 0.0011 3.8E-08 59.2 11.1 114 13-144 6-127 (364)
22 3fro_A GLGA glycogen synthase; 95.9 0.13 4.3E-06 46.5 13.3 130 12-144 1-153 (439)
23 3c48_A Predicted glycosyltrans 94.9 0.059 2E-06 49.1 7.6 124 11-145 18-154 (438)
24 2jjm_A Glycosyl transferase, g 90.6 2.7 9.2E-05 37.3 11.8 112 13-144 15-133 (394)
25 3okp_A GDP-mannose-dependent a 90.2 0.6 2E-05 41.3 7.0 110 12-145 3-118 (394)
26 3s28_A Sucrose synthase 1; gly 84.7 1.8 6.2E-05 43.4 7.2 135 3-143 267-437 (816)
27 2iuy_A Avigt4, glycosyltransfe 84.7 1 3.6E-05 39.2 5.0 39 13-51 3-57 (342)
28 2x6q_A Trehalose-synthase TRET 84.2 1.4 5E-05 39.4 5.9 44 8-51 35-80 (416)
29 2r60_A Glycosyl transferase, g 83.1 1.1 3.6E-05 41.6 4.5 122 13-145 7-152 (499)
30 2x0d_A WSAF; GT4 family, trans 82.3 1.1 3.8E-05 40.9 4.3 41 11-51 44-89 (413)
31 2iw1_A Lipopolysaccharide core 80.4 1.6 5.4E-05 38.3 4.5 51 15-73 2-55 (374)
32 2wqk_A 5'-nucleotidase SURE; S 79.8 9.5 0.00033 32.4 9.0 99 30-145 17-128 (251)
33 2gek_A Phosphatidylinositol ma 78.1 2.5 8.7E-05 37.4 5.1 42 11-52 18-63 (406)
34 1v4v_A UDP-N-acetylglucosamine 77.7 7.6 0.00026 34.0 8.2 36 14-50 6-42 (376)
35 3vue_A GBSS-I, granule-bound s 76.8 2.8 9.7E-05 39.7 5.3 39 12-50 8-52 (536)
36 3hbm_A UDP-sugar hydrolase; PS 73.5 7.1 0.00024 33.7 6.6 86 22-144 13-101 (282)
37 1psw_A ADP-heptose LPS heptosy 73.2 33 0.0011 29.6 11.0 102 14-141 1-106 (348)
38 1rzu_A Glycogen synthase 1; gl 72.6 3.5 0.00012 37.7 4.7 38 14-51 1-44 (485)
39 2qzs_A Glycogen synthase; glyc 71.2 4.1 0.00014 37.3 4.8 38 14-51 1-44 (485)
40 2yxb_A Coenzyme B12-dependent 71.1 4.4 0.00015 31.9 4.3 39 12-50 17-55 (161)
41 1ccw_A Protein (glutamate muta 67.5 9.5 0.00033 28.9 5.4 39 12-50 2-40 (137)
42 1id1_A Putative potassium chan 64.3 7 0.00024 29.8 4.1 34 12-50 2-35 (153)
43 1kjn_A MTH0777; hypotethical p 58.7 7.7 0.00026 30.2 3.3 49 9-57 4-52 (157)
44 3dzc_A UDP-N-acetylglucosamine 58.2 19 0.00064 32.3 6.4 43 8-51 20-63 (396)
45 3bfv_A CAPA1, CAPB2, membrane 57.8 75 0.0026 26.7 10.0 41 12-52 80-122 (271)
46 2i2x_B MTAC, methyltransferase 57.7 17 0.00057 30.8 5.7 40 11-50 121-160 (258)
47 3qjg_A Epidermin biosynthesis 57.4 21 0.00073 28.4 5.9 41 13-54 5-45 (175)
48 3zqu_A Probable aromatic acid 57.3 16 0.00054 30.1 5.2 41 13-54 4-44 (209)
49 1y80_A Predicted cobalamin bin 57.3 16 0.00054 29.7 5.3 40 12-51 87-126 (210)
50 3cio_A ETK, tyrosine-protein k 56.8 81 0.0028 26.9 10.1 40 13-52 103-144 (299)
51 2hy7_A Glucuronosyltransferase 52.9 11 0.00038 33.9 4.0 36 13-50 14-52 (406)
52 1mvl_A PPC decarboxylase athal 52.5 27 0.00091 28.7 5.9 43 12-56 18-60 (209)
53 1g5t_A COB(I)alamin adenosyltr 51.2 95 0.0033 25.0 9.9 98 12-125 27-130 (196)
54 3lqk_A Dipicolinate synthase s 50.4 22 0.00075 29.0 5.0 41 12-53 6-47 (201)
55 3zzm_A Bifunctional purine bio 49.8 50 0.0017 30.9 7.8 98 13-125 9-112 (523)
56 2lpm_A Two-component response 49.8 17 0.00057 27.0 3.9 39 102-142 42-85 (123)
57 2vqe_B 30S ribosomal protein S 48.3 1.1E+02 0.0036 26.0 9.1 31 116-146 159-191 (256)
58 2r8r_A Sensor protein; KDPD, P 48.3 27 0.00092 29.1 5.3 41 11-51 4-44 (228)
59 3ezx_A MMCP 1, monomethylamine 48.3 26 0.00089 28.7 5.2 40 11-50 90-129 (215)
60 3ot5_A UDP-N-acetylglucosamine 46.6 40 0.0014 30.2 6.7 114 12-143 26-145 (403)
61 4ehi_A Bifunctional purine bio 45.9 18 0.0006 34.0 4.1 52 16-78 26-79 (534)
62 1sbz_A Probable aromatic acid 45.2 28 0.00095 28.3 4.8 39 15-54 2-41 (197)
63 3to5_A CHEY homolog; alpha(5)b 45.2 26 0.0009 26.3 4.4 32 115-146 57-97 (134)
64 3h4t_A Glycosyltransferase GTF 45.0 7.5 0.00026 34.9 1.5 23 267-291 210-232 (404)
65 1lss_A TRK system potassium up 45.0 29 0.00098 25.2 4.7 33 13-50 4-36 (140)
66 3tov_A Glycosyl transferase fa 44.5 24 0.00081 31.1 4.7 105 12-141 7-115 (349)
67 1g63_A Epidermin modifying enz 44.0 34 0.0012 27.3 5.1 41 14-55 3-43 (181)
68 3lyu_A Putative hydrogenase; t 42.6 23 0.00079 26.8 3.8 36 14-52 19-54 (142)
69 3gl9_A Response regulator; bet 40.5 54 0.0019 23.0 5.5 42 103-146 36-86 (122)
70 3mcu_A Dipicolinate synthase, 40.0 35 0.0012 27.9 4.7 40 13-53 5-45 (207)
71 1tvm_A PTS system, galactitol- 38.7 43 0.0015 24.3 4.6 44 2-48 13-57 (113)
72 1qzu_A Hypothetical protein MD 38.4 46 0.0016 27.1 5.2 44 12-56 18-62 (206)
73 4hwg_A UDP-N-acetylglucosamine 38.0 46 0.0016 29.7 5.6 109 18-144 13-125 (385)
74 1p3y_1 MRSD protein; flavoprot 37.4 35 0.0012 27.6 4.2 41 13-54 8-48 (194)
75 3kkj_A Amine oxidase, flavin-c 37.2 18 0.00063 28.7 2.6 18 31-48 15-32 (336)
76 3mc3_A DSRE/DSRF-like family p 36.7 55 0.0019 24.4 5.1 31 23-53 28-58 (134)
77 3p9x_A Phosphoribosylglycinami 35.8 50 0.0017 27.1 5.0 46 100-145 14-61 (211)
78 2ejb_A Probable aromatic acid 35.4 60 0.002 26.0 5.3 42 14-56 2-43 (189)
79 3beo_A UDP-N-acetylglucosamine 35.2 34 0.0012 29.5 4.2 38 13-51 8-47 (375)
80 4b4o_A Epimerase family protei 34.1 25 0.00084 29.7 3.0 27 22-50 7-33 (298)
81 2gt1_A Lipopolysaccharide hept 34.0 46 0.0016 28.4 4.8 44 14-57 1-46 (326)
82 4ds3_A Phosphoribosylglycinami 33.8 73 0.0025 26.0 5.7 45 100-144 19-65 (209)
83 3ruf_A WBGU; rossmann fold, UD 32.4 32 0.0011 29.7 3.5 43 2-49 15-57 (351)
84 2gk4_A Conserved hypothetical 32.0 33 0.0011 28.6 3.3 26 24-51 28-53 (232)
85 1g8m_A Aicar transformylase-IM 31.7 39 0.0013 32.1 4.1 86 28-125 16-106 (593)
86 3lrx_A Putative hydrogenase; a 31.0 36 0.0012 26.1 3.2 37 14-53 24-60 (158)
87 3eag_A UDP-N-acetylmuramate:L- 30.7 52 0.0018 28.5 4.6 33 13-49 4-36 (326)
88 3vot_A L-amino acid ligase, BL 30.6 2.8E+02 0.0097 24.5 9.9 35 12-51 4-38 (425)
89 2yvu_A Probable adenylyl-sulfa 30.5 72 0.0025 24.6 5.1 51 1-51 1-51 (186)
90 3t6k_A Response regulator rece 29.3 87 0.003 22.4 5.1 32 115-146 48-88 (136)
91 3oy2_A Glycosyltransferase B73 28.9 53 0.0018 28.8 4.4 36 15-51 2-40 (413)
92 4g6h_A Rotenone-insensitive NA 28.3 35 0.0012 31.7 3.2 35 11-50 40-74 (502)
93 2q5c_A NTRC family transcripti 27.9 54 0.0018 26.3 3.9 42 100-146 129-170 (196)
94 1vgv_A UDP-N-acetylglucosamine 27.5 62 0.0021 27.9 4.5 34 15-49 2-36 (384)
95 3bul_A Methionine synthase; tr 27.3 74 0.0025 30.3 5.2 40 12-51 97-136 (579)
96 3tqr_A Phosphoribosylglycinami 27.2 69 0.0024 26.3 4.4 44 101-144 18-62 (215)
97 1meo_A Phosophoribosylglycinam 27.2 73 0.0025 25.9 4.6 44 101-144 13-58 (209)
98 2g1u_A Hypothetical protein TM 26.4 79 0.0027 23.7 4.5 36 11-51 17-52 (155)
99 3kcq_A Phosphoribosylglycinami 26.2 1E+02 0.0034 25.2 5.3 45 100-144 20-66 (215)
100 1p9o_A Phosphopantothenoylcyst 26.1 39 0.0013 29.5 2.9 23 30-52 68-90 (313)
101 3av3_A Phosphoribosylglycinami 26.0 75 0.0025 25.9 4.4 45 101-145 16-62 (212)
102 3p0j_A Tyrosyl-tRNA synthetase 25.7 59 0.002 31.7 4.3 46 7-52 376-426 (690)
103 3m6m_D Sensory/regulatory prot 25.6 84 0.0029 22.8 4.4 32 115-146 58-100 (143)
104 3sty_A Methylketone synthase 1 24.5 94 0.0032 24.5 4.9 46 4-50 3-48 (267)
105 3slg_A PBGP3 protein; structur 24.4 68 0.0023 27.8 4.2 45 2-50 13-58 (372)
106 2ywr_A Phosphoribosylglycinami 24.2 98 0.0033 25.2 4.9 45 101-145 14-60 (216)
107 3f6p_A Transcriptional regulat 23.8 1.3E+02 0.0043 20.8 5.0 42 103-146 36-83 (120)
108 1pq4_A Periplasmic binding pro 23.6 1.5E+02 0.0052 25.2 6.2 53 100-154 224-278 (291)
109 3ty2_A 5'-nucleotidase SURE; s 23.5 1.1E+02 0.0037 26.0 5.0 48 8-57 6-53 (261)
110 3ug7_A Arsenical pump-driving 23.4 1.1E+02 0.0037 26.7 5.4 49 4-52 16-65 (349)
111 2pju_A Propionate catabolism o 22.9 71 0.0024 26.4 3.8 41 99-144 140-180 (225)
112 3h1g_A Chemotaxis protein CHEY 22.8 1.6E+02 0.0056 20.4 5.5 32 115-146 51-91 (129)
113 1jkx_A GART;, phosphoribosylgl 22.7 1E+02 0.0034 25.1 4.6 44 101-144 13-58 (212)
114 1u7z_A Coenzyme A biosynthesis 22.6 62 0.0021 26.8 3.3 22 30-51 37-58 (226)
115 3auf_A Glycinamide ribonucleot 22.5 83 0.0028 26.0 4.1 31 115-145 51-81 (229)
116 3oti_A CALG3; calicheamicin, T 22.1 30 0.001 30.5 1.4 22 269-290 221-242 (398)
117 1pno_A NAD(P) transhydrogenase 21.6 91 0.0031 24.7 3.8 38 14-51 24-64 (180)
118 3noh_A Putative peptide bindin 21.3 61 0.0021 24.1 2.6 17 31-47 78-94 (139)
119 1dhr_A Dihydropteridine reduct 21.1 1.2E+02 0.0042 24.4 5.0 34 13-49 6-39 (241)
120 1d4o_A NADP(H) transhydrogenas 20.9 95 0.0033 24.6 3.8 38 14-51 23-63 (184)
121 3gt7_A Sensor protein; structu 20.4 1.8E+02 0.0061 21.1 5.5 42 103-146 41-91 (154)
122 1dbw_A Transcriptional regulat 20.4 2E+02 0.007 19.7 5.6 42 103-146 37-85 (126)
123 3jte_A Response regulator rece 20.1 1.7E+02 0.006 20.6 5.2 33 114-146 48-87 (143)
124 3oz2_A Digeranylgeranylglycero 20.1 54 0.0018 28.3 2.6 18 31-48 17-34 (397)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=4.3e-51 Score=386.86 Aligned_cols=275 Identities=18% Similarity=0.266 Sum_probs=205.0
Q ss_pred CchhhhhcccCCCceEEEEeCCCccChHHHHHHHHHHhhCC--CEEEEEeCcccccccccCCCCCCCCeeEEEccCCCCC
Q 022744 1 MENIEKKAASCKRVHCLVLSYPAQGHINPLLQFAKRLEHKG--LKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDE 78 (292)
Q Consensus 1 ~~~~~~~~~~~~~~hvv~~p~p~~GH~~P~l~La~~La~rG--~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~~~~ 78 (292)
|.++-.+|.+.+++|||++|+|++||++||++|||+|++|| ++|||++|+.+..++.+......++|+|+.+|+|+|+
T Consensus 1 ~~~~~~~M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~ 80 (454)
T 3hbf_A 1 MSTFKNEMNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPK 80 (454)
T ss_dssp -----------CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCT
T ss_pred CccccccccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCC
Confidence 34555567778899999999999999999999999999999 9999999987776654331112358999999999987
Q ss_pred CCCCCccCHHHHHHHHHHhCcHHHHHHHHHhhcC-CCCccEEEeCCCCccHHHHHHHhCCCcEEEeccchHHHHHHHHHh
Q 022744 79 GGSAQTEGVEAYLERFWQIGPRSLCELVENMNGS-GVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCVVDCIYYHVN 157 (292)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~ 157 (292)
+.+...+....+..+.+.+...+++.++++.++ .++++|||+|.|++|+.++|+++|||++.|||++++.+++++|++
T Consensus 81 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~ 159 (454)
T 3hbf_A 81 -GYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTD 159 (454)
T ss_dssp -TCCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHH
T ss_pred -CccccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhH
Confidence 544433433334444444445667766664322 357899999999999999999999999999999999999998864
Q ss_pred c--CCCC--CCCCCcccc-cCCCCCCCCCCCCCcccCCCCchhHHHHHHHHHhhccCCCCEEEEcchHHhhHhHHHHhcc
Q 022744 158 K--GLLK--LPLLDSQLL-LPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEKEVAQWLGK 232 (292)
Q Consensus 158 ~--~~~~--~~~~~~~~~-iPg~p~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNtf~eLE~~~~~~l~~ 232 (292)
. .... ...+++.+. +||+|+++.+|||.++.. +....+.+++.+ +.+...+++++++|||+|||++++++++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~~-~~~~~~~~~~vl~ns~~eLE~~~~~~~~~ 237 (454)
T 3hbf_A 160 LIREKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLHK-MGLELPRANAVAINSFATIHPLIENELNS 237 (454)
T ss_dssp HHHHTCCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHHH-HHHHGGGSSCEEESSCGGGCHHHHHHHHT
T ss_pred HHHhhcCCCccccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHHH-HHHhhccCCEEEECChhHhCHHHHHHHHh
Confidence 2 1111 011234565 899999999999988764 334456777777 88899999999999999999999999987
Q ss_pred cC-CeeeeccCCCCccccccccccccCCcCCCCCCchhhhhhhccCCCCcEEEEEeCccc
Q 022744 233 HW-SLKTIGPTIPSMYLDKQIEEDKDYGFSIFKPNNESCIKWLNDRANGLLFIYHLGVWQ 291 (292)
Q Consensus 233 ~~-~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~WLD~q~~~SVvYVsFGS~~ 291 (292)
.. ++++|||+++... . . .+ .++++|++|||+|+++|||||||||.+
T Consensus 238 ~~~~v~~vGPl~~~~~-------~-~----~~-~~~~~~~~wLd~~~~~~vVyvsfGS~~ 284 (454)
T 3hbf_A 238 KFKLLLNVGPFNLTTP-------Q-R----KV-SDEHGCLEWLDQHENSSVVYISFGSVV 284 (454)
T ss_dssp TSSCEEECCCHHHHSC-------C-S----CC-CCTTCHHHHHHTSCTTCEEEEECCSSC
T ss_pred cCCCEEEECCcccccc-------c-c----cc-cchHHHHHHHhcCCCCceEEEecCCCC
Confidence 65 6999999965310 0 0 01 124689999999999999999999986
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=4.7e-42 Score=328.13 Aligned_cols=277 Identities=25% Similarity=0.461 Sum_probs=195.5
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCC---C-CCCeeEEEccCCCCCCC--CCCcc
Q 022744 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSS---P-STSISLEAISDGYDEGG--SAQTE 85 (292)
Q Consensus 12 ~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~---~-~~~i~~~~l~~~~~~~~--~~~~~ 85 (292)
+++||+++|+|++||++||++||++|++|||+|||++|+.+..++.+.... . .++++|+.+|+++|+.+ .....
