BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022757
(292 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CFS|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
Phosphatase
pdb|2CFT|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
Phosphatase With Its Substrate
Length = 298
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 133/274 (48%), Gaps = 20/274 (7%)
Query: 19 IIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIXXX 77
++W G++ + G PE L+ L GK +FV+NNS ++R + +F LG + E++
Sbjct: 31 VLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSS 90
Query: 78 XXXXXXYLKS-IDFPKDK--KVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLM 134
L+ + P D V+V+G +G+ EL AG + G P G
Sbjct: 91 ALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAA-------- 142
Query: 135 EHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSM 194
V AV+VG+D +F++ K++ +R +P CL +AT+RD L+D G GS+
Sbjct: 143 ---PRVRAVLVGYDEHFSFAKLREACAHLR-DPECLLVATDRDPWHPLSDGSRTPGTGSL 198
Query: 195 VGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXX 254
A ++ R+ LVVGKPS +M + + F I ++ MVGDRL+TDILFG G
Sbjct: 199 AAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVL 258
Query: 255 XXXXXXXXXXXQ----SPNNSIQPDFYTNKISDF 284
Q + + + P +Y I+D
Sbjct: 259 TLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADL 292
>pdb|2OYC|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
pdb|2P27|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
With Mg2+ At 1.9 A Resolution
pdb|2P69|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
With Plp
Length = 306
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 20/274 (7%)
Query: 19 IIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIXXX 77
++W G++ + G PE L+ L GK +FV+NNS ++R + +F LG + E++
Sbjct: 31 VLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSS 90
Query: 78 XXXXXXYLKS-IDFPKDK--KVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLM 134
L+ + P D V+V+G +G+ EL AG + G P G
Sbjct: 91 ALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAA-------- 142
Query: 135 EHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSM 194
V AV+VG+D +F++ K++ +R +P CL +AT+RD L+D G GS+
Sbjct: 143 ---PRVRAVLVGYDEHFSFAKLREACAHLR-DPECLLVATDRDPWHPLSDGSRTPGTGSL 198
Query: 195 VGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXX 254
A ++ R+ LVVGKPS + + + F I ++ VGDRL+TDILFG G
Sbjct: 199 AAAVETASGRQALVVGKPSPYXFECITENFSIDPARTLXVGDRLETDILFGHRCGXTTVL 258
Query: 255 XXXXXXXXXXXQ----SPNNSIQPDFYTNKISDF 284
Q + + + P +Y I+D
Sbjct: 259 TLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADL 292
>pdb|2CFR|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
Phosphatase
Length = 298
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 20/274 (7%)
Query: 19 IIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIXXX 77
++W G++ + G PE L+ L GK +FV+NNS ++R + +F LG + E++
Sbjct: 31 VLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSS 90
Query: 78 XXXXXXYLKS-IDFPKDK--KVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLM 134
L+ + P D V+V+G +G+ EL AG + G P G
Sbjct: 91 ALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAA-------- 142
Query: 135 EHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSM 194
V AV+VG+D +F++ K++ +R +P CL +AT+RD L+D G GS+
Sbjct: 143 ---PRVRAVLVGYDEHFSFAKLREACAHLR-DPECLLVATDRDPWHPLSDGSRTPGTGSL 198
Query: 195 VGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXX 254
A ++ R+ LVVGKPS + + + F I ++ VGDRL+TDILFG G
Sbjct: 199 AAAVETASGRQALVVGKPSPYXFECITENFSIDPARTLXVGDRLETDILFGHRCGXTTVL 258
Query: 255 XXXXXXXXXXXQ----SPNNSIQPDFYTNKISDF 284
Q + + + P +Y I+D
