Query 022765
Match_columns 292
No_of_seqs 160 out of 249
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 10:45:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022765.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022765hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b4t_P 26S proteasome regulato 100.0 3.3E-42 1.1E-46 336.6 19.2 229 56-290 95-328 (445)
2 4b4t_R RPN7, 26S proteasome re 99.6 9.2E-17 3.1E-21 155.7 5.3 159 85-256 120-278 (429)
3 4b4t_Q 26S proteasome regulato 99.4 2.7E-12 9.1E-17 118.1 17.5 209 57-270 96-309 (434)
4 4b4t_O 26S proteasome regulato 99.2 5.4E-11 1.8E-15 114.5 12.9 182 102-288 82-274 (393)
5 3txn_A 26S proteasome regulato 98.8 7.2E-07 2.5E-11 86.3 22.1 253 19-288 20-282 (394)
6 4b4t_S RPN3, 26S proteasome re 98.6 4.9E-08 1.7E-12 97.6 7.2 145 131-290 225-370 (523)
7 3nf1_A KLC 1, kinesin light ch 97.0 0.069 2.4E-06 45.2 18.2 190 14-206 23-224 (311)
8 3ro3_A PINS homolog, G-protein 96.8 0.026 9E-07 42.5 12.3 112 93-206 6-118 (164)
9 3ro3_A PINS homolog, G-protein 96.7 0.06 2.1E-06 40.4 13.5 112 93-205 46-157 (164)
10 3u3w_A Transcriptional activat 96.6 0.11 3.7E-06 45.4 16.5 178 20-201 77-261 (293)
11 3ro2_A PINS homolog, G-protein 96.5 0.29 9.9E-06 41.2 18.0 113 93-206 180-292 (338)
12 3ro2_A PINS homolog, G-protein 96.4 0.15 5.2E-06 43.0 15.4 111 94-206 221-332 (338)
13 3sf4_A G-protein-signaling mod 96.4 0.41 1.4E-05 42.1 18.7 111 94-206 225-336 (406)
14 4a1s_A PINS, partner of inscut 96.4 0.28 9.7E-06 43.8 17.9 113 93-206 220-332 (411)
15 1elr_A TPR2A-domain of HOP; HO 96.2 0.079 2.7E-06 38.7 11.3 104 95-206 3-108 (131)
16 4a1s_A PINS, partner of inscut 96.1 0.23 7.8E-06 44.4 16.0 133 70-206 239-372 (411)
17 3sf4_A G-protein-signaling mod 96.1 0.65 2.2E-05 40.7 20.6 113 93-206 184-296 (406)
18 3gw4_A Uncharacterized protein 96.1 0.39 1.3E-05 38.1 17.9 133 70-206 42-176 (203)
19 2qfc_A PLCR protein; TPR, HTH, 96.0 0.29 1E-05 42.6 15.7 131 69-203 130-262 (293)
20 3edt_B KLC 2, kinesin light ch 95.9 0.61 2.1E-05 38.4 17.5 134 70-204 101-279 (283)
21 2dba_A Smooth muscle cell asso 95.8 0.17 5.9E-06 38.0 11.7 104 93-206 25-128 (148)
22 3mkr_A Coatomer subunit epsilo 95.6 1.1 3.9E-05 39.5 19.0 95 96-206 101-195 (291)
23 4b4t_Q 26S proteasome regulato 95.5 0.023 7.9E-07 51.5 6.7 111 95-206 94-204 (434)
24 3edt_B KLC 2, kinesin light ch 95.5 0.13 4.5E-06 42.5 10.8 112 94-206 41-156 (283)
25 2qfc_A PLCR protein; TPR, HTH, 95.5 0.69 2.4E-05 40.2 15.9 138 65-206 86-225 (293)
26 4ga2_A E3 SUMO-protein ligase 95.5 0.059 2E-06 42.9 8.3 93 101-206 2-94 (150)
27 3gw4_A Uncharacterized protein 95.4 0.38 1.3E-05 38.2 13.1 111 95-206 25-136 (203)
28 3nf1_A KLC 1, kinesin light ch 95.4 0.099 3.4E-06 44.2 9.9 113 94-206 25-140 (311)
29 2vyi_A SGTA protein; chaperone 95.2 0.27 9.4E-06 35.5 10.7 101 92-206 8-109 (131)
30 2ho1_A Type 4 fimbrial biogene 95.2 1.1 3.7E-05 36.9 17.6 168 18-206 37-204 (252)