T Consensus 7 ~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~~ 86 (482)
T 2pq6_A 7 RKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQ 86 (482)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------C
T ss_pred CCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcch
Confidence 357999999999999999999999999999999999999876655432100 0 14899999998877511 11123
Q ss_pred CHHHHHHHHHHhCcHHHHHHHHHhhcC--CCCccEEEeCCCCccHHHHHHHhCCCcEEEeccchHHHHHHHHHh----cC
Q 022744 86 GVEAYLERFWQIGPRSLCELVENMNGS--GVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCVVDCIYYHVN----KG 159 (292)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~~l~~l~~~--~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~----~~ 159 (292)
++..++..+.+.+...++++++++..+ ..++||||+|.++.|+..+|+++|||++.|++++++.++.++++. .+
T Consensus 87 ~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 166 (482)
T 2pq6_A 87 DVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERG 166 (482)
T ss_dssp CHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTT
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcC
Confidence 444455555466778888888887532 246899999999999999999999999999999998887765542 35
Q ss_pred CCCCCCC--------Cccc-ccCCCCCCCCCCCCCcccCCCCchhHHHHHHHHHhhccCCCCEEEEcchHHhhHhHHHHh
Q 022744 160 LLKLPLL--------DSQL-LLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEKEVAQWL 230 (292)
Q Consensus 160 ~~~~~~~--------~~~~-~iPg~p~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNtf~eLE~~~~~~l 230 (292)
+.|.... +..+ .+||+++++..++|.++...+....+.+.+.+ ..+..++++++++|||++||+++++++
T Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vl~nt~~~le~~~~~~~ 245 (482)
T 2pq6_A 167 IIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIE-VADRVNKDTTILLNTFNELESDVINAL 245 (482)
T ss_dssp CSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHH-HHHTCCTTCCEEESSCGGGGHHHHHHH
T ss_pred CCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHH-HHHhhccCCEEEEcChHHHhHHHHHHH
Confidence 5553211 1223 37999989889999776543333334555555 666788899999999999999999999
Q ss_pred cccC-CeeeeccCCCC-ccccccccccccCCcCCCCCCchhhhhhhccCCCCcEEEEEeCccc
Q 022744 231 GKHW-SLKTIGPTIPS-MYLDKQIEEDKDYGFSIFKPNNESCIKWLNDRANGLLFIYHLGVWQ 291 (292)
Q Consensus 231 ~~~~-~v~~VGPl~~~-~~~~~~~~~~~~~~~~~~~~~~~~cl~WLD~q~~~SVvYVsFGS~~ 291 (292)
+... ++++|||+++. .. ......+...+.++|.+ +.+|++|||+|+++|||||||||.+
T Consensus 246 ~~~~~~v~~VGPl~~~~~~-~~~~~~~~~~~~~l~~~-~~~~~~wld~~~~~~vv~vs~GS~~ 306 (482)
T 2pq6_A 246 SSTIPSIYPIGPLPSLLKQ-TPQIHQLDSLDSNLWKE-DTECLDWLESKEPGSVVYVNFGSTT 306 (482)
T ss_dssp HTTCTTEEECCCHHHHHHT-STTGGGGCC----------CHHHHHHTTSCTTCEEEEECCSSS
T ss_pred HHhCCcEEEEcCCcccccc-ccccccccccccccccc-chHHHHHHhcCCCCceEEEecCCcc
Confidence 8764 69999999642 10 00000000101234433 4679999999999999999999976
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=4.7e-39 Score=307.24 Aligned_cols=265 Identities=24% Similarity=0.319 Sum_probs=187.2
Q ss_pred cCCCceEEEEeCCCccChHHHHHHHHHHhhC-CCEEEEEeCccc--ccccccCCCCCCCCeeEEEccCCCCCCCCCCccC
Q 022744 10 SCKRVHCLVLSYPAQGHINPLLQFAKRLEHK-GLKVTLVTTYFI--SKSLHRDSSSPSTSISLEAISDGYDEGGSAQTEG 86 (292)
Q Consensus 10 ~~~~~hvv~~p~p~~GH~~P~l~La~~La~r-G~~VT~itt~~~--~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 86 (292)
..+++||+++|+|++||++||++||++|++| ||+|||++++.+ .+.+.+.......+++|+.+|++..+ +.....+
T Consensus 3 ~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-~~~~~~~ 81 (480)
T 2vch_A 3 ESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLT-DLSSSTR 81 (480)
T ss_dssp ---CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCT-TSCTTCC
T ss_pred CCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCC-CCCCchh
Confidence 4556899999999999999999999999998 999999999874 23222100001358999999864221 1111123
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHhhcCCCCc-cEEEeCCCCccHHHHHHHhCCCcEEEeccchHHHHHHHHHhc----CCC
Q 022744 87 VEAYLERFWQIGPRSLCELVENMNGSGVPV-DCIVYDSFLPWALDVAKKFGLVGAAFLTQSCVVDCIYYHVNK----GLL 161 (292)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~-d~iI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~~----~~~ 161 (292)
....+......+.+.++++++++.+ ..++ ||||+|.++.|+.++|+++|||++.|++++++.+++++|++. +..
T Consensus 82 ~~~~~~~~~~~~~~~l~~ll~~~~~-~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (480)
T 2vch_A 82 IESRISLTVTRSNPELRKVFDSFVE-GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC 160 (480)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHH-TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhcc-CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCC
Confidence 3222222334456678888877632 2467 999999999999999999999999999999998888877642 222
Q ss_pred CCCCCCcccccCCCCCCCCCCCCCcccCCCCchhHHHHHHHHHhhccCCCCEEEEcchHHhhHhHHHHhccc----CCee
Q 022744 162 KLPLLDSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEKEVAQWLGKH----WSLK 237 (292)
Q Consensus 162 ~~~~~~~~~~iPg~p~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNtf~eLE~~~~~~l~~~----~~v~ 237 (292)
++.+.+..+.+||+|+++..++|..+.+.. ...++.+.+ ..+..++++|+++|||+|||+.++.++.+. .+++
T Consensus 161 ~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~--~~~~~~~~~-~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~ 237 (480)
T 2vch_A 161 EFRELTEPLMLPGCVPVAGKDFLDPAQDRK--DDAYKWLLH-NTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVY 237 (480)
T ss_dssp CGGGCSSCBCCTTCCCBCGGGSCGGGSCTT--SHHHHHHHH-HHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEE
T ss_pred cccccCCcccCCCCCCCChHHCchhhhcCC--chHHHHHHH-HHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEE
Confidence 211112345689999999899997664322 124455556 667788899999999999999999988752 3699
Q ss_pred eeccCCCCccccccccccccCCcCCCCCCchhhhhhhccCCCCcEEEEEeCccc
Q 022744 238 TIGPTIPSMYLDKQIEEDKDYGFSIFKPNNESCIKWLNDRANGLLFIYHLGVWQ 291 (292)
Q Consensus 238 ~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~WLD~q~~~SVvYVsFGS~~ 291 (292)
+|||++.... .. . .+. .+.+|.+|||+|+++|||||||||.+
T Consensus 238 ~vGpl~~~~~------~~-~----~~~-~~~~~~~wLd~~~~~~vvyvs~GS~~ 279 (480)
T 2vch_A 238 PVGPLVNIGK------QE-A----KQT-EESECLKWLDNQPLGSVLYVSFGSGG 279 (480)
T ss_dssp ECCCCCCCSC------SC-C----------CHHHHHHHTSCTTCEEEEECTTTC
T ss_pred EEeccccccc------cc-c----Ccc-chhHHHHHhcCCCCCceEEEeccccc
Confidence 9999975310 00 0 011 24689999999999999999999985
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.7e-39 Score=307.09 Aligned_cols=266 Identities=24% Similarity=0.323 Sum_probs=184.1
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHhhCC--CEEEEEeCcccccccccCCCC-CCCCeeEEEccCCCCCCCCCCccCH
Q 022744 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKG--LKVTLVTTYFISKSLHRDSSS-PSTSISLEAISDGYDEGGSAQTEGV 87 (292)
Q Consensus 11 ~~~~hvv~~p~p~~GH~~P~l~La~~La~rG--~~VT~itt~~~~~~~~~~~~~-~~~~i~~~~l~~~~~~~~~~~~~~~ 87 (292)
.+++||+++|+|++||++||++||++|++|| +.|||++|+.+..++.+...+ ...+|+|+.+++++|+ +.+...+.
T Consensus 5 ~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~-~~~~~~~~ 83 (456)
T 2c1x_A 5 TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPE-GYVFAGRP 83 (456)
T ss_dssp --CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCT-TCCCCCCT
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCC-cccccCCh
Confidence 3468999999999999999999999999985 667889998655443321001 1258999999988876 33211122
Q ss_pred HHHHHHHHHhCcHHHHHHHHHhhcC-CCCccEEEeCCCCccHHHHHHHhCCCcEEEeccchHHHHHHHHHh----c-CCC
Q 022744 88 EAYLERFWQIGPRSLCELVENMNGS-GVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCVVDCIYYHVN----K-GLL 161 (292)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~l~~l~~~-~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~----~-~~~ 161 (292)
...+..+.+.+...++++++++.++ ..++||||+|.++.|+.++|+++|||++.||+++++.++.+++.. . +..
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (456)
T 2c1x_A 84 QEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVS 163 (456)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSS
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCc
Confidence 2223333333344566666554321 247899999999999999999999999999999998887765542 1 321
Q ss_pred CC-CCCCccc-ccCCCCCCCCCCCCCcccCCCCchhHHHHHHHHHhhccCCCCEEEEcchHHhhHhHHHHhcccC-Ceee
Q 022744 162 KL-PLLDSQL-LLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEKEVAQWLGKHW-SLKT 238 (292)
Q Consensus 162 ~~-~~~~~~~-~iPg~p~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNtf~eLE~~~~~~l~~~~-~v~~ 238 (292)
+. ...+..+ .+||+++++.+++|..+........+.+.+.+ ..+..++++++++|||+|||.+++++++... ++++
T Consensus 164 ~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~ 242 (456)
T 2c1x_A 164 GIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHR-MGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLN 242 (456)
T ss_dssp CCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHH-HHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCEEE
T ss_pred ccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHH-HHHhhhhCCEEEECChHHHhHHHHHHHHhcCCCEEE
Confidence 11 1112334 48999999999999755432222234455555 5566788999999999999999999988765 6999
Q ss_pred eccCCCCccccccccccccCCcCCCCCCchhhhhhhccCCCCcEEEEEeCccc
Q 022744 239 IGPTIPSMYLDKQIEEDKDYGFSIFKPNNESCIKWLNDRANGLLFIYHLGVWQ 291 (292)
Q Consensus 239 VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~WLD~q~~~SVvYVsFGS~~ 291 (292)
|||++.... .. + +. ++.+|++|||+|+++|||||||||.+
T Consensus 243 vGpl~~~~~-------~~----~-~~-~~~~~~~wl~~~~~~~vv~vs~GS~~ 282 (456)
T 2c1x_A 243 IGPFNLITP-------PP----V-VP-NTTGCLQWLKERKPTSVVYISFGTVT 282 (456)
T ss_dssp CCCHHHHC----------------------CHHHHHHTSCTTCEEEEECCSSC
T ss_pred ecCcccCcc-------cc----c-cc-chhhHHHHHhcCCCcceEEEecCccc
Confidence 999964210 00 0 11 23679999999999999999999986
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=8.7e-39 Score=304.13 Aligned_cols=263 Identities=18% Similarity=0.246 Sum_probs=190.1
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHhhC--CCEEEEEeCcccccc-cccCC---CCCCCCeeEEEccCC-CCCCCCCCc
Q 022744 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHK--GLKVTLVTTYFISKS-LHRDS---SSPSTSISLEAISDG-YDEGGSAQT 84 (292)
Q Consensus 12 ~~~hvv~~p~p~~GH~~P~l~La~~La~r--G~~VT~itt~~~~~~-~~~~~---~~~~~~i~~~~l~~~-~~~~~~~~~ 84 (292)
+++||+++|+|++||++||++||++|++| ||+|||++|+.+... +.+.. .....+|+|+.+|++ ++. .+..
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~--~~~~ 85 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPP--QELL 85 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCC--GGGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCc--cccc
Confidence 35799999999999999999999999999 999999999875321 11100 012258999999975 332 1111
Q ss_pred cCHHHHHHHHHHhCcHHHHHHHHHhhcCCCCccEEEeCCCCccHHHHHHHhCCCcEEEeccchHHHHHHHHHhcCCC--C
Q 022744 85 EGVEAYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCVVDCIYYHVNKGLL--K 162 (292)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~~~~~--~ 162 (292)
.+....+......+...++++++++ . ..++||||+|.++.|+.++|+++|||+++|++++++.+++++|++.... +
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~ll~~~-~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 163 (463)
T 2acv_A 86 KSPEFYILTFLESLIPHVKATIKTI-L-SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEV 163 (463)
T ss_dssp GSHHHHHHHHHHHTHHHHHHHHHHH-C-CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCC
T ss_pred CCccHHHHHHHHhhhHHHHHHHHhc-c-CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCC
Confidence 2222112222344566788888776 2 2478999999999999999999999999999999999888888753221 1
Q ss_pred CCCCCc---ccccCCC-CCCCCCCCCCcccCCCCchhHHHHHHHHHhhccCCCCEEEEcchHHhhHhHHHHhcc----cC
Q 022744 163 LPLLDS---QLLLPGM-PPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEKEVAQWLGK----HW 234 (292)
Q Consensus 163 ~~~~~~---~~~iPg~-p~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNtf~eLE~~~~~~l~~----~~ 234 (292)
+...+. .+.+||+ ++++.+++|..+.+. . .+++.+.+ ..+..++++++++|||+|||+++++++++ ..
T Consensus 164 ~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~--~-~~~~~~~~-~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~ 239 (463)
T 2acv_A 164 FDDSDRDHQLLNIPGISNQVPSNVLPDACFNK--D-GGYIAYYK-LAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIP 239 (463)
T ss_dssp CCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT--T-THHHHHHH-HHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSC
T ss_pred CCCccccCceeECCCCCCCCChHHCchhhcCC--c-hHHHHHHH-HHHhcccCCEEEECCHHHHhHHHHHHHHhccccCC
Confidence 222222 4568999 889888998665543 1 24555666 67778899999999999999999998876 33
Q ss_pred CeeeeccCCCCccccccccccccCCcCCCCCCchhhhhhhccCCCCcEEEEEeCccc
Q 022744 235 SLKTIGPTIPSMYLDKQIEEDKDYGFSIFKPNNESCIKWLNDRANGLLFIYHLGVWQ 291 (292)
Q Consensus 235 ~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~WLD~q~~~SVvYVsFGS~~ 291 (292)
++++|||+++... . .... .+ |. ++.+|++|||+|+++|||||||||.+
T Consensus 240 ~v~~vGpl~~~~~---~-~~~~---~~-~~-~~~~~~~wl~~~~~~~vv~vs~GS~~ 287 (463)
T 2acv_A 240 PIYAVGPLLDLKG---Q-PNPK---LD-QA-QHDLILKWLDEQPDKSVVFLCFGSMG 287 (463)
T ss_dssp CEEECCCCCCSSC---C-CBTT---BC-HH-HHHHHHHHHHTSCTTCEEEEECCSSC
T ss_pred cEEEeCCCccccc---c-cccc---cc-cc-cchhHHHHHhcCCCCceEEEEecccc
Confidence 6999999975410 0 0000 00 11 24689999999999999999999986
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.90 E-value=2.7e-23 Score=194.26 Aligned_cols=249 Identities=15% Similarity=0.108 Sum_probs=140.1
Q ss_pred hhhcccCCCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccCCCCCCCCCC-
Q 022744 5 EKKAASCKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSAQ- 83 (292)
Q Consensus 5 ~~~~~~~~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~- 83 (292)
|.++.+++.+||++++++++||++|+++||++|+++||+|||++++.+.+.+.+ .+++|+.++++++. +...
T Consensus 4 ~~~~~~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~------~g~~~~~~~~~~~~-~~~~~ 76 (424)
T 2iya_A 4 EHRSASVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA------AGATPVVYDSILPK-ESNPE 76 (424)
T ss_dssp -------CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH------HTCEEEECCCCSCC-TTCTT
T ss_pred ccccCCcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh------CCCEEEecCccccc-cccch
Confidence 455555567899999999999999999999999999999999999887665543 27899988866554 2111
Q ss_pred ---ccCHHHHHHHHHHhCcHHHHHHHHHhhcCCCCccEEEeCCCCccHHHHHHHhCCCcEEEeccchHHHHHHHHHhcCC
Q 022744 84 ---TEGVEAYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCVVDCIYYHVNKGL 160 (292)
Q Consensus 84 ---~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~~~~ 160 (292)
..+....+..+.+.....+.++.+ +.++ .++||||+|.++.|+..+|+++|||++.+++.++........+....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~-~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~ 154 (424)
T 2iya_A 77 ESWPEDQESAMGLFLDEAVRVLPQLED-AYAD-DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQ 154 (424)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHH-HTTT-SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGS
T ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHH-HHhc-cCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccccc
Confidence 123333333333322223333333 3333 35699999999899999999999999999988753221111110000
Q ss_pred CCCCCCCcccccCCCCCCCCCCCCCcccCCCCchhHHHHHHHHHhhc----------cCCCCEEEEcchHHhhHhHHHHh
Q 022744 161 LKLPLLDSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDN----------IDKADWVLCNTFYELEKEVAQWL 230 (292)
Q Consensus 161 ~~~~~~~~~~~iPg~p~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~vlvNtf~eLE~~~~~~l 230 (292)
.+..+.+.....| ....+.............+.+.+.+ ..+. ...++++++|+++++|... ..+
T Consensus 155 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~-~~~ 228 (424)
T 2iya_A 155 DPTADRGEEAAAP----AGTGDAEEGAEAEDGLVRFFTRLSA-FLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG-DTV 228 (424)
T ss_dssp CCCC-------------------------HHHHHHHHHHHHH-HHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG-GGC
T ss_pred ccccccccccccc----cccccchhhhccchhHHHHHHHHHH-HHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc-cCC
Confidence 0000000000000 0000000000000000001111111 1111 1147889999999999863 112
Q ss_pred cccCCeeeeccCCCCccccccccccccCCcCCCCCCchhhhhhhccCCCCcEEEEEeCccc
Q 022744 231 GKHWSLKTIGPTIPSMYLDKQIEEDKDYGFSIFKPNNESCIKWLNDRANGLLFIYHLGVWQ 291 (292)
Q Consensus 231 ~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~WLD~q~~~SVvYVsFGS~~ 291 (292)
. .+++.|||++... ....+|++.++.++||||+|||.+
T Consensus 229 ~--~~~~~vGp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~ 266 (424)
T 2iya_A 229 G--DNYTFVGPTYGDR---------------------SHQGTWEGPGDGRPVLLIALGSAF 266 (424)
T ss_dssp C--TTEEECCCCCCCC---------------------GGGCCCCCCCSSCCEEEEECCSSS
T ss_pred C--CCEEEeCCCCCCc---------------------ccCCCCCccCCCCCEEEEEcCCCC
Confidence 1 2589999975420 012369998889999999999975
No 7
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.81 E-value=1.7e-20 Score=175.12 Aligned_cols=125 Identities=13% Similarity=0.180 Sum_probs=84.4
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccCCCCCCCCCC-ccCHHHHHH
Q 022744 14 VHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSAQ-TEGVEAYLE 92 (292)
Q Consensus 14 ~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~-~~~~~~~~~ 92 (292)
+||+++++++.||++|+++||++|++|||+|||+++....+.+.. .+++++.++....+ .... .......+.
