Query 022749
Match_columns 292
No_of_seqs 333 out of 1616
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 05:51:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022749.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022749hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF08538 DUF1749: Protein of u 100.0 1.1E-32 2.4E-37 255.5 17.1 211 71-285 8-234 (303)
2 KOG4840 Predicted hydrolases o 100.0 1.4E-27 2.9E-32 210.9 14.5 221 64-289 6-228 (299)
3 COG2267 PldB Lysophospholipase 99.8 2.6E-20 5.6E-25 174.1 14.9 182 81-280 17-213 (298)
4 PRK00870 haloalkane dehalogena 99.8 5.9E-18 1.3E-22 156.3 16.9 122 71-202 18-149 (302)
5 PLN02824 hydrolase, alpha/beta 99.8 1.4E-17 3.1E-22 152.9 14.5 110 83-203 17-137 (294)
6 TIGR02240 PHA_depoly_arom poly 99.8 1.5E-17 3.2E-22 151.7 14.4 113 81-204 9-127 (276)
7 PRK03592 haloalkane dehalogena 99.7 2.3E-17 5E-22 151.6 15.1 111 82-203 15-128 (295)
8 PHA02857 monoglyceride lipase; 99.7 3.6E-17 7.9E-22 148.5 15.2 103 92-204 23-133 (276)
9 PLN02298 hydrolase, alpha/beta 99.7 3.5E-17 7.6E-22 153.1 14.2 115 81-204 40-170 (330)
10 PRK10749 lysophospholipase L2; 99.7 3.6E-17 7.9E-22 153.9 13.1 114 81-204 38-167 (330)
11 PRK03204 haloalkane dehalogena 99.7 1.1E-16 2.3E-21 147.7 15.8 118 73-203 15-136 (286)
12 PLN02679 hydrolase, alpha/beta 99.7 8.3E-17 1.8E-21 153.5 15.3 108 85-203 73-191 (360)
13 PLN02965 Probable pheophorbida 99.7 5.1E-17 1.1E-21 146.6 12.0 98 95-202 4-106 (255)
14 TIGR03343 biphenyl_bphD 2-hydr 99.7 8.9E-17 1.9E-21 145.5 13.5 109 83-203 19-136 (282)
15 PLN02385 hydrolase; alpha/beta 99.7 6.9E-17 1.5E-21 152.9 13.2 115 81-204 69-198 (349)
16 PRK10349 carboxylesterase BioH 99.7 5.8E-17 1.3E-21 145.6 10.9 104 86-202 4-108 (256)
17 PLN02211 methyl indole-3-aceta 99.7 1.6E-16 3.6E-21 146.0 13.0 111 83-203 6-122 (273)
18 PF12697 Abhydrolase_6: Alpha/ 99.7 2.2E-16 4.7E-21 134.4 12.5 99 97-206 1-104 (228)
19 TIGR03056 bchO_mg_che_rel puta 99.7 4.4E-16 9.6E-21 139.5 14.3 112 82-204 14-131 (278)
20 PLN02578 hydrolase 99.7 8.5E-16 1.8E-20 146.1 14.5 109 82-202 74-186 (354)
21 TIGR03101 hydr2_PEP hydrolase, 99.7 1.6E-15 3.4E-20 139.9 15.7 105 94-206 25-137 (266)
22 PLN02652 hydrolase; alpha/beta 99.7 1.4E-15 3.1E-20 147.4 15.9 123 74-204 111-246 (395)
23 PRK11126 2-succinyl-6-hydroxy- 99.7 7.4E-16 1.6E-20 136.5 12.8 98 94-203 2-102 (242)
24 TIGR03611 RutD pyrimidine util 99.7 6.7E-16 1.4E-20 135.5 11.9 102 93-205 12-117 (257)
25 PRK06489 hypothetical protein; 99.7 7.4E-16 1.6E-20 146.7 13.2 111 82-202 48-188 (360)
26 PRK10673 acyl-CoA esterase; Pr 99.7 1.4E-15 3E-20 135.5 13.5 98 93-201 15-114 (255)
27 TIGR01738 bioH putative pimelo 99.7 5.6E-16 1.2E-20 134.2 10.6 97 94-203 4-100 (245)
28 TIGR01250 pro_imino_pep_2 prol 99.7 2.7E-15 6E-20 133.3 14.8 103 93-204 24-132 (288)
29 TIGR02427 protocat_pcaD 3-oxoa 99.6 7.3E-16 1.6E-20 133.7 10.6 100 93-203 12-114 (251)
30 TIGR03695 menH_SHCHC 2-succiny 99.6 1.3E-15 2.9E-20 131.5 11.8 99 94-203 1-105 (251)
31 PLN02894 hydrolase, alpha/beta 99.6 2.6E-15 5.5E-20 145.7 14.4 101 92-203 103-211 (402)
32 PRK08775 homoserine O-acetyltr 99.6 1.5E-15 3.2E-20 143.6 12.3 124 74-204 35-174 (343)
33 KOG4409 Predicted hydrolase/ac 99.6 1.1E-15 2.4E-20 143.5 10.6 104 92-206 88-198 (365)
34 PLN03084 alpha/beta hydrolase 99.6 5.2E-15 1.1E-19 143.0 15.3 112 81-203 112-232 (383)
35 PLN03087 BODYGUARD 1 domain co 99.6 5.8E-15 1.3E-19 146.3 15.2 118 76-203 177-309 (481)
36 KOG1455 Lysophospholipase [Lip 99.6 2.4E-15 5.2E-20 139.0 9.6 103 93-204 53-165 (313)
37 PRK10985 putative hydrolase; P 99.6 1E-14 2.2E-19 137.1 14.1 105 93-205 57-170 (324)
38 KOG4178 Soluble epoxide hydrol 99.6 1E-14 2.2E-19 136.2 13.4 113 73-201 23-146 (322)
39 PRK07581 hypothetical protein; 99.6 3.9E-15 8.4E-20 140.0 10.6 112 82-203 24-159 (339)
40 TIGR01249 pro_imino_pep_1 prol 99.6 8.9E-15 1.9E-19 136.0 12.8 111 83-204 14-131 (306)
41 TIGR01392 homoserO_Ac_trn homo 99.6 4.4E-15 9.6E-20 140.8 10.9 115 83-204 15-163 (351)
42 PLN02511 hydrolase 99.6 1.6E-14 3.5E-19 139.5 14.0 105 92-204 98-211 (388)
43 TIGR01607 PST-A Plasmodium sub 99.6 4.5E-15 9.8E-20 140.4 9.7 109 92-204 19-186 (332)
44 PRK14875 acetoin dehydrogenase 99.5 1.1E-13 2.3E-18 130.5 14.1 100 93-203 130-232 (371)
45 PRK13604 luxD acyl transferase 99.5 8.1E-14 1.8E-18 130.6 12.5 100 93-205 36-143 (307)
46 TIGR03100 hydr1_PEP hydrolase, 99.5 9.6E-14 2.1E-18 127.6 12.8 104 93-204 25-135 (274)
47 COG1647 Esterase/lipase [Gener 99.5 1.3E-13 2.7E-18 122.6 12.5 106 85-205 8-120 (243)
48 PRK00175 metX homoserine O-ace 99.5 3.4E-13 7.3E-18 129.7 12.1 115 82-203 31-182 (379)
49 PF12695 Abhydrolase_5: Alpha/ 99.5 5E-13 1.1E-17 109.0 11.0 94 96-203 1-95 (145)
50 PRK10566 esterase; Provisional 99.4 1.1E-12 2.3E-17 117.4 12.1 97 93-200 26-139 (249)
51 PRK05077 frsA fermentation/res 99.4 2.3E-12 5E-17 125.7 15.3 103 93-204 193-301 (414)
52 PLN02980 2-oxoglutarate decarb 99.4 1.9E-12 4.1E-17 144.4 15.9 99 93-202 1370-1479(1655)
53 TIGR01836 PHA_synth_III_C poly 99.4 1E-12 2.2E-17 124.7 12.0 106 93-205 61-173 (350)
54 PLN00021 chlorophyllase 99.4 2.5E-12 5.4E-17 121.3 12.1 107 92-205 50-168 (313)
55 PRK05855 short chain dehydroge 99.4 3.3E-12 7.1E-17 127.0 13.0 105 82-199 11-127 (582)
56 PRK11071 esterase YqiA; Provis 99.4 4.6E-12 1E-16 110.9 11.9 90 95-205 2-95 (190)
57 TIGR03230 lipo_lipase lipoprot 99.4 5.6E-12 1.2E-16 123.6 13.5 104 92-203 39-154 (442)
58 KOG1454 Predicted hydrolase/ac 99.4 2.3E-12 5E-17 122.1 9.3 102 92-203 56-166 (326)
59 cd00707 Pancreat_lipase_like P 99.3 5.5E-12 1.2E-16 116.7 11.1 104 92-203 34-147 (275)
60 TIGR01840 esterase_phb esteras 99.3 3.4E-11 7.4E-16 106.4 12.4 104 92-202 11-129 (212)
61 COG0596 MhpC Predicted hydrola 99.3 9.6E-11 2.1E-15 99.7 13.2 100 94-204 21-124 (282)
62 KOG1838 Alpha/beta hydrolase [ 99.2 8.6E-11 1.9E-15 113.3 13.1 106 93-203 124-236 (409)
63 KOG2564 Predicted acetyltransf 99.2 4.3E-11 9.4E-16 109.8 10.2 101 92-202 72-181 (343)
64 PF07819 PGAP1: PGAP1-like pro 99.2 2.4E-10 5.2E-15 102.9 13.8 107 93-202 3-122 (225)
65 PF00561 Abhydrolase_1: alpha/ 99.2 4.1E-11 8.8E-16 103.7 8.5 71 125-202 1-78 (230)
66 TIGR03502 lipase_Pla1_cef extr 99.2 8.1E-11 1.7E-15 122.1 11.9 106 94-206 449-604 (792)
67 TIGR00976 /NonD putative hydro 99.2 8.5E-11 1.9E-15 118.4 11.7 107 93-206 21-135 (550)
68 TIGR01838 PHA_synth_I poly(R)- 99.2 1.9E-10 4E-15 115.5 12.2 108 93-206 187-305 (532)
69 PLN02872 triacylglycerol lipas 99.2 2.5E-11 5.3E-16 117.9 4.6 107 93-205 73-199 (395)
70 TIGR02821 fghA_ester_D S-formy 99.1 5.1E-10 1.1E-14 102.9 12.8 109 93-206 41-176 (275)
71 KOG1552 Predicted alpha/beta h 99.1 3.1E-10 6.6E-15 103.2 10.9 107 86-204 51-164 (258)
72 KOG2382 Predicted alpha/beta h 99.1 1.1E-10 2.3E-15 109.3 6.9 101 92-202 50-160 (315)
73 PRK10162 acetyl esterase; Prov 99.1 9.9E-10 2.1E-14 103.4 12.7 110 92-205 79-197 (318)
74 COG0429 Predicted hydrolase of 99.1 8.8E-10 1.9E-14 103.5 11.6 105 93-202 74-185 (345)
75 PLN02442 S-formylglutathione h 99.1 1.1E-09 2.5E-14 101.4 11.5 108 92-206 45-181 (283)
76 PF12740 Chlorophyllase2: Chlo 99.0 2.9E-09 6.3E-14 97.7 11.9 106 92-204 15-132 (259)
77 KOG4667 Predicted esterase [Li 99.0 2E-09 4.3E-14 95.8 9.5 104 92-205 31-141 (269)
78 PRK07868 acyl-CoA synthetase; 99.0 2.5E-09 5.4E-14 114.8 12.2 99 93-204 66-178 (994)
79 PRK06765 homoserine O-acetyltr 99.0 3.2E-09 6.9E-14 103.0 11.1 118 83-203 40-196 (389)
80 PF06342 DUF1057: Alpha/beta h 99.0 1E-08 2.2E-13 94.7 13.1 100 94-205 35-139 (297)
81 PF07859 Abhydrolase_3: alpha/ 99.0 2.3E-09 5E-14 93.5 8.4 105 97-205 1-112 (211)
82 PRK11460 putative hydrolase; P 99.0 6.3E-09 1.4E-13 93.7 11.3 103 92-202 14-137 (232)
83 PF01674 Lipase_2: Lipase (cla 98.9 1.2E-09 2.6E-14 98.2 5.9 85 95-186 2-96 (219)
84 PF00975 Thioesterase: Thioest 98.9 1.2E-08 2.7E-13 89.9 11.3 100 95-201 1-102 (229)
85 PLN02733 phosphatidylcholine-s 98.9 1.1E-08 2.4E-13 100.7 10.8 90 109-203 106-201 (440)
86 PF12146 Hydrolase_4: Putative 98.9 4.1E-09 8.9E-14 80.0 5.5 59 93-158 15-74 (79)
87 PF00326 Peptidase_S9: Prolyl 98.8 5.8E-09 1.3E-13 91.7 6.1 86 115-207 5-103 (213)
88 PF07224 Chlorophyllase: Chlor 98.8 1.5E-08 3.3E-13 92.5 8.8 106 92-205 44-159 (307)
89 PF06500 DUF1100: Alpha/beta h 98.7 4.1E-08 9E-13 95.3 9.8 121 74-203 167-296 (411)
90 PF06821 Ser_hydrolase: Serine 98.7 8.9E-08 1.9E-12 82.9 9.9 90 97-205 1-93 (171)
91 PF10230 DUF2305: Uncharacteri 98.7 1.4E-07 3.1E-12 86.9 11.5 105 94-205 2-124 (266)
92 KOG4391 Predicted alpha/beta h 98.7 4.3E-08 9.3E-13 87.5 7.5 104 91-204 75-185 (300)
93 PF05990 DUF900: Alpha/beta hy 98.7 1.4E-07 3E-12 85.5 10.4 110 92-207 16-141 (233)
94 COG2021 MET2 Homoserine acetyl 98.6 2E-07 4.4E-12 88.8 11.1 114 83-203 35-182 (368)
95 TIGR01839 PHA_synth_II poly(R) 98.6 1.2E-07 2.7E-12 95.2 10.1 107 93-206 214-331 (560)
96 PF06028 DUF915: Alpha/beta hy 98.6 4.1E-08 8.8E-13 90.2 6.1 106 93-203 10-143 (255)
97 COG2945 Predicted hydrolase of 98.6 2.8E-07 6.1E-12 80.8 10.4 105 92-204 26-138 (210)
98 COG0657 Aes Esterase/lipase [L 98.6 3E-07 6.4E-12 85.8 11.3 111 93-207 78-195 (312)
99 PF01738 DLH: Dienelactone hyd 98.6 1.5E-07 3.3E-12 83.1 8.7 99 93-201 13-130 (218)
100 PF05728 UPF0227: Uncharacteri 98.6 5.9E-07 1.3E-11 78.9 12.0 92 97-207 2-95 (187)
101 PRK10252 entF enterobactin syn 98.5 7.3E-07 1.6E-11 97.4 11.5 102 93-202 1067-1170(1296)
102 COG0412 Dienelactone hydrolase 98.5 1.3E-06 2.9E-11 79.2 11.2 99 95-201 28-144 (236)
103 PF03403 PAF-AH_p_II: Platelet 98.5 4.6E-07 1E-11 87.7 8.1 103 92-205 98-264 (379)
104 COG3319 Thioesterase domains o 98.4 2E-06 4.2E-11 79.2 10.9 102 95-204 1-104 (257)
105 COG1506 DAP2 Dipeptidyl aminop 98.4 1.5E-06 3.3E-11 89.1 11.3 100 95-203 395-507 (620)
106 PRK10115 protease 2; Provision 98.4 2.3E-06 5.1E-11 88.7 12.7 108 92-207 443-563 (686)
107 KOG2984 Predicted hydrolase [G 98.4 2.4E-07 5.1E-12 82.0 4.3 112 82-203 29-149 (277)
108 COG1075 LipA Predicted acetylt 98.4 1E-06 2.2E-11 84.0 8.7 102 94-203 59-164 (336)
109 COG4757 Predicted alpha/beta h 98.4 6.9E-07 1.5E-11 80.5 6.7 82 96-184 32-124 (281)
110 PF00151 Lipase: Lipase; Inte 98.4 7.3E-07 1.6E-11 84.9 6.9 106 93-203 70-187 (331)
111 COG3208 GrsT Predicted thioest 98.4 2.1E-06 4.5E-11 77.9 9.3 100 93-200 6-109 (244)
112 KOG2624 Triglyceride lipase-ch 98.4 8.4E-07 1.8E-11 86.4 7.0 111 92-206 71-202 (403)
113 PF02129 Peptidase_S15: X-Pro 98.3 8.7E-07 1.9E-11 81.3 6.6 108 93-207 19-140 (272)
114 COG0400 Predicted esterase [Ge 98.3 9.7E-07 2.1E-11 78.8 6.3 107 93-206 17-137 (207)
115 COG4782 Uncharacterized protei 98.3 3.1E-06 6.8E-11 80.6 9.9 112 92-207 114-238 (377)
116 PF02230 Abhydrolase_2: Phosph 98.3 1.1E-05 2.3E-10 71.5 11.3 108 91-204 11-141 (216)
117 COG3545 Predicted esterase of 98.2 5.7E-06 1.2E-10 71.6 8.5 37 164-203 58-94 (181)
118 PF10503 Esterase_phd: Esteras 98.2 8.5E-06 1.8E-10 73.4 10.0 105 93-203 15-132 (220)
119 PF12048 DUF3530: Protein of u 98.2 9.1E-06 2E-10 76.7 9.6 109 92-204 85-230 (310)
120 PF12715 Abhydrolase_7: Abhydr 98.2 5.6E-06 1.2E-10 79.7 8.1 102 93-202 114-259 (390)
121 KOG1515 Arylacetamide deacetyl 98.2 1.9E-05 4.1E-10 75.4 11.5 112 93-208 89-212 (336)
122 smart00824 PKS_TE Thioesterase 98.2 2.2E-05 4.7E-10 66.8 10.9 88 110-202 12-101 (212)
123 COG3571 Predicted hydrolase of 98.2 2.4E-05 5.2E-10 67.2 10.8 105 92-200 12-121 (213)
124 PF02450 LCAT: Lecithin:choles 98.2 5.1E-06 1.1E-10 80.7 7.6 90 112-203 66-160 (389)
125 cd00312 Esterase_lipase Estera 98.0 2.4E-05 5.3E-10 77.4 9.9 109 92-203 93-213 (493)
126 KOG1553 Predicted alpha/beta h 98.0 3.4E-05 7.4E-10 73.3 9.9 102 93-207 242-349 (517)
127 COG4814 Uncharacterized protei 98.0 2.7E-05 5.9E-10 71.1 8.8 105 94-202 45-175 (288)
128 PF05057 DUF676: Putative seri 98.0 2.6E-05 5.5E-10 69.8 8.6 21 165-185 78-98 (217)
129 PRK05371 x-prolyl-dipeptidyl a 98.0 2.7E-05 5.8E-10 81.8 9.3 83 116-205 271-375 (767)
130 PF05448 AXE1: Acetyl xylan es 98.0 5.1E-05 1.1E-09 71.9 10.3 99 93-203 82-209 (320)
131 KOG4627 Kynurenine formamidase 98.0 1.1E-05 2.4E-10 71.7 5.1 108 92-208 65-177 (270)
132 PF06057 VirJ: Bacterial virul 97.9 3.3E-05 7.1E-10 68.0 7.8 104 95-205 3-109 (192)
133 COG4188 Predicted dienelactone 97.9 3E-05 6.6E-10 74.2 8.1 85 93-184 70-178 (365)
134 PF00756 Esterase: Putative es 97.9 1.5E-05 3.3E-10 71.3 4.6 50 152-204 100-151 (251)
135 PF05677 DUF818: Chlamydia CHL 97.9 4.6E-05 9.9E-10 72.4 7.7 91 92-186 135-236 (365)
136 PRK04940 hypothetical protein; 97.8 0.00011 2.3E-09 64.3 8.6 37 165-207 60-96 (180)
137 PF09752 DUF2048: Uncharacteri 97.8 0.00017 3.6E-09 68.9 10.1 102 93-203 91-210 (348)
138 PF02273 Acyl_transf_2: Acyl t 97.8 0.00015 3.2E-09 66.2 9.3 101 93-206 29-137 (294)
139 PF10340 DUF2424: Protein of u 97.8 0.0002 4.3E-09 69.2 10.5 111 93-206 121-238 (374)
140 PF00135 COesterase: Carboxyle 97.8 0.00014 3E-09 72.0 9.8 107 94-202 125-244 (535)
141 KOG3724 Negative regulator of 97.8 7E-05 1.5E-09 77.3 7.7 104 93-200 88-217 (973)
142 PLN02517 phosphatidylcholine-s 97.8 3.5E-05 7.5E-10 77.9 5.4 89 112-202 157-262 (642)
143 KOG2565 Predicted hydrolases o 97.7 0.00026 5.5E-09 68.0 10.0 108 82-199 132-260 (469)
144 COG2272 PnbA Carboxylesterase 97.7 6.7E-05 1.4E-09 74.2 5.7 108 93-203 93-217 (491)
145 KOG2931 Differentiation-relate 97.7 0.00078 1.7E-08 62.9 12.4 104 93-204 45-158 (326)
146 PF05577 Peptidase_S28: Serine 97.7 0.00017 3.6E-09 70.7 8.6 99 94-204 29-149 (434)
147 PF03096 Ndr: Ndr family; Int 97.6 0.00035 7.7E-09 65.0 9.4 103 93-206 22-137 (283)
148 KOG2369 Lecithin:cholesterol a 97.6 0.00014 3E-09 71.5 6.5 99 100-200 110-222 (473)
149 PLN02606 palmitoyl-protein thi 97.5 0.0011 2.4E-08 62.3 11.5 99 93-201 25-130 (306)
150 PF07082 DUF1350: Protein of u 97.5 0.00044 9.5E-09 63.2 8.5 103 93-202 16-124 (250)
151 TIGR01849 PHB_depoly_PhaZ poly 97.5 0.0017 3.7E-08 63.5 13.0 105 94-206 102-211 (406)
152 COG3243 PhaC Poly(3-hydroxyalk 97.5 0.00032 7E-09 68.3 7.3 107 93-206 106-220 (445)
153 KOG2281 Dipeptidyl aminopeptid 97.5 0.00032 7E-09 71.2 7.4 106 92-206 640-765 (867)
154 KOG2541 Palmitoyl protein thio 97.4 0.0024 5.2E-08 58.9 12.4 99 95-201 24-126 (296)
155 COG3509 LpqC Poly(3-hydroxybut 97.4 0.0015 3.2E-08 61.1 10.8 105 93-203 60-179 (312)
156 PTZ00472 serine carboxypeptida 97.3 0.0019 4.2E-08 64.2 11.4 74 133-206 126-219 (462)
157 COG4099 Predicted peptidase [G 97.2 0.0012 2.6E-08 61.9 7.8 40 163-205 267-306 (387)
158 PRK10439 enterobactin/ferric e 97.2 0.003 6.5E-08 62.0 11.1 38 163-203 286-323 (411)
159 cd00741 Lipase Lipase. Lipase 97.2 0.0012 2.6E-08 55.2 7.2 55 149-203 12-67 (153)
160 PLN02633 palmitoyl protein thi 97.2 0.0037 8E-08 59.0 10.7 100 92-201 23-129 (314)
161 PF03583 LIP: Secretory lipase 97.1 0.0052 1.1E-07 57.4 11.0 87 115-207 17-117 (290)
162 KOG3975 Uncharacterized conser 97.1 0.0065 1.4E-07 55.7 10.9 104 92-203 27-147 (301)
163 KOG2100 Dipeptidyl aminopeptid 97.1 0.002 4.3E-08 67.8 8.8 105 93-206 525-647 (755)
164 COG3458 Acetyl esterase (deace 97.1 0.0013 2.7E-08 61.0 6.3 99 92-202 81-209 (321)
165 KOG3847 Phospholipase A2 (plat 97.0 0.00072 1.6E-08 63.7 4.6 103 92-205 116-277 (399)
166 PF02089 Palm_thioest: Palmito 97.0 0.0019 4.2E-08 60.1 7.3 101 93-201 4-114 (279)
167 PF01764 Lipase_3: Lipase (cla 97.0 0.0026 5.7E-08 51.8 6.9 54 150-203 49-106 (140)
168 PF03959 FSH1: Serine hydrolas 97.0 0.0016 3.6E-08 57.7 6.1 108 93-204 3-146 (212)
169 KOG3101 Esterase D [General fu 96.9 0.001 2.2E-08 59.7 4.2 43 162-207 138-180 (283)
170 COG2936 Predicted acyl esteras 96.9 0.0025 5.5E-08 64.4 7.0 80 119-205 75-161 (563)
171 PF11144 DUF2920: Protein of u 96.8 0.017 3.7E-07 56.3 12.2 40 165-207 184-223 (403)
172 cd00519 Lipase_3 Lipase (class 96.8 0.0029 6.3E-08 56.4 6.3 55 149-203 112-168 (229)
173 PF06259 Abhydrolase_8: Alpha/ 96.8 0.028 6.1E-07 49.0 12.0 51 148-201 91-142 (177)
174 PF01083 Cutinase: Cutinase; 96.6 0.0077 1.7E-07 52.4 7.7 56 148-203 64-122 (179)
175 PF08840 BAAT_C: BAAT / Acyl-C 96.5 0.0072 1.6E-07 53.9 6.5 51 149-203 4-56 (213)
176 COG3150 Predicted esterase [Ge 96.3 0.023 4.9E-07 49.3 8.4 93 97-206 2-94 (191)
177 KOG2183 Prolylcarboxypeptidase 96.3 0.0067 1.5E-07 59.1 5.6 98 95-202 81-202 (492)
178 KOG3043 Predicted hydrolase re 96.3 0.014 3E-07 52.8 6.9 103 95-206 40-158 (242)
179 KOG2112 Lysophospholipase [Lip 96.1 0.05 1.1E-06 48.5 9.4 105 94-204 3-129 (206)
180 COG0627 Predicted esterase [Ge 96.0 0.018 4E-07 54.6 6.8 38 166-206 153-190 (316)
181 PLN02454 triacylglycerol lipas 95.9 0.02 4.4E-07 56.1 6.6 55 149-203 210-271 (414)
182 KOG3967 Uncharacterized conser 95.7 0.18 3.9E-06 45.5 11.5 135 92-232 99-253 (297)
183 PF11187 DUF2974: Protein of u 95.6 0.038 8.3E-07 49.9 7.0 57 150-207 70-128 (224)
184 COG2819 Predicted hydrolase of 95.5 0.022 4.8E-07 52.6 5.0 38 163-203 135-172 (264)
185 KOG1516 Carboxylesterase and r 95.4 0.042 9.1E-07 55.2 7.3 108 94-202 112-231 (545)
186 PF11288 DUF3089: Protein of u 95.3 0.039 8.5E-07 49.3 6.0 39 148-186 77-116 (207)
187 PF11339 DUF3141: Protein of u 95.2 0.22 4.8E-06 50.1 11.1 97 93-201 67-173 (581)
188 COG1770 PtrB Protease II [Amin 95.0 0.1 2.2E-06 53.6 8.6 108 92-207 446-566 (682)
189 COG3946 VirJ Type IV secretory 95.0 0.056 1.2E-06 52.7 6.4 82 93-181 259-342 (456)
190 KOG2237 Predicted serine prote 95.0 0.017 3.8E-07 58.9 3.0 109 92-208 468-589 (712)
191 PLN02571 triacylglycerol lipas 94.5 0.095 2E-06 51.5 6.6 37 150-186 209-247 (413)
192 PLN02162 triacylglycerol lipas 94.5 0.065 1.4E-06 53.3 5.4 36 149-184 262-297 (475)
193 KOG2182 Hydrolytic enzymes of 94.4 0.34 7.3E-06 48.5 10.2 100 92-201 84-205 (514)
194 PLN00413 triacylglycerol lipas 94.3 0.074 1.6E-06 53.0 5.4 36 150-185 269-304 (479)
195 PF05277 DUF726: Protein of un 93.8 0.13 2.7E-06 49.5 5.9 42 162-203 217-260 (345)
196 PLN02934 triacylglycerol lipas 93.8 0.092 2E-06 52.7 5.1 36 150-185 306-341 (515)
197 PLN02408 phospholipase A1 93.6 0.12 2.6E-06 50.1 5.4 37 150-186 183-221 (365)
198 PLN02310 triacylglycerol lipas 93.5 0.093 2E-06 51.4 4.5 22 164-185 208-229 (405)
199 PF04301 DUF452: Protein of un 93.4 0.15 3.3E-06 45.7 5.4 79 92-201 9-88 (213)
200 PLN03037 lipase class 3 family 92.6 0.14 3.1E-06 51.5 4.3 21 165-185 318-338 (525)
201 PLN02324 triacylglycerol lipas 92.6 0.2 4.4E-06 49.2 5.3 36 150-185 198-235 (415)
202 PLN02847 triacylglycerol lipas 92.4 0.21 4.6E-06 51.0 5.3 33 153-185 239-271 (633)
203 PLN02802 triacylglycerol lipas 92.0 0.25 5.4E-06 49.6 5.2 37 150-186 313-351 (509)
204 PLN02719 triacylglycerol lipas 91.6 0.29 6.3E-06 49.2 5.2 37 149-185 277-318 (518)
205 PLN02753 triacylglycerol lipas 91.5 0.3 6.5E-06 49.3 5.2 37 149-185 291-332 (531)
206 COG1505 Serine proteases of th 91.3 0.28 6.1E-06 50.1 4.8 105 93-206 420-538 (648)
207 PLN02761 lipase class 3 family 91.1 0.35 7.6E-06 48.8 5.2 21 165-185 294-314 (527)
208 PF08237 PE-PPE: PE-PPE domain 90.8 1.6 3.4E-05 39.5 8.7 41 163-203 46-89 (225)
209 COG2382 Fes Enterochelin ester 90.5 0.71 1.5E-05 43.5 6.3 40 164-206 176-215 (299)
210 PLN02209 serine carboxypeptida 89.9 3.3 7.3E-05 41.1 10.9 45 163-207 165-216 (437)
211 KOG4569 Predicted lipase [Lipi 89.7 0.54 1.2E-05 45.0 5.0 37 149-185 155-191 (336)
212 KOG3253 Predicted alpha/beta h 89.5 0.7 1.5E-05 47.4 5.7 103 93-200 175-283 (784)
213 PF07519 Tannase: Tannase and 89.2 1.1 2.4E-05 44.8 7.1 40 163-205 113-152 (474)
214 PLN03016 sinapoylglucose-malat 89.0 2.8 6E-05 41.6 9.5 44 163-206 163-213 (433)
215 KOG4540 Putative lipase essent 86.5 1.3 2.8E-05 41.8 5.1 46 152-202 263-308 (425)
216 COG5153 CVT17 Putative lipase 86.5 1.3 2.8E-05 41.8 5.1 46 152-202 263-308 (425)
217 PF00326 Peptidase_S9: Prolyl 86.3 1.4 3E-05 38.2 5.1 68 93-162 143-210 (213)
218 COG1506 DAP2 Dipeptidyl aminop 85.1 3 6.4E-05 43.1 7.6 69 92-162 549-617 (620)
219 KOG4372 Predicted alpha/beta h 83.8 1.2 2.5E-05 43.7 3.7 81 93-181 79-166 (405)
220 PF05576 Peptidase_S37: PS-10 81.9 2.2 4.7E-05 42.1 4.7 100 91-203 60-170 (448)
221 PF00450 Peptidase_S10: Serine 81.7 5.2 0.00011 38.2 7.4 129 72-207 12-185 (415)
222 COG3673 Uncharacterized conser 81.3 13 0.00027 35.9 9.4 88 94-185 31-142 (423)
223 COG1448 TyrB Aspartate/tyrosin 80.0 6.6 0.00014 38.3 7.3 90 93-201 170-263 (396)
224 PF05705 DUF829: Eukaryotic pr 79.5 18 0.00039 32.1 9.7 102 96-203 1-112 (240)
225 KOG1551 Uncharacterized conser 79.5 1.5 3.3E-05 40.9 2.7 98 92-198 111-225 (371)
226 KOG4388 Hormone-sensitive lipa 79.4 5.4 0.00012 41.1 6.7 100 94-200 396-505 (880)
227 KOG1202 Animal-type fatty acid 79.1 9.4 0.0002 42.6 8.6 92 92-201 2121-2217(2376)
228 PF02230 Abhydrolase_2: Phosph 78.7 2.2 4.7E-05 37.5 3.3 59 94-159 155-213 (216)
229 COG4947 Uncharacterized protei 77.4 7.2 0.00016 34.4 6.0 52 152-206 88-139 (227)
230 COG0529 CysC Adenylylsulfate k 76.9 11 0.00024 33.3 7.0 48 92-142 20-67 (197)
231 KOG2029 Uncharacterized conser 75.0 4.8 0.0001 41.4 5.0 50 153-202 512-571 (697)
232 PF09994 DUF2235: Uncharacteri 72.8 27 0.0006 32.2 9.2 37 149-185 75-112 (277)
233 PLN02213 sinapoylglucose-malat 71.0 16 0.00035 34.4 7.3 74 133-206 6-99 (319)
234 PRK11460 putative hydrolase; P 70.4 9.8 0.00021 33.9 5.5 59 93-160 147-207 (232)
235 COG2939 Carboxypeptidase C (ca 68.0 22 0.00047 36.0 7.7 58 149-206 177-239 (498)
236 TIGR03712 acc_sec_asp2 accesso 67.0 33 0.00073 34.6 8.7 102 86-202 279-389 (511)
237 PF10081 Abhydrolase_9: Alpha/ 60.9 73 0.0016 30.0 9.3 109 94-205 32-149 (289)
238 KOG2385 Uncharacterized conser 59.2 27 0.00059 35.6 6.5 41 162-202 444-486 (633)
239 PF14606 Lipase_GDSL_3: GDSL-l 58.9 23 0.00049 31.0 5.3 52 115-172 50-101 (178)
240 COG0400 Predicted esterase [Ge 57.9 23 0.0005 31.5 5.4 58 93-159 145-203 (207)
241 COG4822 CbiK Cobalamin biosynt 57.8 30 0.00065 31.5 5.9 60 95-170 139-199 (265)
242 PRK05579 bifunctional phosphop 57.2 72 0.0016 31.3 9.1 77 94-172 116-196 (399)
243 PF09949 DUF2183: Uncharacteri 55.8 72 0.0016 25.1 7.3 82 110-198 10-97 (100)
244 KOG2872 Uroporphyrinogen decar 55.7 36 0.00078 32.3 6.3 70 94-173 252-336 (359)
245 TIGR00521 coaBC_dfp phosphopan 55.6 89 0.0019 30.6 9.4 89 95-185 113-224 (390)
246 KOG4389 Acetylcholinesterase/B 55.2 14 0.00031 37.4 3.9 109 94-206 135-258 (601)
247 KOG2551 Phospholipase/carboxyh 54.8 65 0.0014 29.3 7.7 53 151-205 92-149 (230)
248 KOG1282 Serine carboxypeptidas 53.4 1.5E+02 0.0031 29.9 10.6 60 148-207 148-217 (454)
249 KOG2521 Uncharacterized conser 53.2 86 0.0019 30.4 8.7 103 96-200 40-149 (350)
250 PRK07313 phosphopantothenoylcy 52.3 45 0.00098 29.0 6.2 62 93-157 112-176 (182)
251 COG2240 PdxK Pyridoxal/pyridox 51.4 2.1E+02 0.0046 26.9 10.7 85 118-204 22-114 (281)
252 cd03818 GT1_ExpC_like This fam 50.7 98 0.0021 29.3 8.8 31 97-132 2-32 (396)
253 COG2830 Uncharacterized protei 50.2 19 0.00042 31.4 3.4 77 95-201 12-88 (214)
254 KOG2112 Lysophospholipase [Lip 48.9 26 0.00057 31.3 4.2 60 94-157 144-203 (206)
255 PRK12467 peptide synthase; Pro 48.4 1E+02 0.0022 39.0 10.4 98 94-199 3692-3791(3956)
256 PF06441 EHN: Epoxide hydrolas 47.7 29 0.00062 27.9 3.9 24 83-106 77-104 (112)
257 PF04083 Abhydro_lipase: Parti 46.0 16 0.00034 26.3 1.9 13 93-105 42-54 (63)
258 PF07519 Tannase: Tannase and 45.5 64 0.0014 32.4 6.8 79 93-177 352-441 (474)
259 COG3340 PepE Peptidase E [Amin 43.4 73 0.0016 28.8 6.1 41 92-132 30-70 (224)
260 KOG1200 Mitochondrial/plastidi 43.3 1.2E+02 0.0025 27.6 7.3 50 114-163 28-89 (256)
261 COG3562 KpsS Capsule polysacch 43.1 1.3E+02 0.0029 29.2 8.1 75 95-174 14-92 (403)
262 PRK10566 esterase; Provisional 42.5 58 0.0013 28.4 5.5 60 94-160 186-247 (249)
263 cd03413 CbiK_C Anaerobic cobal 42.3 57 0.0012 25.6 4.8 59 96-170 3-62 (103)
264 TIGR03131 malonate_mdcH malona 42.0 41 0.0009 30.8 4.6 23 161-183 72-94 (295)
265 PRK10279 hypothetical protein; 41.9 33 0.00071 32.3 3.9 32 154-186 23-54 (300)
266 PRK05568 flavodoxin; Provision 41.7 1.8E+02 0.0039 23.2 8.6 65 109-173 15-91 (142)
267 PF06792 UPF0261: Uncharacteri 41.7 3E+02 0.0064 27.3 10.5 35 162-199 92-126 (403)
268 cd03409 Chelatase_Class_II Cla 40.9 65 0.0014 24.2 4.9 62 96-170 2-65 (101)
269 PLN02496 probable phosphopanto 40.7 94 0.002 27.9 6.4 37 94-130 132-168 (209)
270 TIGR02884 spore_pdaA delta-lac 40.5 39 0.00085 30.1 4.1 35 94-130 186-220 (224)
271 PF03283 PAE: Pectinacetyleste 40.2 87 0.0019 30.3 6.6 38 148-185 137-176 (361)
272 smart00827 PKS_AT Acyl transfe 40.2 45 0.00097 30.4 4.5 24 160-183 77-100 (298)
273 KOG1434 Meiotic recombination 40.1 13 0.00029 34.7 0.9 29 113-141 199-233 (335)
274 TIGR00128 fabD malonyl CoA-acy 39.7 43 0.00094 30.3 4.3 22 162-183 79-101 (290)
275 cd07198 Patatin Patatin-like p 39.2 43 0.00093 28.2 4.0 32 154-186 16-47 (172)
276 PRK02399 hypothetical protein; 38.8 4E+02 0.0087 26.4 11.0 37 160-199 92-128 (406)
277 COG1073 Hydrolases of the alph 38.6 51 0.0011 28.9 4.5 36 93-131 48-83 (299)
278 PRK06731 flhF flagellar biosyn 38.5 2.1E+02 0.0045 26.5 8.7 65 124-199 154-219 (270)
279 PF00698 Acyl_transf_1: Acyl t 38.3 28 0.0006 32.5 2.8 23 160-182 79-101 (318)
280 KOG1420 Ca2+-activated K+ chan 38.3 21 0.00045 36.9 2.1 12 163-174 356-367 (1103)
281 PF14253 AbiH: Bacteriophage a 37.8 36 0.00078 30.7 3.4 22 163-184 233-254 (270)
282 cd07225 Pat_PNPLA6_PNPLA7 Pata 37.8 42 0.00092 31.6 4.0 59 113-186 4-64 (306)
283 KOG1610 Corticosteroid 11-beta 37.4 70 0.0015 30.6 5.3 67 93-166 27-106 (322)
284 TIGR02113 coaC_strep phosphopa 36.6 1.1E+02 0.0023 26.5 6.1 38 93-130 111-148 (177)
285 cd07207 Pat_ExoU_VipD_like Exo 36.2 53 0.0011 27.9 4.1 33 153-186 16-48 (194)
286 PRK11613 folP dihydropteroate 35.7 2.1E+02 0.0045 26.8 8.2 59 112-179 164-225 (282)
287 cd01714 ETF_beta The electron 35.4 85 0.0018 27.6 5.3 62 116-186 68-134 (202)
288 cd07227 Pat_Fungal_NTE1 Fungal 34.8 51 0.0011 30.5 4.0 32 154-186 28-59 (269)
289 PF12242 Eno-Rase_NADH_b: NAD( 34.5 1.1E+02 0.0023 23.2 4.9 39 148-186 20-61 (78)
290 COG1752 RssA Predicted esteras 33.5 52 0.0011 30.7 3.8 25 162-186 36-60 (306)
291 PF09419 PGP_phosphatase: Mito 32.9 1E+02 0.0022 26.6 5.3 52 120-175 36-88 (168)
292 TIGR02816 pfaB_fam PfaB family 32.1 55 0.0012 33.5 4.0 25 160-184 260-284 (538)
293 cd07210 Pat_hypo_W_succinogene 31.3 76 0.0016 28.3 4.4 31 155-186 19-49 (221)
294 cd07212 Pat_PNPLA9 Patatin-lik 30.9 69 0.0015 30.2 4.2 19 168-186 35-53 (312)
295 TIGR02764 spore_ybaN_pdaB poly 30.7 58 0.0013 27.8 3.4 36 95-130 152-187 (191)
296 COG0552 FtsY Signal recognitio 30.2 72 0.0016 30.7 4.2 70 92-177 136-205 (340)
297 cd07209 Pat_hypo_Ecoli_Z1214_l 30.0 70 0.0015 28.2 3.9 32 154-186 16-47 (215)
298 cd01841 NnaC_like NnaC (CMP-Ne 29.7 2.1E+02 0.0045 23.4 6.6 74 95-171 23-97 (174)
299 PF06564 YhjQ: YhjQ protein; 29.6 76 0.0017 29.1 4.1 38 96-133 2-39 (243)
300 KOG1465 Translation initiation 29.5 3.7E+02 0.0081 25.8 8.6 95 94-203 162-274 (353)
301 PRK05282 (alpha)-aspartyl dipe 29.4 1.3E+02 0.0027 27.4 5.5 39 94-132 31-69 (233)
302 PLN02834 3-dehydroquinate synt 29.4 5.7E+02 0.012 25.3 12.4 45 112-161 115-159 (433)
303 COG0541 Ffh Signal recognition 28.5 2.8E+02 0.0061 27.8 8.0 72 118-199 176-247 (451)
304 cd07205 Pat_PNPLA6_PNPLA7_NTE1 28.4 95 0.0021 26.0 4.3 32 154-186 18-49 (175)
305 PRK12595 bifunctional 3-deoxy- 28.0 5.6E+02 0.012 24.8 13.7 94 92-199 223-322 (360)
306 PRK06171 sorbitol-6-phosphate 27.4 4.2E+02 0.009 23.2 8.6 60 114-175 23-86 (266)
307 PRK13230 nitrogenase reductase 27.1 1.1E+02 0.0024 27.8 4.8 35 96-132 3-37 (279)
308 KOG4127 Renal dipeptidase [Pos 27.1 1.5E+02 0.0032 29.1 5.7 74 93-170 265-340 (419)
309 PRK10115 protease 2; Provision 27.0 1.1E+02 0.0024 32.1 5.3 69 93-161 605-675 (686)
310 PF14359 DUF4406: Domain of un 27.0 2.9E+02 0.0063 21.2 7.2 69 109-186 14-85 (92)
311 PF00484 Pro_CA: Carbonic anhy 27.0 86 0.0019 25.8 3.7 34 148-181 38-71 (153)
312 PRK04435 hypothetical protein; 26.8 2.2E+02 0.0048 23.7 6.2 61 112-172 82-146 (147)
313 COG0218 Predicted GTPase [Gene 26.6 62 0.0013 28.9 2.9 37 134-170 75-113 (200)
314 PRK13397 3-deoxy-7-phosphohept 26.6 5E+02 0.011 23.9 8.9 90 92-199 120-219 (250)
315 TIGR02873 spore_ylxY probable 26.6 83 0.0018 29.0 3.9 33 95-130 231-263 (268)
316 cd07230 Pat_TGL4-5_like Triacy 26.4 56 0.0012 32.3 2.9 32 154-186 91-122 (421)
317 COG3727 Vsr DNA G:T-mismatch r 26.2 1.4E+02 0.003 25.2 4.6 37 93-129 56-113 (150)
318 COG0698 RpiB Ribose 5-phosphat 25.7 3.3E+02 0.0072 23.2 7.0 59 114-179 16-75 (151)
319 PF10686 DUF2493: Protein of u 25.7 1.3E+02 0.0027 22.1 4.0 39 94-140 31-71 (71)
320 TIGR00682 lpxK tetraacyldisacc 25.4 1.1E+02 0.0023 29.1 4.5 44 94-142 27-71 (311)
321 TIGR00632 vsr DNA mismatch end 25.2 98 0.0021 25.2 3.6 14 116-129 99-112 (117)
322 KOG1209 1-Acyl dihydroxyaceton 25.1 2.7E+02 0.0059 25.6 6.7 33 94-130 6-38 (289)
323 PRK05571 ribose-5-phosphate is 24.8 3.2E+02 0.0069 23.1 6.8 76 112-201 14-90 (148)
324 PRK07259 dihydroorotate dehydr 24.8 5.5E+02 0.012 23.6 11.1 99 94-201 92-191 (301)
325 COG1591 Holliday junction reso 24.8 4E+02 0.0086 22.4 7.1 18 111-128 8-25 (137)
326 cd07232 Pat_PLPL Patain-like p 24.1 40 0.00086 33.2 1.3 39 154-196 85-123 (407)
327 TIGR01007 eps_fam capsular exo 23.8 1.8E+02 0.0039 24.9 5.3 38 95-132 17-54 (204)
328 cd07224 Pat_like Patatin-like 23.6 1.1E+02 0.0024 27.4 4.0 32 154-186 17-50 (233)
329 PF04016 DUF364: Domain of unk 23.4 61 0.0013 27.1 2.2 38 93-140 10-47 (147)
330 cd03416 CbiX_SirB_N Sirohydroc 23.4 1.2E+02 0.0026 23.0 3.7 27 96-123 2-28 (101)
331 PF01872 RibD_C: RibD C-termin 23.3 2.7E+02 0.0059 23.8 6.4 45 150-203 122-167 (200)
332 PF05673 DUF815: Protein of un 23.3 2.1E+02 0.0046 26.4 5.8 59 96-170 53-111 (249)
333 cd07228 Pat_NTE_like_bacteria 23.2 1.3E+02 0.0029 25.3 4.3 32 154-186 18-49 (175)
334 PLN02917 CMP-KDO synthetase 22.9 39 0.00083 31.6 0.9 14 26-39 9-23 (293)
335 PRK06523 short chain dehydroge 22.9 3.9E+02 0.0084 23.3 7.5 49 114-163 23-76 (260)
336 COG2185 Sbm Methylmalonyl-CoA 22.8 4.7E+02 0.01 22.1 7.5 72 94-184 13-84 (143)
337 cd02040 NifH NifH gene encodes 22.8 1.6E+02 0.0034 26.3 4.9 35 96-132 3-37 (270)
338 cd04740 DHOD_1B_like Dihydroor 22.7 5.9E+02 0.013 23.2 11.0 99 94-201 90-188 (296)
339 COG1856 Uncharacterized homolo 22.6 5.9E+02 0.013 23.5 8.3 74 117-199 103-186 (275)
340 PF01583 APS_kinase: Adenylyls 22.5 1.3E+02 0.0028 25.6 4.0 38 94-132 1-38 (156)
341 PF00448 SRP54: SRP54-type pro 22.4 1.7E+02 0.0038 25.5 5.0 73 117-199 76-148 (196)
342 PRK05854 short chain dehydroge 22.3 6.1E+02 0.013 23.2 9.5 75 115-203 29-104 (313)
343 cd07208 Pat_hypo_Ecoli_yjju_li 22.1 1.2E+02 0.0026 27.4 4.1 32 154-186 16-48 (266)
344 TIGR01361 DAHP_synth_Bsub phos 22.1 6.1E+02 0.013 23.2 9.2 72 92-175 130-206 (260)
345 PRK10343 RNA-binding protein Y 21.7 4E+02 0.0087 20.9 6.6 64 93-172 17-80 (97)
346 cd02070 corrinoid_protein_B12- 21.6 2.3E+02 0.005 24.6 5.6 15 114-128 100-114 (201)
347 cd04888 ACT_PheB-BS C-terminal 21.3 1.9E+02 0.004 20.2 4.2 59 113-171 14-76 (76)
348 cd02067 B12-binding B12 bindin 21.3 2.6E+02 0.0057 21.7 5.4 15 114-128 17-31 (119)
349 cd02810 DHOD_DHPD_FMN Dihydroo 21.1 6.3E+02 0.014 22.9 10.6 99 94-202 99-199 (289)
350 cd04502 SGNH_hydrolase_like_7 21.1 3.2E+02 0.007 22.3 6.2 24 148-171 73-96 (171)
351 PLN02978 pyridoxal kinase 20.9 3.3E+02 0.0071 25.4 6.8 94 99-203 24-126 (308)
352 KOG2100 Dipeptidyl aminopeptid 20.9 3.9E+02 0.0084 28.6 8.0 65 94-160 682-746 (755)
353 cd02037 MRP-like MRP (Multiple 20.6 1.6E+02 0.0035 24.4 4.2 24 113-138 17-40 (169)
354 COG2453 CDC14 Predicted protei 20.4 2.2E+02 0.0048 24.3 5.1 41 146-186 86-130 (180)
355 PRK12724 flagellar biosynthesi 20.3 3.5E+02 0.0076 27.0 7.0 75 115-199 290-367 (432)
356 COG3887 Predicted signaling pr 20.3 2.6E+02 0.0056 29.3 6.1 48 148-201 323-376 (655)
357 PF02606 LpxK: Tetraacyldisacc 20.3 1.6E+02 0.0035 28.0 4.6 45 94-143 34-79 (326)
358 PRK06398 aldose dehydrogenase; 20.2 3.7E+02 0.008 23.7 6.8 61 95-163 7-71 (258)
359 KOG2614 Kynurenine 3-monooxyge 20.2 1.1E+02 0.0024 30.3 3.5 41 95-142 3-43 (420)
360 PRK13982 bifunctional SbtC-lik 20.1 3.8E+02 0.0082 27.1 7.3 37 94-130 180-216 (475)
361 cd02801 DUS_like_FMN Dihydrour 20.0 5.8E+02 0.012 22.1 7.9 100 92-201 53-160 (231)
No 1
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=100.00 E-value=1.1e-32 Score=255.48 Aligned_cols=211 Identities=40% Similarity=0.635 Sum_probs=145.9
Q ss_pred ccceEEEEeCCCCceEEEEeCC--CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcH
Q 022749 71 QFRGVLFKYGPKPVQVAFKTGD--YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDA 148 (292)
Q Consensus 71 ~~~g~l~~y~~~~~~~~y~~g~--~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v 148 (292)
++.|++|.|.++.+.++|...+ ++.+||||+|++||+++.+|...|+++|.+.+|.|+++.|+..|.|||.+++++|+
T Consensus 8 ~~~G~lh~Y~~~~~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~ 87 (303)
T PF08538_consen 8 PQQGILHHYTPKLVAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDV 87 (303)
T ss_dssp -EEEEEEEECCTTEEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHH
T ss_pred CCceEEEEECCCCeEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHH
Confidence 4569999999998889998754 67899999999999999999999999999889999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc----CCCcEEEEEeChHHHHHHHHHHHhcc--CccccceEEEeCCCCChhhhccc----hhHHHHH
Q 022749 149 MEIDQLISYLINKD----NSEGVVLLGHSTGCQDIVHYMRANAA--CSRAVRAAIFQAPVSDREYRATL----PETAAMI 218 (292)
Q Consensus 149 ~Dl~~~i~~l~~~~----~~~~vvLvGHSmGG~ial~ya~~~~~--~p~~V~glIL~aP~~d~~~~~~~----~~~~~~~ 218 (292)
+||.++|++|+... +.++|+|+|||+|||.+++|+.+... ...+|+|+||+||++|+++.... +.+++++
T Consensus 88 ~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v 167 (303)
T PF08538_consen 88 EEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELV 167 (303)
T ss_dssp HHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHH
T ss_pred HHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHH
Confidence 99999999998763 57899999999999999999998632 23689999999999999987653 2367889
Q ss_pred HHHHHHHHcCCCCCCCCCCCC----CCCCCcHHHHhhcCcccccchhcCCCchhhhhhhhHhhhccccccc
Q 022749 219 DLASSMIREGRGSELMPREAD----PCSPITAQRWLYLCILAIVEYSTSHFSLSCYFRQFWCCELLNLSCS 285 (292)
Q Consensus 219 ~~a~~~i~~g~~~~~lp~~~~----~~~p~ta~r~lS~~~~~~d~y~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (292)
+.|++++++|+++++||.... ++.|+||+||+|++.+++|+ |.|+- +-.-......|=.+.|+
T Consensus 168 ~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdD---D~FSS-DL~de~l~~tfG~v~~p 234 (303)
T PF08538_consen 168 ALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDD---DYFSS-DLSDERLKKTFGKVSKP 234 (303)
T ss_dssp HHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHH---HTHHH-HHTT-HHHHTGGG--S-
T ss_pred HHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccCCCCcc---cccCC-CCCHHHHHHHhccCCCc
Confidence 999999999999999998642 38999999999999999876 33331 12222344445555554
No 2
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.95 E-value=1.4e-27 Score=210.93 Aligned_cols=221 Identities=40% Similarity=0.575 Sum_probs=185.8
Q ss_pred cccccccccceEEEEeCCCCceEEEEeCCCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCC
Q 022749 64 PVVMGKNQFRGVLFKYGPKPVQVAFKTGDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS 143 (292)
Q Consensus 64 ~~~~~~~~~~g~l~~y~~~~~~~~y~~g~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~ 143 (292)
|+-|.+..++|+++.|+.+..+++|..+-.+-.||||.|+++++....|..+++.+|.+.+|.++++.++..|-|||.++
T Consensus 6 pGI~~~~~~rgvlF~y~~Ks~~va~~~gv~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~s 85 (299)
T KOG4840|consen 6 PGIMSREELRGVLFVYDSKSSLVAYSNGVESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFS 85 (299)
T ss_pred cccccchheeeeEEEecCccceeeeccCceEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccccccc
Confidence 45578889999999999999999999887788999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChhhhccch-hHHHHHHH-H
Q 022749 144 LQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLP-ETAAMIDL-A 221 (292)
Q Consensus 144 ~~~~v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~~~~~~~-~~~~~~~~-a 221 (292)
+.+|++|++.+++++..+-.-.+|+|+|||+||+.+++|+.. ..++..|.+.||+||++|++.....+ ..+.++.+ +
T Consensus 86 lk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTn-t~~~r~iraaIlqApVSDrEYqf~~~~etk~l~d~l~ 164 (299)
T KOG4840|consen 86 LKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTN-TTKDRKIRAAILQAPVSDREYQFLEEHETKDLSDLLR 164 (299)
T ss_pred ccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHh-ccchHHHHHHHHhCccchhhhhhccccccHHHHHHHH
Confidence 999999999999998755445699999999999999999943 35688999999999999999654322 34566663 3
Q ss_pred HHHHHcCCCCCCCCCCCCCCCCCcHHHHhhcCcccccchhcCCCchhhhhhhhHhhhcccccccccee
Q 022749 222 SSMIREGRGSELMPREADPCSPITAQRWLYLCILAIVEYSTSHFSLSCYFRQFWCCELLNLSCSQSLI 289 (292)
Q Consensus 222 ~~~i~~g~~~~~lp~~~~~~~p~ta~r~lS~~~~~~d~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (292)
.+++..|++++++|+......|++|+|+++++..-+++ |+|+-- --.+-|..||-+++-..+-|
T Consensus 165 a~~~~~grgedv~pR~~~~~~p~sa~R~~dl~~~~G~d---DmFSSd-LS~D~f~~~lg~gsta~~qi 228 (299)
T KOG4840|consen 165 AAKETIGRGEDVAPRYGGGSQPLSARRALDLFSRYGKD---DMFSSD-LSEDRFYMELGEGSTAGAQI 228 (299)
T ss_pred HHHhhhccccccccccCCCCccccHHHHHHHHHHhCCc---cchhcc-cchhHHHHHhccCCCCCceE
Confidence 45677899999999998778999999999999887776 666621 22567888888886544433
No 3
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.84 E-value=2.6e-20 Score=174.14 Aligned_cols=182 Identities=16% Similarity=0.166 Sum_probs=128.1
Q ss_pred CCCceEEEEeC----CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCC--C-------CCc
Q 022749 81 PKPVQVAFKTG----DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS--L-------QQD 147 (292)
Q Consensus 81 ~~~~~~~y~~g----~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~--~-------~~~ 147 (292)
.+++.++|... +...+||++||++| +..+|. .+++.|.++||.|+ ++|+||||.|. . .+.
T Consensus 17 ~d~~~~~~~~~~~~~~~~g~Vvl~HG~~E--h~~ry~-~la~~l~~~G~~V~----~~D~RGhG~S~r~~rg~~~~f~~~ 89 (298)
T COG2267 17 ADGTRLRYRTWAAPEPPKGVVVLVHGLGE--HSGRYE-ELADDLAARGFDVY----ALDLRGHGRSPRGQRGHVDSFADY 89 (298)
T ss_pred CCCceEEEEeecCCCCCCcEEEEecCchH--HHHHHH-HHHHHHHhCCCEEE----EecCCCCCCCCCCCcCCchhHHHH
Confidence 33445555432 22378999999998 556665 69999999999999 88889999996 2 234
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChhhhccchhHHHHHHHHHHHHHc
Q 022749 148 AMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIRE 227 (292)
Q Consensus 148 v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~~~~~~~~~~~~~~~a~~~i~~ 227 (292)
+.|++++++.+.......+++|+||||||.|++.|+.++ +.+|+++||.+|......... .......... ..
T Consensus 90 ~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~---~~~i~~~vLssP~~~l~~~~~---~~~~~~~~~~--~~ 161 (298)
T COG2267 90 VDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARY---PPRIDGLVLSSPALGLGGAIL---RLILARLALK--LL 161 (298)
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhC---CccccEEEEECccccCChhHH---HHHHHHHhcc--cc
Confidence 567777777776545678999999999999999999999 889999999999887663000 0001110000 01
Q ss_pred CCCCCCCCCCCCCC--CCCcHHHHhhcCcccccchhcCCCchhhhhhhhHhhhcc
Q 022749 228 GRGSELMPREADPC--SPITAQRWLYLCILAIVEYSTSHFSLSCYFRQFWCCELL 280 (292)
Q Consensus 228 g~~~~~lp~~~~~~--~p~ta~r~lS~~~~~~d~y~~~~~~~~~~~~~~~~~~~~ 280 (292)
+ .+.|...... ..-+...|+|.+..+++.|..||..........|..+++
T Consensus 162 ~---~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~ 213 (298)
T COG2267 162 G---RIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLAL 213 (298)
T ss_pred c---ccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHH
Confidence 1 1111111100 124558899999999999999998777788889988654
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.78 E-value=5.9e-18 Score=156.34 Aligned_cols=122 Identities=9% Similarity=0.090 Sum_probs=93.7
Q ss_pred ccceEEEEeCC---CCceEEEEeCC--CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCC
Q 022749 71 QFRGVLFKYGP---KPVQVAFKTGD--YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ 145 (292)
Q Consensus 71 ~~~g~l~~y~~---~~~~~~y~~g~--~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~ 145 (292)
++.++.+..+. .+.+++|...+ .+++||||||++ .....|..+++.|.+.||+|+ ++|+||||.|+..
T Consensus 18 ~~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~---~~~~~w~~~~~~L~~~gy~vi----~~Dl~G~G~S~~~ 90 (302)
T PRK00870 18 PFAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEP---SWSYLYRKMIPILAAAGHRVI----APDLIGFGRSDKP 90 (302)
T ss_pred CCCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCC---CchhhHHHHHHHHHhCCCEEE----EECCCCCCCCCCC
Confidence 34566677653 23568887643 468999999998 455668899999987799999 7788999999753
Q ss_pred C-----cHHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 146 Q-----DAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 146 ~-----~v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
. ..+++.+.+..+.++++.++++|+||||||.+++.++.++ |++|+++|+++|.
T Consensus 91 ~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~ 149 (302)
T PRK00870 91 TRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEH---PDRFARLVVANTG 149 (302)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhC---hhheeEEEEeCCC
Confidence 2 2344433344344456788999999999999999999999 9999999999874
No 5
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.75 E-value=1.4e-17 Score=152.89 Aligned_cols=110 Identities=10% Similarity=0.102 Sum_probs=85.5
Q ss_pred CceEEEEeCC-CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC----------cHHHH
Q 022749 83 PVQVAFKTGD-YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ----------DAMEI 151 (292)
Q Consensus 83 ~~~~~y~~g~-~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~----------~v~Dl 151 (292)
+.+++|...+ .+++|||+||++ .+...|..+++.|+++ |+|+ ++|+||||.|+... ..+|+
T Consensus 17 ~~~i~y~~~G~~~~~vlllHG~~---~~~~~w~~~~~~L~~~-~~vi----~~DlpG~G~S~~~~~~~~~~~~~~~~~~~ 88 (294)
T PLN02824 17 GYNIRYQRAGTSGPALVLVHGFG---GNADHWRKNTPVLAKS-HRVY----AIDLLGYGYSDKPNPRSAPPNSFYTFETW 88 (294)
T ss_pred CeEEEEEEcCCCCCeEEEECCCC---CChhHHHHHHHHHHhC-CeEE----EEcCCCCCCCCCCccccccccccCCHHHH
Confidence 4456676533 578999999999 5566788899999974 7999 77889999987532 23444
Q ss_pred HHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 152 DQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 152 ~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
.+.+..+.++++.++++|+||||||.+++.+|.++ |++|+++|+++|..
T Consensus 89 a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~---p~~v~~lili~~~~ 137 (294)
T PLN02824 89 GEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDA---PELVRGVMLINISL 137 (294)
T ss_pred HHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhC---hhheeEEEEECCCc
Confidence 43343334445779999999999999999999999 99999999998754
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.75 E-value=1.5e-17 Score=151.66 Aligned_cols=113 Identities=16% Similarity=0.189 Sum_probs=87.6
Q ss_pred CCCceEEEEe--CC-CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC---cHHHHHHH
Q 022749 81 PKPVQVAFKT--GD-YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ---DAMEIDQL 154 (292)
Q Consensus 81 ~~~~~~~y~~--g~-~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~---~v~Dl~~~ 154 (292)
.++.+++|.. ++ .+++|||+||++ .+...|..+++.|.+ +|+|+ ++|+||||.|+.+. ..+++.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~plvllHG~~---~~~~~w~~~~~~L~~-~~~vi----~~Dl~G~G~S~~~~~~~~~~~~~~~ 80 (276)
T TIGR02240 9 LDGQSIRTAVRPGKEGLTPLLIFNGIG---ANLELVFPFIEALDP-DLEVI----AFDVPGVGGSSTPRHPYRFPGLAKL 80 (276)
T ss_pred cCCcEEEEEEecCCCCCCcEEEEeCCC---cchHHHHHHHHHhcc-CceEE----EECCCCCCCCCCCCCcCcHHHHHHH
Confidence 3445566643 23 347999999998 555678889999986 79999 78889999997542 24454444
Q ss_pred HHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 155 ISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 155 i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
++.+.+.++.++++|+||||||.+++.+|.++ |++|+++||+++...