31 2ifu_A Gamma-SNAP; membrane fu 95.0 0.28 9.7E-06 43.3 12.2 110 94-206 74-184 (307)
32 3as5_A MAMA; tetratricopeptide 95.0 0.89 3.1E-05 34.8 16.0 168 16-206 6-173 (186)
33 3ulq_A Response regulator aspa 95.0 1.9 6.5E-05 38.5 18.4 118 70-191 200-317 (383)
34 3uq3_A Heat shock protein STI1 94.9 1.3 4.4E-05 36.1 20.1 180 17-206 4-202 (258)
35 4i17_A Hypothetical protein; T 94.7 1 3.5E-05 37.0 14.2 102 98-206 44-146 (228)
36 2lni_A Stress-induced-phosphop 94.7 0.2 6.9E-06 36.7 8.8 95 98-206 18-113 (133)
37 3sz7_A HSC70 cochaperone (SGT) 94.7 0.46 1.6E-05 37.4 11.4 100 94-207 9-109 (164)
38 1elw_A TPR1-domain of HOP; HOP 94.6 0.52 1.8E-05 33.4 10.6 98 96-206 4-101 (118)
39 3upv_A Heat shock protein STI1 94.6 0.89 3E-05 33.8 12.4 98 96-207 4-102 (126)
40 4gco_A Protein STI-1; structur 94.5 0.68 2.3E-05 35.7 11.8 104 89-206 6-110 (126)
41 3u3w_A Transcriptional activat 94.4 1.3 4.5E-05 38.4 14.9 140 62-205 83-224 (293)
42 3uq3_A Heat shock protein STI1 94.3 0.81 2.8E-05 37.3 12.5 104 95-206 4-108 (258)
43 2ifu_A Gamma-SNAP; membrane fu 94.3 0.35 1.2E-05 42.7 10.9 108 94-204 114-222 (307)
44 2xev_A YBGF; tetratricopeptide 94.1 0.64 2.2E-05 34.3 10.6 100 100-206 6-105 (129)
45 4gcn_A Protein STI-1; structur 94.1 0.42 1.5E-05 36.8 9.8 103 95-205 7-111 (127)
46 1na0_A Designed protein CTPR3; 94.0 0.92 3.2E-05 32.3 11.0 98 96-206 9-106 (125)
47 3as5_A MAMA; tetratricopeptide 93.9 1.6 5.4E-05 33.3 12.8 99 95-206 7-105 (186)
48 1a17_A Serine/threonine protei 93.8 1.3 4.6E-05 33.6 12.2 98 95-206 12-110 (166)
49 2xpi_A Anaphase-promoting comp 93.8 2.9 0.0001 39.1 16.8 104 97-206 476-579 (597)
50 1qqe_A Vesicular transport pro 93.8 1 3.5E-05 39.3 12.9 111 94-206 75-187 (292)
51 4ga2_A E3 SUMO-protein ligase 93.7 0.16 5.6E-06 40.2 6.9 98 91-202 26-124 (150)
52 2e2e_A Formate-dependent nitri 93.7 0.76 2.6E-05 36.3 10.9 97 96-206 44-144 (177)
53 2l6j_A TPR repeat-containing p 93.6 0.34 1.2E-05 34.7 7.9 70 97-174 5-75 (111)
54 3ulq_A Response regulator aspa 93.6 3.9 0.00013 36.5 18.8 104 101-206 108-213 (383)
55 3q15_A PSP28, response regulat 93.4 4.1 0.00014 36.4 18.8 106 70-179 198-303 (378)
56 3n71_A Histone lysine methyltr 93.3 2.6 8.8E-05 41.2 16.0 137 66-205 321-463 (490)
57 3gyz_A Chaperone protein IPGC; 93.3 1.3 4.5E-05 35.8 11.9 120 74-206 9-133 (151)
58 2q7f_A YRRB protein; TPR, prot 93.3 2.7 9.2E-05 33.9 13.9 97 96-206 91-188 (243)
59 2xpi_A Anaphase-promoting comp 93.3 4.8 0.00016 37.6 17.3 103 97-206 442-545 (597)
60 2fbn_A 70 kDa peptidylprolyl i 93.2 1.4 4.6E-05 35.7 11.9 105 96-206 38-151 (198)
61 3qky_A Outer membrane assembly 93.2 0.69 2.4E-05 39.1 10.4 108 92-206 11-126 (261)
62 3mv2_B Coatomer subunit epsilo 93.2 0.26 8.9E-06 45.9 8.2 103 99-206 103-207 (310)
63 3q15_A PSP28, response regulat 93.1 0.66 2.3E-05 41.7 10.6 112 92-205 137-250 (378)
64 2fo7_A Synthetic consensus TPR 93.0 1 3.5E-05 32.3 9.8 97 97-206 36-132 (136)
65 3qky_A Outer membrane assembly 93.0 3.6 0.00012 34.5 14.8 107 96-206 52-177 (261)