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~------~g~~~~~i~~~~~~-~~~~~~~~~~~~~~ 73 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE------VGVPHVPVGPSARA-PIQRAKPLTAEDVR 73 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH------TTCCEEECCC--------CCSCCCHHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH------cCCeeeeCCCCHHH-HhhcccccchHHHH
Confidence 489999999999999999999999999999999999886554442 37899988754321 1111 111111111
Q ss_pred HHHHhCcHHHHHHHHHhhcCCCCccEEEeCC-CCcc--HHHHHHHhCCCcEEEeccchH
Q 022744 93 RFWQIGPRSLCELVENMNGSGVPVDCIVYDS-FLPW--ALDVAKKFGLVGAAFLTQSCV 148 (292)
Q Consensus 93 ~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~-~~~~--~~~vA~~lgiP~v~f~~~~a~ 148 (292)
.+ +...+.+.++++.+...++||||+|. +..| +..+|+++|||++.++++++.
T Consensus 74 ~~---~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~ 129 (415)
T 1iir_A 74 RF---TTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSY 129 (415)
T ss_dssp HH---HHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGG
T ss_pred HH---HHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCc
Confidence 11 11122333444331113579999998 6678 899999999999999988744
No 8
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.79 E-value=1.2e-18 Score=160.79 Aligned_cols=126 Identities=17% Similarity=0.144 Sum_probs=81.7
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccCCCCC------CCCC---
Q 022744 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDE------GGSA--- 82 (292)
Q Consensus 12 ~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~~~~------~~~~--- 82 (292)
+.++|+|+|+|++||++|+++||++|++|||+|||+|++....... .++.++.+..+... ....
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-------AGLCAVDVSPGVNYAKLFVPDDTDVTD 93 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-------TTCEEEESSTTCCSHHHHSCCC-----
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-------cCCeeEecCCchhHhhhcccccccccc
Confidence 4579999999999999999999999999999999999887654322 35666665432111 0000
Q ss_pred C----ccCHHHHHHHHHHhCcHHHHHHHHHhhcCCCCccEEEeCCCCccHHHHHHHhCCCcEEEeccc
Q 022744 83 Q----TEGVEAYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQS 146 (292)
Q Consensus 83 ~----~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~~~ 146 (292)
. ......+...+.......+.++++.+. +. ++|+||+|.+..|+..+|+++|||++.++...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~-~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~ 159 (400)
T 4amg_A 94 PMHSEGLGEGFFAEMFARVSAVAVDGALRTAR-SW-RPDLVVHTPTQGAGPLTAAALQLPCVELPLGP 159 (400)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHH-HH-CCSEEEECTTCTHHHHHHHHTTCCEEECCSST
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hc-CCCEEEECcchHHHHHHHHHcCCCceeecccc
Confidence 0 001111112222222222333333222 22 45999999999999999999999999876654
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.75 E-value=1.3e-18 Score=162.32 Aligned_cols=124 Identities=12% Similarity=0.070 Sum_probs=82.8
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccCCCCCCCCCC--ccCHHHHH
Q 022744 14 VHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSAQ--TEGVEAYL 91 (292)
Q Consensus 14 ~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~--~~~~~~~~ 91 (292)
+||+++++++.||++|++.||++|+++||+|||++++...+.+.. .+++++.++..... .... .......+
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~------~g~~~~~~~~~~~~-~~~~~~~~~~~~~~ 73 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE------VGVPHVPVGLPQHM-MLQEGMPPPPPEEE 73 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH------HTCCEEECSCCGGG-CCCTTSCCCCHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH------cCCeeeecCCCHHH-HHhhccccchhHHH
Confidence 489999999999999999999999999999999999876554442 37888888743211 1110 01111111
Q ss_pred HHHHHhCcHHHHHHHHHhhcCCCCccEEEeCCC-Ccc--HHHHHHHhCCCcEEEeccch
Q 022744 92 ERFWQIGPRSLCELVENMNGSGVPVDCIVYDSF-LPW--ALDVAKKFGLVGAAFLTQSC 147 (292)
Q Consensus 92 ~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~-~~~--~~~vA~~lgiP~v~f~~~~a 147 (292)
..+.. ..+.+.++.+.+...++||||+|.+ ..| +..+|+++|||++.+++.++
T Consensus 74 ~~~~~---~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~ 129 (416)
T 1rrv_A 74 QRLAA---MTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPV 129 (416)
T ss_dssp HHHHH---HHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGG
T ss_pred HHHHH---HHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCC
Confidence 11111 1223333333211135799999974 456 88999999999999988764
No 10
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.73 E-value=7.2e-17 Score=150.66 Aligned_cols=126 Identities=18% Similarity=0.202 Sum_probs=88.0
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccCCCCCCCCCC----ccCHH
Q 022744 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSAQ----TEGVE 88 (292)
Q Consensus 13 ~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~----~~~~~ 88 (292)
.+||++++.++.||++|++.|+++|+++||+||++++....+.+.. .+++++.++..++. +... ..+..
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~------~g~~~~~~~~~~~~-~~~~~~~~~~~~~ 79 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA------TGPRPVLYHSTLPG-PDADPEAWGSTLL 79 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT------TSCEEEECCCCSCC-TTSCGGGGCSSHH
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh------CCCEEEEcCCcCcc-ccccccccchhhH
Confidence 4699999999999999999999999999999999999876554432 37888888754432 2111 12332
Q ss_pred HHHHHHHHhCcHHHHHHHHHhhcCCCCccEEEeCCCCccHHHHHHHhCCCcEEEeccch
Q 022744 89 AYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSC 147 (292)
Q Consensus 89 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~~~a 147 (292)
..+..+...+...+..+.+.+ ++ .++||||+|.+..|+..+|+++|||++.+++...
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~l-~~-~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~ 136 (430)
T 2iyf_A 80 DNVEPFLNDAIQALPQLADAY-AD-DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLV 136 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TT-SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHh-hc-cCCCEEEECCccHHHHHHHHHcCCCEEEEecccc
Confidence 222222222222333333333 33 3569999999878999999999999999987654
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.61 E-value=2.2e-14 Score=132.01 Aligned_cols=126 Identities=20% Similarity=0.263 Sum_probs=87.0
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccCCCCCCC-C--CCccCHHH
Q 022744 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGG-S--AQTEGVEA 89 (292)
Q Consensus 13 ~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~--~~~~~~~~ 89 (292)
..||+++++++.||++|++.||++|+++||+|||+++....+.+.. .+++++.++..++... . ....+...
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~------~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA------AGAEVVLYKSEFDTFHVPEVVKQEDAET 77 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH------TTCEEEECCCGGGTSSSSSSSCCTTHHH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH------cCCEEEecccccccccccccccccchHH
Confidence 3599999999999999999999999999999999999876665543 3788888864332200 0 01122222
Q ss_pred HHHH-HHHhCcHHHHHHHHHhhcCCCCccEEEeC-CCCccHHHHHHHhCCCcEEEeccc
Q 022744 90 YLER-FWQIGPRSLCELVENMNGSGVPVDCIVYD-SFLPWALDVAKKFGLVGAAFLTQS 146 (292)
Q Consensus 90 ~~~~-~~~~~~~~l~~~l~~l~~~~~~~d~iI~D-~~~~~~~~vA~~lgiP~v~f~~~~ 146 (292)
.+.. +.......+.++.+.+ ++ .++|+||+| .+..|+..+|+++|||++.+.+..
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~l-~~-~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~ 134 (402)
T 3ia7_A 78 QLHLVYVRENVAILRAAEEAL-GD-NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGF 134 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TT-CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hc-cCCCEEEECchHHHHHHHHHHhhCCCEEEEeccc
Confidence 2222 3332223344444434 33 356999999 777899999999999999987544
No 12
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.57 E-value=5.2e-14 Score=130.51 Aligned_cols=126 Identities=14% Similarity=0.174 Sum_probs=85.9
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccCCCCCCCCC---CccCHHH
Q 022744 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSA---QTEGVEA 89 (292)
Q Consensus 13 ~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~---~~~~~~~ 89 (292)
.+||+++++++.||++|++.||++|+++||+|+|+++....+.+.. .+++++.++..++..... ...+...
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~------~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA------AGATVVPYQSEIIDADAAEVFGSDDLGV 93 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH------TTCEEEECCCSTTTCCHHHHHHSSSSCH
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh------cCCEEEeccccccccccchhhccccHHH
Confidence 4799999999999999999999999999999999998877666543 378999887544321000 0001101
Q ss_pred HHHH-HHHhCcHHHHHHHHHhhcCCCCccEEEeC-CCCccHHHHHHHhCCCcEEEeccc
Q 022744 90 YLER-FWQIGPRSLCELVENMNGSGVPVDCIVYD-SFLPWALDVAKKFGLVGAAFLTQS 146 (292)
Q Consensus 90 ~~~~-~~~~~~~~l~~~l~~l~~~~~~~d~iI~D-~~~~~~~~vA~~lgiP~v~f~~~~ 146 (292)
.+.. +.......+.++.+.+ ++. ++|+||+| .+..|+..+|+++|||++.+.+..
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~l-~~~-~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~ 150 (415)
T 3rsc_A 94 RPHLMYLRENVSVLRATAEAL-DGD-VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAF 150 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-SSS-CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hcc-CCCEEEECchhhhHHHHHHHHhCCCEEEEEecc
Confidence 1111 2222222333444333 333 46999999 777789999999999999987544
No 13
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.57 E-value=8.4e-14 Score=127.89 Aligned_cols=123 Identities=16% Similarity=0.117 Sum_probs=79.7
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccCCCC-CC------CCCC-c-
Q 022744 14 VHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYD-EG------GSAQ-T- 84 (292)
Q Consensus 14 ~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~~~-~~------~~~~-~- 84 (292)
+||++++.++.||++|++.|+++|+++||+||++++....+.+.. .+++++.++.... .. +... .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG------VGLPAVATTDLPIRHFITTDREGRPEAIP 74 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH------TTCCEEESCSSCHHHHHHBCTTSCBCCCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh------CCCEEEEeCCcchHHHHhhhcccCccccC
Confidence 489999999999999999999999999999999998875444332 3678887764220 00 0000 0
Q ss_pred cC--HHHHH-HH-HHHhCcHHHHHHHHHhhcCCCCccEEEeCCCCccHHHHHHHhCCCcEEEec
Q 022744 85 EG--VEAYL-ER-FWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLT 144 (292)
Q Consensus 85 ~~--~~~~~-~~-~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~ 144 (292)
.. ....+ .. +...+...+.++.+.+.+ .++|+||+|.+..|+..+|+++|||++.++.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~ 136 (384)
T 2p6p_A 75 SDPVAQARFTGRWFARMAASSLPRMLDFSRA--WRPDLIVGGTMSYVAPLLALHLGVPHARQTW 136 (384)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECC
T ss_pred cchHHHHHHHHHHHHhhHHHHHHHHHHHHhc--cCCcEEEECcchhhHHHHHHhcCCCEEEecc
Confidence 11 11111 11 111111223333333322 2469999999888899999999999998764
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.52 E-value=2.8e-13 Score=127.05 Aligned_cols=126 Identities=13% Similarity=0.099 Sum_probs=84.6
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccCCCCCCCC-----------
Q 022744 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGS----------- 81 (292)
Q Consensus 13 ~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~----------- 81 (292)
.+||++++.++.||++|++.||++|+++||+|||+++....+.+.. .+++++.++...+..+.
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~------~G~~~~~i~~~~~~~~~~~~~~~~~~~~ 93 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA------AGLTAVPVGTDVDLVDFMTHAGHDIIDY 93 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT------TTCCEEECSCCCCHHHHHHHTTHHHHHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh------CCCceeecCCccchHHHhhhhhcccccc
Confidence 4799999999999999999999999999999999999876554442 47899988743210000
Q ss_pred ----C-----Cc-cCHHHH---HHHHHHh----C-cH-HHHHHHHHhhcCCCCccEEEeCCCCccHHHHHHHhCCCcEEE
Q 022744 82 ----A-----QT-EGVEAY---LERFWQI----G-PR-SLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAF 142 (292)
Q Consensus 82 ----~-----~~-~~~~~~---~~~~~~~----~-~~-~l~~~l~~l~~~~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f 142 (292)
. .. .....+ ...+... . .. .+.++++.+.+ .++|+||+|.+..|+..+|+++|||++.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~aA~~lgiP~v~~ 171 (441)
T 2yjn_A 94 VRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK--WRPDLVIWEPLTFAAPIAAAVTGTPHARL 171 (441)
T ss_dssp HTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHHTCCEEEE
T ss_pred cccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh--cCCCEEEecCcchhHHHHHHHcCCCEEEE
Confidence 0 00 011111 1112111 1 12 44444443322 24699999998888999999999999998
Q ss_pred eccc
Q 022744 143 LTQS 146 (292)
Q Consensus 143 ~~~~ 146 (292)
....
T Consensus 172 ~~~~ 175 (441)
T 2yjn_A 172 LWGP 175 (441)
T ss_dssp CSSC
T ss_pred ecCC
Confidence 6544
No 15
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.15 E-value=2.3e-10 Score=105.52 Aligned_cols=121 Identities=17% Similarity=0.210 Sum_probs=81.1
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccCCCCC--------------
Q 022744 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDE-------------- 78 (292)
Q Consensus 13 ~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-------------- 78 (292)
.+||++++.++.||++|++.|+++|.++||+|+++++ ...+.+.. .+++++.++.....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~------~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA------AGLEVVDVAPDYSAVKVFEQVAKDNPRF 92 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT------TTCEEEESSTTCCHHHHHHHHHHHCHHH
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh------CCCeeEecCCccCHHHHhhhcccCCccc
Confidence 4799999999999999999999999999999999998 54444432 47888887632100
Q ss_pred ------CCCCCccCHHHHHHHHHHhCcHHHHHHHHHhhcCCCCccEEEeCCCCccHHHHHHHhCCCcEEEecc
Q 022744 79 ------GGSAQTEGVEAYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQ 145 (292)
Q Consensus 79 ------~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~~ 145 (292)
............+......+...+.+++++. ++|+||+|....++..+|+++|||++.....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~ 160 (398)
T 3oti_A 93 AETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY-----RPDLVVYEQGATVGLLAADRAGVPAVQRNQS 160 (398)
T ss_dssp HHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHTCCEEEECCT
T ss_pred cccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEECchhhHHHHHHHHcCCCEEEEecc
Confidence 0000011111112222222223334444432 4599999987778889999999999987654
No 16
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.09 E-value=8.4e-11 Score=109.07 Aligned_cols=121 Identities=16% Similarity=0.215 Sum_probs=79.2
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccCCCCCC-CC--CCccCHHHH
Q 022744 14 VHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEG-GS--AQTEGVEAY 90 (292)
Q Consensus 14 ~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~~--~~~~~~~~~ 90 (292)
+||++++.++.||++|++.||++|.++||+|+|+++....+.+.+ .+++++.++...... +. .......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~------~g~~~~~l~~~~~~~~~~~~~~~~~~~-- 72 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE------VGVPMVPVGRAVRAGAREPGELPPGAA-- 72 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH------TTCCEEECSSCSSGGGSCTTCCCTTCG--
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH------cCCceeecCCCHHHHhccccCCHHHHH--
Confidence 479999999999999999999999999999999998876655543 378888876322110 00 0001111
Q ss_pred HHHHHHhCcHHHHHHHHHhhcCCCCccEEEeCCCCccH---HHHHHHhCCCcEEEeccch
Q 022744 91 LERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWA---LDVAKKFGLVGAAFLTQSC 147 (292)
Q Consensus 91 ~~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~~~~---~~vA~~lgiP~v~f~~~~a 147 (292)
..+.......++++.+.+ ..+|+||+|....++ ..+|+++|||++.++..+.
T Consensus 73 -~~~~~~~~~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~ 127 (404)
T 3h4t_A 73 -EVVTEVVAEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPD 127 (404)
T ss_dssp -GGHHHHHHHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGG
T ss_pred -HHHHHHHHHHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCc
Confidence 111111122233333222 136999999765544 7899999999998777654
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.04 E-value=4.9e-10 Score=103.17 Aligned_cols=127 Identities=13% Similarity=0.137 Sum_probs=80.5
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccCCCC--------CCCCC-
Q 022744 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYD--------EGGSA- 82 (292)
Q Consensus 12 ~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~~~--------~~~~~- 82 (292)
..+||++++.++.||++|++.|+++|+++||+|+++++....+.+.. .+++++.++.... ..+..
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~------~G~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG------AGLPFAPTCPSLDMPEVLSWDREGNRT 87 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH------TTCCEEEEESSCCHHHHHSBCTTSCBC
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh------CCCeeEecCCccchHhhhhhhccCccc
Confidence 35799999999999999999999999999999999998765554443 3677777652100 00000
Q ss_pred -CccCH----HHHHHHHHHhCcHHHHHHHHHhhcCCCCccEEEeCCCCccHHHHHHHhCCCcEEEeccc
Q 022744 83 -QTEGV----EAYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQS 146 (292)
Q Consensus 83 -~~~~~----~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~~~ 146 (292)
..... ......+.......+.++.+.+ ++ .++|+||+|....++..+|+++|||++.+....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~-~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~ 154 (398)
T 4fzr_A 88 TMPREEKPLLEHIGRGYGRLVLRMRDEALALA-ER-WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRL 154 (398)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSS
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHH-Hh-CCCCEEEECccccHHHHHHHhhCCCEEEeccCC
Confidence 00011 1111112221122222332222 22 246999999877888999999999999876553
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=98.98 E-value=1.4e-09 Score=99.80 Aligned_cols=126 Identities=13% Similarity=0.070 Sum_probs=76.9
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEc-cCCC----------CCCCC
Q 022744 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAI-SDGY----------DEGGS 81 (292)
Q Consensus 13 ~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l-~~~~----------~~~~~ 81 (292)
++||+++..++.||++|++.|+++|.++||+|+++++....+.+.. .+++++.+ +... +....
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG------AGLTTAGIRGNDRTGDTGGTTQLRFPNP 74 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH------BTCEEEEC--------------CCSCCG
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh------CCCceeeecCCccchhhhhhhccccccc
Confidence 3689999999999999999999999999999999998765544432 36777766 3211 00000
Q ss_pred C-C-c--cCHHHHHHHHHHhC----cHHHHHHHHHhhcCCCCccEEEeCCCCccHHHHHHHhCCCcEEEeccc
Q 022744 82 A-Q-T--EGVEAYLERFWQIG----PRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQS 146 (292)
Q Consensus 82 ~-~-~--~~~~~~~~~~~~~~----~~~l~~~l~~l~~~~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~~~ 146 (292)
. . . ......+......+ ...+.++.+.+ ++. ++|+||+|.+..++..+|+++|||.+.+....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~-~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~ 145 (391)
T 3tsa_A 75 AFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLA-EAW-RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGV 145 (391)
T ss_dssp GGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-CCSEEEEETTCHHHHHHHHHTTCCEEEECCSC
T ss_pred ccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHH-Hhc-CCCEEEeCcchhHHHHHHHHhCCCEEEEecCC
Confidence 0 0 0 00111111111111 00122222222 222 45999999876778889999999999975543
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=98.87 E-value=6.3e-09 Score=95.80 Aligned_cols=124 Identities=21% Similarity=0.147 Sum_probs=79.6
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccCC----C--------CCC
Q 022744 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDG----Y--------DEG 79 (292)
Q Consensus 12 ~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~----~--------~~~ 79 (292)
.++||++++.++.||++|++.|+++|+++||+|+++++....+.+.. .+++++.++.. + ...