T Consensus 81 ~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~---p~~v~~lvl~~~~~~ 127 (276)
T TIGR02240 81 AARMLDYLDYGQVNAIGVSWGGALAQQFAHDY---PERCKKLILAATAAG 127 (276)
T ss_pred HHHHHHHhCcCceEEEEECHHHHHHHHHHHHC---HHHhhheEEeccCCc
Confidence 44445555788999999999999999999999 899999999998754
No 7
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.75 E-value=2.3e-17 Score=151.57 Aligned_cols=111 Identities=14% Similarity=0.191 Sum_probs=87.5
Q ss_pred CCceEEEEeCCCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC---cHHHHHHHHHHH
Q 022749 82 KPVQVAFKTGDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ---DAMEIDQLISYL 158 (292)
Q Consensus 82 ~~~~~~y~~g~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~---~v~Dl~~~i~~l 158 (292)
++.+++|...+.+++|||+||++ .+...|..+++.|.++ |+|| ++|+||||.|+.+. ..++..+.+..+
T Consensus 15 ~g~~i~y~~~G~g~~vvllHG~~---~~~~~w~~~~~~L~~~-~~vi----a~D~~G~G~S~~~~~~~~~~~~a~dl~~l 86 (295)
T PRK03592 15 LGSRMAYIETGEGDPIVFLHGNP---TSSYLWRNIIPHLAGL-GRCL----APDLIGMGASDKPDIDYTFADHARYLDAW 86 (295)
T ss_pred CCEEEEEEEeCCCCEEEEECCCC---CCHHHHHHHHHHHhhC-CEEE----EEcCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 44567777656678999999998 6667788999999986 5999 77889999997543 233333333333
Q ss_pred HHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 159 INKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 159 ~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
.++++.++++|+||||||.+++.++.++ |++|+++|++++..
T Consensus 87 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~---p~~v~~lil~~~~~ 128 (295)
T PRK03592 87 FDALGLDDVVLVGHDWGSALGFDWAARH---PDRVRGIAFMEAIV 128 (295)
T ss_pred HHHhCCCCeEEEEECHHHHHHHHHHHhC---hhheeEEEEECCCC
Confidence 3445788999999999999999999999 99999999999744
No 8
>PHA02857 monoglyceride lipase; Provisional
Probab=99.74 E-value=3.6e-17 Score=148.47 Aligned_cols=103 Identities=19% Similarity=0.162 Sum_probs=81.7
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC--------cHHHHHHHHHHHHHhcC
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ--------DAMEIDQLISYLINKDN 163 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~--------~v~Dl~~~i~~l~~~~~ 163 (292)
+.++.|+++||++ .+..+|..+++.|.++||+|+ ++|+||||.|.... .++|+.++++.+++..+
T Consensus 23 ~~~~~v~llHG~~---~~~~~~~~~~~~l~~~g~~vi----a~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~ 95 (276)
T PHA02857 23 YPKALVFISHGAG---EHSGRYEELAENISSLGILVF----SHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYP 95 (276)
T ss_pred CCCEEEEEeCCCc---cccchHHHHHHHHHhCCCEEE----EccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCC
Confidence 3456677779998 445678889999998899999 88889999986421 13455555555554455
Q ss_pred CCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 164 SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 164 ~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
..+++|+||||||.+++.+|.++ |++|+++||++|...
T Consensus 96 ~~~~~lvG~S~GG~ia~~~a~~~---p~~i~~lil~~p~~~ 133 (276)
T PHA02857 96 GVPVFLLGHSMGATISILAAYKN---PNLFTAMILMSPLVN 133 (276)
T ss_pred CCCEEEEEcCchHHHHHHHHHhC---ccccceEEEeccccc
Confidence 67899999999999999999998 889999999999755
No 9
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.73 E-value=3.5e-17 Score=153.14 Aligned_cols=115 Identities=15% Similarity=0.177 Sum_probs=88.3
Q ss_pred CCCceEEEEe---C---CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCC-C-------
Q 022749 81 PKPVQVAFKT---G---DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ-Q------- 146 (292)
Q Consensus 81 ~~~~~~~y~~---g---~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~-~------- 146 (292)
.++.+++|.. . +.+++|||+||++.+. ..++..+++.|.++||+|+ ++|+||||.|... .
T Consensus 40 ~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~--~~~~~~~~~~L~~~Gy~V~----~~D~rGhG~S~~~~~~~~~~~~ 113 (330)
T PLN02298 40 PRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDI--SWTFQSTAIFLAQMGFACF----ALDLEGHGRSEGLRAYVPNVDL 113 (330)
T ss_pred CCCCEEEEEEEecCCCCCCceEEEEEcCCCCCc--ceehhHHHHHHHhCCCEEE----EecCCCCCCCCCccccCCCHHH
Confidence 4566666642 1 2356799999998532 2345677888988899999 8888999998631 1
Q ss_pred cHHHHHHHHHHHHHh--cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 147 DAMEIDQLISYLINK--DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 147 ~v~Dl~~~i~~l~~~--~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
.++|+.+++++++.. ....+++|+||||||.+++.++.++ |++|+++||++|...
T Consensus 114 ~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~---p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 114 VVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLAN---PEGFDGAVLVAPMCK 170 (330)
T ss_pred HHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcC---cccceeEEEeccccc
Confidence 257788888888643 2345899999999999999999988 889999999999754
No 10
>PRK10749 lysophospholipase L2; Provisional
Probab=99.73 E-value=3.6e-17 Score=153.93 Aligned_cols=114 Identities=15% Similarity=0.157 Sum_probs=88.2
Q ss_pred CCCceEEEEe-C--CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCC------------
Q 022749 81 PKPVQVAFKT-G--DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ------------ 145 (292)
Q Consensus 81 ~~~~~~~y~~-g--~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~------------ 145 (292)
.++.+++|.. + +.+++||++||+++ ....|..++..|.++||+|+ ++|+||||.|+..
T Consensus 38 ~~g~~l~~~~~~~~~~~~~vll~HG~~~---~~~~y~~~~~~l~~~g~~v~----~~D~~G~G~S~~~~~~~~~~~~~~~ 110 (330)
T PRK10749 38 VDDIPIRFVRFRAPHHDRVVVICPGRIE---SYVKYAELAYDLFHLGYDVL----IIDHRGQGRSGRLLDDPHRGHVERF 110 (330)
T ss_pred CCCCEEEEEEccCCCCCcEEEEECCccc---hHHHHHHHHHHHHHCCCeEE----EEcCCCCCCCCCCCCCCCcCccccH
Confidence 4556777765 2 34678999999984 34445678888888899999 7888999998632
Q ss_pred -CcHHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 146 -QDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 146 -~~v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
..++|+.++++.+....+..+++|+||||||.+++.||.++ |++|+++||++|...
T Consensus 111 ~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~---p~~v~~lvl~~p~~~ 167 (330)
T PRK10749 111 NDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRH---PGVFDAIALCAPMFG 167 (330)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhC---CCCcceEEEECchhc
Confidence 11356666666654444678999999999999999999998 899999999999753
No 11
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.72 E-value=1.1e-16 Score=147.74 Aligned_cols=118 Identities=14% Similarity=0.190 Sum_probs=94.3
Q ss_pred ceEEEEeCCCCceEEEEeCCCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC----cH
Q 022749 73 RGVLFKYGPKPVQVAFKTGDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ----DA 148 (292)
Q Consensus 73 ~g~l~~y~~~~~~~~y~~g~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~----~v 148 (292)
....+.. ++.+++|...+.+++|||+||++ .....|..+++.|.+ +|+|+ ++|+||||.|+.+. ..
T Consensus 15 ~~~~~~~--~~~~i~y~~~G~~~~iv~lHG~~---~~~~~~~~~~~~l~~-~~~vi----~~D~~G~G~S~~~~~~~~~~ 84 (286)
T PRK03204 15 ESRWFDS--SRGRIHYIDEGTGPPILLCHGNP---TWSFLYRDIIVALRD-RFRCV----APDYLGFGLSERPSGFGYQI 84 (286)
T ss_pred cceEEEc--CCcEEEEEECCCCCEEEEECCCC---ccHHHHHHHHHHHhC-CcEEE----EECCCCCCCCCCCCccccCH
Confidence 3444554 34567887766678999999998 445567888999985 79999 77889999987532 35
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 149 MEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 149 ~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
+++.+.+..+.++++.++++|+||||||.+++.++.++ |++|+++|++++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~---p~~v~~lvl~~~~~ 136 (286)
T PRK03204 85 DEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVER---ADRVRGVVLGNTWF 136 (286)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhC---hhheeEEEEECccc
Confidence 67777777777777889999999999999999999998 99999999987753
No 12
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.72 E-value=8.3e-17 Score=153.51 Aligned_cols=108 Identities=16% Similarity=0.206 Sum_probs=83.7
Q ss_pred eEEEEeCCC------CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC----cHHHHHHH
Q 022749 85 QVAFKTGDY------QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ----DAMEIDQL 154 (292)
Q Consensus 85 ~~~y~~g~~------~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~----~v~Dl~~~ 154 (292)
+++|...+. +++|||+||++ .+...|..+++.|.+ +|+|+ ++|+||||.|+.+. ..+++.+.
T Consensus 73 ~i~Y~~~G~g~~~~~gp~lvllHG~~---~~~~~w~~~~~~L~~-~~~vi----a~Dl~G~G~S~~~~~~~~~~~~~a~~ 144 (360)
T PLN02679 73 SINYLVKGSPEVTSSGPPVLLVHGFG---ASIPHWRRNIGVLAK-NYTVY----AIDLLGFGASDKPPGFSYTMETWAEL 144 (360)
T ss_pred eEEEEEecCcccCCCCCeEEEECCCC---CCHHHHHHHHHHHhc-CCEEE----EECCCCCCCCCCCCCccccHHHHHHH
Confidence 678875443 48999999999 556678889999986 79999 77889999997542 23444333
Q ss_pred HHHHHHhcCCCcEEEEEeChHHHHHHHHHHH-hccCccccceEEEeCCCC
Q 022749 155 ISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 155 i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~-~~~~p~~V~glIL~aP~~ 203 (292)
+..+.++++.++++|+||||||.+++.++.. + |++|+++||++|..
T Consensus 145 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~---P~rV~~LVLi~~~~ 191 (360)
T PLN02679 145 ILDFLEEVVQKPTVLIGNSVGSLACVIAASEST---RDLVRGLVLLNCAG 191 (360)
T ss_pred HHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcC---hhhcCEEEEECCcc
Confidence 3333445578899999999999999998874 6 88999999998753
No 13
>PLN02965 Probable pheophorbidase
Probab=99.72 E-value=5.1e-17 Score=146.60 Aligned_cols=98 Identities=20% Similarity=0.281 Sum_probs=77.6
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC----cHHHHHHHHHHHHHhcCC-CcEEE
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ----DAMEIDQLISYLINKDNS-EGVVL 169 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~----~v~Dl~~~i~~l~~~~~~-~~vvL 169 (292)
.+|||+||++ .+...|..+++.|++.||+|+ ++|+||||.|.... ..+++.+.+..+.++++. ++++|
T Consensus 4 ~~vvllHG~~---~~~~~w~~~~~~L~~~~~~vi----a~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~l 76 (255)
T PLN02965 4 IHFVFVHGAS---HGAWCWYKLATLLDAAGFKST----CVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVIL 76 (255)
T ss_pred eEEEEECCCC---CCcCcHHHHHHHHhhCCceEE----EecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 3599999999 566778899999977799999 77889999996432 234443333333344455 59999
Q ss_pred EEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 170 LGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 170 vGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
+||||||.+++.++.++ |++|+++|++++.
T Consensus 77 vGhSmGG~ia~~~a~~~---p~~v~~lvl~~~~ 106 (255)
T PLN02965 77 VGHSIGGGSVTEALCKF---TDKISMAIYVAAA 106 (255)
T ss_pred EecCcchHHHHHHHHhC---chheeEEEEEccc
Confidence 99999999999999999 9999999999875
No 14
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.71 E-value=8.9e-17 Score=145.53 Aligned_cols=109 Identities=15% Similarity=0.224 Sum_probs=80.2
Q ss_pred CceEEEEeCCCCceEEEECCCCCCCCCh-hhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC--------cHHHHHH
Q 022749 83 PVQVAFKTGDYQQQVIFIGGLTDGFFAT-EYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ--------DAMEIDQ 153 (292)
Q Consensus 83 ~~~~~y~~g~~~~~VV~vHG~~~g~~s~-~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~--------~v~Dl~~ 153 (292)
+..++|...+.+++|||+||++.+...+ .++ ..+..|.+.||+|+ ++|+||||.|+... .++|+.+
T Consensus 19 ~~~~~y~~~g~~~~ivllHG~~~~~~~~~~~~-~~~~~l~~~~~~vi----~~D~~G~G~S~~~~~~~~~~~~~~~~l~~ 93 (282)
T TIGR03343 19 NFRIHYNEAGNGEAVIMLHGGGPGAGGWSNYY-RNIGPFVDAGYRVI----LKDSPGFNKSDAVVMDEQRGLVNARAVKG 93 (282)
T ss_pred ceeEEEEecCCCCeEEEECCCCCchhhHHHHH-HHHHHHHhCCCEEE----EECCCCCCCCCCCcCcccccchhHHHHHH
Confidence 3457777655678999999998432222 223 33455656699999 77889999997431 1234444
Q ss_pred HHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 154 LISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 154 ~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
+++ .++.++++++||||||.+++.++.++ |++|+++|+++|..
T Consensus 94 ~l~----~l~~~~~~lvG~S~Gg~ia~~~a~~~---p~~v~~lvl~~~~~ 136 (282)
T TIGR03343 94 LMD----ALDIEKAHLVGNSMGGATALNFALEY---PDRIGKLILMGPGG 136 (282)
T ss_pred HHH----HcCCCCeeEEEECchHHHHHHHHHhC---hHhhceEEEECCCC
Confidence 433 34788999999999999999999999 99999999998853
No 15
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.71 E-value=6.9e-17 Score=152.87 Aligned_cols=115 Identities=20% Similarity=0.248 Sum_probs=86.0
Q ss_pred CCCceEEEEe-C----CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC----c----
Q 022749 81 PKPVQVAFKT-G----DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ----D---- 147 (292)
Q Consensus 81 ~~~~~~~y~~-g----~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~----~---- 147 (292)
.++++++|.. + +.+++|||+||++++ ...+|..+++.|+++||+|+ ++|+||||.|+... .
T Consensus 69 ~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~--~~~~~~~~~~~l~~~g~~v~----~~D~~G~G~S~~~~~~~~~~~~~ 142 (349)
T PLN02385 69 SRGVEIFSKSWLPENSRPKAAVCFCHGYGDT--CTFFFEGIARKIASSGYGVF----AMDYPGFGLSEGLHGYIPSFDDL 142 (349)
T ss_pred CCCCEEEEEEEecCCCCCCeEEEEECCCCCc--cchHHHHHHHHHHhCCCEEE----EecCCCCCCCCCCCCCcCCHHHH
Confidence 4566666543 1 246789999999842 23456788999998899999 88889999987421 2
Q ss_pred HHHHHHHHHHHHHh--cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 148 AMEIDQLISYLINK--DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 148 v~Dl~~~i~~l~~~--~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
++|+.++++.+..+ .+..+++|+||||||.+++.++.++ |++|+++||++|...
T Consensus 143 ~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~---p~~v~glVLi~p~~~ 198 (349)
T PLN02385 143 VDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQ---PNAWDGAILVAPMCK 198 (349)
T ss_pred HHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhC---cchhhheeEeccccc
Confidence 44555555555321 2345899999999999999999998 899999999999754
No 16
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.71 E-value=5.8e-17 Score=145.58 Aligned_cols=104 Identities=14% Similarity=0.234 Sum_probs=82.4
Q ss_pred EEEEeCCCC-ceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCC
Q 022749 86 VAFKTGDYQ-QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNS 164 (292)
Q Consensus 86 ~~y~~g~~~-~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~ 164 (292)
++|..-+.+ ++|||+||++ .+...|..+++.|.+ .|+|+ .+|+||||.|..... .+++++++.+.+ ...
T Consensus 4 ~~y~~~G~g~~~ivllHG~~---~~~~~w~~~~~~L~~-~~~vi----~~Dl~G~G~S~~~~~-~~~~~~~~~l~~-~~~ 73 (256)
T PRK10349 4 IWWQTKGQGNVHLVLLHGWG---LNAEVWRCIDEELSS-HFTLH----LVDLPGFGRSRGFGA-LSLADMAEAVLQ-QAP 73 (256)
T ss_pred cchhhcCCCCCeEEEECCCC---CChhHHHHHHHHHhc-CCEEE----EecCCCCCCCCCCCC-CCHHHHHHHHHh-cCC
Confidence 445443344 5799999998 667788999999986 69999 778899999875432 345556666554 367
Q ss_pred CcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 165 EGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 165 ~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
++++|+||||||.+++.+|.++ |++|+++|++++.
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~~~---p~~v~~lili~~~ 108 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIALTH---PERVQALVTVASS 108 (256)
T ss_pred CCeEEEEECHHHHHHHHHHHhC---hHhhheEEEecCc
Confidence 8999999999999999999998 9999999999874
No 17
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.70 E-value=1.6e-16 Score=146.05 Aligned_cols=111 Identities=15% Similarity=0.233 Sum_probs=82.1
Q ss_pred CceEEEEeC-CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCC----CcHHHHH-HHHH
Q 022749 83 PVQVAFKTG-DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ----QDAMEID-QLIS 156 (292)
Q Consensus 83 ~~~~~y~~g-~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~----~~v~Dl~-~~i~ 156 (292)
+.++.|... +.+|+|||+||++ .+...|..+++.|++.||+|+ ++|+||||.+... ...++.. .+++
T Consensus 6 ~~~~~~~~~~~~~p~vvliHG~~---~~~~~w~~~~~~L~~~g~~vi----~~dl~g~G~s~~~~~~~~~~~~~~~~l~~ 78 (273)
T PLN02211 6 GEEVTDMKPNRQPPHFVLIHGIS---GGSWCWYKIRCLMENSGYKVT----CIDLKSAGIDQSDADSVTTFDEYNKPLID 78 (273)
T ss_pred ccccccccccCCCCeEEEECCCC---CCcCcHHHHHHHHHhCCCEEE----EecccCCCCCCCCcccCCCHHHHHHHHHH
Confidence 344445433 5678999999998 455668899999988899999 7788999986422 2333333 3333
Q ss_pred HHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 157 YLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 157 ~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
.+.+..+.++++|+||||||.+++.++.++ |++|+++|++++..
T Consensus 79 ~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~---p~~v~~lv~~~~~~ 122 (273)
T PLN02211 79 FLSSLPENEKVILVGHSAGGLSVTQAIHRF---PKKICLAVYVAATM 122 (273)
T ss_pred HHHhcCCCCCEEEEEECchHHHHHHHHHhC---hhheeEEEEecccc
Confidence 333221357999999999999999999988 89999999998753
No 18
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.69 E-value=2.2e-16 Score=134.45 Aligned_cols=99 Identities=21% Similarity=0.327 Sum_probs=78.1
Q ss_pred EEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC-----cHHHHHHHHHHHHHhcCCCcEEEEE
Q 022749 97 VIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ-----DAMEIDQLISYLINKDNSEGVVLLG 171 (292)
Q Consensus 97 VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~-----~v~Dl~~~i~~l~~~~~~~~vvLvG 171 (292)
|||+||++ .+..+|..+++.|+ +||+|+ ++|+||||.|.... ..++..+.+..+.++.+.++++|+|
T Consensus 1 vv~~hG~~---~~~~~~~~~~~~l~-~~~~v~----~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG 72 (228)
T PF12697_consen 1 VVFLHGFG---GSSESWDPLAEALA-RGYRVI----AFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVG 72 (228)
T ss_dssp EEEE-STT---TTGGGGHHHHHHHH-TTSEEE----EEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEE
T ss_pred eEEECCCC---CCHHHHHHHHHHHh-CCCEEE----EEecCCccccccccccCCcchhhhhhhhhhcccccccccccccc
Confidence 79999999 55677888999996 699999 77889999997532 2333333333334445678999999
Q ss_pred eChHHHHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 172 HSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 172 HSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
||+||.+++.++.++ |++|+++|+++|.....
T Consensus 73 ~S~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 73 HSMGGMIALRLAARY---PDRVKGLVLLSPPPPLP 104 (228)
T ss_dssp ETHHHHHHHHHHHHS---GGGEEEEEEESESSSHH
T ss_pred ccccccccccccccc---ccccccceeeccccccc
Confidence 999999999999998 89999999999988643
No 19
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.69 E-value=4.4e-16 Score=139.53 Aligned_cols=112 Identities=13% Similarity=0.125 Sum_probs=86.0
Q ss_pred CCceEEEEeCC--CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC----cHHHHHHHH
Q 022749 82 KPVQVAFKTGD--YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ----DAMEIDQLI 155 (292)
Q Consensus 82 ~~~~~~y~~g~--~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~----~v~Dl~~~i 155 (292)
++.+++|...+ .+++|||+||++ .+...|..+++.|++ +|+|+ ++|+||||.|+.+. ..+++.+.+
T Consensus 14 ~~~~~~~~~~g~~~~~~vv~~hG~~---~~~~~~~~~~~~l~~-~~~vi----~~D~~G~G~S~~~~~~~~~~~~~~~~l 85 (278)
T TIGR03056 14 GPFHWHVQDMGPTAGPLLLLLHGTG---ASTHSWRDLMPPLAR-SFRVV----APDLPGHGFTRAPFRFRFTLPSMAEDL 85 (278)
T ss_pred CCEEEEEEecCCCCCCeEEEEcCCC---CCHHHHHHHHHHHhh-CcEEE----eecCCCCCCCCCccccCCCHHHHHHHH
Confidence 44456665433 468999999998 556677889999986 79999 78889999987432 344444444
Q ss_pred HHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 156 SYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 156 ~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
..+.++.+.++++|+||||||.+++.++.++ |++++++|++++...
T Consensus 86 ~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~---p~~v~~~v~~~~~~~ 131 (278)
T TIGR03056 86 SALCAAEGLSPDGVIGHSAGAAIALRLALDG---PVTPRMVVGINAALM 131 (278)
T ss_pred HHHHHHcCCCCceEEEECccHHHHHHHHHhC---CcccceEEEEcCccc
Confidence 4444555778999999999999999999998 889999999987543
No 20
>PLN02578 hydrolase
Probab=99.67 E-value=8.5e-16 Score=146.06 Aligned_cols=109 Identities=17% Similarity=0.210 Sum_probs=84.0
Q ss_pred CCceEEEEeCCCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC---cHHHH-HHHHHH
Q 022749 82 KPVQVAFKTGDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ---DAMEI-DQLISY 157 (292)
Q Consensus 82 ~~~~~~y~~g~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~---~v~Dl-~~~i~~ 157 (292)
++.+++|...+++++|||+||++ .+...|..+++.|++ +|+|+ ++|+||||.|+.+. ..++. ++++++
T Consensus 74 ~~~~i~Y~~~g~g~~vvliHG~~---~~~~~w~~~~~~l~~-~~~v~----~~D~~G~G~S~~~~~~~~~~~~a~~l~~~ 145 (354)
T PLN02578 74 RGHKIHYVVQGEGLPIVLIHGFG---ASAFHWRYNIPELAK-KYKVY----ALDLLGFGWSDKALIEYDAMVWRDQVADF 145 (354)
T ss_pred CCEEEEEEEcCCCCeEEEECCCC---CCHHHHHHHHHHHhc-CCEEE----EECCCCCCCCCCcccccCHHHHHHHHHHH
Confidence 45678887766778999999998 455668888899985 79999 77889999997543 22221 223333
Q ss_pred HHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 158 LINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 158 l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
+ ++...++++|+||||||.+++.+|.++ |++|+++||+++.
T Consensus 146 i-~~~~~~~~~lvG~S~Gg~ia~~~A~~~---p~~v~~lvLv~~~ 186 (354)
T PLN02578 146 V-KEVVKEPAVLVGNSLGGFTALSTAVGY---PELVAGVALLNSA 186 (354)
T ss_pred H-HHhccCCeEEEEECHHHHHHHHHHHhC---hHhcceEEEECCC
Confidence 3 223568999999999999999999999 9999999999764
No 21
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.67 E-value=1.6e-15 Score=139.87 Aligned_cols=105 Identities=14% Similarity=0.180 Sum_probs=85.9
Q ss_pred CceEEEECCCCCCCCC-hhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCC-------CcHHHHHHHHHHHHHhcCCC
Q 022749 94 QQQVIFIGGLTDGFFA-TEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ-------QDAMEIDQLISYLINKDNSE 165 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s-~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~-------~~v~Dl~~~i~~l~~~~~~~ 165 (292)
+++|||+||+++.... .+.|..+++.|+++||+|+ ++|+||||.|... ..++|+.++++++++. +..
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl----~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~~~ 99 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVL----QIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ-GHP 99 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEE----EECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc-CCC
Confidence 5789999999854322 3457778999999999999 8888999998532 1257888888888654 678
Q ss_pred cEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 166 GVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 166 ~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
+++|+||||||.+++.++.++ +++|+++||++|+....
T Consensus 100 ~v~LvG~SmGG~vAl~~A~~~---p~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 100 PVTLWGLRLGALLALDAANPL---AAKCNRLVLWQPVVSGK 137 (266)
T ss_pred CEEEEEECHHHHHHHHHHHhC---ccccceEEEeccccchH
Confidence 999999999999999999998 88999999999976543
No 22
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.67 E-value=1.4e-15 Score=147.43 Aligned_cols=123 Identities=15% Similarity=0.272 Sum_probs=92.6
Q ss_pred eEEEEeCCCCceEEEEe-----CCCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC--
Q 022749 74 GVLFKYGPKPVQVAFKT-----GDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ-- 146 (292)
Q Consensus 74 g~l~~y~~~~~~~~y~~-----g~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~-- 146 (292)
.+++.|.+++..++|.. ++.+++|||+||+++ ....|..+++.|.++||+|+ ++|+||||.|+...
T Consensus 111 ~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~---~~~~~~~~a~~L~~~Gy~V~----~~D~rGhG~S~~~~~~ 183 (395)
T PLN02652 111 ATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNE---HSGRYLHFAKQLTSCGFGVY----AMDWIGHGGSDGLHGY 183 (395)
T ss_pred EEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchH---HHHHHHHHHHHHHHCCCEEE----EeCCCCCCCCCCCCCC
Confidence 34666666665655432 234578999999984 34446789999998999999 88889999987431
Q ss_pred ------cHHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 147 ------DAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 147 ------~v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
.++|+.++++++..+.+..+++|+||||||.+++.++. ++..+++|+++|+.+|...
T Consensus 184 ~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 184 VPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALR 246 (395)
T ss_pred CcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccc
Confidence 25788888888876555568999999999999998765 4222358999999999754
No 23
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.67 E-value=7.4e-16 Score=136.47 Aligned_cols=98 Identities=18% Similarity=0.203 Sum_probs=76.2
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC--cHHHHHHHHHHHHHhcCCCcEEEEE
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ--DAMEIDQLISYLINKDNSEGVVLLG 171 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~--~v~Dl~~~i~~l~~~~~~~~vvLvG 171 (292)
+|+|||+||++ .+...|..+++.|+ +|+|+ ++|+||||.|+.+. ..+++.+.+..+.++.+.++++|+|
T Consensus 2 ~p~vvllHG~~---~~~~~w~~~~~~l~--~~~vi----~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG 72 (242)
T PRK11126 2 LPWLVFLHGLL---GSGQDWQPVGEALP--DYPRL----YIDLPGHGGSAAISVDGFADVSRLLSQTLQSYNILPYWLVG 72 (242)
T ss_pred CCEEEEECCCC---CChHHHHHHHHHcC--CCCEE----EecCCCCCCCCCccccCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 57899999998 56677888999884 69999 77889999987532 2333333333334445789999999
Q ss_pred eChHHHHHHHHHHHhccCcc-ccceEEEeCCCC
Q 022749 172 HSTGCQDIVHYMRANAACSR-AVRAAIFQAPVS 203 (292)
Q Consensus 172 HSmGG~ial~ya~~~~~~p~-~V~glIL~aP~~ 203 (292)
|||||.+++.+|.++ ++ +|+++|++++..
T Consensus 73 ~S~Gg~va~~~a~~~---~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 73 YSLGGRIAMYYACQG---LAGGLCGLIVEGGNP 102 (242)
T ss_pred ECHHHHHHHHHHHhC---CcccccEEEEeCCCC
Confidence 999999999999998 55 499999988654
No 24
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.66 E-value=6.7e-16 Score=135.54 Aligned_cols=102 Identities=19% Similarity=0.190 Sum_probs=78.8
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC----cHHHHHHHHHHHHHhcCCCcEE
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ----DAMEIDQLISYLINKDNSEGVV 168 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~----~v~Dl~~~i~~l~~~~~~~~vv 168 (292)
.+++|||+||++ .+..+|..+++.|.+ +|+|+ ++|+||||.|..+. ..+|..+.+..+.++.+.++++
T Consensus 12 ~~~~iv~lhG~~---~~~~~~~~~~~~l~~-~~~vi----~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 83 (257)
T TIGR03611 12 DAPVVVLSSGLG---GSGSYWAPQLDVLTQ-RFHVV----TYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIERFH 83 (257)
T ss_pred CCCEEEEEcCCC---cchhHHHHHHHHHHh-ccEEE----EEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCCcEE
Confidence 478999999998 556778888888885 79999 78889999986432 2333322222223344678999
Q ss_pred EEEeChHHHHHHHHHHHhccCccccceEEEeCCCCCh
Q 022749 169 LLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 169 LvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~ 205 (292)
|+||||||.+++.++.++ +++|+++|++++....
T Consensus 84 l~G~S~Gg~~a~~~a~~~---~~~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 84 FVGHALGGLIGLQLALRY---PERLLSLVLINAWSRP 117 (257)
T ss_pred EEEechhHHHHHHHHHHC---hHHhHHheeecCCCCC
Confidence 999999999999999998 8899999999886543
No 25
>PRK06489 hypothetical protein; Provisional
Probab=99.66 E-value=7.4e-16 Score=146.67 Aligned_cols=111 Identities=15% Similarity=0.155 Sum_probs=81.0
Q ss_pred CCceEEEEeCCC---------CceEEEECCCCCCCCChhhHH--HHHHHH-------hhCCcEEEEecccccCCCCCCCC
Q 022749 82 KPVQVAFKTGDY---------QQQVIFIGGLTDGFFATEYLE--PLAIAL-------DKERWSLVQFLMTSSYTGYGTSS 143 (292)
Q Consensus 82 ~~~~~~y~~g~~---------~~~VV~vHG~~~g~~s~~~~~--~la~~L-------~~~Gy~Vi~~~l~~D~~G~G~S~ 143 (292)
++.+++|...+. +++|||+||++. +...|. .+.+.| ..++|+|| ++|+||||.|+
T Consensus 48 ~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~---~~~~~~~~~~~~~l~~~~~~l~~~~~~Vi----a~Dl~GhG~S~ 120 (360)
T PRK06489 48 PELRLHYTTLGTPHRNADGEIDNAVLVLHGTGG---SGKSFLSPTFAGELFGPGQPLDASKYFII----LPDGIGHGKSS 120 (360)
T ss_pred CCceEEEEecCCCCcccccCCCCeEEEeCCCCC---chhhhccchhHHHhcCCCCcccccCCEEE----EeCCCCCCCCC
Confidence 356788876433 689999999984 333332 455544 12479999 77889999987
Q ss_pred CCC----------cHHHHH-HHHHHHHHhcCCCcEE-EEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 144 LQQ----------DAMEID-QLISYLINKDNSEGVV-LLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 144 ~~~----------~v~Dl~-~~i~~l~~~~~~~~vv-LvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
.+. ..+++. ++++.+.++++.++++ |+||||||.+++.+|.++ |++|+++|++++.
T Consensus 121 ~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~---P~~V~~LVLi~s~ 188 (360)
T PRK06489 121 KPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKY---PDFMDALMPMASQ 188 (360)
T ss_pred CCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhC---chhhheeeeeccC
Confidence 532 234443 3334455667888885 899999999999999999 9999999999875
No 26
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.66 E-value=1.4e-15 Score=135.50 Aligned_cols=98 Identities=14% Similarity=0.153 Sum_probs=75.5
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCc--HHHHHHHHHHHHHhcCCCcEEEE
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQD--AMEIDQLISYLINKDNSEGVVLL 170 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~--v~Dl~~~i~~l~~~~~~~~vvLv 170 (292)
.+++|||+||++ .+...|..++..|.+ +|+|+ ++|+||||.|..... .+++.+.+..+.++++.++++|+
T Consensus 15 ~~~~iv~lhG~~---~~~~~~~~~~~~l~~-~~~vi----~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l~~~~~~lv 86 (255)
T PRK10673 15 NNSPIVLVHGLF---GSLDNLGVLARDLVN-DHDII----QVDMRNHGLSPRDPVMNYPAMAQDLLDTLDALQIEKATFI 86 (255)
T ss_pred CCCCEEEECCCC---CchhHHHHHHHHHhh-CCeEE----EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceEEE
Confidence 578999999998 445567788999985 79999 778899999875332 23322222222333477889999
Q ss_pred EeChHHHHHHHHHHHhccCccccceEEEeCC
Q 022749 171 GHSTGCQDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 171 GHSmGG~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
||||||.+++.+|.++ |++|+++|++++
T Consensus 87 GhS~Gg~va~~~a~~~---~~~v~~lvli~~ 114 (255)
T PRK10673 87 GHSMGGKAVMALTALA---PDRIDKLVAIDI 114 (255)
T ss_pred EECHHHHHHHHHHHhC---HhhcceEEEEec
Confidence 9999999999999998 899999999854
No 27
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.66 E-value=5.6e-16 Score=134.24 Aligned_cols=97 Identities=19% Similarity=0.245 Sum_probs=78.9
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEEeC
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHS 173 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGHS 173 (292)
.++|||+||++ .+...|..+++.|.+ +|+|+ ++|+||||.|..... .+++++++.+.+.. .++++|+|||
T Consensus 4 ~~~iv~~HG~~---~~~~~~~~~~~~l~~-~~~vi----~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~-~~~~~lvG~S 73 (245)
T TIGR01738 4 NVHLVLIHGWG---MNAEVFRCLDEELSA-HFTLH----LVDLPGHGRSRGFGP-LSLADAAEAIAAQA-PDPAIWLGWS 73 (245)
T ss_pred CceEEEEcCCC---CchhhHHHHHHhhcc-CeEEE----EecCCcCccCCCCCC-cCHHHHHHHHHHhC-CCCeEEEEEc
Confidence 47899999998 566778889999985 79999 788899999864332 35566666665443 4799999999
Q ss_pred hHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 174 TGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 174 mGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
|||.+++.++.++ |++|+++|++++..
T Consensus 74 ~Gg~~a~~~a~~~---p~~v~~~il~~~~~ 100 (245)
T TIGR01738 74 LGGLVALHIAATH---PDRVRALVTVASSP 100 (245)
T ss_pred HHHHHHHHHHHHC---HHhhheeeEecCCc
Confidence 9999999999998 89999999997753
No 28
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.65 E-value=2.7e-15 Score=133.27 Aligned_cols=103 Identities=19% Similarity=0.223 Sum_probs=80.3
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC------cHHHHHHHHHHHHHhcCCCc
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ------DAMEIDQLISYLINKDNSEG 166 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~------~v~Dl~~~i~~l~~~~~~~~ 166 (292)
.+++|||+||+.. ....+|..+...|.+.||+|+ ++|+||||.|.... ..+++.+.+..+.++.+.++
T Consensus 24 ~~~~vl~~hG~~g--~~~~~~~~~~~~l~~~g~~vi----~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (288)
T TIGR01250 24 EKIKLLLLHGGPG--MSHEYLENLRELLKEEGREVI----MYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGLDK 97 (288)
T ss_pred CCCeEEEEcCCCC--ccHHHHHHHHHHHHhcCCEEE----EEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCc
Confidence 3689999999763 334567777777776699999 77889999987532 24444444455555667788
Q ss_pred EEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 167 VVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 167 vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
++|+||||||.+++.++.++ |++|+++|++++...
T Consensus 98 ~~liG~S~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 98 FYLLGHSWGGMLAQEYALKY---GQHLKGLIISSMLDS 132 (288)
T ss_pred EEEEEeehHHHHHHHHHHhC---ccccceeeEeccccc
Confidence 99999999999999999998 899999999987643
No 29
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.65 E-value=7.3e-16 Score=133.72 Aligned_cols=100 Identities=18% Similarity=0.212 Sum_probs=78.4
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC---cHHHHHHHHHHHHHhcCCCcEEE
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ---DAMEIDQLISYLINKDNSEGVVL 169 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~---~v~Dl~~~i~~l~~~~~~~~vvL 169 (292)
.+++|||+||++ .+...|..+++.|.+ ||+|+ ++|+||||.|.... ..+++.+.+..+.+..+.++++|
T Consensus 12 ~~~~li~~hg~~---~~~~~~~~~~~~l~~-~~~v~----~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~v~l 83 (251)
T TIGR02427 12 GAPVLVFINSLG---TDLRMWDPVLPALTP-DFRVL----RYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIERAVF 83 (251)
T ss_pred CCCeEEEEcCcc---cchhhHHHHHHHhhc-ccEEE----EecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceEE
Confidence 468899999998 455667888898974 89999 88889999986432 23444333333344456789999
Q ss_pred EEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 170 LGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 170 vGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
+||||||.+++.+|.++ |++|+++|++++..
T Consensus 84 iG~S~Gg~~a~~~a~~~---p~~v~~li~~~~~~ 114 (251)
T TIGR02427 84 CGLSLGGLIAQGLAARR---PDRVRALVLSNTAA 114 (251)
T ss_pred EEeCchHHHHHHHHHHC---HHHhHHHhhccCcc
Confidence 99999999999999998 89999999998754
No 30
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.65 E-value=1.3e-15 Score=131.48 Aligned_cols=99 Identities=16% Similarity=0.268 Sum_probs=79.0
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCc--HHHHHHH----HHHHHHhcCCCcE
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQD--AMEIDQL----ISYLINKDNSEGV 167 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~--v~Dl~~~----i~~l~~~~~~~~v 167 (292)
+++||++||++ .+...|..+++.|+ +||+|+ .+|+||||.|+.+.. ..+++++ +..+.++.+.+++
T Consensus 1 ~~~vv~~hG~~---~~~~~~~~~~~~L~-~~~~v~----~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (251)
T TIGR03695 1 KPVLVFLHGFL---GSGADWQALIELLG-PHFRCL----AIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPF 72 (251)
T ss_pred CCEEEEEcCCC---CchhhHHHHHHHhc-ccCeEE----EEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeE
Confidence 47899999998 55667889999998 699999 778899999875322 2333333 4444555677899
Q ss_pred EEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 168 VLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 168 vLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
+|+||||||.+++.++.++ |+.|+++|++++..
T Consensus 73 ~l~G~S~Gg~ia~~~a~~~---~~~v~~lil~~~~~ 105 (251)
T TIGR03695 73 FLVGYSMGGRIALYYALQY---PERVQGLILESGSP 105 (251)
T ss_pred EEEEeccHHHHHHHHHHhC---chheeeeEEecCCC
Confidence 9999999999999999998 88999999998753
No 31
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.64 E-value=2.6e-15 Score=145.74 Aligned_cols=101 Identities=20% Similarity=0.266 Sum_probs=77.0
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC----cHHHH----HHHHHHHHHhcC
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ----DAMEI----DQLISYLINKDN 163 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~----~v~Dl----~~~i~~l~~~~~ 163 (292)
+.+++|||+||++ .+...|...++.|.+ +|+|+ ++|+||||.|+.+. +.++. .+.+..+++..+
T Consensus 103 ~~~p~vvllHG~~---~~~~~~~~~~~~L~~-~~~vi----~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~ 174 (402)
T PLN02894 103 EDAPTLVMVHGYG---ASQGFFFRNFDALAS-RFRVI----AIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKN 174 (402)
T ss_pred CCCCEEEEECCCC---cchhHHHHHHHHHHh-CCEEE----EECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcC
Confidence 3568999999998 444556667788986 69999 77889999987542 11222 122222234457
Q ss_pred CCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 164 SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 164 ~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
.++++|+||||||.+++.+|.++ |++|+++||++|..
T Consensus 175 ~~~~~lvGhS~GG~la~~~a~~~---p~~v~~lvl~~p~~ 211 (402)
T PLN02894 175 LSNFILLGHSFGGYVAAKYALKH---PEHVQHLILVGPAG 211 (402)
T ss_pred CCCeEEEEECHHHHHHHHHHHhC---chhhcEEEEECCcc
Confidence 88999999999999999999999 99999999999864
No 32
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.64 E-value=1.5e-15 Score=143.60 Aligned_cols=124 Identities=16% Similarity=0.220 Sum_probs=83.0
Q ss_pred eEEEEeC-CCCceEEEEeCC-CCceEEEECCCCCCCCC---------hhhHHHHHH---HHhhCCcEEEEecccccCCCC
Q 022749 74 GVLFKYG-PKPVQVAFKTGD-YQQQVIFIGGLTDGFFA---------TEYLEPLAI---ALDKERWSLVQFLMTSSYTGY 139 (292)
Q Consensus 74 g~l~~y~-~~~~~~~y~~g~-~~~~VV~vHG~~~g~~s---------~~~~~~la~---~L~~~Gy~Vi~~~l~~D~~G~ 139 (292)
+..+.+. .++++++|...+ .++++||+||...+... ..+|.++++ .|...+|+|| ++|+|||
T Consensus 35 ~~~~~~~~~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi----~~Dl~G~ 110 (343)
T PRK08775 35 PLSMRHAGLEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLL----AFDFIGA 110 (343)
T ss_pred ceeecCCCCCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEE----EEeCCCC
Confidence 5566664 457789998643 35456666555422110 015777775 5743479999 7777999
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHhcCCCcE-EEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 140 GTSSLQQ-DAMEIDQLISYLINKDNSEGV-VLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 140 G~S~~~~-~v~Dl~~~i~~l~~~~~~~~v-vLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
|.+.... ..+|..+.+..+.++++.+++ +|+||||||.|++.+|.++ |++|+++||+++...
T Consensus 111 g~s~~~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~---P~~V~~LvLi~s~~~ 174 (343)
T PRK08775 111 DGSLDVPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRH---PARVRTLVVVSGAHR 174 (343)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHC---hHhhheEEEECcccc
Confidence 9774321 233333333333444577665 7999999999999999999 999999999988643
No 33
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.63 E-value=1.1e-15 Score=143.48 Aligned_cols=104 Identities=21% Similarity=0.187 Sum_probs=83.0
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCc-------HHHHHHHHHHHHHhcCC
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQD-------AMEIDQLISYLINKDNS 164 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~-------v~Dl~~~i~~l~~~~~~ 164 (292)
..+.++|+|||++. ....|-.-.+.|++ .++|+ ++|++|+|+|+.+.. ...+.+-++.-+.+.++
T Consensus 88 ~~~~plVliHGyGA---g~g~f~~Nf~~La~-~~~vy----aiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L 159 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGA---GLGLFFRNFDDLAK-IRNVY----AIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGL 159 (365)
T ss_pred cCCCcEEEEeccch---hHHHHHHhhhhhhh-cCceE----EecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCC
Confidence 35789999999994 33445556688886 78999 777799999986532 23344444444667899
Q ss_pred CcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 165 EGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 165 ~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
++.+|+|||+||.++..||.+| |++|+.|||++|+.-++
T Consensus 160 ~KmilvGHSfGGYLaa~YAlKy---PerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 160 EKMILVGHSFGGYLAAKYALKY---PERVEKLILVSPWGFPE 198 (365)
T ss_pred cceeEeeccchHHHHHHHHHhC---hHhhceEEEeccccccc
Confidence 9999999999999999999999 99999999999987555
No 34
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.63 E-value=5.2e-15 Score=142.96 Aligned_cols=112 Identities=18% Similarity=0.215 Sum_probs=88.7
Q ss_pred CCCceEEEEeCC--CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC-------cHHHH
Q 022749 81 PKPVQVAFKTGD--YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ-------DAMEI 151 (292)
Q Consensus 81 ~~~~~~~y~~g~--~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~-------~v~Dl 151 (292)
.++.+++|...+ .+++||||||++ .+...|..+++.|++ +|+|+ ++|+||||.|+.+. ..+++
T Consensus 112 ~~~~~~~y~~~G~~~~~~ivllHG~~---~~~~~w~~~~~~L~~-~~~Vi----a~DlpG~G~S~~p~~~~~~~ys~~~~ 183 (383)
T PLN03084 112 SDLFRWFCVESGSNNNPPVLLIHGFP---SQAYSYRKVLPVLSK-NYHAI----AFDWLGFGFSDKPQPGYGFNYTLDEY 183 (383)
T ss_pred CCceEEEEEecCCCCCCeEEEECCCC---CCHHHHHHHHHHHhc-CCEEE----EECCCCCCCCCCCcccccccCCHHHH
Confidence 455677787543 468999999998 555668889999986 89999 77889999987542 34444
Q ss_pred HHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 152 DQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 152 ~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
.+.+..+.++++.++++|+|||+||.+++.+|.++ |++|+++||++|..
T Consensus 184 a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~---P~~v~~lILi~~~~ 232 (383)
T PLN03084 184 VSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAH---PDKIKKLILLNPPL 232 (383)
T ss_pred HHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhC---hHhhcEEEEECCCC
Confidence 44444444555788999999999999999999999 99999999999864
No 35
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.62 E-value=5.8e-15 Score=146.26 Aligned_cols=118 Identities=17% Similarity=0.266 Sum_probs=86.0
Q ss_pred EEEeC-CCCceEEEEeC-C----CCceEEEECCCCCCCCChhhHHH-HHHHHh---hCCcEEEEecccccCCCCCCCCCC
Q 022749 76 LFKYG-PKPVQVAFKTG-D----YQQQVIFIGGLTDGFFATEYLEP-LAIALD---KERWSLVQFLMTSSYTGYGTSSLQ 145 (292)
Q Consensus 76 l~~y~-~~~~~~~y~~g-~----~~~~VV~vHG~~~g~~s~~~~~~-la~~L~---~~Gy~Vi~~~l~~D~~G~G~S~~~ 145 (292)
-+.|. .++.+++|... + .+++|||+||++ .+..+|.. +.+.|. +.+|+|+ ++|+||||.|+.+
T Consensus 177 ~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~---~s~~~W~~~~~~~L~~~~~~~yrVi----a~Dl~G~G~S~~p 249 (481)
T PLN03087 177 CTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFI---SSSAFWTETLFPNFSDAAKSTYRLF----AVDLLGFGRSPKP 249 (481)
T ss_pred eeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCC---ccHHHHHHHHHHHHHHHhhCCCEEE----EECCCCCCCCcCC
Confidence 34443 35567887653 2 247999999998 45556653 445554 3689999 7788999998754
Q ss_pred C----cHHHHHHHH-HHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 146 Q----DAMEIDQLI-SYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 146 ~----~v~Dl~~~i-~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
. ..++..+.+ ..+.++++.++++|+||||||.+++.+|.++ |++|+++||++|..
T Consensus 250 ~~~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~---Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 250 ADSLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKH---PGAVKSLTLLAPPY 309 (481)
T ss_pred CCCcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhC---hHhccEEEEECCCc
Confidence 2 233433333 2445566889999999999999999999999 99999999998754
No 36
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.61 E-value=2.4e-15 Score=138.96 Aligned_cols=103 Identities=17% Similarity=0.190 Sum_probs=83.7
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC--------CCcHHHHHHHHHHHH--Hhc
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL--------QQDAMEIDQLISYLI--NKD 162 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~--------~~~v~Dl~~~i~~l~--~~~ 162 (292)
.+..|+++||+++ +....+..++..|++.||.|+ +.|++|||.|+. +..++|+....+.++ ++.
T Consensus 53 pr~lv~~~HG~g~--~~s~~~~~~a~~l~~~g~~v~----a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~ 126 (313)
T KOG1455|consen 53 PRGLVFLCHGYGE--HSSWRYQSTAKRLAKSGFAVY----AIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREEN 126 (313)
T ss_pred CceEEEEEcCCcc--cchhhHHHHHHHHHhCCCeEE----EeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhcccc
Confidence 3567899999997 444456689999999999999 889999999973 223566666666654 345
Q ss_pred CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 163 NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 163 ~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
...+.+|+||||||.|++.++.++ |...+|+||+||+..
T Consensus 127 ~~lp~FL~GeSMGGAV~Ll~~~k~---p~~w~G~ilvaPmc~ 165 (313)
T KOG1455|consen 127 KGLPRFLFGESMGGAVALLIALKD---PNFWDGAILVAPMCK 165 (313)
T ss_pred CCCCeeeeecCcchHHHHHHHhhC---Ccccccceeeecccc
Confidence 667999999999999999999987 999999999999764
No 37
>PRK10985 putative hydrolase; Provisional
Probab=99.60 E-value=1e-14 Score=137.07 Aligned_cols=105 Identities=15% Similarity=0.229 Sum_probs=85.4
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC-------CCcHHHHHHHHHHHHHhcCCC
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL-------QQDAMEIDQLISYLINKDNSE 165 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~-------~~~v~Dl~~~i~~l~~~~~~~ 165 (292)
.+++||++||++++. ...|+..+++.|.++||+|+ ++|+||||.+.. ....+|+.+++++++++++..
T Consensus 57 ~~p~vll~HG~~g~~-~~~~~~~~~~~l~~~G~~v~----~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~ 131 (324)
T PRK10985 57 HKPRLVLFHGLEGSF-NSPYAHGLLEAAQKRGWLGV----VMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHV 131 (324)
T ss_pred CCCEEEEeCCCCCCC-cCHHHHHHHHHHHHCCCEEE----EEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCC
Confidence 468999999998543 23566778999999999999 778899986642 134789999999998877888
Q ss_pred cEEEEEeChHHHHHHHHHHHhccCcc--ccceEEEeCCCCCh
Q 022749 166 GVVLLGHSTGCQDIVHYMRANAACSR--AVRAAIFQAPVSDR 205 (292)
Q Consensus 166 ~vvLvGHSmGG~ial~ya~~~~~~p~--~V~glIL~aP~~d~ 205 (292)
+++++||||||.+++.|+.++ ++ +|+++|++++..+.
T Consensus 132 ~~~~vG~S~GG~i~~~~~~~~---~~~~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 132 PTAAVGYSLGGNMLACLLAKE---GDDLPLDAAVIVSAPLML 170 (324)
T ss_pred CEEEEEecchHHHHHHHHHhh---CCCCCccEEEEEcCCCCH
Confidence 999999999999999999887 33 48898888876553
No 38
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.60 E-value=1e-14 Score=136.21 Aligned_cols=113 Identities=15% Similarity=0.263 Sum_probs=90.9
Q ss_pred ceEEEEeCCCCceEEEEeCC--CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCc---
Q 022749 73 RGVLFKYGPKPVQVAFKTGD--YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQD--- 147 (292)
Q Consensus 73 ~g~l~~y~~~~~~~~y~~g~--~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~--- 147 (292)
+.+.++|.. ++++|..++ .+|.|+++||+.+.+++ |+.+...|+.+||+|+ +.|+||+|.|+.+..
T Consensus 23 ~hk~~~~~g--I~~h~~e~g~~~gP~illlHGfPe~wys---wr~q~~~la~~~~rvi----A~DlrGyG~Sd~P~~~~~ 93 (322)
T KOG4178|consen 23 SHKFVTYKG--IRLHYVEGGPGDGPIVLLLHGFPESWYS---WRHQIPGLASRGYRVI----APDLRGYGFSDAPPHISE 93 (322)
T ss_pred ceeeEEEcc--EEEEEEeecCCCCCEEEEEccCCccchh---hhhhhhhhhhcceEEE----ecCCCCCCCCCCCCCcce
Confidence 344555544 888887653 68999999999965444 6677899999999999 777799999987654
Q ss_pred ------HHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCC
Q 022749 148 ------AMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 148 ------v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
+.|+.++++.| +.++++|+||.||+.||..++..+ |++|+|+|+++.
T Consensus 94 Yt~~~l~~di~~lld~L----g~~k~~lvgHDwGaivaw~la~~~---Perv~~lv~~nv 146 (322)
T KOG4178|consen 94 YTIDELVGDIVALLDHL----GLKKAFLVGHDWGAIVAWRLALFY---PERVDGLVTLNV 146 (322)
T ss_pred eeHHHHHHHHHHHHHHh----ccceeEEEeccchhHHHHHHHHhC---hhhcceEEEecC
Confidence 34555555555 799999999999999999999999 999999998754
No 39
>PRK07581 hypothetical protein; Validated
Probab=99.60 E-value=3.9e-15 Score=140.01 Aligned_cols=112 Identities=21% Similarity=0.224 Sum_probs=80.5
Q ss_pred CCceEEEEeCC-----CCceEEEECCCCCCCCChhhHHHHH---HHHhhCCcEEEEecccccCCCCCCCCCCCc------
Q 022749 82 KPVQVAFKTGD-----YQQQVIFIGGLTDGFFATEYLEPLA---IALDKERWSLVQFLMTSSYTGYGTSSLQQD------ 147 (292)
Q Consensus 82 ~~~~~~y~~g~-----~~~~VV~vHG~~~g~~s~~~~~~la---~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~------ 147 (292)
++++++|...+ ..++||++||++. +...|..++ +.|...+|+|| ++|+||||.|+.+..
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~---~~~~~~~~~~~~~~l~~~~~~vi----~~D~~G~G~S~~~~~~~~~~~ 96 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSG---THQDNEWLIGPGRALDPEKYFII----IPNMFGNGLSSSPSNTPAPFN 96 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCC---CcccchhhccCCCccCcCceEEE----EecCCCCCCCCCCCCCCCCCC
Confidence 35667776422 2356777777763 323343332 36765689999 778899999874321
Q ss_pred ---------HHHHHHHHHHHHHhcCCCc-EEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 148 ---------AMEIDQLISYLINKDNSEG-VVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 148 ---------v~Dl~~~i~~l~~~~~~~~-vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
.+|+.+....+.++++.++ ++||||||||++++.+|.+| |++|+++|++++..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~---P~~V~~Lvli~~~~ 159 (339)
T PRK07581 97 AARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRY---PDMVERAAPIAGTA 159 (339)
T ss_pred CCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHC---HHHHhhheeeecCC
Confidence 3566665555666678999 48999999999999999999 99999999997654
No 40
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.60 E-value=8.9e-15 Score=135.95 Aligned_cols=111 Identities=16% Similarity=0.182 Sum_probs=82.0
Q ss_pred CceEEEEeCC--CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC-----cHHHHHHHH
Q 022749 83 PVQVAFKTGD--YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ-----DAMEIDQLI 155 (292)
Q Consensus 83 ~~~~~y~~g~--~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~-----~v~Dl~~~i 155 (292)
+.+++|...+ .+++|||+||+..+ ...+ .+...+...+|+|+ ++|+||||.|.... ..+|+.+.+
T Consensus 14 ~~~l~y~~~g~~~~~~lvllHG~~~~---~~~~-~~~~~~~~~~~~vi----~~D~~G~G~S~~~~~~~~~~~~~~~~dl 85 (306)
T TIGR01249 14 NHQLYYEQSGNPDGKPVVFLHGGPGS---GTDP-GCRRFFDPETYRIV----LFDQRGCGKSTPHACLEENTTWDLVADI 85 (306)
T ss_pred CcEEEEEECcCCCCCEEEEECCCCCC---CCCH-HHHhccCccCCEEE----EECCCCCCCCCCCCCcccCCHHHHHHHH
Confidence 4456665432 36789999997633 2222 33445555689999 77889999987432 245666666
Q ss_pred HHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 156 SYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 156 ~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
..+.++++.++++++||||||.+++.++.++ |++|+++|++++...
T Consensus 86 ~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~---p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 86 EKLREKLGIKNWLVFGGSWGSTLALAYAQTH---PEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHHHHcCCCCEEEEEECHHHHHHHHHHHHC---hHhhhhheeeccccC
Confidence 6666666788999999999999999999999 899999999987643
No 41
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.60 E-value=4.4e-15 Score=140.77 Aligned_cols=115 Identities=22% Similarity=0.290 Sum_probs=83.9
Q ss_pred CceEEEEeCC-----CCceEEEECCCCCCCCChh--------hHHHHH---HHHhhCCcEEEEecccccCCC--CCCCCC
Q 022749 83 PVQVAFKTGD-----YQQQVIFIGGLTDGFFATE--------YLEPLA---IALDKERWSLVQFLMTSSYTG--YGTSSL 144 (292)
Q Consensus 83 ~~~~~y~~g~-----~~~~VV~vHG~~~g~~s~~--------~~~~la---~~L~~~Gy~Vi~~~l~~D~~G--~G~S~~ 144 (292)
+++++|...+ .+++|||+||++++.+..+ +|..++ ..|..++|+|+ ++|+|| ||.+..
T Consensus 15 ~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi----~~D~~G~~~g~s~~ 90 (351)
T TIGR01392 15 DVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVV----CSNVLGGCYGSTGP 90 (351)
T ss_pred CceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEE----EecCCCCCCCCCCC
Confidence 4456665422 3579999999996432222 576664 35655689999 888899 665542
Q ss_pred ---------------CCcHHHHHHHHHHHHHhcCCCc-EEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 145 ---------------QQDAMEIDQLISYLINKDNSEG-VVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 145 ---------------~~~v~Dl~~~i~~l~~~~~~~~-vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
.-.++|+.+.+..+.++++.++ ++|+||||||++++.++.++ |++|+++|++++...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~ 163 (351)
T TIGR01392 91 SSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDY---PERVRAIVVLATSAR 163 (351)
T ss_pred CCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHC---hHhhheEEEEccCCc
Confidence 1235666655555566678888 99999999999999999999 999999999988653
No 42
>PLN02511 hydrolase
Probab=99.59 E-value=1.6e-14 Score=139.49 Aligned_cols=105 Identities=18% Similarity=0.292 Sum_probs=84.1
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCC-------CcHHHHHHHHHHHHHhcCC
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ-------QDAMEIDQLISYLINKDNS 164 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~-------~~v~Dl~~~i~~l~~~~~~ 164 (292)
..+|+||++||++++.. ..|+..++..+.++||+|+ ++|+||||.+... ...+|+.++++++..+++.
T Consensus 98 ~~~p~vvllHG~~g~s~-~~y~~~~~~~~~~~g~~vv----~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~ 172 (388)
T PLN02511 98 ADAPVLILLPGLTGGSD-DSYVRHMLLRARSKGWRVV----VFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPS 172 (388)
T ss_pred CCCCEEEEECCCCCCCC-CHHHHHHHHHHHHCCCEEE----EEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCC
Confidence 34688999999985422 3466667777777899999 7788999988632 4578999999999877777
Q ss_pred CcEEEEEeChHHHHHHHHHHHhccCccc--cceEEEeCCCCC
Q 022749 165 EGVVLLGHSTGCQDIVHYMRANAACSRA--VRAAIFQAPVSD 204 (292)
Q Consensus 165 ~~vvLvGHSmGG~ial~ya~~~~~~p~~--V~glIL~aP~~d 204 (292)
.+++++||||||.+++.|+.++ +++ |+++|++++..+
T Consensus 173 ~~~~lvG~SlGg~i~~~yl~~~---~~~~~v~~~v~is~p~~ 211 (388)
T PLN02511 173 ANLYAAGWSLGANILVNYLGEE---GENCPLSGAVSLCNPFD 211 (388)
T ss_pred CCEEEEEechhHHHHHHHHHhc---CCCCCceEEEEECCCcC
Confidence 7999999999999999999998 655 888887766544
No 43
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.59 E-value=4.5e-15 Score=140.37 Aligned_cols=109 Identities=13% Similarity=0.177 Sum_probs=78.5
Q ss_pred CCCceEEEECCCCCCCCCh--------------------hh---HHHHHHHHhhCCcEEEEecccccCCCCCCCCCC---
Q 022749 92 DYQQQVIFIGGLTDGFFAT--------------------EY---LEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ--- 145 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~--------------------~~---~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~--- 145 (292)
+.+.+||++||++++.... +| ...+++.|.++||+|+ +.|+||||.|...
T Consensus 19 ~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~----~~D~rGHG~S~~~~~~ 94 (332)
T TIGR01607 19 NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVY----GLDLQGHGESDGLQNL 94 (332)
T ss_pred CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEE----EecccccCCCcccccc
Confidence 4567999999999854211 11 1468999999999999 8888999988632
Q ss_pred -C-------cHHHHHHHHHHHHH-------------------hcC-CCcEEEEEeChHHHHHHHHHHHhccCc-----cc
Q 022749 146 -Q-------DAMEIDQLISYLIN-------------------KDN-SEGVVLLGHSTGCQDIVHYMRANAACS-----RA 192 (292)
Q Consensus 146 -~-------~v~Dl~~~i~~l~~-------------------~~~-~~~vvLvGHSmGG~ial~ya~~~~~~p-----~~ 192 (292)
. .++|+.++++.+++ +.+ ..+++|+||||||.+++.|+.++...+ ..
T Consensus 95 ~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~ 174 (332)
T TIGR01607 95 RGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLN 174 (332)
T ss_pred ccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccc
Confidence 1 13556666665543 122 468999999999999999998752111 26
Q ss_pred cceEEEeCCCCC
Q 022749 193 VRAAIFQAPVSD 204 (292)
Q Consensus 193 V~glIL~aP~~d 204 (292)
|+|+|+++|+..
T Consensus 175 i~g~i~~s~~~~ 186 (332)
T TIGR01607 175 IKGCISLSGMIS 186 (332)
T ss_pred cceEEEeccceE
Confidence 999999998753
No 44
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.53 E-value=1.1e-13 Score=130.47 Aligned_cols=100 Identities=19% Similarity=0.176 Sum_probs=80.6
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCC---CcHHHHHHHHHHHHHhcCCCcEEE
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ---QDAMEIDQLISYLINKDNSEGVVL 169 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~---~~v~Dl~~~i~~l~~~~~~~~vvL 169 (292)
.+++|||+||++ .+...|..+++.|.+ +|+|+ ++|+||||.+... .+.+++.+.+..+.++.+..+++|
T Consensus 130 ~~~~vl~~HG~~---~~~~~~~~~~~~l~~-~~~v~----~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 201 (371)
T PRK14875 130 DGTPVVLIHGFG---GDLNNWLFNHAALAA-GRPVI----ALDLPGHGASSKAVGAGSLDELAAAVLAFLDALGIERAHL 201 (371)
T ss_pred CCCeEEEECCCC---CccchHHHHHHHHhc-CCEEE----EEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCccEEE
Confidence 468999999998 455567778888986 69999 7788999998532 345565555555556667789999
Q ss_pred EEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 170 LGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 170 vGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
+||||||.+++.+|.++ +.+|+++|+++|..