66 2kck_A TPR repeat; tetratricop 92.8 0.18 6.2E-06 35.7 5.2 95 100-206 10-106 (112)
67 2vq2_A PILW, putative fimbrial 92.7 3.1 0.0001 33.0 17.3 168 18-206 8-176 (225)
68 1hh8_A P67PHOX, NCF-2, neutrop 92.6 0.78 2.7E-05 37.0 9.5 103 96-206 37-150 (213)
69 1qqe_A Vesicular transport pro 92.5 2.6 9E-05 36.7 13.5 105 100-206 41-147 (292)
70 3vtx_A MAMA; tetratricopeptide 92.3 1.3 4.3E-05 35.0 10.3 98 95-206 4-102 (184)
71 3q49_B STIP1 homology and U bo 92.3 1.1 3.8E-05 33.3 9.5 99 96-208 9-108 (137)
72 3hym_B Cell division cycle pro 92.3 4.6 0.00016 34.0 15.6 101 99-206 162-265 (330)
73 1a17_A Serine/threonine protei 92.3 1.3 4.6E-05 33.6 10.1 98 96-205 47-145 (166)
74 3sz7_A HSC70 cochaperone (SGT) 92.2 0.72 2.4E-05 36.2 8.6 83 96-186 45-128 (164)
75 2kat_A Uncharacterized protein 92.2 0.6 2.1E-05 34.4 7.7 66 96-169 19-85 (115)
76 1hh8_A P67PHOX, NCF-2, neutrop 92.0 2.7 9.1E-05 33.7 12.0 92 99-206 9-100 (213)
77 4eqf_A PEX5-related protein; a 91.9 5.8 0.0002 34.6 15.0 99 96-206 177-276 (365)
78 2xcb_A PCRH, regulatory protei 91.9 1.5 5E-05 33.8 9.9 101 93-206 15-115 (142)
79 1elr_A TPR2A-domain of HOP; HO 91.7 0.73 2.5E-05 33.3 7.6 72 96-168 38-110 (131)
80 1xnf_A Lipoprotein NLPI; TPR, 91.3 2.8 9.5E-05 34.6 11.7 97 95-205 42-139 (275)
81 1p5q_A FKBP52, FK506-binding p 91.1 0.79 2.7E-05 41.4 8.7 107 94-206 145-259 (336)
82 3fp2_A TPR repeat-containing p 90.9 6.9 0.00024 35.8 15.0 61 100-167 348-408 (537)
83 2q7f_A YRRB protein; TPR, prot 90.4 5.9 0.0002 31.8 15.4 97 96-206 125-222 (243)
84 2pl2_A Hypothetical conserved 90.4 5 0.00017 33.2 12.5 94 96-203 118-211 (217)
85 1hz4_A MALT regulatory protein 90.4 3.2 0.00011 36.6 11.8 111 93-206 11-122 (373)
86 2fo7_A Synthetic consensus TPR 90.3 3.6 0.00012 29.2 12.5 64 97-167 70-133 (136)
87 3hym_B Cell division cycle pro 90.2 7.5 0.00026 32.7 14.7 105 96-206 193-299 (330)
88 2ho1_A Type 4 fimbrial biogene 90.1 6.8 0.00023 32.0 16.5 99 95-206 140-238 (252)
89 2vyi_A SGTA protein; chaperone 89.8 1.2 4.1E-05 32.0 7.2 66 96-168 46-111 (131)
90 1hxi_A PEX5, peroxisome target 89.8 2.1 7.3E-05 32.4 9.0 94 100-206 21-114 (121)
91 1na3_A Designed protein CTPR2; 89.7 3.4 0.00012 28.1 9.3 70 131-206 3-72 (91)
92 3rkv_A Putative peptidylprolyl 89.6 6 0.0002 30.7 12.3 105 96-206 11-126 (162)
93 2vgx_A Chaperone SYCD; alterna 89.5 2.3 7.8E-05 33.5 9.2 100 93-206 18-118 (148)
94 2vq2_A PILW, putative fimbrial 89.3 6.8 0.00023 30.9 15.6 97 95-204 112-208 (225)
95 1ihg_A Cyclophilin 40; ppiase 89.2 4.9 0.00017 37.0 12.6 105 96-206 223-336 (370)
96 3cv0_A Peroxisome targeting si 89.1 2.3 8E-05 35.8 9.5 99 96-207 172-270 (327)
97 3ma5_A Tetratricopeptide repea 88.9 1.2 4.2E-05 32.5 6.7 70 96-173 7-77 (100)
98 4eqf_A PEX5-related protein; a 88.7 2.2 7.7E-05 37.3 9.5 100 96-208 213-312 (365)
99 2vsy_A XCC0866; transferase, g 88.7 4.1 0.00014 38.9 12.0 97 96-206 23-120 (568)