Sbjct: 259 TLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADL 292
>pdb|1ZJJ|A Chain A, Crystal Structure Of Hypothetical Protein Ph1952 From
Pyrococcus Horikoshii Ot3
pdb|1ZJJ|B Chain B, Crystal Structure Of Hypothetical Protein Ph1952 From
Pyrococcus Horikoshii Ot3
Length = 263
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 125/234 (53%), Gaps = 20/234 (8%)
Query: 19 IIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXX 78
++++G++ I GV E ++ L+ +G F+TNNSTK+ + Y +K +G+ V+ I
Sbjct: 11 VLYRGNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSG 70
Query: 79 XXXXXYL-KSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHD 137
Y+ K +D K++V+G +G++KE++ G+ + E + G
Sbjct: 71 LATRLYMSKHLD---PGKIFVIGGEGLVKEMQALGWGIV-------TLDEARQGSW---- 116
Query: 138 KDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA 197
K+V VVVG D Y K++Y TL IR G FI TN DA T + + G GS++ A
Sbjct: 117 KEVKHVVVGLDPDLTYEKLKYATLAIRN--GATFIGTNPDA-TLPGEEGIYPGAGSIIAA 173
Query: 198 FVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCK 251
+T EP+++GKP+ M + + F ++ MVGDRLDTDI F + G K
Sbjct: 174 LKVATNVEPIIIGKPNEPMYEVVREMF--PGEELWMVGDRLDTDIAFAKKFGMK 225
>pdb|3PDW|A Chain A, Crystal Structure Of Putative P-Nitrophenyl Phosphatase
From Bacillus Subtilis
Length = 266
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 107/230 (46%), Gaps = 25/230 (10%)
Query: 20 IWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXX 79
++ G + I+ E + L+ +G +FVTNNS+++ KQ K + + TEE++
Sbjct: 17 MYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTTSM 76
Query: 80 XXXXYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKD 139
++ KD VYV+GE+GI + +E G + GG+ +
Sbjct: 77 ATAQHIAQ--QKKDASVYVIGEEGIRQAIEENGLTF------GGENADF----------- 117
Query: 140 VGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFV 199
VVVG DR Y K G L IR G FI+TN D + T+ G GS+
Sbjct: 118 ---VVVGIDRSITYEKFAVGCLAIRN--GARFISTNGD-IAIPTERGLLPGNGSLTSVLT 171
Query: 200 GSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGG 249
ST +P+ +GKP + +M+ G S+ MVGD TDI+ G N G
Sbjct: 172 VSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAG 221
>pdb|3QGM|A Chain A, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|B Chain B, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|C Chain C, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|D Chain D, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
Length = 268
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 32/266 (12%)
Query: 25 KLIDGVPETLD---MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXX 81
K + +PE ++ L+ GK+++FV+NNST+SR+ ++ + GL V E+EI
Sbjct: 21 KSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILVATYAT 80
Query: 82 XXYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVG 141
++ + P + KV+ GE+G+++EL LAG + ++++D +
Sbjct: 81 ARFIAR-EKP-NAKVFTTGEEGLIEELRLAGLE------------------IVDYD-EAE 119
Query: 142 AVVVGFDRYFNY-YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVG 200
+VVG +R N+ + C+R G +IATN D + D G G ++GA
Sbjct: 120 YLVVGSNRKINFELXTKALRACLR---GIRYIATNPDRIFPAEDGP-IPGTGXIIGALYW 175
Query: 201 STQREP-LVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXXX 259
T REP +VVGKPS + + G+ + +VGD++D D+ G+ G +
Sbjct: 176 XTGREPDVVVGKPSEVIXREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGV 235
Query: 260 XXXXXXQS--PNNSIQPDFYTNKISD 283
+ ++PD+ N + D
Sbjct: 236 TTRENLDQXIERHGLKPDYVFNSLKD 261
>pdb|1YV9|A Chain A, Crystal Structure Of A Had-Like Phosphatase From
Enterococcus Faecalis V583
pdb|1YV9|B Chain B, Crystal Structure Of A Had-Like Phosphatase From
Enterococcus Faecalis V583
Length = 264