T Consensus 202 vG~S~Gg~~a~~~a~~~---~~~v~~lv~~~~~~ 232 (371)
T PRK14875 202 VGHSMGGAVALRLAARA---PQRVASLTLIAPAG 232 (371)
T ss_pred EeechHHHHHHHHHHhC---chheeEEEEECcCC
Confidence 99999999999999998 88999999998863
No 45
>PRK13604 luxD acyl transferase; Provisional
Probab=99.53 E-value=8.1e-14 Score=130.55 Aligned_cols=100 Identities=12% Similarity=0.125 Sum_probs=82.0
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCC-CCCCC-------CCcHHHHHHHHHHHHHhcCC
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGY-GTSSL-------QQDAMEIDQLISYLINKDNS 164 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~-G~S~~-------~~~v~Dl~~~i~~l~~~~~~ 164 (292)
..++||++||++. ...++..+|++|.++||.|+ ++|+||+ |.|+. ....+|+.++++|++++ +.
T Consensus 36 ~~~~vIi~HGf~~---~~~~~~~~A~~La~~G~~vL----rfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~-~~ 107 (307)
T PRK13604 36 KNNTILIASGFAR---RMDHFAGLAEYLSSNGFHVI----RYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTR-GI 107 (307)
T ss_pred CCCEEEEeCCCCC---ChHHHHHHHHHHHHCCCEEE----EecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhc-CC
Confidence 4578999999995 33457789999999999999 8898987 88753 22468999999999875 56
Q ss_pred CcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCCh
Q 022749 165 EGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 165 ~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~ 205 (292)
+++.|+||||||.+++..|.+ .+|+++|+.+|..+.
T Consensus 108 ~~I~LiG~SmGgava~~~A~~-----~~v~~lI~~sp~~~l 143 (307)
T PRK13604 108 NNLGLIAASLSARIAYEVINE-----IDLSFLITAVGVVNL 143 (307)
T ss_pred CceEEEEECHHHHHHHHHhcC-----CCCCEEEEcCCcccH
Confidence 899999999999998665553 349999999998873
No 46
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.53 E-value=9.6e-14 Score=127.63 Aligned_cols=104 Identities=16% Similarity=0.159 Sum_probs=81.1
Q ss_pred CCceEEEECCCCCCC-CChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCC-----CcHHHHHHHHHHHHHhc-CCC
Q 022749 93 YQQQVIFIGGLTDGF-FATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ-----QDAMEIDQLISYLINKD-NSE 165 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~-~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~-----~~v~Dl~~~i~~l~~~~-~~~ 165 (292)
.+++||++||..+.. ...+.+..+++.|+++||+|+ ++|++|||.|... ...+|+.+++++++++. +.+
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~----~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~g~~ 100 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVL----RFDYRGMGDSEGENLGFEGIDADIAAAIDAFREAAPHLR 100 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEE----EeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCC
Confidence 345777777755322 345556788999999999999 7888999998643 23478899999987654 567
Q ss_pred cEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 166 GVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 166 ~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
+++|+||||||.+++.++.. +.+|+++|+++|...
T Consensus 101 ~i~l~G~S~Gg~~a~~~a~~----~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 101 RIVAWGLCDAASAALLYAPA----DLRVAGLVLLNPWVR 135 (274)
T ss_pred cEEEEEECHHHHHHHHHhhh----CCCccEEEEECCccC
Confidence 89999999999999999765 468999999999754
No 47
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.52 E-value=1.3e-13 Score=122.57 Aligned_cols=106 Identities=14% Similarity=0.203 Sum_probs=85.5
Q ss_pred eEEEEeCCCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCC-------CCCcHHHHHHHHHH
Q 022749 85 QVAFKTGDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS-------LQQDAMEIDQLISY 157 (292)
Q Consensus 85 ~~~y~~g~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~-------~~~~v~Dl~~~i~~ 157 (292)
.++|..|+ .+|+++||++ ++.+-.+.|+++|+++||.|+ +..+||||... ..+..+|+.+..++
T Consensus 8 pf~f~~G~--~AVLllHGFT---Gt~~Dvr~Lgr~L~e~GyTv~----aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~ 78 (243)
T COG1647 8 PFTFEGGN--RAVLLLHGFT---GTPRDVRMLGRYLNENGYTVY----APRYPGHGTLPEDFLKTTPRDWWEDVEDGYRD 78 (243)
T ss_pred CeeeccCC--EEEEEEeccC---CCcHHHHHHHHHHHHCCceEe----cCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHH
Confidence 34554443 8999999999 566667899999999999999 66779999864 23446778888888
Q ss_pred HHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCCh
Q 022749 158 LINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 158 l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~ 205 (292)
|+++ +++.|.++|-||||.+++.+|.++ | ++++|.+++....
T Consensus 79 L~~~-gy~eI~v~GlSmGGv~alkla~~~---p--~K~iv~m~a~~~~ 120 (243)
T COG1647 79 LKEA-GYDEIAVVGLSMGGVFALKLAYHY---P--PKKIVPMCAPVNV 120 (243)
T ss_pred HHHc-CCCeEEEEeecchhHHHHHHHhhC---C--ccceeeecCCccc
Confidence 8754 899999999999999999999988 4 8999987665543
No 48
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.47 E-value=3.4e-13 Score=129.66 Aligned_cols=115 Identities=17% Similarity=0.232 Sum_probs=80.5
Q ss_pred CCceEEEEeCC-----CCceEEEECCCCCCCCChh----------hHHHHHH---HHhhCCcEEEEecccccCCCC-CCC
Q 022749 82 KPVQVAFKTGD-----YQQQVIFIGGLTDGFFATE----------YLEPLAI---ALDKERWSLVQFLMTSSYTGY-GTS 142 (292)
Q Consensus 82 ~~~~~~y~~g~-----~~~~VV~vHG~~~g~~s~~----------~~~~la~---~L~~~Gy~Vi~~~l~~D~~G~-G~S 142 (292)
++.+++|...+ .+++|||+||++.+..... +|..++. .|...+|+|| ++|++|+ |.|
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi----~~Dl~G~~~~s 106 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVI----CSNVLGGCKGS 106 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEE----eccCCCCCCCC
Confidence 35667887532 2689999999995432111 4666652 4433589999 7777883 433
Q ss_pred CC-----------------CCcHHHHHHHHHHHHHhcCCCc-EEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 143 SL-----------------QQDAMEIDQLISYLINKDNSEG-VVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 143 ~~-----------------~~~v~Dl~~~i~~l~~~~~~~~-vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
+. .-.++|+.+.+..+.++++.++ ++|+||||||.+++.+|.++ |++|+++|++++..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~---p~~v~~lvl~~~~~ 182 (379)
T PRK00175 107 TGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDY---PDRVRSALVIASSA 182 (379)
T ss_pred CCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhC---hHhhhEEEEECCCc
Confidence 21 1134555555555556668888 59999999999999999999 99999999998754
No 49
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.46 E-value=5e-13 Score=108.99 Aligned_cols=94 Identities=23% Similarity=0.422 Sum_probs=76.7
Q ss_pred eEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHH-hcCCCcEEEEEeCh
Q 022749 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLIN-KDNSEGVVLLGHST 174 (292)
Q Consensus 96 ~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~-~~~~~~vvLvGHSm 174 (292)
+||++||++. +...|..+++.|+++||.|+ ..|+|++|.+.. ..++.++++++.+ ..+..+++|+|||+
T Consensus 1 ~vv~~HG~~~---~~~~~~~~~~~l~~~G~~v~----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~l~G~S~ 70 (145)
T PF12695_consen 1 VVVLLHGWGG---SRRDYQPLAEALAEQGYAVV----AFDYPGHGDSDG---ADAVERVLADIRAGYPDPDRIILIGHSM 70 (145)
T ss_dssp EEEEECTTTT---TTHHHHHHHHHHHHTTEEEE----EESCTTSTTSHH---SHHHHHHHHHHHHHHCTCCEEEEEEETH
T ss_pred CEEEECCCCC---CHHHHHHHHHHHHHCCCEEE----EEecCCCCccch---hHHHHHHHHHHHhhcCCCCcEEEEEEcc
Confidence 6899999994 45557789999999999999 778899998732 3466677776532 24778999999999
Q ss_pred HHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 175 GCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 175 GG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
||.+++.++.++ .+|+++|+++|..
T Consensus 71 Gg~~a~~~~~~~----~~v~~~v~~~~~~ 95 (145)
T PF12695_consen 71 GGAIAANLAARN----PRVKAVVLLSPYP 95 (145)
T ss_dssp HHHHHHHHHHHS----TTESEEEEESESS
T ss_pred CcHHHHHHhhhc----cceeEEEEecCcc
Confidence 999999999974 6899999999953
No 50
>PRK10566 esterase; Provisional
Probab=99.44 E-value=1.1e-12 Score=117.39 Aligned_cols=97 Identities=18% Similarity=0.183 Sum_probs=72.2
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCC--------------CcHHHHHHHHHHH
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ--------------QDAMEIDQLISYL 158 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~--------------~~v~Dl~~~i~~l 158 (292)
..|+||++||++. +...|..+++.|+++||+|+ +.|+||||.+... ...+|+.++++++
T Consensus 26 ~~p~vv~~HG~~~---~~~~~~~~~~~l~~~G~~v~----~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 98 (249)
T PRK10566 26 PLPTVFFYHGFTS---SKLVYSYFAVALAQAGFRVI----MPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAI 98 (249)
T ss_pred CCCEEEEeCCCCc---ccchHHHHHHHHHhCCCEEE----EecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 3589999999984 33446678999999999999 7788999875211 1246677777877
Q ss_pred HHh--cCCCcEEEEEeChHHHHHHHHHHHhccCccccce-EEEeC
Q 022749 159 INK--DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRA-AIFQA 200 (292)
Q Consensus 159 ~~~--~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~g-lIL~a 200 (292)
+++ .+.++++++||||||.+++.++.++ ++ +++ +++.+
T Consensus 99 ~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~---~~-~~~~~~~~~ 139 (249)
T PRK10566 99 REEGWLLDDRLAVGGASMGGMTALGIMARH---PW-VKCVASLMG 139 (249)
T ss_pred HhcCCcCccceeEEeecccHHHHHHHHHhC---CC-eeEEEEeeC
Confidence 654 3457899999999999999998886 54 544 44443
No 51
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.43 E-value=2.3e-12 Score=125.71 Aligned_cols=103 Identities=21% Similarity=0.232 Sum_probs=77.8
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCC---CcHH-HHHHHHHHHHHh--cCCCc
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ---QDAM-EIDQLISYLINK--DNSEG 166 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~---~~v~-Dl~~~i~~l~~~--~~~~~ 166 (292)
..|+||++||+.. ....+|..+++.|.++||+|+ ++|+||+|.+... .+.. ...++++++... .+.++
T Consensus 193 ~~P~Vli~gG~~~--~~~~~~~~~~~~La~~Gy~vl----~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~r 266 (414)
T PRK05077 193 PFPTVLVCGGLDS--LQTDYYRLFRDYLAPRGIAML----TIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTR 266 (414)
T ss_pred CccEEEEeCCccc--chhhhHHHHHHHHHhCCCEEE----EECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcccCccc
Confidence 3566777777652 113456678899999999999 7788999998542 2332 234677777543 25679
Q ss_pred EEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 167 VVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 167 vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
|.++||||||.+++.+|..+ |++|+++|+++|..+
T Consensus 267 i~l~G~S~GG~~Al~~A~~~---p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 267 VAAFGFRFGANVAVRLAYLE---PPRLKAVACLGPVVH 301 (414)
T ss_pred EEEEEEChHHHHHHHHHHhC---CcCceEEEEECCccc
Confidence 99999999999999999887 889999999998764
No 52
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.43 E-value=1.9e-12 Score=144.44 Aligned_cols=99 Identities=20% Similarity=0.220 Sum_probs=79.6
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC-----------cHHHHHHHHHHHHHh
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ-----------DAMEIDQLISYLINK 161 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~-----------~v~Dl~~~i~~l~~~ 161 (292)
.+++|||+||++ .+...|..+++.|.+ +|+|+ .+|+||||.|.... .++++.+.+..+.++
T Consensus 1370 ~~~~vVllHG~~---~s~~~w~~~~~~L~~-~~rVi----~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~ 1441 (1655)
T PLN02980 1370 EGSVVLFLHGFL---GTGEDWIPIMKAISG-SARCI----SIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEH 1441 (1655)
T ss_pred CCCeEEEECCCC---CCHHHHHHHHHHHhC-CCEEE----EEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHH
Confidence 368999999999 556678889999985 69999 77889999986421 244555544444455
Q ss_pred cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 162 DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 162 ~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
++.++++|+||||||.+++.++.++ |++|+++|++++.
T Consensus 1442 l~~~~v~LvGhSmGG~iAl~~A~~~---P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1442 ITPGKVTLVGYSMGARIALYMALRF---SDKIEGAVIISGS 1479 (1655)
T ss_pred hCCCCEEEEEECHHHHHHHHHHHhC---hHhhCEEEEECCC
Confidence 6788999999999999999999999 9999999998764
No 53
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.43 E-value=1e-12 Score=124.66 Aligned_cols=106 Identities=11% Similarity=0.100 Sum_probs=83.0
Q ss_pred CCceEEEECCCCCCCCC--hhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcH-----HHHHHHHHHHHHhcCCC
Q 022749 93 YQQQVIFIGGLTDGFFA--TEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDA-----MEIDQLISYLINKDNSE 165 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s--~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v-----~Dl~~~i~~l~~~~~~~ 165 (292)
.+++||++||+....+. ..-++.++++|.++||+|+ .+|++|+|.+...... +|+.+++++++++.+.+
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~----~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~~~ 136 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVY----LIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTSKLD 136 (350)
T ss_pred CCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEE----EEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 35689999998632211 1112578999999999999 7788999977543322 34778888988877889
Q ss_pred cEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCCh
Q 022749 166 GVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 166 ~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~ 205 (292)
+++++||||||.+++.|+.++ +++|+++|+++|..+.
T Consensus 137 ~i~lvGhS~GG~i~~~~~~~~---~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 137 QISLLGICQGGTFSLCYAALY---PDKIKNLVTMVTPVDF 173 (350)
T ss_pred cccEEEECHHHHHHHHHHHhC---chheeeEEEecccccc
Confidence 999999999999999999998 8899999999987654
No 54
>PLN00021 chlorophyllase
Probab=99.39 E-value=2.5e-12 Score=121.27 Aligned_cols=107 Identities=16% Similarity=0.216 Sum_probs=80.9
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHh----------
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINK---------- 161 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~---------- 161 (292)
+..|+|||+||++ .....|..+++.|+++||.|+ +.|++|++......+++|..++++++.+.
T Consensus 50 g~~PvVv~lHG~~---~~~~~y~~l~~~Las~G~~Vv----apD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~ 122 (313)
T PLN00021 50 GTYPVLLFLHGYL---LYNSFYSQLLQHIASHGFIVV----APQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVR 122 (313)
T ss_pred CCCCEEEEECCCC---CCcccHHHHHHHHHhCCCEEE----EecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccc
Confidence 4568999999998 344557789999999999999 66767775444445567777777777542
Q ss_pred cCCCcEEEEEeChHHHHHHHHHHHhcc--CccccceEEEeCCCCCh
Q 022749 162 DNSEGVVLLGHSTGCQDIVHYMRANAA--CSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 162 ~~~~~vvLvGHSmGG~ial~ya~~~~~--~p~~V~glIL~aP~~d~ 205 (292)
.+.++++|+||||||.+++.+|.+++. .+.+|.++|++.|+...
T Consensus 123 ~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 123 PDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGT 168 (313)
T ss_pred cChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccc
Confidence 234689999999999999999988721 11368999999997543
No 55
>PRK05855 short chain dehydrogenase; Validated
Probab=99.39 E-value=3.3e-12 Score=127.03 Aligned_cols=105 Identities=20% Similarity=0.239 Sum_probs=73.7
Q ss_pred CCceEEEEe-C-CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC-----c----HHH
Q 022749 82 KPVQVAFKT-G-DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ-----D----AME 150 (292)
Q Consensus 82 ~~~~~~y~~-g-~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~-----~----v~D 150 (292)
++.+++|.. + +.+++|||+||++ .+..+|..+++.|. .+|+|+ ++|+||||.|+... . ++|
T Consensus 11 ~g~~l~~~~~g~~~~~~ivllHG~~---~~~~~w~~~~~~L~-~~~~Vi----~~D~~G~G~S~~~~~~~~~~~~~~a~d 82 (582)
T PRK05855 11 DGVRLAVYEWGDPDRPTVVLVHGYP---DNHEVWDGVAPLLA-DRFRVV----AYDVRGAGRSSAPKRTAAYTLARLADD 82 (582)
T ss_pred CCEEEEEEEcCCCCCCeEEEEcCCC---chHHHHHHHHHHhh-cceEEE----EecCCCCCCCCCCCcccccCHHHHHHH
Confidence 455666654 3 2478999999998 55677888999995 589999 88889999987432 1 234
Q ss_pred HHHHHHHHHHhcCCC-cEEEEEeChHHHHHHHHHHHhccCccccceEEEe
Q 022749 151 IDQLISYLINKDNSE-GVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQ 199 (292)
Q Consensus 151 l~~~i~~l~~~~~~~-~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~ 199 (292)
+.++++.+ +.. +++|+||||||.+++.++.+. ..+.++..++++
T Consensus 83 l~~~i~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~-~~~~~v~~~~~~ 127 (582)
T PRK05855 83 FAAVIDAV----SPDRPVHLLAHDWGSIQGWEAVTRP-RAAGRIASFTSV 127 (582)
T ss_pred HHHHHHHh----CCCCcEEEEecChHHHHHHHHHhCc-cchhhhhhheec
Confidence 44444443 444 599999999999999887763 224455555444
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.38 E-value=4.6e-12 Score=110.94 Aligned_cols=90 Identities=13% Similarity=0.219 Sum_probs=67.2
Q ss_pred ceEEEECCCCCCCCChhhHH--HHHHHHhhC--CcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEE
Q 022749 95 QQVIFIGGLTDGFFATEYLE--PLAIALDKE--RWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLL 170 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~--~la~~L~~~--Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLv 170 (292)
|+||++||++.+ ...|+ .+.+.|.+. +|+|+ ++|+|||| +++.+.++.+.++.+.++++|+
T Consensus 2 p~illlHGf~ss---~~~~~~~~~~~~l~~~~~~~~v~----~~dl~g~~--------~~~~~~l~~l~~~~~~~~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSS---PRSAKATLLKNWLAQHHPDIEMI----VPQLPPYP--------ADAAELLESLVLEHGGDPLGLV 66 (190)
T ss_pred CeEEEECCCCCC---cchHHHHHHHHHHHHhCCCCeEE----eCCCCCCH--------HHHHHHHHHHHHHcCCCCeEEE
Confidence 689999999943 33343 355666543 79999 77779985 3455555555555678899999
Q ss_pred EeChHHHHHHHHHHHhccCccccceEEEeCCCCCh
Q 022749 171 GHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 171 GHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~ 205 (292)
||||||.+++.+|.++ |. ++|+++|..++
T Consensus 67 G~S~Gg~~a~~~a~~~---~~---~~vl~~~~~~~ 95 (190)
T PRK11071 67 GSSLGGYYATWLSQCF---ML---PAVVVNPAVRP 95 (190)
T ss_pred EECHHHHHHHHHHHHc---CC---CEEEECCCCCH
Confidence 9999999999999998 52 46889887764
No 57
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.37 E-value=5.6e-12 Score=123.57 Aligned_cols=104 Identities=15% Similarity=0.112 Sum_probs=77.9
Q ss_pred CCCceEEEECCCCCCCCChhhHH-HHHHHHh--hCCcEEEEecccccCCCCCCCCCCC-------cHHHHHHHHHHHHHh
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLE-PLAIALD--KERWSLVQFLMTSSYTGYGTSSLQQ-------DAMEIDQLISYLINK 161 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~-~la~~L~--~~Gy~Vi~~~l~~D~~G~G~S~~~~-------~v~Dl~~~i~~l~~~ 161 (292)
..++++|+|||+.+. .....|. .+++.|. +..|+|| +.|++|+|.+.... ..+++.+++++|.+.
T Consensus 39 ~~~ptvIlIHG~~~s-~~~~~w~~~l~~al~~~~~d~nVI----~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~ 113 (442)
T TIGR03230 39 HETKTFIVIHGWTVT-GMFESWVPKLVAALYEREPSANVI----VVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEE 113 (442)
T ss_pred CCCCeEEEECCCCcC-CcchhhHHHHHHHHHhccCCCEEE----EEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHh
Confidence 357899999999853 2223343 4666654 2369999 77779999876432 135677778877543
Q ss_pred --cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 162 --DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 162 --~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
++.++++||||||||+||..++..+ +++|.++|++.|..
T Consensus 114 ~gl~l~~VhLIGHSLGAhIAg~ag~~~---p~rV~rItgLDPAg 154 (442)
T TIGR03230 114 FNYPWDNVHLLGYSLGAHVAGIAGSLT---KHKVNRITGLDPAG 154 (442)
T ss_pred hCCCCCcEEEEEECHHHHHHHHHHHhC---CcceeEEEEEcCCC
Confidence 3578999999999999999998887 88999999998864
No 58
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.36 E-value=2.3e-12 Score=122.11 Aligned_cols=102 Identities=21% Similarity=0.252 Sum_probs=76.8
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhC-CcEEEEecccccCCCCCCCC-CCCc----HHHHHHHHHHHHHhcCCC
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKE-RWSLVQFLMTSSYTGYGTSS-LQQD----AMEIDQLISYLINKDNSE 165 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~-Gy~Vi~~~l~~D~~G~G~S~-~~~~----v~Dl~~~i~~l~~~~~~~ 165 (292)
..+++||++|||++ +...|+.+...|.+. |+.|+ ++|.+|||.++ .+.. +.+....+..+..+...+
T Consensus 56 ~~~~pvlllHGF~~---~~~~w~~~~~~L~~~~~~~v~----aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~ 128 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGA---SSFSWRRVVPLLSKAKGLRVL----AIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVE 128 (326)
T ss_pred CCCCcEEEeccccC---CcccHhhhccccccccceEEE----EEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCc
Confidence 36899999999995 445577788888764 48999 77779999543 3332 344444444444445677
Q ss_pred cEEEEEeChHHHHHHHHHHHhccCccccceEE---EeCCCC
Q 022749 166 GVVLLGHSTGCQDIVHYMRANAACSRAVRAAI---FQAPVS 203 (292)
Q Consensus 166 ~vvLvGHSmGG~ial~ya~~~~~~p~~V~glI---L~aP~~ 203 (292)
+++|+||||||.+++.+|+.+ |+.|+++| +++|..
T Consensus 129 ~~~lvghS~Gg~va~~~Aa~~---P~~V~~lv~~~~~~~~~ 166 (326)
T KOG1454|consen 129 PVSLVGHSLGGIVALKAAAYY---PETVDSLVLLDLLGPPV 166 (326)
T ss_pred ceEEEEeCcHHHHHHHHHHhC---cccccceeeeccccccc
Confidence 899999999999999999999 99999999 666544
No 59
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.35 E-value=5.5e-12 Score=116.71 Aligned_cols=104 Identities=15% Similarity=0.224 Sum_probs=76.0
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHH-hhCCcEEEEecccccCCCCCCCCCCC-------cHHHHHHHHHHHHHh--
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIAL-DKERWSLVQFLMTSSYTGYGTSSLQQ-------DAMEIDQLISYLINK-- 161 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L-~~~Gy~Vi~~~l~~D~~G~G~S~~~~-------~v~Dl~~~i~~l~~~-- 161 (292)
..+++||+|||+.++. ...+...+++.| .+.+|+|+ .+|+++++...... ..+++.++++++.+.
T Consensus 34 ~~~p~vilIHG~~~~~-~~~~~~~l~~~ll~~~~~nVi----~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g 108 (275)
T cd00707 34 PSRPTRFIIHGWTSSG-EESWISDLRKAYLSRGDYNVI----VVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTG 108 (275)
T ss_pred CCCCcEEEEcCCCCCC-CCcHHHHHHHHHHhcCCCEEE----EEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcC
Confidence 4578999999998643 122334566544 44579999 66778875433221 135677778887654
Q ss_pred cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 162 DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 162 ~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
.+.++++||||||||++|..++.++ +++|+++|++.|..
T Consensus 109 ~~~~~i~lIGhSlGa~vAg~~a~~~---~~~v~~iv~LDPa~ 147 (275)
T cd00707 109 LSLENVHLIGHSLGAHVAGFAGKRL---NGKLGRITGLDPAG 147 (275)
T ss_pred CChHHEEEEEecHHHHHHHHHHHHh---cCccceeEEecCCc
Confidence 3567999999999999999999988 78999999998864
No 60
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.29 E-value=3.4e-11 Score=106.37 Aligned_cols=104 Identities=17% Similarity=0.084 Sum_probs=75.0
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCC-------------CCCcHHHHHHHHHHH
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS-------------LQQDAMEIDQLISYL 158 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~-------------~~~~v~Dl~~~i~~l 158 (292)
+..|+||++||.+++.........+.+.+.+.||.|+ .+|++|++... ...+..|+.++++++
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv----~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 86 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLV----APEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAV 86 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEE----ecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHH
Confidence 3568999999988532111100124555566799999 67778875321 123567889999998
Q ss_pred HHhcC--CCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 159 INKDN--SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 159 ~~~~~--~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
.++.+ .++++|+||||||.+++.++.++ |+.+.+++.+++.
T Consensus 87 ~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~---p~~~~~~~~~~g~ 129 (212)
T TIGR01840 87 KANYSIDPNRVYVTGLSAGGGMTAVLGCTY---PDVFAGGASNAGL 129 (212)
T ss_pred HHhcCcChhheEEEEECHHHHHHHHHHHhC---chhheEEEeecCC
Confidence 76543 35899999999999999999998 8899998877654
No 61
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.26 E-value=9.6e-11 Score=99.71 Aligned_cols=100 Identities=19% Similarity=0.300 Sum_probs=68.7
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhC--CcEEEEecccccCCCCCCCC--CCCcHHHHHHHHHHHHHhcCCCcEEE
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKE--RWSLVQFLMTSSYTGYGTSS--LQQDAMEIDQLISYLINKDNSEGVVL 169 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~--Gy~Vi~~~l~~D~~G~G~S~--~~~~v~Dl~~~i~~l~~~~~~~~vvL 169 (292)
+++|+++||+.. ....|......+... .|+|+ ..|+||||.|. .. ........+..+.++++..+++|
T Consensus 21 ~~~i~~~hg~~~---~~~~~~~~~~~~~~~~~~~~~~----~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 92 (282)
T COG0596 21 GPPLVLLHGFPG---SSSVWRPVFKVLPALAARYRVI----APDLRGHGRSDPAGY-SLSAYADDLAALLDALGLEKVVL 92 (282)
T ss_pred CCeEEEeCCCCC---chhhhHHHHHHhhccccceEEE----EecccCCCCCCcccc-cHHHHHHHHHHHHHHhCCCceEE
Confidence 569999999984 333343322223221 18999 77889999986 11 11111222333333457778999
Q ss_pred EEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 170 LGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 170 vGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
+||||||.+++.++.++ |++|+++|++++...
T Consensus 93 ~G~S~Gg~~~~~~~~~~---p~~~~~~v~~~~~~~ 124 (282)
T COG0596 93 VGHSMGGAVALALALRH---PDRVRGLVLIGPAPP 124 (282)
T ss_pred EEecccHHHHHHHHHhc---chhhheeeEecCCCC
Confidence 99999999999999999 889999999997643
No 62
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.24 E-value=8.6e-11 Score=113.29 Aligned_cols=106 Identities=17% Similarity=0.293 Sum_probs=90.1
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCC-------CcHHHHHHHHHHHHHhcCCC
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ-------QDAMEIDQLISYLINKDNSE 165 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~-------~~v~Dl~~~i~~l~~~~~~~ 165 (292)
..|.||++||++++-. ..|...++..+.++||+|+ ..++||+|.+.+. .+.+|+++++++++++++..
T Consensus 124 ~~P~vvilpGltg~S~-~~YVr~lv~~a~~~G~r~V----VfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a 198 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSH-ESYVRHLVHEAQRKGYRVV----VFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQA 198 (409)
T ss_pred CCcEEEEecCCCCCCh-hHHHHHHHHHHHhCCcEEE----EECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCC
Confidence 4689999999997643 5788999999999999999 6677999988653 35799999999999999999
Q ss_pred cEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 166 GVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 166 ~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
+++.+|.||||++...|+.+......-+.|++++.|+.
T Consensus 199 ~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 199 PLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWD 236 (409)
T ss_pred ceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccch
Confidence 99999999999999999998644455667788888875
No 63
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.24 E-value=4.3e-11 Score=109.78 Aligned_cols=101 Identities=16% Similarity=0.210 Sum_probs=73.5
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhh-CCcEEEEecccccCCCCCCCCCCC--------cHHHHHHHHHHHHHhc
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGYGTSSLQQ--------DAMEIDQLISYLINKD 162 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~-~Gy~Vi~~~l~~D~~G~G~S~~~~--------~v~Dl~~~i~~l~~~~ 162 (292)
..+|++++.||.+ ++.--|..++..|.. ...+|+ +.|+||||.+...+ ...|+-++++.+-..
T Consensus 72 t~gpil~l~HG~G---~S~LSfA~~a~el~s~~~~r~~----a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge- 143 (343)
T KOG2564|consen 72 TEGPILLLLHGGG---SSALSFAIFASELKSKIRCRCL----ALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGE- 143 (343)
T ss_pred CCccEEEEeecCc---ccchhHHHHHHHHHhhcceeEE----EeeccccCccccCChhhcCHHHHHHHHHHHHHHHhcc-
Confidence 3689999999998 444447778888764 234566 77889999986432 256777777766433
Q ss_pred CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 163 NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 163 ~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
...+|+||||||||.||++.|... ..|. +.|++++.-+
T Consensus 144 ~~~~iilVGHSmGGaIav~~a~~k-~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 144 LPPQIILVGHSMGGAIAVHTAASK-TLPS-LAGLVVIDVV 181 (343)
T ss_pred CCCceEEEeccccchhhhhhhhhh-hchh-hhceEEEEEe
Confidence 356899999999999999988764 3344 8898887554
No 64
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.21 E-value=2.4e-10 Score=102.95 Aligned_cols=107 Identities=19% Similarity=0.241 Sum_probs=69.4
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHh--------hCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhc--
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALD--------KERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKD-- 162 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~--------~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~-- 162 (292)
.+.+||||||.. ++.+-++.++..+. ...++++.+|+.-+...+....+.+..+-+.+.++.+.+.+
T Consensus 3 ~g~pVlFIhG~~---Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~ 79 (225)
T PF07819_consen 3 SGIPVLFIHGNA---GSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKS 79 (225)
T ss_pred CCCEEEEECcCC---CCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhh
Confidence 468999999988 44444555655552 12577885554333322221223344455666666665544
Q ss_pred ---CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 163 ---NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 163 ---~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
+.++|+||||||||.++..++......+..|+++|.++..
T Consensus 80 ~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 80 NRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred ccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 6789999999999999999887653334679999987643
No 65
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.21 E-value=4.1e-11 Score=103.75 Aligned_cols=71 Identities=18% Similarity=0.294 Sum_probs=62.5
Q ss_pred cEEEEecccccCCCCCCCCC---CC----cHHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEE
Q 022749 125 WSLVQFLMTSSYTGYGTSSL---QQ----DAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAI 197 (292)
Q Consensus 125 y~Vi~~~l~~D~~G~G~S~~---~~----~v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glI 197 (292)
|+|+ .+|.||+|.|+. .. ..+|+.+.++.++++++.++++++||||||.+++.||.++ |++|+++|
T Consensus 1 f~vi----~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~---p~~v~~lv 73 (230)
T PF00561_consen 1 FDVI----LFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQY---PERVKKLV 73 (230)
T ss_dssp EEEE----EEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHS---GGGEEEEE
T ss_pred CEEE----EEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHC---chhhcCcE
Confidence 6889 778899999984 11 2578888888888888999999999999999999999999 99999999
Q ss_pred EeCCC
Q 022749 198 FQAPV 202 (292)
Q Consensus 198 L~aP~ 202 (292)
++++.
T Consensus 74 l~~~~ 78 (230)
T PF00561_consen 74 LISPP 78 (230)
T ss_dssp EESES
T ss_pred EEeee
Confidence 99986
No 66
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.21 E-value=8.1e-11 Score=122.11 Aligned_cols=106 Identities=24% Similarity=0.179 Sum_probs=76.0
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCC----------------------------
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ---------------------------- 145 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~---------------------------- 145 (292)
.|+|||+||++ ...+.|..+++.|.++||+|+ ++|+||||.+...
T Consensus 449 ~P~VVllHG~~---g~~~~~~~lA~~La~~Gy~VI----aiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn 521 (792)
T TIGR03502 449 WPVVIYQHGIT---GAKENALAFAGTLAAAGVATI----AIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDN 521 (792)
T ss_pred CcEEEEeCCCC---CCHHHHHHHHHHHHhCCcEEE----EeCCCCCCccccccccccccccccCccceeccccccccccC
Confidence 35899999999 445567789999998899999 8888999988432
Q ss_pred --CcHHHHHHHHHHHH------Hh------cCCCcEEEEEeChHHHHHHHHHHHhcc---Cc-----cccceEEEeCCCC
Q 022749 146 --QDAMEIDQLISYLI------NK------DNSEGVVLLGHSTGCQDIVHYMRANAA---CS-----RAVRAAIFQAPVS 203 (292)
Q Consensus 146 --~~v~Dl~~~i~~l~------~~------~~~~~vvLvGHSmGG~ial~ya~~~~~---~p-----~~V~glIL~aP~~ 203 (292)
+.+.|+..+...+. +. ++..+++++||||||.+++.|+..... .+ -.+.++.|..|..
T Consensus 522 ~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an~~~~~~~~~~l~~~~~a~l~~pgG 601 (792)
T TIGR03502 522 LRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYANTPLGSPTADALYAVNAASLQNPGG 601 (792)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcCccccCCccccccccceeeeecCCc
Confidence 01345555555554 11 345799999999999999999986421 01 1456777877765
Q ss_pred Chh
Q 022749 204 DRE 206 (292)
Q Consensus 204 d~~ 206 (292)
...
T Consensus 602 gia 604 (792)
T TIGR03502 602 GIA 604 (792)
T ss_pred cHH
Confidence 443
No 67
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.21 E-value=8.5e-11 Score=118.40 Aligned_cols=107 Identities=15% Similarity=0.011 Sum_probs=82.8
Q ss_pred CCceEEEECCCCCCCCC-hhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC------CCcHHHHHHHHHHHHHh-cCC
Q 022749 93 YQQQVIFIGGLTDGFFA-TEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL------QQDAMEIDQLISYLINK-DNS 164 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s-~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~------~~~v~Dl~~~i~~l~~~-~~~ 164 (292)
..|+||++||++..... ..+....++.|.++||.|+ +.|+||+|.|.. ...++|+.++++++.++ ...
T Consensus 21 ~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv----~~D~RG~g~S~g~~~~~~~~~~~D~~~~i~~l~~q~~~~ 96 (550)
T TIGR00976 21 PVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVV----IQDTRGRGASEGEFDLLGSDEAADGYDLVDWIAKQPWCD 96 (550)
T ss_pred CCCEEEEecCCCCchhhccccccccHHHHHhCCcEEE----EEeccccccCCCceEecCcccchHHHHHHHHHHhCCCCC
Confidence 56899999999843210 0111234567778899999 788899999863 45678999999999754 234
Q ss_pred CcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 165 EGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 165 ~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
.+|.++||||||.+++.+|.++ +++|+++|..++..+..
T Consensus 97 ~~v~~~G~S~GG~~a~~~a~~~---~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 97 GNVGMLGVSYLAVTQLLAAVLQ---PPALRAIAPQEGVWDLY 135 (550)
T ss_pred CcEEEEEeChHHHHHHHHhccC---CCceeEEeecCcccchh
Confidence 6999999999999999999987 88999999988876543
No 68
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.17 E-value=1.9e-10 Score=115.52 Aligned_cols=108 Identities=9% Similarity=0.102 Sum_probs=79.1
Q ss_pred CCceEEEECCCCCCCCChhh--HHHHHHHHhhCCcEEEEecccccCCCCCCCCCC----CcH-HHHHHHHHHHHHhcCCC
Q 022749 93 YQQQVIFIGGLTDGFFATEY--LEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ----QDA-MEIDQLISYLINKDNSE 165 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~--~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~----~~v-~Dl~~~i~~l~~~~~~~ 165 (292)
.+++||||||+....+.... -+.++++|.++||+|+ .+|++|+|.+... +.+ +++.+.++.+++..+.+
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~----~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~ 262 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVF----VISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEK 262 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEE----EEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCC
Confidence 57899999999743221110 1368899999999999 7777999987542 223 35778888888777899
Q ss_pred cEEEEEeChHHHHHH----HHHHHhccCccccceEEEeCCCCChh
Q 022749 166 GVVLLGHSTGCQDIV----HYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 166 ~vvLvGHSmGG~ial----~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
+++++||||||.++. .|+..+ .+++|+++|++++..|..
T Consensus 263 kv~lvG~cmGGtl~a~ala~~aa~~--~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 263 QVNCVGYCIGGTLLSTALAYLAARG--DDKRIKSATFFTTLLDFS 305 (532)
T ss_pred CeEEEEECcCcHHHHHHHHHHHHhC--CCCccceEEEEecCcCCC
Confidence 999999999999863 234432 156899999998876644
No 69
>PLN02872 triacylglycerol lipase
Probab=99.15 E-value=2.5e-11 Score=117.93 Aligned_cols=107 Identities=19% Similarity=0.202 Sum_probs=74.7
Q ss_pred CCceEEEECCCCCCCCChh---hHHHHHHHHhhCCcEEEEecccccCCCCCCCC----C---CC---------c-HHHHH
Q 022749 93 YQQQVIFIGGLTDGFFATE---YLEPLAIALDKERWSLVQFLMTSSYTGYGTSS----L---QQ---------D-AMEID 152 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~---~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~----~---~~---------~-v~Dl~ 152 (292)
.+++||++||+..+...+. ..+.++..|+++||+|+ ..|.||++.+. . +. . .+|+.
T Consensus 73 ~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~----l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~ 148 (395)
T PLN02872 73 RGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVW----VGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLA 148 (395)
T ss_pred CCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcc----cccccccccccCCCCCCccchhccCCcHHHHHHHHHH
Confidence 3679999999974322211 11347778888999999 77779976431 1 11 1 36999
Q ss_pred HHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCCh
Q 022749 153 QLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 153 ~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~ 205 (292)
++++++.+. ..++++++||||||.+++.++ .+++..++|+.+++++|....
T Consensus 149 a~id~i~~~-~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~ 199 (395)
T PLN02872 149 EMIHYVYSI-TNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYL 199 (395)
T ss_pred HHHHHHHhc-cCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhh
Confidence 999998754 347999999999999998655 441112478999999997543
No 70
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.14 E-value=5.1e-10 Score=102.95 Aligned_cols=109 Identities=16% Similarity=0.082 Sum_probs=67.2
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC---------------------C---CcH
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL---------------------Q---QDA 148 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~---------------------~---~~v 148 (292)
..|+|+++||++.....+.....+...+++.||.|+.+|.. .+|+|.+.. . ...
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~--~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~ 118 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTS--PRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMY 118 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCC--CCcCCCCCCcccccccCCccccccCCcCcccccchHH
Confidence 46899999999843221111111223334569999954431 245543210 0 011
Q ss_pred HHH-HHHHHHHHHh--cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 149 MEI-DQLISYLINK--DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 149 ~Dl-~~~i~~l~~~--~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
..+ +++...+.+. .+.++++|+||||||.+++.++.++ |+.++++|+++|..++.
T Consensus 119 ~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~---p~~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 119 SYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKN---PDRFKSVSAFAPIVAPS 176 (275)
T ss_pred HHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhC---cccceEEEEECCccCcc
Confidence 222 2222233332 3457899999999999999999999 99999999999986643
No 71
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.14 E-value=3.1e-10 Score=103.21 Aligned_cols=107 Identities=20% Similarity=0.339 Sum_probs=81.8
Q ss_pred EEEEeCCC-CceEEEECCCCCCCCChhhHHHHHHHHhh-CCcEEEEecccccCCCCCCCCCC----CcHHHHHHHHHHHH
Q 022749 86 VAFKTGDY-QQQVIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGYGTSSLQ----QDAMEIDQLISYLI 159 (292)
Q Consensus 86 ~~y~~g~~-~~~VV~vHG~~~g~~s~~~~~~la~~L~~-~Gy~Vi~~~l~~D~~G~G~S~~~----~~v~Dl~~~i~~l~ 159 (292)
++++.... .++|++.||...... . .-.+...|.. .+++|+ .+||+|+|.|... ...+|++++.++|+
T Consensus 51 ~y~~~~~~~~~~lly~hGNa~Dlg--q-~~~~~~~l~~~ln~nv~----~~DYSGyG~S~G~psE~n~y~Di~avye~Lr 123 (258)
T KOG1552|consen 51 MYVRPPEAAHPTLLYSHGNAADLG--Q-MVELFKELSIFLNCNVV----SYDYSGYGRSSGKPSERNLYADIKAVYEWLR 123 (258)
T ss_pred EEEcCccccceEEEEcCCcccchH--H-HHHHHHHHhhcccceEE----EEecccccccCCCcccccchhhHHHHHHHHH
Confidence 55555443 589999999863322 1 1223333432 368899 8999999998632 45789999999999
Q ss_pred Hhc-CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 160 NKD-NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 160 ~~~-~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
+.. +.++|+|+|||||....+.+|.++ | ++++||.+|...
T Consensus 124 ~~~g~~~~Iil~G~SiGt~~tv~Lasr~---~--~~alVL~SPf~S 164 (258)
T KOG1552|consen 124 NRYGSPERIILYGQSIGTVPTVDLASRY---P--LAAVVLHSPFTS 164 (258)
T ss_pred hhcCCCceEEEEEecCCchhhhhHhhcC---C--cceEEEeccchh
Confidence 887 478999999999999999999997 5 999999999754
No 72
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.12 E-value=1.1e-10 Score=109.30 Aligned_cols=101 Identities=20% Similarity=0.211 Sum_probs=78.5
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhh-CCcEEEEecccccCCCCCCCCCC------CcHHHHHHHHHHHHHhcCC
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGYGTSSLQ------QDAMEIDQLISYLINKDNS 164 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~-~Gy~Vi~~~l~~D~~G~G~S~~~------~~v~Dl~~~i~~l~~~~~~ 164 (292)
...|+++++||+. ++.+.|..++..|++ .+-.|| +.|.|.||.|... ..++|+..+++..+.....
T Consensus 50 ~~~Pp~i~lHGl~---GS~~Nw~sv~k~Ls~~l~~~v~----~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~ 122 (315)
T KOG2382|consen 50 ERAPPAIILHGLL---GSKENWRSVAKNLSRKLGRDVY----AVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRL 122 (315)
T ss_pred CCCCceEEecccc---cCCCCHHHHHHHhcccccCceE----EEecccCCCCccccccCHHHHHHHHHHHHHHccccccc
Confidence 4679999999998 566779999999974 466789 6677999998642 2357777777776533346
Q ss_pred CcEEEEEeChHH-HHHHHHHHHhccCccccceEEEe--CCC
Q 022749 165 EGVVLLGHSTGC-QDIVHYMRANAACSRAVRAAIFQ--APV 202 (292)
Q Consensus 165 ~~vvLvGHSmGG-~ial~ya~~~~~~p~~V~glIL~--aP~ 202 (292)
.+++|+|||||| .+++.++.++ |..+..+|+. +|.
T Consensus 123 ~~~~l~GHsmGG~~~~m~~t~~~---p~~~~rliv~D~sP~ 160 (315)
T KOG2382|consen 123 DPVVLLGHSMGGVKVAMAETLKK---PDLIERLIVEDISPG 160 (315)
T ss_pred CCceecccCcchHHHHHHHHHhc---CcccceeEEEecCCc
Confidence 799999999999 7777777777 8889888874 563
No 73
>PRK10162 acetyl esterase; Provisional
Probab=99.10 E-value=9.9e-10 Score=103.40 Aligned_cols=110 Identities=13% Similarity=0.053 Sum_probs=82.5
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhh-CCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHH---hcC--CC
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLIN---KDN--SE 165 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~-~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~---~~~--~~ 165 (292)
+..++||++||-+-...+...+..+++.|++ .|+.|+ ..|||.......+..++|+.++++++.+ +++ .+
T Consensus 79 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv----~vdYrlape~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 154 (318)
T PRK10162 79 DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVI----GIDYTLSPEARFPQAIEEIVAVCCYFHQHAEDYGINMS 154 (318)
T ss_pred CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEE----EecCCCCCCCCCCCcHHHHHHHHHHHHHhHHHhCCChh
Confidence 3468999999966333344456667788876 599999 7777877666667778999999999864 233 46
Q ss_pred cEEEEEeChHHHHHHHHHHHhcc---CccccceEEEeCCCCCh
Q 022749 166 GVVLLGHSTGCQDIVHYMRANAA---CSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 166 ~vvLvGHSmGG~ial~ya~~~~~---~p~~V~glIL~aP~~d~ 205 (292)
+++|+|||+||++++.++.+... .+.+++++|++.|+.+.
T Consensus 155 ~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 155 RIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 89999999999999998875421 13579999999997653
No 74
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.09 E-value=8.8e-10 Score=103.48 Aligned_cols=105 Identities=18% Similarity=0.283 Sum_probs=82.4
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC-------CCcHHHHHHHHHHHHHhcCCC
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL-------QQDAMEIDQLISYLINKDNSE 165 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~-------~~~v~Dl~~~i~~l~~~~~~~ 165 (292)
+.|.||++||+.++.. ..|.+.+++++.++||.|+ ..+.||++.+.. ..+.+|+..+++++++..+..
T Consensus 74 ~~P~vVl~HGL~G~s~-s~y~r~L~~~~~~rg~~~V----v~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r 148 (345)
T COG0429 74 KKPLVVLFHGLEGSSN-SPYARGLMRALSRRGWLVV----VFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPR 148 (345)
T ss_pred CCceEEEEeccCCCCc-CHHHHHHHHHHHhcCCeEE----EEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCC
Confidence 4679999999997654 4588999999999999999 667799987642 345699999999998878889
Q ss_pred cEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 166 GVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 166 ~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
++..+|.|+||.+...|+.+.........++++.+|.
T Consensus 149 ~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~ 185 (345)
T COG0429 149 PLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF 185 (345)
T ss_pred ceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHH
Confidence 9999999999977777777653333333445556664
No 75
>PLN02442 S-formylglutathione hydrolase
Probab=99.07 E-value=1.1e-09 Score=101.38 Aligned_cols=108 Identities=16% Similarity=0.146 Sum_probs=71.5
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCC-----C----------C-----CCC-----C
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYG-----T----------S-----SLQ-----Q 146 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G-----~----------S-----~~~-----~ 146 (292)
...|+|+|+||+..+...+.....+.+.+.+.|+.|+ ..|..++| . + ... +
T Consensus 45 ~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv----~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (283)
T PLN02442 45 GKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALV----APDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWR 120 (283)
T ss_pred CCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEE----ecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccc
Confidence 3568999999987432111112334566777899999 44444333 1 0 000 1
Q ss_pred ----cHHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 147 ----DAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 147 ----~v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
..+++..+++...+..+.++++|+||||||..++.++.++ |++++++++++|..++.
T Consensus 121 ~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~---p~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 121 MYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKN---PDKYKSVSAFAPIANPI 181 (283)
T ss_pred hhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhC---chhEEEEEEECCccCcc
Confidence 1244444444433335778999999999999999999999 89999999999987643
No 76
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.02 E-value=2.9e-09 Score=97.68 Aligned_cols=106 Identities=18% Similarity=0.242 Sum_probs=80.0
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHh----------
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINK---------- 161 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~---------- 161 (292)
+.=|+|||+||+. .....+..+.++++..||.|++++ +...+...-..+++++.++++|+.+.
T Consensus 15 g~yPVv~f~~G~~---~~~s~Ys~ll~hvAShGyIVV~~d----~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~ 87 (259)
T PF12740_consen 15 GTYPVVLFLHGFL---LINSWYSQLLEHVASHGYIVVAPD----LYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVK 87 (259)
T ss_pred CCcCEEEEeCCcC---CCHHHHHHHHHHHHhCceEEEEec----ccccCCCCcchhHHHHHHHHHHHHhcchhhcccccc
Confidence 4568999999998 444446689999999999999554 34443333455678888888887541
Q ss_pred cCCCcEEEEEeChHHHHHHHHHHHhcc--CccccceEEEeCCCCC
Q 022749 162 DNSEGVVLLGHSTGCQDIVHYMRANAA--CSRAVRAAIFQAPVSD 204 (292)
Q Consensus 162 ~~~~~vvLvGHSmGG~ial~ya~~~~~--~p~~V~glIL~aP~~d 204 (292)
-+..++.|+|||.||-++...+..+.. .+.+++++|++.|+..
T Consensus 88 ~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 88 PDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred ccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 256689999999999999998887521 1347999999999873
No 77
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.00 E-value=2e-09 Score=95.78 Aligned_cols=104 Identities=25% Similarity=0.326 Sum_probs=83.7
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC-------CCcHHHHHHHHHHHHHhcCC
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL-------QQDAMEIDQLISYLINKDNS 164 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~-------~~~v~Dl~~~i~~l~~~~~~ 164 (292)
+....||++||+-.+ .+..++..+|.+|++.||.++ ++|++|.|.|.- ...++|+..+++++.+. +.
T Consensus 31 gs~e~vvlcHGfrS~-Kn~~~~~~vA~~~e~~gis~f----RfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~-nr 104 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSH-KNAIIMKNVAKALEKEGISAF----RFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNS-NR 104 (269)
T ss_pred CCceEEEEeeccccc-cchHHHHHHHHHHHhcCceEE----EEEecCCCCcCCccccCcccchHHHHHHHHHHhccC-ce
Confidence 566899999999853 445677889999999999999 889999999862 34579999999999752 33
Q ss_pred CcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCCh
Q 022749 165 EGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 165 ~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~ 205 (292)
.--+++|||-||.+++.|+.++ .+ |.-+|-++.-.+.
T Consensus 105 ~v~vi~gHSkGg~Vvl~ya~K~---~d-~~~viNcsGRydl 141 (269)
T KOG4667|consen 105 VVPVILGHSKGGDVVLLYASKY---HD-IRNVINCSGRYDL 141 (269)
T ss_pred EEEEEEeecCccHHHHHHHHhh---cC-chheEEcccccch
Confidence 3457899999999999999998 43 7788877765443
No 78
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.00 E-value=2.5e-09 Score=114.75 Aligned_cols=99 Identities=12% Similarity=0.077 Sum_probs=66.9
Q ss_pred CCceEEEECCCCCCCCChhhHHH-----HHHHHhhCCcEEEEecccccCCCCCCCCCC------CcHHHHHHHHHHH---
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEP-----LAIALDKERWSLVQFLMTSSYTGYGTSSLQ------QDAMEIDQLISYL--- 158 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~-----la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~------~~v~Dl~~~i~~l--- 158 (292)
.+++||||||+.. +...|+. +.+.|.++||+|+. +| ||.++.+ ...+++..+++.+
T Consensus 66 ~~~plllvhg~~~---~~~~~d~~~~~s~v~~L~~~g~~v~~----~d---~G~~~~~~~~~~~~l~~~i~~l~~~l~~v 135 (994)
T PRK07868 66 VGPPVLMVHPMMM---SADMWDVTRDDGAVGILHRAGLDPWV----ID---FGSPDKVEGGMERNLADHVVALSEAIDTV 135 (994)
T ss_pred CCCcEEEECCCCC---CccceecCCcccHHHHHHHCCCEEEE----Ec---CCCCChhHcCccCCHHHHHHHHHHHHHHH
Confidence 5689999999984 3334543 37889888999994 45 3443321 1123343333333
Q ss_pred HHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 159 INKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 159 ~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
++ ...++++|+||||||.+++.|+..+ .+++|+++|++++..|
T Consensus 136 ~~-~~~~~v~lvG~s~GG~~a~~~aa~~--~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 136 KD-VTGRDVHLVGYSQGGMFCYQAAAYR--RSKDIASIVTFGSPVD 178 (994)
T ss_pred HH-hhCCceEEEEEChhHHHHHHHHHhc--CCCccceEEEEecccc
Confidence 22 2456899999999999999998754 1558999998776543
No 79
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.98 E-value=3.2e-09 Score=103.03 Aligned_cols=118 Identities=14% Similarity=0.165 Sum_probs=79.1
Q ss_pred CceEEEEe-C----CCCceEEEECCCCCCCCC----------hhhHHHHHH---HHhhCCcEEEEecccccC--------
Q 022749 83 PVQVAFKT-G----DYQQQVIFIGGLTDGFFA----------TEYLEPLAI---ALDKERWSLVQFLMTSSY-------- 136 (292)
Q Consensus 83 ~~~~~y~~-g----~~~~~VV~vHG~~~g~~s----------~~~~~~la~---~L~~~Gy~Vi~~~l~~D~-------- 136 (292)
.++++|++ | ...++||+.|+++.+.+. ..+|..++- .|.-..|-||.+|+...-
T Consensus 40 ~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g 119 (389)
T PRK06765 40 DVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVI 119 (389)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCC
Confidence 56788876 2 235899999999853221 234655543 355457999955442110
Q ss_pred --------CCCCCCC---CC-CcHHHHHHHHHHHHHhcCCCcEE-EEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 137 --------TGYGTSS---LQ-QDAMEIDQLISYLINKDNSEGVV-LLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 137 --------~G~G~S~---~~-~~v~Dl~~~i~~l~~~~~~~~vv-LvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
|++|.+. .+ -.++|+.+.+..+.++++.++++ |+||||||++++.+|.+| |++|+++|+++...
T Consensus 120 ~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~---P~~v~~lv~ia~~~ 196 (389)
T PRK06765 120 TTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHY---PHMVERMIGVIGNP 196 (389)
T ss_pred CCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHC---hHhhheEEEEecCC
Confidence 2222211 11 23567666666666778999986 999999999999999999 99999999987643
No 80
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.96 E-value=1e-08 Score=94.71 Aligned_cols=100 Identities=18% Similarity=0.340 Sum_probs=77.7
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCc----HHHHHHHHHHHHHhcCC-CcEE
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQD----AMEIDQLISYLINKDNS-EGVV 168 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~----v~Dl~~~i~~l~~~~~~-~~vv 168 (292)
..+||-+||-. ++..-|+.+...|.+.|+||| +..|||+|.+....+ -.+-..+++.|.++++. ++++
T Consensus 35 ~gTVv~~hGsP---GSH~DFkYi~~~l~~~~iR~I----~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i 107 (297)
T PF06342_consen 35 LGTVVAFHGSP---GSHNDFKYIRPPLDEAGIRFI----GINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLI 107 (297)
T ss_pred ceeEEEecCCC---CCccchhhhhhHHHHcCeEEE----EeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceE
Confidence 34799999988 444446667888999999999 888899998864332 35666677777666554 5789
Q ss_pred EEEeChHHHHHHHHHHHhccCccccceEEEeCCCCCh
Q 022749 169 LLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 169 LvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~ 205 (292)
.+|||+||-.|+.++..+ | +.|++|++|..-+
T Consensus 108 ~~gHSrGcenal~la~~~---~--~~g~~lin~~G~r 139 (297)
T PF06342_consen 108 FLGHSRGCENALQLAVTH---P--LHGLVLINPPGLR 139 (297)
T ss_pred EEEeccchHHHHHHHhcC---c--cceEEEecCCccc
Confidence 999999999999999987 3 6799999986533
No 81
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.96 E-value=2.3e-09 Score=93.54 Aligned_cols=105 Identities=18% Similarity=0.218 Sum_probs=75.4
Q ss_pred EEEECCCCCCCCChhhHHHHHHHHhh-CCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHh-----cCCCcEEEE
Q 022749 97 VIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINK-----DNSEGVVLL 170 (292)
Q Consensus 97 VV~vHG~~~g~~s~~~~~~la~~L~~-~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~-----~~~~~vvLv 170 (292)
||++||-+-...+......++..|.+ .|+.|+ ..|||=......+..++|+.+++++++++ .+.++|+|+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~----~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~ 76 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVV----SIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLI 76 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEE----EEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEE----EeeccccccccccccccccccceeeeccccccccccccceEEe
Confidence 78999966433333334456666664 899999 66667555666777899999999999875 567799999
Q ss_pred EeChHHHHHHHHHHHhccC-ccccceEEEeCCCCCh
Q 022749 171 GHSTGCQDIVHYMRANAAC-SRAVRAAIFQAPVSDR 205 (292)
Q Consensus 171 GHSmGG~ial~ya~~~~~~-p~~V~glIL~aP~~d~ 205 (292)
|+|-||++++.++.+.... ...+++++++.|+.+.
T Consensus 77 G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 77 GDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 9999999999999865221 2358999999998655
No 82
>PRK11460 putative hydrolase; Provisional
Probab=98.95 E-value=6.3e-09 Score=93.70 Aligned_cols=103 Identities=12% Similarity=0.112 Sum_probs=64.0
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCC---CC--CC-----C--CCCCcHH-------HHH
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYT---GY--GT-----S--SLQQDAM-------EID 152 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~---G~--G~-----S--~~~~~v~-------Dl~ 152 (292)
..++.||++||++ .+...|..+++.|.+.++.+..+ .++.+ +. |. . ..+...+ .+.
T Consensus 14 ~~~~~vIlLHG~G---~~~~~~~~l~~~l~~~~~~~~~i--~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~ 88 (232)
T PRK11460 14 PAQQLLLLFHGVG---DNPVAMGEIGSWFAPAFPDALVV--SVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFI 88 (232)
T ss_pred CCCcEEEEEeCCC---CChHHHHHHHHHHHHHCCCCEEE--CCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHH
Confidence 4568999999999 44555778999998765433322 22211 11 11 0 0111122 233
Q ss_pred HHHHHHHHhc--CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 153 QLISYLINKD--NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 153 ~~i~~l~~~~--~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
++++++.++. ..++|+|+|||+||.+++.++.++ ++.+.++|..++.
T Consensus 89 ~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~---~~~~~~vv~~sg~ 137 (232)
T PRK11460 89 ETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAE---PGLAGRVIAFSGR 137 (232)
T ss_pred HHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhC---CCcceEEEEeccc
Confidence 3444444443 346899999999999999999887 7777888877653
No 83
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.94 E-value=1.2e-09 Score=98.21 Aligned_cols=85 Identities=18% Similarity=0.251 Sum_probs=54.5
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCcE---EEEecccccCCCCCCCCC-------CCcHHHHHHHHHHHHHhcCC
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWS---LVQFLMTSSYTGYGTSSL-------QQDAMEIDQLISYLINKDNS 164 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~---Vi~~~l~~D~~G~G~S~~-------~~~v~Dl~~~i~~l~~~~~~ 164 (292)
.|||||||.+++. ..-|..+++.|.++||. |+ +.+|-....... -+.+.+|+++|+.+++.-+.
T Consensus 2 ~PVVlVHG~~~~~--~~~w~~~~~~l~~~GY~~~~vy----a~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa 75 (219)
T PF01674_consen 2 RPVVLVHGTGGNA--YSNWSTLAPYLKAAGYCDSEVY----ALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA 75 (219)
T ss_dssp --EEEE--TTTTT--CGGCCHHHHHHHHTT--CCCEE----EE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT-
T ss_pred CCEEEECCCCcch--hhCHHHHHHHHHHcCCCcceeE----eccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC
Confidence 5899999999533 33466789999999999 78 444432222111 12346788899988877788
Q ss_pred CcEEEEEeChHHHHHHHHHHHh
Q 022749 165 EGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 165 ~~vvLvGHSmGG~ial~ya~~~ 186 (292)
+|-||||||||.++.+|+.-.
T Consensus 76 -kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 76 -KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp --EEEEEETCHHHHHHHHHHHC
T ss_pred -EEEEEEcCCcCHHHHHHHHHc
Confidence 999999999999999998753
No 84
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.91 E-value=1.2e-08 Score=89.93 Aligned_cols=100 Identities=17% Similarity=0.161 Sum_probs=73.1
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCC-CCCCcHHHHH-HHHHHHHHhcCCCcEEEEEe
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS-SLQQDAMEID-QLISYLINKDNSEGVVLLGH 172 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S-~~~~~v~Dl~-~~i~~l~~~~~~~~vvLvGH 172 (292)
++|+++|+.+ ++...|.++++.|....+.|+ .+.++|.+.. .....++++. .+++.++...+..+++|+||
T Consensus 1 ~~lf~~p~~g---G~~~~y~~la~~l~~~~~~v~----~i~~~~~~~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~ 73 (229)
T PF00975_consen 1 RPLFCFPPAG---GSASSYRPLARALPDDVIGVY----GIEYPGRGDDEPPPDSIEELASRYAEAIRARQPEGPYVLAGW 73 (229)
T ss_dssp -EEEEESSTT---CSGGGGHHHHHHHTTTEEEEE----EECSTTSCTTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEE
T ss_pred CeEEEEcCCc---cCHHHHHHHHHhCCCCeEEEE----EEecCCCCCCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehcc
Confidence 4799999998 455556789999986348899 6667888732 2344566653 45566666556669999999
Q ss_pred ChHHHHHHHHHHHhccCccccceEEEeCC
Q 022749 173 STGCQDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 173 SmGG~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
|+||.+|.+.|.+-......|..|+++.+
T Consensus 74 S~Gg~lA~E~A~~Le~~G~~v~~l~liD~ 102 (229)
T PF00975_consen 74 SFGGILAFEMARQLEEAGEEVSRLILIDS 102 (229)
T ss_dssp THHHHHHHHHHHHHHHTT-SESEEEEESC
T ss_pred CccHHHHHHHHHHHHHhhhccCceEEecC
Confidence 99999999999875334567999999873
No 85
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.88 E-value=1.1e-08 Score=100.71 Aligned_cols=90 Identities=16% Similarity=0.169 Sum_probs=70.3
Q ss_pred ChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCC-----CcHHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHH
Q 022749 109 ATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ-----QDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYM 183 (292)
Q Consensus 109 s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~-----~~v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya 183 (292)
...+|..+++.|.+.||.+ ..|++|+|..-.. ..++++.++++.+.++.+.++|+|+||||||.+++.|+
T Consensus 106 ~~~~~~~li~~L~~~GY~~-----~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 106 EVYYFHDMIEQLIKWGYKE-----GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred hHHHHHHHHHHHHHcCCcc-----CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHH
Confidence 4578899999999999765 5677999875432 23578888888887777889999999999999999999
Q ss_pred HHhcc-CccccceEEEeCCCC
Q 022749 184 RANAA-CSRAVRAAIFQAPVS 203 (292)
Q Consensus 184 ~~~~~-~p~~V~glIL~aP~~ 203 (292)
..++. ....|+++|.+|+..