100 3ieg_A DNAJ homolog subfamily 88.7 10 0.00035 32.1 19.7 109 96-206 188-301 (359)
101 2y4t_A DNAJ homolog subfamily 88.7 13 0.00043 33.2 18.2 109 96-206 211-324 (450)
102 3qww_A SET and MYND domain-con 88.6 1.6 5.4E-05 42.0 9.0 114 54-169 298-414 (433)
103 2gw1_A Mitochondrial precursor 88.5 2.4 8.4E-05 38.4 9.8 100 92-205 233-332 (514)
104 1kt0_A FKBP51, 51 kDa FK506-bi 88.5 1.9 6.5E-05 40.8 9.4 107 94-206 266-380 (457)
105 2xev_A YBGF; tetratricopeptide 88.2 1 3.5E-05 33.1 5.9 68 97-169 40-108 (129)
106 3cv0_A Peroxisome targeting si 88.0 2.3 7.9E-05 35.9 8.8 100 96-203 206-312 (327)
107 3u4t_A TPR repeat-containing p 87.9 2.3 7.8E-05 35.3 8.6 98 98-205 39-136 (272)
108 4f3v_A ESX-1 secretion system 87.8 5.5 0.00019 36.4 11.7 103 91-205 97-199 (282)
109 3ieg_A DNAJ homolog subfamily 87.8 12 0.0004 31.7 21.2 99 99-206 237-335 (359)
110 4b4t_P 26S proteasome regulato 87.8 19 0.00064 34.4 16.0 90 116-205 116-205 (445)
111 2yhc_A BAMD, UPF0169 lipoprote 87.7 7.2 0.00025 32.2 11.6 105 97-206 42-176 (225)
112 3u4t_A TPR repeat-containing p 87.3 2.1 7.1E-05 35.5 8.0 97 99-206 6-103 (272)
113 3qwp_A SET and MYND domain-con 87.3 3 0.0001 39.8 10.0 112 56-169 289-403 (429)
114 2gw1_A Mitochondrial precursor 87.2 2.9 9.9E-05 37.9 9.5 97 96-206 6-102 (514)
115 2vsy_A XCC0866; transferase, g 87.2 8.2 0.00028 36.8 13.1 97 96-206 57-157 (568)
116 1xnf_A Lipoprotein NLPI; TPR, 87.1 3.2 0.00011 34.2 9.0 97 96-206 77-173 (275)
117 3q49_B STIP1 homology and U bo 87.0 2.9 9.8E-05 30.9 7.9 82 96-185 43-128 (137)
118 1fch_A Peroxisomal targeting s 86.9 14 0.00048 31.8 17.4 98 96-207 217-315 (368)
119 4abn_A Tetratricopeptide repea 86.7 6 0.00021 37.4 11.7 97 96-206 137-250 (474)
120 1na3_A Designed protein CTPR2; 86.7 2.3 7.9E-05 29.0 6.7 65 96-168 9-74 (91)
121 3mkr_A Coatomer subunit epsilo 86.6 16 0.00054 32.0 18.6 99 96-206 130-229 (291)
122 2kck_A TPR repeat; tetratricop 86.4 1.7 6E-05 30.3 6.1 68 96-169 40-109 (112)
123 3k9i_A BH0479 protein; putativ 86.4 1.4 4.9E-05 32.6 5.9 70 93-169 24-93 (117)
124 3qou_A Protein YBBN; thioredox 86.3 8.9 0.0003 33.3 11.9 63 97-167 118-181 (287)
125 1w3b_A UDP-N-acetylglucosamine 85.7 18 0.00061 31.8 14.6 94 99-205 172-265 (388)
126 2kc7_A BFR218_protein; tetratr 85.6 3.3 0.00011 29.1 7.3 63 100-169 4-67 (99)
127 3k9i_A BH0479 protein; putativ 85.5 4.2 0.00014 30.0 8.1 88 109-206 3-90 (117)
128 1p5q_A FKBP52, FK506-binding p 85.3 5.3 0.00018 35.9 10.1 96 95-204 195-292 (336)
129 2y4t_A DNAJ homolog subfamily 85.1 20 0.00069 31.8 18.0 97 101-206 262-358 (450)
130 3urz_A Uncharacterized protein 84.9 10 0.00036 30.9 11.1 94 100-206 8-117 (208)
131 2pl2_A Hypothetical conserved 84.6 16 0.00053 30.1 17.7 162 21-206 8-180 (217)
132 3upv_A Heat shock protein STI1 84.4 10 0.00034 27.8 9.9 66 135-206 2-67 (126)
133 2yhc_A BAMD, UPF0169 lipoprote 84.0 7.4 0.00025 32.2 9.8 68 98-169 149-216 (225)
134 2c2l_A CHIP, carboxy terminus 83.9 5.2 0.00018 34.8 9.2 137 97-250 5-148 (281)