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK------LGFEPVATGMPVFDGFLAALRIRFDTD 92 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH------TTCEEEECCCCHHHHHHHHHHHHHSCS
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh------cCCceeecCcccccchhhhhhhhhccc
Confidence 35899999999999999999999999999999999998765433332 37888887631 0 000
Q ss_pred CCCC------ccCHHHHHHHH-HHhCcHHHHHHHHHhhcCCCCccEEEeCCCCccHHHHHHHhCCCcEEEeccc
Q 022744 80 GSAQ------TEGVEAYLERF-WQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQS 146 (292)
Q Consensus 80 ~~~~------~~~~~~~~~~~-~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~~~ 146 (292)
+... .......+... ...+...+.+++++. +||+||+|.+..++..+|+++|||.+......
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~ 161 (412)
T 3otg_A 93 SPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL-----RPDLVVQEISNYGAGLAALKAGIPTICHGVGR 161 (412)
T ss_dssp CCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHTCCEEEECCSC
T ss_pred CCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc-----CCCEEEECchhhHHHHHHHHcCCCEEEecccc
Confidence 0000 01111111111 111112233333332 46999999777778888999999999865543
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.35 E-value=2.7e-06 Score=77.70 Aligned_cols=116 Identities=17% Similarity=0.130 Sum_probs=67.1
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCccccc--ccccCCCCCCCCeeEEEccC-CCCCCCCCCccCHHH
Q 022744 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISK--SLHRDSSSPSTSISLEAISD-GYDEGGSAQTEGVEA 89 (292)
Q Consensus 13 ~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~--~~~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~ 89 (292)
+.+|++..-..-||++|.+.||++|.++||+|+|+++....+ .++. .+++++.++. +++..+. ...+..
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~------~g~~~~~i~~~~~~~~~~--~~~~~~ 73 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK------AGLPLHLIQVSGLRGKGL--KSLVKA 73 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG------GTCCEEECC----------------C
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh------cCCcEEEEECCCcCCCCH--HHHHHH
Confidence 457777665555999999999999999999999999765322 2222 3677887762 3321010 011111
Q ss_pred HHHHHHHhCcHHHHHHHHHhhcCCCCccEEEeCCCCcc--HHHHHHHhCCCcEEEe
Q 022744 90 YLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPW--ALDVAKKFGLVGAAFL 143 (292)
Q Consensus 90 ~~~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~~~--~~~vA~~lgiP~v~f~ 143 (292)
.+..+.. . .....++++. +||+||++..... +...|+.+|||.++.-
T Consensus 74 ~~~~~~~-~-~~~~~~l~~~-----~PDvVi~~g~~~s~p~~laA~~~~iP~vihe 122 (365)
T 3s2u_A 74 PLELLKS-L-FQALRVIRQL-----RPVCVLGLGGYVTGPGGLAARLNGVPLVIHE 122 (365)
T ss_dssp HHHHHHH-H-HHHHHHHHHH-----CCSEEEECSSSTHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHH-H-HHHHHHHHhc-----CCCEEEEcCCcchHHHHHHHHHcCCCEEEEe
Confidence 1111111 1 1223344443 4599999976653 3456788999999753
No 21
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=97.39 E-value=0.0011 Score=59.25 Aligned_cols=114 Identities=18% Similarity=0.153 Sum_probs=69.2
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccc--cccccCCCCCCCCeeEEEccC-CCCCCCCCCccCHHH
Q 022744 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFIS--KSLHRDSSSPSTSISLEAISD-GYDEGGSAQTEGVEA 89 (292)
Q Consensus 13 ~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~--~~~~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~ 89 (292)
.++|+++....-||..+++.|++.|+++||+|++++..... ..+. ..++++..++. +++. .....
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~------~~~~~ 73 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVP------KHGIEIDFIRISGLRG------KGIKA 73 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGG------GGTCEEEECCCCCCTT------CCHHH
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcc------ccCCceEEecCCccCc------CccHH
Confidence 37899998776799999999999999999999999876532 1121 13677777652 1211 11111
Q ss_pred HHH---HHHHhCcHHHHHHHHHhhcCCCCccEEEeCCCCc--cHHHHHHHhCCCcEEEec
Q 022744 90 YLE---RFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLP--WALDVAKKFGLVGAAFLT 144 (292)
Q Consensus 90 ~~~---~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~~--~~~~vA~~lgiP~v~f~~ 144 (292)
.+. ..... ...+...+++. ++|+|+++.... ++..+|+.+|+|.++...
T Consensus 74 ~~~~~~~~~~~-~~~l~~~l~~~-----~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 127 (364)
T 1f0k_A 74 LIAAPLRIFNA-WRQARAIMKAY-----KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQ 127 (364)
T ss_dssp HHTCHHHHHHH-HHHHHHHHHHH-----CCSEEEECSSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHH-HHHHHHHHHhc-----CCCEEEEeCCcCchHHHHHHHHcCCCEEEEec
Confidence 100 00111 11233334332 469999986442 345677888999987543
No 22
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=95.88 E-value=0.13 Score=46.51 Aligned_cols=130 Identities=13% Similarity=0.161 Sum_probs=67.3
Q ss_pred CCceEEEEeCC-----CccChHHHHHHHHHHhhCCCEEEEEeCcccccccc---------cC-----CCCCCCCeeEEEc
Q 022744 12 KRVHCLVLSYP-----AQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLH---------RD-----SSSPSTSISLEAI 72 (292)
Q Consensus 12 ~~~hvv~~p~p-----~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~---------~~-----~~~~~~~i~~~~l 72 (292)
++++|+++..- .-|--.-+.+|++.|+++||+|+++++......-. .. ......++++..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 35788888732 34555668999999999999999999654221100 00 0001246777766
Q ss_pred cCCC-CCCCCCCccCHH-HHHHHHHHhCcHHHHHHHHHhhcCCCCccEEEeCCCCc-c-HHHHHHHhCCCcEEEec
Q 022744 73 SDGY-DEGGSAQTEGVE-AYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLP-W-ALDVAKKFGLVGAAFLT 144 (292)
Q Consensus 73 ~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~~-~-~~~vA~~lgiP~v~f~~ 144 (292)
+... ...+. ..... .+...+... ...+...++.+.....++|+|.+-.... . +..+++..|+|.+...-
T Consensus 81 ~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h 153 (439)
T 3fro_A 81 GGGLLDSEDV--YGPGWDGLIRKAVTF-GRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIH 153 (439)
T ss_dssp ESGGGGCSST--TCSHHHHHHHHHHHH-HHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEES
T ss_pred cchhcccccc--ccCCcchhhhhhHHH-HHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEec
Confidence 5311 10000 01011 111121111 1233444444422224579988864433 2 34566778999887443
No 23
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=94.90 E-value=0.059 Score=49.09 Aligned_cols=124 Identities=17% Similarity=0.129 Sum_probs=65.9
Q ss_pred CCCceEEEEeC---C--------CccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccCCCCCC
Q 022744 11 CKRVHCLVLSY---P--------AQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEG 79 (292)
Q Consensus 11 ~~~~hvv~~p~---p--------~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~ 79 (292)
.+.++|+++.. | .-|+-..+..|++.|+++||+|++++.......-... ....+++++.++.....
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~--~~~~~v~v~~~~~~~~~- 94 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV--RVAENLRVINIAAGPYE- 94 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE--EEETTEEEEEECCSCSS-
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc--cccCCeEEEEecCCCcc-
Confidence 34578999984 2 3588899999999999999999999875432110000 01246888777632111
Q ss_pred CCCCccCHHHHHHHHHHhCcHHHHHHHHHhhcCCCCccEEEeCCCCc--cHHHHHHHhCCCcEEEecc
Q 022744 80 GSAQTEGVEAYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLP--WALDVAKKFGLVGAAFLTQ 145 (292)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~~--~~~~vA~~lgiP~v~f~~~ 145 (292)
... .......+..+.. ..++..++. . ..+|+|++..... .+..+++.+|+|.+...-.
T Consensus 95 ~~~-~~~~~~~~~~~~~---~~~~~~~~~---~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~ 154 (438)
T 3c48_A 95 GLS-KEELPTQLAAFTG---GMLSFTRRE---K-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHT 154 (438)
T ss_dssp SCC-GGGGGGGHHHHHH---HHHHHHHHH---T-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred ccc-hhHHHHHHHHHHH---HHHHHHHhc---c-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecC
Confidence 111 1111111111111 111111222 1 2379998865332 2334677889998875443
No 24
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=90.64 E-value=2.7 Score=37.29 Aligned_cols=112 Identities=15% Similarity=0.198 Sum_probs=61.1
Q ss_pred CceEEEEeCCCc-cChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccC-CCCCCCCCCccCHHHH
Q 022744 13 RVHCLVLSYPAQ-GHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISD-GYDEGGSAQTEGVEAY 90 (292)
Q Consensus 13 ~~hvv~~p~p~~-GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~ 90 (292)
++.+....+|.. |.-.-+..|++.|+++||+|++++...... .. ....++++..++. ..+. ... ... .
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~----~~~~~i~~~~~~~~~~~~--~~~-~~~--~ 84 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LN----KVYPNIYFHEVTVNQYSV--FQY-PPY--D 84 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC---------CCCTTEEEECCCCC------CCS-CCH--H
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cc----ccCCceEEEecccccccc--ccc-ccc--c
Confidence 566778888765 677888899999999999999998754221 11 1234677766542 1110 000 011 0
Q ss_pred HHHHHHhCcHHHHHHHHHhhcCCCCccEEEeCCCCc--cHHHHHHHh---CCCcEEEec
Q 022744 91 LERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLP--WALDVAKKF---GLVGAAFLT 144 (292)
Q Consensus 91 ~~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~~--~~~~vA~~l---giP~v~f~~ 144 (292)
... ...+...+++. ++|+|++-.... +...+++++ ++|.+...-
T Consensus 85 ~~~-----~~~l~~~l~~~-----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h 133 (394)
T 2jjm_A 85 LAL-----ASKMAEVAQRE-----NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLH 133 (394)
T ss_dssp HHH-----HHHHHHHHHHH-----TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECC
T ss_pred HHH-----HHHHHHHHHHc-----CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEe
Confidence 101 11234444432 469999864443 334455554 589876543
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=90.20 E-value=0.6 Score=41.35 Aligned_cols=110 Identities=12% Similarity=0.099 Sum_probs=64.7
Q ss_pred CCceEEEEeC--C--CccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccCCCCCCCCCCccCH
Q 022744 12 KRVHCLVLSY--P--AQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSAQTEGV 87 (292)
Q Consensus 12 ~~~hvv~~p~--p--~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 87 (292)
++++|+++.. + .-|+-.-+..|++.| +||+|++++........... ....+++++.++..... ...
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~ 72 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY--DKTLDYEVIRWPRSVML------PTP 72 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH--HTTCSSEEEEESSSSCC------SCH
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh--ccccceEEEEccccccc------cch
Confidence 4567888864 3 458888999999999 79999999876543210000 01246777776532111 111
Q ss_pred HHHHHHHHHhCcHHHHHHHHHhhcCCCCccEEEeCCCC--ccHHHHHHHhCCCcEEEecc
Q 022744 88 EAYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFL--PWALDVAKKFGLVGAAFLTQ 145 (292)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~--~~~~~vA~~lgiP~v~f~~~ 145 (292)
.. ...+..++++. ++|+|++.... .+....++++|+|.+++..-
T Consensus 73 -----~~----~~~l~~~~~~~-----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h 118 (394)
T 3okp_A 73 -----TT----AHAMAEIIRER-----EIDNVWFGAAAPLALMAGTAKQAGASKVIASTH 118 (394)
T ss_dssp -----HH----HHHHHHHHHHT-----TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECC
T ss_pred -----hh----HHHHHHHHHhc-----CCCEEEECCcchHHHHHHHHHhcCCCcEEEEec
Confidence 00 11233444432 46999875443 35677789999996554333
No 26
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=84.72 E-value=1.8 Score=43.36 Aligned_cols=135 Identities=16% Similarity=0.165 Sum_probs=69.0
Q ss_pred hhhhhcccCC-CceEEEEeCCCc-------------cChHHHH--------HHHHHHhhCCCEEE----EEeCccccccc
Q 022744 3 NIEKKAASCK-RVHCLVLSYPAQ-------------GHINPLL--------QFAKRLEHKGLKVT----LVTTYFISKSL 56 (292)
Q Consensus 3 ~~~~~~~~~~-~~hvv~~p~p~~-------------GH~~P~l--------~La~~La~rG~~VT----~itt~~~~~~~ 56 (292)
|+|+-..+-+ ..+|++++.=+. |...=.+ +||++|+++||+|| ++|-......-
T Consensus 267 ~~~~~~~~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g 346 (816)
T 3s28_A 267 TLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVG 346 (816)
T ss_dssp HHHHHHHHSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTT
T ss_pred cHHHHhccCCceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCC
Confidence 4555544433 468999987664 4444444 58888899999988 77654322110
Q ss_pred ccCC-----CCCCCCeeEEEccCCCCC---CCCCCccCHHHHHHHHHHhCcHHHHHHHHHhhcCCCCccEEEeCCCC-c-
Q 022744 57 HRDS-----SSPSTSISLEAISDGYDE---GGSAQTEGVEAYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFL-P- 126 (292)
Q Consensus 57 ~~~~-----~~~~~~i~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~-~- 126 (292)
.... -...++++++.+|-+-.. ...-....+..++..+.. ..+..+++.. ..++|+|.+-... .
T Consensus 347 ~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~---~~l~~il~~~---~~~PDVIHsH~~~sgl 420 (816)
T 3s28_A 347 TTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTE---DAAVELSKEL---NGKPDLIIGNYSDGNL 420 (816)
T ss_dssp SSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHH---HHHHHHHHHC---SSCCSEEEEEHHHHHH
T ss_pred CccCCcceeecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHH---HHHHHHHHhc---CCCCeEEEeCCchHHH
Confidence 0000 011247888887732110 011111122222222221 1233333332 2357999874322 2
Q ss_pred cHHHHHHHhCCCcEEEe
Q 022744 127 WALDVAKKFGLVGAAFL 143 (292)
Q Consensus 127 ~~~~vA~~lgiP~v~f~ 143 (292)
.+..+|+++|||.+...
T Consensus 421 va~llar~~gvP~V~T~ 437 (816)
T 3s28_A 421 VASLLAHKLGVTQCTIA 437 (816)
T ss_dssp HHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHcCCCEEEEE
Confidence 24577889999988743
No 27
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=84.71 E-value=1 Score=39.19 Aligned_cols=39 Identities=15% Similarity=0.099 Sum_probs=31.9
Q ss_pred CceEEEEeCC----------------CccChHHHHHHHHHHhhCCCEEEEEeCcc
Q 022744 13 RVHCLVLSYP----------------AQGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (292)
Q Consensus 13 ~~hvv~~p~p----------------~~GH~~P~l~La~~La~rG~~VT~itt~~ 51 (292)
+++|+++... .-|.-.-+..|++.|+++||+|++++...
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~ 57 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPG 57 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTT
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 4678887654 25777889999999999999999998765
No 28
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=84.25 E-value=1.4 Score=39.43 Aligned_cols=44 Identities=14% Similarity=0.064 Sum_probs=34.5
Q ss_pred cccCCCceEEEEeCCC--ccChHHHHHHHHHHhhCCCEEEEEeCcc
Q 022744 8 AASCKRVHCLVLSYPA--QGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (292)
Q Consensus 8 ~~~~~~~hvv~~p~p~--~GH~~P~l~La~~La~rG~~VT~itt~~ 51 (292)
....++++|+++.... -|+-..+..|++.|+++||+|++++...
T Consensus 35 ~~~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~ 80 (416)
T 2x6q_A 35 AEKLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEG 80 (416)
T ss_dssp HHTTTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred hhhhhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccC
Confidence 3345667888776543 4888999999999999999999987654
No 29
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=83.05 E-value=1.1 Score=41.59 Aligned_cols=122 Identities=13% Similarity=0.070 Sum_probs=66.1
Q ss_pred CceEEEEeC---C------------CccChHHHHHHHHHHhhCCCEEEEEeCcccccc-------cccCCCCCCCCeeEE
Q 022744 13 RVHCLVLSY---P------------AQGHINPLLQFAKRLEHKGLKVTLVTTYFISKS-------LHRDSSSPSTSISLE 70 (292)
Q Consensus 13 ~~hvv~~p~---p------------~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~-------~~~~~~~~~~~i~~~ 70 (292)
+++|+++.. | .-|.-.-+..|++.|+++||+|++++....... +... ....+++++
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~--~~~~gv~v~ 84 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYY--QETNKVRIV 84 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEEC--TTCSSEEEE
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhc--cCCCCeEEE
Confidence 478999874 2 347778899999999999999999986542211 1100 012578888
Q ss_pred EccCCCCCCCCCCccCHHHHHHHHHHhCcHHHHHHHHHhhcCCCCccEEEeCCCCc--cHHHHHHHhCCCcEEEecc
Q 022744 71 AISDGYDEGGSAQTEGVEAYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLP--WALDVAKKFGLVGAAFLTQ 145 (292)
Q Consensus 71 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~~--~~~~vA~~lgiP~v~f~~~ 145 (292)
.++..... ... ..........+. ..+...+++. ..++|+|.+-.... .+..+++.+|+|.+...-.