T Consensus 181 ~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 181 SLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HHCCHhHHhHhccEEEECCCC
Confidence 88721 123578899887753
No 86
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.86 E-value=4.1e-09 Score=79.96 Aligned_cols=59 Identities=17% Similarity=0.249 Sum_probs=44.7
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC-CCcHHHHHHHHHHH
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL-QQDAMEIDQLISYL 158 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~-~~~v~Dl~~~i~~l 158 (292)
.+.+|+++||++| +..+ +..+++.|+++||.|+ ++|+||||+|.. ...+.+++++++.+
T Consensus 15 ~k~~v~i~HG~~e--h~~r-y~~~a~~L~~~G~~V~----~~D~rGhG~S~g~rg~~~~~~~~v~D~ 74 (79)
T PF12146_consen 15 PKAVVVIVHGFGE--HSGR-YAHLAEFLAEQGYAVF----AYDHRGHGRSEGKRGHIDSFDDYVDDL 74 (79)
T ss_pred CCEEEEEeCCcHH--HHHH-HHHHHHHHHhCCCEEE----EECCCcCCCCCCcccccCCHHHHHHHH
Confidence 3789999999997 4444 5689999999999999 889999999974 22344444555444
No 87
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.82 E-value=5.8e-09 Score=91.66 Aligned_cols=86 Identities=24% Similarity=0.275 Sum_probs=66.3
Q ss_pred HHHHHHhhCCcEEEEecccccCCCCCCCC-----------CCCcHHHHHHHHHHHHHh--cCCCcEEEEEeChHHHHHHH
Q 022749 115 PLAIALDKERWSLVQFLMTSSYTGYGTSS-----------LQQDAMEIDQLISYLINK--DNSEGVVLLGHSTGCQDIVH 181 (292)
Q Consensus 115 ~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~-----------~~~~v~Dl~~~i~~l~~~--~~~~~vvLvGHSmGG~ial~ 181 (292)
..+..|+++||.|+ ..|+||.+... ...+++|+.+++++++++ .+.++|.|+|||+||.+++.
T Consensus 5 ~~~~~la~~Gy~v~----~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~ 80 (213)
T PF00326_consen 5 WNAQLLASQGYAVL----VPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALL 80 (213)
T ss_dssp HHHHHHHTTT-EEE----EEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHH
T ss_pred HHHHHHHhCCEEEE----EEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccch
Confidence 45678888999999 66778876321 123578899999999765 34579999999999999999
Q ss_pred HHHHhccCccccceEEEeCCCCChhh
Q 022749 182 YMRANAACSRAVRAAIFQAPVSDREY 207 (292)
Q Consensus 182 ya~~~~~~p~~V~glIL~aP~~d~~~ 207 (292)
.+.++ |++++++|..+|+.+...
T Consensus 81 ~~~~~---~~~f~a~v~~~g~~d~~~ 103 (213)
T PF00326_consen 81 AATQH---PDRFKAAVAGAGVSDLFS 103 (213)
T ss_dssp HHHHT---CCGSSEEEEESE-SSTTC
T ss_pred hhccc---ceeeeeeeccceecchhc
Confidence 99988 899999999999877554
No 88
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.82 E-value=1.5e-08 Score=92.52 Aligned_cols=106 Identities=18% Similarity=0.238 Sum_probs=82.3
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHh----------
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINK---------- 161 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~---------- 161 (292)
+.-|+|+|+||+. ...+|+.++..+++..||-|+++++... .+ .+..+++++...+++|+.+.
T Consensus 44 G~yPVilF~HG~~---l~ns~Ys~lL~HIASHGfIVVAPQl~~~---~~-p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~ 116 (307)
T PF07224_consen 44 GTYPVILFLHGFN---LYNSFYSQLLAHIASHGFIVVAPQLYTL---FP-PDGQDEIKSAASVINWLPEGLQHVLPENVE 116 (307)
T ss_pred CCccEEEEeechh---hhhHHHHHHHHHHhhcCeEEEechhhcc---cC-CCchHHHHHHHHHHHHHHhhhhhhCCCCcc
Confidence 4568999999998 6677888999999999999998776322 22 23345677888888988532
Q ss_pred cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCCh
Q 022749 162 DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 162 ~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~ 205 (292)
-+..++.|+|||.||-.|..+|..|. ..-.+.+||-+.|+...
T Consensus 117 ~nl~klal~GHSrGGktAFAlALg~a-~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 117 ANLSKLALSGHSRGGKTAFALALGYA-TSLKFSALIGIDPVAGT 159 (307)
T ss_pred cccceEEEeecCCccHHHHHHHhccc-ccCchhheecccccCCC
Confidence 25779999999999999999998873 24468899999887543
No 89
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.75 E-value=4.1e-08 Score=95.28 Aligned_cols=121 Identities=17% Similarity=0.202 Sum_probs=74.6
Q ss_pred eEEEEeCCCCceEEEEe--CC-CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHH
Q 022749 74 GVLFKYGPKPVQVAFKT--GD-YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAME 150 (292)
Q Consensus 74 g~l~~y~~~~~~~~y~~--g~-~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~D 150 (292)
...+.|....+..++.- ++ ..|+||++.|+- + ....++..+.++|..+|+.++ ..|.||.|.+......+|
T Consensus 167 ~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlD-s-~qeD~~~l~~~~l~~rGiA~L----tvDmPG~G~s~~~~l~~D 240 (411)
T PF06500_consen 167 EVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLD-S-LQEDLYRLFRDYLAPRGIAML----TVDMPGQGESPKWPLTQD 240 (411)
T ss_dssp EEEEEETTCEEEEEEEESSSSS-EEEEEEE--TT-S--GGGGHHHHHCCCHHCT-EEE----EE--TTSGGGTTT-S-S-
T ss_pred EEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcc-h-hHHHHHHHHHHHHHhCCCEEE----EEccCCCcccccCCCCcC
Confidence 44555555444433332 22 346666667764 3 334556555567888999999 666699999853222222
Q ss_pred ----HHHHHHHHHHh--cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 151 ----IDQLISYLINK--DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 151 ----l~~~i~~l~~~--~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
..+++++|.+. .+..+|.++|-|+||.+|++.|..+ +.+|+++|.++|+.
T Consensus 241 ~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le---~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 241 SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE---DPRLKAVVALGAPV 296 (411)
T ss_dssp CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT---TTT-SEEEEES---
T ss_pred HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc---ccceeeEeeeCchH
Confidence 56777887642 3566999999999999999998876 78999999999864
No 90
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.71 E-value=8.9e-08 Score=82.86 Aligned_cols=90 Identities=19% Similarity=0.279 Sum_probs=58.3
Q ss_pred EEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhc--CCCcEEEEEeCh
Q 022749 97 VIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKD--NSEGVVLLGHST 174 (292)
Q Consensus 97 VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~--~~~~vvLvGHSm 174 (292)
|++|||++.+.. ..++..+.+.|... ++|-+.++ | --+++++++.+.+.. -.++++|||||+
T Consensus 1 v~IvhG~~~s~~-~HW~~wl~~~l~~~-~~V~~~~~--~------------~P~~~~W~~~l~~~i~~~~~~~ilVaHSL 64 (171)
T PF06821_consen 1 VLIVHGYGGSPP-DHWQPWLERQLENS-VRVEQPDW--D------------NPDLDEWVQALDQAIDAIDEPTILVAHSL 64 (171)
T ss_dssp EEEE--TTSSTT-TSTHHHHHHHHTTS-EEEEEC----T------------S--HHHHHHHHHHCCHC-TTTEEEEEETH
T ss_pred CEEeCCCCCCCc-cHHHHHHHHhCCCC-eEEecccc--C------------CCCHHHHHHHHHHHHhhcCCCeEEEEeCH
Confidence 789999986432 22345678888875 77774433 1 125555666654431 245799999999
Q ss_pred HHHHHHHHH-HHhccCccccceEEEeCCCCCh
Q 022749 175 GCQDIVHYM-RANAACSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 175 GG~ial~ya-~~~~~~p~~V~glIL~aP~~d~ 205 (292)
||..+++|+ .+. ..+|+|++|+||....
T Consensus 65 Gc~~~l~~l~~~~---~~~v~g~lLVAp~~~~ 93 (171)
T PF06821_consen 65 GCLTALRWLAEQS---QKKVAGALLVAPFDPD 93 (171)
T ss_dssp HHHHHHHHHHHTC---CSSEEEEEEES--SCG
T ss_pred HHHHHHHHHhhcc---cccccEEEEEcCCCcc
Confidence 999999999 444 7899999999998653
No 91
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.70 E-value=1.4e-07 Score=86.94 Aligned_cols=105 Identities=20% Similarity=0.308 Sum_probs=75.7
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhC---CcEEEEecccccCCCCCCCCCC------CcH----HHHHHHHHHHH-
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKE---RWSLVQFLMTSSYTGYGTSSLQ------QDA----MEIDQLISYLI- 159 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~---Gy~Vi~~~l~~D~~G~G~S~~~------~~v----~Dl~~~i~~l~- 159 (292)
+..||||.|.. +-..|+.++.+.|.+. .|.|+ +.++.||-..... ... ++|+..++.+.
T Consensus 2 ~~li~~IPGNP---Glv~fY~~Fl~~L~~~l~~~~~i~----~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~ 74 (266)
T PF10230_consen 2 RPLIVFIPGNP---GLVEFYEEFLSALYEKLNPQFEIL----GISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKE 74 (266)
T ss_pred cEEEEEECCCC---ChHHHHHHHHHHHHHhCCCCCeeE----EecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHH
Confidence 46799999988 5577888888888744 78999 8888999755432 122 33443333333
Q ss_pred --Hhc--CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCCh
Q 022749 160 --NKD--NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 160 --~~~--~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~ 205 (292)
.+. ...+++|+|||+|+.++++.+.+......+|.+++++-|....
T Consensus 75 ~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 75 LIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred HhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 222 5678999999999999999999982122789999999986433
No 92
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.70 E-value=4.3e-08 Score=87.53 Aligned_cols=104 Identities=19% Similarity=0.332 Sum_probs=81.3
Q ss_pred CCCCceEEEECCCCCCCCChhhHHHHHHH-HhhCCcEEEEecccccCCCCCCCCCC----CcHHHHHHHHHHHHHh--cC
Q 022749 91 GDYQQQVIFIGGLTDGFFATEYLEPLAIA-LDKERWSLVQFLMTSSYTGYGTSSLQ----QDAMEIDQLISYLINK--DN 163 (292)
Q Consensus 91 g~~~~~VV~vHG~~~g~~s~~~~~~la~~-L~~~Gy~Vi~~~l~~D~~G~G~S~~~----~~v~Dl~~~i~~l~~~--~~ 163 (292)
...+|++++.||..+++ .+.-++++- +.+.+..|+ .++|||+|.|... ...-|-+++++++..+ +.
T Consensus 75 E~S~pTlLyfh~NAGNm---Ghr~~i~~~fy~~l~mnv~----ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~~d 147 (300)
T KOG4391|consen 75 ESSRPTLLYFHANAGNM---GHRLPIARVFYVNLKMNVL----IVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPDLD 147 (300)
T ss_pred cCCCceEEEEccCCCcc---cchhhHHHHHHHHcCceEE----EEEeeccccCCCCccccceeccHHHHHHHHhcCccCC
Confidence 35789999999988543 333344543 345678888 7888999998643 2356889999999754 46
Q ss_pred CCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 164 SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 164 ~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
..+++|+|.|+||.+|++.|.+. .+++.++|+-.....
T Consensus 148 ktkivlfGrSlGGAvai~lask~---~~ri~~~ivENTF~S 185 (300)
T KOG4391|consen 148 KTKIVLFGRSLGGAVAIHLASKN---SDRISAIIVENTFLS 185 (300)
T ss_pred cceEEEEecccCCeeEEEeeccc---hhheeeeeeechhcc
Confidence 77999999999999999999998 789999999887643
No 93
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.68 E-value=1.4e-07 Score=85.50 Aligned_cols=110 Identities=16% Similarity=0.239 Sum_probs=72.6
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCc--EEEEecccccCCCCCCCC-CCC-------cHHHHHHHHHHHHHh
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERW--SLVQFLMTSSYTGYGTSS-LQQ-------DAMEIDQLISYLINK 161 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy--~Vi~~~l~~D~~G~G~S~-~~~-------~v~Dl~~~i~~l~~~ 161 (292)
+.+.++|||||+.-.+. .-....++.....+| .++ .+++|..|.-. ... ...++..+++.|.+.
T Consensus 16 ~~~~vlvfVHGyn~~f~--~a~~r~aql~~~~~~~~~~i----~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~ 89 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFE--DALRRAAQLAHDLGFPGVVI----LFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARA 89 (233)
T ss_pred CCCeEEEEEeCCCCCHH--HHHHHHHHHHHHhCCCceEE----EEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhc
Confidence 45789999999984321 112233333333334 466 67778777521 111 135577777777665
Q ss_pred cCCCcEEEEEeChHHHHHHHHHHHhccC------ccccceEEEeCCCCChhh
Q 022749 162 DNSEGVVLLGHSTGCQDIVHYMRANAAC------SRAVRAAIFQAPVSDREY 207 (292)
Q Consensus 162 ~~~~~vvLvGHSmGG~ial~ya~~~~~~------p~~V~glIL~aP~~d~~~ 207 (292)
.+.++|+|++||||+.+.+..+...... ..+|+.+||++|-.+.+.
T Consensus 90 ~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 90 PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHH
Confidence 5789999999999999999987653211 237889999999877654
No 94
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.65 E-value=2e-07 Score=88.80 Aligned_cols=114 Identities=18% Similarity=0.252 Sum_probs=80.2
Q ss_pred CceEEEEeC-----CCCceEEEECCCCCCCCChh--------hHHHHHH---HHhhCCcEEEEecccccCCCCC--CCC-
Q 022749 83 PVQVAFKTG-----DYQQQVIFIGGLTDGFFATE--------YLEPLAI---ALDKERWSLVQFLMTSSYTGYG--TSS- 143 (292)
Q Consensus 83 ~~~~~y~~g-----~~~~~VV~vHG~~~g~~s~~--------~~~~la~---~L~~~Gy~Vi~~~l~~D~~G~G--~S~- 143 (292)
...++|++- ...++||++||++.+.+... +|+.++. .+.-..|-|| +.+-.|.+ .+.
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvI----c~NvlG~c~GStgP 110 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVI----CTNVLGGCKGSTGP 110 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEE----EecCCCCCCCCCCC
Confidence 455777652 23678999999996444433 6766542 3444468898 66656654 221
Q ss_pred --CC------------CcHHHHHHHHHHHHHhcCCCcEE-EEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 144 --LQ------------QDAMEIDQLISYLINKDNSEGVV-LLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 144 --~~------------~~v~Dl~~~i~~l~~~~~~~~vv-LvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
.. -.++|+..+-+.|.+++|++++. +||-||||+.++.|+..| |++|+.+|.++...
T Consensus 111 ~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~y---Pd~V~~~i~ia~~~ 182 (368)
T COG2021 111 SSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRY---PDRVRRAIPIATAA 182 (368)
T ss_pred CCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhC---hHHHhhhheecccc
Confidence 11 12566655556677888999997 999999999999999999 99999998887643
No 95
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.65 E-value=1.2e-07 Score=95.23 Aligned_cols=107 Identities=9% Similarity=0.090 Sum_probs=79.7
Q ss_pred CCceEEEECCCCCCCCCh--hhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC----CCcHHHHHHHHHHHHHhcCCCc
Q 022749 93 YQQQVIFIGGLTDGFFAT--EYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL----QQDAMEIDQLISYLINKDNSEG 166 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~--~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~----~~~v~Dl~~~i~~l~~~~~~~~ 166 (292)
.+++||+|+.+.-.++-. .--+.++++|.++||.|+ .+|.++-+.... ++.++.+.++++.+++..+.++
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~Vf----lIsW~nP~~~~r~~~ldDYv~~i~~Ald~V~~~tG~~~ 289 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVF----IISWRNPDKAHREWGLSTYVDALKEAVDAVRAITGSRD 289 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEE----EEeCCCCChhhcCCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 478999999987211110 001468899999999999 666676665432 3445677788888877778899
Q ss_pred EEEEEeChHHHHHHH----HHHHhccCcc-ccceEEEeCCCCChh
Q 022749 167 VVLLGHSTGCQDIVH----YMRANAACSR-AVRAAIFQAPVSDRE 206 (292)
Q Consensus 167 vvLvGHSmGG~ial~----ya~~~~~~p~-~V~glIL~aP~~d~~ 206 (292)
|.++||+|||.++.. |++++ ++ +|+.++++++..|..
T Consensus 290 vnl~GyC~GGtl~a~~~a~~aA~~---~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 290 LNLLGACAGGLTCAALVGHLQALG---QLRKVNSLTYLVSLLDST 331 (560)
T ss_pred eeEEEECcchHHHHHHHHHHHhcC---CCCceeeEEeeecccccC
Confidence 999999999999996 67766 64 799999988876644
No 96
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.65 E-value=4.1e-08 Score=90.21 Aligned_cols=106 Identities=19% Similarity=0.226 Sum_probs=65.5
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHh-hCCcE--EEEecccccCCCC----CC----CC----------CC-----C
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALD-KERWS--LVQFLMTSSYTGY----GT----SS----------LQ-----Q 146 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~-~~Gy~--Vi~~~l~~D~~G~----G~----S~----------~~-----~ 146 (292)
...|.|||||++.+. .-+..+++.|. +.|+. ++.++ .+--|. |. .. -. .
T Consensus 10 ~~tPTifihG~~gt~---~s~~~mi~~~~~~~~~~~~~l~v~--V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~ 84 (255)
T PF06028_consen 10 STTPTIFIHGYGGTA---NSFNHMINRLENKQGVAQKVLTVT--VSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKK 84 (255)
T ss_dssp S-EEEEEE--TTGGC---CCCHHHHHHHHHCSTS-S-EEEEE--EETTSEEEEES---TT-SS-EEEEEESSTT-CHHHH
T ss_pred CCCcEEEECCCCCCh---hHHHHHHHHHHhhcCCCceEEEEE--ECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHH
Confidence 467999999999543 33567889997 66643 43322 122221 21 00 01 1
Q ss_pred cHHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCc--cccceEEEeCCCC
Q 022749 147 DAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACS--RAVRAAIFQAPVS 203 (292)
Q Consensus 147 ~v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p--~~V~glIL~aP~~ 203 (292)
..+-+..++.+|+++++.+++-+|||||||.+++.|+.++...+ ++|.++|.+|...
T Consensus 85 qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pf 143 (255)
T PF06028_consen 85 QAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPF 143 (255)
T ss_dssp HHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--T
T ss_pred HHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEecccc
Confidence 23457778888888899999999999999999999999974222 3689999987643
No 97
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.63 E-value=2.8e-07 Score=80.81 Aligned_cols=105 Identities=16% Similarity=0.184 Sum_probs=80.0
Q ss_pred CCCceEEEECC--CCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCC-----CcHHHHHHHHHHHHHhcCC
Q 022749 92 DYQQQVIFIGG--LTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ-----QDAMEIDQLISYLINKDNS 164 (292)
Q Consensus 92 ~~~~~VV~vHG--~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~-----~~v~Dl~~~i~~l~~~~~~ 164 (292)
+..++.|++|- +.+|.....-...++..|.++||.++ ++|+||-|.|.-. ...+|..++++|++++++.
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atl----RfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~ 101 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATL----RFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPD 101 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEE----eecccccccccCcccCCcchHHHHHHHHHHHHhhCCC
Confidence 34567777765 33333455556789999999999999 8888999998643 3478999999999987776
Q ss_pred CcE-EEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 165 EGV-VLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 165 ~~v-vLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
.+. .|.|.|.|+.|++..|.+. + .+...|-++|...
T Consensus 102 s~~~~l~GfSFGa~Ia~~la~r~---~-e~~~~is~~p~~~ 138 (210)
T COG2945 102 SASCWLAGFSFGAYIAMQLAMRR---P-EILVFISILPPIN 138 (210)
T ss_pred chhhhhcccchHHHHHHHHHHhc---c-cccceeeccCCCC
Confidence 666 7889999999999999986 3 4666666655443
No 98
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.62 E-value=3e-07 Score=85.80 Aligned_cols=111 Identities=12% Similarity=0.032 Sum_probs=83.6
Q ss_pred CCceEEEECCCCCCCCChhhH-HHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHh-----cCCCc
Q 022749 93 YQQQVIFIGGLTDGFFATEYL-EPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINK-----DNSEG 166 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~-~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~-----~~~~~ 166 (292)
..|+||++||-+--....+.. ..++..+...|+.|+ ..|||---+...+..++|+.+.+.+++++ .+.++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv----~vdYrlaPe~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVV----SVDYRLAPEHPFPAALEDAYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEE----ecCCCCCCCCCCCchHHHHHHHHHHHHhhhHhhCCCccc
Confidence 478999999966322333333 456666677899999 77778766667888899999999998754 23678
Q ss_pred EEEEEeChHHHHHHHHHHHhccC-ccccceEEEeCCCCChhh
Q 022749 167 VVLLGHSTGCQDIVHYMRANAAC-SRAVRAAIFQAPVSDREY 207 (292)
Q Consensus 167 vvLvGHSmGG~ial~ya~~~~~~-p~~V~glIL~aP~~d~~~ 207 (292)
|+|+|+|.||++++.++..-... .....+.+++.|+.+...
T Consensus 154 i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 154 IAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred eEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 99999999999999998875111 125789999999877654
No 99
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.62 E-value=1.5e-07 Score=83.14 Aligned_cols=99 Identities=18% Similarity=0.222 Sum_probs=68.9
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCC--CCCCC---------------CcHHHHHHHH
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYG--TSSLQ---------------QDAMEIDQLI 155 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G--~S~~~---------------~~v~Dl~~~i 155 (292)
..+.||++|++.+ -....+.+++.|+++||.|+.+|+ +.|.+ ..... ...+|+.+.+
T Consensus 13 ~~~~Vvv~~d~~G---~~~~~~~~ad~lA~~Gy~v~~pD~---f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~ 86 (218)
T PF01738_consen 13 PRPAVVVIHDIFG---LNPNIRDLADRLAEEGYVVLAPDL---FGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAV 86 (218)
T ss_dssp SEEEEEEE-BTTB---S-HHHHHHHHHHHHTT-EEEEE-C---CCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCC---CchHHHHHHHHHHhcCCCEEeccc---ccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4689999999883 236667899999999999997765 22333 11110 1235677778
Q ss_pred HHHHHhc--CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCC
Q 022749 156 SYLINKD--NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 156 ~~l~~~~--~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
++|+++. +.++|.++|.|+||.+++.++.+. ..++++|..=|
T Consensus 87 ~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~----~~~~a~v~~yg 130 (218)
T PF01738_consen 87 DYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD----PRVDAAVSFYG 130 (218)
T ss_dssp HHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT----TTSSEEEEES-
T ss_pred HHHHhccccCCCcEEEEEEecchHHhhhhhhhc----cccceEEEEcC
Confidence 8887542 357999999999999999987763 57999988766
No 100
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.60 E-value=5.9e-07 Score=78.91 Aligned_cols=92 Identities=15% Similarity=0.134 Sum_probs=60.6
Q ss_pred EEEECCCCCCCCChhhHHHHHHHHhhCCc--EEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEEeCh
Q 022749 97 VIFIGGLTDGFFATEYLEPLAIALDKERW--SLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHST 174 (292)
Q Consensus 97 VV~vHG~~~g~~s~~~~~~la~~L~~~Gy--~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGHSm 174 (292)
|+++|||..+..+... ..+.+++++.+. .+. ..+++ ...++..+.++.+.++...+.++|+|+||
T Consensus 2 ilYlHGF~Ssp~S~Ka-~~l~~~~~~~~~~~~~~----~p~l~--------~~p~~a~~~l~~~i~~~~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKA-QALKQYFAEHGPDIQYP----CPDLP--------PFPEEAIAQLEQLIEELKPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHH-HHHHHHHHHhCCCceEE----CCCCC--------cCHHHHHHHHHHHHHhCCCCCeEEEEECh
Confidence 7999999966555444 356777876553 344 22322 23334434444444444555699999999
Q ss_pred HHHHHHHHHHHhccCccccceEEEeCCCCChhh
Q 022749 175 GCQDIVHYMRANAACSRAVRAAIFQAPVSDREY 207 (292)
Q Consensus 175 GG~ial~ya~~~~~~p~~V~glIL~aP~~d~~~ 207 (292)
||..|.+++.++ + +++ ||++|...+..
T Consensus 69 GG~~A~~La~~~---~--~~a-vLiNPav~p~~ 95 (187)
T PF05728_consen 69 GGFYATYLAERY---G--LPA-VLINPAVRPYE 95 (187)
T ss_pred HHHHHHHHHHHh---C--CCE-EEEcCCCCHHH
Confidence 999999999887 3 444 89999887654
No 101
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.49 E-value=7.3e-07 Score=97.41 Aligned_cols=102 Identities=14% Similarity=-0.005 Sum_probs=73.6
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC-CCcHHHHHHHH-HHHHHhcCCCcEEEE
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL-QQDAMEIDQLI-SYLINKDNSEGVVLL 170 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~-~~~v~Dl~~~i-~~l~~~~~~~~vvLv 170 (292)
.+++|+++||++ .....|..+++.|.+ +++|+ ..+.+|+|.... ...++++.+.+ +.+.+.....+++|+
T Consensus 1067 ~~~~l~~lh~~~---g~~~~~~~l~~~l~~-~~~v~----~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~~~~~p~~l~ 1138 (1296)
T PRK10252 1067 DGPTLFCFHPAS---GFAWQFSVLSRYLDP-QWSIY----GIQSPRPDGPMQTATSLDEVCEAHLATLLEQQPHGPYHLL 1138 (1296)
T ss_pred CCCCeEEecCCC---CchHHHHHHHHhcCC-CCcEE----EEECCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCEEEE
Confidence 457899999999 445667889999975 79999 666799986532 23444444332 333322344689999
Q ss_pred EeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 171 GHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 171 GHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
||||||.++.++|.+....+.+|..++++++.
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 99999999999998753347789999998753
No 102
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.48 E-value=1.3e-06 Score=79.25 Aligned_cols=99 Identities=15% Similarity=0.140 Sum_probs=73.0
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCC--CCCC--------------CCCcHHHHHHHHHHH
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGY--GTSS--------------LQQDAMEIDQLISYL 158 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~--G~S~--------------~~~~v~Dl~~~i~~l 158 (292)
|.||++|+.. +-..+.+.+++.|+++||.|+++|+-. ..|- ...+ ......|+.+.+++|
T Consensus 28 P~VIv~hei~---Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L 103 (236)
T COG0412 28 PGVIVLHEIF---GLNPHIRDVARRLAKAGYVVLAPDLYG-RQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYL 103 (236)
T ss_pred CEEEEEeccc---CCchHHHHHHHHHHhCCcEEEechhhc-cCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHH
Confidence 8999999988 345578899999999999999777522 1111 1110 012357889999998
Q ss_pred HHh--cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCC
Q 022749 159 INK--DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 159 ~~~--~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
..+ ...++|.++|.||||.+++.++.+. | .|++.|..=|
T Consensus 104 ~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~---~-~v~a~v~fyg 144 (236)
T COG0412 104 ARQPQVDPKRIGVVGFCMGGGLALLAATRA---P-EVKAAVAFYG 144 (236)
T ss_pred HhCCCCCCceEEEEEEcccHHHHHHhhccc---C-CccEEEEecC
Confidence 653 2367899999999999999999875 3 7888887544
No 103
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.46 E-value=4.6e-07 Score=87.75 Aligned_cols=103 Identities=18% Similarity=0.214 Sum_probs=59.6
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCC-CCC------------C-------------CC
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGY-GTS------------S-------------LQ 145 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~-G~S------------~-------------~~ 145 (292)
+.-|+|||-||++. ....+..++..|+.+||-|+ +.+||-. +-. . ..
T Consensus 98 ~~~PvvIFSHGlgg---~R~~yS~~~~eLAS~GyVV~----aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (379)
T PF03403_consen 98 GKFPVVIFSHGLGG---SRTSYSAICGELASHGYVVA----AIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLR 170 (379)
T ss_dssp S-EEEEEEE--TT-----TTTTHHHHHHHHHTT-EEE----EE---SS-SSEEEE-SSHHHHHHT---------EEEE--
T ss_pred CCCCEEEEeCCCCc---chhhHHHHHHHHHhCCeEEE----EeccCCCceeEEEeccCCCccccccccccccccceeccc
Confidence 34589999999994 33334578899999999999 4455521 100 0 00
Q ss_pred ----C------------cHHHHHHHHHHHHH----------------------hcCCCcEEEEEeChHHHHHHHHHHHhc
Q 022749 146 ----Q------------DAMEIDQLISYLIN----------------------KDNSEGVVLLGHSTGCQDIVHYMRANA 187 (292)
Q Consensus 146 ----~------------~v~Dl~~~i~~l~~----------------------~~~~~~vvLvGHSmGG~ial~ya~~~~ 187 (292)
. -+.|+..+++.|.+ +++..+|.++|||.||..++..+.+
T Consensus 171 ~~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~-- 248 (379)
T PF03403_consen 171 DFDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQ-- 248 (379)
T ss_dssp ---GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhh--
Confidence 0 03455566665532 1235679999999999999987776
Q ss_pred cCccccceEEEeCCCCCh
Q 022749 188 ACSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 188 ~~p~~V~glIL~aP~~d~ 205 (292)
..++++.|++.|+..+
T Consensus 249 --d~r~~~~I~LD~W~~P 264 (379)
T PF03403_consen 249 --DTRFKAGILLDPWMFP 264 (379)
T ss_dssp ---TT--EEEEES---TT
T ss_pred --ccCcceEEEeCCcccC
Confidence 4789999999887654
No 104
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.42 E-value=2e-06 Score=79.21 Aligned_cols=102 Identities=17% Similarity=0.094 Sum_probs=78.4
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCC-CCCCCcHHHH-HHHHHHHHHhcCCCcEEEEEe
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGT-SSLQQDAMEI-DQLISYLINKDNSEGVVLLGH 172 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~-S~~~~~v~Dl-~~~i~~l~~~~~~~~vvLvGH 172 (292)
++|.++|+.+ +....|.+|+..|... +.|+ ..+.+|+|. .......+|+ +..++.+++..+..+++|+||
T Consensus 1 ~pLF~fhp~~---G~~~~~~~L~~~l~~~-~~v~----~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~ 72 (257)
T COG3319 1 PPLFCFHPAG---GSVLAYAPLAAALGPL-LPVY----GLQAPGYGAGEQPFASLDDMAAAYVAAIRRVQPEGPYVLLGW 72 (257)
T ss_pred CCEEEEcCCC---CcHHHHHHHHHHhccC-ceee----ccccCcccccccccCCHHHHHHHHHHHHHHhCCCCCEEEEee
Confidence 5789999988 4455677899999874 8999 778899974 2233445554 556677777778889999999
Q ss_pred ChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 173 STGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 173 SmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
|+||.+|...|.+-....+.|.-|+++-+...
T Consensus 73 S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 73 SLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999999875444568899998876655
No 105
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.42 E-value=1.5e-06 Score=89.08 Aligned_cols=100 Identities=17% Similarity=0.235 Sum_probs=72.9
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCC---CCCC--C------CCCcHHHHHHHHHHHHHh--
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTG---YGTS--S------LQQDAMEIDQLISYLINK-- 161 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G---~G~S--~------~~~~v~Dl~~~i~~l~~~-- 161 (292)
|+||++||-........ +....+.|+.+||.|+ ..++|| +|+. . ...+.+|+.+.++++.+.
T Consensus 395 P~i~~~hGGP~~~~~~~-~~~~~q~~~~~G~~V~----~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~ 469 (620)
T COG1506 395 PLIVYIHGGPSAQVGYS-FNPEIQVLASAGYAVL----APNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPL 469 (620)
T ss_pred CEEEEeCCCCccccccc-cchhhHHHhcCCeEEE----EeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCC
Confidence 78999999765443333 3456788888999999 566675 4432 1 235688999999976543
Q ss_pred cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 162 DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 162 ~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
.+.+++.++|||+||.+++..+.+. + .+++.|...+..
T Consensus 470 ~d~~ri~i~G~SyGGymtl~~~~~~---~-~f~a~~~~~~~~ 507 (620)
T COG1506 470 VDPERIGITGGSYGGYMTLLAATKT---P-RFKAAVAVAGGV 507 (620)
T ss_pred cChHHeEEeccChHHHHHHHHHhcC---c-hhheEEeccCcc
Confidence 2345899999999999999988876 5 788877776644
No 106
>PRK10115 protease 2; Provisional
Probab=98.42 E-value=2.3e-06 Score=88.73 Aligned_cols=108 Identities=11% Similarity=0.023 Sum_probs=81.4
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCC-----------CCCcHHHHHHHHHHHHH
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS-----------LQQDAMEIDQLISYLIN 160 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~-----------~~~~v~Dl~~~i~~l~~ 160 (292)
+..|+||++||-.+.. ....|......|.++||.|+.++ +||-|.-. ...+++|+.+++++|.+
T Consensus 443 ~~~P~ll~~hGg~~~~-~~p~f~~~~~~l~~rG~~v~~~n----~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~ 517 (686)
T PRK10115 443 GHNPLLVYGYGSYGAS-IDADFSFSRLSLLDRGFVYAIVH----VRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLK 517 (686)
T ss_pred CCCCEEEEEECCCCCC-CCCCccHHHHHHHHCCcEEEEEE----cCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHH
Confidence 3468999999965322 22334455567777899999554 47643221 33678999999999976
Q ss_pred h--cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChhh
Q 022749 161 K--DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREY 207 (292)
Q Consensus 161 ~--~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~~ 207 (292)
+ ...+++.++|-|.||.++...+.++ |+.++++|...|+.|...
T Consensus 518 ~g~~d~~rl~i~G~S~GG~l~~~~~~~~---Pdlf~A~v~~vp~~D~~~ 563 (686)
T PRK10115 518 LGYGSPSLCYGMGGSAGGMLMGVAINQR---PELFHGVIAQVPFVDVVT 563 (686)
T ss_pred cCCCChHHeEEEEECHHHHHHHHHHhcC---hhheeEEEecCCchhHhh
Confidence 4 2457899999999999999988888 999999999999888653
No 107
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.41 E-value=2.4e-07 Score=82.04 Aligned_cols=112 Identities=18% Similarity=0.229 Sum_probs=79.0
Q ss_pred CCceEEEEe-CCCCceEEEECCCCCCCCChhhHHHHHHHHhh-CCcEEEEecccccCCCCCCCCCCCc-------HHHHH
Q 022749 82 KPVQVAFKT-GDYQQQVIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGYGTSSLQQD-------AMEID 152 (292)
Q Consensus 82 ~~~~~~y~~-g~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~-~Gy~Vi~~~l~~D~~G~G~S~~~~~-------v~Dl~ 152 (292)
+++++.|.. |.....|+++.|.-+. ...-|.+....|.+ .-+.++ ++|.||||.|..++. .+|.+
T Consensus 29 ng~ql~y~~~G~G~~~iLlipGalGs--~~tDf~pql~~l~k~l~~Tiv----awDPpGYG~SrPP~Rkf~~~ff~~Da~ 102 (277)
T KOG2984|consen 29 NGTQLGYCKYGHGPNYILLIPGALGS--YKTDFPPQLLSLFKPLQVTIV----AWDPPGYGTSRPPERKFEVQFFMKDAE 102 (277)
T ss_pred cCceeeeeecCCCCceeEeccccccc--ccccCCHHHHhcCCCCceEEE----EECCCCCCCCCCCcccchHHHHHHhHH
Confidence 445566654 4445689999997632 22234444444433 337888 899999999976542 24555
Q ss_pred HHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 153 QLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 153 ~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
..++-. +.+..+++-|+|+|-||..++..|+++ ++.|.++|+.+...
T Consensus 103 ~avdLM-~aLk~~~fsvlGWSdGgiTalivAak~---~e~v~rmiiwga~a 149 (277)
T KOG2984|consen 103 YAVDLM-EALKLEPFSVLGWSDGGITALIVAAKG---KEKVNRMIIWGAAA 149 (277)
T ss_pred HHHHHH-HHhCCCCeeEeeecCCCeEEEEeeccC---hhhhhhheeecccc
Confidence 555443 345789999999999999999999999 99999999988753
No 108
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.40 E-value=1e-06 Score=84.03 Aligned_cols=102 Identities=21% Similarity=0.303 Sum_probs=73.6
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcE---EEEecccccCCCC-CCCCCCCcHHHHHHHHHHHHHhcCCCcEEE
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWS---LVQFLMTSSYTGY-GTSSLQQDAMEIDQLISYLINKDNSEGVVL 169 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~---Vi~~~l~~D~~G~-G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvL 169 (292)
..++|++||+.. ....+..+...+...||. ++ ..++++. +..+.....+.+...++.+..+.+.+++.|
T Consensus 59 ~~pivlVhG~~~---~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~L 131 (336)
T COG1075 59 KEPIVLVHGLGG---GYGNFLPLDYRLAILGWLTNGVY----AFELSGGDGTYSLAVRGEQLFAYVDEVLAKTGAKKVNL 131 (336)
T ss_pred CceEEEEccCcC---CcchhhhhhhhhcchHHHhcccc----cccccccCCCccccccHHHHHHHHHHHHhhcCCCceEE
Confidence 459999999863 334456666667777777 77 4444533 222334456777777777766678899999
Q ss_pred EEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 170 LGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 170 vGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
+||||||.++.+|+... ..+.+|+.++.+++..
T Consensus 132 igHS~GG~~~ry~~~~~-~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 132 IGHSMGGLDSRYYLGVL-GGANRVASVVTLGTPH 164 (336)
T ss_pred EeecccchhhHHHHhhc-CccceEEEEEEeccCC
Confidence 99999999999888887 1127899999888754
No 109
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.38 E-value=6.9e-07 Score=80.50 Aligned_cols=82 Identities=18% Similarity=0.280 Sum_probs=63.2
Q ss_pred eEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC-----------cHHHHHHHHHHHHHhcCC
Q 022749 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ-----------DAMEIDQLISYLINKDNS 164 (292)
Q Consensus 96 ~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~-----------~v~Dl~~~i~~l~~~~~~ 164 (292)
-|+.-.+.+ ....|++.+|..++++||.|. .+||||.|.|+... .-.|+.+.++.+++..+.
T Consensus 32 ~~~va~a~G---v~~~fYRrfA~~a~~~Gf~Vl----t~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~ 104 (281)
T COG4757 32 RLVVAGATG---VGQYFYRRFAAAAAKAGFEVL----TFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPG 104 (281)
T ss_pred cEEecccCC---cchhHhHHHHHHhhccCceEE----EEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCC
Confidence 344444444 445667899999999999999 88889999986321 136889999999887788
Q ss_pred CcEEEEEeChHHHHHHHHHH
Q 022749 165 EGVVLLGHSTGCQDIVHYMR 184 (292)
Q Consensus 165 ~~vvLvGHSmGG~ial~ya~ 184 (292)
.+.+.|||||||++.-.+.+
T Consensus 105 ~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 105 HPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred CceEEeeccccceeeccccc
Confidence 89999999999997655443
No 110
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.37 E-value=7.3e-07 Score=84.91 Aligned_cols=106 Identities=18% Similarity=0.232 Sum_probs=60.9
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHH-hh--CCcEEEEecccccCCCCCCCCCC-------CcHHHHHHHHHHHHHh-
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIAL-DK--ERWSLVQFLMTSSYTGYGTSSLQ-------QDAMEIDQLISYLINK- 161 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L-~~--~Gy~Vi~~~l~~D~~G~G~S~~~-------~~v~Dl~~~i~~l~~~- 161 (292)
.++++|+||||.+......+...+.++| .+ .++.||.+|. ...-..... ...+.+..+++.|.+.
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDW----s~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~ 145 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDW----SRGASNNYPQAVANTRLVGRQLAKFLSFLINNF 145 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-----HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcc----hhhccccccchhhhHHHHHHHHHHHHHHHHhhc
Confidence 5789999999997642334445666654 54 5899995554 221111111 1124455666666532
Q ss_pred -cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 162 -DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 162 -~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
...++++|||||+|++||-........ ..+|..++-+-|..
T Consensus 146 g~~~~~ihlIGhSLGAHvaG~aG~~~~~-~~ki~rItgLDPAg 187 (331)
T PF00151_consen 146 GVPPENIHLIGHSLGAHVAGFAGKYLKG-GGKIGRITGLDPAG 187 (331)
T ss_dssp ---GGGEEEEEETCHHHHHHHHHHHTTT----SSEEEEES-B-
T ss_pred CCChhHEEEEeeccchhhhhhhhhhccC-cceeeEEEecCccc
Confidence 467899999999999999887776621 23899999887764
No 111
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.36 E-value=2.1e-06 Score=77.88 Aligned_cols=100 Identities=16% Similarity=0.127 Sum_probs=69.5
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHh----cCCCcEE
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINK----DNSEGVV 168 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~----~~~~~vv 168 (292)
.+..++++|=-| ++..+|......|.. .+.++ +..+||+|.--...-..|++++++.+.++ ....++.
T Consensus 6 ~~~~L~cfP~AG---Gsa~~fr~W~~~lp~-~iel~----avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~a 77 (244)
T COG3208 6 ARLRLFCFPHAG---GSASLFRSWSRRLPA-DIELL----AVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFA 77 (244)
T ss_pred CCceEEEecCCC---CCHHHHHHHHhhCCc-hhhee----eecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCee
Confidence 455677777666 344556666677774 58899 56669999765455556676666666543 2356899
Q ss_pred EEEeChHHHHHHHHHHHhccCccccceEEEeC
Q 022749 169 LLGHSTGCQDIVHYMRANAACSRAVRAAIFQA 200 (292)
Q Consensus 169 LvGHSmGG~ial~ya~~~~~~p~~V~glIL~a 200 (292)
++||||||++|.+.|.+.......+.++.+.+
T Consensus 78 lfGHSmGa~lAfEvArrl~~~g~~p~~lfisg 109 (244)
T COG3208 78 LFGHSMGAMLAFEVARRLERAGLPPRALFISG 109 (244)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCcceEEEec
Confidence 99999999999999988633233477777764
No 112
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.35 E-value=8.4e-07 Score=86.38 Aligned_cols=111 Identities=17% Similarity=0.278 Sum_probs=82.0
Q ss_pred CCCceEEEECCCCCCCCC---hhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC--------CC----------cHHH
Q 022749 92 DYQQQVIFIGGLTDGFFA---TEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL--------QQ----------DAME 150 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s---~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~--------~~----------~v~D 150 (292)
+.+|+|++.||+...... ...-+.++-.|+++||+|. ...-||--.|.. .. ...|
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVW----LgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yD 146 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVW----LGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYD 146 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCcee----eecCcCcccchhhcccCCcCCcceeecchhhhhhcC
Confidence 678999999998742211 1111357778899999999 666687433320 11 2479
Q ss_pred HHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 151 IDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 151 l~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
|-+.|+++.+.-+.++++.+|||.|+.+....+...++-..+|+.++++||+.-..
T Consensus 147 LPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 147 LPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPK 202 (403)
T ss_pred HHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhc
Confidence 99999999887788999999999999999988887633235899999999987444
No 113
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.34 E-value=8.7e-07 Score=81.31 Aligned_cols=108 Identities=15% Similarity=0.052 Sum_probs=74.3
Q ss_pred CCceEEEECCCCCCCCChhhHHH-H------HHHHhhCCcEEEEecccccCCCCCCCCC------CCcHHHHHHHHHHHH
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEP-L------AIALDKERWSLVQFLMTSSYTGYGTSSL------QQDAMEIDQLISYLI 159 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~-l------a~~L~~~Gy~Vi~~~l~~D~~G~G~S~~------~~~v~Dl~~~i~~l~ 159 (292)
.-|+||..|+++.+......... . ...|.++||.|+ ..|.||.|.|.- ..+.+|..++|+|+.
T Consensus 19 ~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV----~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~ 94 (272)
T PF02129_consen 19 PFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVV----VQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIA 94 (272)
T ss_dssp SEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEE----EEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHH
T ss_pred cccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEE----EECCcccccCCCccccCChhHHHHHHHHHHHHH
Confidence 45789999999832211111100 0 112778999999 777799999862 235789999999997
Q ss_pred Hh-cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChhh
Q 022749 160 NK-DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREY 207 (292)
Q Consensus 160 ~~-~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~~ 207 (292)
++ ....+|-++|.|++|..++..|... |..++++|...+..|.-.
T Consensus 95 ~Qpws~G~VGm~G~SY~G~~q~~~A~~~---~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 95 AQPWSNGKVGMYGISYGGFTQWAAAARR---PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp HCTTEEEEEEEEEETHHHHHHHHHHTTT----TTEEEEEEESE-SBTCC
T ss_pred hCCCCCCeEEeeccCHHHHHHHHHHhcC---CCCceEEEecccCCcccc
Confidence 64 2235899999999999999988876 889999999888765543
No 114
>COG0400 Predicted esterase [General function prediction only]
Probab=98.33 E-value=9.7e-07 Score=78.76 Aligned_cols=107 Identities=17% Similarity=0.142 Sum_probs=66.9
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCC-------CCCCCC--Cc---HHHHHHHHHHHHH
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGY-------GTSSLQ--QD---AMEIDQLISYLIN 160 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~-------G~S~~~--~~---v~Dl~~~i~~l~~ 160 (292)
..++||++||++. +..-+-++.+.+.. ++.++.+.-.....|- +....+ +. .+.+.++++.+.+
T Consensus 17 ~~~~iilLHG~Gg---de~~~~~~~~~~~P-~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 17 AAPLLILLHGLGG---DELDLVPLPELILP-NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCcEEEEEecCCC---ChhhhhhhhhhcCC-CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 4568999999994 32223344555444 4777755333332221 111111 11 1223344444444
Q ss_pred hcCC--CcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 161 KDNS--EGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 161 ~~~~--~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
+++. ++++++|.|-|+++++..+.++ +..++++|+.+|....+
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~---~~~~~~ail~~g~~~~~ 137 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTL---PGLFAGAILFSGMLPLE 137 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhC---chhhccchhcCCcCCCC
Confidence 4454 8999999999999999999998 88999999999876544
No 115
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.32 E-value=3.1e-06 Score=80.56 Aligned_cols=112 Identities=19% Similarity=0.268 Sum_probs=77.0
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCC-----C---CCCcHHHHHHHHHHHHHhcC
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS-----S---LQQDAMEIDQLISYLINKDN 163 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S-----~---~~~~v~Dl~~~i~~l~~~~~ 163 (292)
..+.++|||||+.-++...- ..+++-....|+..+.+ .+.+|-.|.- + -.....+++.++.+|.++.+
T Consensus 114 ~~k~vlvFvHGfNntf~dav--~R~aqI~~d~g~~~~pV--vFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~ 189 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAV--YRTAQIVHDSGNDGVPV--VFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKP 189 (377)
T ss_pred CCCeEEEEEcccCCchhHHH--HHHHHHHhhcCCCcceE--EEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCC
Confidence 35679999999985443222 24556555666665544 3344543321 1 12235789999999988778
Q ss_pred CCcEEEEEeChHHHHHHHHHHHhc----c-CccccceEEEeCCCCChhh
Q 022749 164 SEGVVLLGHSTGCQDIVHYMRANA----A-CSRAVRAAIFQAPVSDREY 207 (292)
Q Consensus 164 ~~~vvLvGHSmGG~ial~ya~~~~----~-~p~~V~glIL~aP~~d~~~ 207 (292)
.++|+|++||||.+++++.+++-. . .+.+|+-+||-+|-.|.+.
T Consensus 190 ~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 190 VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhh
Confidence 999999999999999999887632 1 3457888999999766553
No 116
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.25 E-value=1.1e-05 Score=71.48 Aligned_cols=108 Identities=19% Similarity=0.189 Sum_probs=57.9
Q ss_pred CCCCceEEEECCCCCCCCChhhHHHHHH-HHhhCCcEEEEeccccc----CCCCC------CCC--CC--CcHHHH----
Q 022749 91 GDYQQQVIFIGGLTDGFFATEYLEPLAI-ALDKERWSLVQFLMTSS----YTGYG------TSS--LQ--QDAMEI---- 151 (292)
Q Consensus 91 g~~~~~VV~vHG~~~g~~s~~~~~~la~-~L~~~Gy~Vi~~~l~~D----~~G~G------~S~--~~--~~v~Dl---- 151 (292)
+.+.+.|||+||++++ ...+..+.. .+.....+++.++-... ..|.. ... .. .+.+++
T Consensus 11 ~~~~~lvi~LHG~G~~---~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~ 87 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDS---EDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESA 87 (216)
T ss_dssp ST-SEEEEEE--TTS----HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHH
T ss_pred CCCceEEEEECCCCCC---cchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHH
Confidence 3567899999999953 344444433 22233566664432110 11220 001 11 123333
Q ss_pred ---HHHHHHHHHh-cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 152 ---DQLISYLINK-DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 152 ---~~~i~~l~~~-~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
.++++...+. .+.++|+|+|.|.||.+++.++.++ |.++.|+|.+++...
T Consensus 88 ~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~---p~~~~gvv~lsG~~~ 141 (216)
T PF02230_consen 88 ERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRY---PEPLAGVVALSGYLP 141 (216)
T ss_dssp HHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCT---SSTSSEEEEES---T
T ss_pred HHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHc---CcCcCEEEEeecccc
Confidence 3344332222 3566899999999999999999998 899999999987653
No 117
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.22 E-value=5.7e-06 Score=71.63 Aligned_cols=37 Identities=35% Similarity=0.609 Sum_probs=33.0
Q ss_pred CCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 164 SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 164 ~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
.++++||+||+||..+++|+.+. ...|.|++|++|..
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~---~~~V~GalLVAppd 94 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHI---QRQVAGALLVAPPD 94 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhh---hhccceEEEecCCC
Confidence 45699999999999999999987 56999999999964
No 118
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.22 E-value=8.5e-06 Score=73.38 Aligned_cols=105 Identities=17% Similarity=0.105 Sum_probs=68.6
Q ss_pred CCceEEEECCCCCCCCChhhHHHH--HHHHh-hCCcEEEEeccccc---CCCCC--CC---CCCCcHHHHHHHHHHHHHh
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPL--AIALD-KERWSLVQFLMTSS---YTGYG--TS---SLQQDAMEIDQLISYLINK 161 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~l--a~~L~-~~Gy~Vi~~~l~~D---~~G~G--~S---~~~~~v~Dl~~~i~~l~~~ 161 (292)
..|.||++||.+.+ ...+... ...|+ ++||.|+-++-... ...+. .. .-..++..|.++++++..+
T Consensus 15 ~~PLVv~LHG~~~~---a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~ 91 (220)
T PF10503_consen 15 PVPLVVVLHGCGQS---AEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAAR 91 (220)
T ss_pred CCCEEEEeCCCCCC---HHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhh
Confidence 45889999999853 2222110 11233 56888885553211 11111 00 1123566788889888765
Q ss_pred c--CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 162 D--NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 162 ~--~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
+ +..+|++.|+|.||.++..++..| |+.+.++...+...
T Consensus 92 ~~iD~~RVyv~G~S~Gg~ma~~la~~~---pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 92 YNIDPSRVYVTGLSNGGMMANVLACAY---PDLFAAVAVVSGVP 132 (220)
T ss_pred cccCCCceeeEEECHHHHHHHHHHHhC---CccceEEEeecccc
Confidence 4 456999999999999999999999 99999988776653
No 119
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.18 E-value=9.1e-06 Score=76.71 Aligned_cols=109 Identities=17% Similarity=0.238 Sum_probs=74.1
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCC---------------CCC--CCC--C------
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGY---------------GTS--SLQ--Q------ 146 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~---------------G~S--~~~--~------ 146 (292)
+...+||+|||.+++.-.......|.+.|.+.||+++.+.+. |..+- |.. +-+ .
T Consensus 85 ~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P-~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 163 (310)
T PF12048_consen 85 KPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLP-DPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASA 163 (310)
T ss_pred CCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCC-CcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccc
Confidence 456799999999976544456778889999999999976552 21000 000 000 0
Q ss_pred ------------cHHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 147 ------------DAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 147 ------------~v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
...-|.++++++.+ .+..+++||||.+|+..++.|+.+.. +..++++|+++|-..
T Consensus 164 ~~~~~~~~~~~~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~--~~~~daLV~I~a~~p 230 (310)
T PF12048_consen 164 QEAEAREAYEERLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKP--PPMPDALVLINAYWP 230 (310)
T ss_pred cHhHHhHHHHHHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCC--CcccCeEEEEeCCCC
Confidence 01224455555544 47777999999999999999999871 346999999998643
No 120
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.17 E-value=5.6e-06 Score=79.73 Aligned_cols=102 Identities=14% Similarity=0.175 Sum_probs=61.0
Q ss_pred CCceEEEECCCCCCC-------C--------ChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC-CC-------c--
Q 022749 93 YQQQVIFIGGLTDGF-------F--------ATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL-QQ-------D-- 147 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~-------~--------s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~-~~-------~-- 147 (292)
.-|+||++||-+.+- . ....-..++..|+++||.|+ +.|.+|+|+... +. +
T Consensus 114 p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvl----a~D~~g~GER~~~e~~~~~~~~~~~ 189 (390)
T PF12715_consen 114 PFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVL----APDALGFGERGDMEGAAQGSNYDCQ 189 (390)
T ss_dssp -EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEE----EE--TTSGGG-SSCCCTTTTS--HH
T ss_pred CCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEE----EEccccccccccccccccccchhHH
Confidence 347899999965321 0 00001236788999999999 667799986431 10 0
Q ss_pred -----------------HHHHHHHHHHHHH--hcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 148 -----------------AMEIDQLISYLIN--KDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 148 -----------------v~Dl~~~i~~l~~--~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
..|...++++|.. ..+.++|.++|+||||..++.+++- .++|++.|..+-.
T Consensus 190 ~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaAL----DdRIka~v~~~~l 259 (390)
T PF12715_consen 190 ALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAAL----DDRIKATVANGYL 259 (390)
T ss_dssp HHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-----TT--EEEEES-B
T ss_pred HHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHc----chhhHhHhhhhhh
Confidence 2233346677632 3456799999999999999998887 5899998876554
No 121
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.16 E-value=1.9e-05 Score=75.40 Aligned_cols=112 Identities=12% Similarity=0.098 Sum_probs=83.5
Q ss_pred CCceEEEECCCCCCCC--ChhhHHHHHHHHh-hCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHH------hcC
Q 022749 93 YQQQVIFIGGLTDGFF--ATEYLEPLAIALD-KERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLIN------KDN 163 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~--s~~~~~~la~~L~-~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~------~~~ 163 (292)
..|.|||+||-+--+. ....+..+...++ +.+..|+ +.|||=--+...+...+|.-.++.|+.+ ..+
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvv----SVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D 164 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVV----SVDYRLAPEHPFPAAYDDGWAALKWVLKNSWLKLGAD 164 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEE----ecCcccCCCCCCCccchHHHHHHHHHHHhHHHHhCCC
Confidence 5689999999764333 2555666777774 4566677 7788877777777777887777777644 246
Q ss_pred CCcEEEEEeChHHHHHHHHHHHhcc---CccccceEEEeCCCCChhhh
Q 022749 164 SEGVVLLGHSTGCQDIVHYMRANAA---CSRAVRAAIFQAPVSDREYR 208 (292)
Q Consensus 164 ~~~vvLvGHSmGG~ial~ya~~~~~---~p~~V~glIL~aP~~d~~~~ 208 (292)
.++|+|+|-|-||.+|...+++... .+.+|+|.||+-|+......
T Consensus 165 ~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~ 212 (336)
T KOG1515|consen 165 PSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDR 212 (336)
T ss_pred cccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCC
Confidence 7899999999999999999988642 35789999999998655443
No 122
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.16 E-value=2.2e-05 Score=66.81 Aligned_cols=88 Identities=18% Similarity=0.161 Sum_probs=62.0
Q ss_pred hhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC-CCcHHHHH-HHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhc
Q 022749 110 TEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL-QQDAMEID-QLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANA 187 (292)
Q Consensus 110 ~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~-~~~v~Dl~-~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~ 187 (292)
...|..++..|.. .+.|+ ..+.+|++.+.. ...++++. .+++.+.+..+..+++++||||||.++...+.+..
T Consensus 12 ~~~~~~~~~~l~~-~~~v~----~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~ 86 (212)
T smart00824 12 PHEYARLAAALRG-RRDVS----ALPLPGFGPGEPLPASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLE 86 (212)
T ss_pred HHHHHHHHHhcCC-CccEE----EecCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHH
Confidence 3446678888885 68999 667799986543 33444433 34444554455678999999999999999888753
Q ss_pred cCccccceEEEeCCC
Q 022749 188 ACSRAVRAAIFQAPV 202 (292)
Q Consensus 188 ~~p~~V~glIL~aP~ 202 (292)
..+..+.+++++.+.
T Consensus 87 ~~~~~~~~l~~~~~~ 101 (212)
T smart00824 87 ARGIPPAAVVLLDTY 101 (212)
T ss_pred hCCCCCcEEEEEccC
Confidence 335679999988653
No 123
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.16 E-value=2.4e-05 Score=67.17 Aligned_cols=105 Identities=12% Similarity=0.112 Sum_probs=71.4
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEeccccc-CCCCCCCCCC----CcHHHHHHHHHHHHHhcCCCc
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSS-YTGYGTSSLQ----QDAMEIDQLISYLINKDNSEG 166 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D-~~G~G~S~~~----~~v~Dl~~~i~~l~~~~~~~~ 166 (292)
....+||+.||-+.. .....+..++..|+.+||.|..+++.+- .|-.|.-..+ ....+....+..|+......+
T Consensus 12 ~~~~tilLaHGAGas-mdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gp 90 (213)
T COG3571 12 PAPVTILLAHGAGAS-MDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGP 90 (213)
T ss_pred CCCEEEEEecCCCCC-CCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCc
Confidence 345578899998854 3456678899999999999996655331 1223321111 112233344445555445568
Q ss_pred EEEEEeChHHHHHHHHHHHhccCccccceEEEeC
Q 022749 167 VVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQA 200 (292)
Q Consensus 167 vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~a 200 (292)
.++-||||||-++-..+.+- ...|+++++.+
T Consensus 91 Li~GGkSmGGR~aSmvade~---~A~i~~L~clg 121 (213)
T COG3571 91 LIIGGKSMGGRVASMVADEL---QAPIDGLVCLG 121 (213)
T ss_pred eeeccccccchHHHHHHHhh---cCCcceEEEec
Confidence 99999999999999988876 55699999987
No 124
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.15 E-value=5.1e-06 Score=80.67 Aligned_cols=90 Identities=17% Similarity=0.165 Sum_probs=64.3
Q ss_pred hHHHHHHHHhhCCcEEEE-ecc-cccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhcc-
Q 022749 112 YLEPLAIALDKERWSLVQ-FLM-TSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAA- 188 (292)
Q Consensus 112 ~~~~la~~L~~~Gy~Vi~-~~l-~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~- 188 (292)
+|..+++.|.+.||..=. +-. .+|.|---. ..+.....++.+|+.+.+.. .++|+||||||||.++..|+.....
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~-~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~ 143 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA-ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQE 143 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh-hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccch
Confidence 688999999998887511 001 256552211 23345678888888876654 7899999999999999999988622
Q ss_pred --CccccceEEEeCCCC
Q 022749 189 --CSRAVRAAIFQAPVS 203 (292)
Q Consensus 189 --~p~~V~glIL~aP~~ 203 (292)
....|+++|.+|+..
T Consensus 144 ~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 144 EWKDKYIKRFISIGTPF 160 (389)
T ss_pred hhHHhhhhEEEEeCCCC
Confidence 134799999998753
No 125
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.03 E-value=2.4e-05 Score=77.38 Aligned_cols=109 Identities=12% Similarity=0.116 Sum_probs=68.6
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhh-CC-cEEEEecccccCCCCCCCCC-----CCcHHHHHHHHHHHHHh---
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDK-ER-WSLVQFLMTSSYTGYGTSSL-----QQDAMEIDQLISYLINK--- 161 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~-~G-y~Vi~~~l~~D~~G~G~S~~-----~~~v~Dl~~~i~~l~~~--- 161 (292)
...|+||+|||-+-...+.... ....|.+ .+ +.|+.++++...-|+..... ..-..|...+++|+++.
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 3468999999954211221111 1123332 23 88886665544446654321 12367999999998753
Q ss_pred c--CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 162 D--NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 162 ~--~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
. +..+|.|+|||.||..+..++... ..+..++++|++++..
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~-~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSP-DSKGLFHRAISQSGSA 213 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCc-chhHHHHHHhhhcCCc
Confidence 2 456999999999999998887763 1245688899887643
No 126
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.02 E-value=3.4e-05 Score=73.27 Aligned_cols=102 Identities=20% Similarity=0.269 Sum_probs=74.7
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC----CCcHHHHHHHHHHHHHhc--CCCc
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL----QQDAMEIDQLISYLINKD--NSEG 166 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~----~~~v~Dl~~~i~~l~~~~--~~~~ 166 (292)
.+..||+.-|.. |++.... +..-+ +.||.|+ .+++|||+.|.- .++...+++++++..+.+ ..+.
T Consensus 242 gq~LvIC~EGNA-GFYEvG~---m~tP~-~lgYsvL----GwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~ed 312 (517)
T KOG1553|consen 242 GQDLVICFEGNA-GFYEVGV---MNTPA-QLGYSVL----GWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQED 312 (517)
T ss_pred CceEEEEecCCc-cceEeee---ecChH-HhCceee----ccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccc
Confidence 356788888876 3322111 22223 4699999 889999998862 344566778888877654 4568
Q ss_pred EEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChhh
Q 022749 167 VVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREY 207 (292)
Q Consensus 167 vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~~ 207 (292)
|+|.|+|.||.-+.+.|..| | .|+++||-+...|.-.
T Consensus 313 IilygWSIGGF~~~waAs~Y---P-dVkavvLDAtFDDllp 349 (517)
T KOG1553|consen 313 IILYGWSIGGFPVAWAASNY---P-DVKAVVLDATFDDLLP 349 (517)
T ss_pred eEEEEeecCCchHHHHhhcC---C-CceEEEeecchhhhhh
Confidence 99999999999999999998 5 5999999998766543
No 127
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.01 E-value=2.7e-05 Score=71.08 Aligned_cols=105 Identities=21% Similarity=0.175 Sum_probs=68.3
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEE--EecccccCCCC----CCC------------------CCCCcHH
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLV--QFLMTSSYTGY----GTS------------------SLQQDAM 149 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi--~~~l~~D~~G~----G~S------------------~~~~~v~ 149 (292)
.-+.|||||.+ ++..-++.++..|...+ ++. .+.+..|--|- |.- +..+...
T Consensus 45 ~iPTIfIhGsg---G~asS~~~Mv~ql~~~~-~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~ 120 (288)
T COG4814 45 AIPTIFIHGSG---GTASSLNGMVNQLLPDY-KAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSK 120 (288)
T ss_pred ccceEEEecCC---CChhHHHHHHHHhhhcc-cccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHH
Confidence 35789999999 44445677888887643 210 01112232331 111 1111233
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhcc--CccccceEEEeCCC
Q 022749 150 EIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAA--CSRAVRAAIFQAPV 202 (292)
Q Consensus 150 Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~--~p~~V~glIL~aP~ 202 (292)
=++.++.+|.++++.+++.+|||||||.-..+|+..|.. .-+.+.++|.++..