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 110/231 (47%), Gaps = 27/231 (11%)
Query: 20 IWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEEEIXXXX 78
I+ G + I ++ L+ K +FVTNN+TKS + ++ + V +
Sbjct: 16 IYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTAT 75
Query: 79 XXXXXYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDK 138
Y+K + + KKV+V+GE G++ + AGF++ E P +
Sbjct: 76 LATIDYMKEAN--RGKKVFVIGEAGLIDLILEAGFEW----------DETNPDY------ 117
Query: 139 DVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAF 198
VVVG D +Y KV TL I++ G LFI TN D T+ G GS+V
Sbjct: 118 ----VVVGLDTELSYEKVVLATLAIQK--GALFIGTNPDKNIP-TERGLLPGAGSVVTFV 170
Query: 199 VGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFG-QNG 248
+TQ +P+ +GKP +M+ G++K Q+ MVGD +TDI G QNG
Sbjct: 171 ETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNG 221
>pdb|3EPR|A Chain A, Crystal Structure Of Putative Had Superfamily Hydrolase
From Streptococcus Agalactiae
Length = 264
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 20 IWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXX 79
I+KG I ++ L+ KG + VTNN+T++ + + + E I
Sbjct: 16 IYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATM 75
Query: 80 XXXXYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKD 139
Y+ D + K YV+GE+G+ K + AG+ +E K+
Sbjct: 76 ATVDYMN--DMNRGKTAYVIGEEGLKKAIADAGY--------------------VEDTKN 113
Query: 140 VGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFV 199
VVVG D Y K+ TL I+ G LFI TN D + T+ G GS+
Sbjct: 114 PAYVVVGLDWNVTYDKLATATLAIQN--GALFIGTNPD-LNIPTERGLLPGAGSLNALLE 170
Query: 200 GSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQN 247
+T+ +P+ +GKP+ +M+ I ++Q MVGD TDI+ G N
Sbjct: 171 AATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGIN 218
>pdb|1VJR|A Chain A, Crystal Structure Of 4-nitrophenylphosphatase (tm1742)
From Thermotoga Maritima At 2.40 A Resolution
Length = 271
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 30/232 (12%)
Query: 21 WKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXX 80
+ D L+ G E L+ L+ K KR VF TNNS+ + Y +K G
Sbjct: 29 YLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNXG-------------- 74
Query: 81 XXXYLKSIDFPKDKKVYV--VGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDK 138
+D P D V + + LK LG P+ KK+ G +++ ++
Sbjct: 75 -------VDVPDDAVVTSGEITAEHXLKRFGRCRIFLLGTPQ--LKKVFEAYGHVID-EE 124
Query: 139 DVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAF 198
+ VV+GFD+ Y +++ + +R+ G +IAT+ D + + GS+ A
Sbjct: 125 NPDFVVLGFDKTLTYERLKKACILLRK--GKFYIATHPD-INCPSKEGPVPDAGSIXAAI 181
Query: 199 VGSTQREP-LVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGG 249
ST R+P L+ GKP+ ++D ++ KFG+ K + VGDRL TD+ G+N G
Sbjct: 182 EASTGRKPDLIAGKPNPLVVDVISEKFGVPKERXAXVGDRLYTDVKLGKNAG 233
>pdb|1PW5|A Chain A, Putative Nagd Protein
Length = 253
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 26/230 (11%)
Query: 21 WKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXX 80
+ D L+ G E L+ L+ K KR VF TNNS+ + Y +K G+ V ++ +
Sbjct: 17 YLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNXGVDVPDDAVVTSGE- 75
Query: 81 XXXYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDV 140
+ + LK LG P+ KK+ G +++ +++
Sbjct: 76 ------------------ITAEHXLKRFGRCRIFLLGTPQ--LKKVFEAYGHVID-EENP 114
Query: 141 GAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVG 200
VV+GFD+ Y +++ + +R+ G +IAT+ D + + GS+ A
Sbjct: 115 DFVVLGFDKTLTYERLKKACILLRK--GKFYIATHPD-INCPSKEGPVPDAGSIXAAIEA 171
Query: 201 STQREP-LVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGG 249
ST R+P L+ GKP+ ++D ++ KFG+ K + VGDRL TD+ G+N G
Sbjct: 172 STGRKPDLIAGKPNPLVVDVISEKFGVPKERXAXVGDRLYTDVKLGKNAG 221