T Consensus 85 ~~~~~~~~-~~~-~~~~~~~~~~~~----~~l~~~l~~~---~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~ 152 (499)
T 2r60_A 85 RIPFGGDK-FLP-KEELWPYLHEYV----NKIINFYREE---GKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHS 152 (499)
T ss_dssp EECCSCSS-CCC-GGGCGGGHHHHH----HHHHHHHHHH---TCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSS
T ss_pred EecCCCcC-CcC-HHHHHHHHHHHH----HHHHHHHHhc---CCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccC
Confidence 87632111 010 011100111111 1223333332 12469888754322 2344677889998864433
No 30
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=82.26 E-value=1.1 Score=40.88 Aligned_cols=41 Identities=20% Similarity=0.227 Sum_probs=30.9
Q ss_pred CCCceEEEEeCCCc-----cChHHHHHHHHHHhhCCCEEEEEeCcc
Q 022744 11 CKRVHCLVLSYPAQ-----GHINPLLQFAKRLEHKGLKVTLVTTYF 51 (292)
Q Consensus 11 ~~~~hvv~~p~p~~-----GH~~P~l~La~~La~rG~~VT~itt~~ 51 (292)
.++++|+++..... |=.+-+.+||++|+++||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 45678887764322 333568999999999999999999753
No 31
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=80.44 E-value=1.6 Score=38.29 Aligned_cols=51 Identities=14% Similarity=0.225 Sum_probs=36.4
Q ss_pred eEEEEe---CCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEcc
Q 022744 15 HCLVLS---YPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAIS 73 (292)
Q Consensus 15 hvv~~p---~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~ 73 (292)
+|+++. .|.-|.-.-+..|++.|+++||+|++++...... ...+++++.++
T Consensus 2 kIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~--------~~~~~~v~~~~ 55 (374)
T 2iw1_A 2 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGD--------CPKAFELIQVP 55 (374)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSC--------CCTTCEEEECC
T ss_pred eEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCC--------CCCCcEEEEEc
Confidence 455553 3456788889999999999999999999764221 11367777664
No 32
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=79.82 E-value=9.5 Score=32.37 Aligned_cols=99 Identities=12% Similarity=0.101 Sum_probs=52.4
Q ss_pred HHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccCCCCCCCCCCccCHHHHHHHHHHhCcHHHHHHHHHh
Q 022744 30 LLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSAQTEGVEAYLERFWQIGPRSLCELVENM 109 (292)
Q Consensus 30 ~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l 109 (292)
+..|++.|.+.| +|+++.+..+++....+.. -...+++..+.... .. .....+.- .+.-.+..+
T Consensus 17 i~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT-~~~pl~~~~~~~~~---~~-~v~GTPaD----------CV~lal~~~ 80 (251)
T 2wqk_A 17 INALREALKSLG-RVVVVAPDRNLSGVGHSLT-FTEPLKMRKIDTDF---YT-VIDGTPAD----------CVHLGYRVI 80 (251)
T ss_dssp HHHHHHHHTTTS-EEEEEEESSCCTTSCCSCC-CSSCEEEEEEETTE---EE-ETTCCHHH----------HHHHHHHTT
T ss_pred HHHHHHHHHhCC-CEEEEeeCCCCcccccCcC-CCCCceeEEeeccc---ee-ecCCChHH----------HHhhhhhhh
Confidence 567889999998 6998888776654433211 11235555443210 00 00011110 111112233
Q ss_pred hcCCCCccEEEe----------CCCCcc---HHHHHHHhCCCcEEEecc
Q 022744 110 NGSGVPVDCIVY----------DSFLPW---ALDVAKKFGLVGAAFLTQ 145 (292)
Q Consensus 110 ~~~~~~~d~iI~----------D~~~~~---~~~vA~~lgiP~v~f~~~ 145 (292)
..+ ++||+||+ |.+++. ++.-|.-+|||.|.|+-.
T Consensus 81 l~~-~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 81 LEE-KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp TTT-CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCC-CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 222 35699999 555443 345566789999998854
No 33
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=78.09 E-value=2.5 Score=37.36 Aligned_cols=42 Identities=17% Similarity=0.166 Sum_probs=31.8
Q ss_pred CCCceEEEEeC---CC-ccChHHHHHHHHHHhhCCCEEEEEeCccc
Q 022744 11 CKRVHCLVLSY---PA-QGHINPLLQFAKRLEHKGLKVTLVTTYFI 52 (292)
Q Consensus 11 ~~~~hvv~~p~---p~-~GH~~P~l~La~~La~rG~~VT~itt~~~ 52 (292)
.++++|+++.. +. -|+-.-+..|++.|+++||+|++++....
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 63 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASP 63 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCT
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCc
Confidence 34568888863 22 46778899999999999999999988654
No 34
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=77.69 E-value=7.6 Score=34.01 Aligned_cols=36 Identities=14% Similarity=0.030 Sum_probs=25.4
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHhhC-CCEEEEEeCc
Q 022744 14 VHCLVLSYPAQGHINPLLQFAKRLEHK-GLKVTLVTTY 50 (292)
Q Consensus 14 ~hvv~~p~p~~GH~~P~l~La~~La~r-G~~VT~itt~ 50 (292)
++|+++.-. .+....+..|++.|.++ ||+|.++++.
T Consensus 6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~ 42 (376)
T 1v4v_A 6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTG 42 (376)
T ss_dssp EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECS
T ss_pred eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcC
Confidence 578887633 33345567889999998 7998877654
No 35
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=76.78 E-value=2.8 Score=39.67 Aligned_cols=39 Identities=10% Similarity=0.187 Sum_probs=29.3
Q ss_pred CCceEEEEeCCC------ccChHHHHHHHHHHhhCCCEEEEEeCc
Q 022744 12 KRVHCLVLSYPA------QGHINPLLQFAKRLEHKGLKVTLVTTY 50 (292)
Q Consensus 12 ~~~hvv~~p~p~------~GH~~P~l~La~~La~rG~~VT~itt~ 50 (292)
..+||++++.=. -|=-.-+-.|+++|+++||+|+++++.
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 468999996422 122245678999999999999999864
No 36
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=73.46 E-value=7.1 Score=33.69 Aligned_cols=86 Identities=16% Similarity=0.177 Sum_probs=52.1
Q ss_pred CCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccCCCCCCCCCCccCHHHHHHHHHHhCcHH
Q 022744 22 PAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSAQTEGVEAYLERFWQIGPRS 101 (292)
Q Consensus 22 p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (292)
-|.||+.=.+.||++|. +|+|++.......+.. -++.+..++. .+.. .
T Consensus 13 IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~------~g~~v~~l~~----------~d~~------------~ 60 (282)
T 3hbm_A 13 IGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDE------IPYPVYELSS----------ESIY------------E 60 (282)
T ss_dssp TBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGG------CCSCEEECSS----------SCHH------------H
T ss_pred ccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHH------CCCeEEEcCc----------cCHH------------H
Confidence 47899999999999999 7999886543222221 1444444331 1111 1
Q ss_pred HHHHHHHhhcCCCCccEEEeCCCCc---cHHHHHHHhCCCcEEEec
Q 022744 102 LCELVENMNGSGVPVDCIVYDSFLP---WALDVAKKFGLVGAAFLT 144 (292)
Q Consensus 102 l~~~l~~l~~~~~~~d~iI~D~~~~---~~~~vA~~lgiP~v~f~~ 144 (292)
+.+.+++. ++|+||.|.... |...+.+..|++.+.|--
T Consensus 61 ~~~~l~~~-----~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iDD 101 (282)
T 3hbm_A 61 LINLIKEE-----KFELLIIDHYGISVDDEKLIKLETGVKILSFDD 101 (282)
T ss_dssp HHHHHHHH-----TCSEEEEECTTCCHHHHHHHHHHHCCEEEEECS
T ss_pred HHHHHHhC-----CCCEEEEECCCCCHHHHHHHHHhcCcEEEEEec
Confidence 23334333 359999998864 555555556887776543
No 37
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=73.20 E-value=33 Score=29.59 Aligned_cols=102 Identities=10% Similarity=0.016 Sum_probs=64.2
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHhhC--CCEEEEEeCcccccccccCCCCCCCCee-EEEccCCCCCCCCCCccCHHHH
Q 022744 14 VHCLVLSYPAQGHINPLLQFAKRLEHK--GLKVTLVTTYFISKSLHRDSSSPSTSIS-LEAISDGYDEGGSAQTEGVEAY 90 (292)
Q Consensus 14 ~hvv~~p~p~~GH~~P~l~La~~La~r--G~~VT~itt~~~~~~~~~~~~~~~~~i~-~~~l~~~~~~~~~~~~~~~~~~ 90 (292)
++|+++-.-+.|-+.-...+.+.|.++ +.+|++++.+...+.+. ..+.++ ++.++. .. . ....
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~-----~~p~i~~v~~~~~--~~-~---~~~~--- 66 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLS-----RMPEVNEAIPMPL--GH-G---ALEI--- 66 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHT-----TCTTEEEEEEC-------------CH---
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHh-----cCCccCEEEEecC--Cc-c---ccch---
Confidence 378999988889999999999999986 89999999987665443 234563 343321 10 0 0001
Q ss_pred HHHHHHhCcHHHHHHHHHhhcCCCCccEEEeCCCCc-cHHHHHHHhCCCcEE
Q 022744 91 LERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLP-WALDVAKKFGLVGAA 141 (292)
Q Consensus 91 ~~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~~-~~~~vA~~lgiP~v~ 141 (292)
..+.++.+.+.+ .++|++| |.... -...++...|+|..+
T Consensus 67 ---------~~~~~l~~~l~~--~~~D~vi-d~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 67 ---------GERRKLGHSLRE--KRYDRAY-VLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp ---------HHHHHHHHHTTT--TTCSEEE-ECSCCSGGGHHHHHTTCSEEE
T ss_pred ---------HHHHHHHHHHHh--cCCCEEE-ECCCChHHHHHHHHhCCCEEe
Confidence 122344445533 3689988 54433 355677778999743
No 38
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=72.65 E-value=3.5 Score=37.74 Aligned_cols=38 Identities=18% Similarity=0.314 Sum_probs=28.5
Q ss_pred ceEEEEeC---C---CccChHHHHHHHHHHhhCCCEEEEEeCcc
Q 022744 14 VHCLVLSY---P---AQGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (292)
Q Consensus 14 ~hvv~~p~---p---~~GH~~P~l~La~~La~rG~~VT~itt~~ 51 (292)
++|+++.. | .-|=-.-+..|++.|+++||+|+++++..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 36777754 2 23555678899999999999999998643
No 39
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=71.22 E-value=4.1 Score=37.27 Aligned_cols=38 Identities=13% Similarity=0.240 Sum_probs=28.0
Q ss_pred ceEEEEeC---C---CccChHHHHHHHHHHhhCCCEEEEEeCcc
Q 022744 14 VHCLVLSY---P---AQGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (292)
Q Consensus 14 ~hvv~~p~---p---~~GH~~P~l~La~~La~rG~~VT~itt~~ 51 (292)
++|+++.. | .-|=-.-+..|++.|+++||+|+++++..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 36777753 2 22445667899999999999999998653
No 40
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=71.10 E-value=4.4 Score=31.88 Aligned_cols=39 Identities=23% Similarity=0.273 Sum_probs=35.3
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCc
Q 022744 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (292)
Q Consensus 12 ~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~ 50 (292)
++++|++.+.++-+|-.-..-++..|..+|++|.++-..
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 468999999999999999999999999999999987543
No 41
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=67.46 E-value=9.5 Score=28.93 Aligned_cols=39 Identities=8% Similarity=0.065 Sum_probs=34.9
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCc
Q 022744 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (292)
Q Consensus 12 ~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~ 50 (292)
++.++++.+.++-+|-.-..-++..|..+|++|.++...
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 457899999999999999999999999999999987654
No 42
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=64.35 E-value=7 Score=29.81 Aligned_cols=34 Identities=18% Similarity=0.414 Sum_probs=27.3
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCc
Q 022744 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (292)
Q Consensus 12 ~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~ 50 (292)
++.|++++ |.|++- ..+++.|.++|++|+++...
T Consensus 2 ~~~~vlI~---G~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVC---GHSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEE---CCSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEE---CCCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 45688888 446665 78999999999999999874
No 43
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=58.70 E-value=7.7 Score=30.20 Aligned_cols=49 Identities=14% Similarity=0.154 Sum_probs=32.4
Q ss_pred ccCCCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccc
Q 022744 9 ASCKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLH 57 (292)
Q Consensus 9 ~~~~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~ 57 (292)
+|.++.=|++=+.-..-.+--.+-|+..|.++||+||+..++...+.++
T Consensus 4 ~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLle 52 (157)
T 1kjn_A 4 ESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQ 52 (157)
T ss_dssp --CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred ccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhee
Confidence 3444432333333344556667889999999999999999998665554
No 44
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=58.23 E-value=19 Score=32.33 Aligned_cols=43 Identities=9% Similarity=0.020 Sum_probs=27.1
Q ss_pred cccCCCceEEEEeCCCccChHHHHHHHHHHhhC-CCEEEEEeCcc
Q 022744 8 AASCKRVHCLVLSYPAQGHINPLLQFAKRLEHK-GLKVTLVTTYF 51 (292)
Q Consensus 8 ~~~~~~~hvv~~p~p~~GH~~P~l~La~~La~r-G~~VT~itt~~ 51 (292)
+.+++.++|+++. .......=+..|.++|.++ |+++.++.|-.
T Consensus 20 ~~~~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~ 63 (396)
T 3dzc_A 20 FQSNAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQ 63 (396)
T ss_dssp ----CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCS
T ss_pred HHhCCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecc
Confidence 3344445666655 5555677778899999887 78887665543
No 45
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=57.82 E-value=75 Score=26.69 Aligned_cols=41 Identities=20% Similarity=0.288 Sum_probs=33.2
Q ss_pred CCceEEEEeC--CCccChHHHHHHHHHHhhCCCEEEEEeCccc
Q 022744 12 KRVHCLVLSY--PAQGHINPLLQFAKRLEHKGLKVTLVTTYFI 52 (292)
Q Consensus 12 ~~~hvv~~p~--p~~GH~~P~l~La~~La~rG~~VT~itt~~~ 52 (292)
++.++++|.. ++-|=..-...||..||++|.+|-+|-.+..
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3456666654 6889999999999999999999999877643
No 46
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=57.68 E-value=17 Score=30.78 Aligned_cols=40 Identities=10% Similarity=-0.093 Sum_probs=36.1
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCc
Q 022744 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (292)
Q Consensus 11 ~~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~ 50 (292)
.++.+|++.+.++-.|-....-++..|..+|++|.++...
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 3467899999999999999999999999999999987654
No 47
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=57.44 E-value=21 Score=28.39 Aligned_cols=41 Identities=15% Similarity=0.097 Sum_probs=32.6
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCccccc
Q 022744 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISK 54 (292)
Q Consensus 13 ~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~ 54 (292)
..||++.-..+.|=+ =..+|.++|.++|++|.++.|+....
T Consensus 5 ~k~IllgvTGs~aa~-k~~~ll~~L~~~g~~V~vv~T~~A~~ 45 (175)
T 3qjg_A 5 GENVLICLCGSVNSI-NISHYIIELKSKFDEVNVIASTNGRK 45 (175)
T ss_dssp CCEEEEEECSSGGGG-GHHHHHHHHTTTCSEEEEEECTGGGG
T ss_pred CCEEEEEEeCHHHHH-HHHHHHHHHHHCCCEEEEEECcCHHH
Confidence 357777766666555 48999999999999999999887543
No 48
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=57.33 E-value=16 Score=30.10 Aligned_cols=41 Identities=12% Similarity=0.001 Sum_probs=34.4
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCccccc
Q 022744 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISK 54 (292)
Q Consensus 13 ~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~ 54 (292)
+.||++--..+.|-+. ..+|.+.|.++|++|.++.|+....
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~ 44 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQL 44 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHH
Confidence 4678888888877776 8999999999999999999987544
No 49
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=57.29 E-value=16 Score=29.69 Aligned_cols=40 Identities=15% Similarity=-0.054 Sum_probs=36.0
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcc
Q 022744 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (292)
Q Consensus 12 ~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~ 51 (292)
++.+|++.+.++-.|-....-++..|..+|++|.++....
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~v 126 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDI 126 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSB
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 4568999999999999999999999999999999977643
No 50
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=56.79 E-value=81 Score=26.94 Aligned_cols=40 Identities=15% Similarity=0.182 Sum_probs=32.4
Q ss_pred CceEEEEeC--CCccChHHHHHHHHHHhhCCCEEEEEeCccc
Q 022744 13 RVHCLVLSY--PAQGHINPLLQFAKRLEHKGLKVTLVTTYFI 52 (292)
Q Consensus 13 ~~hvv~~p~--p~~GH~~P~l~La~~La~rG~~VT~itt~~~ 52 (292)
+.++++|.. ++-|=..-...||..|+++|.+|-+|-.+..
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~r 144 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLR 144 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 445666654 5789999999999999999999999876653
No 51
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=52.90 E-value=11 Score=33.88 Aligned_cols=36 Identities=19% Similarity=0.261 Sum_probs=26.1
Q ss_pred CceEEEEe---CCCccChHHHHHHHHHHhhCCCEEEEEeCc
Q 022744 13 RVHCLVLS---YPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (292)
Q Consensus 13 ~~hvv~~p---~p~~GH~~P~l~La~~La~rG~~VT~itt~ 50 (292)
+++|++++ +| .+.-.-...+++.|+++| +|++++..
T Consensus 14 ~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 14 RPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp CSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 57898887 55 333333456889999999 99999543
No 52
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=52.51 E-value=27 Score=28.70 Aligned_cols=43 Identities=14% Similarity=0.088 Sum_probs=35.1
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCccccccc
Q 022744 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSL 56 (292)
Q Consensus 12 ~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~ 56 (292)
++.||++.-..+.+-+. ..+|.++|.++| +|.++.|+....-+
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv 60 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL 60 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence 35689888888888776 899999999999 99999998755433
No 53
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=51.21 E-value=95 Score=25.03 Aligned_cols=98 Identities=16% Similarity=0.143 Sum_probs=61.2
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccc------cccccCCCCCCCCeeEEEccCCCCCCCCCCcc
Q 022744 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFIS------KSLHRDSSSPSTSISLEAISDGYDEGGSAQTE 85 (292)
Q Consensus 12 ~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~------~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~ 85 (292)
++--|+++.-++.|=..-.+.+|.+.+.+|.+|-|+..-... ..+.. . ++++.....++.. . ..
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~-----L-~v~~~~~g~gf~~---~-~~ 96 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEP-----H-GVEFQVMATGFTW---E-TQ 96 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGG-----G-TCEEEECCTTCCC---C-GG
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHh-----C-CcEEEEccccccc---C-CC
Confidence 456899999999999999999999999999999998543310 11111 1 4777776554432 1 11
Q ss_pred CHHHHHHHHHHhCcHHHHHHHHHhhcCCCCccEEEeCCCC
Q 022744 86 GVEAYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFL 125 (292)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~ 125 (292)
+...-. ......+....+.+. + ..+|+||.|-+.
T Consensus 97 ~~~~~~----~~a~~~l~~a~~~l~-~-~~yDlvILDEi~ 130 (196)
T 1g5t_A 97 NREADT----AACMAVWQHGKRMLA-D-PLLDMVVLDELT 130 (196)
T ss_dssp GHHHHH----HHHHHHHHHHHHHTT-C-TTCSEEEEETHH
T ss_pred CcHHHH----HHHHHHHHHHHHHHh-c-CCCCEEEEeCCC
Confidence 111111 111234555555443 2 468999999763
No 54
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=50.42 E-value=22 Score=29.00 Aligned_cols=41 Identities=22% Similarity=0.058 Sum_probs=32.2
Q ss_pred CCceEEEEeCCCccChH-HHHHHHHHHhhCCCEEEEEeCcccc
Q 022744 12 KRVHCLVLSYPAQGHIN-PLLQFAKRLEHKGLKVTLVTTYFIS 53 (292)
Q Consensus 12 ~~~hvv~~p~p~~GH~~-P~l~La~~La~rG~~VT~itt~~~~ 53 (292)
+..||++--..+ +... =..+|.++|.++|++|.++.|+...