T Consensus 121 wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 121 WLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred HHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 467777888888999999999999999999999999842 12468898887643
No 128
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.01 E-value=2.6e-05 Score=69.76 Aligned_cols=21 Identities=19% Similarity=0.197 Sum_probs=17.8
Q ss_pred CcEEEEEeChHHHHHHHHHHH
Q 022749 165 EGVVLLGHSTGCQDIVHYMRA 185 (292)
Q Consensus 165 ~~vvLvGHSmGG~ial~ya~~ 185 (292)
.++++|||||||.|+...+..
T Consensus 78 ~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred ccceEEEecccHHHHHHHHHH
Confidence 589999999999999866553
No 129
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.97 E-value=2.7e-05 Score=81.84 Aligned_cols=83 Identities=17% Similarity=0.100 Sum_probs=67.7
Q ss_pred HHHHHhhCCcEEEEecccccCCCCCCCCC------CCcHHHHHHHHHHHHHhc----------------CCCcEEEEEeC
Q 022749 116 LAIALDKERWSLVQFLMTSSYTGYGTSSL------QQDAMEIDQLISYLINKD----------------NSEGVVLLGHS 173 (292)
Q Consensus 116 la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~------~~~v~Dl~~~i~~l~~~~----------------~~~~vvLvGHS 173 (292)
+.++|.++||.|+ ..|.||.|.|+- ..+.+|..++|+|+..+. ...+|.++|.|
T Consensus 271 ~~~~~~~rGYaVV----~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~S 346 (767)
T PRK05371 271 LNDYFLPRGFAVV----YVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKS 346 (767)
T ss_pred HHHHHHhCCeEEE----EEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEc
Confidence 5577888999999 778899998863 334688999999997321 14699999999
Q ss_pred hHHHHHHHHHHHhccCccccceEEEeCCCCCh
Q 022749 174 TGCQDIVHYMRANAACSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 174 mGG~ial~ya~~~~~~p~~V~glIL~aP~~d~ 205 (292)
+||.+++..|... ++.++++|.+++..+.
T Consensus 347 Y~G~~~~~aAa~~---pp~LkAIVp~a~is~~ 375 (767)
T PRK05371 347 YLGTLPNAVATTG---VEGLETIIPEAAISSW 375 (767)
T ss_pred HHHHHHHHHHhhC---CCcceEEEeeCCCCcH
Confidence 9999999988887 7889999999887653
No 130
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=97.97 E-value=5.1e-05 Score=71.95 Aligned_cols=99 Identities=14% Similarity=0.153 Sum_probs=63.8
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCC-CC-----------------CCC--------
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGT-SS-----------------LQQ-------- 146 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~-S~-----------------~~~-------- 146 (292)
.-|+||.+||.+. ....+.... .++.+||.|+ ..|.||+|. +. ..+
T Consensus 82 ~~Pavv~~hGyg~---~~~~~~~~~-~~a~~G~~vl----~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr 153 (320)
T PF05448_consen 82 KLPAVVQFHGYGG---RSGDPFDLL-PWAAAGYAVL----AMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYR 153 (320)
T ss_dssp SEEEEEEE--TT-----GGGHHHHH-HHHHTT-EEE----EE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHH
T ss_pred CcCEEEEecCCCC---CCCCccccc-ccccCCeEEE----EecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHH
Confidence 4578999999984 333333333 3566899999 556688872 21 001
Q ss_pred -cHHHHHHHHHHHHHh--cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 147 -DAMEIDQLISYLINK--DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 147 -~v~Dl~~~i~~l~~~--~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
.+.|.-..++++... .+.++|.+.|.|.||.+++..|.-. ++|++++..-|..
T Consensus 154 ~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd----~rv~~~~~~vP~l 209 (320)
T PF05448_consen 154 RVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALD----PRVKAAAADVPFL 209 (320)
T ss_dssp HHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS----ST-SEEEEESESS
T ss_pred HHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhC----ccccEEEecCCCc
Confidence 135667777777642 3457999999999999999988874 6899999998854
No 131
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.95 E-value=1.1e-05 Score=71.67 Aligned_cols=108 Identities=15% Similarity=0.154 Sum_probs=70.8
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC----CCcHHHHHHHHHHHHHhc-CCCc
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL----QQDAMEIDQLISYLINKD-NSEG 166 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~----~~~v~Dl~~~i~~l~~~~-~~~~ 166 (292)
+..+.+|||||----..+...--..+.-+.++||+|..+ ||+.+.. .+.+.|+...++++.+.. +.++
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasv-------gY~l~~q~htL~qt~~~~~~gv~filk~~~n~k~ 137 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASV-------GYNLCPQVHTLEQTMTQFTHGVNFILKYTENTKV 137 (270)
T ss_pred CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEe-------ccCcCcccccHHHHHHHHHHHHHHHHHhccccee
Confidence 456899999993210011111112344455679999843 5555543 344566667777776654 4456
Q ss_pred EEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChhhh
Q 022749 167 VVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYR 208 (292)
Q Consensus 167 vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~~~ 208 (292)
+.+-|||.|+.+++....+. +.++|.|++|.+.+.+.+..
T Consensus 138 l~~gGHSaGAHLa~qav~R~--r~prI~gl~l~~GvY~l~EL 177 (270)
T KOG4627|consen 138 LTFGGHSAGAHLAAQAVMRQ--RSPRIWGLILLCGVYDLREL 177 (270)
T ss_pred EEEcccchHHHHHHHHHHHh--cCchHHHHHHHhhHhhHHHH
Confidence 77779999999999977663 26799999999998776654
No 132
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.94 E-value=3.3e-05 Score=67.96 Aligned_cols=104 Identities=21% Similarity=0.256 Sum_probs=74.8
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCC--CCCCcHHHHHHHHHHHHHhcCCCcEEEEEe
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS--SLQQDAMEIDQLISYLINKDNSEGVVLLGH 172 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S--~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGH 172 (292)
..+||+-|=+ |+ ...-+.++++|+++|+.|+-+ |-+-|=.+ +.++...|+..++++..++.+.++++|+|.
T Consensus 3 t~~v~~SGDg-Gw--~~~d~~~a~~l~~~G~~VvGv----dsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGY 75 (192)
T PF06057_consen 3 TLAVFFSGDG-GW--RDLDKQIAEALAKQGVPVVGV----DSLRYFWSERTPEQTAADLARIIRHYRARWGRKRVVLIGY 75 (192)
T ss_pred EEEEEEeCCC-Cc--hhhhHHHHHHHHHCCCeEEEe----chHHHHhhhCCHHHHHHHHHHHHHHHHHHhCCceEEEEee
Confidence 4577787755 22 233457999999999999944 43433222 334557899999999888888999999999
Q ss_pred ChHHHHHHHHHHHhc-cCccccceEEEeCCCCCh
Q 022749 173 STGCQDIVHYMRANA-ACSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 173 SmGG~ial~ya~~~~-~~p~~V~glIL~aP~~d~ 205 (292)
|.|+-|.-....+-+ ....+|+.++|++|....
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSPSTTA 109 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEeccCCcc
Confidence 999977766555541 123689999999996543
No 133
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.93 E-value=3e-05 Score=74.18 Aligned_cols=85 Identities=19% Similarity=0.219 Sum_probs=63.5
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCC--CCCC--------CC-----CcHHHHHHHHHH
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGY--GTSS--------LQ-----QDAMEIDQLISY 157 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~--G~S~--------~~-----~~v~Dl~~~i~~ 157 (292)
.-|.||+-||.+.. ..-+..+++.|++.||.|. ..+|+|- |... .. +...|+..++++
T Consensus 70 ~~PlvvlshG~Gs~---~~~f~~~A~~lAs~Gf~Va----~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~ 142 (365)
T COG4188 70 LLPLVVLSHGSGSY---VTGFAWLAEHLASYGFVVA----APDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDA 142 (365)
T ss_pred cCCeEEecCCCCCC---ccchhhhHHHHhhCceEEE----eccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHH
Confidence 45889999999954 3335678999999999999 7777873 2221 11 335688888877
Q ss_pred HHHh---------cCCCcEEEEEeChHHHHHHHHHH
Q 022749 158 LINK---------DNSEGVVLLGHSTGCQDIVHYMR 184 (292)
Q Consensus 158 l~~~---------~~~~~vvLvGHSmGG~ial~ya~ 184 (292)
|.+. .+..+|.++|||.||.-++..+.
T Consensus 143 L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 143 LLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred HHHhhcCcccccccCccceEEEecccccHHHHHhcc
Confidence 7543 45779999999999999998754
No 134
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.87 E-value=1.5e-05 Score=71.34 Aligned_cols=50 Identities=20% Similarity=0.249 Sum_probs=39.6
Q ss_pred HHHHHHHHHhcCCC--cEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 152 DQLISYLINKDNSE--GVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 152 ~~~i~~l~~~~~~~--~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
++++.++.++++.. +..|+||||||..|+.++.+| |+.+.+++.++|..+
T Consensus 100 ~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~---Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 100 EELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRH---PDLFGAVIAFSGALD 151 (251)
T ss_dssp THHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHS---TTTESEEEEESEESE
T ss_pred ccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhC---ccccccccccCcccc
Confidence 34555665554322 279999999999999999999 999999999998744
No 135
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.85 E-value=4.6e-05 Score=72.38 Aligned_cols=91 Identities=14% Similarity=0.224 Sum_probs=63.0
Q ss_pred CCCceEEEECCCCCCCCChhh----HHHHHHHHhhCCcEEEEecccccCCCCCCCCCC----CcHHHHHHHHHHHHHhc-
Q 022749 92 DYQQQVIFIGGLTDGFFATEY----LEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ----QDAMEIDQLISYLINKD- 162 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~----~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~----~~v~Dl~~~i~~l~~~~- 162 (292)
..++-||+.-|.++.+..... ...+.+...+.|-+|+ .++|||.|.|.-. +.+.|.++++++|+++.
T Consensus 135 ~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl----~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~ 210 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVL----VFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQ 210 (365)
T ss_pred CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEE----EECCCccccCCCCCCHHHHHHHHHHHHHHHHhccc
Confidence 356789999998854322100 0123333345577899 7788999988643 34667788999998642
Q ss_pred --CCCcEEEEEeChHHHHHHHHHHHh
Q 022749 163 --NSEGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 163 --~~~~vvLvGHSmGG~ial~ya~~~ 186 (292)
+.+++++.|||+||.|+...+.++
T Consensus 211 G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 211 GPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCChheEEEeeccccHHHHHHHHHhc
Confidence 347899999999999999866654
No 136
>PRK04940 hypothetical protein; Provisional
Probab=97.80 E-value=0.00011 Score=64.26 Aligned_cols=37 Identities=14% Similarity=-0.038 Sum_probs=31.6
Q ss_pred CcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChhh
Q 022749 165 EGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREY 207 (292)
Q Consensus 165 ~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~~ 207 (292)
+++.|||+|+||.-|.+++.++ . + ..||+.|...+..
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~---g--~-~aVLiNPAv~P~~ 96 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC---G--I-RQVIFNPNLFPEE 96 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH---C--C-CEEEECCCCChHH
Confidence 5799999999999999999998 2 4 6778999888754
No 137
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.77 E-value=0.00017 Score=68.90 Aligned_cols=102 Identities=22% Similarity=0.159 Sum_probs=73.7
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCC--------CC----------CcHHHHHHH
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS--------LQ----------QDAMEIDQL 154 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~--------~~----------~~v~Dl~~~ 154 (292)
.+|++|.+.|-+|+.+..+ ..-+|..|.++|+..+.++. |=||.-. +. ..+.|...+
T Consensus 91 ~rp~~IhLagTGDh~f~rR-~~l~a~pLl~~gi~s~~le~----Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~L 165 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRR-RRLMARPLLKEGIASLILEN----PYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRAL 165 (348)
T ss_pred CCceEEEecCCCccchhhh-hhhhhhHHHHcCcceEEEec----ccccccChhHhhcccccchhHHHHHHhHHHHHHHHH
Confidence 5788999999998432222 22348888888999886554 4455422 11 125677888
Q ss_pred HHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 155 ISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 155 i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
+.|+.++ +..++.|.|-||||.+|...+..+ |..|.-+-.+++.+
T Consensus 166 l~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~---p~pv~~vp~ls~~s 210 (348)
T PF09752_consen 166 LHWLERE-GYGPLGLTGISMGGHMAALAASNW---PRPVALVPCLSWSS 210 (348)
T ss_pred HHHHHhc-CCCceEEEEechhHhhHHhhhhcC---CCceeEEEeecccC
Confidence 8998776 999999999999999999988887 77777666676644
No 138
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.77 E-value=0.00015 Score=66.16 Aligned_cols=101 Identities=13% Similarity=0.105 Sum_probs=64.1
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCC-CCCCCC-------CcHHHHHHHHHHHHHhcCC
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGY-GTSSLQ-------QDAMEIDQLISYLINKDNS 164 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~-G~S~~~-------~~v~Dl~~~i~~l~~~~~~ 164 (292)
..++||+..||+ ...+.+..+|.+|+.+||+|+ ++|...| |.|+.. ...+|+..+++|+. ..+.
T Consensus 29 ~~~tiliA~Gf~---rrmdh~agLA~YL~~NGFhVi----RyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~-~~g~ 100 (294)
T PF02273_consen 29 RNNTILIAPGFA---RRMDHFAGLAEYLSANGFHVI----RYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLA-TRGI 100 (294)
T ss_dssp -S-EEEEE-TT----GGGGGGHHHHHHHHTTT--EE----EE---B-------------HHHHHHHHHHHHHHHH-HTT-
T ss_pred cCCeEEEecchh---HHHHHHHHHHHHHhhCCeEEE----eccccccccCCCCChhhcchHHhHHHHHHHHHHHH-hcCC
Confidence 458999999999 566777899999999999999 8887655 666522 22578999999998 4588
Q ss_pred CcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 165 EGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 165 ~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
.++-|+.-|+-|-||...|.+ . .+.-+|+.-.+.+..
T Consensus 101 ~~~GLIAaSLSaRIAy~Va~~----i-~lsfLitaVGVVnlr 137 (294)
T PF02273_consen 101 RRIGLIAASLSARIAYEVAAD----I-NLSFLITAVGVVNLR 137 (294)
T ss_dssp --EEEEEETTHHHHHHHHTTT----S---SEEEEES--S-HH
T ss_pred CcchhhhhhhhHHHHHHHhhc----c-CcceEEEEeeeeeHH
Confidence 999999999999999998875 3 477788776665543
No 139
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.76 E-value=0.0002 Score=69.17 Aligned_cols=111 Identities=14% Similarity=0.193 Sum_probs=70.1
Q ss_pred CCceEEEECCCCCCCCChh----hHHHHHHHHhhCCcEEEEecccccC-CCCCCCCCCCcHHHHHHHHHHHHHhcCCCcE
Q 022749 93 YQQQVIFIGGLTDGFFATE----YLEPLAIALDKERWSLVQFLMTSSY-TGYGTSSLQQDAMEIDQLISYLINKDNSEGV 167 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~----~~~~la~~L~~~Gy~Vi~~~l~~D~-~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~v 167 (292)
..|+||++||-|-.+...+ .+..+...|.+ ..++.+|...-- ..+| ...+....|+.+..++|.+..+.++|
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~--~SILvLDYsLt~~~~~~-~~yPtQL~qlv~~Y~~Lv~~~G~~nI 197 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPE--VSILVLDYSLTSSDEHG-HKYPTQLRQLVATYDYLVESEGNKNI 197 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCC--CeEEEEeccccccccCC-CcCchHHHHHHHHHHHHHhccCCCeE
Confidence 4689999999662211111 22233344443 466644332111 0122 13466678888888888866688999
Q ss_pred EEEEeChHHHHHHHHHHHhcc--CccccceEEEeCCCCChh
Q 022749 168 VLLGHSTGCQDIVHYMRANAA--CSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 168 vLvGHSmGG~ial~ya~~~~~--~p~~V~glIL~aP~~d~~ 206 (292)
+|+|-|.||.+++.+++.-.. ....-+++||++|+..+.
T Consensus 198 ~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 198 ILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 999999999999998765321 112347999999987665
No 140
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.76 E-value=0.00014 Score=71.95 Aligned_cols=107 Identities=13% Similarity=0.124 Sum_probs=65.4
Q ss_pred CceEEEECCCCCCCCCh--hhHHHHHHHHhhCCcEEEEecccccCCCCCCC---CCC-C--cHHHHHHHHHHHHHh---c
Q 022749 94 QQQVIFIGGLTDGFFAT--EYLEPLAIALDKERWSLVQFLMTSSYTGYGTS---SLQ-Q--DAMEIDQLISYLINK---D 162 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~--~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S---~~~-~--~v~Dl~~~i~~l~~~---~ 162 (292)
-|++|+|||-+-..++. ..+. -...+.+.+.-||.+++|...-||-.. ..+ . -+.|...+++|+++. .
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~-~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYD-GASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGH-THHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGG
T ss_pred cceEEEeecccccCCCccccccc-ccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhc
Confidence 48999999955322222 2222 234455668999977665443354322 111 2 357999999999763 3
Q ss_pred C--CCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 163 N--SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 163 ~--~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
| .++|.|+|||-||..+...+... .....++++|++++.
T Consensus 204 GGDp~~VTl~G~SAGa~sv~~~l~sp-~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 204 GGDPDNVTLFGQSAGAASVSLLLLSP-SSKGLFHRAILQSGS 244 (535)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHGG-GGTTSBSEEEEES--
T ss_pred ccCCcceeeeeecccccccceeeecc-ccccccccccccccc
Confidence 3 45899999999999998877762 335679999999873
No 141
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.76 E-value=7e-05 Score=77.27 Aligned_cols=104 Identities=17% Similarity=0.232 Sum_probs=56.1
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHh----------------hCCcEEEEecccccCCC-CCCCCCCCcHHHHHHHH
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALD----------------KERWSLVQFLMTSSYTG-YGTSSLQQDAMEIDQLI 155 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~----------------~~Gy~Vi~~~l~~D~~G-~G~S~~~~~v~Dl~~~i 155 (292)
.+-+|+||.|.. ++.+-.+.+|..-. ...|+.+++|+--|+-. ||+. +.+..+-+.++|
T Consensus 88 sGIPVLFIPGNA---GSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~-l~dQtEYV~dAI 163 (973)
T KOG3724|consen 88 SGIPVLFIPGNA---GSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHI-LLDQTEYVNDAI 163 (973)
T ss_pred CCceEEEecCCC---CchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHh-HHHHHHHHHHHH
Confidence 467999999988 44333333333222 12355554444323222 2332 223344455555
Q ss_pred HHHHHhc------C---CCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeC
Q 022749 156 SYLINKD------N---SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQA 200 (292)
Q Consensus 156 ~~l~~~~------~---~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~a 200 (292)
.++.+.+ . ...|+|+||||||.||...+......+..|.-+|..+
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITls 217 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLS 217 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhc
Confidence 5553321 1 2349999999999999886654222344555555443
No 142
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.75 E-value=3.5e-05 Score=77.89 Aligned_cols=89 Identities=17% Similarity=0.223 Sum_probs=63.0
Q ss_pred hHHHHHHHHhhCCcEEEEecc---cccCCCCCC-C-CCCCcHHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHh
Q 022749 112 YLEPLAIALDKERWSLVQFLM---TSSYTGYGT-S-SLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 112 ~~~~la~~L~~~Gy~Vi~~~l---~~D~~G~G~-S-~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~ 186 (292)
.|..+++.|++.||.- .+| .+|+|=-.. . ..++....++.+|+.+.+..+.+||+|+||||||+++++|+..-
T Consensus 157 vw~kLIe~L~~iGY~~--~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 157 VWAVLIANLARIGYEE--KNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred eHHHHHHHHHHcCCCC--CceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 4589999999999972 222 467762211 1 12344677899999887665678999999999999999988732
Q ss_pred cc------------CccccceEEEeCCC
Q 022749 187 AA------------CSRAVRAAIFQAPV 202 (292)
Q Consensus 187 ~~------------~p~~V~glIL~aP~ 202 (292)
.. +...|++.|.+++.
T Consensus 235 ~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 235 EAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred cccccccCCcchHHHHHHHHHheecccc
Confidence 10 23468889988774
No 143
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.70 E-value=0.00026 Score=67.97 Aligned_cols=108 Identities=12% Similarity=0.151 Sum_probs=81.0
Q ss_pred CCceEEEEeC--------CCCceEEEECCCCCCCCChhhHHHHHHHHhhC---------CcEEEEecccccCCCCCCCCC
Q 022749 82 KPVQVAFKTG--------DYQQQVIFIGGLTDGFFATEYLEPLAIALDKE---------RWSLVQFLMTSSYTGYGTSSL 144 (292)
Q Consensus 82 ~~~~~~y~~g--------~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~---------Gy~Vi~~~l~~D~~G~G~S~~ 144 (292)
.++++||..- ..-.+|+++||+. ++.+-+..++..|.+- -|.|| +...||+|-|+.
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwP---Gsv~EFykfIPlLT~p~~hg~~~d~~FEVI----~PSlPGygwSd~ 204 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWP---GSVREFYKFIPLLTDPKRHGNESDYAFEVI----APSLPGYGWSDA 204 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCC---chHHHHHhhhhhhcCccccCCccceeEEEe----ccCCCCcccCcC
Confidence 3667777541 1225799999999 4544444677877643 26788 778899999875
Q ss_pred CC----cHHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEe
Q 022749 145 QQ----DAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQ 199 (292)
Q Consensus 145 ~~----~v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~ 199 (292)
+. .+...+.++.-|.=++|..+.+|=|--+|+.|+..+|.-| |++|.|+=+.
T Consensus 205 ~sk~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLy---PenV~GlHln 260 (469)
T KOG2565|consen 205 PSKTGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLY---PENVLGLHLN 260 (469)
T ss_pred CccCCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhc---chhhhHhhhc
Confidence 43 2456666677766668999999999999999999999999 9999997654
No 144
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.66 E-value=6.7e-05 Score=74.18 Aligned_cols=108 Identities=17% Similarity=0.183 Sum_probs=71.0
Q ss_pred CCceEEEECCCCC--CCCChhhHHHHHHHHhhCC-cEEEEecccccCCCCC-CCCCC--------CcHHHHHHHHHHHHH
Q 022749 93 YQQQVIFIGGLTD--GFFATEYLEPLAIALDKER-WSLVQFLMTSSYTGYG-TSSLQ--------QDAMEIDQLISYLIN 160 (292)
Q Consensus 93 ~~~~VV~vHG~~~--g~~s~~~~~~la~~L~~~G-y~Vi~~~l~~D~~G~G-~S~~~--------~~v~Dl~~~i~~l~~ 160 (292)
..|++|+|||-+- |..+...++. ..|+++| +-|+.+|++...-||= .+... --..|+...++|+++
T Consensus 93 ~~PVmV~IHGG~y~~Gs~s~~~ydg--s~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~ 170 (491)
T COG2272 93 KLPVMVYIHGGGYIMGSGSEPLYDG--SALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRD 170 (491)
T ss_pred CCcEEEEEeccccccCCCcccccCh--HHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHH
Confidence 4599999999542 2122333332 5677778 8888777766555542 12211 136788888999875
Q ss_pred h---c--CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 161 K---D--NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 161 ~---~--~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
. . +.++|.|+|+|-|+..++.+++- +.-...++++|++++..
T Consensus 171 NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 171 NIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAA 217 (491)
T ss_pred HHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCC
Confidence 3 3 35689999999999999887664 22234577788887754
No 145
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=97.66 E-value=0.00078 Score=62.85 Aligned_cols=104 Identities=9% Similarity=0.125 Sum_probs=74.9
Q ss_pred CCceEEEECCCCCCCCC--hhhH-HHHHHHHhhCCcEEEEecccccCCCCCC--CCCCCc-----HHHHHHHHHHHHHhc
Q 022749 93 YQQQVIFIGGLTDGFFA--TEYL-EPLAIALDKERWSLVQFLMTSSYTGYGT--SSLQQD-----AMEIDQLISYLINKD 162 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s--~~~~-~~la~~L~~~Gy~Vi~~~l~~D~~G~G~--S~~~~~-----v~Dl~~~i~~l~~~~ 162 (292)
.+|+||=.|.++-+..+ ..++ .+-+..+.++ |.|+ ..|-|||-. ...+.+ .+||.+.+..+.+.+
T Consensus 45 ~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~----HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f 119 (326)
T KOG2931|consen 45 NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVY----HVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF 119 (326)
T ss_pred CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEE----ecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 57888889999832111 0111 1223344444 9999 667799843 333333 577777777777777
Q ss_pred CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 163 NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 163 ~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
+.+.|+=+|--.|+.|..+||..| |++|.||||+.+...
T Consensus 120 ~lk~vIg~GvGAGAyIL~rFAl~h---p~rV~GLvLIn~~~~ 158 (326)
T KOG2931|consen 120 GLKSVIGMGVGAGAYILARFALNH---PERVLGLVLINCDPC 158 (326)
T ss_pred CcceEEEecccccHHHHHHHHhcC---hhheeEEEEEecCCC
Confidence 999999999999999999999999 999999999988654
No 146
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.66 E-value=0.00017 Score=70.66 Aligned_cols=99 Identities=17% Similarity=0.181 Sum_probs=63.5
Q ss_pred CceEEEECCCCCCCCCh-----hhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCC--------------CcHHHHHHH
Q 022749 94 QQQVIFIGGLTDGFFAT-----EYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ--------------QDAMEIDQL 154 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~-----~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~--------------~~v~Dl~~~ 154 (292)
+|++|++.|=++ ... ..+..+|+.+ |-.|+ ...||=||.|..- +.++|+..+
T Consensus 29 gpifl~~ggE~~--~~~~~~~~~~~~~lA~~~---~a~~v----~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F 99 (434)
T PF05577_consen 29 GPIFLYIGGEGP--IEPFWINNGFMWELAKEF---GALVV----ALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYF 99 (434)
T ss_dssp SEEEEEE--SS---HHHHHHH-HHHHHHHHHH---TEEEE----EE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHH
T ss_pred CCEEEEECCCCc--cchhhhcCChHHHHHHHc---CCcEE----EeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHH
Confidence 788888988653 211 1223344433 44677 6677999998632 236889999
Q ss_pred HHHHHHhc---CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 155 ISYLINKD---NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 155 i~~l~~~~---~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
+++++.+. ...|+|++|-|+||.++.++-.+| |+.|.|.|..+++..
T Consensus 100 ~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~ky---P~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 100 IRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKY---PHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH----TTT-SEEEEET--CC
T ss_pred HHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhC---CCeeEEEEeccceee
Confidence 99987543 445899999999999999999999 999999998766543
No 147
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.61 E-value=0.00035 Score=65.04 Aligned_cols=103 Identities=8% Similarity=0.172 Sum_probs=64.8
Q ss_pred CCceEEEECCCCCCCCChhh-HHH-----HHHHHhhCCcEEEEecccccCCCCCCC--CCCCc-----HHHHHHHHHHHH
Q 022749 93 YQQQVIFIGGLTDGFFATEY-LEP-----LAIALDKERWSLVQFLMTSSYTGYGTS--SLQQD-----AMEIDQLISYLI 159 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~-~~~-----la~~L~~~Gy~Vi~~~l~~D~~G~G~S--~~~~~-----v~Dl~~~i~~l~ 159 (292)
.+|+||=.|-++ .+..- |.. -.+.+.+ .|.|+ -+|-||+..- ..+.+ .+++.+.+..+.
T Consensus 22 ~kp~ilT~HDvG---lNh~scF~~ff~~~~m~~i~~-~f~i~----Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl 93 (283)
T PF03096_consen 22 NKPAILTYHDVG---LNHKSCFQGFFNFEDMQEILQ-NFCIY----HIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVL 93 (283)
T ss_dssp TS-EEEEE--TT-----HHHHCHHHHCSHHHHHHHT-TSEEE----EEE-TTTSTT-----TT-----HHHHHCTHHHHH
T ss_pred CCceEEEecccc---ccchHHHHHHhcchhHHHHhh-ceEEE----EEeCCCCCCCcccccccccccCHHHHHHHHHHHH
Confidence 478999999998 33221 222 2233443 79999 5566998643 33333 566666666666
Q ss_pred HhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 160 NKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 160 ~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
+.++.+.++-+|--.|+.|..+||.+| |++|.|+||++|.....
T Consensus 94 ~~f~lk~vIg~GvGAGAnIL~rfAl~~---p~~V~GLiLvn~~~~~~ 137 (283)
T PF03096_consen 94 DHFGLKSVIGFGVGAGANILARFALKH---PERVLGLILVNPTCTAA 137 (283)
T ss_dssp HHHT---EEEEEETHHHHHHHHHHHHS---GGGEEEEEEES---S--
T ss_pred HhCCccEEEEEeeccchhhhhhccccC---ccceeEEEEEecCCCCc
Confidence 677999999999999999999999999 99999999999976443
No 148
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.57 E-value=0.00014 Score=71.51 Aligned_cols=99 Identities=18% Similarity=0.240 Sum_probs=67.4
Q ss_pred ECCC--CCCCCC-hhhHHHHHHHHhhCCcE----EEEecccccCCC-CCCCC-CCCcHHHHHHHHHHHHHhcCCCcEEEE
Q 022749 100 IGGL--TDGFFA-TEYLEPLAIALDKERWS----LVQFLMTSSYTG-YGTSS-LQQDAMEIDQLISYLINKDNSEGVVLL 170 (292)
Q Consensus 100 vHG~--~~g~~s-~~~~~~la~~L~~~Gy~----Vi~~~l~~D~~G-~G~S~-~~~~v~Dl~~~i~~l~~~~~~~~vvLv 170 (292)
+.|| .+.+-. ..||..+++.|..-||. ++.. .+|+|= +-.+. .++....++..++...+..+.+||+|+
T Consensus 110 vpgf~s~~~ld~~y~~w~~~i~~lv~~GYe~~~~l~ga--~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvli 187 (473)
T KOG2369|consen 110 VPGFESLDYLDPGYWYWHELIENLVGIGYERGKTLFGA--PYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLI 187 (473)
T ss_pred cCCceeeecccchhHHHHHHHHHHHhhCcccCceeecc--ccchhhccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEE
Confidence 6888 444433 34789999999988887 4433 567663 32222 334456778888877666677999999
Q ss_pred EeChHHHHHHHHHHHhcc-----CccccceEEEeC
Q 022749 171 GHSTGCQDIVHYMRANAA-----CSRAVRAAIFQA 200 (292)
Q Consensus 171 GHSmGG~ial~ya~~~~~-----~p~~V~glIL~a 200 (292)
+|||||++.++|+..+.. +...|+++|-++
T Consensus 188 sHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig 222 (473)
T KOG2369|consen 188 SHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIG 222 (473)
T ss_pred ecCCccHHHHHHHhcccccchhHHHHHHHHHHccC
Confidence 999999999999988722 123455655443
No 149
>PLN02606 palmitoyl-protein thioesterase
Probab=97.52 E-value=0.0011 Score=62.28 Aligned_cols=99 Identities=12% Similarity=0.055 Sum_probs=64.5
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhC-CcEEEEecccccCCCCCC-CCC-CCcHHHHHHHHHHHHH--hcCCCcE
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKE-RWSLVQFLMTSSYTGYGT-SSL-QQDAMEIDQLISYLIN--KDNSEGV 167 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~-Gy~Vi~~~l~~D~~G~G~-S~~-~~~v~Dl~~~i~~l~~--~~~~~~v 167 (292)
...+||+.||++|...+. -+..+.+.+.+. |+-+..+.+ |-+. .+. ...-+.++.+-+.|++ ++. +-+
T Consensus 25 ~~~PvViwHGlgD~~~~~-~~~~~~~~i~~~~~~pg~~v~i-----g~~~~~s~~~~~~~Qv~~vce~l~~~~~L~-~G~ 97 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNG-KVSNLTQFLINHSGYPGTCVEI-----GNGVQDSLFMPLRQQASIACEKIKQMKELS-EGY 97 (306)
T ss_pred CCCCEEEECCCCcccCCc-hHHHHHHHHHhCCCCCeEEEEE-----CCCcccccccCHHHHHHHHHHHHhcchhhc-Cce
Confidence 457999999999764433 456677777533 665554432 2232 222 2223455555555542 222 359
Q ss_pred EEEEeChHHHHHHHHHHHhccCcc--ccceEEEeCC
Q 022749 168 VLLGHSTGCQDIVHYMRANAACSR--AVRAAIFQAP 201 (292)
Q Consensus 168 vLvGHSmGG~ial~ya~~~~~~p~--~V~glIL~aP 201 (292)
.++|+|-||+++..++++. +. +|+-+|-++.
T Consensus 98 naIGfSQGglflRa~ierc---~~~p~V~nlISlgg 130 (306)
T PLN02606 98 NIVAESQGNLVARGLIEFC---DNAPPVINYVSLGG 130 (306)
T ss_pred EEEEEcchhHHHHHHHHHC---CCCCCcceEEEecC
Confidence 9999999999999999998 43 6999997765
No 150
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.51 E-value=0.00044 Score=63.17 Aligned_cols=103 Identities=16% Similarity=0.153 Sum_probs=64.3
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCC-CCCCCCCCC-cHHHHHHHHHHHHHhcC----CCc
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYT-GYGTSSLQQ-DAMEIDQLISYLINKDN----SEG 166 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~-G~G~S~~~~-~v~Dl~~~i~~l~~~~~----~~~ 166 (292)
...+|-||.|..-|....-.++.+.+.|.++||.|++. -|. |+..-.... ..+.++..++.+.+..+ .-+
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAt----Py~~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP 91 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIAT----PYVVTFDHQAIAREVWERFERCLRALQKRGGLDPAYLP 91 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEE----ecCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCC
Confidence 34578899996544344445678899999999999954 321 222111111 12344555555543322 247
Q ss_pred EEEEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 167 VVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 167 vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
++=+||||||-+-+.....+ +..-+|-|+++=.
T Consensus 92 ~~~vGHSlGcklhlLi~s~~---~~~r~gniliSFN 124 (250)
T PF07082_consen 92 VYGVGHSLGCKLHLLIGSLF---DVERAGNILISFN 124 (250)
T ss_pred eeeeecccchHHHHHHhhhc---cCcccceEEEecC
Confidence 88999999999998877666 4445677777653
No 151
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.49 E-value=0.0017 Score=63.55 Aligned_cols=105 Identities=9% Similarity=0.066 Sum_probs=68.5
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCC---CCCCcHHHHHHHHHHHHHhcCCCcEEEE
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS---SLQQDAMEIDQLISYLINKDNSEGVVLL 170 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S---~~~~~v~Dl~~~i~~l~~~~~~~~vvLv 170 (292)
+++||+|--+.... .-..+.+.+.|-+ |+.|| ..|+.--+.. ...-+.+|.-+.+....+..+.+ ++|+
T Consensus 102 ~~pvLiV~Pl~g~~--~~L~RS~V~~Ll~-g~dVY----l~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~ 173 (406)
T TIGR01849 102 GPAVLIVAPMSGHY--ATLLRSTVEALLP-DHDVY----ITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVI 173 (406)
T ss_pred CCcEEEEcCCchHH--HHHHHHHHHHHhC-CCcEE----EEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEE
Confidence 37999999988422 3335678889987 99999 5555544422 12222333322332222344655 9999
Q ss_pred EeChHHHHHHHHHHHhcc--CccccceEEEeCCCCChh
Q 022749 171 GHSTGCQDIVHYMRANAA--CSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 171 GHSmGG~ial~ya~~~~~--~p~~V~glIL~aP~~d~~ 206 (292)
|.++||..++.+++.... .|.+|+.++++++..|..
T Consensus 174 GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 174 AVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred EEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCC
Confidence 999999998887766532 245799999998776654
No 152
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.46 E-value=0.00032 Score=68.26 Aligned_cols=107 Identities=10% Similarity=0.139 Sum_probs=77.1
Q ss_pred CCceEEEECCCCCCCC--ChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCC----CCCcH-HHHHHHHHHHHHhcCCC
Q 022749 93 YQQQVIFIGGLTDGFF--ATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS----LQQDA-MEIDQLISYLINKDNSE 165 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~--s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~----~~~~v-~Dl~~~i~~l~~~~~~~ 165 (292)
.++++++||-+.--++ +...-+.++..|.++|..|+ .+|.++-..+. .++.+ +++...++.+++..+.+
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vf----vIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~ 181 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVF----VISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQK 181 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceE----EEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 5789999999873221 11222467888889999999 44545444332 33444 66777888888777889
Q ss_pred cEEEEEeChHHHHHHHHHHHhccCccc-cceEEEeCCCCChh
Q 022749 166 GVVLLGHSTGCQDIVHYMRANAACSRA-VRAAIFQAPVSDRE 206 (292)
Q Consensus 166 ~vvLvGHSmGG~ial~ya~~~~~~p~~-V~glIL~aP~~d~~ 206 (292)
+|.++||++||.++..++..+ +.+ |+.+++.....|-.
T Consensus 182 ~InliGyCvGGtl~~~ala~~---~~k~I~S~T~lts~~DF~ 220 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALM---AAKRIKSLTLLTSPVDFS 220 (445)
T ss_pred ccceeeEecchHHHHHHHHhh---hhcccccceeeecchhhc
Confidence 999999999999999988887 554 99999876655544
No 153
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.45 E-value=0.00032 Score=71.18 Aligned_cols=106 Identities=21% Similarity=0.197 Sum_probs=68.8
Q ss_pred CCCceEEEECCCCC------CCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC-----------CCcHHHHHHH
Q 022749 92 DYQQQVIFIGGLTD------GFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL-----------QQDAMEIDQL 154 (292)
Q Consensus 92 ~~~~~VV~vHG~~~------g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~-----------~~~v~Dl~~~ 154 (292)
.+-|+|++|-|-.+ .+....|++ ...|+..||.|+ .+|-||--.-.+ .-+++|--+-
T Consensus 640 kkYptvl~VYGGP~VQlVnnsfkgi~ylR--~~~LaslGy~Vv----~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeg 713 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQLVNNSFKGIQYLR--FCRLASLGYVVV----FIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEG 713 (867)
T ss_pred CCCceEEEEcCCCceEEeeccccceehhh--hhhhhhcceEEE----EEcCCCccccchhhHHHHhhccCeeeehhhHHH
Confidence 34456666655332 123333443 256888999999 666676432211 1123444444
Q ss_pred HHHHHHhc---CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 155 ISYLINKD---NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 155 i~~l~~~~---~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
+++|.++. +.++|.+-|+|+||.+++..+.+| |+-.+.+|.=||+.+..
T Consensus 714 lq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~---P~IfrvAIAGapVT~W~ 765 (867)
T KOG2281|consen 714 LQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQY---PNIFRVAIAGAPVTDWR 765 (867)
T ss_pred HHHHHHhcCcccchheeEeccccccHHHHHHhhcC---cceeeEEeccCcceeee
Confidence 45554443 577999999999999999999999 88888888888976543
No 154
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.45 E-value=0.0024 Score=58.94 Aligned_cols=99 Identities=19% Similarity=0.162 Sum_probs=64.0
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhh-CCcEEEEecccccCCCCC--CCCCCCcHHHHHHHHHHHHH-hcCCCcEEEE
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGYG--TSSLQQDAMEIDQLISYLIN-KDNSEGVVLL 170 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~-~Gy~Vi~~~l~~D~~G~G--~S~~~~~v~Dl~~~i~~l~~-~~~~~~vvLv 170 (292)
.++|++||+++...+.. +..+.+.|.+ -|..|+.++. |-| .+.....-+.++.+-+.++. +.-.+-+.++
T Consensus 24 ~P~ii~HGigd~c~~~~-~~~~~q~l~~~~g~~v~~lei-----g~g~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGyniv 97 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLS-MANLTQLLEELPGSPVYCLEI-----GDGIKDSSLMPLWEQVDVACEKVKQMPELSQGYNIV 97 (296)
T ss_pred CCEEEEeccCcccccch-HHHHHHHHHhCCCCeeEEEEe-----cCCcchhhhccHHHHHHHHHHHHhcchhccCceEEE
Confidence 68999999998655411 2334444443 2677886654 555 44444444555555555542 1123569999
Q ss_pred EeChHHHHHHHHHHHhccCccccceEEEeCC
Q 022749 171 GHSTGCQDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 171 GHSmGG~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
|.|.||+++..+++... ...|+-+|-++.
T Consensus 98 g~SQGglv~Raliq~cd--~ppV~n~ISL~g 126 (296)
T KOG2541|consen 98 GYSQGGLVARALIQFCD--NPPVKNFISLGG 126 (296)
T ss_pred EEccccHHHHHHHHhCC--CCCcceeEeccC
Confidence 99999999999988762 256888886643
No 155
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.42 E-value=0.0015 Score=61.14 Aligned_cols=105 Identities=16% Similarity=0.065 Sum_probs=69.8
Q ss_pred CCceEEEECCCCCCCCC---hhhHHHHHHHHhhCCcEEEEecc---cccCCCCCC----CCC---CCcHHHHHHHHHHHH
Q 022749 93 YQQQVIFIGGLTDGFFA---TEYLEPLAIALDKERWSLVQFLM---TSSYTGYGT----SSL---QQDAMEIDQLISYLI 159 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s---~~~~~~la~~L~~~Gy~Vi~~~l---~~D~~G~G~----S~~---~~~v~Dl~~~i~~l~ 159 (292)
..|.||++||-+.+... ..-|+.+|+ +.||-|+.+|- ...-.+.+. ++. .+++..|.++++.+.
T Consensus 60 ~apLvv~LHG~~~sgag~~~~sg~d~lAd---~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~ 136 (312)
T COG3509 60 GAPLVVVLHGSGGSGAGQLHGTGWDALAD---REGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLV 136 (312)
T ss_pred CCCEEEEEecCCCChHHhhcccchhhhhc---ccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHH
Confidence 34789999998743211 112444544 56999984421 000112222 221 235667888899988
Q ss_pred HhcCCC--cEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 160 NKDNSE--GVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 160 ~~~~~~--~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
.+++++ +|++.|-|-||.++..++.++ |+...++.+++...
T Consensus 137 ~~~gidp~RVyvtGlS~GG~Ma~~lac~~---p~~faa~A~VAg~~ 179 (312)
T COG3509 137 NEYGIDPARVYVTGLSNGGRMANRLACEY---PDIFAAIAPVAGLL 179 (312)
T ss_pred HhcCcCcceEEEEeeCcHHHHHHHHHhcC---cccccceeeeeccc
Confidence 887766 999999999999999999999 88888877666543
No 156
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.34 E-value=0.0019 Score=64.25 Aligned_cols=74 Identities=9% Similarity=0.069 Sum_probs=49.6
Q ss_pred cccCC-CCCCCCCC---------CcHHHHHHHHHHHHHhc---CCCcEEEEEeChHHHHHHHHHHHhcc-------Cccc
Q 022749 133 TSSYT-GYGTSSLQ---------QDAMEIDQLISYLINKD---NSEGVVLLGHSTGCQDIVHYMRANAA-------CSRA 192 (292)
Q Consensus 133 ~~D~~-G~G~S~~~---------~~v~Dl~~~i~~l~~~~---~~~~vvLvGHSmGG~ial~ya~~~~~-------~p~~ 192 (292)
-+|.| |+|.|.-. ..++|+.++++.+.++. ...+++|+||||||..+..+|.+-.. ..-.
T Consensus 126 ~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~in 205 (462)
T PTZ00472 126 YVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYIN 205 (462)
T ss_pred EEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceee
Confidence 45654 77776421 12467777776554433 44899999999999999888765310 1235
Q ss_pred cceEEEeCCCCChh
Q 022749 193 VRAAIFQAPVSDRE 206 (292)
Q Consensus 193 V~glIL~aP~~d~~ 206 (292)
++|+++-.|..++.
T Consensus 206 LkGi~IGNg~~dp~ 219 (462)
T PTZ00472 206 LAGLAVGNGLTDPY 219 (462)
T ss_pred eEEEEEeccccChh
Confidence 78999988887664
No 157
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.22 E-value=0.0012 Score=61.92 Aligned_cols=40 Identities=20% Similarity=0.132 Sum_probs=36.5
Q ss_pred CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCCh
Q 022749 163 NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 163 ~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~ 205 (292)
+..+|+++|.|+||.-++.++.++ |+.+.+.++++...++
T Consensus 267 D~sRIYviGlSrG~~gt~al~~kf---PdfFAaa~~iaG~~d~ 306 (387)
T COG4099 267 DRSRIYVIGLSRGGFGTWALAEKF---PDFFAAAVPIAGGGDR 306 (387)
T ss_pred ccceEEEEeecCcchhhHHHHHhC---chhhheeeeecCCCch
Confidence 456899999999999999999999 9999999999988774
No 158
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.22 E-value=0.003 Score=61.95 Aligned_cols=38 Identities=13% Similarity=0.040 Sum_probs=34.2
Q ss_pred CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 163 NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 163 ~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
+.++.+|+|+||||..+++.+.++ |+.+.+++.++|..
T Consensus 286 d~~~~~IaG~S~GGl~AL~~al~~---Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 286 DADRTVVAGQSFGGLAALYAGLHW---PERFGCVLSQSGSF 323 (411)
T ss_pred CccceEEEEEChHHHHHHHHHHhC---cccccEEEEeccce
Confidence 346789999999999999999999 99999999999863
No 159
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.20 E-value=0.0012 Score=55.17 Aligned_cols=55 Identities=11% Similarity=-0.077 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccC-ccccceEEEeCCCC
Q 022749 149 MEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAAC-SRAVRAAIFQAPVS 203 (292)
Q Consensus 149 ~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~-p~~V~glIL~aP~~ 203 (292)
.++...++..+.+.+..+++++||||||.+|...+...... +..+..++..+|..
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 34444454444445788999999999999999988876211 12456677666543
No 160
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.17 E-value=0.0037 Score=58.95 Aligned_cols=100 Identities=14% Similarity=0.062 Sum_probs=62.5
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhC-CcEEEEecccccCCCCCC-CC-CCCcHHHHHHHHHHHHH--hcCCCc
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKE-RWSLVQFLMTSSYTGYGT-SS-LQQDAMEIDQLISYLIN--KDNSEG 166 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~-Gy~Vi~~~l~~D~~G~G~-S~-~~~~v~Dl~~~i~~l~~--~~~~~~ 166 (292)
....+||+-||++|...+. -...+.+.+.+. |.-|+.+.+ |-+. ++ ....-+.++.+-+.|.+ ++. +-
T Consensus 23 ~~~~P~ViwHG~GD~c~~~-g~~~~~~l~~~~~g~~~~~i~i-----g~~~~~s~~~~~~~Qve~vce~l~~~~~l~-~G 95 (314)
T PLN02633 23 SVSVPFIMLHGIGTQCSDA-TNANFTQLLTNLSGSPGFCLEI-----GNGVGDSWLMPLTQQAEIACEKVKQMKELS-QG 95 (314)
T ss_pred cCCCCeEEecCCCcccCCc-hHHHHHHHHHhCCCCceEEEEE-----CCCccccceeCHHHHHHHHHHHHhhchhhh-Cc
Confidence 4567999999999875432 344565655432 555553332 2221 11 11223445555455432 222 35
Q ss_pred EEEEEeChHHHHHHHHHHHhccCcc--ccceEEEeCC
Q 022749 167 VVLLGHSTGCQDIVHYMRANAACSR--AVRAAIFQAP 201 (292)
Q Consensus 167 vvLvGHSmGG~ial~ya~~~~~~p~--~V~glIL~aP 201 (292)
++++|||-||+++..++++. +. +|+-+|-++.
T Consensus 96 ~naIGfSQGGlflRa~ierc---~~~p~V~nlISlgg 129 (314)
T PLN02633 96 YNIVGRSQGNLVARGLIEFC---DGGPPVYNYISLAG 129 (314)
T ss_pred EEEEEEccchHHHHHHHHHC---CCCCCcceEEEecC
Confidence 99999999999999999998 44 6999997765
No 161
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.10 E-value=0.0052 Score=57.43 Aligned_cols=87 Identities=24% Similarity=0.279 Sum_probs=53.4
Q ss_pred HHHHHHhhCCcEEEEecccccCCCCCCCCCCC--cHHHHHHHHHHHHH---hcC---CCcEEEEEeChHHHHHHHHHH--
Q 022749 115 PLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ--DAMEIDQLISYLIN---KDN---SEGVVLLGHSTGCQDIVHYMR-- 184 (292)
Q Consensus 115 ~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~--~v~Dl~~~i~~l~~---~~~---~~~vvLvGHSmGG~ial~ya~-- 184 (292)
.++..+-++||.|+ ..||.|.|..-... ....+-+.++..++ ..+ ..+++|+|||-||+-++..+.
T Consensus 17 ~~l~~~L~~GyaVv----~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~ 92 (290)
T PF03583_consen 17 PFLAAWLARGYAVV----APDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELA 92 (290)
T ss_pred HHHHHHHHCCCEEE----ecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHh
Confidence 34444445799999 89999999832211 12233333333322 112 358999999999998765443
Q ss_pred -HhccCcc-c--cceEEEeCCCCChhh
Q 022749 185 -ANAACSR-A--VRAAIFQAPVSDREY 207 (292)
Q Consensus 185 -~~~~~p~-~--V~glIL~aP~~d~~~ 207 (292)
+| -|+ . |.|.+..+|..+...
T Consensus 93 ~~Y--ApeL~~~l~Gaa~gg~~~dl~~ 117 (290)
T PF03583_consen 93 PSY--APELNRDLVGAAAGGPPADLAA 117 (290)
T ss_pred HHh--CcccccceeEEeccCCccCHHH
Confidence 33 233 3 788888888776554
No 162
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.08 E-value=0.0065 Score=55.74 Aligned_cols=104 Identities=14% Similarity=0.220 Sum_probs=68.0
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCC---cEEEEecccccCCCCCCCC---C------CCc----HHHHHHHH
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKER---WSLVQFLMTSSYTGYGTSS---L------QQD----AMEIDQLI 155 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~G---y~Vi~~~l~~D~~G~G~S~---~------~~~----v~Dl~~~i 155 (292)
..++.|++|.|.. +...|+.+++..|..+- ..|+ ...+.||-.-. . ..+ .++++.=+
T Consensus 27 ~~~~li~~IpGNP---G~~gFY~~F~~~L~~~l~~r~~~w----tIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKl 99 (301)
T KOG3975|consen 27 EDKPLIVWIPGNP---GLLGFYTEFARHLHLNLIDRLPVW----TISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKL 99 (301)
T ss_pred CCceEEEEecCCC---CchhHHHHHHHHHHHhccccccee----EEeccccccCCcccccccccccccccchhhHHHHHH
Confidence 4578899999987 44556678888876432 3477 55556664321 1 111 24455556
Q ss_pred HHHHHhcC-CCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 156 SYLINKDN-SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 156 ~~l~~~~~-~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
+++++..+ ..+++++|||.|+.+.+..+... ...-+|.+++++-|..
T Consensus 100 aFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~-k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 100 AFIKEYVPKDRKIYIIGHSIGAYMVLQILPSI-KLVFSVQKAVLLFPTI 147 (301)
T ss_pred HHHHHhCCCCCEEEEEecchhHHHHHHHhhhc-ccccceEEEEEecchH
Confidence 66665433 46899999999999999987743 1234788888887754
No 163
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.08 E-value=0.002 Score=67.84 Aligned_cols=105 Identities=11% Similarity=0.126 Sum_probs=71.6
Q ss_pred CCceEEEECCCCCCC----CChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC-----------CCcHHHHHHHHHH
Q 022749 93 YQQQVIFIGGLTDGF----FATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL-----------QQDAMEIDQLISY 157 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~----~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~-----------~~~v~Dl~~~i~~ 157 (292)
+-|.||.+||-.+.- ...--|.. ......|+.|+ ..|+||-|.... ..+++|...+++.
T Consensus 525 kyPllv~~yGGP~sq~v~~~~~~~~~~--~~~s~~g~~v~----~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~ 598 (755)
T KOG2100|consen 525 KYPLLVVVYGGPGSQSVTSKFSVDWNE--VVVSSRGFAVL----QVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKK 598 (755)
T ss_pred CCCEEEEecCCCCcceeeeeEEecHHH--HhhccCCeEEE----EEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHH
Confidence 347788889866311 01111222 23456799999 667787654321 2357787777777
Q ss_pred HHHh--cCCCcEEEEEeChHHHHHHHHHHHhccCccccce-EEEeCCCCChh
Q 022749 158 LINK--DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRA-AIFQAPVSDRE 206 (292)
Q Consensus 158 l~~~--~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~g-lIL~aP~~d~~ 206 (292)
+.+. .+.++|.|+|+|.||.+++..+... ++.+-+ .|.++|+.+..
T Consensus 599 ~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~---~~~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 599 VLKLPFIDRSRVAIWGWSYGGYLTLKLLESD---PGDVFKCGVAVAPVTDWL 647 (755)
T ss_pred HHhcccccHHHeEEeccChHHHHHHHHhhhC---cCceEEEEEEecceeeee
Confidence 7653 4667999999999999999999887 655555 59999987665
No 164
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.07 E-value=0.0013 Score=60.98 Aligned_cols=99 Identities=13% Similarity=0.120 Sum_probs=70.4
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC--------------------C------
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL--------------------Q------ 145 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~--------------------~------ 145 (292)
+.-|.||-.||++.+. ..|..+.. ++..||.|+ ..|-||.|.+.. +
T Consensus 81 ~~~P~vV~fhGY~g~~---g~~~~~l~-wa~~Gyavf----~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yy 152 (321)
T COG3458 81 GKLPAVVQFHGYGGRG---GEWHDMLH-WAVAGYAVF----VMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYY 152 (321)
T ss_pred CccceEEEEeeccCCC---CCcccccc-ccccceeEE----EEecccCCCccccCCCCCCCCcCCceeEeecccCCCceE
Confidence 4568899999998532 22333322 344699999 777799987621 0
Q ss_pred --CcHHHHHHHHHHHHH--hcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 146 --QDAMEIDQLISYLIN--KDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 146 --~~v~Dl~~~i~~l~~--~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
....|+-.+++.+.. ....++|.+-|.|.||.+++..+.- ..+|++++..=|.
T Consensus 153 yr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal----~~rik~~~~~~Pf 209 (321)
T COG3458 153 YRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAAL----DPRIKAVVADYPF 209 (321)
T ss_pred EeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhc----Chhhhcccccccc
Confidence 114677777777653 3456799999999999999987765 4689999888775
No 165
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.05 E-value=0.00072 Score=63.69 Aligned_cols=103 Identities=16% Similarity=0.177 Sum_probs=66.5
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCC---------C-------------CC---C
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS---------S-------------LQ---Q 146 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S---------~-------------~~---~ 146 (292)
++=|+|||-||++ .+...+..+.-.|+.+||-|.++ .||-+-.. . .. +
T Consensus 116 ~k~PvvvFSHGLg---gsRt~YSa~c~~LAShG~VVaav----EHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ek 188 (399)
T KOG3847|consen 116 DKYPVVVFSHGLG---GSRTLYSAYCTSLASHGFVVAAV----EHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEK 188 (399)
T ss_pred CCccEEEEecccc---cchhhHHHHhhhHhhCceEEEEe----ecccCcceeEEEecccccCCcccccceEeeeeccCce
Confidence 3458899999999 45555667888899999999954 44433111 0 00 0
Q ss_pred -----------cHHHHHHHHHHH-----------------------HHhcCCCcEEEEEeChHHHHHHHHHHHhccCccc
Q 022749 147 -----------DAMEIDQLISYL-----------------------INKDNSEGVVLLGHSTGCQDIVHYMRANAACSRA 192 (292)
Q Consensus 147 -----------~v~Dl~~~i~~l-----------------------~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~ 192 (292)
.++++..++.-| +..+...++.++|||.||..++.-...+ .+
T Consensus 189 ef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~----t~ 264 (399)
T KOG3847|consen 189 EFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH----TD 264 (399)
T ss_pred eEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc----cc
Confidence 123333333332 2223456789999999999998876654 57
Q ss_pred cceEEEeCCCCCh
Q 022749 193 VRAAIFQAPVSDR 205 (292)
Q Consensus 193 V~glIL~aP~~d~ 205 (292)
.+..|+...++-|
T Consensus 265 FrcaI~lD~WM~P 277 (399)
T KOG3847|consen 265 FRCAIALDAWMFP 277 (399)
T ss_pred eeeeeeeeeeecc
Confidence 8888887766543
No 166
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.03 E-value=0.0019 Score=60.09 Aligned_cols=101 Identities=15% Similarity=0.181 Sum_probs=48.2
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhh--CCcEEEEecccccCCCCCCC-C----CCCcH-HHHHHHHHHHHH--hc
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDK--ERWSLVQFLMTSSYTGYGTS-S----LQQDA-MEIDQLISYLIN--KD 162 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~--~Gy~Vi~~~l~~D~~G~G~S-~----~~~~v-~Dl~~~i~~l~~--~~ 162 (292)
...+||+.||++|...+..-+..+.+.+++ -|.-|+.+++ |-+.. + .-..+ +.++.+-+.+.+ ++
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-----g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L 78 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-----GNDPSEDVENSFFGNVNDQVEQVCEQLANDPEL 78 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-----SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGG
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-----CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhh
Confidence 457899999999864332223333333332 2655664433 22211 0 00111 223333343332 12
Q ss_pred CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCC
Q 022749 163 NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 163 ~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
. .-++++|+|-||+++..++++.+ ...|+-+|-++.
T Consensus 79 ~-~G~~~IGfSQGgl~lRa~vq~c~--~~~V~nlISlgg 114 (279)
T PF02089_consen 79 A-NGFNAIGFSQGGLFLRAYVQRCN--DPPVHNLISLGG 114 (279)
T ss_dssp T-T-EEEEEETCHHHHHHHHHHH-T--SS-EEEEEEES-
T ss_pred h-cceeeeeeccccHHHHHHHHHCC--CCCceeEEEecC
Confidence 2 46999999999999999999982 246999998765
No 167
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.97 E-value=0.0026 Score=51.78 Aligned_cols=54 Identities=24% Similarity=0.234 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCc----cccceEEEeCCCC
Q 022749 150 EIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACS----RAVRAAIFQAPVS 203 (292)
Q Consensus 150 Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p----~~V~glIL~aP~~ 203 (292)
++.+.++.+.++.+..++++.|||+||.+|..++....... ..+.-+.+-+|..
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 44455555555666678999999999999999887652211 3344444545543
No 168
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=96.97 E-value=0.0016 Score=57.75 Aligned_cols=108 Identities=17% Similarity=0.212 Sum_probs=49.5
Q ss_pred CCceEEEECCCCCCCCChhhHHH----HHHHHhhCCcEEEEecccccC-CCCCCCC----------------------C-
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEP----LAIALDKERWSLVQFLMTSSY-TGYGTSS----------------------L- 144 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~----la~~L~~~Gy~Vi~~~l~~D~-~G~G~S~----------------------~- 144 (292)
.++-||++||++ .+...++. +.+.|.+.++.++-+|-.+.. ++-|... .
T Consensus 3 ~k~riLcLHG~~---~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 79 (212)
T PF03959_consen 3 RKPRILCLHGYG---QNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD 79 (212)
T ss_dssp ---EEEEE--TT-----HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-
T ss_pred CCceEEEeCCCC---cCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC
Confidence 367899999999 55555543 445555436888766643333 2221110 0
Q ss_pred CCcHHHHHHHHHHHHH---hcCCCcEEEEEeChHHHHHHHHHHHhcc-----CccccceEEEeCCCCC
Q 022749 145 QQDAMEIDQLISYLIN---KDNSEGVVLLGHSTGCQDIVHYMRANAA-----CSRAVRAAIFQAPVSD 204 (292)
Q Consensus 145 ~~~v~Dl~~~i~~l~~---~~~~~~vvLvGHSmGG~ial~ya~~~~~-----~p~~V~glIL~aP~~d 204 (292)
.....++++.+++|.+ +.+ .=.-|+|.|.||.+|..++..... ....++-+|++++...
T Consensus 80 ~~~~~~~~~sl~~l~~~i~~~G-PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p 146 (212)
T PF03959_consen 80 DHEYEGLDESLDYLRDYIEENG-PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPP 146 (212)
T ss_dssp SGGG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----
T ss_pred cccccCHHHHHHHHHHHHHhcC-CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCC
Confidence 1123445555544432 222 125699999999999998865421 1345788999887654
No 169
>KOG3101 consensus Esterase D [General function prediction only]
Probab=96.92 E-value=0.001 Score=59.69 Aligned_cols=43 Identities=19% Similarity=0.211 Sum_probs=34.2
Q ss_pred cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChhh
Q 022749 162 DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREY 207 (292)
Q Consensus 162 ~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~~ 207 (292)
++..++-|.||||||.=|+-.+.+. +.+.+.+-..+|...|-.
T Consensus 138 ld~~k~~IfGHSMGGhGAl~~~Lkn---~~kykSvSAFAPI~NP~~ 180 (283)
T KOG3101|consen 138 LDPLKVGIFGHSMGGHGALTIYLKN---PSKYKSVSAFAPICNPIN 180 (283)
T ss_pred ccchhcceeccccCCCceEEEEEcC---cccccceeccccccCccc
Confidence 3456799999999999998877777 778888888888766543
No 170
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=96.86 E-value=0.0025 Score=64.44 Aligned_cols=80 Identities=19% Similarity=0.155 Sum_probs=65.0
Q ss_pred HHhhCCcEEEEecccccCCCCCCCCC------CCcHHHHHHHHHHHHHh-cCCCcEEEEEeChHHHHHHHHHHHhccCcc
Q 022749 119 ALDKERWSLVQFLMTSSYTGYGTSSL------QQDAMEIDQLISYLINK-DNSEGVVLLGHSTGCQDIVHYMRANAACSR 191 (292)
Q Consensus 119 ~L~~~Gy~Vi~~~l~~D~~G~G~S~~------~~~v~Dl~~~i~~l~~~-~~~~~vvLvGHSmGG~ial~ya~~~~~~p~ 191 (292)
.++.+||.|+ .-|.||.|.|.- .+.++|-.+.|+||.++ .-..+|..+|-|++|...+..|+.. |.
T Consensus 75 ~~aa~GYavV----~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~---pP 147 (563)
T COG2936 75 WFAAQGYAVV----NQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQ---PP 147 (563)
T ss_pred eeecCceEEE----EecccccccCCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcC---Cc
Confidence 5777899999 666699998862 23567888889998653 3456999999999999999999987 88
Q ss_pred ccceEEEeCCCCCh
Q 022749 192 AVRAAIFQAPVSDR 205 (292)
Q Consensus 192 ~V~glIL~aP~~d~ 205 (292)
.+++++-+.+..|.
