BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 022749
         (292 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9C0Y8|YKM6_SCHPO UPF0613 protein PB24D3.06c OS=Schizosaccharomyces pombe (strain 972
           / ATCC 24843) GN=SPAPB24D3.06c PE=3 SV=1
          Length = 316

 Score = 94.0 bits (232), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 89/148 (60%), Gaps = 9/148 (6%)

Query: 97  VIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLIS 156
           ++F+GGL DG     Y++ L   LD+  WS+VQ    SSY G+GT SL++D  ++ + + 
Sbjct: 38  LLFVGGLGDGLLTVPYVQELVNPLDEIGWSIVQVQTQSSYIGWGTGSLKRDDEDLHKAVD 97

Query: 157 YLINKDNSE----GVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE--YRAT 210
           Y ++   ++     +VL+GHSTG Q++++Y+   +     + A I QAPVSDRE  Y+  
Sbjct: 98  YFLHIGGADFSTRKIVLMGHSTGSQNVLYYL-TQSILPNYLIAGIAQAPVSDREAAYQFN 156

Query: 211 LPE-TAAMID-LASSMIREGRGSELMPR 236
             E T  ++D + +  + +G G++++PR
Sbjct: 157 GKEKTKELVDWVKAEYLDKGLGNDVLPR 184


>sp|P38139|LDH1_YEAST Lipid droplet hydrolase 1 OS=Saccharomyces cerevisiae (strain ATCC
           204508 / S288c) GN=LDH1 PE=1 SV=2
          Length = 375

 Score = 36.6 bits (83), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 26/123 (21%)

Query: 98  IFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQD--AMEIDQLI 155
           +F+ GL       E  EPL   +D ++    +  +T    G+G SS   D   +++ +LI
Sbjct: 90  VFVPGLAGNL---EQFEPLLELVDSDQ----KAFLTLDLPGFGHSSEWSDYPMLKVVELI 142

Query: 156 SYLI------------NKDN-----SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIF 198
             L+            N DN        +VL+GHS GC    H    + A ++AV+  + 
Sbjct: 143 FVLVCDVLRKWSTAVPNNDNVNPFNGHKIVLVGHSMGCFLACHLYEQHMADTKAVQTLVL 202

Query: 199 QAP 201
             P
Sbjct: 203 LTP 205


>sp|P55086|PAR2_MOUSE Proteinase-activated receptor 2 OS=Mus musculus GN=F2rl1 PE=1 SV=1
          Length = 399

 Score = 32.3 bits (72), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 2/103 (1%)

Query: 29  SSSTSWFSGIRGCLNRSASCKVTSNSASGGQDMGGPVVMGKNQFRGVLFKYGPKPVQVAF 88
           S S +W  G    L  S SC  T N A G  +  G  ++G+ + +  +   G  PV+  F
Sbjct: 3   SLSLAWLLGGITLLAASVSCSRTENLAPGRNNSKGRSLIGRLETQPPITGKG-VPVEPGF 61

Query: 89  KTGDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFL 131
              ++    I  G LT  F    Y+    I L     +L  FL
Sbjct: 62  SIDEFSAS-ILTGKLTTVFLPVVYIIVFVIGLPSNGMALWIFL 103


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.129    0.381 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,621,277
Number of Sequences: 539616
Number of extensions: 3895951
Number of successful extensions: 31020
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 21964
Number of HSP's gapped (non-prelim): 5599
length of query: 292
length of database: 191,569,459
effective HSP length: 116
effective length of query: 176
effective length of database: 128,974,003
effective search space: 22699424528
effective search space used: 22699424528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)