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~ 47 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQ 47 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSC
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHH
Confidence 345777666555 5555 7899999999999999999988744
No 55
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=49.82 E-value=50 Score=30.95 Aligned_cols=98 Identities=14% Similarity=0.211 Sum_probs=57.1
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccC--CCCCCCCC-CccCH-H
Q 022744 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISD--GYDEGGSA-QTEGV-E 88 (292)
Q Consensus 13 ~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~--~~~~~~~~-~~~~~-~ 88 (292)
+++-++++. .+-.-++++|+.|.+.|++ ++.|....+.++. .+|....+.+ |+|+ -+. ..+.+ +
T Consensus 9 ~i~~aLISV---sDK~glvelAk~L~~lGfe--I~ATgGTak~L~e------~GI~v~~V~~vTgfPE-il~GRVKTLHP 76 (523)
T 3zzm_A 9 PIRRALISV---YDKTGLVDLAQGLSAAGVE--IISTGSTAKTIAD------TGIPVTPVEQLTGFPE-VLDGRVKTLHP 76 (523)
T ss_dssp CCCEEEEEE---SSCTTHHHHHHHHHHTTCE--EEECHHHHHHHHT------TTCCCEEHHHHHSCCC-CTTTTSSSCSH
T ss_pred cccEEEEEE---eccccHHHHHHHHHHCCCE--EEEcchHHHHHHH------cCCceeeccccCCCch-hhCCccccCCc
Confidence 445666666 4556688999999999987 5678776666653 3677766653 7776 332 22332 2
Q ss_pred HHHHHH-H-HhCcHHHHHHHHHhhcCCCCccEEEeCCCC
Q 022744 89 AYLERF-W-QIGPRSLCELVENMNGSGVPVDCIVYDSFL 125 (292)
Q Consensus 89 ~~~~~~-~-~~~~~~l~~~l~~l~~~~~~~d~iI~D~~~ 125 (292)
....-+ . +...+.++++ ++. .-.++|+||++.+-
T Consensus 77 ~ihgGiLa~r~~~~h~~~l-~~~--~i~~iDlVvvNLYP 112 (523)
T 3zzm_A 77 RVHAGLLADLRKSEHAAAL-EQL--GIEAFELVVVNLYP 112 (523)
T ss_dssp HHHHHHHCCTTSHHHHHHH-HHH--TCCCCSEEEEECCC
T ss_pred hhhhhhccCCCCHHHHHHH-HHC--CCCceeEEEEeCCC
Confidence 222222 1 1122333332 222 22589999999754
No 56
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=49.81 E-value=17 Score=27.04 Aligned_cols=39 Identities=15% Similarity=-0.004 Sum_probs=24.7
Q ss_pred HHHHHHHhhcCCCCccEEEeCCCCcc--HHHHHH---HhCCCcEEE
Q 022744 102 LCELVENMNGSGVPVDCIVYDSFLPW--ALDVAK---KFGLVGAAF 142 (292)
Q Consensus 102 l~~~l~~l~~~~~~~d~iI~D~~~~~--~~~vA~---~lgiP~v~f 142 (292)
-++.++.+.+ .+||+||.|..++- +.++++ +.++|.+.+
T Consensus 42 g~eAl~~~~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 42 MQEALDIARK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp HHHHHHHHHH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred HHHHHHHHHh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 3444554433 36799999999863 455555 447886654
No 57
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=48.33 E-value=1.1e+02 Score=25.98 Aligned_cols=31 Identities=23% Similarity=0.141 Sum_probs=23.9
Q ss_pred ccE-EEeCCCCc-cHHHHHHHhCCCcEEEeccc
Q 022744 116 VDC-IVYDSFLP-WALDVAKKFGLVGAAFLTQS 146 (292)
Q Consensus 116 ~d~-iI~D~~~~-~~~~vA~~lgiP~v~f~~~~ 146 (292)
||+ ||.|.--. -+..-|.++|||.|.+.-+.
T Consensus 159 Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 159 PDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp CSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred CCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 465 55688764 67888999999999976654
No 58
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=48.30 E-value=27 Score=29.11 Aligned_cols=41 Identities=20% Similarity=0.213 Sum_probs=36.6
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcc
Q 022744 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (292)
Q Consensus 11 ~~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~ 51 (292)
+.+..|++.--||.|=..-++.+|..|+++|++|.++..+.
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 44678999999999999999999999999999998887765
No 59
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=48.28 E-value=26 Score=28.74 Aligned_cols=40 Identities=8% Similarity=-0.061 Sum_probs=35.3
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCc
Q 022744 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (292)
Q Consensus 11 ~~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~ 50 (292)
.++.++++.+.++-.|-+...-++..|..+|++|.++...
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 3467999999999999999999999999999999998654
No 60
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=46.61 E-value=40 Score=30.19 Aligned_cols=114 Identities=10% Similarity=0.005 Sum_probs=55.2
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHhhC--CCEEEEEeCcccccccccCCCCCCCCeeE-EEccCCCCCCCCCCccCHH
Q 022744 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHK--GLKVTLVTTYFISKSLHRDSSSPSTSISL-EAISDGYDEGGSAQTEGVE 88 (292)
Q Consensus 12 ~~~hvv~~p~p~~GH~~P~l~La~~La~r--G~~VT~itt~~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~ 88 (292)
++++|+++.- ......=+-.|.++|.++ |+++.++.|....+...... ..-+++. ..+. +-. ...++.
T Consensus 26 ~~~kI~~v~G-tr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~--~~~~i~~~~~l~--v~~----~~~~~~ 96 (403)
T 3ot5_A 26 AKIKVMSIFG-TRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVL--EIFDIKPDIDLD--IMK----KGQTLA 96 (403)
T ss_dssp CCEEEEEEEC-SHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHH--HHTTCCCSEECC--CCC-----CCCHH
T ss_pred ccceEEEEEe-cChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHH--HhcCCCCCcccc--cCC----CCCCHH
Confidence 3457776654 444566668889999987 68877666543211100000 0001210 1111 100 111222
Q ss_pred HHHHHHHHhCcHHHHHHHHHhhcCCCCccEEEe--CCCCcc-HHHHHHHhCCCcEEEe
Q 022744 89 AYLERFWQIGPRSLCELVENMNGSGVPVDCIVY--DSFLPW-ALDVAKKFGLVGAAFL 143 (292)
Q Consensus 89 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~iI~--D~~~~~-~~~vA~~lgiP~v~f~ 143 (292)
..+ .+ +...+.+++++. +||+|++ |....| +..+|+++|||.+.+.
T Consensus 97 ~~~---~~-~~~~l~~~l~~~-----kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 97 EIT---SR-VMNGINEVIAAE-----NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp HHH---HH-HHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred HHH---HH-HHHHHHHHHHHc-----CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 211 11 112355556554 3588876 434445 3677889999987655
No 61
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=45.94 E-value=18 Score=34.04 Aligned_cols=52 Identities=27% Similarity=0.332 Sum_probs=32.8
Q ss_pred EEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccC--CCCC
Q 022744 16 CLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISD--GYDE 78 (292)
Q Consensus 16 vv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~--~~~~ 78 (292)
-++++. .+-.-++++|+.|.+.|++ +++|....+.++. .+|....+.+ |+|+
T Consensus 26 raLISV---~DK~glv~~Ak~L~~lGfe--I~ATgGTak~L~e------~GI~v~~V~kvTgfPE 79 (534)
T 4ehi_A 26 RALLSV---SDKEGIVEFGKELENLGFE--ILSTGGTFKLLKE------NGIKVIEVSDFTKSPE 79 (534)
T ss_dssp EEEEEE---SSCTTHHHHHHHHHHTTCE--EEECHHHHHHHHH------TTCCCEECBCCC----
T ss_pred EEEEEE---cccccHHHHHHHHHHCCCE--EEEccHHHHHHHH------CCCceeehhhccCCch
Confidence 344444 3455688999999999987 5677776666654 2666666653 6665
No 62
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=45.24 E-value=28 Score=28.30 Aligned_cols=39 Identities=15% Similarity=0.115 Sum_probs=30.9
Q ss_pred eEEEEeCCCccChHHHHHHHHHHhhC-CCEEEEEeCccccc
Q 022744 15 HCLVLSYPAQGHINPLLQFAKRLEHK-GLKVTLVTTYFISK 54 (292)
Q Consensus 15 hvv~~p~p~~GH~~P~l~La~~La~r-G~~VT~itt~~~~~ 54 (292)
+|++--..+.|-+. ..+|.+.|.++ |++|.++.|+....
T Consensus 2 ~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~ 41 (197)
T 1sbz_A 2 KLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKT 41 (197)
T ss_dssp EEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHH
T ss_pred EEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHH
Confidence 56666666666654 89999999999 99999999987543
No 63
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=45.15 E-value=26 Score=26.25 Aligned_cols=32 Identities=22% Similarity=0.274 Sum_probs=23.4
Q ss_pred CccEEEeCCCCc--cHHHHHHHh-------CCCcEEEeccc
Q 022744 115 PVDCIVYDSFLP--WALDVAKKF-------GLVGAAFLTQS 146 (292)
Q Consensus 115 ~~d~iI~D~~~~--~~~~vA~~l-------giP~v~f~~~~ 146 (292)
+||+||.|..++ -+.++++++ ++|.+.+.+.+
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 579999999997 357777654 47877765544
No 64
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=45.04 E-value=7.5 Score=34.87 Aligned_cols=23 Identities=9% Similarity=0.001 Sum_probs=18.4
Q ss_pred chhhhhhhccCCCCcEEEEEeCccc
Q 022744 267 NESCIKWLNDRANGLLFIYHLGVWQ 291 (292)
Q Consensus 267 ~~~cl~WLD~q~~~SVvYVsFGS~~ 291 (292)
+.++.+||+. .+.+|||+|||.+
T Consensus 210 ~~~l~~~l~~--~~~~Vlv~~Gs~~ 232 (404)
T 3h4t_A 210 SAELEGFLRA--GSPPVYVGFGSGP 232 (404)
T ss_dssp CHHHHHHHHT--SSCCEEECCTTSC
T ss_pred CHHHHHHHhc--CCCeEEEECCCCC
Confidence 3568889985 4579999999985
No 65
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=44.97 E-value=29 Score=25.23 Aligned_cols=33 Identities=21% Similarity=0.390 Sum_probs=24.8
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCc
Q 022744 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (292)
Q Consensus 13 ~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~ 50 (292)
.+|++++ |.|.+- ..+++.|+++|++|+++...
T Consensus 4 ~m~i~Ii---G~G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIA---GIGRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEE---CCSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE---CCCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 3578877 447664 46899999999999998754
No 66
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=44.45 E-value=24 Score=31.06 Aligned_cols=105 Identities=14% Similarity=0.066 Sum_probs=67.3
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHhhC--CCEEEEEeCcccccccccCCCCCCCCee-EEEccCCCCCCCCCCccCHH
Q 022744 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHK--GLKVTLVTTYFISKSLHRDSSSPSTSIS-LEAISDGYDEGGSAQTEGVE 88 (292)
Q Consensus 12 ~~~hvv~~p~p~~GH~~P~l~La~~La~r--G~~VT~itt~~~~~~~~~~~~~~~~~i~-~~~l~~~~~~~~~~~~~~~~ 88 (292)
...+|+++-..+.|.+.-.+.+.+.|.++ +.+||+++.+.+.+.++ ..+.|+ ++.++.. + ..
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~-----~~p~vd~vi~~~~~----~------~~ 71 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVME-----YNPNIDELIVVDKK----G------RH 71 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTS-----SCTTCSEEEEECCS----S------HH
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHh-----cCCCccEEEEeCcc----c------cc
Confidence 34689999999999999999999999986 89999999988776554 235675 4444310 0 00
Q ss_pred HHHHHHHHhCcHHHHHHHHHhhcCCCCc-cEEEeCCCCccHHHHHHHhCCCcEE
Q 022744 89 AYLERFWQIGPRSLCELVENMNGSGVPV-DCIVYDSFLPWALDVAKKFGLVGAA 141 (292)
Q Consensus 89 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~-d~iI~D~~~~~~~~vA~~lgiP~v~ 141 (292)
. .+. .+..+++++.+ .++ |++|.=....-...++.-.|+|..+
T Consensus 72 ~---~~~-----~~~~l~~~Lr~--~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 72 N---SIS-----GLNEVAREINA--KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp H---HHH-----HHHHHHHHHHH--HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred c---cHH-----HHHHHHHHHhh--CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0 000 12223333322 357 8887533233456677888888644
No 67
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=44.04 E-value=34 Score=27.34 Aligned_cols=41 Identities=10% Similarity=0.025 Sum_probs=31.7
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccc
Q 022744 14 VHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKS 55 (292)
Q Consensus 14 ~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~ 55 (292)
.||++.-..+.|=+ =..+|.++|.++|++|.++.|+....-
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~f 43 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNF 43 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGT
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHH
Confidence 46666666665555 678999999999999999999875543
No 68
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=42.61 E-value=23 Score=26.76 Aligned_cols=36 Identities=22% Similarity=0.204 Sum_probs=27.0
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCccc
Q 022744 14 VHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFI 52 (292)
Q Consensus 14 ~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~ 52 (292)
.+++++.- +.| +.|++.+++.|.++|.+|+++ ...+
T Consensus 19 ~~~llIaG-G~G-iaPl~sm~~~l~~~~~~v~l~-g~R~ 54 (142)
T 3lyu_A 19 GKILAIGA-YTG-IVEVYPIAKAWQEIGNDVTTL-HVTF 54 (142)
T ss_dssp SEEEEEEE-TTH-HHHHHHHHHHHHHTTCEEEEE-EEEE
T ss_pred CeEEEEEC-cCc-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 35555543 334 899999999999999999998 5443
No 69
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=40.50 E-value=54 Score=23.04 Aligned_cols=42 Identities=19% Similarity=0.237 Sum_probs=26.7
Q ss_pred HHHHHHhhcCCCCccEEEeCCCCc--cHHHHHHHh-------CCCcEEEeccc
Q 022744 103 CELVENMNGSGVPVDCIVYDSFLP--WALDVAKKF-------GLVGAAFLTQS 146 (292)
Q Consensus 103 ~~~l~~l~~~~~~~d~iI~D~~~~--~~~~vA~~l-------giP~v~f~~~~ 146 (292)
++.++.+.+ .++|+||.|..++ -+.++.+++ ++|.+++....
T Consensus 36 ~~al~~l~~--~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 36 QIALEKLSE--FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHHHHHTT--BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHHHHHh--cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 444554432 3579999999886 356666654 47777766544
No 70
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=39.99 E-value=35 Score=27.91 Aligned_cols=40 Identities=13% Similarity=0.066 Sum_probs=29.4
Q ss_pred CceEEEEeCCCccChHH-HHHHHHHHhhCCCEEEEEeCcccc
Q 022744 13 RVHCLVLSYPAQGHINP-LLQFAKRLEHKGLKVTLVTTYFIS 53 (292)
Q Consensus 13 ~~hvv~~p~p~~GH~~P-~l~La~~La~rG~~VT~itt~~~~ 53 (292)
..||++.-..+ +...- ..+|.++|.++|++|.++.|+...
T Consensus 5 ~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 5 GKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 34677666665 55555 789999999999999999988744
No 71
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=38.65 E-value=43 Score=24.31 Aligned_cols=44 Identities=14% Similarity=0.110 Sum_probs=34.0
Q ss_pred chhhhhcccCCCceEEEEeCCCccChHH-HHHHHHHHhhCCCEEEEEe
Q 022744 2 ENIEKKAASCKRVHCLVLSYPAQGHINP-LLQFAKRLEHKGLKVTLVT 48 (292)
Q Consensus 2 ~~~~~~~~~~~~~hvv~~p~p~~GH~~P-~l~La~~La~rG~~VT~it 48 (292)
||+++.. +..+|++++-.|.|+-.- ...|-+.+.++|.++.+-+
T Consensus 13 ~~~~~~~---~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 13 ENLYFQG---SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp CCCCCSC---SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred hhHhhcc---cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 6776655 456899999999999875 6777778888999876544
No 72
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=38.38 E-value=46 Score=27.11 Aligned_cols=44 Identities=25% Similarity=0.221 Sum_probs=32.4
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHhh-CCCEEEEEeCccccccc
Q 022744 12 KRVHCLVLSYPAQGHINPLLQFAKRLEH-KGLKVTLVTTYFISKSL 56 (292)
Q Consensus 12 ~~~hvv~~p~p~~GH~~P~l~La~~La~-rG~~VT~itt~~~~~~~ 56 (292)
++.||++.-..+.+ ..=..+|.++|.+ +|++|.++.|+....-+
T Consensus 18 ~~k~IllgvTGsia-a~k~~~lv~~L~~~~g~~V~vv~T~~A~~fi 62 (206)
T 1qzu_A 18 RKFHVLVGVTGSVA-ALKLPLLVSKLLDIPGLEVAVVTTERAKHFY 62 (206)
T ss_dssp SSEEEEEEECSSGG-GGTHHHHHHHHC---CEEEEEEECTGGGGSS
T ss_pred CCCEEEEEEeChHH-HHHHHHHHHHHhcccCCEEEEEECHhHHHHh
Confidence 35677777777766 4456999999999 89999999998855433
No 73
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=38.04 E-value=46 Score=29.70 Aligned_cols=109 Identities=13% Similarity=0.034 Sum_probs=56.4
Q ss_pred EEeCCCccChHHHHHHHHHHhhCCCEEEEEeCccccc-ccccCCCCCCCCeeEEEccC-CCCCCCCCCccCHHHHHHHHH
Q 022744 18 VLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISK-SLHRDSSSPSTSISLEAISD-GYDEGGSAQTEGVEAYLERFW 95 (292)
Q Consensus 18 ~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~-~~~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~~~~~~ 95 (292)
++-+.+.--++=|-.|.++|.++ ++..++.|.-..+ .+.... ..++.+ .-|+ .+.. .. .++...+..
T Consensus 13 ~~v~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~---~~~~~i-~~~~~~l~~---~~-~~~~~~~~~-- 81 (385)
T 4hwg_A 13 MTIVGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVF---FDDMGI-RKPDYFLEV---AA-DNTAKSIGL-- 81 (385)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHH---HC-CCC-CCCSEECCC---CC-CCSHHHHHH--
T ss_pred eEEEEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHH---HhhCCC-CCCceecCC---CC-CCHHHHHHH--
Confidence 34455666677788888888877 8888776653322 121100 001111 0111 0111 11 122222211
Q ss_pred HhCcHHHHHHHHHhhcCCCCccEEEe--CCCCccHHHHHHHhCCCcEEEec
Q 022744 96 QIGPRSLCELVENMNGSGVPVDCIVY--DSFLPWALDVAKKFGLVGAAFLT 144 (292)
Q Consensus 96 ~~~~~~l~~~l~~l~~~~~~~d~iI~--D~~~~~~~~vA~~lgiP~v~f~~ 144 (292)
+...+++.+++. +||+||. |....|+...|.++|||.+.+..