T Consensus 148 aLkai~p~~~~~D~ 161 (563)
T COG2936 148 ALKAIAPTEGLVDR 161 (563)
T ss_pred hheeeccccccccc
Confidence 89999988887764
No 171
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.82 E-value=0.017 Score=56.28 Aligned_cols=40 Identities=10% Similarity=-0.022 Sum_probs=33.9
Q ss_pred CcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChhh
Q 022749 165 EGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREY 207 (292)
Q Consensus 165 ~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~~ 207 (292)
-|++++|+|.||.++...|.-. |-.|+++|-.+.+..+.+
T Consensus 184 lp~I~~G~s~G~yla~l~~k~a---P~~~~~~iDns~~~~p~l 223 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIA---PWLFDGVIDNSSYALPPL 223 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhC---ccceeEEEecCccccchh
Confidence 5999999999999999877776 889999998887766544
No 172
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.81 E-value=0.0029 Score=56.41 Aligned_cols=55 Identities=13% Similarity=0.069 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccC--ccccceEEEeCCCC
Q 022749 149 MEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAAC--SRAVRAAIFQAPVS 203 (292)
Q Consensus 149 ~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~--p~~V~glIL~aP~~ 203 (292)
.++...++.++++.+..++++.||||||.+|..++...... +..+..+.+-+|..
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 34445555555556778999999999999999988764211 34466666666654
No 173
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.77 E-value=0.028 Score=49.02 Aligned_cols=51 Identities=14% Similarity=0.195 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHhc-CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCC
Q 022749 148 AMEIDQLISYLINKD-NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 148 v~Dl~~~i~~l~~~~-~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
..+|..+++-|+... +..++.++|||+|+.++-..+... +..++.+|+.+.
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~---~~~vddvv~~GS 142 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQG---GLRVDDVVLVGS 142 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhC---CCCcccEEEECC
Confidence 467888888886554 667899999999999998877764 678999998864
No 174
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.65 E-value=0.0077 Score=52.39 Aligned_cols=56 Identities=14% Similarity=0.163 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHH--h-ccCccccceEEEeCCCC
Q 022749 148 AMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA--N-AACSRAVRAAIFQAPVS 203 (292)
Q Consensus 148 v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~--~-~~~p~~V~glIL~aP~~ 203 (292)
+.++..+++....+.+..+++|+|+|.|++|+..++.. . ....++|.++||.+-..
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCc
Confidence 45666666666566788899999999999999999877 1 11246899999987544
No 175
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=96.47 E-value=0.0072 Score=53.85 Aligned_cols=51 Identities=16% Similarity=0.254 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHh--cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 149 MEIDQLISYLINK--DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 149 ~Dl~~~i~~l~~~--~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
+-++.++++|+++ ...++|.|+|.|.||-+|+.+|..+ + .|+++|.++|..
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~---~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRF---P-QISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHS---S-SEEEEEEES--S
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcC---C-CccEEEEeCCce
Confidence 5678899999764 2346999999999999999999998 5 899999998854
No 176
>COG3150 Predicted esterase [General function prediction only]
Probab=96.33 E-value=0.023 Score=49.31 Aligned_cols=93 Identities=15% Similarity=0.204 Sum_probs=54.1
Q ss_pred EEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEEeChHH
Q 022749 97 VIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGC 176 (292)
Q Consensus 97 VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG 176 (292)
||++|||.....+.... .+.+++.+. .+.+. +-.-.++.+..++.+.++.+..+.+.+...|+|-|+||
T Consensus 2 ilYlHGFnSSP~shka~-l~~q~~~~~-~~~i~---------y~~p~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAV-LLLQFIDED-VRDIE---------YSTPHLPHDPQQALKELEKAVQELGDESPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHH-HHHHHHhcc-cccee---------eecCCCCCCHHHHHHHHHHHHHHcCCCCceEEeecchH
Confidence 89999998544443321 233445442 23221 11112344444444444444444466779999999999
Q ss_pred HHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 177 QDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 177 ~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
.-+.+++.++ -|+++| +.|...|.
T Consensus 71 Y~At~l~~~~-----Girav~-~NPav~P~ 94 (191)
T COG3150 71 YYATWLGFLC-----GIRAVV-FNPAVRPY 94 (191)
T ss_pred HHHHHHHHHh-----CChhhh-cCCCcCch
Confidence 9999998886 355555 55654443
No 177
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.31 E-value=0.0067 Score=59.12 Aligned_cols=98 Identities=23% Similarity=0.276 Sum_probs=66.5
Q ss_pred ceEEEECCCCCCC----CChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC-----------------CCcHHHHHH
Q 022749 95 QQVIFIGGLTDGF----FATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL-----------------QQDAMEIDQ 153 (292)
Q Consensus 95 ~~VV~vHG~~~g~----~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~-----------------~~~v~Dl~~ 153 (292)
.+|+|--|--++. ....++..+|+.|.+ -+| -..||=||+|-. ++...|...
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~A---llV----FaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ 153 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKA---LLV----FAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAE 153 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCc---eEE----EeehhccccCCCCcchhccChhhhccccHHHHHHHHHH
Confidence 6777777754221 112233456776653 455 456787887631 123578888
Q ss_pred HHHHHHHhc--CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEE-eCCC
Q 022749 154 LISYLINKD--NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIF-QAPV 202 (292)
Q Consensus 154 ~i~~l~~~~--~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL-~aP~ 202 (292)
++.+|++.. ...+|+.+|-|+||+++.++=.+| |.-|.|++. .||+
T Consensus 154 ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKY---PHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 154 LLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKY---PHIVLGALAASAPV 202 (492)
T ss_pred HHHHHhhccccccCcEEEecCchhhHHHHHHHhcC---hhhhhhhhhccCce
Confidence 888887643 356899999999999999999999 887777654 5664
No 178
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=96.25 E-value=0.014 Score=52.77 Aligned_cols=103 Identities=16% Similarity=0.169 Sum_probs=70.1
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCC---------------CCCCcHHHHHHHHHHHH
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS---------------SLQQDAMEIDQLISYLI 159 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S---------------~~~~~v~Dl~~~i~~l~ 159 (292)
.+||++--..+ ......+..|+.++.+||.|+.+|+ ++|--.+ +.+....|+..++++|+
T Consensus 40 ~~li~i~DvfG--~~~~n~r~~Adk~A~~Gy~v~vPD~---~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk 114 (242)
T KOG3043|consen 40 KVLIVIQDVFG--FQFPNTREGADKVALNGYTVLVPDF---FRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLK 114 (242)
T ss_pred eEEEEEEeeec--cccHHHHHHHHHHhcCCcEEEcchh---hcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHH
Confidence 35555544331 3344456789999999999996665 2441111 11234689999999999
Q ss_pred HhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeC-CCCChh
Q 022749 160 NKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQA-PVSDRE 206 (292)
Q Consensus 160 ~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~a-P~~d~~ 206 (292)
.+...++|-++|.-|||-+++.+..+. + .+++++..= ...+.+
T Consensus 115 ~~g~~kkIGv~GfCwGak~vv~~~~~~---~-~f~a~v~~hps~~d~~ 158 (242)
T KOG3043|consen 115 NHGDSKKIGVVGFCWGAKVVVTLSAKD---P-EFDAGVSFHPSFVDSA 158 (242)
T ss_pred HcCCcceeeEEEEeecceEEEEeeccc---h-hheeeeEecCCcCChh
Confidence 765588999999999999999998886 4 676666543 344443
No 179
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.06 E-value=0.05 Score=48.50 Aligned_cols=105 Identities=13% Similarity=0.063 Sum_probs=60.6
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEeccc-c---cCCCCCCC----------CCCCcHHHHHHHHHHH-
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMT-S---SYTGYGTS----------SLQQDAMEIDQLISYL- 158 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~-~---D~~G~G~S----------~~~~~v~Dl~~~i~~l- 158 (292)
..+|||+||++|.-.+ |.++++.|.-.+..-|-+.-. . ..-|.+.- +..++.+++....+.+
T Consensus 3 ~atIi~LHglGDsg~~---~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~ 79 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSG---WAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIA 79 (206)
T ss_pred eEEEEEEecCCCCCcc---HHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHH
Confidence 4689999999975332 445555565555555522100 0 01121111 1122333333333222
Q ss_pred --HH---h--cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCC
Q 022749 159 --IN---K--DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (292)
Q Consensus 159 --~~---~--~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d 204 (292)
.+ + .+..+|++-|.||||.++++.+..+ +..+.|++-..+...
T Consensus 80 ~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~---~~~l~G~~~~s~~~p 129 (206)
T KOG2112|consen 80 NLIDNEPANGIPSNRIGIGGFSQGGALALYSALTY---PKALGGIFALSGFLP 129 (206)
T ss_pred HHHHHHHHcCCCccceeEcccCchHHHHHHHHhcc---ccccceeeccccccc
Confidence 21 1 2456899999999999999999998 788888887666543
No 180
>COG0627 Predicted esterase [General function prediction only]
Probab=95.99 E-value=0.018 Score=54.64 Aligned_cols=38 Identities=16% Similarity=0.194 Sum_probs=34.1
Q ss_pred cEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 166 GVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 166 ~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
+..++||||||.=|+.+|.++ |++.+.+.-.+|..++.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~---pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKH---PDRFKSASSFSGILSPS 190 (316)
T ss_pred CceeEEEeccchhhhhhhhhC---cchhceecccccccccc
Confidence 789999999999999999999 89999999888876655
No 181
>PLN02454 triacylglycerol lipase
Probab=95.85 E-value=0.02 Score=56.07 Aligned_cols=55 Identities=24% Similarity=0.247 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHhcCCCc--EEEEEeChHHHHHHHHHHHhccC-----ccccceEEEeCCCC
Q 022749 149 MEIDQLISYLINKDNSEG--VVLLGHSTGCQDIVHYMRANAAC-----SRAVRAAIFQAPVS 203 (292)
Q Consensus 149 ~Dl~~~i~~l~~~~~~~~--vvLvGHSmGG~ial~ya~~~~~~-----p~~V~glIL~aP~~ 203 (292)
+++...++.++++++..+ |++.||||||.+|+..|...... ...|..+++-+|-.
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRV 271 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQV 271 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcc
Confidence 455566666666655554 99999999999999988653110 11355566666644
No 182
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.72 E-value=0.18 Score=45.55 Aligned_cols=135 Identities=10% Similarity=0.113 Sum_probs=73.5
Q ss_pred CCCceEEEECCCCCC----C---------CChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCC------CCCcHHHHH
Q 022749 92 DYQQQVIFIGGLTDG----F---------FATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS------LQQDAMEID 152 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g----~---------~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~------~~~~v~Dl~ 152 (292)
+.+..+|+|||.+-- + ......-+.++.-.+.||.|+..+- .+-+-+-... ....++...
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~-N~~~kfye~k~np~kyirt~veh~~ 177 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNP-NRERKFYEKKRNPQKYIRTPVEHAK 177 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCC-chhhhhhhcccCcchhccchHHHHH
Confidence 345689999997620 0 0000011233333356999986653 1112221111 112244444
Q ss_pred HHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeC-CCCChhhhccchhHHHHHHHHHHHHHcCCCC
Q 022749 153 QLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQA-PVSDREYRATLPETAAMIDLASSMIREGRGS 231 (292)
Q Consensus 153 ~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~a-P~~d~~~~~~~~~~~~~~~~a~~~i~~g~~~ 231 (292)
-+-..+......+.|+++.||.||...+.++.+.+ ..++|-++.|.. ++..+++-.. .-+...+-..++...++
T Consensus 178 yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~-~d~~v~aialTDs~~~~p~a~~~----e~~~~n~c~wvasntPd 252 (297)
T KOG3967|consen 178 YVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFP-DDESVFAIALTDSAMGSPQAKNK----EYLCDNACDWVASNTPD 252 (297)
T ss_pred HHHHHHhcccCcceEEEEEeccCChhHHHHHHhcC-CccceEEEEeecccccCchhcCc----cHHHHHHhhhhhcCCCC
Confidence 44444443346788999999999999999999873 236788877754 4333433221 12444555556655554
Q ss_pred C
Q 022749 232 E 232 (292)
Q Consensus 232 ~ 232 (292)
.
T Consensus 253 t 253 (297)
T KOG3967|consen 253 T 253 (297)
T ss_pred c
Confidence 3
No 183
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.61 E-value=0.038 Score=49.90 Aligned_cols=57 Identities=12% Similarity=0.087 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhc-cCccccceEEE-eCCCCChhh
Q 022749 150 EIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANA-ACSRAVRAAIF-QAPVSDREY 207 (292)
Q Consensus 150 Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~-~~p~~V~glIL-~aP~~d~~~ 207 (292)
...+.++.+.++.+ .++++.|||.||.+|.+.+.... ...++|.++.. -+|....+.
T Consensus 70 ~A~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~~~ 128 (224)
T PF11187_consen 70 SALAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSEEF 128 (224)
T ss_pred HHHHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCChhh
Confidence 33344444444444 36999999999999999887631 12357888774 577655543
No 184
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=95.47 E-value=0.022 Score=52.60 Aligned_cols=38 Identities=21% Similarity=0.237 Sum_probs=34.2
Q ss_pred CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 163 NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 163 ~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
+.++-.|+|||+||.+++..+.++ |+.+...++++|..
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~---p~~F~~y~~~SPSl 172 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTY---PDCFGRYGLISPSL 172 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcC---cchhceeeeecchh
Confidence 556799999999999999999998 89999999999953
No 185
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=95.42 E-value=0.042 Score=55.21 Aligned_cols=108 Identities=14% Similarity=0.119 Sum_probs=63.6
Q ss_pred CceEEEECCCCCCCCChhh--HHHHHHHHhhCCcEEEEecccccCCCCCCC---CCCC--cHHHHHHHHHHHHHh---c-
Q 022749 94 QQQVIFIGGLTDGFFATEY--LEPLAIALDKERWSLVQFLMTSSYTGYGTS---SLQQ--DAMEIDQLISYLINK---D- 162 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~--~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S---~~~~--~v~Dl~~~i~~l~~~---~- 162 (292)
-|++|+|||-+-...+... .......+..+..-|+.++++...-|+... ..+. -..|....++|+++. .
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 5899999996522222111 112233344445667766665555555322 2212 246888888888753 2
Q ss_pred -CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 163 -NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 163 -~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
+.++|.|+|||.||..+-.++... .......++|.++..
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp-~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSP-HSRGLFHKAISMSGN 231 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCH-hhHHHHHHHHhhccc
Confidence 467899999999999887766532 112345566665543
No 186
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.32 E-value=0.039 Score=49.30 Aligned_cols=39 Identities=18% Similarity=0.486 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHh-cCCCcEEEEEeChHHHHHHHHHHHh
Q 022749 148 AMEIDQLISYLINK-DNSEGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 148 v~Dl~~~i~~l~~~-~~~~~vvLvGHSmGG~ial~ya~~~ 186 (292)
..|+.+..++..++ .+..++||+|||-|+.++++++.++
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 46777777665544 3556999999999999999999876
No 187
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=95.15 E-value=0.22 Score=50.13 Aligned_cols=97 Identities=10% Similarity=0.104 Sum_probs=62.6
Q ss_pred CCceEEEE-----CCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHH----HHHHHHHHHhcC
Q 022749 93 YQQQVIFI-----GGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEI----DQLISYLINKDN 163 (292)
Q Consensus 93 ~~~~VV~v-----HG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl----~~~i~~l~~~~~ 163 (292)
.++++|+| ||-+=| ...--.++..+|.+ |+.||-+.+..+ |-- .+.++|+ .++++.+.+.++
T Consensus 67 ~krP~vViDPRAGHGpGIG--GFK~dSevG~AL~~-GHPvYFV~F~p~-P~p-----gQTl~DV~~ae~~Fv~~V~~~hp 137 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHGPGIG--GFKPDSEVGVALRA-GHPVYFVGFFPE-PEP-----GQTLEDVMRAEAAFVEEVAERHP 137 (581)
T ss_pred CCCCeEEeCCCCCCCCCcc--CCCcccHHHHHHHc-CCCeEEEEecCC-CCC-----CCcHHHHHHHHHHHHHHHHHhCC
Confidence 45666666 664321 11223457778875 999995544222 112 2334554 455555555554
Q ss_pred C-CcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCC
Q 022749 164 S-EGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 164 ~-~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
. .+++|+|...||+.++.+|+.+ |+.+.-+|+.+.
T Consensus 138 ~~~kp~liGnCQgGWa~~mlAA~~---Pd~~gplvlaGa 173 (581)
T PF11339_consen 138 DAPKPNLIGNCQGGWAAMMLAALR---PDLVGPLVLAGA 173 (581)
T ss_pred CCCCceEEeccHHHHHHHHHHhcC---cCccCceeecCC
Confidence 3 3999999999999999999998 898888888754
No 188
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=95.04 E-value=0.1 Score=53.65 Aligned_cols=108 Identities=12% Similarity=0.067 Sum_probs=71.3
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCC-----------CCCCcHHHHHHHHHHHHH
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS-----------SLQQDAMEIDQLISYLIN 160 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S-----------~~~~~v~Dl~~~i~~l~~ 160 (292)
+..|++|..=|--+... ...|....=-|.++||-....+- ||=|.= .+.+...|+.++.++|.+
T Consensus 446 g~~p~lLygYGaYG~s~-~p~Fs~~~lSLlDRGfiyAIAHV----RGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~ 520 (682)
T COG1770 446 GSAPLLLYGYGAYGISM-DPSFSIARLSLLDRGFVYAIAHV----RGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVK 520 (682)
T ss_pred CCCcEEEEEeccccccC-CcCcccceeeeecCceEEEEEEe----ecccccChHHHHhhhhhhccccHHHHHHHHHHHHH
Confidence 45678888777542111 12232222234467864432211 454332 134568899999999876
Q ss_pred h-c-CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChhh
Q 022749 161 K-D-NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREY 207 (292)
Q Consensus 161 ~-~-~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~~ 207 (292)
. + ..++++++|-|.||+++-..+.+. |+..+++|+.-|..|+-.
T Consensus 521 ~g~~~~~~i~a~GGSAGGmLmGav~N~~---P~lf~~iiA~VPFVDvlt 566 (682)
T COG1770 521 EGYTSPDRIVAIGGSAGGMLMGAVANMA---PDLFAGIIAQVPFVDVLT 566 (682)
T ss_pred cCcCCccceEEeccCchhHHHHHHHhhC---hhhhhheeecCCccchhh
Confidence 4 2 345899999999999999999888 999999999999877643
No 189
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=95.04 E-value=0.056 Score=52.74 Aligned_cols=82 Identities=22% Similarity=0.219 Sum_probs=59.6
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCC--CCCCcHHHHHHHHHHHHHhcCCCcEEEE
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS--SLQQDAMEIDQLISYLINKDNSEGVVLL 170 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S--~~~~~v~Dl~~~i~~l~~~~~~~~vvLv 170 (292)
....-||+.|=+ +-...-+.++++|+++|+.|+ ..|-..|=-+ +.+....|+..++++...+.+..+++|+
T Consensus 259 sd~~av~~SGDG---GWr~lDk~v~~~l~~~gvpVv----GvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~w~~~~~~li 331 (456)
T COG3946 259 SDTVAVFYSGDG---GWRDLDKEVAEALQKQGVPVV----GVDSLRYFWSERTPEQIAADLSRLIRFYARRWGAKRVLLI 331 (456)
T ss_pred cceEEEEEecCC---chhhhhHHHHHHHHHCCCcee----eeehhhhhhccCCHHHHHHHHHHHHHHHHHhhCcceEEEE
Confidence 445667887755 212234578999999999999 5554444333 2345678999999998888899999999
Q ss_pred EeChHHHHHHH
Q 022749 171 GHSTGCQDIVH 181 (292)
Q Consensus 171 GHSmGG~ial~ 181 (292)
|.|.|+=|.-.
T Consensus 332 GySfGADvlP~ 342 (456)
T COG3946 332 GYSFGADVLPF 342 (456)
T ss_pred eecccchhhHH
Confidence 99999876543
No 190
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=95.01 E-value=0.017 Score=58.92 Aligned_cols=109 Identities=15% Similarity=0.152 Sum_probs=76.3
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCC-----------CCCcHHHHHHHHHHHHH
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS-----------LQQDAMEIDQLISYLIN 160 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~-----------~~~~v~Dl~~~i~~l~~ 160 (292)
+..|.+|+.+|-.+- .-..+|..--.-|-++||.+. --+-||-|.-. ..+.++|+.+.+++|.+
T Consensus 468 g~~P~LLygYGay~i-sl~p~f~~srl~lld~G~Vla----~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve 542 (712)
T KOG2237|consen 468 GSKPLLLYGYGAYGI-SLDPSFRASRLSLLDRGWVLA----YANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVE 542 (712)
T ss_pred CCCceEEEEecccce-eeccccccceeEEEecceEEE----EEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHH
Confidence 467888888885421 112233321122334787665 33457766432 34568999999999986
Q ss_pred h--cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChhhh
Q 022749 161 K--DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYR 208 (292)
Q Consensus 161 ~--~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~~~ 208 (292)
+ ....+..+.|-|-||.++...+.++ |+.+.++|+..|+.|....
T Consensus 543 ~gyt~~~kL~i~G~SaGGlLvga~iN~r---PdLF~avia~VpfmDvL~t 589 (712)
T KOG2237|consen 543 NGYTQPSKLAIEGGSAGGLLVGACINQR---PDLFGAVIAKVPFMDVLNT 589 (712)
T ss_pred cCCCCccceeEecccCccchhHHHhccC---chHhhhhhhcCcceehhhh
Confidence 4 2346899999999999999988887 9999999999999887654
No 191
>PLN02571 triacylglycerol lipase
Probab=94.47 E-value=0.095 Score=51.49 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhcCC--CcEEEEEeChHHHHHHHHHHHh
Q 022749 150 EIDQLISYLINKDNS--EGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 150 Dl~~~i~~l~~~~~~--~~vvLvGHSmGG~ial~ya~~~ 186 (292)
++...+..+.++++. .+|++.||||||.+|...|...
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 344444444444333 2689999999999999988753
No 192
>PLN02162 triacylglycerol lipase
Probab=94.46 E-value=0.065 Score=53.28 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHH
Q 022749 149 MEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMR 184 (292)
Q Consensus 149 ~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~ 184 (292)
+++.+.++.+.++.+..++++.|||+||.+|..++.
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 455555655555567779999999999999999765
No 193
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.39 E-value=0.34 Score=48.47 Aligned_cols=100 Identities=15% Similarity=0.071 Sum_probs=70.4
Q ss_pred CCCceEEEECCCCC-C--C--CChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCC--------------CcHHHHH
Q 022749 92 DYQQQVIFIGGLTD-G--F--FATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ--------------QDAMEID 152 (292)
Q Consensus 92 ~~~~~VV~vHG~~~-g--~--~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~--------------~~v~Dl~ 152 (292)
+.+|..|+|.|=+. + + .....|..+|+ +-|-.|+ ...||=||.|... +..+|++
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Ak---kfgA~v~----~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla 156 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAK---KFGATVF----QLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLA 156 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHH---HhCCeeE----EeeeeccccCCCCCCCcccchhhhhHHHHHHHHH
Confidence 45789999999653 1 1 11223444555 4466888 5566889977422 2357888
Q ss_pred HHHHHHHHhcC---CCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCC
Q 022749 153 QLISYLINKDN---SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 153 ~~i~~l~~~~~---~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
.+|+.+..+.+ ..|.|.+|-|+-|.++.++=++| |+.|-|.|..+.
T Consensus 157 ~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~y---Pel~~GsvASSa 205 (514)
T KOG2182|consen 157 EFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKY---PELTVGSVASSA 205 (514)
T ss_pred HHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhC---chhheeeccccc
Confidence 88888765432 24899999999999999999999 999988887543
No 194
>PLN00413 triacylglycerol lipase
Probab=94.28 E-value=0.074 Score=52.98 Aligned_cols=36 Identities=17% Similarity=0.302 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHH
Q 022749 150 EIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (292)
Q Consensus 150 Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~ 185 (292)
++...++.+.++++..++++.|||+||.+|...+..
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHH
Confidence 455555555566677899999999999999998753
No 195
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=93.85 E-value=0.13 Score=49.55 Aligned_cols=42 Identities=21% Similarity=0.241 Sum_probs=31.5
Q ss_pred cCCCcEEEEEeChHHHHHHHHHHHhcc--CccccceEEEeCCCC
Q 022749 162 DNSEGVVLLGHSTGCQDIVHYMRANAA--CSRAVRAAIFQAPVS 203 (292)
Q Consensus 162 ~~~~~vvLvGHSmGG~ial~ya~~~~~--~p~~V~glIL~aP~~ 203 (292)
.+..||.|||||+|+-++.+.+.+-.+ .-..|+-++|++...
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 477789999999999999887766422 123478899987544
No 196
>PLN02934 triacylglycerol lipase
Probab=93.81 E-value=0.092 Score=52.71 Aligned_cols=36 Identities=17% Similarity=0.303 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHH
Q 022749 150 EIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (292)
Q Consensus 150 Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~ 185 (292)
.+...++.++++++..++++.|||+||.+|...+..
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHH
Confidence 455666666667777899999999999999998753
No 197
>PLN02408 phospholipase A1
Probab=93.64 E-value=0.12 Score=50.07 Aligned_cols=37 Identities=19% Similarity=0.202 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhcCCC--cEEEEEeChHHHHHHHHHHHh
Q 022749 150 EIDQLISYLINKDNSE--GVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 150 Dl~~~i~~l~~~~~~~--~vvLvGHSmGG~ial~ya~~~ 186 (292)
++.+.++.+.++++.. +|++.|||+||.+|...|...
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 3444444444544433 599999999999999988764
No 198
>PLN02310 triacylglycerol lipase
Probab=93.53 E-value=0.093 Score=51.42 Aligned_cols=22 Identities=18% Similarity=0.155 Sum_probs=19.0
Q ss_pred CCcEEEEEeChHHHHHHHHHHH
Q 022749 164 SEGVVLLGHSTGCQDIVHYMRA 185 (292)
Q Consensus 164 ~~~vvLvGHSmGG~ial~ya~~ 185 (292)
..+|++.|||+||.+|+..|..
T Consensus 208 ~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 208 EVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred cceEEEEcccHHHHHHHHHHHH
Confidence 3579999999999999998754
No 199
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=93.40 E-value=0.15 Score=45.73 Aligned_cols=79 Identities=14% Similarity=0.203 Sum_probs=50.4
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHh-hCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEE
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALD-KERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLL 170 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~-~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLv 170 (292)
+.+..|||..|++ .+.. ..+.|. ..+|.|+. .+|||-.-. |. + + .++++|.||
T Consensus 9 ~~~~LilfF~GWg---~d~~----~f~hL~~~~~~D~l~---~yDYr~l~~--------d~----~-~---~~y~~i~lv 62 (213)
T PF04301_consen 9 NGKELILFFAGWG---MDPS----PFSHLILPENYDVLI---CYDYRDLDF--------DF----D-L---SGYREIYLV 62 (213)
T ss_pred CCCeEEEEEecCC---CChH----HhhhccCCCCccEEE---EecCccccc--------cc----c-c---ccCceEEEE
Confidence 3457999999999 4432 334442 23677762 678875422 11 1 2 157899999
Q ss_pred EeChHHHHHHHHHHHhccCccccceEEEeCC
Q 022749 171 GHSTGCQDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 171 GHSmGG~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
++|||-.+|..++... +++..|.++.
T Consensus 63 AWSmGVw~A~~~l~~~-----~~~~aiAING 88 (213)
T PF04301_consen 63 AWSMGVWAANRVLQGI-----PFKRAIAING 88 (213)
T ss_pred EEeHHHHHHHHHhccC-----CcceeEEEEC
Confidence 9999999998876643 3555555443
No 200
>PLN03037 lipase class 3 family protein; Provisional
Probab=92.59 E-value=0.14 Score=51.46 Aligned_cols=21 Identities=19% Similarity=0.175 Sum_probs=18.6
Q ss_pred CcEEEEEeChHHHHHHHHHHH
Q 022749 165 EGVVLLGHSTGCQDIVHYMRA 185 (292)
Q Consensus 165 ~~vvLvGHSmGG~ial~ya~~ 185 (292)
.++++.|||+||.+|+..|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 479999999999999998865
No 201
>PLN02324 triacylglycerol lipase
Probab=92.58 E-value=0.2 Score=49.16 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhcCC--CcEEEEEeChHHHHHHHHHHH
Q 022749 150 EIDQLISYLINKDNS--EGVVLLGHSTGCQDIVHYMRA 185 (292)
Q Consensus 150 Dl~~~i~~l~~~~~~--~~vvLvGHSmGG~ial~ya~~ 185 (292)
++.+-|..++++++. .+|++.|||+||.+|+..|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 344444555555443 369999999999999998764
No 202
>PLN02847 triacylglycerol lipase
Probab=92.37 E-value=0.21 Score=51.04 Aligned_cols=33 Identities=12% Similarity=0.113 Sum_probs=24.6
Q ss_pred HHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHH
Q 022749 153 QLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (292)
Q Consensus 153 ~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~ 185 (292)
..+..+.++++.-+++++|||+||.+|..++..
T Consensus 239 ~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 239 PCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 333344445666799999999999999987664
No 203
>PLN02802 triacylglycerol lipase
Probab=92.01 E-value=0.25 Score=49.64 Aligned_cols=37 Identities=16% Similarity=0.167 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhcCC--CcEEEEEeChHHHHHHHHHHHh
Q 022749 150 EIDQLISYLINKDNS--EGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 150 Dl~~~i~~l~~~~~~--~~vvLvGHSmGG~ial~ya~~~ 186 (292)
++.+-+..+.++++. .+|++.|||+||.+|...|...
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 333334444444432 3699999999999999987654
No 204
>PLN02719 triacylglycerol lipase
Probab=91.60 E-value=0.29 Score=49.24 Aligned_cols=37 Identities=16% Similarity=0.158 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHhcCC-----CcEEEEEeChHHHHHHHHHHH
Q 022749 149 MEIDQLISYLINKDNS-----EGVVLLGHSTGCQDIVHYMRA 185 (292)
Q Consensus 149 ~Dl~~~i~~l~~~~~~-----~~vvLvGHSmGG~ial~ya~~ 185 (292)
+++.+.+..++++++. .+|++.|||+||.+|...|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 3444444555544432 479999999999999998764
No 205
>PLN02753 triacylglycerol lipase
Probab=91.51 E-value=0.3 Score=49.29 Aligned_cols=37 Identities=16% Similarity=0.179 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhcC-----CCcEEEEEeChHHHHHHHHHHH
Q 022749 149 MEIDQLISYLINKDN-----SEGVVLLGHSTGCQDIVHYMRA 185 (292)
Q Consensus 149 ~Dl~~~i~~l~~~~~-----~~~vvLvGHSmGG~ial~ya~~ 185 (292)
+++.+.|+.+.++++ ..+|++.|||+||.+|...|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 344444445544443 3589999999999999998764
No 206
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=91.34 E-value=0.28 Score=50.09 Aligned_cols=105 Identities=14% Similarity=0.070 Sum_probs=72.2
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCC-----------CCCcHHHHHHHHHHHHHh
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS-----------LQQDAMEIDQLISYLINK 161 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~-----------~~~~v~Dl~~~i~~l~~~ 161 (292)
.+|++|+--|-.+-.....|...+ ..+-++|...+..|+ ||=|.-. .++..+|+.+++++|+++
T Consensus 420 ~~pTll~aYGGF~vsltP~fs~~~-~~WLerGg~~v~ANI----RGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~r 494 (648)
T COG1505 420 ENPTLLYAYGGFNISLTPRFSGSR-KLWLERGGVFVLANI----RGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKR 494 (648)
T ss_pred CCceEEEeccccccccCCccchhh-HHHHhcCCeEEEEec----ccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHh
Confidence 356666554422211223343334 544456877774444 8877643 345689999999999764
Q ss_pred cCC---CcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 162 DNS---EGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 162 ~~~---~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
++ +++-+.|-|=||.++-..+.++ |+.+.++|..-|+.|.-
T Consensus 495 -gitspe~lgi~GgSNGGLLvg~alTQr---PelfgA~v~evPllDMl 538 (648)
T COG1505 495 -GITSPEKLGIQGGSNGGLLVGAALTQR---PELFGAAVCEVPLLDML 538 (648)
T ss_pred -CCCCHHHhhhccCCCCceEEEeeeccC---hhhhCceeeccchhhhh
Confidence 33 5789999999999988888888 99999999998987643
No 207
>PLN02761 lipase class 3 family protein
Probab=91.09 E-value=0.35 Score=48.78 Aligned_cols=21 Identities=19% Similarity=0.199 Sum_probs=18.4
Q ss_pred CcEEEEEeChHHHHHHHHHHH
Q 022749 165 EGVVLLGHSTGCQDIVHYMRA 185 (292)
Q Consensus 165 ~~vvLvGHSmGG~ial~ya~~ 185 (292)
.+|++.|||+||.+|...|..
T Consensus 294 ~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 479999999999999988754
No 208
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=90.79 E-value=1.6 Score=39.49 Aligned_cols=41 Identities=20% Similarity=0.130 Sum_probs=28.5
Q ss_pred CCCcEEEEEeChHHHHHHHHHHHhccCcc---ccceEEEeCCCC
Q 022749 163 NSEGVVLLGHSTGCQDIVHYMRANAACSR---AVRAAIFQAPVS 203 (292)
Q Consensus 163 ~~~~vvLvGHSmGG~ial~ya~~~~~~p~---~V~glIL~aP~~ 203 (292)
..++++++|+|.|+.++...+.+....+. ..-.+||++-..
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNPR 89 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCCC
Confidence 56789999999999999998887633111 233466665443
No 209
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=90.50 E-value=0.71 Score=43.46 Aligned_cols=40 Identities=18% Similarity=0.029 Sum_probs=35.3
Q ss_pred CCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 164 SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 164 ~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
...-+|.|-|+||.+++..+..| |+.+..++..+|..+..
T Consensus 176 a~~r~L~G~SlGG~vsL~agl~~---Pe~FG~V~s~Sps~~~~ 215 (299)
T COG2382 176 ADGRVLAGDSLGGLVSLYAGLRH---PERFGHVLSQSGSFWWT 215 (299)
T ss_pred CCCcEEeccccccHHHHHHHhcC---chhhceeeccCCccccC
Confidence 34578999999999999999999 99999999999987654
No 210
>PLN02209 serine carboxypeptidase
Probab=89.93 E-value=3.3 Score=41.06 Aligned_cols=45 Identities=11% Similarity=0.162 Sum_probs=31.7
Q ss_pred CCCcEEEEEeChHHHHHHHHHHHhc-------cCccccceEEEeCCCCChhh
Q 022749 163 NSEGVVLLGHSTGCQDIVHYMRANA-------ACSRAVRAAIFQAPVSDREY 207 (292)
Q Consensus 163 ~~~~vvLvGHSmGG~ial~ya~~~~-------~~p~~V~glIL~aP~~d~~~ 207 (292)
...+++|.|.|+||.-+-.+|..-. ..+-.++|+++..|..++..
T Consensus 165 ~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~ 216 (437)
T PLN02209 165 LSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEF 216 (437)
T ss_pred cCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhh
Confidence 3458999999999986666654321 01235789999999887754
No 211
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=89.74 E-value=0.54 Score=44.96 Aligned_cols=37 Identities=19% Similarity=0.098 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHH
Q 022749 149 MEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (292)
Q Consensus 149 ~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~ 185 (292)
..+++.++.|++.++.-+|++-|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5677777777777777899999999999999988765
No 212
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=89.47 E-value=0.7 Score=47.42 Aligned_cols=103 Identities=14% Similarity=0.050 Sum_probs=56.5
Q ss_pred CCceEEEECCCC-CCCCChhhHHHHHHHHhhCCcEEEEecccccCCC-CCCCCCCCcHHHHHHHHHHH----HHhcCCCc
Q 022749 93 YQQQVIFIGGLT-DGFFATEYLEPLAIALDKERWSLVQFLMTSSYTG-YGTSSLQQDAMEIDQLISYL----INKDNSEG 166 (292)
Q Consensus 93 ~~~~VV~vHG~~-~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G-~G~S~~~~~v~Dl~~~i~~l----~~~~~~~~ 166 (292)
..+.++++||.. -.-.+.++|. .-..|...|-.|=.. .+|++. .|.-......+-+..+..+. ..++...+
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~-wqs~lsl~gevvev~--tfdl~n~igG~nI~h~ae~~vSf~r~kvlei~gefpha~ 251 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWS-WQSRLSLKGEVVEVP--TFDLNNPIGGANIKHAAEYSVSFDRYKVLEITGEFPHAP 251 (784)
T ss_pred CCceEEeccCCCCCCccchHHHh-HHHHHhhhceeeeec--cccccCCCCCcchHHHHHHHHHHhhhhhhhhhccCCCCc
Confidence 467889999987 2223344443 335555555333211 344431 22212222222233333322 23567889
Q ss_pred EEEEEeChHHHHHHHHHHHhccCccccceEEEeC
Q 022749 167 VVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQA 200 (292)
Q Consensus 167 vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~a 200 (292)
|+|+|.|||..++.+..... ....|+++|.++
T Consensus 252 IiLvGrsmGAlVachVSpsn--sdv~V~~vVCig 283 (784)
T KOG3253|consen 252 IILVGRSMGALVACHVSPSN--SDVEVDAVVCIG 283 (784)
T ss_pred eEEEecccCceeeEEecccc--CCceEEEEEEec
Confidence 99999999988887765543 134489999876
No 213
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=89.23 E-value=1.1 Score=44.83 Aligned_cols=40 Identities=15% Similarity=0.111 Sum_probs=36.0
Q ss_pred CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCCh
Q 022749 163 NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 163 ~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~ 205 (292)
..+.-+..|-|.||-.++..|++| |+..+|+|.-+|....
T Consensus 113 ~p~~sY~~GcS~GGRqgl~~AQry---P~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 113 APKYSYFSGCSTGGRQGLMAAQRY---PEDFDGILAGAPAINW 152 (474)
T ss_pred CCCceEEEEeCCCcchHHHHHHhC---hhhcCeEEeCCchHHH
Confidence 456789999999999999999999 9999999999997543
No 214
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=88.95 E-value=2.8 Score=41.57 Aligned_cols=44 Identities=11% Similarity=0.119 Sum_probs=31.5
Q ss_pred CCCcEEEEEeChHHHHHHHHHHHhcc-------CccccceEEEeCCCCChh
Q 022749 163 NSEGVVLLGHSTGCQDIVHYMRANAA-------CSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 163 ~~~~vvLvGHSmGG~ial~ya~~~~~-------~p~~V~glIL~aP~~d~~ 206 (292)
...+++|.|.|+||.-+-.+|.+-.. .+-.++|+++-.|..++.
T Consensus 163 ~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~ 213 (433)
T PLN03016 163 FSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMD 213 (433)
T ss_pred cCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCch
Confidence 35689999999999877766654210 123678999988877665
No 215
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=86.53 E-value=1.3 Score=41.85 Aligned_cols=46 Identities=15% Similarity=0.096 Sum_probs=32.9
Q ss_pred HHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 152 DQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 152 ~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
.++...+++.++..++.|-|||+||.+|..+-.++ .+-.+.+.+|.
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f-----glP~VaFesPG 308 (425)
T KOG4540|consen 263 LDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF-----GLPVVAFESPG 308 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHHHhcccc-----CCceEEecCch
Confidence 34444455667888999999999999999887765 24455555553
No 216
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=86.53 E-value=1.3 Score=41.85 Aligned_cols=46 Identities=15% Similarity=0.096 Sum_probs=32.9
Q ss_pred HHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 152 DQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 152 ~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
.++...+++.++..++.|-|||+||.+|..+-.++ .+-.+.+.+|.
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f-----glP~VaFesPG 308 (425)
T COG5153 263 LDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF-----GLPVVAFESPG 308 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHHHhcccc-----CCceEEecCch
Confidence 34444455667888999999999999999887765 24455555553
No 217
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=86.25 E-value=1.4 Score=38.24 Aligned_cols=68 Identities=15% Similarity=0.074 Sum_probs=44.0
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhc
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKD 162 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~ 162 (292)
..++|+++||-.|.......-..+++.|.+.|..+..+ .+..-|||........+-.+.+++|+.+.+
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~--~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELL--IFPGEGHGFGNPENRRDWYERILDFFDKYL 210 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEE--EETT-SSSTTSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEE--EcCcCCCCCCCchhHHHHHHHHHHHHHHHc
Confidence 46899999998875544444456888999888776533 334456765544334455667777776544
No 218
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=85.06 E-value=3 Score=43.11 Aligned_cols=69 Identities=16% Similarity=0.199 Sum_probs=49.2
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhc
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKD 162 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~ 162 (292)
+-+.++++|||..|.......-..+.++|.++|..|-.+ .+---||+.+.....+.-+..+++|+.+++
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~--~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELV--VFPDEGHGFSRPENRVKVLKEILDWFKRHL 617 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEE--EeCCCCcCCCCchhHHHHHHHHHHHHHHHh
Confidence 346899999999986544444456888999889888643 333357888776666777888888886543
No 219
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=83.82 E-value=1.2 Score=43.66 Aligned_cols=81 Identities=17% Similarity=0.154 Sum_probs=43.9
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCC-C--CCCC-c---HHHHHHHHHHHHHhcCCC
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGT-S--SLQQ-D---AMEIDQLISYLINKDNSE 165 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~-S--~~~~-~---v~Dl~~~i~~l~~~~~~~ 165 (292)
.+-.||++||+.. .+..||...+....+. +.=. ...++|+=. . +... + ....+.+++.+.+ ..+.
T Consensus 79 ~~HLvVlthGi~~--~~~~~~~~~~~~~~kk-~p~~----~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~-~si~ 150 (405)
T KOG4372|consen 79 PKHLVVLTHGLHG--ADMEYWKEKIEQMTKK-MPDK----LIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYD-YSIE 150 (405)
T ss_pred CceEEEecccccc--ccHHHHHHHHHhhhcC-CCcc----eEeeeccccchhhccccceeeecccHHHHhhhhhc-cccc
Confidence 3457999999985 4677777666665542 2211 112233311 1 1110 0 1122223333322 2468
Q ss_pred cEEEEEeChHHHHHHH
Q 022749 166 GVVLLGHSTGCQDIVH 181 (292)
Q Consensus 166 ~vvLvGHSmGG~ial~ 181 (292)
++-.+|||+||.++.+
T Consensus 151 kISfvghSLGGLvar~ 166 (405)
T KOG4372|consen 151 KISFVGHSLGGLVARY 166 (405)
T ss_pred eeeeeeeecCCeeeeE
Confidence 9999999999997765
No 220
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=81.92 E-value=2.2 Score=42.13 Aligned_cols=100 Identities=17% Similarity=0.142 Sum_probs=72.6
Q ss_pred CCCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCC----------CcHHHHHHHHHHHHH
Q 022749 91 GDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ----------QDAMEIDQLISYLIN 160 (292)
Q Consensus 91 g~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~----------~~v~Dl~~~i~~l~~ 160 (292)
+-.+|+|++.-|++-.. .....++...|.. +-+ ...||=||.|..+ +.+.|.+.+++.++.
T Consensus 60 ~~drPtV~~T~GY~~~~--~p~r~Ept~Lld~---NQl----~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~ 130 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVST--SPRRSEPTQLLDG---NQL----SVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKP 130 (448)
T ss_pred CCCCCeEEEecCccccc--CccccchhHhhcc---ceE----EEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHh
Confidence 34679999999987321 2223356666653 223 4566888888632 346899999999977
Q ss_pred hcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEE-eCCCC
Q 022749 161 KDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIF-QAPVS 203 (292)
Q Consensus 161 ~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL-~aP~~ 203 (292)
-++ .+.+--|-|=||+.++.|=.-| |+.|++.|- +||..
T Consensus 131 iY~-~kWISTG~SKGGmTa~y~rrFy---P~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 131 IYP-GKWISTGGSKGGMTAVYYRRFY---PDDVDGTVAYVAPND 170 (448)
T ss_pred hcc-CCceecCcCCCceeEEEEeeeC---CCCCCeeeeeecccc
Confidence 554 6899999999999999998888 999999886 67853
No 221
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=81.73 E-value=5.2 Score=38.22 Aligned_cols=129 Identities=10% Similarity=0.089 Sum_probs=66.7
Q ss_pred cceEEEEeCCCCceEEEE---eC---CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEec--------------
Q 022749 72 FRGVLFKYGPKPVQVAFK---TG---DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFL-------------- 131 (292)
Q Consensus 72 ~~g~l~~y~~~~~~~~y~---~g---~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~-------------- 131 (292)
..|.+-.-.+...+++|- .. ..+|.||++.|-.+ ....+ -.|.+.|=..+..+
T Consensus 12 ~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG---~SS~~----g~f~e~GP~~~~~~~~~~l~~n~~sW~~ 84 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPG---CSSMW----GLFGENGPFRINPDGPYTLEDNPYSWNK 84 (415)
T ss_dssp EEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTT---B-THH----HHHCTTSSEEEETTSTSEEEE-TT-GGG
T ss_pred EEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCce---ecccc----ccccccCceEEeeccccccccccccccc
Confidence 446664443444454442 22 35789999999652 22222 23344442222100
Q ss_pred ----ccccCC-CCCCCCC--C-----Cc---HHHHHHHHHHHHH---hcCCCcEEEEEeChHHHHHHHHHHH---hcc--
Q 022749 132 ----MTSSYT-GYGTSSL--Q-----QD---AMEIDQLISYLIN---KDNSEGVVLLGHSTGCQDIVHYMRA---NAA-- 188 (292)
Q Consensus 132 ----l~~D~~-G~G~S~~--~-----~~---v~Dl~~~i~~l~~---~~~~~~vvLvGHSmGG~ial~ya~~---~~~-- 188 (292)
+-+|.| |-|.|.. . .+ ++|+..+++.+.. ++...+++|.|-|+||.-+-.+|.+ ...
T Consensus 85 ~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~ 164 (415)
T PF00450_consen 85 FANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKG 164 (415)
T ss_dssp TSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC-
T ss_pred ccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccc
Confidence 135644 7777632 1 12 3344444433322 3455699999999999987766654 211
Q ss_pred --CccccceEEEeCCCCChhh
Q 022749 189 --CSRAVRAAIFQAPVSDREY 207 (292)
Q Consensus 189 --~p~~V~glIL~aP~~d~~~ 207 (292)
..-.++|+++-.|+.++..
T Consensus 165 ~~~~inLkGi~IGng~~dp~~ 185 (415)
T PF00450_consen 165 DQPKINLKGIAIGNGWIDPRI 185 (415)
T ss_dssp -STTSEEEEEEEESE-SBHHH
T ss_pred cccccccccceecCccccccc
Confidence 1345899999999988754
No 222
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=81.26 E-value=13 Score=35.88 Aligned_cols=88 Identities=18% Similarity=0.211 Sum_probs=54.7
Q ss_pred CceEEEECCCCCCCCChh--hHHHHHHHHhh-CCcEEEEecccccCCCCCCCCCCC--------------------cHHH
Q 022749 94 QQQVIFIGGLTDGFFATE--YLEPLAIALDK-ERWSLVQFLMTSSYTGYGTSSLQQ--------------------DAME 150 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~--~~~~la~~L~~-~Gy~Vi~~~l~~D~~G~G~S~~~~--------------------~v~D 150 (292)
+..|+++-|-.+.+...+ ..-.|...|+. .+-+++ ++=.+|-|.-.... .+..
T Consensus 31 k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv----~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~n 106 (423)
T COG3673 31 KRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQV----IYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQN 106 (423)
T ss_pred ceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEE----EEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHH
Confidence 567777888665544332 22345666664 455665 44446766553222 1344
Q ss_pred HHHHHHHHHHh-cCCCcEEEEEeChHHHHHHHHHHH
Q 022749 151 IDQLISYLINK-DNSEGVVLLGHSTGCQDIVHYMRA 185 (292)
Q Consensus 151 l~~~i~~l~~~-~~~~~vvLvGHSmGG~ial~ya~~ 185 (292)
|..+..+|... .+.++|+++|.|.|+.+|.-+|.-
T Consensus 107 I~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 107 IREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 55566666543 367899999999999999887754
No 223
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=79.98 E-value=6.6 Score=38.29 Aligned_cols=90 Identities=18% Similarity=0.161 Sum_probs=61.1
Q ss_pred CCceEEEECCCCCCC----CChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEE
Q 022749 93 YQQQVIFIGGLTDGF----FATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVV 168 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~----~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vv 168 (292)
....||++||-+.+. .+..-|..+++.++++|+-.+ +|+ -|.|||.- +++|..-++.+++.. +-+
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~-~D~--AYQGF~~G-leeDa~~lR~~a~~~-------~~~ 238 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPF-FDI--AYQGFADG-LEEDAYALRLFAEVG-------PEL 238 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeee-eeh--hhhhhccc-hHHHHHHHHHHHHhC-------CcE
Confidence 346799999976433 345679999999999887654 444 45677664 555555555554432 227
Q ss_pred EEEeChHHHHHHHHHHHhccCccccceEEEeCC
Q 022749 169 LLGHSTGCQDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 169 LvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
++..|.-=...++ .+||.++++++.
T Consensus 239 lva~S~SKnfgLY--------gERVGa~~vva~ 263 (396)
T COG1448 239 LVASSFSKNFGLY--------GERVGALSVVAE 263 (396)
T ss_pred EEEehhhhhhhhh--------hhccceeEEEeC
Confidence 8888877666654 688888888766
No 224
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=79.49 E-value=18 Score=32.11 Aligned_cols=102 Identities=9% Similarity=0.089 Sum_probs=56.4
Q ss_pred eEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcH-HHHHHHHHHHHHhcCC--CcEEEEEe
Q 022749 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDA-MEIDQLISYLINKDNS--EGVVLLGH 172 (292)
Q Consensus 96 ~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v-~Dl~~~i~~l~~~~~~--~~vvLvGH 172 (292)
++|+|=|+.+ ...++...-++...+.|+.++.+.. +-.........+ .-++.+++.+.+.... .++++=..
T Consensus 1 plvvl~gW~g--A~~~hl~KY~~~Y~~~g~~il~~~~----~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~il~H~F 74 (240)
T PF05705_consen 1 PLVVLLGWMG--AKPKHLAKYSDLYQDPGFDILLVTS----PPADFFWPSKRLAPAADKLLELLSDSQSASPPPILFHSF 74 (240)
T ss_pred CEEEEEeCCC--CCHHHHHHHHHHHHhcCCeEEEEeC----CHHHHeeeccchHHHHHHHHHHhhhhccCCCCCEEEEEE
Confidence 4566667773 4455555556666668999985432 111110011222 2334455555443222 38999999
Q ss_pred ChHHHHHHHHHHH-h------ccCccccceEEEeCCCC
Q 022749 173 STGCQDIVHYMRA-N------AACSRAVRAAIFQAPVS 203 (292)
Q Consensus 173 SmGG~ial~ya~~-~------~~~p~~V~glIL~aP~~ 203 (292)
|.||......+.+ + ...-.+|+|+|+-+...
T Consensus 75 SnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~ 112 (240)
T PF05705_consen 75 SNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPG 112 (240)
T ss_pred ECchHHHHHHHHHHHHhcccccccccccceeEEeCCCC
Confidence 9988777766542 1 01123489999876543
No 225
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=79.45 E-value=1.5 Score=40.93 Aligned_cols=98 Identities=13% Similarity=0.141 Sum_probs=57.8
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCC-------cHHHH----HHHHHHHH-
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ-------DAMEI----DQLISYLI- 159 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~-------~v~Dl----~~~i~~l~- 159 (292)
.-++.-+++-|-+++.+..++ .|.+.+.+++...+ ...-+=||....+. .+.|+ ++.|+...
T Consensus 111 K~~~KOG~~a~tgdh~y~rr~--~L~~p~~k~~i~tm----vle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~ 184 (371)
T KOG1551|consen 111 KMADLCLSWALTGDHVYTRRL--VLSKPINKREIATM----VLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVK 184 (371)
T ss_pred CcCCeeEEEeecCCceeEeee--eecCchhhhcchhe----eeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 345666777777775554443 24555656677766 33446677654322 12332 12222221
Q ss_pred -----HhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEE
Q 022749 160 -----NKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIF 198 (292)
Q Consensus 160 -----~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL 198 (292)
...+..+..|+|-||||.+|-..-..+ +..|.-+=.
T Consensus 185 lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~---q~Pva~~p~ 225 (371)
T KOG1551|consen 185 LFTWSSADGLGNLNLVGRSMGGDIANQVGSLH---QKPVATAPC 225 (371)
T ss_pred hcccccccCcccceeeeeecccHHHHhhcccC---CCCcccccc
Confidence 345788999999999999998877655 455544433
No 226
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=79.43 E-value=5.4 Score=41.10 Aligned_cols=100 Identities=17% Similarity=0.134 Sum_probs=62.3
Q ss_pred CceEEEECCCCCCC---CC-hhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHh---c--CC
Q 022749 94 QQQVIFIGGLTDGF---FA-TEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINK---D--NS 164 (292)
Q Consensus 94 ~~~VV~vHG~~~g~---~s-~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~---~--~~ 164 (292)
+-.|+-.||-+--. .+ ..|.+..+.+| |..|+ ..||.=--....++..+++--..-|+.+. + -.
T Consensus 396 ~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPii----SVdYSLAPEaPFPRaleEv~fAYcW~inn~allG~Tg 468 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPII----SVDYSLAPEAPFPRALEEVFFAYCWAINNCALLGSTG 468 (880)
T ss_pred ceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeE----EeeeccCCCCCCCcHHHHHHHHHHHHhcCHHHhCccc
Confidence 33577789865211 12 34555555544 67888 55554344445667777877666776542 2 36
Q ss_pred CcEEEEEeChHHHHHHHHHHHhccCccc-cceEEEeC
Q 022749 165 EGVVLLGHSTGCQDIVHYMRANAACSRA-VRAAIFQA 200 (292)
Q Consensus 165 ~~vvLvGHSmGG~ial~ya~~~~~~p~~-V~glIL~a 200 (292)
++|+++|-|.||.+.+-.+.+...-.-| -+|++|.=
T Consensus 469 Eriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY 505 (880)
T KOG4388|consen 469 ERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAY 505 (880)
T ss_pred ceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEec
Confidence 7999999999999887776653211223 38888753
No 227
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=79.07 E-value=9.4 Score=42.63 Aligned_cols=92 Identities=18% Similarity=0.197 Sum_probs=56.6
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCC----CCCcHHHHHH-HHHHHHHhcCCCc
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS----LQQDAMEIDQ-LISYLINKDNSEG 166 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~----~~~~v~Dl~~-~i~~l~~~~~~~~ 166 (292)
.+.|++.|||-+- |+ ..-++.++..| ..|.||.-. ..+.++++.+ +|+.+++-.+..+
T Consensus 2121 se~~~~Ffv~pIE-G~--tt~l~~la~rl--------------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GP 2183 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIE-GF--TTALESLASRL--------------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGP 2183 (2376)
T ss_pred ccCCceEEEeccc-cc--hHHHHHHHhhc--------------CCcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCC
Confidence 4578999999876 22 22234444332 225666322 2233555544 3455555567889
Q ss_pred EEEEEeChHHHHHHHHHHHhccCccccceEEEeCC
Q 022749 167 VVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 167 vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
..|+|.|+|+.++...|....+ ......+|+...
T Consensus 2184 Yrl~GYSyG~~l~f~ma~~Lqe-~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2184 YRLAGYSYGACLAFEMASQLQE-QQSPAPLILLDG 2217 (2376)
T ss_pred eeeeccchhHHHHHHHHHHHHh-hcCCCcEEEecC
Confidence 9999999999999998865422 233455887643
No 228
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=78.67 E-value=2.2 Score=37.48 Aligned_cols=59 Identities=22% Similarity=0.256 Sum_probs=36.6
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHH
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLI 159 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~ 159 (292)
+.+|+++||-.|......+.+...+.|.+.|.+|- ...++|-|.+-. .+++.++.+||.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~----~~~~~g~gH~i~---~~~~~~~~~~l~ 213 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVE----FHEYPGGGHEIS---PEELRDLREFLE 213 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEE----EEEETT-SSS-----HHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEE----EEEcCCCCCCCC---HHHHHHHHHHHh
Confidence 56899999999877666667788899998887665 344455444322 345555555554
No 229
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=77.45 E-value=7.2 Score=34.35 Aligned_cols=52 Identities=15% Similarity=0.220 Sum_probs=39.7
Q ss_pred HHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 152 DQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 152 ~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
++.-.+++++.=....++-|-|||+..+..+.-++ |+...++|..+.+.+..
T Consensus 88 ~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrh---P~lftkvialSGvYdar 139 (227)
T COG4947 88 RAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRH---PHLFTKVIALSGVYDAR 139 (227)
T ss_pred HHHHHHHHHhhcCCCccccccchhhhhhhhhheeC---hhHhhhheeecceeeHH
Confidence 44445665542224577889999999999999999 99999999988876543
No 230
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=76.87 E-value=11 Score=33.33 Aligned_cols=48 Identities=15% Similarity=0.121 Sum_probs=32.3
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCC
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS 142 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S 142 (292)
+.++.||++-|+.+. +....-..+.+.|.+.|++++.+|- |-..||.+
T Consensus 20 ~~~~~viW~TGLSGs-GKSTiA~ale~~L~~~G~~~y~LDG--DnvR~gL~ 67 (197)
T COG0529 20 GQKGAVIWFTGLSGS-GKSTIANALEEKLFAKGYHVYLLDG--DNVRHGLN 67 (197)
T ss_pred CCCCeEEEeecCCCC-CHHHHHHHHHHHHHHcCCeEEEecC--hhHhhccc
Confidence 457899999999842 2233344677888889999996653 43445543
No 231
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=75.04 E-value=4.8 Score=41.40 Aligned_cols=50 Identities=20% Similarity=0.237 Sum_probs=31.7
Q ss_pred HHHHHHHHh-cC-CCcEEEEEeChHHHHHHHHHHHhc--cCc------cccceEEEeCCC
Q 022749 153 QLISYLINK-DN-SEGVVLLGHSTGCQDIVHYMRANA--ACS------RAVRAAIFQAPV 202 (292)
Q Consensus 153 ~~i~~l~~~-~~-~~~vvLvGHSmGG~ial~ya~~~~--~~p------~~V~glIL~aP~ 202 (292)
.+++.|... .+ ..+|+.+||||||..+-..+..-- ..| ..-.|+|+++..
T Consensus 512 ~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 512 ELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 445554432 34 678999999999998887766531 112 235678877643
No 232
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=72.76 E-value=27 Score=32.25 Aligned_cols=37 Identities=16% Similarity=0.337 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHh-cCCCcEEEEEeChHHHHHHHHHHH
Q 022749 149 MEIDQLISYLINK-DNSEGVVLLGHSTGCQDIVHYMRA 185 (292)
Q Consensus 149 ~Dl~~~i~~l~~~-~~~~~vvLvGHSmGG~ial~ya~~ 185 (292)
+.|.....+|.+. .+.++|+|+|.|.|+..|..++..
T Consensus 75 ~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 75 ARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 4455566666443 356789999999999999998764
No 233
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=71.03 E-value=16 Score=34.45 Aligned_cols=74 Identities=12% Similarity=0.126 Sum_probs=44.8
Q ss_pred cccCC-CCCCCCC------CCc---HHHHHHHHHHHHHh---cCCCcEEEEEeChHHHHHHHHHHHhcc-------Cccc
Q 022749 133 TSSYT-GYGTSSL------QQD---AMEIDQLISYLINK---DNSEGVVLLGHSTGCQDIVHYMRANAA-------CSRA 192 (292)
Q Consensus 133 ~~D~~-G~G~S~~------~~~---v~Dl~~~i~~l~~~---~~~~~vvLvGHSmGG~ial~ya~~~~~-------~p~~ 192 (292)
-.|.| |-|.|-- ..+ ++|+-.+++.+.++ +...+++|.|-|.||.-+-.+|.+-.. .+-.
T Consensus 6 fiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~in 85 (319)
T PLN02213 6 FLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPIN 85 (319)
T ss_pred EecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCcee
Confidence 45766 6666531 122 24444444333332 346789999999999877766654210 1236
Q ss_pred cceEEEeCCCCChh
Q 022749 193 VRAAIFQAPVSDRE 206 (292)
Q Consensus 193 V~glIL~aP~~d~~ 206 (292)
++|+++-.|+.++.
T Consensus 86 LkGi~IGNg~t~~~ 99 (319)
T PLN02213 86 LQGYMLGNPVTYMD 99 (319)
T ss_pred eeEEEeCCCCCCcc
Confidence 78999888877664
No 234
>PRK11460 putative hydrolase; Provisional
Probab=70.39 E-value=9.8 Score=33.95 Aligned_cols=59 Identities=12% Similarity=-0.022 Sum_probs=38.3
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCC--CCCCCCCCCcHHHHHHHHHHHHH
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYT--GYGTSSLQQDAMEIDQLISYLIN 160 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~--G~G~S~~~~~v~Dl~~~i~~l~~ 160 (292)
.+.+|+++||-.|..........+.+.|.+.|..+. ..-++ ||+.+ .++++++.+++.+
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~----~~~~~~~gH~i~-----~~~~~~~~~~l~~ 207 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVT----LDIVEDLGHAID-----PRLMQFALDRLRY 207 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeE----EEEECCCCCCCC-----HHHHHHHHHHHHH
Confidence 467899999999876666666678888988786654 22234 45443 3455555555544
No 235
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=67.97 E-value=22 Score=35.95 Aligned_cols=58 Identities=12% Similarity=0.091 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHH---hcC--CCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 149 MEIDQLISYLIN---KDN--SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 149 ~Dl~~~i~~l~~---~~~--~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
+|+..+.+.+.+ ++. ..+.+|+|-|+||+-+-.+|..-.++....+++|++.++.+..
T Consensus 177 ~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvlign 239 (498)
T COG2939 177 KDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGN 239 (498)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecC
Confidence 555555555432 122 3489999999999999988876521123467888777765443
No 236
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=67.01 E-value=33 Score=34.64 Aligned_cols=102 Identities=19% Similarity=0.301 Sum_probs=58.3
Q ss_pred EEE-EeCCC-CceEEEECCCC--CCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCC-C--CCcHHHHHHHHHHH
Q 022749 86 VAF-KTGDY-QQQVIFIGGLT--DGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS-L--QQDAMEIDQLISYL 158 (292)
Q Consensus 86 ~~y-~~g~~-~~~VV~vHG~~--~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~-~--~~~v~Dl~~~i~~l 158 (292)
++| .+|+- .|..|+.-|+- ||+.. |+ +.+.| |-..+ |-.|.|=-|-+= . ++.-+.|.++|+.-
T Consensus 279 ~yYFnPGD~KPPL~VYFSGyR~aEGFEg--y~--MMk~L---g~PfL---L~~DpRleGGaFYlGs~eyE~~I~~~I~~~ 348 (511)
T TIGR03712 279 IYYFNPGDFKPPLNVYFSGYRPAEGFEG--YF--MMKRL---GAPFL---LIGDPRLEGGAFYLGSDEYEQGIINVIQEK 348 (511)
T ss_pred EEecCCcCCCCCeEEeeccCcccCcchh--HH--HHHhc---CCCeE---EeeccccccceeeeCcHHHHHHHHHHHHHH
Confidence 444 45664 45578999975 34322 22 33433 44443 245666544331 1 12233455555554
Q ss_pred HHhcC--CCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCC
Q 022749 159 INKDN--SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 159 ~~~~~--~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
.+.++ ...++|-|-|||..-|++|+++. .-.++|+-=|.