>pdb|1WVI|A Chain A, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
pdb|1WVI|B Chain B, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
pdb|1WVI|C Chain C, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
pdb|1WVI|D Chain D, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
Length = 257
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 28/266 (10%)
Query: 20 IWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEEEIXXXX 78
I+KG I + + L+ + + VTNN+T++ + + T + E I
Sbjct: 14 IYKGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKTPLETIYTAT 73
Query: 79 XXXXXYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDK 138
Y+ D + K YV+GE G+ K + AG++ E +
Sbjct: 74 LATIDYMN--DMKRGKTAYVIGETGLKKAVAEAGYR--------------------EDSE 111
Query: 139 DVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAF 198
+ VVVG D Y K+ TL I++ G +FI TN D + T+ G G+++
Sbjct: 112 NPAYVVVGLDTNLTYEKLTLATLAIQK--GAVFIGTNPD-LNIPTERGLLPGAGAILFLL 168
Query: 199 VGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXX 258
+T+ +P+++GKP +M+ ++ G+++ + MVGD TDI G
Sbjct: 169 EKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDI--ATLLVT 226
Query: 259 XXXXXXXQSPNNSIQPDFYTNKISDF 284
+ P IQPDF + ++++
Sbjct: 227 TGFTKPEEVPALPIQPDFVLSSLAEW 252
>pdb|1YS9|A Chain A, Crystal Sructure Of Phosphatase Spy1043 From Streptococcus
Pyogenes
Length = 254
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 111/267 (41%), Gaps = 30/267 (11%)
Query: 20 IWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEEEIXXXX 78
I++G I + L+ +G + VTNN+T++ + + + E I
Sbjct: 14 IYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQSMLANQFHVETSIETIYTAT 73
Query: 79 XXXXXYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDK 138
Y+ D + K YV+GE G+ + AG+ +E +
Sbjct: 74 MATVDYMN--DMNRGKTAYVIGETGLKSAIAAAGY--------------------VEELE 111
Query: 139 DVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAF 198
+ VVVG D Y + TL I++ G LFI TN D + T+ G G++
Sbjct: 112 NPAYVVVGLDSQVTYEMLAIATLAIQK--GALFIGTNPD-LNIPTERGLMPGAGALNALL 168
Query: 199 VGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFG-QNGGCKXXXXXX 257
+T+ +P+ +GKP+ +M+ GIQ+S+ MVGD TDI+ G QN
Sbjct: 169 EAATRVKPVFIGKPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDIMAGIQN---DIATILV 225
Query: 258 XXXXXXXXQSPNNSIQPDFYTNKISDF 284
+ P IQPD + + ++
Sbjct: 226 TTGFTRPEEVPTLPIQPDHVLSSLDEW 252
>pdb|1YDF|A Chain A, Crystal Structure Of A Had-like Phosphatase From
Streptococcus Pneumoniae
Length = 257
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 26/232 (11%)
Query: 20 IWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGLTVTEEEIXXXX 78
I+KG I + L+ + +FVTNN+T++ + + + + +
Sbjct: 14 IYKGKDRIPAGETFVHELQKRDIPYLFVTNNTTRTPESVKEMLAQNFNIDTPLSTVYTAT 73
Query: 79 XXXXXYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDK 138
Y+ D +K VYVVGE G+ + ++ AG+ ED + KP +
Sbjct: 74 LATIDYMN--DLGLEKTVYVVGEAGLKEAIKAAGYV-----ED-----KEKPAY------ 115
Query: 139 DVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAF 198
VVVG D +Y K TL I++ G FI TN D + T+ G GS++
Sbjct: 116 ----VVVGLDWQVDYEKFATATLAIQK--GAHFIGTNPD-LNIPTERGLLPGAGSLITLL 168
Query: 199 VGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGC 250
+T+ +P+ +GKP+ +MD G+++ ++ MVGD TDI G + G
Sbjct: 169 EVATRVKPVYIGKPNAIIMDKAVEHLGLEREELIMVGDNYLTDIRAGIDNGI 220
>pdb|2C4N|A Chain A, Nagd From E.Coli K-12 Strain
Length = 250
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 29/225 (12%)
Query: 27 IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXXXXYLK 86
+ G E L + KG LV +TN +++ + +F T G+ V + +L+
Sbjct: 21 VPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLR 80