135 2vgx_A Chaperone SYCD; alterna 83.7 9.4 0.00032 29.8 9.8 66 135-206 19-84 (148)
136 1na0_A Designed protein CTPR3; 83.3 6.1 0.00021 27.8 7.9 70 131-206 3-72 (125)
137 4abn_A Tetratricopeptide repea 83.3 12 0.00042 35.2 12.1 98 94-206 100-208 (474)
138 4gyw_A UDP-N-acetylglucosamine 83.0 24 0.00082 35.9 14.9 166 17-206 8-174 (723)
139 2r5s_A Uncharacterized protein 82.9 15 0.00053 28.8 13.0 62 100-168 10-71 (176)
140 4gco_A Protein STI-1; structur 82.3 3.9 0.00013 31.2 6.9 71 96-176 47-118 (126)
141 1elw_A TPR1-domain of HOP; HOP 82.1 10 0.00035 26.3 9.7 65 136-206 3-67 (118)
142 3rkv_A Putative peptidylprolyl 81.3 8.7 0.0003 29.7 8.7 72 135-206 9-92 (162)
143 2fbn_A 70 kDa peptidylprolyl i 81.1 15 0.0005 29.4 10.3 71 136-206 37-117 (198)
144 2if4_A ATFKBP42; FKBP-like, al 80.1 5.5 0.00019 35.9 8.1 106 95-206 178-293 (338)
145 1ihg_A Cyclophilin 40; ppiase 80.1 12 0.0004 34.5 10.5 71 91-169 268-339 (370)
146 2xcb_A PCRH, regulatory protei 79.1 18 0.00061 27.4 9.8 66 135-206 16-81 (142)
147 2lni_A Stress-induced-phosphop 79.0 15 0.00051 26.2 9.2 71 130-206 9-79 (133)
148 3mv2_B Coatomer subunit epsilo 78.2 42 0.0014 30.9 13.8 152 94-267 134-299 (310)
149 1w3b_A UDP-N-acetylglucosamine 77.7 36 0.0012 29.8 15.1 61 139-205 307-367 (388)
150 1hz4_A MALT regulatory protein 76.8 37 0.0013 29.6 22.7 171 70-262 190-360 (373)
151 3n71_A Histone lysine methyltr 76.5 20 0.0007 34.8 11.4 100 103-205 316-421 (490)
152 1fch_A Peroxisomal targeting s 76.2 36 0.0012 29.1 17.1 65 136-206 216-280 (368)
153 3vtx_A MAMA; tetratricopeptide 75.3 26 0.0009 27.1 15.8 98 96-206 73-170 (184)
154 4gyw_A UDP-N-acetylglucosamine 73.4 33 0.0011 34.9 12.5 97 96-206 43-140 (723)
155 4gcn_A Protein STI-1; structur 73.3 6.5 0.00022 29.8 5.7 70 97-167 43-113 (127)
156 3ma5_A Tetratricopeptide repea 73.3 23 0.00077 25.4 10.1 64 137-206 7-70 (100)
157 2l6j_A TPR repeat-containing p 72.9 21 0.00072 24.8 8.2 65 136-206 3-67 (111)
158 1wao_1 Serine/threonine protei 72.6 7.5 0.00026 37.0 7.1 94 96-201 40-134 (477)
159 2v5f_A Prolyl 4-hydroxylase su 72.4 11 0.00039 27.7 6.7 70 99-169 8-78 (104)
160 3ffl_A Anaphase-promoting comp 72.0 11 0.00039 32.0 7.3 68 138-205 21-91 (167)
161 3i5p_A Nucleoporin NUP170; hel 70.9 5.6 0.00019 39.6 5.9 73 176-254 216-308 (525)
162 4i17_A Hypothetical protein; T 70.2 41 0.0014 27.0 19.2 137 19-167 8-147 (228)
163 2kat_A Uncharacterized protein 70.1 26 0.00088 25.1 8.2 63 138-206 20-82 (115)
164 4g1t_A Interferon-induced prot 69.5 22 0.00074 32.0 9.2 110 96-206 51-167 (472)
165 1kt0_A FKBP51, 51 kDa FK506-bi 68.9 54 0.0019 30.6 12.1 71 136-206 267-346 (457)
166 2wm9_A Dedicator of cytokinesi 68.7 30 0.001 33.2 10.4 68 100-167 15-118 (428)
167 2kc7_A BFR218_protein; tetratr 68.4 26 0.0009 24.2 10.0 61 141-206 4-64 (99)
168 3urz_A Uncharacterized protein 67.3 48 0.0017 26.8 13.2 67 95-169 53-120 (208)