T Consensus 82 --~~~~l~~~l~~~-----kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ea 125 (385)
T 4hwg_A 82 --VIEKVDEVLEKE-----KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEA 125 (385)
T ss_dssp --HHHHHHHHHHHH-----CCSEEEEESCSGGGGGHHHHHHTTCCEEEESC
T ss_pred --HHHHHHHHHHhc-----CCcEEEEECCchHHHHHHHHHHhCCCEEEEeC
Confidence 123456666654 3588776 55556777788899999776643
No 74
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=37.37 E-value=35 Score=27.57 Aligned_cols=41 Identities=7% Similarity=-0.006 Sum_probs=31.9
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCccccc
Q 022744 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISK 54 (292)
Q Consensus 13 ~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~ 54 (292)
..||++.-..+.|=+. ..+|.+.|.++|++|.++.|+....
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~ 48 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAED 48 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHH
Confidence 3477777666666554 7899999999999999999986543
No 75
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=37.16 E-value=18 Score=28.74 Aligned_cols=18 Identities=33% Similarity=0.396 Sum_probs=16.1
Q ss_pred HHHHHHHhhCCCEEEEEe
Q 022744 31 LQFAKRLEHKGLKVTLVT 48 (292)
Q Consensus 31 l~La~~La~rG~~VT~it 48 (292)
+-+|..|+++|++||++=
T Consensus 15 L~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCCEEEEE
Confidence 678999999999999974
No 76
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=36.73 E-value=55 Score=24.36 Aligned_cols=31 Identities=6% Similarity=-0.097 Sum_probs=24.9
Q ss_pred CccChHHHHHHHHHHhhCCCEEEEEeCcccc
Q 022744 23 AQGHINPLLQFAKRLEHKGLKVTLVTTYFIS 53 (292)
Q Consensus 23 ~~GH~~P~l~La~~La~rG~~VT~itt~~~~ 53 (292)
.......-+.||...++.|++|+++-+..-.
T Consensus 28 ~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV 58 (134)
T 3mc3_A 28 DLDRTYAPLFMASISASMEYETSVFFMIXGP 58 (134)
T ss_dssp GTHHHHHHHHHHHHHHHTTCEEEEEECTTGG
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEEeCcH
Confidence 4567788889999999999999987766533
No 77
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=35.85 E-value=50 Score=27.08 Aligned_cols=46 Identities=9% Similarity=0.051 Sum_probs=32.3
Q ss_pred HHHHHHHHHhhcCC--CCccEEEeCCCCccHHHHHHHhCCCcEEEecc
Q 022744 100 RSLCELVENMNGSG--VPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQ 145 (292)
Q Consensus 100 ~~l~~~l~~l~~~~--~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~~ 145 (292)
..|++++++..... ..+.+||+|---..+...|+++|||.+.+...
T Consensus 14 snl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~ 61 (211)
T 3p9x_A 14 TNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPK 61 (211)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCGG
T ss_pred hHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeChh
Confidence 35677776653321 24689999865556788999999999887654
No 78
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=35.36 E-value=60 Score=26.02 Aligned_cols=42 Identities=21% Similarity=0.126 Sum_probs=33.8
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCccccccc
Q 022744 14 VHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSL 56 (292)
Q Consensus 14 ~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~ 56 (292)
.||++.-..+.|-+ =..+|.++|.++|++|.++.|+....-+
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i 43 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVL 43 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHh
Confidence 37888888888855 5799999999999999999998754433
No 79
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=35.24 E-value=34 Score=29.54 Aligned_cols=38 Identities=8% Similarity=0.132 Sum_probs=29.1
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHhhC-C-CEEEEEeCcc
Q 022744 13 RVHCLVLSYPAQGHINPLLQFAKRLEHK-G-LKVTLVTTYF 51 (292)
Q Consensus 13 ~~hvv~~p~p~~GH~~P~l~La~~La~r-G-~~VT~itt~~ 51 (292)
+++|+++. ...++......+++.|+++ | ++|+++++..
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~ 47 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQ 47 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCS
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCC
Confidence 46888886 3467788888999999987 5 8887776654
No 80
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=34.15 E-value=25 Score=29.70 Aligned_cols=27 Identities=30% Similarity=0.438 Sum_probs=21.0
Q ss_pred CCccChHHHHHHHHHHhhCCCEEEEEeCc
Q 022744 22 PAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (292)
Q Consensus 22 p~~GH~~P~l~La~~La~rG~~VT~itt~ 50 (292)
.+.|.+- .+|+++|.++||+|+.++-.
T Consensus 7 GatGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 7 GGTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 4556554 57899999999999998743
No 81
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=34.01 E-value=46 Score=28.44 Aligned_cols=44 Identities=14% Similarity=0.173 Sum_probs=38.3
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHhhC--CCEEEEEeCcccccccc
Q 022744 14 VHCLVLSYPAQGHINPLLQFAKRLEHK--GLKVTLVTTYFISKSLH 57 (292)
Q Consensus 14 ~hvv~~p~p~~GH~~P~l~La~~La~r--G~~VT~itt~~~~~~~~ 57 (292)
++|+++-..+.|.+.-.+.+.+.|.++ +.+||+++.+.+.+.+.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~ 46 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPS 46 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHh
Confidence 378999999999999999999999986 89999999988765544
No 82
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=33.81 E-value=73 Score=26.00 Aligned_cols=45 Identities=16% Similarity=0.218 Sum_probs=31.0
Q ss_pred HHHHHHHHHhhcCC--CCccEEEeCCCCccHHHHHHHhCCCcEEEec
Q 022744 100 RSLCELVENMNGSG--VPVDCIVYDSFLPWALDVAKKFGLVGAAFLT 144 (292)
Q Consensus 100 ~~l~~~l~~l~~~~--~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~ 144 (292)
..++++++++.+.. ..+.+||+|---.-+...|+++|||.+.+..
T Consensus 19 snl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~ 65 (209)
T 4ds3_A 19 SNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKR 65 (209)
T ss_dssp HHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCc
Confidence 35666676664321 1367899985444567899999999998754
No 83
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=32.38 E-value=32 Score=29.67 Aligned_cols=43 Identities=16% Similarity=0.154 Sum_probs=29.3
Q ss_pred chhhhhcccCCCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeC
Q 022744 2 ENIEKKAASCKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTT 49 (292)
Q Consensus 2 ~~~~~~~~~~~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt 49 (292)
+|+.+.+ ..+..+|+++ .+.|.+- .+|+++|.++|++|+.+.-
T Consensus 15 ~~~~~~~-~~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r 57 (351)
T 3ruf_A 15 EEITQQL-IFSPKTWLIT--GVAGFIG--SNLLEKLLKLNQVVIGLDN 57 (351)
T ss_dssp HHHHHHH-HHSCCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred hhHHhhC-CCCCCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeC
Confidence 4555555 3334555554 4556554 6899999999999998764
No 84
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=31.99 E-value=33 Score=28.62 Aligned_cols=26 Identities=31% Similarity=0.418 Sum_probs=20.7
Q ss_pred ccChHHHHHHHHHHhhCCCEEEEEeCcc
Q 022744 24 QGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (292)
Q Consensus 24 ~GH~~P~l~La~~La~rG~~VT~itt~~ 51 (292)
.|.+- ..+|++|+++|++||+++.+.
T Consensus 28 SG~mG--~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHLG--KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 55443 568999999999999998765
No 85
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=31.67 E-value=39 Score=32.13 Aligned_cols=86 Identities=19% Similarity=0.265 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhhCCCEEEEEeCcccccccccCCCCCCCCeeEEEccC--CCCCCCCC-CccCH-HHHHHH-HHHhCcHHH
Q 022744 28 NPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISD--GYDEGGSA-QTEGV-EAYLER-FWQIGPRSL 102 (292)
Q Consensus 28 ~P~l~La~~La~rG~~VT~itt~~~~~~~~~~~~~~~~~i~~~~l~~--~~~~~~~~-~~~~~-~~~~~~-~~~~~~~~l 102 (292)
.=+++||+.|.+.|++ ++.|....+.++. .+|....+.+ |+|+ -+. ..+.+ +....- +.+...+.+
T Consensus 16 ~~iv~lAk~L~~lGf~--I~ATgGTAk~L~e------~GI~v~~V~k~TgfPE-~l~GRVKTLHP~ihgGiLar~~~~h~ 86 (593)
T 1g8m_A 16 AGLVEFARSLNALGLG--LIASGGTATALRD------AGLPVRDVSDLTGFPE-MLGGRVKTLHPAVHAGILARNIPEDN 86 (593)
T ss_dssp TTHHHHHHHHHHTTCE--EEECHHHHHHHHH------TTCCCEEHHHHHSCCC-BGGGTBSSCSHHHHHHHHCCSSHHHH
T ss_pred HhHHHHHHHHHHCCCE--EEEchHHHHHHHH------CCCeEEEeecccCCch-hhcCCccccCchhhhhhccCCCHHHH
Confidence 3478899999999987 6688877666654 2676666653 7776 332 22332 222211 112222333
Q ss_pred HHHHHHhhcCCCCccEEEeCCCC
Q 022744 103 CELVENMNGSGVPVDCIVYDSFL 125 (292)
Q Consensus 103 ~~~l~~l~~~~~~~d~iI~D~~~ 125 (292)
+++-+ . .-.++|+||+..+-
T Consensus 87 ~~l~~-~--~I~~iDlVvvNLYP 106 (593)
T 1g8m_A 87 ADMNK-Q--DFSLVRVVVCNLYP 106 (593)
T ss_dssp HHHHH-T--TCCCEEEEEEECCC
T ss_pred HHHHH-c--CCCceeEEEEeccC
Confidence 33322 1 22579999998643
No 86
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=30.96 E-value=36 Score=26.15 Aligned_cols=37 Identities=22% Similarity=0.223 Sum_probs=27.9
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccc
Q 022744 14 VHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFIS 53 (292)
Q Consensus 14 ~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~ 53 (292)
.+++++. .+.| +.|++.+++.|.++|.+|+++ ...+.
T Consensus 24 ~~~llIa-GG~G-ItPl~sm~~~l~~~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 24 GKILAIG-AYTG-IVEVYPIAKAWQEIGNDVTTL-HVTFE 60 (158)
T ss_dssp SEEEEEE-ETTH-HHHHHHHHHHHHHHTCEEEEE-EECBG
T ss_pred CeEEEEE-ccCc-HHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 3565554 3445 899999999999999999998 65443
No 87
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=30.69 E-value=52 Score=28.55 Aligned_cols=33 Identities=12% Similarity=0.091 Sum_probs=26.4
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeC
Q 022744 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTT 49 (292)
Q Consensus 13 ~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt 49 (292)
..||.++=..+.| |-.+|+.|+++|++|+..=.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 4578888777777 55799999999999998644
No 88
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=30.60 E-value=2.8e+02 Score=24.45 Aligned_cols=35 Identities=20% Similarity=0.257 Sum_probs=22.1
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcc
Q 022744 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (292)
Q Consensus 12 ~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~ 51 (292)
++.||+++.- ++ |... +.+...+.|++|+++....
T Consensus 4 ~~k~l~Il~~-~~-~~~~---i~~aa~~lG~~vv~v~~~~ 38 (425)
T 3vot_A 4 RNKNLAIICQ-NK-HLPF---IFEEAERLGLKVTFFYNSA 38 (425)
T ss_dssp CCCEEEEECC-CT-TCCH---HHHHHHHTTCEEEEEEETT
T ss_pred CCcEEEEECC-Ch-hHHH---HHHHHHHCCCEEEEEECCC
Confidence 4567777743 33 2222 3566677899999987654
No 89
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=30.54 E-value=72 Score=24.59 Aligned_cols=51 Identities=16% Similarity=0.283 Sum_probs=36.6
Q ss_pred CchhhhhcccCCCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcc
Q 022744 1 MENIEKKAASCKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (292)
Q Consensus 1 ~~~~~~~~~~~~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~ 51 (292)
|.-+|......+..-|++.=.+|.|=..-...|++.|..+|..|.++....
T Consensus 1 ~~~~~~~~~~~~~~~i~l~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~~d~ 51 (186)
T 2yvu_A 1 MQALTTYKCIEKGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLDGDW 51 (186)
T ss_dssp -------CCCSCCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHHH
T ss_pred CcccccccccCCCcEEEEEcCCCCCHHHHHHHHHHHHHhcCCeEEEeeHHH
Confidence 556777665556677888889999999999999999999999988875543
No 90
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=29.29 E-value=87 Score=22.38 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=21.4
Q ss_pred CccEEEeCCCCcc--HHHHHHHh-------CCCcEEEeccc
Q 022744 115 PVDCIVYDSFLPW--ALDVAKKF-------GLVGAAFLTQS 146 (292)
Q Consensus 115 ~~d~iI~D~~~~~--~~~vA~~l-------giP~v~f~~~~ 146 (292)
++|+||.|..++- +.++.+++ ++|.+++....
T Consensus 48 ~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 48 LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 5699999998863 45555433 47777766544
No 91
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=28.92 E-value=53 Score=28.79 Aligned_cols=36 Identities=8% Similarity=0.106 Sum_probs=26.7
Q ss_pred eEEEEe--CC-CccChHHHHHHHHHHhhCCCEEEEEeCcc
Q 022744 15 HCLVLS--YP-AQGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (292)
Q Consensus 15 hvv~~p--~p-~~GH~~P~l~La~~La~rG~~VT~itt~~ 51 (292)
+|+++. +| .-|.-.-...|++.|+++ |+|++++...
T Consensus 2 kI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~ 40 (413)
T 3oy2_A 2 KLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHA 40 (413)
T ss_dssp EEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESC
T ss_pred eEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecC
Confidence 566653 23 235667788999999999 9999988654
No 92
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=28.34 E-value=35 Score=31.68 Aligned_cols=35 Identities=17% Similarity=0.362 Sum_probs=26.6
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCc
Q 022744 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (292)
Q Consensus 11 ~~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~ 50 (292)
..++|||++=-..-| +.+|++|+++|++||+|...
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCC
Confidence 346799988543333 57899999999999999764
No 93
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=27.89 E-value=54 Score=26.32 Aligned_cols=42 Identities=19% Similarity=0.270 Sum_probs=32.4
Q ss_pred HHHHHHHHHhhcCCCCccEEEeCCCCccHHHHHHHhCCCcEEEeccc
Q 022744 100 RSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQS 146 (292)
Q Consensus 100 ~~l~~~l~~l~~~~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~~~ 146 (292)
+..++.++++.++ .+++||-|.. +...|+++|+|.+.+.++-
T Consensus 129 ~e~~~~i~~l~~~--G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 129 DEITTLISKVKTE--NIKIVVSGKT---VTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp GGHHHHHHHHHHT--TCCEEEECHH---HHHHHHHTTCEEEECCCCH
T ss_pred HHHHHHHHHHHHC--CCeEEECCHH---HHHHHHHcCCcEEEEecCH
Confidence 4566777777553 5799999864 6899999999999877644
No 94
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=27.48 E-value=62 Score=27.95 Aligned_cols=34 Identities=9% Similarity=0.110 Sum_probs=25.4
Q ss_pred eEEEEeCCCccChHHHHHHHHHHhhCCC-EEEEEeC
Q 022744 15 HCLVLSYPAQGHINPLLQFAKRLEHKGL-KVTLVTT 49 (292)
Q Consensus 15 hvv~~p~p~~GH~~P~l~La~~La~rG~-~VT~itt 49 (292)
+|+++.. ..++...+..|+++|.++|+ ++.++.+
T Consensus 2 kIl~v~~-~~~~~~~~~~l~~~L~~~g~~~~~v~~~ 36 (384)
T 1vgv_A 2 KVLTVFG-TRPEAIKMAPLVHALAKDPFFEAKVCVT 36 (384)
T ss_dssp EEEEEEC-SHHHHHHHHHHHHHHHHSTTCEEEEEEC
T ss_pred eEEEEec-ccHHHHHHHHHHHHHHhCCCCceEEEEc
Confidence 5666643 35677888999999999994 8876544
No 95
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=27.26 E-value=74 Score=30.33 Aligned_cols=40 Identities=5% Similarity=-0.059 Sum_probs=36.1
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcc
Q 022744 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (292)
Q Consensus 12 ~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~ 51 (292)
.+.+||+.+.++-.|-+...-++..|..+|++|..+...-
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~v 136 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMV 136 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSB
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCC
Confidence 4678999999999999999999999999999999876543
No 96
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=27.24 E-value=69 Score=26.27 Aligned_cols=44 Identities=7% Similarity=0.180 Sum_probs=29.9
Q ss_pred HHHHHHHHhhcC-CCCccEEEeCCCCccHHHHHHHhCCCcEEEec
Q 022744 101 SLCELVENMNGS-GVPVDCIVYDSFLPWALDVAKKFGLVGAAFLT 144 (292)
Q Consensus 101 ~l~~~l~~l~~~-~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~ 144 (292)
.++++++++.+. +..+.+||+|---..+...|+++|||.+.+..
T Consensus 18 nl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~ 62 (215)
T 3tqr_A 18 NLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIPH 62 (215)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 456666655332 12367899986544567899999999998754
No 97
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=27.21 E-value=73 Score=25.92 Aligned_cols=44 Identities=16% Similarity=0.247 Sum_probs=30.7
Q ss_pred HHHHHHHHhhcC--CCCccEEEeCCCCccHHHHHHHhCCCcEEEec
Q 022744 101 SLCELVENMNGS--GVPVDCIVYDSFLPWALDVAKKFGLVGAAFLT 144 (292)
Q Consensus 101 ~l~~~l~~l~~~--~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~ 144 (292)
.|+.+++++.+. +..+.+||++.--..+...|+++|||.+.+.+
T Consensus 13 ~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~ 58 (209)
T 1meo_A 13 NLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINH 58 (209)
T ss_dssp THHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECc
Confidence 356666654332 12467899987666678889999999987655
No 98
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=26.44 E-value=79 Score=23.67 Aligned_cols=36 Identities=17% Similarity=0.153 Sum_probs=26.4
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcc
Q 022744 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (292)
Q Consensus 11 ~~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~ 51 (292)
....+|+++= .|.+- ..+++.|.++|++|+++....
T Consensus 17 ~~~~~v~IiG---~G~iG--~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 17 QKSKYIVIFG---CGRLG--SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCCEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEESCG
T ss_pred cCCCcEEEEC---CCHHH--HHHHHHHHhCCCeEEEEECCH
Confidence 3456888883 46554 557899999999999987543
No 99
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=26.23 E-value=1e+02 Score=25.25 Aligned_cols=45 Identities=16% Similarity=0.298 Sum_probs=30.4
Q ss_pred HHHHHHHHHhhcCC--CCccEEEeCCCCccHHHHHHHhCCCcEEEec
Q 022744 100 RSLCELVENMNGSG--VPVDCIVYDSFLPWALDVAKKFGLVGAAFLT 144 (292)
Q Consensus 100 ~~l~~~l~~l~~~~--~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~ 144 (292)
..++++++++.+.. ..+.+||+|---.-+...|+++|||.+.+..
T Consensus 20 snl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~ 66 (215)
T 3kcq_A 20 SNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKR 66 (215)
T ss_dssp HHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCB
T ss_pred HHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 34666676664321 1367899985444467899999999998654
No 100
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=26.10 E-value=39 Score=29.55 Aligned_cols=23 Identities=13% Similarity=-0.074 Sum_probs=19.2
Q ss_pred HHHHHHHHhhCCCEEEEEeCccc
Q 022744 30 LLQFAKRLEHKGLKVTLVTTYFI 52 (292)
Q Consensus 30 ~l~La~~La~rG~~VT~itt~~~ 52 (292)
-..+|+.++.+|++||+++.+..