Query: 87 SIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVG 146
+ KK YVVGE ++ EL AGF ++ P F V+VG
Sbjct: 81 R---QEGKKAYVVGEGALIHELYKAGFTI----------TDVNPDF----------VIVG 117
Query: 147 FDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREP 206
R +N+ + + G FIATN D TH + G++ + R+P
Sbjct: 118 ETRSYNWDMMHKAAYFVAN--GARFIATNPD--TH--GRGFYPACGALCAGIEKISGRKP 171
Query: 207 LVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCK 251
VGKPS +++ NK + +VGD L TDIL G G +
Sbjct: 172 FYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLE 216
>pdb|2HX1|A Chain A, Crystal Structure Of Possible Sugar Phosphatase, Had
Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii
Atcc 33406 At 2.10 A Resolution
pdb|2HX1|B Chain B, Crystal Structure Of Possible Sugar Phosphatase, Had
Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii
Atcc 33406 At 2.10 A Resolution
pdb|2HX1|C Chain C, Crystal Structure Of Possible Sugar Phosphatase, Had
Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii
Atcc 33406 At 2.10 A Resolution
pdb|2HX1|D Chain D, Crystal Structure Of Possible Sugar Phosphatase, Had
Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii
Atcc 33406 At 2.10 A Resolution
Length = 284
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 20/230 (8%)
Query: 26 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL-TVTEEEIXXXXXXXXXY 84
L+ G+ T D L+++G+ VTN++++S +Q + LGL ++T ++I Y
Sbjct: 31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIISSGXITKEY 90
Query: 85 LKSIDFPKDKKVYVVGEDGILKELELA-GFQYLGGPEDGGKKIELKPGFLMEHDKDVGAV 143
+ D KV + GI+ L A YL DG K + + + +V A+
Sbjct: 91 I-------DLKV----DGGIVAYLGTANSANYL--VSDGIKXLPVS-AIDDSNIGEVNAL 136
Query: 144 VVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQ 203
V+ D FN++ T+ + I N D LT G +
Sbjct: 137 VLLDDEGFNWFHDLNKTVNLLRKRTIPAIVANTDNTYPLTKTDVAIAIGGVATXIESILG 196
Query: 204 REPLVVGKPST----FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGG 249
R + GKP + F D L K I K +I VGD L TDIL G G
Sbjct: 197 RRFIRFGKPDSQXFXFAYDXLRQKXEISKREILXVGDTLHTDILGGNKFG 246
>pdb|2W4M|A Chain A, The Crystal Structure Of Human N-Acetylneuraminic Acid
Phosphatase, Nanp
Length = 270
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 170 LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKS 229
L + TN D T + A VG QRE KP+ + Y N G+Q
Sbjct: 149 LLLLTNGDRQTQREKIEACACQSYFDAVVVGGEQREE----KPAPSIFYYCCNLLGVQPG 204
Query: 230 QICMVGDRLDTDILFGQNGGCK 251
MVGD L+TDI G N G K
Sbjct: 205 DCVMVGDTLETDIQGGLNAGLK 226
>pdb|2HO4|A Chain A, Crystal Structure Of Protein From Mouse Mm.236127
pdb|2HO4|B Chain B, Crystal Structure Of Protein From Mouse Mm.236127
Length = 259
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 86/228 (37%), Gaps = 34/228 (14%)
Query: 24 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXXXX 83
D + G E L LR+ + FVTN + +++K ++ + L ++E+EI
Sbjct: 22 DAAVPGAQEALKRLRATSVXVRFVTNTTKETKKDLLERLKKLEFEISEDEIFTSLTAARN 81
Query: 84 YLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAV 143
++ K + ++ +D L P F +D AV
Sbjct: 82 LIEQ----KQVRPXLLLDDRAL------------------------PEFTGVQTQDPNAV 113
Query: 144 VVGF-DRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGST 202
V+G +F+Y + + + G IA ++ D G G V A +T
Sbjct: 114 VIGLAPEHFHYQLLNQAFRLLLD--GAPLIAIHKARYYKRKDGLAL-GPGPFVTALEYAT 170
Query: 203 QREPLVVGKPS-TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGG 249
+ VVGKP TF ++ L + + +GD D+ QN G
Sbjct: 171 DTKAXVVGKPEKTFFLEALRDA-DCAPEEAVXIGDDCRDDVDGAQNIG 217
>pdb|3HLT|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like
Hydrolase Domain Containing 2 (Hdhd2)