T Consensus 349 L~~LgF~~~qLILSGlSMGTfgAlYYga~l-----~P~AIiVgKPL 389 (511)
T TIGR03712 349 LDYLGFDHDQLILSGLSMGTFGALYYGAKL-----SPHAIIVGKPL 389 (511)
T ss_pred HHHhCCCHHHeeeccccccchhhhhhcccC-----CCceEEEcCcc
Confidence 44444 45799999999999999999876 23455554454
No 237
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=60.89 E-value=73 Score=30.03 Aligned_cols=109 Identities=14% Similarity=0.071 Sum_probs=54.6
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCC---CCCCcHHHHHHHHHHHHH---h---cCC
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS---SLQQDAMEIDQLISYLIN---K---DNS 164 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S---~~~~~v~Dl~~~i~~l~~---~---~~~ 164 (292)
+.+||++---+.|+-+..... -.+++..-..+++++ .+++.---.+ +.+...+--.++++.+.+ . ...
T Consensus 32 R~~lvV~~pTGtGWVdp~a~~-a~E~l~~GD~A~va~--QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~R 108 (289)
T PF10081_consen 32 RKVLVVATPTGTGWVDPWAVD-ALEYLYGGDVAIVAM--QYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRR 108 (289)
T ss_pred cceEEEEcCCCCCccCHHHHh-HHHHHhCCCeEEEEe--ccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccC
Confidence 455555544444444333332 235555433444433 3333322211 122223333444444432 1 235
Q ss_pred CcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCCh
Q 022749 165 EGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 165 ~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~ 205 (292)
.|++|.|.|+|+.-+............+++|+++.+|....
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 68999999999875544221111124679999999986543
No 238
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=59.19 E-value=27 Score=35.56 Aligned_cols=41 Identities=20% Similarity=0.220 Sum_probs=30.9
Q ss_pred cCCCcEEEEEeChHHHHHHHHHHHhc--cCccccceEEEeCCC
Q 022749 162 DNSEGVVLLGHSTGCQDIVHYMRANA--ACSRAVRAAIFQAPV 202 (292)
Q Consensus 162 ~~~~~vvLvGHSmGG~ial~ya~~~~--~~p~~V~glIL~aP~ 202 (292)
+|..||.|||.|+|+-+..+.+.+-. ..-.-|..+||.+..
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaP 486 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAP 486 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCC
Confidence 58899999999999999987665321 113467889998653
No 239
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=58.91 E-value=23 Score=31.00 Aligned_cols=52 Identities=10% Similarity=0.088 Sum_probs=28.4
Q ss_pred HHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEEe
Q 022749 115 PLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGH 172 (292)
Q Consensus 115 ~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGH 172 (292)
.+|+.+++..-+++.+++..+ .+.....+-+..+++.++++++..+|+++-|
T Consensus 50 ~~a~~ia~~~a~~~~ld~~~N------~~~~~~~~~~~~fv~~iR~~hP~tPIllv~~ 101 (178)
T PF14606_consen 50 EVADLIAEIDADLIVLDCGPN------MSPEEFRERLDGFVKTIREAHPDTPILLVSP 101 (178)
T ss_dssp HHHHHHHHS--SEEEEEESHH------CCTTTHHHHHHHHHHHHHTT-SSS-EEEEE-
T ss_pred HHHHHHhcCCCCEEEEEeecC------CCHHHHHHHHHHHHHHHHHhCCCCCEEEEec
Confidence 455555555456665555333 1223344567777788877777778887765
No 240
>COG0400 Predicted esterase [General function prediction only]
Probab=57.86 E-value=23 Score=31.55 Aligned_cols=58 Identities=17% Similarity=0.130 Sum_probs=38.6
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCC-CCCCCCCCCcHHHHHHHHHHHH
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYT-GYGTSSLQQDAMEIDQLISYLI 159 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~-G~G~S~~~~~v~Dl~~~i~~l~ 159 (292)
...+|+++||--|-......-..+.++|.+.|..|- ..++. ||.- ..++++++.+|+.
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~----~~~~~~GH~i-----~~e~~~~~~~wl~ 203 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASGADVE----VRWHEGGHEI-----PPEELEAARSWLA 203 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEE----EEEecCCCcC-----CHHHHHHHHHHHH
Confidence 567899999987654444455678888888888887 44554 5532 2456666666664
No 241
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=57.77 E-value=30 Score=31.46 Aligned_cols=60 Identities=22% Similarity=0.277 Sum_probs=34.2
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCc-EEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEE
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERW-SLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLL 170 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy-~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLv 170 (292)
.+|++.||-.. ++..++.-+-..|.+.|| .|+... .-|| -+++.+++++++. +.++|.|+
T Consensus 139 ~~vlmgHGt~h--~s~~~YacLd~~~~~~~f~~v~v~~----ve~y---------P~~d~vi~~l~~~-~~~~v~L~ 199 (265)
T COG4822 139 ILVLMGHGTDH--HSNAAYACLDHVLDEYGFDNVFVAA----VEGY---------PLVDTVIEYLRKN-GIKEVHLI 199 (265)
T ss_pred EEEEEecCCCc--cHHHHHHHHHHHHHhcCCCceEEEE----ecCC---------CcHHHHHHHHHHc-CCceEEEe
Confidence 45667788663 334445556566677777 454221 1222 2566677887653 66666655
No 242
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=57.24 E-value=72 Score=31.31 Aligned_cols=77 Identities=8% Similarity=0.047 Sum_probs=41.3
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCC--CCcHHHHHHHHHHHH--HhcCCCcEEE
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL--QQDAMEIDQLISYLI--NKDNSEGVVL 169 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~--~~~v~Dl~~~i~~l~--~~~~~~~vvL 169 (292)
+.+||++.-+...+...+........|.+.|+.|+.+.- ....+|.... -.+.++|...+..+. +.+..+++++
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~~--g~la~~~~g~gr~~~~~~I~~~~~~~~~~~~l~gk~vlI 193 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPAS--GRLACGDVGPGRMAEPEEIVAAAERALSPKDLAGKRVLI 193 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCCC--ccccCCCcCCCCCCCHHHHHHHHHHHhhhcccCCCEEEE
Confidence 567777777664444444455667888889999984321 1111222221 234566655554332 2234456666
Q ss_pred EEe
Q 022749 170 LGH 172 (292)
Q Consensus 170 vGH 172 (292)
-|-
T Consensus 194 TgG 196 (399)
T PRK05579 194 TAG 196 (399)
T ss_pred eCC
Confidence 665
No 243
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=55.79 E-value=72 Score=25.09 Aligned_cols=82 Identities=16% Similarity=0.119 Sum_probs=46.8
Q ss_pred hhhHHHHHHHHhhCCcEEEEecccccCCCCCCC--CC-CCcHH-HHHHHHHHHHHhcCCCcEEEEEeChHHHHH--HHHH
Q 022749 110 TEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS--SL-QQDAM-EIDQLISYLINKDNSEGVVLLGHSTGCQDI--VHYM 183 (292)
Q Consensus 110 ~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S--~~-~~~v~-Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ia--l~ya 183 (292)
+..+..+.++|...||..=. ..++.+|.+ .. ....+ -=.+.++.+.+.++..+++|||-|--.=.- ...+
T Consensus 10 wnly~~l~~Fl~~~~~P~G~----~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia 85 (100)
T PF09949_consen 10 WNLYPFLRDFLRRNGFPAGP----LLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIA 85 (100)
T ss_pred HHHHHHHHHHHHhcCCCCCc----eEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHH
Confidence 44456677788777776552 233445432 11 11111 122344555555688999999998554322 2345
Q ss_pred HHhccCccccceEEE
Q 022749 184 RANAACSRAVRAAIF 198 (292)
Q Consensus 184 ~~~~~~p~~V~glIL 198 (292)
.++ |++|.++.+
T Consensus 86 ~~~---P~~i~ai~I 97 (100)
T PF09949_consen 86 RRF---PGRILAIYI 97 (100)
T ss_pred HHC---CCCEEEEEE
Confidence 566 999988754
No 244
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=55.65 E-value=36 Score=32.29 Aligned_cols=70 Identities=20% Similarity=0.252 Sum_probs=42.2
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCC----CCC-------CCC---CCCcHHHHHHHHHHHH
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYT----GYG-------TSS---LQQDAMEIDQLISYLI 159 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~----G~G-------~S~---~~~~v~Dl~~~i~~l~ 159 (292)
-|.|+|.-|.+ ...+.|++.||.|+.+|...|.. --| .-+ +-..-+.|.+.++...
T Consensus 252 vPmi~fakG~g----------~~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv 321 (359)
T KOG2872|consen 252 VPMILFAKGSG----------GALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMV 321 (359)
T ss_pred CceEEEEcCcc----------hHHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHH
Confidence 47899999876 23477888999999877766642 112 111 1123456666666665
Q ss_pred HhcCCCc-EEEEEeC
Q 022749 160 NKDNSEG-VVLLGHS 173 (292)
Q Consensus 160 ~~~~~~~-vvLvGHS 173 (292)
++.|..+ |.=+||-
T Consensus 322 ~~fG~~ryI~NLGHG 336 (359)
T KOG2872|consen 322 KDFGKSRYIANLGHG 336 (359)
T ss_pred HHhCccceEEecCCC
Confidence 5556444 3345763
No 245
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=55.61 E-value=89 Score=30.60 Aligned_cols=89 Identities=7% Similarity=0.079 Sum_probs=49.3
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCC--CCCcHHHHHHHHHHHH-H--hcCCCcEEE
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS--LQQDAMEIDQLISYLI-N--KDNSEGVVL 169 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~--~~~~v~Dl~~~i~~l~-~--~~~~~~vvL 169 (292)
.+||++.-+.+.+...+........|.+.|+.|+.+.- .+..+|... .....+|+...+.... . .+..+++++
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~--g~~ac~~~g~g~~~~~~~i~~~v~~~~~~~~~~~~~~vli 190 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDS--GLLACGDEGKGRLAEPETIVKAAEREFSPKEDLEGKRVLI 190 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCC--cccccccccCCCCCCHHHHHHHHHHHHhhccccCCceEEE
Confidence 67888887776555444555667788888999883321 111112221 2344566644443322 1 234456666
Q ss_pred EEe------------------ChHHHHHHHHHHH
Q 022749 170 LGH------------------STGCQDIVHYMRA 185 (292)
Q Consensus 170 vGH------------------SmGG~ial~ya~~ 185 (292)
-|- .||..++..++.+
T Consensus 191 t~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~ 224 (390)
T TIGR00521 191 TAGPTREPIDPVRFISNLSSGKMGLALAEAAYKR 224 (390)
T ss_pred ecCCccCCCCceeeecCCCcchHHHHHHHHHHHC
Confidence 665 3667777666554
No 246
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=55.24 E-value=14 Score=37.35 Aligned_cols=109 Identities=16% Similarity=0.235 Sum_probs=58.2
Q ss_pred CceEEEECCCC--CCCCChhhHHHHHHHHhhCCcEEEEecc--cccCCCC----CCCCCCCc--HHHHHHHHHHHHHh--
Q 022749 94 QQQVIFIGGLT--DGFFATEYLEPLAIALDKERWSLVQFLM--TSSYTGY----GTSSLQQD--AMEIDQLISYLINK-- 161 (292)
Q Consensus 94 ~~~VV~vHG~~--~g~~s~~~~~~la~~L~~~Gy~Vi~~~l--~~D~~G~----G~S~~~~~--v~Dl~~~i~~l~~~-- 161 (292)
..++|+|-|-+ .|.-+...+. .+.|+..+ +||.+++ +..--|+ |..+.+.. .-|-+-+++|+++.
T Consensus 135 ~tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~e-nvIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~ 211 (601)
T KOG4389|consen 135 LTVLVWIYGGGFYSGTPSLDVYD--GKFLAAVE-NVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIA 211 (601)
T ss_pred ceEEEEEEcCccccCCcceeeec--cceeeeec-cEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHH
Confidence 34667775533 2222222222 35666555 4544432 2221122 33333333 34556667788653
Q ss_pred -c--CCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEeCCCCChh
Q 022749 162 -D--NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (292)
Q Consensus 162 -~--~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~aP~~d~~ 206 (292)
. +..+|.|+|.|.|+.-+..-+..- .....++..||++......
T Consensus 212 aFGGnp~~vTLFGESAGaASv~aHLlsP-~S~glF~raIlQSGS~~~p 258 (601)
T KOG4389|consen 212 AFGGNPSRVTLFGESAGAASVVAHLLSP-GSRGLFHRAILQSGSLNNP 258 (601)
T ss_pred HhCCCcceEEEeccccchhhhhheecCC-CchhhHHHHHhhcCCCCCC
Confidence 2 456899999999988665544331 1234578888887655443
No 247
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=54.77 E-value=65 Score=29.30 Aligned_cols=53 Identities=17% Similarity=0.176 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhcc-----CccccceEEEeCCCCCh
Q 022749 151 IDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAA-----CSRAVRAAIFQAPVSDR 205 (292)
Q Consensus 151 l~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~-----~p~~V~glIL~aP~~d~ 205 (292)
++-+.+++++.-+.+ -|+|.|-|+.++..++..... ....++=+|+++....+
T Consensus 92 l~yl~~~i~enGPFD--GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~ 149 (230)
T KOG2551|consen 92 LEYLEDYIKENGPFD--GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFP 149 (230)
T ss_pred HHHHHHHHHHhCCCc--cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCC
Confidence 555556665432222 488999999999988772110 11346778888776543
No 248
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=53.39 E-value=1.5e+02 Score=29.87 Aligned_cols=60 Identities=10% Similarity=0.108 Sum_probs=38.4
Q ss_pred HHHHHHHH-HHHHH--hcCCCcEEEEEeChHHHHHHHHHHHh---c----cCccccceEEEeCCCCChhh
Q 022749 148 AMEIDQLI-SYLIN--KDNSEGVVLLGHSTGCQDIVHYMRAN---A----ACSRAVRAAIFQAPVSDREY 207 (292)
Q Consensus 148 v~Dl~~~i-~~l~~--~~~~~~vvLvGHSmGG~ial~ya~~~---~----~~p~~V~glIL~aP~~d~~~ 207 (292)
++|+..++ +|+.+ ++...+++|.|-|++|..+-.+|++- . ...-.++|+++=.|..++..
T Consensus 148 A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~ 217 (454)
T KOG1282|consen 148 AKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEI 217 (454)
T ss_pred HHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCccc
Confidence 34554443 44432 34567899999999997776666541 1 11246789998888776653
No 249
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=53.19 E-value=86 Score=30.39 Aligned_cols=103 Identities=9% Similarity=0.050 Sum_probs=57.0
Q ss_pred eEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhc--CCCcEEEEEeC
Q 022749 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKD--NSEGVVLLGHS 173 (292)
Q Consensus 96 ~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~--~~~~vvLvGHS 173 (292)
+||++=|+.+ ...++....+....+.||.|+.+......-....+.........-..+..+.+.+ ...++++--.|
T Consensus 40 ~Iv~~~gWag--~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS 117 (350)
T KOG2521|consen 40 PIVVLLGWAG--AIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVFS 117 (350)
T ss_pred cEEEEeeecc--ccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEec
Confidence 4444445442 4556666777778888999995543233333444444433344433343333322 35577888999
Q ss_pred hHHHHHHHHH-HHhcc----CccccceEEEeC
Q 022749 174 TGCQDIVHYM-RANAA----CSRAVRAAIFQA 200 (292)
Q Consensus 174 mGG~ial~ya-~~~~~----~p~~V~glIL~a 200 (292)
|||...+... .+... .-+.+.++|..+
T Consensus 118 ~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS 149 (350)
T KOG2521|consen 118 GNGVRLMYSISLQLIKHEPKAAQLSGGIIFDS 149 (350)
T ss_pred CCceeehHHHHHHHhhcCchhHhhcCCceEec
Confidence 9998877654 22111 123456677654
No 250
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=52.31 E-value=45 Score=28.96 Aligned_cols=62 Identities=11% Similarity=0.112 Sum_probs=35.2
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecc---cccCCCCCCCCCCCcHHHHHHHHHH
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM---TSSYTGYGTSSLQQDAMEIDQLISY 157 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l---~~D~~G~G~S~~~~~v~Dl~~~i~~ 157 (292)
.+.+||++.-+...+...+......+.|++.|+.|+.+.- +....|+|+ ..+.+|+.+++..
T Consensus 112 ~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~~g~la~~~~g~g~---~~~~~~i~~~v~~ 176 (182)
T PRK07313 112 ATTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPKEGLLACGDEGYGA---LADIETILETIEN 176 (182)
T ss_pred CCCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCCCCccccCCccCCC---CCCHHHHHHHHHH
Confidence 3567777776554333444455667889999999984431 112223333 4455666555544
No 251
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=51.43 E-value=2.1e+02 Score=26.86 Aligned_cols=85 Identities=19% Similarity=0.188 Sum_probs=49.9
Q ss_pred HHHhhCCcEEEEecc--cccCCCCCCCC-CCCcHHHHHHHHHHHHH--hcCCCcEEEEEeChHHHHHH---HHHHHhccC
Q 022749 118 IALDKERWSLVQFLM--TSSYTGYGTSS-LQQDAMEIDQLISYLIN--KDNSEGVVLLGHSTGCQDIV---HYMRANAAC 189 (292)
Q Consensus 118 ~~L~~~Gy~Vi~~~l--~~D~~G~G~S~-~~~~v~Dl~~~i~~l~~--~~~~~~vvLvGHSmGG~ial---~ya~~~~~~ 189 (292)
..|+..|++|..+.. .+.|+|||... ...-.++++++++.+.+ ..+.-..++-|.=-....+. .+..+..
T Consensus 22 f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v~~~e~l~~~l~~l~~~~~~~~~davltGYlgs~~qv~~i~~~v~~vk-- 99 (281)
T COG2240 22 FPLQRLGLDVWAVPTVQFSNHTGYGKWTGIVMPPEQLADLLNGLEAIDKLGECDAVLTGYLGSAEQVRAIAGIVKAVK-- 99 (281)
T ss_pred HHHHHcCCceeeeceEEecCCCCCCCCCCcCCCHHHHHHHHHHHHhcccccccCEEEEccCCCHHHHHHHHHHHHHHh--
Confidence 446678999986552 36899999854 33345778888877755 34444677777522222221 2222221
Q ss_pred ccccceEEEeCCCCC
Q 022749 190 SRAVRAAIFQAPVSD 204 (292)
Q Consensus 190 p~~V~glIL~aP~~d 204 (292)
...-+.++++.|++.
T Consensus 100 ~~~P~~~~l~DPVMG 114 (281)
T COG2240 100 EANPNALYLCDPVMG 114 (281)
T ss_pred ccCCCeEEEeCCccc
Confidence 233457788888753
No 252
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=50.68 E-value=98 Score=29.34 Aligned_cols=31 Identities=23% Similarity=0.268 Sum_probs=24.1
Q ss_pred EEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecc
Q 022749 97 VIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (292)
Q Consensus 97 VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l 132 (292)
|||||.-..+ .|+.+++.|.++|+.|..+..
T Consensus 2 il~~~~~~p~-----~~~~la~~L~~~G~~v~~~~~ 32 (396)
T cd03818 2 ILFVHQNFPG-----QFRHLAPALAAQGHEVVFLTE 32 (396)
T ss_pred EEEECCCCch-----hHHHHHHHHHHCCCEEEEEec
Confidence 7899986542 257899999999999986543
No 253
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=50.17 E-value=19 Score=31.39 Aligned_cols=77 Identities=14% Similarity=0.222 Sum_probs=46.8
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEEeCh
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHST 174 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGHSm 174 (292)
..||+..|++ .....+..+. |. .++.++ +.+||+.... ++ |+. ..+.+.||.+||
T Consensus 12 ~LIvyFaGwg---tpps~v~HLi--lp-eN~dl~---lcYDY~dl~l-----df-Dfs----------Ay~hirlvAwSM 66 (214)
T COG2830 12 HLIVYFAGWG---TPPSAVNHLI--LP-ENHDLL---LCYDYQDLNL-----DF-DFS----------AYRHIRLVAWSM 66 (214)
T ss_pred EEEEEEecCC---CCHHHHhhcc--CC-CCCcEE---EEeehhhcCc-----cc-chh----------hhhhhhhhhhhH
Confidence 4888899998 3333333332 23 467765 2677764422 11 111 235677999999
Q ss_pred HHHHHHHHHHHhccCccccceEEEeCC
Q 022749 175 GCQDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 175 GG~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
|-.+|-+.++.. +++..+.+..
T Consensus 67 GVwvAeR~lqg~-----~lksatAiNG 88 (214)
T COG2830 67 GVWVAERVLQGI-----RLKSATAING 88 (214)
T ss_pred HHHHHHHHHhhc-----cccceeeecC
Confidence 999999988765 4665555543
No 254
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=48.87 E-value=26 Score=31.33 Aligned_cols=60 Identities=18% Similarity=0.236 Sum_probs=43.8
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHH
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISY 157 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~ 157 (292)
.++|+..||-.|-+-..++-..-+++|...|.++. -.-|+|-+.+..++..+|+..++..
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~----f~~y~g~~h~~~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVT----FKPYPGLGHSTSPQELDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCcee----eeecCCccccccHHHHHHHHHHHHH
Confidence 56799999988765445555566788888888865 5677888888777666776666654
No 255
>PRK12467 peptide synthase; Provisional
Probab=48.42 E-value=1e+02 Score=39.02 Aligned_cols=98 Identities=12% Similarity=0.004 Sum_probs=54.7
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCC-CCCcHHHH-HHHHHHHHHhcCCCcEEEEE
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS-LQQDAMEI-DQLISYLINKDNSEGVVLLG 171 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~-~~~~v~Dl-~~~i~~l~~~~~~~~vvLvG 171 (292)
.+.|++.|.... ....+..++..|.. +..|+.+.. ++.-.-. .....+++ ...+++++...+..+..+.|
T Consensus 3692 ~~~l~~~h~~~r---~~~~~~~l~~~l~~-~~~~~~l~~----~~~~~d~~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g 3763 (3956)
T PRK12467 3692 FPALFCRHEGLG---TVFDYEPLAVILEG-DRHVLGLTC----RHLLDDGWQDTSLQAMAVQYADYILWQQAKGPYGLLG 3763 (3956)
T ss_pred ccceeeechhhc---chhhhHHHHHHhCC-CCcEEEEec----cccccccCCccchHHHHHHHHHHHHHhccCCCeeeee
Confidence 355889998763 22234567777764 567774432 2211000 11122222 23444444444567899999
Q ss_pred eChHHHHHHHHHHHhccCccccceEEEe
Q 022749 172 HSTGCQDIVHYMRANAACSRAVRAAIFQ 199 (292)
Q Consensus 172 HSmGG~ial~ya~~~~~~p~~V~glIL~ 199 (292)
+|+||.++..++..-....+.++-+.++
T Consensus 3764 ~s~g~~~a~~~~~~l~~~g~~~~~~~~~ 3791 (3956)
T PRK12467 3764 WSLGGTLARLVAELLEREGESEAFLGLF 3791 (3956)
T ss_pred eecchHHHHHHHHHHHHcCCceeEEEEE
Confidence 9999999998876532223445544443
No 256
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=47.65 E-value=29 Score=27.93 Aligned_cols=24 Identities=8% Similarity=0.239 Sum_probs=12.6
Q ss_pred CceEEEEe----CCCCceEEEECCCCCC
Q 022749 83 PVQVAFKT----GDYQQQVIFIGGLTDG 106 (292)
Q Consensus 83 ~~~~~y~~----g~~~~~VV~vHG~~~g 106 (292)
++.++|.. +....+|||+||+.++
T Consensus 77 g~~iHFih~rs~~~~aiPLll~HGWPgS 104 (112)
T PF06441_consen 77 GLDIHFIHVRSKRPNAIPLLLLHGWPGS 104 (112)
T ss_dssp TEEEEEEEE--S-TT-EEEEEE--SS--
T ss_pred eEEEEEEEeeCCCCCCeEEEEECCCCcc
Confidence 55566643 2346789999999953
No 257
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=46.01 E-value=16 Score=26.32 Aligned_cols=13 Identities=23% Similarity=0.363 Sum_probs=7.2
Q ss_pred CCceEEEECCCCC
Q 022749 93 YQQQVIFIGGLTD 105 (292)
Q Consensus 93 ~~~~VV~vHG~~~ 105 (292)
.+++|++.||+..
T Consensus 42 ~k~pVll~HGL~~ 54 (63)
T PF04083_consen 42 KKPPVLLQHGLLQ 54 (63)
T ss_dssp T--EEEEE--TT-
T ss_pred CCCcEEEECCccc
Confidence 5789999999984
No 258
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=45.51 E-value=64 Score=32.38 Aligned_cols=79 Identities=13% Similarity=0.164 Sum_probs=48.7
Q ss_pred CCceEEEECCCCCCC----CChhhHHHHHHHHhh------CCcEEEEecccccCCCCCCCCC-CCcHHHHHHHHHHHHHh
Q 022749 93 YQQQVIFIGGLTDGF----FATEYLEPLAIALDK------ERWSLVQFLMTSSYTGYGTSSL-QQDAMEIDQLISYLINK 161 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~----~s~~~~~~la~~L~~------~Gy~Vi~~~l~~D~~G~G~S~~-~~~v~Dl~~~i~~l~~~ 161 (292)
.+..||+-||+.|.. .+..|++.+.+.+.. .-||++. .---+|..... ....+-+.++++|+.+
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~----vPGm~HC~gG~g~~~~d~l~aL~~WVE~- 426 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFM----VPGMGHCGGGPGPDPFDALTALVDWVEN- 426 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEe----cCCCcccCCCCCCCCCCHHHHHHHHHhC-
Confidence 467899999999865 446788888887743 2466662 22223333222 3334667888888853
Q ss_pred cCCCcEEEEEeChHHH
Q 022749 162 DNSEGVVLLGHSTGCQ 177 (292)
Q Consensus 162 ~~~~~vvLvGHSmGG~ 177 (292)
+..+-.|++......
T Consensus 427 -G~AP~~l~at~~~~~ 441 (474)
T PF07519_consen 427 -GKAPETLVATKFDND 441 (474)
T ss_pred -CCCCCeeEEEEecCC
Confidence 556666666655443
No 259
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=43.36 E-value=73 Score=28.85 Aligned_cols=41 Identities=17% Similarity=0.161 Sum_probs=29.0
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecc
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l 132 (292)
++++.|.||.=-+-......|.+...+.|++.|..|..+++
T Consensus 30 g~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 30 GKRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CCCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 34678888876553222345777888999999999986655
No 260
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=43.32 E-value=1.2e+02 Score=27.55 Aligned_cols=50 Identities=16% Similarity=0.229 Sum_probs=31.9
Q ss_pred HHHHHHHhhCCcEEEEeccc--------ccCCCCCCC-CCCCc---HHHHHHHHHHHHHhcC
Q 022749 114 EPLAIALDKERWSLVQFLMT--------SSYTGYGTS-SLQQD---AMEIDQLISYLINKDN 163 (292)
Q Consensus 114 ~~la~~L~~~Gy~Vi~~~l~--------~D~~G~G~S-~~~~~---v~Dl~~~i~~l~~~~~ 163 (292)
+.++..|++.|++|+..|+. -+++|+|.. ...-| .+|++..++...+.++
T Consensus 28 rAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g 89 (256)
T KOG1200|consen 28 RAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLG 89 (256)
T ss_pred HHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcC
Confidence 56888999999999977653 356777643 23322 4566665555544444
No 261
>COG3562 KpsS Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane]
Probab=43.13 E-value=1.3e+02 Score=29.19 Aligned_cols=75 Identities=15% Similarity=0.333 Sum_probs=52.4
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccc-c---CCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEE
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTS-S---YTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLL 170 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~-D---~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLv 170 (292)
..++++-|-. ..++.+++..|+..|-+|+.+++-. | +|--|.-...+..+|..+.++.+..+..++.++++
T Consensus 14 ~NflllQGPv-----g~ff~~la~~le~~~~~v~k~NfN~GD~~fyp~~~t~~~~~~~D~~~~~~r~f~~~hsi~aivlf 88 (403)
T COG3562 14 ENFLLLQGPV-----GPFFQELASWLELNGKRVFKINFNAGDSTFYPQAGTVVYNDNLDDFPTFLRKFIAQHSIDAIVLF 88 (403)
T ss_pred cceEeeeCCc-----chHHHHHHHHHHhcCceEEEEeecCCCceeeecCCccccccchhHHHHHHHHHHHhccCCceEEe
Confidence 6889998866 2457889999999999999877621 1 12122222344567788888877666688899999
Q ss_pred EeCh
Q 022749 171 GHST 174 (292)
Q Consensus 171 GHSm 174 (292)
|-=.
T Consensus 89 gd~R 92 (403)
T COG3562 89 GDTR 92 (403)
T ss_pred ccch
Confidence 8543
No 262
>PRK10566 esterase; Provisional
Probab=42.54 E-value=58 Score=28.43 Aligned_cols=60 Identities=13% Similarity=0.153 Sum_probs=37.2
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCc--EEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHH
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERW--SLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLIN 160 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy--~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~ 160 (292)
..+++++||--|.......-..+.+.|.++|. .+..+ .+.-.||+.. .+.+++.+++|.+
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~--~~~~~~H~~~-----~~~~~~~~~fl~~ 247 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCL--WEPGVRHRIT-----PEALDAGVAFFRQ 247 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEE--ecCCCCCccC-----HHHHHHHHHHHHh
Confidence 45799999988766555556677888887765 23311 2233455532 3456777777753
No 263
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=42.30 E-value=57 Score=25.61 Aligned_cols=59 Identities=17% Similarity=0.196 Sum_probs=32.5
Q ss_pred eEEEECCCCCCCCChhhHHHHHHHHhhCC-cEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEE
Q 022749 96 QVIFIGGLTDGFFATEYLEPLAIALDKER-WSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLL 170 (292)
Q Consensus 96 ~VV~vHG~~~g~~s~~~~~~la~~L~~~G-y~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLv 170 (292)
.|++-||--+. ....+..+++.|.+++ ..|. .|+=.. . -+++++++.+.++ +.++|+|+
T Consensus 3 illvgHGSr~~--~~~~~~~l~~~l~~~~~~~v~--------~~~lE~--~---P~i~~~l~~l~~~-G~~~i~lv 62 (103)
T cd03413 3 VVFMGHGTDHP--SNAVYAALEYVLREEDPANVF--------VGTVEG--Y---PGLDDVLAKLKKA-GIKKVTLM 62 (103)
T ss_pred EEEEECCCCch--hhhHHHHHHHHHHhcCCCcEE--------EEEEcC--C---CCHHHHHHHHHHc-CCCEEEEE
Confidence 45666997742 2455677888887654 3343 111110 1 2355566665443 67777776
No 264
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=41.99 E-value=41 Score=30.83 Aligned_cols=23 Identities=13% Similarity=-0.067 Sum_probs=19.0
Q ss_pred hcCCCcEEEEEeChHHHHHHHHH
Q 022749 161 KDNSEGVVLLGHSTGCQDIVHYM 183 (292)
Q Consensus 161 ~~~~~~vvLvGHSmGG~ial~ya 183 (292)
+.+.++..++|||+|=..|+..+
T Consensus 72 ~~g~~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 72 ALLPRPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred hcCCCCcEEeecCHHHHHHHHHh
Confidence 45788999999999998777654
No 265
>PRK10279 hypothetical protein; Provisional
Probab=41.94 E-value=33 Score=32.33 Aligned_cols=32 Identities=22% Similarity=0.123 Sum_probs=24.8
Q ss_pred HHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHh
Q 022749 154 LISYLINKDNSEGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 154 ~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~ 186 (292)
+++.|.+ .++..-.+.|-|+|+.++..||...
T Consensus 23 VL~aL~E-~gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 23 VINALKK-VGIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHH-cCCCcCEEEEEcHHHHHHHHHHcCC
Confidence 3455544 4777889999999999999999653
No 266
>PRK05568 flavodoxin; Provisional
Probab=41.74 E-value=1.8e+02 Score=23.24 Aligned_cols=65 Identities=9% Similarity=0.186 Sum_probs=34.3
Q ss_pred ChhhHHHHHHHHhhCCcEEEEecccc---------cCCCCCCCCCCCcH---HHHHHHHHHHHHhcCCCcEEEEEeC
Q 022749 109 ATEYLEPLAIALDKERWSLVQFLMTS---------SYTGYGTSSLQQDA---MEIDQLISYLINKDNSEGVVLLGHS 173 (292)
Q Consensus 109 s~~~~~~la~~L~~~Gy~Vi~~~l~~---------D~~G~G~S~~~~~v---~Dl~~~i~~l~~~~~~~~vvLvGHS 173 (292)
+...-+.+++.+.+.|..|..+++.- |....|.+.....+ ..+..+++.+......+++.++|.+
T Consensus 15 T~~~a~~i~~~~~~~g~~v~~~~~~~~~~~~~~~~d~iilgsp~y~~~~~~~~~~~~f~~~~~~~~~~k~~~~f~t~ 91 (142)
T PRK05568 15 TEAMANLIAEGAKENGAEVKLLNVSEASVDDVKGADVVALGSPAMGDEVLEEGEMEPFVESISSLVKGKKLVLFGSY 91 (142)
T ss_pred HHHHHHHHHHHHHHCCCeEEEEECCCCCHHHHHhCCEEEEECCccCcccccchhHHHHHHHhhhhhCCCEEEEEEcc
Confidence 34444556677766777766444321 22223333322221 2456666666443456788999884
No 267
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=41.69 E-value=3e+02 Score=27.28 Aligned_cols=35 Identities=23% Similarity=0.240 Sum_probs=28.5
Q ss_pred cCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEe
Q 022749 162 DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQ 199 (292)
Q Consensus 162 ~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~ 199 (292)
..+.-|+=+|-|+|..++...++.. |--+-++++.
T Consensus 92 g~i~Gvi~~GGs~GT~lat~aMr~L---PiG~PKlmVS 126 (403)
T PF06792_consen 92 GKIDGVIGIGGSGGTALATAAMRAL---PIGFPKLMVS 126 (403)
T ss_pred CCccEEEEecCCccHHHHHHHHHhC---CCCCCeEEEE
Confidence 3467789999999999999988876 7777777763
No 268
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=40.88 E-value=65 Score=24.19 Aligned_cols=62 Identities=16% Similarity=0.199 Sum_probs=30.3
Q ss_pred eEEEECCCCCCCCChhhHHHHHHHHhhC--CcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEE
Q 022749 96 QVIFIGGLTDGFFATEYLEPLAIALDKE--RWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLL 170 (292)
Q Consensus 96 ~VV~vHG~~~g~~s~~~~~~la~~L~~~--Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLv 170 (292)
.|+.-||....-........+++.|.++ ++.|. .++-.. ... ++.++++.+.++ +.++|+++
T Consensus 2 lllv~HGs~~~s~~~~~~~~~~~~l~~~~~~~~v~--------~a~~~~-~~P---~i~~~l~~l~~~-g~~~vvvv 65 (101)
T cd03409 2 LLVVGHGSPYKDPYKKDIEAQAHNLAESLPDFPYY--------VGFQSG-LGP---DTEEAIRELAEE-GYQRVVIV 65 (101)
T ss_pred EEEEECCCCCCccHHHHHHHHHHHHHHHCCCCCEE--------EEEECC-CCC---CHHHHHHHHHHc-CCCeEEEE
Confidence 4666788774201123455677777653 23333 111110 122 344566666543 66676665
No 269
>PLN02496 probable phosphopantothenoylcysteine decarboxylase
Probab=40.65 E-value=94 Score=27.89 Aligned_cols=37 Identities=11% Similarity=0.190 Sum_probs=28.3
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEe
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQF 130 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~ 130 (292)
+.+|+++..|...++..+..+...+.|.+.|+.|+.+
T Consensus 132 ~~Pv~iaPaMN~~Mw~~Pat~~nl~~L~~~G~~vi~P 168 (209)
T PLN02496 132 SKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPP 168 (209)
T ss_pred CCCEEEEeCCCHHHHhCHHHHHHHHHHHHCCCEEECC
Confidence 5788999998766555555666678899999999854
No 270
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=40.50 E-value=39 Score=30.07 Aligned_cols=35 Identities=9% Similarity=0.283 Sum_probs=25.0
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEe
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQF 130 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~ 130 (292)
...||++|...+ .+...+..+++.|.++||+++.+
T Consensus 186 ~g~IiLlHd~~~--~t~~aL~~ii~~lk~~Gy~fvtl 220 (224)
T TIGR02884 186 PGAILLLHAVSK--DNAEALDKIIKDLKEQGYTFKSL 220 (224)
T ss_pred CCcEEEEECCCC--CHHHHHHHHHHHHHHCCCEEEEh
Confidence 346888887432 34566778889999899998843
No 271
>PF03283 PAE: Pectinacetylesterase
Probab=40.22 E-value=87 Score=30.33 Aligned_cols=38 Identities=18% Similarity=0.192 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHh-c-CCCcEEEEEeChHHHHHHHHHHH
Q 022749 148 AMEIDQLISYLINK-D-NSEGVVLLGHSTGCQDIVHYMRA 185 (292)
Q Consensus 148 v~Dl~~~i~~l~~~-~-~~~~vvLvGHSmGG~ial~ya~~ 185 (292)
..-+++++++|..+ + ..++|+|-|-|.||.=++..+..
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHH
Confidence 35678888988765 2 35789999999999988876543
No 272
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=40.19 E-value=45 Score=30.42 Aligned_cols=24 Identities=17% Similarity=0.064 Sum_probs=19.6
Q ss_pred HhcCCCcEEEEEeChHHHHHHHHH
Q 022749 160 NKDNSEGVVLLGHSTGCQDIVHYM 183 (292)
Q Consensus 160 ~~~~~~~vvLvGHSmGG~ial~ya 183 (292)
.+.+.++-.++|||+|=..|+..+
T Consensus 77 ~~~Gi~p~~~~GhSlGE~aA~~~a 100 (298)
T smart00827 77 RSWGVRPDAVVGHSLGEIAAAYVA 100 (298)
T ss_pred HHcCCcccEEEecCHHHHHHHHHh
Confidence 346888999999999998887654
No 273
>KOG1434 consensus Meiotic recombination protein Dmc1 [Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]
Probab=40.06 E-value=13 Score=34.71 Aligned_cols=29 Identities=24% Similarity=0.340 Sum_probs=21.0
Q ss_pred HHHHHHHHhhC-CcEEEEec-----ccccCCCCCC
Q 022749 113 LEPLAIALDKE-RWSLVQFL-----MTSSYTGYGT 141 (292)
Q Consensus 113 ~~~la~~L~~~-Gy~Vi~~~-----l~~D~~G~G~ 141 (292)
...+.+.|.++ .|+++.+| ++.||-|.|.
T Consensus 199 v~~L~~~~se~g~~rlvIVDsIma~FRvDy~grge 233 (335)
T KOG1434|consen 199 VYLLGDFLSEHGKYRLVIVDSIMALFRVDYDGRGE 233 (335)
T ss_pred HHHHHHHHhhcCcEEEEEEeceehheeeccccccc
Confidence 34566777776 48887766 6788888885
No 274
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=39.75 E-value=43 Score=30.31 Aligned_cols=22 Identities=18% Similarity=0.087 Sum_probs=18.1
Q ss_pred cC-CCcEEEEEeChHHHHHHHHH
Q 022749 162 DN-SEGVVLLGHSTGCQDIVHYM 183 (292)
Q Consensus 162 ~~-~~~vvLvGHSmGG~ial~ya 183 (292)
.+ ..+..++|||+|=..|+..+
T Consensus 79 ~g~i~p~~v~GhS~GE~aAa~~a 101 (290)
T TIGR00128 79 QGGLKPDFAAGHSLGEYSALVAA 101 (290)
T ss_pred cCCCCCCEEeecCHHHHHHHHHh
Confidence 45 88999999999998776654
No 275
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=39.19 E-value=43 Score=28.22 Aligned_cols=32 Identities=13% Similarity=0.087 Sum_probs=24.7
Q ss_pred HHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHh
Q 022749 154 LISYLINKDNSEGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 154 ~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~ 186 (292)
+++.|.++ +...-.+.|-|+|+.++..|+...
T Consensus 16 vl~aL~e~-gi~~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 16 VAKALRER-GPLIDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 34555443 677889999999999999998864
No 276
>PRK02399 hypothetical protein; Provisional
Probab=38.84 E-value=4e+02 Score=26.40 Aligned_cols=37 Identities=27% Similarity=0.293 Sum_probs=29.5
Q ss_pred HhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEEe
Q 022749 160 NKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQ 199 (292)
Q Consensus 160 ~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL~ 199 (292)
++....-|+-+|-|+|..++...++.. |--+-++++.
T Consensus 92 ~~g~i~gviglGGs~GT~lat~aMr~L---PiG~PKlmVS 128 (406)
T PRK02399 92 ERGDVAGVIGLGGSGGTALATPAMRAL---PIGVPKLMVS 128 (406)
T ss_pred hcCCccEEEEecCcchHHHHHHHHHhC---CCCCCeEEEE
Confidence 344577899999999999999988876 7777777764
No 277
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=38.61 E-value=51 Score=28.87 Aligned_cols=36 Identities=14% Similarity=0.154 Sum_probs=23.4
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEec
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFL 131 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~ 131 (292)
.-|.+++.||+++..... ...+..|.+.++.++..+
T Consensus 48 ~~p~v~~~h~~~~~~~~~---~~~~~~l~~~~~~~~~~~ 83 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQS---LGYAVLLAEKGYRVLAGD 83 (299)
T ss_pred cCceEEeccCccccccCc---chHHHHhhhceeEEeeec
Confidence 457899999998543221 125666777788877543
No 278
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=38.53 E-value=2.1e+02 Score=26.53 Aligned_cols=65 Identities=11% Similarity=0.211 Sum_probs=39.4
Q ss_pred CcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEE-EeChHHHHHHHHHHHhccCccccceEEEe
Q 022749 124 RWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLL-GHSTGCQDIVHYMRANAACSRAVRAAIFQ 199 (292)
Q Consensus 124 Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLv-GHSmGG~ial~ya~~~~~~p~~V~glIL~ 199 (292)
++.++ .+|-+|... .+.+.++++.+.+... ....++|+ .-++++..+...+.++. .-.++++|+-
T Consensus 154 ~~D~V----iIDt~Gr~~----~~~~~l~el~~~~~~~-~~~~~~LVl~a~~~~~d~~~~~~~f~--~~~~~~~I~T 219 (270)
T PRK06731 154 RVDYI----LIDTAGKNY----RASETVEEMIETMGQV-EPDYICLTLSASMKSKDMIEIITNFK--DIHIDGIVFT 219 (270)
T ss_pred CCCEE----EEECCCCCc----CCHHHHHHHHHHHhhh-CCCeEEEEEcCccCHHHHHHHHHHhC--CCCCCEEEEE
Confidence 67777 455566643 2234444444443221 22345555 45788999999888872 4578999974
No 279
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=38.31 E-value=28 Score=32.52 Aligned_cols=23 Identities=17% Similarity=0.105 Sum_probs=18.9
Q ss_pred HhcCCCcEEEEEeChHHHHHHHH
Q 022749 160 NKDNSEGVVLLGHSTGCQDIVHY 182 (292)
Q Consensus 160 ~~~~~~~vvLvGHSmGG~ial~y 182 (292)
+..|..+-+++|||+|=..|+..
T Consensus 79 ~~~Gi~P~~v~GhSlGE~aA~~a 101 (318)
T PF00698_consen 79 RSWGIKPDAVIGHSLGEYAALVA 101 (318)
T ss_dssp HHTTHCESEEEESTTHHHHHHHH
T ss_pred cccccccceeeccchhhHHHHHH
Confidence 44688999999999998877755
No 280
>KOG1420 consensus Ca2+-activated K+ channel Slowpoke, alpha subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=38.29 E-value=21 Score=36.86 Aligned_cols=12 Identities=33% Similarity=0.567 Sum_probs=6.2
Q ss_pred CCCcEEEEEeCh
Q 022749 163 NSEGVVLLGHST 174 (292)
Q Consensus 163 ~~~~vvLvGHSm 174 (292)
|.+.+++.||=+
T Consensus 356 gkkhivvcghit 367 (1103)
T KOG1420|consen 356 GKKHIVVCGHIT 367 (1103)
T ss_pred CCeeEEEeccee
Confidence 444555666633
No 281
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=37.80 E-value=36 Score=30.67 Aligned_cols=22 Identities=23% Similarity=0.462 Sum_probs=18.1
Q ss_pred CCCcEEEEEeChHHHHHHHHHH
Q 022749 163 NSEGVVLLGHSTGCQDIVHYMR 184 (292)
Q Consensus 163 ~~~~vvLvGHSmGG~ial~ya~ 184 (292)
....|+++|||+|....-++-.
T Consensus 233 ~i~~I~i~GhSl~~~D~~Yf~~ 254 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDYPYFEE 254 (270)
T ss_pred CCCEEEEEeCCCchhhHHHHHH
Confidence 5689999999999988776643
No 282
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=37.79 E-value=42 Score=31.61 Aligned_cols=59 Identities=24% Similarity=0.128 Sum_probs=37.3
Q ss_pred HHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHH--HHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHh
Q 022749 113 LEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEI--DQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 113 ~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl--~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~ 186 (292)
+..+++.|......++ . -|=| +.-+ .-+++.|.+ .++..-.++|-|+|+.++..|+..+
T Consensus 4 ~~rl~r~l~~~~~gLv-----L--~GGG-------~RG~ahiGvL~aLee-~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 4 FSRLARVLTGNSIALV-----L--GGGG-------ARGCAHIGVIKALEE-AGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHhcCCCEEEE-----E--CChH-------HHHHHHHHHHHHHHH-cCCCCCEEEEECHHHHHHHHHHcCC
Confidence 5678888886544333 1 2222 1122 124455544 3777778999999999999999763
No 283
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=37.41 E-value=70 Score=30.60 Aligned_cols=67 Identities=16% Similarity=0.268 Sum_probs=39.5
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCC----CCCC--CC----C---CcHHHHHHHHHHHH
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTG----YGTS--SL----Q---QDAMEIDQLISYLI 159 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G----~G~S--~~----~---~~v~Dl~~~i~~l~ 159 (292)
...-.|||-|=- ..+=..+|..|.++||+|++=- .+-.| .|.. .. . ..-+.|+++.++++
T Consensus 27 ~~~k~VlITGCD-----SGfG~~LA~~L~~~Gf~V~Agc--l~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~ 99 (322)
T KOG1610|consen 27 LSDKAVLITGCD-----SGFGRLLAKKLDKKGFRVFAGC--LTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVK 99 (322)
T ss_pred cCCcEEEEecCC-----cHHHHHHHHHHHhcCCEEEEEe--ecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHH
Confidence 345577787732 2233578999999999999532 12122 1222 11 1 12467888888887
Q ss_pred HhcCCCc
Q 022749 160 NKDNSEG 166 (292)
Q Consensus 160 ~~~~~~~ 166 (292)
+..+.+.
T Consensus 100 ~~l~~~g 106 (322)
T KOG1610|consen 100 KHLGEDG 106 (322)
T ss_pred Hhccccc
Confidence 7655554
No 284
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=36.61 E-value=1.1e+02 Score=26.49 Aligned_cols=38 Identities=8% Similarity=0.063 Sum_probs=28.2
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEe
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQF 130 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~ 130 (292)
.+.+|+++.-+...+...+..+...+.|.+.|+.|+.+
T Consensus 111 ~~~pv~i~PaMn~~M~~~p~~~~nl~~L~~~G~~vi~P 148 (177)
T TIGR02113 111 PETPKLIAPAMNTKMYQNPITQRNIKILKKIGYQEIQP 148 (177)
T ss_pred CCCCEEEEeCCCHHHhCCHHHHHHHHHHHHCCCEEECC
Confidence 35688888877755555556667788899999999844
No 285
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=36.24 E-value=53 Score=27.93 Aligned_cols=33 Identities=12% Similarity=0.002 Sum_probs=24.6
Q ss_pred HHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHh
Q 022749 153 QLISYLINKDNSEGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 153 ~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~ 186 (292)
.+++.|.+ .+...=++.|-|+|+.++..++..+
T Consensus 16 Gvl~~L~e-~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 16 GALKALEE-AGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHH-cCCCcceEEEECHHHHHHHHHHcCC
Confidence 34455544 3566678999999999999998754
No 286
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=35.66 E-value=2.1e+02 Score=26.81 Aligned_cols=59 Identities=12% Similarity=0.082 Sum_probs=30.0
Q ss_pred hHHHHHHHHhhCCc---EEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEEeChHHHHH
Q 022749 112 YLEPLAIALDKERW---SLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDI 179 (292)
Q Consensus 112 ~~~~la~~L~~~Gy---~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ia 179 (292)
++....+.+.+.|+ +++ .| ||+|...-...-.++-.-++.++ .....+|+|+|-=..+.
T Consensus 164 ~l~~~i~~a~~~GI~~~~Ii-----lD-PGiGF~k~~~~n~~ll~~l~~l~---~lg~Pilvg~SRKsfig 225 (282)
T PRK11613 164 YFIEQIARCEAAGIAKEKLL-----LD-PGFGFGKNLSHNYQLLARLAEFH---HFNLPLLVGMSRKSMIG 225 (282)
T ss_pred HHHHHHHHHHHcCCChhhEE-----Ee-CCCCcCCCHHHHHHHHHHHHHHH---hCCCCEEEEecccHHHH
Confidence 44555566667787 443 34 46664321111112222233333 24567899999665554
No 287
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=35.45 E-value=85 Score=27.56 Aligned_cols=62 Identities=11% Similarity=-0.003 Sum_probs=36.9
Q ss_pred HHHHHhhCCc-EEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEEeCh----HHHHHHHHHHHh
Q 022749 116 LAIALDKERW-SLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHST----GCQDIVHYMRAN 186 (292)
Q Consensus 116 la~~L~~~Gy-~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGHSm----GG~ial~ya~~~ 186 (292)
.++.+...|. +|+ ..+.++.... +.+.+..++..+.++.+ ..++|+|||. |..++-..|.+.
T Consensus 68 ~~~~l~~~G~d~V~----~~~~~~~~~~----~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarL 134 (202)
T cd01714 68 ALREALAMGADRAI----LVSDRAFAGA----DTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELL 134 (202)
T ss_pred HHHHHHHcCCCEEE----EEecccccCC----ChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHh
Confidence 3444444565 576 3344444332 23444444444433334 5799999999 888888888875
No 288
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=34.85 E-value=51 Score=30.54 Aligned_cols=32 Identities=19% Similarity=0.061 Sum_probs=24.4
Q ss_pred HHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHh
Q 022749 154 LISYLINKDNSEGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 154 ~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~ 186 (292)
+++.|.+ .++..=.+.|-|+|+.++..||..+
T Consensus 28 VL~aLeE-~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEE-AGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHH-cCCCccEEEEECHHHHHHHHHHcCC
Confidence 3455533 4777778999999999999999763
No 289
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=34.45 E-value=1.1e+02 Score=23.24 Aligned_cols=39 Identities=23% Similarity=0.354 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHh---cCCCcEEEEEeChHHHHHHHHHHHh
Q 022749 148 AMEIDQLISYLINK---DNSEGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 148 v~Dl~~~i~~l~~~---~~~~~vvLvGHSmGG~ial~ya~~~ 186 (292)
.+++++.+++++++ .+.++|.++|-|.|=.+|.+.+..+
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 46788888888753 3557899999999999998877765
No 290
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=33.47 E-value=52 Score=30.69 Aligned_cols=25 Identities=20% Similarity=0.122 Sum_probs=21.8
Q ss_pred cCCCcEEEEEeChHHHHHHHHHHHh
Q 022749 162 DNSEGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 162 ~~~~~vvLvGHSmGG~ial~ya~~~ 186 (292)
.++..-++.|-|||+.++..||..+
T Consensus 36 ~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 36 AGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred cCCCccEEEecCHHHHHHHHHHcCC
Confidence 3678889999999999999999854
No 291
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=32.92 E-value=1e+02 Score=26.60 Aligned_cols=52 Identities=17% Similarity=0.163 Sum_probs=36.1
Q ss_pred HhhCCcEEEEecccccCCCCCCCC-CCCcHHHHHHHHHHHHHhcCCCcEEEEEeChH
Q 022749 120 LDKERWSLVQFLMTSSYTGYGTSS-LQQDAMEIDQLISYLINKDNSEGVVLLGHSTG 175 (292)
Q Consensus 120 L~~~Gy~Vi~~~l~~D~~G~G~S~-~~~~v~Dl~~~i~~l~~~~~~~~vvLvGHSmG 175 (292)
|.+.|++.+.+|+ -..=... ......++.++++.+++..+.++|.|+-.|.|
T Consensus 36 Lk~~Gik~li~Dk----DNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDK----DNTLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcC----CCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 7788999996654 3321111 12234678888888887767678999999986
No 292
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=32.13 E-value=55 Score=33.51 Aligned_cols=25 Identities=16% Similarity=0.082 Sum_probs=20.3
Q ss_pred HhcCCCcEEEEEeChHHHHHHHHHH
Q 022749 160 NKDNSEGVVLLGHSTGCQDIVHYMR 184 (292)
Q Consensus 160 ~~~~~~~vvLvGHSmGG~ial~ya~ 184 (292)
+..++++-.++|||+|=..|+..|-
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAG 284 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLG 284 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhC
Confidence 4578999999999999877776553
No 293
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=31.32 E-value=76 Score=28.26 Aligned_cols=31 Identities=16% Similarity=0.114 Sum_probs=23.0
Q ss_pred HHHHHHhcCCCcEEEEEeChHHHHHHHHHHHh
Q 022749 155 ISYLINKDNSEGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 155 i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~ 186 (292)
++.|.+ .+.+.-.+.|-|+|+.++..|+..+
T Consensus 19 L~aL~e-~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 19 LAALLE-MGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHH-cCCCceEEEEeCHHHHHHHHHHcCC
Confidence 344433 2566678999999999999998753
No 294
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=30.86 E-value=69 Score=30.20 Aligned_cols=19 Identities=21% Similarity=0.240 Sum_probs=16.6
Q ss_pred EEEEeChHHHHHHHHHHHh
Q 022749 168 VLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 168 vLvGHSmGG~ial~ya~~~ 186 (292)
++.|.|+||.||+.++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6789999999999998754
No 295
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=30.69 E-value=58 Score=27.83 Aligned_cols=36 Identities=11% Similarity=0.217 Sum_probs=21.9
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEe
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQF 130 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~ 130 (292)
..||++|--.....+...+..+++.|.++||+++.+
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl 187 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTI 187 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEH
Confidence 357778831111123455667888888888888743
No 296
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=30.17 E-value=72 Score=30.74 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=40.9
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEE
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLG 171 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvG 171 (292)
+.+|.|+++=|..+ .+-......+|..|.++|++|+ .+-|.+=+...+++++.+.+.+ + +-++.
T Consensus 136 ~~~p~Vil~vGVNG-~GKTTTIaKLA~~l~~~g~~Vl--------laA~DTFRAaAiEQL~~w~er~----g---v~vI~ 199 (340)
T COG0552 136 EKKPFVILFVGVNG-VGKTTTIAKLAKYLKQQGKSVL--------LAAGDTFRAAAIEQLEVWGERL----G---VPVIS 199 (340)
T ss_pred CCCcEEEEEEecCC-CchHhHHHHHHHHHHHCCCeEE--------EEecchHHHHHHHHHHHHHHHh----C---CeEEc
Confidence 34577777666552 1223346689999999999998 3344332333345555554443 3 45666
Q ss_pred eChHHH
Q 022749 172 HSTGCQ 177 (292)
Q Consensus 172 HSmGG~ 177 (292)
|..|+=
T Consensus 200 ~~~G~D 205 (340)
T COG0552 200 GKEGAD 205 (340)
T ss_pred cCCCCC
Confidence 666653
No 297
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=30.04 E-value=70 Score=28.17 Aligned_cols=32 Identities=16% Similarity=0.179 Sum_probs=24.2
Q ss_pred HHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHh
Q 022749 154 LISYLINKDNSEGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 154 ~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~ 186 (292)
+++.|.++ +...-.+.|.|+|+.++..|+...
T Consensus 16 vl~aL~e~-g~~~d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 16 VLKALAEA-GIEPDIISGTSIGAINGALIAGGD 47 (215)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 34455443 566668999999999999999865
No 298
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=29.74 E-value=2.1e+02 Score=23.45 Aligned_cols=74 Identities=18% Similarity=0.127 Sum_probs=34.9
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccc-cCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEE
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTS-SYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLG 171 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~-D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvG 171 (292)
..-++..|.++. ........+-..+.....+++.+.+.. |. ..+. +.....++++.+++.++++.+..++++++
T Consensus 23 ~~~v~n~g~~G~-t~~~~~~~~~~~~~~~~pd~v~i~~G~ND~-~~~~-~~~~~~~~~~~l~~~~~~~~p~~~vi~~~ 97 (174)
T cd01841 23 GKTVNNLGIAGI-SSRQYLEHIEPQLIQKNPSKVFLFLGTNDI-GKEV-SSNQFIKWYRDIIEQIREEFPNTKIYLLS 97 (174)
T ss_pred CCeEEecccccc-cHHHHHHHHHHHHHhcCCCEEEEEeccccC-CCCC-CHHHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 344566676632 222333334233444455555443311 21 1111 22233566777777776654555666665
No 299
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=29.55 E-value=76 Score=29.08 Aligned_cols=38 Identities=26% Similarity=0.156 Sum_probs=29.5
Q ss_pred eEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEeccc
Q 022749 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMT 133 (292)
Q Consensus 96 ~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~ 133 (292)
.+|.|-|.-+|.+....-..++..|++.|.+|+++|+.
T Consensus 2 ~~iai~s~kGGvG~TTltAnLA~aL~~~G~~VlaID~d 39 (243)
T PF06564_consen 2 KVIAIVSPKGGVGKTTLTANLAWALARLGESVLAIDLD 39 (243)
T ss_pred cEEEEecCCCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 36677777666666666678999999999999988874
No 300
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=29.52 E-value=3.7e+02 Score=25.78 Aligned_cols=95 Identities=15% Similarity=0.193 Sum_probs=51.8
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhh-CCcEEEEecccccCCCCCCCCC------CC-cHHHHHHHHHHHHHhcCCC
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGYGTSSL------QQ-DAMEIDQLISYLINKDNSE 165 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~-~Gy~Vi~~~l~~D~~G~G~S~~------~~-~v~Dl~~~i~~l~~~~~~~ 165 (292)
..-||+.||.. .+...| |..+-++ +.|+|+..+.+....||-.+.. +. .+.|..-+ .+.. ...
T Consensus 162 snEviLT~g~S---rTV~~F--L~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~daaVf--A~Ms--rVn 232 (353)
T KOG1465|consen 162 SNEVILTLGSS---RTVENF--LKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIPDAAVF--AMMS--RVN 232 (353)
T ss_pred cCceEEecCcc---HHHHHH--HHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEeccHHHH--HHhh--hcc
Confidence 45689999944 222222 2233333 5799988877777777755421 10 12222211 1122 245
Q ss_pred cEEEEEeCh----------HHHHHHHHHHHhccCccccceEEEeCCCC
Q 022749 166 GVVLLGHST----------GCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (292)
Q Consensus 166 ~vvLvGHSm----------GG~ial~ya~~~~~~p~~V~glIL~aP~~ 203 (292)
+|+|.-|.. |+..+...|.+| ---+|.++|..
T Consensus 233 KVIigt~avl~NGgl~~~~G~~~vAlaAk~h------~vPv~VlAp~y 274 (353)
T KOG1465|consen 233 KVIIGTHAVLANGGLRAPSGVHTVALAAKHH------SVPVIVLAPMY 274 (353)
T ss_pred eEEEEeeeEecCCCeeccchHHHHHHHHHhc------CCcEEEecchh
Confidence 788887763 677776666665 22356677754
No 301
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=29.42 E-value=1.3e+02 Score=27.38 Aligned_cols=39 Identities=15% Similarity=0.055 Sum_probs=25.6
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecc
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l 132 (292)
++.|+||.=-....-...|...+-+.|.+.|+.|..++.
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~ 69 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHR 69 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEecc
Confidence 567888876542211234566677888889999886554
No 302
>PLN02834 3-dehydroquinate synthase
Probab=29.40 E-value=5.7e+02 Score=25.33 Aligned_cols=45 Identities=18% Similarity=0.177 Sum_probs=27.0
Q ss_pred hHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHh
Q 022749 112 YLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINK 161 (292)
Q Consensus 112 ~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~ 161 (292)
|.+.+.+.|.+.|+.+..++.. ++ -|.. ....+.+..+++.+++.
T Consensus 115 ~~~~v~~~L~~~g~~~~v~~~v--~~-~gE~--~ksl~~v~~~~~~l~~~ 159 (433)
T PLN02834 115 YLEKVVEALTAKGPELTVESVI--LP-DGEK--YKDMETLMKVFDKALES 159 (433)
T ss_pred HHHHHHHHHHhcCCceEEEEEE--ec-CCcC--CCCHHHHHHHHHHHHhc
Confidence 6677888898888754421111 12 1222 34578888888887653
No 303
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=28.54 E-value=2.8e+02 Score=27.81 Aligned_cols=72 Identities=15% Similarity=0.135 Sum_probs=43.7
Q ss_pred HHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEE
Q 022749 118 IALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAI 197 (292)
Q Consensus 118 ~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glI 197 (292)
+.+.+.+|.|+.+|. - |+-..+ +++-+=+..+++......+.+|=-+|=|+.|...|..+. ..-.|.|+|
T Consensus 176 ~~ak~~~~DvvIvDT----A--GRl~id---e~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~-e~l~itGvI 245 (451)
T COG0541 176 EKAKEEGYDVVIVDT----A--GRLHID---EELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFN-EALGITGVI 245 (451)
T ss_pred HHHHHcCCCEEEEeC----C--Cccccc---HHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHh-hhcCCceEE
Confidence 344455677775544 2 222221 222222233333346788999999999999999998872 123578998
Q ss_pred Ee
Q 022749 198 FQ 199 (292)
Q Consensus 198 L~ 199 (292)
|.
T Consensus 246 lT 247 (451)
T COG0541 246 LT 247 (451)
T ss_pred EE
Confidence 75
No 304
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=28.41 E-value=95 Score=26.03 Aligned_cols=32 Identities=16% Similarity=0.092 Sum_probs=23.3
Q ss_pred HHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHh
Q 022749 154 LISYLINKDNSEGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 154 ~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~ 186 (292)
+++.|.+ .+...=++.|-|.|+.++..++...