169 3qwp_A SET and MYND domain-con 66.6 58 0.002 30.7 11.9 97 106-205 297-399 (429)
170 2dba_A Smooth muscle cell asso 66.3 35 0.0012 24.8 11.6 70 134-206 25-94 (148)
171 3qou_A Protein YBBN; thioredox 65.6 65 0.0022 27.7 17.4 98 96-206 151-248 (287)
172 2e2e_A Formate-dependent nitri 65.3 44 0.0015 25.7 10.2 64 137-206 44-110 (177)
173 3fp2_A TPR repeat-containing p 64.0 84 0.0029 28.4 22.3 138 96-250 310-473 (537)
174 1wao_1 Serine/threonine protei 63.8 7.2 0.00025 37.2 4.9 92 101-206 11-103 (477)
175 2c2l_A CHIP, carboxy terminus 62.2 17 0.00058 31.5 6.7 65 96-168 38-103 (281)
176 1ouv_A Conserved hypothetical 61.9 29 0.001 28.8 8.0 28 138-165 75-106 (273)
177 3t5v_B Nuclear mRNA export pro 60.1 49 0.0017 32.1 10.2 168 109-289 139-323 (455)
178 1hxi_A PEX5, peroxisome target 59.5 40 0.0014 25.0 7.7 64 137-206 17-80 (121)
179 2v5f_A Prolyl 4-hydroxylase su 58.9 30 0.001 25.4 6.7 69 138-206 6-75 (104)
180 3txn_A 26S proteasome regulato 57.9 1.3E+02 0.0044 28.5 13.7 67 136-202 98-164 (394)
181 3gyz_A Chaperone protein IPGC; 57.2 37 0.0013 26.9 7.5 65 136-206 35-99 (151)
182 2ond_A Cleavage stimulation fa 53.8 26 0.00088 30.3 6.4 50 109-166 182-232 (308)
183 2yin_A DOCK2, dedicator of cyt 53.6 56 0.0019 31.4 9.2 76 92-167 31-122 (436)
184 2pzi_A Probable serine/threoni 51.1 34 0.0012 33.9 7.6 66 96-168 433-498 (681)
185 3ffl_A Anaphase-promoting comp 50.5 13 0.00046 31.6 3.8 32 95-126 121-152 (167)
186 3mkq_A Coatomer beta'-subunit; 49.9 1.2E+02 0.0042 29.3 11.2 85 106-206 662-752 (814)
187 1ouv_A Conserved hypothetical 49.3 87 0.003 25.8 8.8 90 100-206 78-179 (273)
188 3t5x_A PCI domain-containing p 48.6 45 0.0015 28.5 7.0 96 174-288 11-106 (203)
189 2pzi_A Probable serine/threoni 43.8 73 0.0025 31.5 8.6 92 107-206 402-496 (681)
190 2r5s_A Uncharacterized protein 41.7 1.2E+02 0.0041 23.4 11.9 102 91-206 35-137 (176)
191 1xi4_A Clathrin heavy chain; a 41.5 1.2E+02 0.0041 34.3 10.4 51 101-166 1200-1250(1630)
192 3qww_A SET and MYND domain-con 37.8 62 0.0021 30.8 6.8 95 108-205 310-410 (433)
193 2if4_A ATFKBP42; FKBP-like, al 36.6 68 0.0023 28.5 6.5 71 136-206 178-259 (338)
194 2ooe_A Cleavage stimulation fa 36.1 1.3E+02 0.0044 28.0 8.6 67 95-167 320-386 (530)
195 1b89_A Protein (clathrin heavy 36.0 41 0.0014 32.7 5.2 78 101-205 99-176 (449)
196 1pc2_A Mitochondria fission pr 35.1 1.9E+02 0.0064 23.8 9.0 68 97-169 33-103 (152)
197 2h6f_A Protein farnesyltransfe 35.0 2.3E+02 0.0077 26.0 10.0 26 95-120 96-121 (382)
198 4g1t_A Interferon-induced prot 33.3 2.6E+02 0.0087 24.8 10.6 64 140-206 337-401 (472)
199 2ond_A Cleavage stimulation fa 32.6 2.3E+02 0.0079 24.0 16.1 66 96-168 99-165 (308)
200 3rjv_A Putative SEL1 repeat pr 31.8 60 0.0021 26.4 5.0 66 96-166 85-158 (212)
201 3bqo_A Telomeric repeat-bindin 31.7 2.6E+02 0.009 24.5 9.1 107 35-142 42-162 (211)
202 2jpu_A ORF C02003 protein; sol 30.6 22 0.00076 29.0 1.9 27 134-160 4-30 (129)
203 2h56_A DNA-3-methyladenine gly 29.6 1.7E+02 0.0059 25.3 7.8 84 20-108 32-120 (233)