pdb|3HLT|C Chain C, The Crystal Structure Of Human Haloacid Dehalogenase-Like
Hydrolase Domain Containing 2 (Hdhd2)
Length = 266
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 85/228 (37%), Gaps = 34/228 (14%)
Query: 24 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXXXX 83
D + G E L LR + FVTN + +S++ ++ L ++E+EI
Sbjct: 22 DAAVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERLRKLEFDISEDEIFTSLTAARS 81
Query: 84 YLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAV 143
L+ K + ++ +D L P F D AV
Sbjct: 82 LLER----KQVRPMLLVDDRAL------------------------PDFKGIQTSDPNAV 113
Query: 144 VVGF-DRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGST 202
V+G +F+Y + + + G IA ++ D G G V A +T
Sbjct: 114 VMGLAPEHFHYQILNQAFRLLLD--GAPLIAIHKARYYKRKDGLAL-GPGPFVTALEYAT 170
Query: 203 QREPLVVGKPS-TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGG 249
+ VVGKP TF ++ L G + + M+GD D+ Q+ G
Sbjct: 171 DTKATVVGKPEKTFFLEALRGT-GCEPEEAVMIGDDCRDDVGGAQDVG 217
>pdb|2GFH|A Chain A, Crystal Structure Of A N-acetylneuraminic Acid Phosphatase
(nanp) From Mus Musculus At 1.90 A Resolution
Length = 260
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 170 LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKS 229
L + TN D T + A +G Q+E KP+ + + + G+Q
Sbjct: 139 LLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEE----KPAPSIFYHCCDLLGVQPG 194
Query: 230 QICMVGDRLDTDILFGQNGGCK 251
MVGD L+TDI G N G K
Sbjct: 195 DCVMVGDTLETDIQGGLNAGLK 216
>pdb|3IB6|A Chain A, Crystal Structure Of An Uncharacterized Protein From
Listeria Monocytogenes Serotype 4b
pdb|3IB6|B Chain B, Crystal Structure Of An Uncharacterized Protein From
Listeria Monocytogenes Serotype 4b
pdb|3IB6|C Chain C, Crystal Structure Of An Uncharacterized Protein From
Listeria Monocytogenes Serotype 4b
pdb|3IB6|D Chain D, Crystal Structure Of An Uncharacterized Protein From
Listeria Monocytogenes Serotype 4b
Length = 189
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 198 FVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGC 250
+ +++ +P + KP + D+ N I K++ MVG+ ++DI+ G
Sbjct: 84 YASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGI 136
>pdb|2X4D|A Chain A, Crystal Structure Of Human Phospholysine Phosphohistidine
Inorganic Pyrophosphate Phosphatase Lhpp
pdb|2X4D|B Chain B, Crystal Structure Of Human Phospholysine Phosphohistidine
Inorganic Pyrophosphate Phosphatase Lhpp
Length = 271
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 32 ETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXXXXYLKSIDFP 91
E + L+ ++ F TN S SR + + + LG ++E+E+ LK
Sbjct: 39 EAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDISEQEVTAPAPAACQILKE---- 94
Query: 92 KDKKVYVVGEDGILKELE 109
+ + Y++ DG+ E +
Sbjct: 95 RGLRPYLLIHDGVRSEFD 112
>pdb|2HSZ|A Chain A, Crystal Structure Of A Predicted Phosphoglycolate
Phosphatase (hs_0176) From Haemophilus Somnus 129pt At
1.90 A Resolution
pdb|2HSZ|B Chain B, Crystal Structure Of A Predicted Phosphoglycolate
Phosphatase (hs_0176) From Haemophilus Somnus 129pt At
1.90 A Resolution
Length = 243
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 203 QREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGC 250
Q P + P+ F YL KFG+ QI VGD DI + GC
Sbjct: 164 QSLPEIKPHPAPFY--YLCGKFGLYPKQILFVGDS-QNDIFAAHSAGC 208
>pdb|2GO7|A Chain A, Crystal Structure Of A Hydrolase From Haloacid
Dehalogenase-Like Family (Sp_2064) From Streptococcus
Pneumoniae Tigr4 At 2.10 A Resolution
pdb|2GO7|B Chain B, Crystal Structure Of A Hydrolase From Haloacid
Dehalogenase-Like Family (Sp_2064) From Streptococcus
Pneumoniae Tigr4 At 2.10 A Resolution