T Consensus 18 vl~~L~~-~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 18 VLKALEE-AGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHH-cCCCeeEEEEECHHHHHHHHHHcCC
Confidence 3445443 2555668999999999999998653
No 305
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=28.04 E-value=5.6e+02 Score=24.78 Aligned_cols=94 Identities=14% Similarity=0.088 Sum_probs=51.1
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCc-EEEEec-ccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEE
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERW-SLVQFL-MTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVL 169 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy-~Vi~~~-l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvL 169 (292)
..+.+|++--|+. .+.+-|..-++.+.+.|- .++..+ ....|+-.+... + |+..+. .+++..+ -+|++
T Consensus 223 ~~gkPVilk~G~~---~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~----l-dl~~i~-~lk~~~~-~PV~~ 292 (360)
T PRK12595 223 RVNKPVLLKRGLS---ATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNT----L-DISAVP-ILKQETH-LPVMV 292 (360)
T ss_pred ccCCcEEEeCCCC---CCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCC----c-CHHHHH-HHHHHhC-CCEEE
Confidence 3477999999986 456667777788877675 354222 111222122211 1 555443 3444444 46777
Q ss_pred -EEeChH---HHHHHHHHHHhccCccccceEEEe
Q 022749 170 -LGHSTG---CQDIVHYMRANAACSRAVRAAIFQ 199 (292)
Q Consensus 170 -vGHSmG---G~ial~ya~~~~~~p~~V~glIL~ 199 (292)
-.||.| -...+..|+.. --.+|+|+-
T Consensus 293 d~~Hs~G~r~~~~~~a~aAva----~GAdg~~iE 322 (360)
T PRK12595 293 DVTHSTGRRDLLLPTAKAALA----IGADGVMAE 322 (360)
T ss_pred eCCCCCcchhhHHHHHHHHHH----cCCCeEEEE
Confidence 799988 43223333321 236667764
No 306
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=27.42 E-value=4.2e+02 Score=23.23 Aligned_cols=60 Identities=13% Similarity=0.068 Sum_probs=32.2
Q ss_pred HHHHHHHhhCCcEEEEecccccCCCCCCCC-C---CCcHHHHHHHHHHHHHhcCCCcEEEEEeChH
Q 022749 114 EPLAIALDKERWSLVQFLMTSSYTGYGTSS-L---QQDAMEIDQLISYLINKDNSEGVVLLGHSTG 175 (292)
Q Consensus 114 ~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~-~---~~~v~Dl~~~i~~l~~~~~~~~vvLvGHSmG 175 (292)
..+++.|.++|++|+..+...+........ . -.+.++++++++.+.++.+ ++.++=|.-|
T Consensus 23 ~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~li~~Ag 86 (266)
T PRK06171 23 LAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFG--RIDGLVNNAG 86 (266)
T ss_pred HHHHHHHHHCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHcC--CCCEEEECCc
Confidence 467888988999998554321111111100 1 1234677888887766543 3444444444
No 307
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=27.12 E-value=1.1e+02 Score=27.80 Aligned_cols=35 Identities=17% Similarity=0.135 Sum_probs=24.2
Q ss_pred eEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecc
Q 022749 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (292)
Q Consensus 96 ~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l 132 (292)
+|.|+ |-| |-+....--.+|..|+++|++|+.+|+
T Consensus 3 ~i~~~-gKG-GVGKTT~a~nLA~~La~~G~rVLliD~ 37 (279)
T PRK13230 3 KFCFY-GKG-GIGKSTTVCNIAAALAESGKKVLVVGC 37 (279)
T ss_pred EEEEE-CCC-CCcHHHHHHHHHHHHHhCCCEEEEEee
Confidence 56666 655 323333344689999999999997776
No 308
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=27.06 E-value=1.5e+02 Score=29.07 Aligned_cols=74 Identities=9% Similarity=0.098 Sum_probs=47.8
Q ss_pred CCceEEEECCCCCCCC--ChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEE
Q 022749 93 YQQQVIFIGGLTDGFF--ATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLL 170 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~--s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLv 170 (292)
.+.+|||-|--.-+.. ...--+.+.+.|+++| -|+.+++-.++..++. ...+.|+.+.++++++-.|.+.|-|-
T Consensus 265 S~APVIFSHSsA~~vcns~rNVPDdVL~llk~Ng-GvVMVnfy~~~isc~~---~A~v~~v~~Hi~hIr~VaG~~hIGlG 340 (419)
T KOG4127|consen 265 SRAPVIFSHSSAYSVCNSSRNVPDDVLQLLKENG-GVVMVNFYPGFISCSD---RATVSDVADHINHIRAVAGIDHIGLG 340 (419)
T ss_pred hcCceEeecccHHHHhcCccCCcHHHHHHHhhcC-CEEEEEeecccccCCC---cccHHHHHHHHHHHHHhhccceeecc
Confidence 4789999997542221 1122346778888887 6776776544444443 33488999999999876676655443
No 309
>PRK10115 protease 2; Provisional
Probab=27.01 E-value=1.1e+02 Score=32.13 Aligned_cols=69 Identities=13% Similarity=0.075 Sum_probs=37.3
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEeccccc-CCCCCCC-CCCCcHHHHHHHHHHHHHh
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSS-YTGYGTS-SLQQDAMEIDQLISYLINK 161 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D-~~G~G~S-~~~~~v~Dl~~~i~~l~~~ 161 (292)
.-|+++++||..|.......-..++..|.++|..+--+.+..+ --|||.. ......+++.....++...
T Consensus 605 ~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~ 675 (686)
T PRK10115 605 AYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIAL 675 (686)
T ss_pred CCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 4577889999987443222223577888877754211111222 3588743 2333345555555666543
No 310
>PF14359 DUF4406: Domain of unknown function (DUF4406)
Probab=26.97 E-value=2.9e+02 Score=21.18 Aligned_cols=69 Identities=12% Similarity=0.071 Sum_probs=42.8
Q ss_pred ChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEE---eChHHHHHHHHHHH
Q 022749 109 ATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLG---HSTGCQDIVHYMRA 185 (292)
Q Consensus 109 s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvG---HSmGG~ial~ya~~ 185 (292)
+...+...++.|.++||.|+.+-. . +...-....+-++.-+..|. ..+.|++++ +|-|+.+=..+|.+
T Consensus 14 N~~~f~~~a~~L~~~G~~vvnPa~----~--~~~~~~~~~~ym~~~l~~L~---~cD~i~~l~gWe~S~GA~~E~~~A~~ 84 (92)
T PF14359_consen 14 NRPAFNAAAKRLRAKGYEVVNPAE----L--GIPEGLSWEEYMRICLAMLS---DCDAIYMLPGWENSRGARLEHELAKK 84 (92)
T ss_pred HHHHHHHHHHHHHHCCCEEeCchh----h--CCCCCCCHHHHHHHHHHHHH---hCCEEEEcCCcccCcchHHHHHHHHH
Confidence 345567788999999999994422 2 11111112233444455554 245677763 79999999988887
Q ss_pred h
Q 022749 186 N 186 (292)
Q Consensus 186 ~ 186 (292)
.
T Consensus 85 l 85 (92)
T PF14359_consen 85 L 85 (92)
T ss_pred C
Confidence 5
No 311
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=26.96 E-value=86 Score=25.83 Aligned_cols=34 Identities=9% Similarity=0.074 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHH
Q 022749 148 AMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVH 181 (292)
Q Consensus 148 v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ 181 (292)
..+...-+++....++.+.|+++||+==|.+-..
T Consensus 38 ~~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~ 71 (153)
T PF00484_consen 38 DDSALASLEYAVYHLGVKEIIVCGHTDCGAIKAA 71 (153)
T ss_dssp -HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHH
T ss_pred ccchhhheeeeeecCCCCEEEEEcCCCchHHHHH
Confidence 3566667777777789999999999976665533
No 312
>PRK04435 hypothetical protein; Provisional
Probab=26.77 E-value=2.2e+02 Score=23.73 Aligned_cols=61 Identities=20% Similarity=0.264 Sum_probs=40.0
Q ss_pred hHHHHHHHHhhCCcEEEEecccccCCCCCCCCC---CCcH-HHHHHHHHHHHHhcCCCcEEEEEe
Q 022749 112 YLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL---QQDA-MEIDQLISYLINKDNSEGVVLLGH 172 (292)
Q Consensus 112 ~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~---~~~v-~Dl~~~i~~l~~~~~~~~vvLvGH 172 (292)
.+..+...|++.|..+..++......|...-.. ..+. .++.++++.|++-.+..++-|+|.
T Consensus 82 lLs~Il~~IA~~~aNIltI~q~i~~~g~a~vs~tVevs~~~~~L~~Li~~L~~i~gV~~V~i~~~ 146 (147)
T PRK04435 82 TLSKVLNVIAEAGGNILTINQSIPLQGRANVTISIDTSSMEGDIDELLEKLRNLDGVEKVELIGM 146 (147)
T ss_pred HHHHHHHHHHHcCCCeEEEEEEcCCCCEEEEEEEEEeCChHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 366788999999999986654222222211111 1233 488999999887668888988885
No 313
>COG0218 Predicted GTPase [General function prediction only]
Probab=26.58 E-value=62 Score=28.87 Aligned_cols=37 Identities=35% Similarity=0.631 Sum_probs=18.5
Q ss_pred ccCCCCCCCCCCCcH-HHHHHHH-HHHHHhcCCCcEEEE
Q 022749 134 SSYTGYGTSSLQQDA-MEIDQLI-SYLINKDNSEGVVLL 170 (292)
Q Consensus 134 ~D~~G~G~S~~~~~v-~Dl~~~i-~~l~~~~~~~~vvLv 170 (292)
.|+||||....+... +.+..++ +||..+.....++++
T Consensus 75 VDlPGYGyAkv~k~~~e~w~~~i~~YL~~R~~L~~vvll 113 (200)
T COG0218 75 VDLPGYGYAKVPKEVKEKWKKLIEEYLEKRANLKGVVLL 113 (200)
T ss_pred EeCCCcccccCCHHHHHHHHHHHHHHHhhchhheEEEEE
Confidence 477888877655433 3344443 344333334444444
No 314
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=26.58 E-value=5e+02 Score=23.93 Aligned_cols=90 Identities=14% Similarity=0.221 Sum_probs=50.4
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCc-EEEEecccccCCCCCCCCCCCc---HHHHHHHHHHHHHhcCCCcE
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERW-SLVQFLMTSSYTGYGTSSLQQD---AMEIDQLISYLINKDNSEGV 167 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy-~Vi~~~l~~D~~G~G~S~~~~~---v~Dl~~~i~~l~~~~~~~~v 167 (292)
..+.+|++=-|.. .+.+-|...++.+.+.|- .|+. -+||. +..+.. .-|+..+ ..+++..+ -+|
T Consensus 120 ~tgkPVilk~G~~---~t~~e~~~A~e~i~~~Gn~~i~L-----~eRg~--~~Y~~~~~n~~dl~ai-~~lk~~~~-lPV 187 (250)
T PRK13397 120 HIDKPILFKRGLM---ATIEEYLGALSYLQDTGKSNIIL-----CERGV--RGYDVETRNMLDIMAV-PIIQQKTD-LPI 187 (250)
T ss_pred ccCCeEEEeCCCC---CCHHHHHHHHHHHHHcCCCeEEE-----Ecccc--CCCCCccccccCHHHH-HHHHHHhC-CCe
Confidence 3477999999966 556667778888887775 3542 22332 222222 3355443 33444333 466
Q ss_pred EE-EEeChHH-----HHHHHHHHHhccCccccceEEEe
Q 022749 168 VL-LGHSTGC-----QDIVHYMRANAACSRAVRAAIFQ 199 (292)
Q Consensus 168 vL-vGHSmGG-----~ial~ya~~~~~~p~~V~glIL~ 199 (292)
++ ..||.|- .++.. |.. --.+|+++-
T Consensus 188 ivd~SHs~G~r~~v~~~a~A-AvA-----~GAdGl~IE 219 (250)
T PRK13397 188 IVDVSHSTGRRDLLLPAAKI-AKA-----VGANGIMME 219 (250)
T ss_pred EECCCCCCcccchHHHHHHH-HHH-----hCCCEEEEE
Confidence 55 5799774 33332 222 247788764
No 315
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=26.57 E-value=83 Score=29.05 Aligned_cols=33 Identities=12% Similarity=0.222 Sum_probs=23.4
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEe
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQF 130 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~ 130 (292)
..||++|-.. .+...+..+++.|.++||+++.+
T Consensus 231 G~IILmHd~~---~T~~aL~~iI~~Lk~kGy~fvtl 263 (268)
T TIGR02873 231 GAMVLMHPTA---SSTEGLEEMITIIKEKGYKIGTI 263 (268)
T ss_pred CcEEEEcCCc---cHHHHHHHHHHHHHHCCCEEEeH
Confidence 4577888543 34566777888888888888844
No 316
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=26.39 E-value=56 Score=32.31 Aligned_cols=32 Identities=16% Similarity=0.147 Sum_probs=24.5
Q ss_pred HHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHh
Q 022749 154 LISYLINKDNSEGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 154 ~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~ 186 (292)
+++.|.++ +..+=++.|-|+|+.+|..|+...
T Consensus 91 VLkaL~E~-gl~p~vIsGTSaGAivAal~as~~ 122 (421)
T cd07230 91 VLKALFEA-NLLPRIISGSSAGSIVAAILCTHT 122 (421)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 44555443 666778999999999999998754
No 317
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=26.20 E-value=1.4e+02 Score=25.15 Aligned_cols=37 Identities=22% Similarity=0.159 Sum_probs=23.3
Q ss_pred CCceEEEECCCCCCC----------CChhhHH-----------HHHHHHhhCCcEEEE
Q 022749 93 YQQQVIFIGGLTDGF----------FATEYLE-----------PLAIALDKERWSLVQ 129 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~----------~s~~~~~-----------~la~~L~~~Gy~Vi~ 129 (292)
+..+|||+||-.-+- .+..||. ..+..|++.||+|+.
T Consensus 56 ~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~Gwrvlv 113 (150)
T COG3727 56 KYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLV 113 (150)
T ss_pred CceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEE
Confidence 457899999933111 1234552 245678889999974
No 318
>COG0698 RpiB Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]
Probab=25.71 E-value=3.3e+02 Score=23.20 Aligned_cols=59 Identities=14% Similarity=0.267 Sum_probs=32.3
Q ss_pred HHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHH-HHHHHHHhcCCCcEEEEEeChHHHHH
Q 022749 114 EPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQ-LISYLINKDNSEGVVLLGHSTGCQDI 179 (292)
Q Consensus 114 ~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~-~i~~l~~~~~~~~vvLvGHSmGG~ia 179 (292)
..+.++|.+.||.|+ |+..+.. ..+.+.-|+.. +.+.+.+.....-|.+.|.-.|-.++
T Consensus 16 ~~I~~~Lk~~g~~v~------D~G~~~~-~~~~dyp~~a~~va~~v~~~~~d~GIliCGTGiG~~ia 75 (151)
T COG0698 16 EIIIDHLKSKGYEVI------DFGTYTD-EGSVDYPDYAKKVAEAVLNGEADLGILICGTGIGMSIA 75 (151)
T ss_pred HHHHHHHHHCCCEEE------eccccCC-CCCcchHHHHHHHHHHHHcCCCCeeEEEecCChhHHHH
Confidence 457889999999998 4333322 12234445543 33444432122235556766666655
No 319
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=25.66 E-value=1.3e+02 Score=22.12 Aligned_cols=39 Identities=13% Similarity=0.382 Sum_probs=23.2
Q ss_pred CceEEEECCCC-CCCCChhhHHHHHHHHh-hCCcEEEEecccccCCCCC
Q 022749 94 QQQVIFIGGLT-DGFFATEYLEPLAIALD-KERWSLVQFLMTSSYTGYG 140 (292)
Q Consensus 94 ~~~VV~vHG~~-~g~~s~~~~~~la~~L~-~~Gy~Vi~~~l~~D~~G~G 140 (292)
.+.+++|||-. .| -+.+|+..+ ++|+.++.+ ..|..-||
T Consensus 31 ~~~~~lvhGga~~G------aD~iA~~wA~~~gv~~~~~--~adW~~hG 71 (71)
T PF10686_consen 31 HPDMVLVHGGAPKG------ADRIAARWARERGVPVIRF--PADWQRHG 71 (71)
T ss_pred CCCEEEEECCCCCC------HHHHHHHHHHHCCCeeEEe--CcChhhCC
Confidence 36788999866 33 234555554 457777644 45655554
No 320
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=25.41 E-value=1.1e+02 Score=29.05 Aligned_cols=44 Identities=25% Similarity=0.315 Sum_probs=32.4
Q ss_pred CceEEEECCCC-CCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCC
Q 022749 94 QQQVIFIGGLT-DGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS 142 (292)
Q Consensus 94 ~~~VV~vHG~~-~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S 142 (292)
.-+||.|..++ +|.+..+....+++.|.++|+++..+ -||||..
T Consensus 27 ~vPVIsVGNitvGGTGKTP~v~~La~~l~~~G~~~~Il-----SRGYg~~ 71 (311)
T TIGR00682 27 PVPVVIVGNLSVGGTGKTPVVVWLAELLKDRGLRVGVL-----SRGYGSK 71 (311)
T ss_pred CCCEEEEeccccCCcChHHHHHHHHHHHHHCCCEEEEE-----CCCCCCC
Confidence 45678888775 44456777778999999999998643 2688864
No 321
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=25.17 E-value=98 Score=25.20 Aligned_cols=14 Identities=14% Similarity=0.489 Sum_probs=10.8
Q ss_pred HHHHHhhCCcEEEE
Q 022749 116 LAIALDKERWSLVQ 129 (292)
Q Consensus 116 la~~L~~~Gy~Vi~ 129 (292)
..+.|.+.||+|+.
T Consensus 99 ~~~~L~~~Gw~Vlr 112 (117)
T TIGR00632 99 VNSRLQELGWRVLR 112 (117)
T ss_pred HHHHHHHCcCEEEE
Confidence 44578889999983
No 322
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=25.11 E-value=2.7e+02 Score=25.62 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=20.9
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEe
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQF 130 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~ 130 (292)
.+.+|+|-|-.+|- .. ..++..|.++||.|++-
T Consensus 6 ~~k~VlItgcs~GG--IG--~ala~ef~~~G~~V~At 38 (289)
T KOG1209|consen 6 QPKKVLITGCSSGG--IG--YALAKEFARNGYLVYAT 38 (289)
T ss_pred CCCeEEEeecCCcc--hh--HHHHHHHHhCCeEEEEE
Confidence 34555555544321 11 36899999999999943
No 323
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=24.84 E-value=3.2e+02 Score=23.11 Aligned_cols=76 Identities=12% Similarity=0.197 Sum_probs=39.9
Q ss_pred hHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHH-HHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCc
Q 022749 112 YLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLI-SYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACS 190 (292)
Q Consensus 112 ~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i-~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p 190 (292)
.-+.+.++|.+.||.|+ |+--+.. +.+.+.-|+...+ +.+.+.....-|.+-|.-+|-.++ |.++
T Consensus 14 lK~~l~~~L~~~g~eV~------D~G~~~~-~~~~dYpd~a~~va~~V~~g~~~~GIliCGtGiG~sia---ANK~---- 79 (148)
T PRK05571 14 LKEEIIEHLEELGHEVI------DLGPDSY-DASVDYPDYAKKVAEAVVAGEADRGILICGTGIGMSIA---ANKV---- 79 (148)
T ss_pred HHHHHHHHHHHCCCEEE------EcCCCCC-CCCCCHHHHHHHHHHHHHcCCCCEEEEEcCCcHHHHHH---HhcC----
Confidence 34568899999999998 3221211 1123455554444 344332222345666777776665 3444
Q ss_pred cccceEEEeCC
Q 022749 191 RAVRAAIFQAP 201 (292)
Q Consensus 191 ~~V~glIL~aP 201 (292)
.-|.+.+...+
T Consensus 80 ~GIRAA~~~d~ 90 (148)
T PRK05571 80 KGIRAALCHDT 90 (148)
T ss_pred CCeEEEEECCH
Confidence 33555554443
No 324
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed
Probab=24.79 E-value=5.5e+02 Score=23.60 Aligned_cols=99 Identities=13% Similarity=0.113 Sum_probs=57.7
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCC-cEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEEe
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKER-WSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGH 172 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~G-y~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGH 172 (292)
.|.++=|-|.. ...|...++.+++.| ++.+.+++..-+..+|......+.+-+.++++.+++.. +..+.+=-
T Consensus 92 ~p~i~si~g~~-----~~~~~~~a~~~~~aG~~D~iElN~~cP~~~~gg~~~~~~~~~~~eiv~~vr~~~--~~pv~vKl 164 (301)
T PRK07259 92 TPIIANVAGST-----EEEYAEVAEKLSKAPNVDAIELNISCPNVKHGGMAFGTDPELAYEVVKAVKEVV--KVPVIVKL 164 (301)
T ss_pred CcEEEEeccCC-----HHHHHHHHHHHhccCCcCEEEEECCCCCCCCCccccccCHHHHHHHHHHHHHhc--CCCEEEEc
Confidence 46666676643 445677889998888 99998887554444443334455677788888887653 22333333
Q ss_pred ChHHHHHHHHHHHhccCccccceEEEeCC
Q 022749 173 STGCQDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 173 SmGG~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
+..--....++... ....+++++++..
T Consensus 165 ~~~~~~~~~~a~~l--~~~G~d~i~~~nt 191 (301)
T PRK07259 165 TPNVTDIVEIAKAA--EEAGADGLSLINT 191 (301)
T ss_pred CCCchhHHHHHHHH--HHcCCCEEEEEcc
Confidence 32222233333321 0235888887653
No 325
>COG1591 Holliday junction resolvase - archaeal type [DNA replication, recombination, and repair]
Probab=24.79 E-value=4e+02 Score=22.38 Aligned_cols=18 Identities=17% Similarity=0.239 Sum_probs=15.5
Q ss_pred hhHHHHHHHHhhCCcEEE
Q 022749 111 EYLEPLAIALDKERWSLV 128 (292)
Q Consensus 111 ~~~~~la~~L~~~Gy~Vi 128 (292)
.+-+.|+..|.+.||+|+
T Consensus 8 ~~EReLv~~L~e~GfAvv 25 (137)
T COG1591 8 RFERELVRILWERGFAVV 25 (137)
T ss_pred hHHHHHHHHHHhcCceEE
Confidence 345689999999999999
No 326
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=24.06 E-value=40 Score=33.22 Aligned_cols=39 Identities=13% Similarity=0.163 Sum_probs=27.8
Q ss_pred HHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceE
Q 022749 154 LISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAA 196 (292)
Q Consensus 154 ~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~gl 196 (292)
+++.|.++ +..+=++.|-|.|+.++..|+... ++++..+
T Consensus 85 VlkaL~e~-gllp~iI~GtSAGAivaalla~~t---~~el~~~ 123 (407)
T cd07232 85 VVKALLDA-DLLPNVISGTSGGSLVAALLCTRT---DEELKQL 123 (407)
T ss_pred HHHHHHhC-CCCCCEEEEECHHHHHHHHHHcCC---HHHHHHH
Confidence 44555443 677778999999999999999854 4444433
No 327
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=23.76 E-value=1.8e+02 Score=24.88 Aligned_cols=38 Identities=13% Similarity=0.137 Sum_probs=24.3
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecc
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l 132 (292)
..+|.|-+..+|-+....-..+|..|++.|++|+.+|+
T Consensus 17 ~kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~ 54 (204)
T TIGR01007 17 IKVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDG 54 (204)
T ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 34444444333333344445789999999999998776
No 328
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=23.57 E-value=1.1e+02 Score=27.44 Aligned_cols=32 Identities=22% Similarity=0.189 Sum_probs=23.7
Q ss_pred HHHHHHHhcCCC--cEEEEEeChHHHHHHHHHHHh
Q 022749 154 LISYLINKDNSE--GVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 154 ~i~~l~~~~~~~--~vvLvGHSmGG~ial~ya~~~ 186 (292)
+++.|.++ ++. .-.+.|-|.|+.++..|+...
T Consensus 17 Vl~~L~e~-gi~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 17 VLSLLIEA-GVINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHc-CCCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 45555543 554 347999999999999999864
No 329
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=23.43 E-value=61 Score=27.10 Aligned_cols=38 Identities=18% Similarity=0.222 Sum_probs=24.2
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCC
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYG 140 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G 140 (292)
.+..|.+|.- +.++++.|.+.++.|+.+|+..+..+..
T Consensus 10 ~~~~V~~VG~----------f~P~~~~l~~~~~~v~v~d~~~~~~~~~ 47 (147)
T PF04016_consen 10 PGDKVGMVGY----------FQPLVEKLKERGAEVRVFDLNPDNIGEE 47 (147)
T ss_dssp TTSEEEEES------------HCCHHHHCCCCSEEEEEESSGGG--SS
T ss_pred CCCEEEEEcC----------cHHHHHHHhcCCCCEEEEECCCCCCCCC
Confidence 4566777633 3456778877899999888866555443
No 330
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=23.42 E-value=1.2e+02 Score=22.95 Aligned_cols=27 Identities=33% Similarity=0.274 Sum_probs=15.7
Q ss_pred eEEEECCCCCCCCChhhHHHHHHHHhhC
Q 022749 96 QVIFIGGLTDGFFATEYLEPLAIALDKE 123 (292)
Q Consensus 96 ~VV~vHG~~~g~~s~~~~~~la~~L~~~ 123 (292)
.|++-||-... .....+..+++.|.++
T Consensus 2 ivlv~hGS~~~-~~~~~~~~l~~~l~~~ 28 (101)
T cd03416 2 LLLVGHGSRDP-RAAEALEALAERLRER 28 (101)
T ss_pred EEEEEcCCCCH-HHHHHHHHHHHHHHhh
Confidence 46667887632 1233455677777654
No 331
>PF01872 RibD_C: RibD C-terminal domain; InterPro: IPR002734 This domain is found in the C terminus of the bifunctional deaminase-reductase of Escherichia coli, Bacillus subtilis and other bacteria in combination with IPR002125 from INTERPRO that catalyses the second and third steps in the biosynthesis of riboflavin, i.e., the deamination of 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (deaminase) and the subsequent reduction of the ribosyl side chain (reductase) []. The domain is also present in some HTP reductases from archaea and fungi.; GO: 0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity, 0009231 riboflavin biosynthetic process, 0055114 oxidation-reduction process; PDB: 3KY8_B 3KGY_B 2GD9_B 3JTW_B 2XW7_B 2D5N_B 2B3Z_A 3EX8_B 2AZN_A 2P4G_A ....
Probab=23.32 E-value=2.7e+02 Score=23.75 Aligned_cols=45 Identities=20% Similarity=0.345 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceEEE-eCCCC
Q 022749 150 EIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIF-QAPVS 203 (292)
Q Consensus 150 Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~glIL-~aP~~ 203 (292)
|+.++++.|+++ +.+++.+.| |+.++-.++.+ ..|+-+.| ++|+.
T Consensus 122 dl~~~l~~L~~~-g~~~i~v~G---G~~l~~~~l~~-----gLvDEl~l~i~Pv~ 167 (200)
T PF01872_consen 122 DLEEALRRLKER-GGKDILVEG---GGSLNGSFLRA-----GLVDELSLTIAPVL 167 (200)
T ss_dssp HHHHHHHHHHHT-TTSEEEEEE---HHHHHHHHHHT-----T--SEEEEEEESEE
T ss_pred CHHHHHHHHHhc-CCCEEEEec---hHHHHHHHHhC-----CCCCEEEEEEeeEE
Confidence 788889998876 889999988 88888877764 57888765 57754
No 332
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=23.26 E-value=2.1e+02 Score=26.37 Aligned_cols=59 Identities=12% Similarity=0.232 Sum_probs=35.0
Q ss_pred eEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEE
Q 022749 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLL 170 (292)
Q Consensus 96 ~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLv 170 (292)
.=++++|-.+. +.....+.+...+.+.|.++|.+. ..+..++..+++.+++. + .+++|+
T Consensus 53 nnvLL~G~rGt-GKSSlVkall~~y~~~GLRlIev~-------------k~~L~~l~~l~~~l~~~-~-~kFIlf 111 (249)
T PF05673_consen 53 NNVLLWGARGT-GKSSLVKALLNEYADQGLRLIEVS-------------KEDLGDLPELLDLLRDR-P-YKFILF 111 (249)
T ss_pred cceEEecCCCC-CHHHHHHHHHHHHhhcCceEEEEC-------------HHHhccHHHHHHHHhcC-C-CCEEEE
Confidence 34556886632 334556677888888899999553 13345566666666532 2 355554
No 333
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=23.21 E-value=1.3e+02 Score=25.27 Aligned_cols=32 Identities=19% Similarity=0.201 Sum_probs=23.7
Q ss_pred HHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHh
Q 022749 154 LISYLINKDNSEGVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 154 ~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~ 186 (292)
+++.+.+ .+...=++.|-|.|+.++..++..+
T Consensus 18 vl~~L~e-~g~~~d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 18 VLRALEE-EGIEIDIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred HHHHHHH-CCCCeeEEEEeCHHHHHHHHHHcCC
Confidence 3444443 3556678999999999999998764
No 334
>PLN02917 CMP-KDO synthetase
Probab=22.93 E-value=39 Score=31.60 Aligned_cols=14 Identities=43% Similarity=0.854 Sum_probs=9.2
Q ss_pred ccCCCccccc-cCCc
Q 022749 26 ATTSSSTSWF-SGIR 39 (292)
Q Consensus 26 ~~~~~~~~~~-~~~~ 39 (292)
+||||+.+|- .||+
T Consensus 9 ~~~~~~~~~~~~~~~ 23 (293)
T PLN02917 9 SSSSSTKSWIVHGIV 23 (293)
T ss_pred cccccchhHHhhhhc
Confidence 5667788885 4554
No 335
>PRK06523 short chain dehydrogenase; Provisional
Probab=22.86 E-value=3.9e+02 Score=23.29 Aligned_cols=49 Identities=6% Similarity=-0.062 Sum_probs=26.6
Q ss_pred HHHHHHHhhCCcEEEEecccccCCCCCC-C-CCC---CcHHHHHHHHHHHHHhcC
Q 022749 114 EPLAIALDKERWSLVQFLMTSSYTGYGT-S-SLQ---QDAMEIDQLISYLINKDN 163 (292)
Q Consensus 114 ~~la~~L~~~Gy~Vi~~~l~~D~~G~G~-S-~~~---~~v~Dl~~~i~~l~~~~~ 163 (292)
..+++.|.++|++|+.+....+. ..+. - -.. .+.++++++++.+.++.+
T Consensus 23 ~~ia~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (260)
T PRK06523 23 AATVARLLEAGARVVTTARSRPD-DLPEGVEFVAADLTTAEGCAAVARAVLERLG 76 (260)
T ss_pred HHHHHHHHHCCCEEEEEeCChhh-hcCCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence 36788888899999854321110 1110 0 011 234667777777765544
No 336
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=22.84 E-value=4.7e+02 Score=22.08 Aligned_cols=72 Identities=13% Similarity=0.156 Sum_probs=38.8
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEEeC
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHS 173 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGHS 173 (292)
.+.+|.--|+-. |+.. -+-+++.|+..||.|+. .|.=.+ .++ +++...+ .+..-|.+-+.+
T Consensus 13 prvlvak~GlDg--Hd~g-akvia~~l~d~GfeVi~-------~g~~~t-----p~e---~v~aA~~-~dv~vIgvSsl~ 73 (143)
T COG2185 13 PRVLVAKLGLDG--HDRG-AKVIARALADAGFEVIN-------LGLFQT-----PEE---AVRAAVE-EDVDVIGVSSLD 73 (143)
T ss_pred ceEEEeccCccc--cccc-hHHHHHHHHhCCceEEe-------cCCcCC-----HHH---HHHHHHh-cCCCEEEEEecc
Confidence 345555667543 3332 34578899999999982 232111 222 2222222 245566666777
Q ss_pred hHHHHHHHHHH
Q 022749 174 TGCQDIVHYMR 184 (292)
Q Consensus 174 mGG~ial~ya~ 184 (292)
-|...-...+.
T Consensus 74 g~h~~l~~~lv 84 (143)
T COG2185 74 GGHLTLVPGLV 84 (143)
T ss_pred chHHHHHHHHH
Confidence 77665555443
No 337
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=22.81 E-value=1.6e+02 Score=26.29 Aligned_cols=35 Identities=17% Similarity=0.109 Sum_probs=24.3
Q ss_pred eEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecc
Q 022749 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (292)
Q Consensus 96 ~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l 132 (292)
+|.++ |-| |-+....-..+|..|+++|++|+.+|+
T Consensus 3 ~iav~-~KG-GvGKTT~~~nLA~~La~~G~kVlliD~ 37 (270)
T cd02040 3 QIAIY-GKG-GIGKSTTTQNLSAALAEMGKKVMIVGC 37 (270)
T ss_pred EEEEE-eCC-cCCHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 45556 644 333344445789999999999997776
No 338
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively.
Probab=22.69 E-value=5.9e+02 Score=23.23 Aligned_cols=99 Identities=14% Similarity=0.171 Sum_probs=56.9
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEEeC
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHS 173 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGHS 173 (292)
.|.++-|.|.. ...|...++.+.+.|++.+.+++.......+......+.+.+.++++.+++.. +..+.+--+
T Consensus 90 ~p~ivsi~g~~-----~~~~~~~a~~~~~~G~d~iElN~~cP~~~~~g~~~~~~~~~~~eiv~~vr~~~--~~Pv~vKl~ 162 (296)
T cd04740 90 TPVIASIAGST-----VEEFVEVAEKLADAGADAIELNISCPNVKGGGMAFGTDPEAVAEIVKAVKKAT--DVPVIVKLT 162 (296)
T ss_pred CcEEEEEecCC-----HHHHHHHHHHHHHcCCCEEEEECCCCCCCCCcccccCCHHHHHHHHHHHHhcc--CCCEEEEeC
Confidence 56777776643 44567788888888999998887554432222233455677788888887653 233444444
Q ss_pred hHHHHHHHHHHHhccCccccceEEEeCC
Q 022749 174 TGCQDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 174 mGG~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
..---...++.... ..-++++++...
T Consensus 163 ~~~~~~~~~a~~~~--~~G~d~i~~~nt 188 (296)
T cd04740 163 PNVTDIVEIARAAE--EAGADGLTLINT 188 (296)
T ss_pred CCchhHHHHHHHHH--HcCCCEEEEECC
Confidence 33212223332210 234788887643
No 339
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=22.62 E-value=5.9e+02 Score=23.49 Aligned_cols=74 Identities=12% Similarity=0.085 Sum_probs=44.5
Q ss_pred HHHHhhCCcEEEEecccccCCCCCCC-----CCCCcHHHHHHHHHHHHHh-cCCCcEEEEEeChHHH----HHHHHHHHh
Q 022749 117 AIALDKERWSLVQFLMTSSYTGYGTS-----SLQQDAMEIDQLISYLINK-DNSEGVVLLGHSTGCQ----DIVHYMRAN 186 (292)
Q Consensus 117 a~~L~~~Gy~Vi~~~l~~D~~G~G~S-----~~~~~v~Dl~~~i~~l~~~-~~~~~vvLvGHSmGG~----ial~ya~~~ 186 (292)
++.|++.+..|+.+|+ -|-... .++..++|....+..|.+. ...-+-+.+|-+.|+. -|+..++++
T Consensus 103 ~eklk~~~vdvvsLDf----vgDn~vIk~vy~l~ksv~dyl~~l~~L~e~~irvvpHitiGL~~gki~~e~kaIdiL~~~ 178 (275)
T COG1856 103 LEKLKEELVDVVSLDF----VGDNDVIKRVYKLPKSVEDYLRSLLLLKENGIRVVPHITIGLDFGKIHGEFKAIDILVNY 178 (275)
T ss_pred HHHHHHhcCcEEEEee----cCChHHHHHHHcCCccHHHHHHHHHHHHHcCceeceeEEEEeccCcccchHHHHHHHhcC
Confidence 3455556677774444 332111 1245577777777777543 2345678999999875 466767766
Q ss_pred ccCccccceEEEe
Q 022749 187 AACSRAVRAAIFQ 199 (292)
Q Consensus 187 ~~~p~~V~glIL~ 199 (292)
..+++||.
T Consensus 179 -----~~DalVl~ 186 (275)
T COG1856 179 -----EPDALVLV 186 (275)
T ss_pred -----CCCeEEEE
Confidence 46676664
No 340
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=22.51 E-value=1.3e+02 Score=25.62 Aligned_cols=38 Identities=18% Similarity=0.098 Sum_probs=24.6
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecc
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l 132 (292)
++.||++-|+.+. +....-..+.+.|.+.|+.|+.+|.
T Consensus 1 ~g~vIwltGlsGs-GKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGS-GKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTS-SHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCC-CHHHHHHHHHHHHHHcCCcEEEecC
Confidence 4689999999842 2223334567778788999997653
No 341
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=22.41 E-value=1.7e+02 Score=25.46 Aligned_cols=73 Identities=19% Similarity=0.160 Sum_probs=40.4
Q ss_pred HHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHHHHHHhccCccccceE
Q 022749 117 AIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAA 196 (292)
Q Consensus 117 a~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~ya~~~~~~p~~V~gl 196 (292)
.+.+.++++.++ .+|-+|....+ ....+++..+++.+ ....++|+=-+..++..+.-+.++. ..-.++++
T Consensus 76 l~~~~~~~~D~v----lIDT~Gr~~~d-~~~~~el~~~~~~~----~~~~~~LVlsa~~~~~~~~~~~~~~-~~~~~~~l 145 (196)
T PF00448_consen 76 LEKFRKKGYDLV----LIDTAGRSPRD-EELLEELKKLLEAL----NPDEVHLVLSATMGQEDLEQALAFY-EAFGIDGL 145 (196)
T ss_dssp HHHHHHTTSSEE----EEEE-SSSSTH-HHHHHHHHHHHHHH----SSSEEEEEEEGGGGGHHHHHHHHHH-HHSSTCEE
T ss_pred HHHHhhcCCCEE----EEecCCcchhh-HHHHHHHHHHhhhc----CCccceEEEecccChHHHHHHHHHh-hcccCceE
Confidence 344556789999 45556664321 12234455544444 3456777766666666666554431 12358999
Q ss_pred EEe
Q 022749 197 IFQ 199 (292)
Q Consensus 197 IL~ 199 (292)
|+-
T Consensus 146 IlT 148 (196)
T PF00448_consen 146 ILT 148 (196)
T ss_dssp EEE
T ss_pred EEE
Confidence 974
No 342
>PRK05854 short chain dehydrogenase; Provisional
Probab=22.29 E-value=6.1e+02 Score=23.24 Aligned_cols=75 Identities=13% Similarity=-0.000 Sum_probs=36.5
Q ss_pred HHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEEeChHHHHHHH-HHHHhccCcccc
Q 022749 115 PLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVH-YMRANAACSRAV 193 (292)
Q Consensus 115 ~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGHSmGG~ial~-ya~~~~~~p~~V 193 (292)
.+++.|.++|++|+.. + + ..+..+++++.+.+..+..++..+---+.-.-.+. ++.+......+|
T Consensus 29 ~~a~~La~~G~~Vil~----~-----R-----~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~i 94 (313)
T PRK05854 29 GLARRLAAAGAEVILP----V-----R-----NRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPI 94 (313)
T ss_pred HHHHHHHHCCCEEEEE----e-----C-----CHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 5788898899999832 1 1 12334444454443323334544443333322222 111110113468
Q ss_pred ceEEEeCCCC
Q 022749 194 RAAIFQAPVS 203 (292)
Q Consensus 194 ~glIL~aP~~ 203 (292)
+.+|..+...
T Consensus 95 D~li~nAG~~ 104 (313)
T PRK05854 95 HLLINNAGVM 104 (313)
T ss_pred cEEEECCccc
Confidence 8888776543
No 343
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=22.11 E-value=1.2e+02 Score=27.36 Aligned_cols=32 Identities=13% Similarity=0.327 Sum_probs=23.1
Q ss_pred HHHHHHHhcCCC-cEEEEEeChHHHHHHHHHHHh
Q 022749 154 LISYLINKDNSE-GVVLLGHSTGCQDIVHYMRAN 186 (292)
Q Consensus 154 ~i~~l~~~~~~~-~vvLvGHSmGG~ial~ya~~~ 186 (292)
+++.+.++ +.. -=++.|-|.|+.++..|+...
T Consensus 16 vl~al~e~-~~~~fd~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 16 VLDAFLEA-GIRPFDLVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred HHHHHHHc-CCCCCCEEEEECHHHHhHHHHHhCC
Confidence 44454433 444 448899999999999998864
No 344
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=22.08 E-value=6.1e+02 Score=23.18 Aligned_cols=72 Identities=11% Similarity=0.174 Sum_probs=42.9
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCc-EEEEecccccCCCCCCCCC---CCcHHHHHHHHHHHHHhcCCCcE
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERW-SLVQFLMTSSYTGYGTSSL---QQDAMEIDQLISYLINKDNSEGV 167 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy-~Vi~~~l~~D~~G~G~S~~---~~~v~Dl~~~i~~l~~~~~~~~v 167 (292)
..+.+|++--|+. .+..-|...++.+.+.|- .++. -++|. +.. +...-|+..+. .+++..+ -+|
T Consensus 130 ~~gkPVilk~G~~---~t~~e~~~Ave~i~~~Gn~~i~l-----~~rG~--s~y~~~~~~~~dl~~i~-~lk~~~~-~pV 197 (260)
T TIGR01361 130 KQGKPVLLKRGMG---NTIEEWLYAAEYILSSGNGNVIL-----CERGI--RTFEKATRNTLDLSAVP-VLKKETH-LPI 197 (260)
T ss_pred cCCCcEEEeCCCC---CCHHHHHHHHHHHHHcCCCcEEE-----EECCC--CCCCCCCcCCcCHHHHH-HHHHhhC-CCE
Confidence 3577999999988 566667777888887775 3442 22322 221 22223444433 3344333 578
Q ss_pred EE-EEeChH
Q 022749 168 VL-LGHSTG 175 (292)
Q Consensus 168 vL-vGHSmG 175 (292)
.+ -+||.|
T Consensus 198 ~~ds~Hs~G 206 (260)
T TIGR01361 198 IVDPSHAAG 206 (260)
T ss_pred EEcCCCCCC
Confidence 88 799988
No 345
>PRK10343 RNA-binding protein YhbY; Provisional
Probab=21.70 E-value=4e+02 Score=20.88 Aligned_cols=64 Identities=14% Similarity=0.303 Sum_probs=40.2
Q ss_pred CCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEEe
Q 022749 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGH 172 (292)
Q Consensus 93 ~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGH 172 (292)
.-.+||.|..-| .+......+-++|..+ .++-+.. ....-+|..++++.+.++.+.+-|-++||
T Consensus 17 ~l~Pvv~IGk~G---lt~~vi~ei~~aL~~h--ELIKvkv-----------~~~~~~~~~e~~~~i~~~~~ae~Vq~IG~ 80 (97)
T PRK10343 17 PLKPVVLLGSNG---LTEGVLAEIEQALEHH--ELIKVKI-----------ATEDRETKTLIVEAIVRETGACNVQVIGK 80 (97)
T ss_pred CCCCeEEECCCC---CCHHHHHHHHHHHHHC--CcEEEEe-----------cCCChhHHHHHHHHHHHHHCCEEEeeeCc
Confidence 346788887665 5566677888888864 4443322 12234566777777766656666777776
No 346
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=21.65 E-value=2.3e+02 Score=24.60 Aligned_cols=15 Identities=13% Similarity=0.366 Sum_probs=12.3
Q ss_pred HHHHHHHhhCCcEEE
Q 022749 114 EPLAIALDKERWSLV 128 (292)
Q Consensus 114 ~~la~~L~~~Gy~Vi 128 (292)
.-++..|...||.|+
T Consensus 100 ~~v~~~l~~~G~~vi 114 (201)
T cd02070 100 NLVATMLEANGFEVI 114 (201)
T ss_pred HHHHHHHHHCCCEEE
Confidence 356788889999997
No 347
>cd04888 ACT_PheB-BS C-terminal ACT domain of a small (~147 a.a.) putative phenylalanine biosynthetic pathway protein described in Bacillus subtilis (BS) PheB (PheB-BS) and related domains. This CD includes the C-terminal ACT domain of a small (~147 a.a.) putative phenylalanine biosynthetic pathway protein described in Bacillus subtilis (BS) PheB (PheB-BS) and other related ACT domains. In B. subtilis, the upstream gene of pheB, pheA encodes prephenate dehydratase (PDT). The presumed product of the pheB gene is chorismate mutase (CM). The deduced product of the B. subtilis pheB gene, however, has no significant homology to the CM portion of the bifunctional CM-PDT of Escherichia coli. The presence of an ACT domain lends support to the prediction that these proteins function as a phenylalanine-binding regulatory protein. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=21.30 E-value=1.9e+02 Score=20.24 Aligned_cols=59 Identities=20% Similarity=0.241 Sum_probs=36.2
Q ss_pred HHHHHHHHhhCCcEEEEecccccCCCCCCCC---CCCcHH-HHHHHHHHHHHhcCCCcEEEEE
Q 022749 113 LEPLAIALDKERWSLVQFLMTSSYTGYGTSS---LQQDAM-EIDQLISYLINKDNSEGVVLLG 171 (292)
Q Consensus 113 ~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~---~~~~v~-Dl~~~i~~l~~~~~~~~vvLvG 171 (292)
+..+...|++.|..+..++...+..|...-. ...+.+ ++..+++.|++-.+...|.++|
T Consensus 14 l~~I~~~la~~~inI~~i~~~~~~~~~~~i~~~v~v~~~~~~l~~l~~~L~~i~~V~~v~~~~ 76 (76)
T cd04888 14 LSKVLNTIAQVRGNVLTINQNIPIHGRANVTISIDTSTMNGDIDELLEELREIDGVEKVELVG 76 (76)
T ss_pred HHHHHHHHHHcCCCEEEEEeCCCCCCeEEEEEEEEcCchHHHHHHHHHHHhcCCCeEEEEEeC
Confidence 5678899999999988654321111211111 124455 8888888887655666777665
No 348
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=21.29 E-value=2.6e+02 Score=21.69 Aligned_cols=15 Identities=20% Similarity=0.322 Sum_probs=12.3
Q ss_pred HHHHHHHhhCCcEEE
Q 022749 114 EPLAIALDKERWSLV 128 (292)
Q Consensus 114 ~~la~~L~~~Gy~Vi 128 (292)
.-++..|.+.||.|+
T Consensus 17 ~~~~~~l~~~G~~V~ 31 (119)
T cd02067 17 NIVARALRDAGFEVI 31 (119)
T ss_pred HHHHHHHHHCCCEEE
Confidence 357788888999997
No 349
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively. DHPD catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines. DHPD contains two FAD, two FMN and eight [4Fe-4S] clusters, arranged in two electron transfer chains that pass its homodimeric interface twice. Two of
Probab=21.09 E-value=6.3e+02 Score=22.91 Aligned_cols=99 Identities=18% Similarity=0.210 Sum_probs=58.4
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEEeC
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHS 173 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~vvLvGHS 173 (292)
.|.++-|-|.. ...|...++.+.+.|+..+.+++.......+. ....+.+.+.++++.+++.. +..+.+.-+
T Consensus 99 ~pvi~si~g~~-----~~~~~~~a~~~~~~G~d~ielN~~cP~~~~~~-~~~~~~~~~~eiv~~vr~~~--~~pv~vKl~ 170 (289)
T cd02810 99 QPLIASVGGSS-----KEDYVELARKIERAGAKALELNLSCPNVGGGR-QLGQDPEAVANLLKAVKAAV--DIPLLVKLS 170 (289)
T ss_pred CeEEEEeccCC-----HHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCc-ccccCHHHHHHHHHHHHHcc--CCCEEEEeC
Confidence 45666676643 34466788888888899998887544433332 24456677888888887653 345666655
Q ss_pred hHHH--HHHHHHHHhccCccccceEEEeCCC
Q 022749 174 TGCQ--DIVHYMRANAACSRAVRAAIFQAPV 202 (292)
Q Consensus 174 mGG~--ial~ya~~~~~~p~~V~glIL~aP~ 202 (292)
.+-- -....+.... ..-++++++.+..
T Consensus 171 ~~~~~~~~~~~a~~l~--~~Gad~i~~~~~~ 199 (289)
T cd02810 171 PYFDLEDIVELAKAAE--RAGADGLTAINTI 199 (289)
T ss_pred CCCCHHHHHHHHHHHH--HcCCCEEEEEccc
Confidence 4421 1222222210 2348888887543
No 350
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=21.05 E-value=3.2e+02 Score=22.29 Aligned_cols=24 Identities=8% Similarity=0.207 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEE
Q 022749 148 AMEIDQLISYLINKDNSEGVVLLG 171 (292)
Q Consensus 148 v~Dl~~~i~~l~~~~~~~~vvLvG 171 (292)
.+.+.++++.++++.+..++++++
T Consensus 73 ~~~~~~lv~~i~~~~~~~~iil~~ 96 (171)
T cd04502 73 LRDFRELVNRIRAKLPDTPIAIIS 96 (171)
T ss_pred HHHHHHHHHHHHHHCCCCcEEEEE
Confidence 345556666655544444566655
No 351
>PLN02978 pyridoxal kinase
Probab=20.89 E-value=3.3e+02 Score=25.40 Aligned_cols=94 Identities=17% Similarity=0.085 Sum_probs=52.6
Q ss_pred EECCCCCCCCChhhHHHHHHHHhhCCcEEEEecc--cccCCCCCCCCCCC-cHHHHHHHHHHHHHhcCC--CcEEEEEe-
Q 022749 99 FIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM--TSSYTGYGTSSLQQ-DAMEIDQLISYLINKDNS--EGVVLLGH- 172 (292)
Q Consensus 99 ~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l--~~D~~G~G~S~~~~-~v~Dl~~~i~~l~~~~~~--~~vvLvGH- 172 (292)
-+||.+.+. ..... |+..|+.|..+.. ...|.|||.-...+ ..+++..+++.+... +. -..+++|.
T Consensus 24 ~~~g~~g~~------~a~~p-l~~~g~~v~~lpTv~lSnhtgy~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~ai~~G~l 95 (308)
T PLN02978 24 TVHGYVGNK------SAVFP-LQLLGFDVDPINSVQFSNHTGYPTFKGQVLDGEQLWALIEGLEAN-GLLFYTHLLTGYI 95 (308)
T ss_pred eeecCCCce------ehHhh-HHHcCCeeeeeccEeecCCCCCCCceeeeCCHHHHHHHHHHHHHc-CCcccCEEEeccc
Confidence 467888431 12233 7778999986542 36788998654333 345788888877542 11 24556664
Q ss_pred --ChHHHHHHHHHHHhccCccc-cceEEEeCCCC
Q 022749 173 --STGCQDIVHYMRANAACSRA-VRAAIFQAPVS 203 (292)
Q Consensus 173 --SmGG~ial~ya~~~~~~p~~-V~glIL~aP~~ 203 (292)
.-....+..++.+. ... .+-.+++.|+.
T Consensus 96 ~s~~~~~~v~~~l~~~---~~~~~~~~vvlDPvm 126 (308)
T PLN02978 96 GSVSFLRTVLRVVKKL---RSVNPNLTYVCDPVL 126 (308)
T ss_pred CCHHHHHHHHHHHHHH---HHhCCCCeEEECCcc
Confidence 34444455555544 221 22345667764
No 352
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=20.89 E-value=3.9e+02 Score=28.62 Aligned_cols=65 Identities=15% Similarity=0.125 Sum_probs=40.1
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHH
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLIN 160 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~ 160 (292)
.+-++++||-.|.--....-..+.++|..+|..+-.+ .+.--.||.+.......-...+..++.+
T Consensus 682 ~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~--vypde~H~is~~~~~~~~~~~~~~~~~~ 746 (755)
T KOG2100|consen 682 TPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLL--VYPDENHGISYVEVISHLYEKLDRFLRD 746 (755)
T ss_pred cCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEE--EeCCCCcccccccchHHHHHHHHHHHHH
Confidence 4458999999975433232246788999888664322 4455678887655433344555556553
No 353
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=20.63 E-value=1.6e+02 Score=24.42 Aligned_cols=24 Identities=25% Similarity=0.191 Sum_probs=18.9
Q ss_pred HHHHHHHHhhCCcEEEEecccccCCC
Q 022749 113 LEPLAIALDKERWSLVQFLMTSSYTG 138 (292)
Q Consensus 113 ~~~la~~L~~~Gy~Vi~~~l~~D~~G 138 (292)
-..+|..|++.|++|+.+|+ |.+|
T Consensus 17 a~~LA~~la~~g~~vllvD~--D~q~ 40 (169)
T cd02037 17 AVNLALALAKLGYKVGLLDA--DIYG 40 (169)
T ss_pred HHHHHHHHHHcCCcEEEEeC--CCCC
Confidence 34688999989999998776 6655
No 354
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=20.42 E-value=2.2e+02 Score=24.34 Aligned_cols=41 Identities=15% Similarity=0.288 Sum_probs=28.3
Q ss_pred CcHHHHHHHHHHHHHhcCCCcEEEE----EeChHHHHHHHHHHHh
Q 022749 146 QDAMEIDQLISYLINKDNSEGVVLL----GHSTGCQDIVHYMRAN 186 (292)
Q Consensus 146 ~~v~Dl~~~i~~l~~~~~~~~vvLv----GHSmGG~ial~ya~~~ 186 (292)
.+.+|+..+++++.+.....+-++| |.|.-|.++..|+..+
T Consensus 86 p~~~~l~~~v~~i~~~~~~g~kVvVHC~~GigRSgtviaA~lm~~ 130 (180)
T COG2453 86 PDLEDLDKIVDFIEEALSKGKKVVVHCQGGIGRSGTVIAAYLMLY 130 (180)
T ss_pred CcHHHHHHHHHHHHHHHhcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 3448888888888654433434443 8898888888877765
No 355
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=20.30 E-value=3.5e+02 Score=27.04 Aligned_cols=75 Identities=16% Similarity=0.220 Sum_probs=41.4
Q ss_pred HHHHHHhhCCcEEEEecccccCCCCCCCCCCCcHHHHHHHHHHHHHh--cCCCcEEEEEeChHHH-HHHHHHHHhccCcc
Q 022749 115 PLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINK--DNSEGVVLLGHSTGCQ-DIVHYMRANAACSR 191 (292)
Q Consensus 115 ~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~~~~~v~Dl~~~i~~l~~~--~~~~~vvLvGHSmGG~-ial~ya~~~~~~p~ 191 (292)
.+.+.+.+.+++++ .+|-+|+.. .+...++.+.+.+... .....++||=-++.+. .....+..+ ..-
T Consensus 290 ~l~~~l~~~~~D~V----LIDTaGr~~----rd~~~l~eL~~~~~~~~~~~~~e~~LVLsAt~~~~~~~~~~~~f--~~~ 359 (432)
T PRK12724 290 KFKETLARDGSELI----LIDTAGYSH----RNLEQLERMQSFYSCFGEKDSVENLLVLSSTSSYHHTLTVLKAY--ESL 359 (432)
T ss_pred HHHHHHHhCCCCEE----EEeCCCCCc----cCHHHHHHHHHHHHhhcCCCCCeEEEEEeCCCCHHHHHHHHHHh--cCC
Confidence 44555655688988 555566532 3334555554444221 1122456665555555 555566655 245
Q ss_pred ccceEEEe
Q 022749 192 AVRAAIFQ 199 (292)
Q Consensus 192 ~V~glIL~ 199 (292)
.++++|+-
T Consensus 360 ~~~glIlT 367 (432)
T PRK12724 360 NYRRILLT 367 (432)
T ss_pred CCCEEEEE
Confidence 68999974
No 356
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=20.29 E-value=2.6e+02 Score=29.26 Aligned_cols=48 Identities=23% Similarity=0.312 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEe------ChHHHHHHHHHHHhccCccccceEEEeCC
Q 022749 148 AMEIDQLISYLINKDNSEGVVLLGH------STGCQDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 148 v~Dl~~~i~~l~~~~~~~~vvLvGH------SmGG~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
++.+-.++..+.. ..++|+++|| +.|+.+++...+.. ..+ ++.|++.|
T Consensus 323 aRvis~al~d~i~--e~d~VfImGHk~pDmDalGsAig~~~~A~~---~~~-~a~~v~dp 376 (655)
T COG3887 323 ARVISTALSDIIK--ESDNVFIMGHKFPDMDALGSAIGMQKFASM---NNK-EAFAVLDP 376 (655)
T ss_pred HHHHHHHHHHHHh--hcCcEEEEccCCCChHHHHHHHHHHHHHHh---ccc-ccEEEECc
Confidence 4566666666554 3689999999 89999999865553 233 56666655
No 357
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=20.27 E-value=1.6e+02 Score=28.04 Aligned_cols=45 Identities=31% Similarity=0.304 Sum_probs=32.9
Q ss_pred CceEEEECCCCC-CCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCC
Q 022749 94 QQQVIFIGGLTD-GFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS 143 (292)
Q Consensus 94 ~~~VV~vHG~~~-g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~ 143 (292)
..+||.|..++- |.+..+....+++.|.++||++..+ -||||...
T Consensus 34 ~vpVIsVGNltvGGTGKTP~v~~L~~~L~~~G~~~~Il-----SRGYg~~~ 79 (326)
T PF02606_consen 34 PVPVISVGNLTVGGTGKTPLVIWLARLLQARGYRPAIL-----SRGYGRKS 79 (326)
T ss_pred CCcEEEEcccccCCCCchHHHHHHHHHHHhcCCceEEE-----cCCCCCCC
Confidence 457888888753 4455777778999999999998633 26888643
No 358
>PRK06398 aldose dehydrogenase; Validated
Probab=20.22 E-value=3.7e+02 Score=23.69 Aligned_cols=61 Identities=20% Similarity=0.319 Sum_probs=32.7
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCCC-C---CCcHHHHHHHHHHHHHhcC
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS-L---QQDAMEIDQLISYLINKDN 163 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S~-~---~~~v~Dl~~~i~~l~~~~~ 163 (292)
..+|+..|-+ +.+ ..+++.|.++|++|+..+.. ........ . -.+.++++++++.+.++.+
T Consensus 7 k~vlItGas~-gIG-----~~ia~~l~~~G~~Vi~~~r~--~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 71 (258)
T PRK06398 7 KVAIVTGGSQ-GIG-----KAVVNRLKEEGSNVINFDIK--EPSYNDVDYFKVDVSNKEQVIKGIDYVISKYG 71 (258)
T ss_pred CEEEEECCCc-hHH-----HHHHHHHHHCCCeEEEEeCC--ccccCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4555555543 221 35888898899999954321 11111000 1 1234677788887766544
No 359
>KOG2614 consensus Kynurenine 3-monooxygenase and related flavoprotein monooxygenases [Energy production and conversion; General function prediction only]
Probab=20.18 E-value=1.1e+02 Score=30.32 Aligned_cols=41 Identities=29% Similarity=0.426 Sum_probs=30.4
Q ss_pred ceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccCCCCCCC
Q 022749 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS 142 (292)
Q Consensus 95 ~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~~G~G~S 142 (292)
+-||++.|--.|. ..|-+|.+.||+|+.++.+-|.||-|.+
T Consensus 3 ~~VvIvGgGI~Gl-------a~A~~l~r~G~~v~VlE~~e~~R~~g~s 43 (420)
T KOG2614|consen 3 PKVVIVGGGIVGL-------ATALALHRKGIDVVVLESREDPRGEGTS 43 (420)
T ss_pred CcEEEECCcHHHH-------HHHHHHHHcCCeEEEEeeccccccCCcc
Confidence 5577776643221 3456678899999999999999998876
No 360
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=20.06 E-value=3.8e+02 Score=27.10 Aligned_cols=37 Identities=3% Similarity=0.096 Sum_probs=27.0
Q ss_pred CceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEe
Q 022749 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQF 130 (292)
Q Consensus 94 ~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~ 130 (292)
+.+||++.-+...++..+..+.....|.+.|+.|+-+
T Consensus 180 ~~PvliaPaMN~~M~~npat~~Nl~~L~~~G~~vi~P 216 (475)
T PRK13982 180 NRPILLAPAMNPLMWNNPATRRNVAQLKRDGVHMIGP 216 (475)
T ss_pred CCCEEEEEcCCHHHhcCHHHHHHHHHHHHCCCEEECC
Confidence 5688888888765544555556678888899999944
No 361
>cd02801 DUS_like_FMN Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also in some archaea. Most dihydrouridines are found in the D loop of t-RNAs. The role of dihydrouridine in tRNA is currently unknown, but may increase conformational flexibility of the tRNA. It is likely that different family members have different substrate specificities, which may overlap. 1VHN, a putative flavin oxidoreductase, has high sequence similarity to DUS. The enzymatic mechanism of 1VHN is not known at the present.
Probab=20.04 E-value=5.8e+02 Score=22.07 Aligned_cols=100 Identities=14% Similarity=0.167 Sum_probs=55.9
Q ss_pred CCCceEEEECCCCCCCCChhhHHHHHHHHhhCCcEEEEecccccC-----CCCCCCCCCCcHHHHHHHHHHHHHhcCCCc
Q 022749 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSY-----TGYGTSSLQQDAMEIDQLISYLINKDNSEG 166 (292)
Q Consensus 92 ~~~~~VV~vHG~~~g~~s~~~~~~la~~L~~~Gy~Vi~~~l~~D~-----~G~G~S~~~~~v~Dl~~~i~~l~~~~~~~~ 166 (292)
...|.++-++|.. ...+...++.+.+.||..+.+++.... .++|. .+....+-+.++++.+++..+ .+
T Consensus 53 ~~~p~~~qi~g~~-----~~~~~~aa~~~~~aG~d~ieln~g~p~~~~~~~~~G~-~l~~~~~~~~eii~~v~~~~~-~~ 125 (231)
T cd02801 53 EERPLIVQLGGSD-----PETLAEAAKIVEELGADGIDLNMGCPSPKVTKGGAGA-ALLKDPELVAEIVRAVREAVP-IP 125 (231)
T ss_pred cCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCCEEEEeCCCCHHHHhCCCeee-hhcCCHHHHHHHHHHHHHhcC-CC
Confidence 3456777787753 334566778888789999988764321 13343 233455667777887776544 23
Q ss_pred EEEEEeChHH---HHHHHHHHHhccCccccceEEEeCC
Q 022749 167 VVLLGHSTGC---QDIVHYMRANAACSRAVRAAIFQAP 201 (292)
Q Consensus 167 vvLvGHSmGG---~ial~ya~~~~~~p~~V~glIL~aP 201 (292)
+.+.-..|- ..+..++.... ...++.+.+.+.
T Consensus 126 -v~vk~r~~~~~~~~~~~~~~~l~--~~Gvd~i~v~~~ 160 (231)
T cd02801 126 -VTVKIRLGWDDEEETLELAKALE--DAGASALTVHGR 160 (231)
T ss_pred -EEEEEeeccCCchHHHHHHHHHH--HhCCCEEEECCC
Confidence 344444332 13444444331 124677766543
Done!