204 3mkq_B Coatomer subunit alpha; 29.6 2.6E+02 0.0087 23.6 11.0 125 107-259 16-152 (177)
205 4fjo_A DNA repair protein REV1 25.9 1.7E+02 0.0059 22.1 6.3 69 17-86 10-84 (97)
206 2xze_A STAM-binding protein; h 24.6 57 0.0019 26.7 3.5 33 136-168 39-71 (146)
207 2yg9_A DNA-3-methyladenine gly 24.6 1.2E+02 0.0043 26.1 5.9 84 20-108 41-128 (225)
208 3vu7_H DNA repair protein REV1 24.0 1.8E+02 0.0061 23.3 6.2 68 18-86 38-111 (124)
209 4f3v_A ESX-1 secretion system 23.9 3.9E+02 0.013 23.9 15.5 100 98-206 137-237 (282)
210 3bee_A Putative YFRE protein; 23.3 2.1E+02 0.0073 20.6 6.3 29 94-122 41-69 (93)
211 2k48_A Nucleoprotein; viral pr 23.2 1.2E+02 0.004 24.0 4.8 69 35-107 35-103 (107)
212 4afl_A P29ING4, inhibitor of g 22.6 2.5E+02 0.0084 21.1 6.7 21 56-76 4-24 (104)
213 4g26_A Pentatricopeptide repea 21.5 5.2E+02 0.018 24.5 14.6 173 20-206 28-204 (501)
214 2h6f_A Protein farnesyltransfe 21.0 1.7E+02 0.006 26.7 6.5 97 96-205 131-228 (382)
215 2ff4_A Probable regulatory pro 20.8 1.7E+02 0.0057 27.0 6.3 67 94-167 169-235 (388)
216 4g26_A Pentatricopeptide repea 20.7 4.6E+02 0.016 24.9 9.6 140 109-269 83-222 (501)
217 2wm9_A Dedicator of cytokinesi 20.6 84 0.0029 30.0 4.2 31 171-201 5-35 (428)
218 3i0w_A 8-oxoguanine-DNA-glycos 20.5 3.6E+02 0.012 24.1 8.3 120 34-169 113-253 (290)
219 1klx_A Cysteine rich protein B 20.4 1.3E+02 0.0045 22.8 4.7 60 98-166 59-126 (138)
No 1
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-42 Score=336.65 Aligned_cols=229 Identities=17% Similarity=0.213 Sum_probs=207.7
Q ss_pred HHHHHHHHHhcCCC--hHHHHHHHHHHHHhhcCcccchhHhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCCh
Q 022765 56 QLLQTFAQELGRLE--PETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDD 133 (292)
Q Consensus 56 ~~l~~~~~~l~~l~--~~~~~~~~~~~L~~i~~~~i~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~ 133 (292)
.++..++.++.+.| +...+...+.+|+.+++|+|++|.++++++..||++||.+|+|.+|+++|++|++||+ ++|++
T Consensus 95 ~~V~~~~~~l~~~~~~d~~~~~~~i~~l~~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~-~~~~~ 173 (445)
T 4b4t_P 95 YMIQKVMEYLKSSKSLDLNTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQVETY-GSMEM 173 (445)
T ss_dssp HHHHHHHHHHHHHCTTHHHHHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-SSSCH
T ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH-hcccH
Confidence 34444555565555 4456888899999999999999999999999999999999999999999999999997 69999
Q ss_pred HHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc-CchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhcC
Q 022765 134 TFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS-SQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIG 212 (292)
Q Consensus 134 ~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~-~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~~~~~~~ 212 (292)
.+|+++|++|+|+|++.+||++|+++++|++...+. ..+++++++|+.|++++++++++|++||++|++++.++.