pdb|2GO7|C Chain C, Crystal Structure Of A Hydrolase From Haloacid
Dehalogenase-Like Family (Sp_2064) From Streptococcus
Pneumoniae Tigr4 At 2.10 A Resolution
pdb|2GO7|D Chain D, Crystal Structure Of A Hydrolase From Haloacid
Dehalogenase-Like Family (Sp_2064) From Streptococcus
Pneumoniae Tigr4 At 2.10 A Resolution
Length = 207
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 209 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCK 251
V KPS YL +K+ + +GDR D+ F QN G +
Sbjct: 138 VRKPSPEAATYLLDKYQLNSDNTYYIGDRT-LDVEFAQNSGIQ 179
>pdb|3L8E|A Chain A, Crystal Structure Of Apo Form Of D,D-Heptose 1.7-
Bisphosphate Phosphatase From E. Coli
pdb|3L8E|B Chain B, Crystal Structure Of Apo Form Of D,D-Heptose 1.7-
Bisphosphate Phosphatase From E. Coli
Length = 187
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 25 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGK-KFETL 65
+ IDGV + + L+ G LV VTN S +R ++ + +FETL
Sbjct: 30 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETL 71
>pdb|2GMW|A Chain A, Crystal Structure Of D,D-Heptose 1.7-Bisphosphate
Phosphatase From E. Coli.
pdb|2GMW|B Chain B, Crystal Structure Of D,D-Heptose 1.7-Bisphosphate
Phosphatase From E. Coli.
pdb|3ESQ|A Chain A, Crystal Structure Of Calcium-Bound D,D-Heptose
1.7-Bisphosphate Phosphatase From E. Coli
pdb|3ESR|A Chain A, Crystal Structure Of D,D-Heptose1.7-Bisphosphate
Phosphatase From E. Coli In Complex With Calcium And
Phosphate
pdb|3L1U|A Chain A, Crystal Structure Of Calcium-Bound Gmhb From E. Coli.
pdb|3L1U|B Chain B, Crystal Structure Of Calcium-Bound Gmhb From E. Coli.
pdb|3L1V|A Chain A, Crystal Structure Of Gmhb From E. Coli In Complex With
Calcium And Phosphate.
pdb|3L1V|B Chain B, Crystal Structure Of Gmhb From E. Coli In Complex With
Calcium And Phosphate
Length = 211
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 25 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGK-KFETL 65
+ IDGV + + L+ G LV VTN S +R ++ + +FETL
Sbjct: 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETL 91
>pdb|3Q3Q|A Chain A, Crystal Structure Of Spap: An Novel Alkaline Phosphatase
From Bacterium Sphingomonas Sp. Strain Bsar-1
Length = 565
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 218 DYLANKFGIQKSQICMVGDRLDTDI 242
DY+ + FG + ++ C+ DRLDT++
Sbjct: 300 DYVGHTFGTEGTESCIQVDRLDTEL 324
>pdb|3VI6|A Chain A, Crystal Structure Of Human L30e
Length = 125
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 19 IIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 68
++ K K + G +TL M+R +LV + NN RK + + L T
Sbjct: 21 LVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKT 70
>pdb|2ZKR|6 Chain 6, Structure Of A Mammalian Ribosomal 60s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
Length = 115
Score = 28.1 bits (61), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 19 IIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 68
++ K K + G +TL M+R +LV + NN RK + + L T
Sbjct: 20 LVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKT 69
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.140 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,191,621
Number of Sequences: 62578
Number of extensions: 340720
Number of successful extensions: 728
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 666
Number of HSP's gapped (non-prelim): 34
length of query: 292
length of database: 14,973,337
effective HSP length: 98
effective length of query: 194
effective length of database: 8,840,693
effective search space: 1715094442
effective search space used: 1715094442
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)