T Consensus 68 G~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 68 GATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHCCCEEEEEecCCC
Confidence 35689999999999999987653
No 101
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=25.96 E-value=75 Score=25.87 Aligned_cols=45 Identities=13% Similarity=0.122 Sum_probs=29.6
Q ss_pred HHHHHHHHhhcC--CCCccEEEeCCCCccHHHHHHHhCCCcEEEecc
Q 022744 101 SLCELVENMNGS--GVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQ 145 (292)
Q Consensus 101 ~l~~~l~~l~~~--~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~~ 145 (292)
.+..+++++.+. +..+.+||++.--..+...|+++|||.+.+...
T Consensus 16 ~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~ 62 (212)
T 3av3_A 16 NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPK 62 (212)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcc
Confidence 345555555433 123567998854445778899999999876553
No 102
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A*
Probab=25.67 E-value=59 Score=31.74 Aligned_cols=46 Identities=17% Similarity=0.155 Sum_probs=34.0
Q ss_pred hcccCCCceEEEEeCCCc---cChHHHHH-HHHHHhh-CCCEEEEEeCccc
Q 022744 7 KAASCKRVHCLVLSYPAQ---GHINPLLQ-FAKRLEH-KGLKVTLVTTYFI 52 (292)
Q Consensus 7 ~~~~~~~~hvv~~p~p~~---GH~~P~l~-La~~La~-rG~~VT~itt~~~ 52 (292)
...+....|++..|..+. ||..|++. |.+.+.. -||+|+|+.++..
T Consensus 376 ~~~~~~~l~~~~~ps~g~lHLGh~v~~~k~l~~~~~~~~g~~v~ilIaD~~ 426 (690)
T 3p0j_A 376 PAAPAKPHACMWMPALLKVPLDVAEGMIKVTKDFIAAHPEGTVTLVLPDWS 426 (690)
T ss_dssp CCCCSSCEEEEECCCCSSCBHHHHHHHHHHHHHHHHHCSSCEEEEEECTTH
T ss_pred CCCCCCcceEEecCCCCCcccchHHHHHHHHHHHHHHcCCCeEEEEEecch
Confidence 334555678999996665 89999988 7665544 4899999888753
No 103
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=25.59 E-value=84 Score=22.77 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=21.5
Q ss_pred CccEEEeCCCCcc--HHHHHHHh---------CCCcEEEeccc
Q 022744 115 PVDCIVYDSFLPW--ALDVAKKF---------GLVGAAFLTQS 146 (292)
Q Consensus 115 ~~d~iI~D~~~~~--~~~vA~~l---------giP~v~f~~~~ 146 (292)
++|+||.|..++- +.++.+++ .+|.+++....
T Consensus 58 ~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 58 DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 5799999998863 45665544 26777765543
No 104
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=24.54 E-value=94 Score=24.53 Aligned_cols=46 Identities=13% Similarity=0.101 Sum_probs=27.3
Q ss_pred hhhhcccCCCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCc
Q 022744 4 IEKKAASCKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (292)
Q Consensus 4 ~~~~~~~~~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~ 50 (292)
+++.....+++-||+++-.+ |...-+..++..|+++|++|..+--.
T Consensus 3 ~~~~~~~~~~~~vvllHG~~-~~~~~~~~~~~~l~~~g~~v~~~D~~ 48 (267)
T 3sty_A 3 MEKSMSPFVKKHFVLVHAAF-HGAWCWYKIVALMRSSGHNVTALDLG 48 (267)
T ss_dssp -------CCCCEEEEECCTT-CCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CCCCCCCCCCCeEEEECCCC-CCcchHHHHHHHHHhcCCeEEEeccc
Confidence 34444344456677776554 55555678999999999987665433
No 105
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=24.39 E-value=68 Score=27.79 Aligned_cols=45 Identities=22% Similarity=0.254 Sum_probs=25.5
Q ss_pred chhhhhcccCCCceEEEEeCCCccChHHHHHHHHHHhhC-CCEEEEEeCc
Q 022744 2 ENIEKKAASCKRVHCLVLSYPAQGHINPLLQFAKRLEHK-GLKVTLVTTY 50 (292)
Q Consensus 2 ~~~~~~~~~~~~~hvv~~p~p~~GH~~P~l~La~~La~r-G~~VT~itt~ 50 (292)
+|.++.+.+++..+|+++ .+.|.+- ..|+++|.++ |++|+.+.-.
T Consensus 13 ~~~~~~~~~m~~~~vlVt--GatG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 13 EAQTQGPGSMKAKKVLIL--GVNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp ----------CCCEEEEE--SCSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred hhhhcCCcccCCCEEEEE--CCCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 455667766666676654 4556554 5789999998 9999988643
No 106
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=24.20 E-value=98 Score=25.20 Aligned_cols=45 Identities=13% Similarity=0.311 Sum_probs=30.1
Q ss_pred HHHHHHHHhhcCCC--CccEEEeCCCCccHHHHHHHhCCCcEEEecc
Q 022744 101 SLCELVENMNGSGV--PVDCIVYDSFLPWALDVAKKFGLVGAAFLTQ 145 (292)
Q Consensus 101 ~l~~~l~~l~~~~~--~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~~ 145 (292)
.+..+++++.+..- .+.+||++.--..+...|+++|||.+.+...
T Consensus 14 ~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~ 60 (216)
T 2ywr_A 14 NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRK 60 (216)
T ss_dssp HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGG
T ss_pred HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcc
Confidence 34555665544322 3568898864455778899999999876553
No 107
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=23.80 E-value=1.3e+02 Score=20.81 Aligned_cols=42 Identities=21% Similarity=0.356 Sum_probs=25.2
Q ss_pred HHHHHHhhcCCCCccEEEeCCCCcc--HHHHHHH----hCCCcEEEeccc
Q 022744 103 CELVENMNGSGVPVDCIVYDSFLPW--ALDVAKK----FGLVGAAFLTQS 146 (292)
Q Consensus 103 ~~~l~~l~~~~~~~d~iI~D~~~~~--~~~vA~~----lgiP~v~f~~~~ 146 (292)
++.++.+.+ .++|+||.|..++- +.++.++ .++|.+++....
T Consensus 36 ~~al~~~~~--~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 36 NEAVEMVEE--LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp HHHHHHHHT--TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred HHHHHHHhh--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 344444432 35799999998863 3444443 367877665544
No 108
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=23.63 E-value=1.5e+02 Score=25.17 Aligned_cols=53 Identities=8% Similarity=0.022 Sum_probs=36.4
Q ss_pred HHHHHHHHHhhcCCCCccEEEeCCCCc--cHHHHHHHhCCCcEEEeccchHHHHHHH
Q 022744 100 RSLCELVENMNGSGVPVDCIVYDSFLP--WALDVAKKFGLVGAAFLTQSCVVDCIYY 154 (292)
Q Consensus 100 ~~l~~~l~~l~~~~~~~d~iI~D~~~~--~~~~vA~~lgiP~v~f~~~~a~~~~~~~ 154 (292)
..+.++++.+.+ ..+.||+++.... .+..+|++.|++.+.+-+.+...+.++.
T Consensus 224 ~~l~~l~~~ik~--~~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l~~~Y~~~m~ 278 (291)
T 1pq4_A 224 QELKQLIDTAKE--NNLTMVFGETQFSTKSSEAIAAEIGAGVELLDPLAADWSSNLK 278 (291)
T ss_dssp HHHHHHHHHHHT--TTCCEEEEETTSCCHHHHHHHHHHTCEEEEECTTCSSHHHHHH
T ss_pred HHHHHHHHHHHH--cCCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCchhhHHHHHH
Confidence 345555555543 3578999987775 4678999999999888776654444443
No 109
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=23.47 E-value=1.1e+02 Score=26.01 Aligned_cols=48 Identities=15% Similarity=0.034 Sum_probs=31.8
Q ss_pred cccCCCceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeCcccccccc
Q 022744 8 AASCKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLH 57 (292)
Q Consensus 8 ~~~~~~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~~~~~~ 57 (292)
+...+++||++..==+. |--=+..|++.|.+ +++|+++.+..+++...
T Consensus 6 ~~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g 53 (261)
T 3ty2_A 6 KTATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGAS 53 (261)
T ss_dssp -----CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCT
T ss_pred hccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCcc
Confidence 33455689988875554 34447778888877 88999999888766443
No 110
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=23.41 E-value=1.1e+02 Score=26.74 Aligned_cols=49 Identities=24% Similarity=0.211 Sum_probs=35.9
Q ss_pred hhhhcccCCCceEEEE-eCCCccChHHHHHHHHHHhhCCCEEEEEeCccc
Q 022744 4 IEKKAASCKRVHCLVL-SYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFI 52 (292)
Q Consensus 4 ~~~~~~~~~~~hvv~~-p~p~~GH~~P~l~La~~La~rG~~VT~itt~~~ 52 (292)
++......+...|+++ .-+|-|=..-...||..||++|.+|-++.++..
T Consensus 16 ~~~~~~~~~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 16 TEKKLEKKDGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp HHHHHHSSCSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred HHHhhcccCCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3333333333444444 346889999999999999999999999998873
No 111
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=22.91 E-value=71 Score=26.35 Aligned_cols=41 Identities=12% Similarity=0.270 Sum_probs=31.7
Q ss_pred cHHHHHHHHHhhcCCCCccEEEeCCCCccHHHHHHHhCCCcEEEec
Q 022744 99 PRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLT 144 (292)
Q Consensus 99 ~~~l~~~l~~l~~~~~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~ 144 (292)
.+..++.++++.++ .+++||-|.. +...|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~~--G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKAN--GTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHHT--TCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHHC--CCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 34566777777553 5799998764 68999999999998874
No 112
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=22.84 E-value=1.6e+02 Score=20.44 Aligned_cols=32 Identities=19% Similarity=0.242 Sum_probs=21.3
Q ss_pred CccEEEeCCCCc--cHHHHHHHh-------CCCcEEEeccc
Q 022744 115 PVDCIVYDSFLP--WALDVAKKF-------GLVGAAFLTQS 146 (292)
Q Consensus 115 ~~d~iI~D~~~~--~~~~vA~~l-------giP~v~f~~~~ 146 (292)
++|+||.|..++ -+.++++++ ++|.+++....
T Consensus 51 ~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (129)
T 3h1g_A 51 DTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEG 91 (129)
T ss_dssp TCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCC
Confidence 579999999886 345555543 46777665544
No 113
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=22.73 E-value=1e+02 Score=25.12 Aligned_cols=44 Identities=11% Similarity=0.260 Sum_probs=30.7
Q ss_pred HHHHHHHHhhcCC--CCccEEEeCCCCccHHHHHHHhCCCcEEEec
Q 022744 101 SLCELVENMNGSG--VPVDCIVYDSFLPWALDVAKKFGLVGAAFLT 144 (292)
Q Consensus 101 ~l~~~l~~l~~~~--~~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~ 144 (292)
.++.+++++.+.. ..+.+||++.--..+...|+++|||.+.+..
T Consensus 13 nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~ 58 (212)
T 1jkx_A 13 NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIA 58 (212)
T ss_dssp HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCG
T ss_pred HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCc
Confidence 4666666654321 2367899986555678899999999988654
No 114
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=22.56 E-value=62 Score=26.77 Aligned_cols=22 Identities=27% Similarity=0.286 Sum_probs=18.0
Q ss_pred HHHHHHHHhhCCCEEEEEeCcc
Q 022744 30 LLQFAKRLEHKGLKVTLVTTYF 51 (292)
Q Consensus 30 ~l~La~~La~rG~~VT~itt~~ 51 (292)
-..+|++|+++|++|+++..+.
T Consensus 37 G~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 37 GFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHCCCEEEEEECCc
Confidence 3578999999999999986543
No 115
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=22.50 E-value=83 Score=26.00 Aligned_cols=31 Identities=16% Similarity=0.231 Sum_probs=23.3
Q ss_pred CccEEEeCCCCccHHHHHHHhCCCcEEEecc
Q 022744 115 PVDCIVYDSFLPWALDVAKKFGLVGAAFLTQ 145 (292)
Q Consensus 115 ~~d~iI~D~~~~~~~~vA~~lgiP~v~f~~~ 145 (292)
.+.+||++.--..+...|+++|||.+.+...
T Consensus 51 ~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~ 81 (229)
T 3auf_A 51 RVAVVISDRADAYGLERARRAGVDALHMDPA 81 (229)
T ss_dssp EEEEEEESSTTCHHHHHHHHTTCEEEECCGG
T ss_pred eEEEEEcCCCchHHHHHHHHcCCCEEEECcc
Confidence 3568998854445678999999999876553
No 116
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=22.12 E-value=30 Score=30.51 Aligned_cols=22 Identities=9% Similarity=-0.117 Sum_probs=18.5
Q ss_pred hhhhhhccCCCCcEEEEEeCcc
Q 022744 269 SCIKWLNDRANGLLFIYHLGVW 290 (292)
Q Consensus 269 ~cl~WLD~q~~~SVvYVsFGS~ 290 (292)
..-+|++..+.+.+|||+|||.
T Consensus 221 ~~~~~~~~~~~~~~v~v~~G~~ 242 (398)
T 3oti_A 221 VLGDRLPPVPARPEVAITMGTI 242 (398)
T ss_dssp ECCSSCCCCCSSCEEEECCTTT
T ss_pred CCchhhhcCCCCCEEEEEcCCC
Confidence 3457888888889999999997
No 117
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=21.60 E-value=91 Score=24.66 Aligned_cols=38 Identities=13% Similarity=0.191 Sum_probs=27.7
Q ss_pred ceEEEEeCCCc---cChHHHHHHHHHHhhCCCEEEEEeCcc
Q 022744 14 VHCLVLSYPAQ---GHINPLLQFAKRLEHKGLKVTLVTTYF 51 (292)
Q Consensus 14 ~hvv~~p~p~~---GH~~P~l~La~~La~rG~~VT~itt~~ 51 (292)
..|+++|-=+. -=..++-+|++.|.++|.+|.|...+-
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 35777663211 124689999999999999999977665
No 118
>3noh_A Putative peptide binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Ruminococcus gnavus}
Probab=21.27 E-value=61 Score=24.13 Aligned_cols=17 Identities=24% Similarity=0.391 Sum_probs=13.8
Q ss_pred HHHHHHHhhCCCEEEEE
Q 022744 31 LQFAKRLEHKGLKVTLV 47 (292)
Q Consensus 31 l~La~~La~rG~~VT~i 47 (292)
..||++|...|.+|++=
T Consensus 78 ~~Lc~RL~~AG~~V~lk 94 (139)
T 3noh_A 78 DSLCERLNDAGADVQIK 94 (139)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhcCCCceec
Confidence 46778888899999984
No 119
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=21.10 E-value=1.2e+02 Score=24.36 Aligned_cols=34 Identities=3% Similarity=-0.055 Sum_probs=23.6
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHhhCCCEEEEEeC
Q 022744 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTT 49 (292)
Q Consensus 13 ~~hvv~~p~p~~GH~~P~l~La~~La~rG~~VT~itt 49 (292)
+.+.++++-.+.| --.+++++|+++|++|.++.-
T Consensus 6 ~~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 6 EARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp CCCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEES
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeC
Confidence 3345666654433 346899999999999887653
No 120
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=20.88 E-value=95 Score=24.63 Aligned_cols=38 Identities=16% Similarity=0.121 Sum_probs=27.7
Q ss_pred ceEEEEeCCCc---cChHHHHHHHHHHhhCCCEEEEEeCcc
Q 022744 14 VHCLVLSYPAQ---GHINPLLQFAKRLEHKGLKVTLVTTYF 51 (292)
Q Consensus 14 ~hvv~~p~p~~---GH~~P~l~La~~La~rG~~VT~itt~~ 51 (292)
..|+++|-=+. --..++-+|++.|.++|.+|.|...+-
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 35777763211 124689999999999999999977665
No 121
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=20.42 E-value=1.8e+02 Score=21.12 Aligned_cols=42 Identities=17% Similarity=0.086 Sum_probs=24.6
Q ss_pred HHHHHHhhcCCCCccEEEeCCCCc--cHHHHHHH-------hCCCcEEEeccc
Q 022744 103 CELVENMNGSGVPVDCIVYDSFLP--WALDVAKK-------FGLVGAAFLTQS 146 (292)
Q Consensus 103 ~~~l~~l~~~~~~~d~iI~D~~~~--~~~~vA~~-------lgiP~v~f~~~~ 146 (292)
.+.++.+.. .++|+||.|..++ -+.+++++ -++|.+++....
T Consensus 41 ~~al~~l~~--~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 41 REAVRFLSL--TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp HHHHHHHTT--CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred HHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 444444432 3579999998875 24444443 256777665443
No 122
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=20.38 E-value=2e+02 Score=19.70 Aligned_cols=42 Identities=10% Similarity=0.159 Sum_probs=24.9
Q ss_pred HHHHHHhhcCCCCccEEEeCCCCc--cHHHHHHHh-----CCCcEEEeccc
Q 022744 103 CELVENMNGSGVPVDCIVYDSFLP--WALDVAKKF-----GLVGAAFLTQS 146 (292)
Q Consensus 103 ~~~l~~l~~~~~~~d~iI~D~~~~--~~~~vA~~l-----giP~v~f~~~~ 146 (292)
.+.++.+.. .++|+||.|..++ -+.++.+++ ++|.+++....
T Consensus 37 ~~~~~~~~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 37 EAFLAFAPD--VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp HHHHHHGGG--CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred HHHHHHHhc--CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 344444432 3569999998875 344555443 57777765544
No 123
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=20.11 E-value=1.7e+02 Score=20.62 Aligned_cols=33 Identities=12% Similarity=0.304 Sum_probs=20.6
Q ss_pred CCccEEEeCCCCc--cHHHHHHHh-----CCCcEEEeccc
Q 022744 114 VPVDCIVYDSFLP--WALDVAKKF-----GLVGAAFLTQS 146 (292)
Q Consensus 114 ~~~d~iI~D~~~~--~~~~vA~~l-----giP~v~f~~~~ 146 (292)
.++|+||.|..++ -+.++.+++ ++|.+++....
T Consensus 48 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (143)
T 3jte_A 48 NSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHG 87 (143)
T ss_dssp TTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCC
Confidence 4579999998875 244444433 46776665543
No 124
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=20.07 E-value=54 Score=28.31 Aligned_cols=18 Identities=22% Similarity=0.270 Sum_probs=15.8
Q ss_pred HHHHHHHhhCCCEEEEEe
Q 022744 31 LQFAKRLEHKGLKVTLVT 48 (292)
Q Consensus 31 l~La~~La~rG~~VT~it 48 (292)
+-+|..|+++|++|+++=
T Consensus 17 l~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 17 STAARYAAKYGLKTLMIE 34 (397)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCcEEEEe
Confidence 568899999999999983
Done!