BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022751
(292 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P52661|GBPR_AZOBR HTH-type transcriptional regulator GbpR OS=Azospirillum brasilense
GN=gbpR PE=1 SV=1
Length = 342
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 219 SVSVGTAIAAFVLAVLEGATQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVMNKAPWM 278
SVS+GT +A V V+ T P+ +A+E +VL +R QG ++F + + P
Sbjct: 107 SVSIGTVMAPAVELVVPVITTLTRDHPDLKIAVAVETSDVLAERVRQGVMDFAIGRLPDH 166
Query: 279 VE 280
V+
Sbjct: 167 VD 168
>sp|P70117|LG3BP_MESAU Galectin-3-binding protein OS=Mesocricetus auratus GN=LGALS3BP PE=2
SV=1
Length = 578
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 173 VQQLVQLFDPVVRAFDGIAGERVSMRVDLECTD-GRNTVGIFSHRRLSVSVGTAIAAFVL 231
+L+ +P +A + G V MRVD EC R+ + F RR+ V++ + L
Sbjct: 171 AHKLILNTNPEAQALWQVVGSSVIMRVDAECMPVVRDFLRYFYSRRIEVTMSSVKCLHKL 230
Query: 232 AVLEGATQ 239
A GATQ
Sbjct: 231 ASAYGATQ 238
>sp|P20151|KLK2_HUMAN Kallikrein-2 OS=Homo sapiens GN=KLK2 PE=2 SV=1
Length = 261
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 67/163 (41%), Gaps = 36/163 (22%)
Query: 118 KDVFLLNLPE---VRSAREVLGVPTVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSKVQ 174
D+ LL L E + +VLG+PT GT + WG + P E+LR RS
Sbjct: 119 HDLMLLRLSEPAKITDVVKVLGLPTQEPALGTTCYASGWGSIE-----PEEFLRPRS--L 171
Query: 175 QLVQLF----DPVVRAFDGIAGERVS--MRVDLECTDGRNTVGIFSHRRLSVSVGTAIAA 228
Q V L D RA+ E+V+ M T G++T G S L +
Sbjct: 172 QCVSLHLLSNDMCARAYS----EKVTEFMLCAGLWTGGKDTCGGDSGGPLVCN------- 220
Query: 229 FVLAVLEGATQPGVWFPEE---PEGIAIEAREVLLKRASQGTI 268
VL+G T W PE PE A+ + V ++ + TI
Sbjct: 221 ---GVLQGITS---WGPEPCALPEKPAVYTKVVHYRKWIKDTI 257
>sp|A8LQI0|PSUG_DINSH Pseudouridine-5'-phosphate glycosidase OS=Dinoroseobacter shibae
(strain DFL 12) GN=psuG PE=3 SV=1
Length = 305
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 30 ILILTDICYMTVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFL--LLGE 87
I +L + + + A EL +A+ + + R Y + AG T+ AT + + G
Sbjct: 62 IAVLDGVLKIGLGADELEALAKVKDALKISRADIGYAISQGKSAGTTVAATMIVAQMAGI 121
Query: 88 EVVA------YNKGEEITLEPYSGMLSVDFGKGIGRKDVF--------LLNLPEVRSARE 133
V A +KG E + + +S D + +GR DV +L++P+ E
Sbjct: 122 RVFATGGIGGVHKGVETSFD-----ISADLTE-LGRTDVIVVAAGAKAILDVPKTLEVLE 175
Query: 134 VLGVPTVSARFGTAPFFWNWG--MVTMQRLFPAEYLRDRSKVQQLVQL 179
GV V R T P FW G + RL A + + KV+ ++L
Sbjct: 176 TQGVSVVGYRTDTLPAFWTSGSDLDIPLRLDSAAEISEFQKVRDALRL 223
>sp|Q07797|LG3BP_MOUSE Galectin-3-binding protein OS=Mus musculus GN=Lgals3bp PE=1 SV=1
Length = 577
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 181 DPVVRAFDGIAGERVSMRVDLECTD-GRNTVGIFSHRRLSVSVGTAIAAFVLAVLEGATQ 239
+P +A + G V MRVD EC R+ + F RR+ VS+ + LA GAT+
Sbjct: 179 NPEAQALWQVVGSSVIMRVDAECMPVVRDFLRYFYSRRIEVSMSSVKCLHKLASAYGATE 238
>sp|O70513|LG3BP_RAT Galectin-3-binding protein OS=Rattus norvegicus GN=Lgals3bp PE=1
SV=2
Length = 574
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 181 DPVVRAFDGIAGERVSMRVDLECTD-GRNTVGIFSHRRLSVSVGTAIAAFVLAVLEGATQ 239
+P +A + G V MRVD EC R+ + F RR+ VS+ + LA GAT+
Sbjct: 179 NPEAQALWQVVGSSVIMRVDAECMPVVRDFLRYFYSRRIEVSMSSVKCLHKLASAYGATE 238
>sp|Q13424|SNTA1_HUMAN Alpha-1-syntrophin OS=Homo sapiens GN=SNTA1 PE=1 SV=1
Length = 505
Score = 31.6 bits (70), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 232 AVLEGATQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVM-----NKAPWMV 279
A L GA +PG P+ PE + ++ R V +++A G + + NK P ++
Sbjct: 62 AQLNGAAEPGAGPPQLPEALLLQRRRVTVRKADAGGLGISIKGGRENKMPILI 114
>sp|Q0P5E6|SNTA1_BOVIN Alpha-1-syntrophin OS=Bos taurus GN=SNTA1 PE=2 SV=1
Length = 505
Score = 31.2 bits (69), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 232 AVLEGATQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVM-----NKAPWMV 279
A L GA +PG P PE + ++ R V +++A G + + NK P ++
Sbjct: 62 AQLNGAAEPGAASPPLPEALLLQPRRVTVRKADAGGLGISIKGGRENKMPILI 114
>sp|Q61234|SNTA1_MOUSE Alpha-1-syntrophin OS=Mus musculus GN=Snta1 PE=1 SV=1
Length = 503
Score = 31.2 bits (69), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 232 AVLEGATQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVM-----NKAPWMV 279
A L GA +PG P+ PE + ++ R V +++A G + + NK P ++
Sbjct: 56 AQLNGAAEPGAAPPQLPEALLLQRRRVTVRKADAGGLGISIKGGRENKMPILI 108
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,024,759
Number of Sequences: 539616
Number of extensions: 4265093
Number of successful extensions: 9042
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 9040
Number of HSP's gapped (non-prelim): 9
length of query: 292
length of database: 191,569,459
effective HSP length: 116
effective length of query: 176
effective length of database: 128,974,003
effective search space: 22699424528
effective search space used: 22699424528
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)