T Consensus 174 ~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~---- 249 (445)
T 4b4t_P 174 SEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDA---- 249 (445)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhccc----
Confidence 999999999999999999999999999999988765 478999999999999999999999999999999999743
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhccccccCCCchhHHHHHHHhh-hcChhHH-HHHHhhcCCcccc
Q 022765 213 DETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLER-ILRKPEI-DAFAEELKPHQVI 290 (292)
Q Consensus 213 ~~~ide~e~~~~L~~Av~caILApagp~RSrlL~~L~kDer~~~Lp~y~iL~Kmf~~r-ii~~~ev-~~F~~~L~pHQ~a 290 (292)
..-|+.+|..+|.++|+|+||+|+||+|+++++++++|++++++|.|..|.|+|.++ |++|+.+ +.|...|.+|+.+
T Consensus 250 -~~~d~~~~~~~L~~~v~~~iLa~~~~~~~~ll~~~~~~~~~~~l~~~~~L~k~f~~~~L~~~~~~~~~~~~~L~~~~~~ 328 (445)
T 4b4t_P 250 -IKSDEAKWKPVLSHIVYFLVLSPYGNLQNDLIHKIQNDNNLKKLESQESLVKLFTTNELMRWPIVQKTYEPVLNEDDLA 328 (445)
T ss_dssp -HHSCHHHHHHHHHHHHHHHHHSSCSSTTHHHHHSHHHHSSCHHHHHHHHHHHHHHHCCSSSHHHHHHHTCSSTTTCCSS
T ss_pred -ccCCHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHhhcccccccHHHHHHHHHHHhchHhhhHHHHHHHHHHhcccchh
Confidence 233889999999999999999999999999999999999999999999999999777 8888654 7799999999875
No 2
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.64 E-value=9.2e-17 Score=155.67 Aligned_cols=159 Identities=15% Similarity=0.040 Sum_probs=142.0
Q ss_pred cCcccchhHhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhh
Q 022765 85 QPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKAS 164 (292)
Q Consensus 85 ~~~~i~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s 164 (292)
..++...|.++.+....||+.|...||+.+|.+++..+...++ +...|+++|+.++|+|++.+||..|..+++|++
T Consensus 120 ~~~~~~~e~e~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~----~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~ 195 (429)
T 4b4t_R 120 LEEDDEGELEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAI----STGAKIDVMLTIARLGFFYNDQLYVKEKLEAVN 195 (429)
T ss_dssp HHHCCSCCCCCSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHT----CCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHhhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcC----ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 3456677888899999999999999999999999999988875 347899999999999999999999999999999
Q ss_pred hhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhcCCCCCCHHHHHHHHHHHHHHHhcCCCCchHHHH
Q 022765 165 FLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRV 244 (292)
Q Consensus 165 ~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~~~~~~~~~~ide~e~~~~L~~Av~caILApagp~RSrl 244 (292)
.++.+..+++.+.+|+.|.+.++.+.|+|.+||+.|++++.+ +.. .+.......+++|++++.+++.|+++
T Consensus 196 ~~~~~~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t-------~~~--~e~~~~~~~~~y~~l~al~~~~r~~l 266 (429)
T 4b4t_R 196 SMIEKGGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLAT-------FTS--IELTSYESIATYASVTGLFTLERTDL 266 (429)
T ss_dssp HHHTTCCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHH-------SCC--SCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HhhhcCCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhcc-------CCc--cchhhHHHHHHHHHHHHHhcCCHHHH
Confidence 999998999999999999999999999999999999999886 222 23366778899999999999999999
Q ss_pred HHHHhccccccC
Q 022765 245 LATLYKDERCSK 256 (292)
Q Consensus 245 L~~L~kDer~~~ 256 (292)
...+..+++...
T Consensus 267 ~~~v~~~~~~~~ 278 (429)
T 4b4t_R 267 KSKVIDSPELLS 278 (429)
T ss_dssp HHSSSSSHHHHH
T ss_pred HHHHhcCHHHHh
Confidence 999999977644
No 3
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.45 E-value=2.7e-12 Score=118.05 Aligned_cols=209 Identities=11% Similarity=0.083 Sum_probs=159.4
Q ss_pred HHHHHHHHhcCCC--hHHHHHHHHHHHHhhcCcccchhHhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChH
Q 022765 57 LLQTFAQELGRLE--PETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDT 134 (292)
Q Consensus 57 ~l~~~~~~l~~l~--~~~~~~~~~~~L~~i~~~~i~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~ 134 (292)
.+...+..+...+ .+....+...++...... ..+..++++...||.+|+..|+|.+|.+.+..+..++. +.++..
T Consensus 96 ~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~-~~~~~~ 172 (434)
T 4b4t_Q 96 VLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKRE--KRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFK-KLDDKP 172 (434)
T ss_dssp HHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHS--SCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT-TSSCST
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh--CccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHH-hcccch
Confidence 3444455555554 334555555555543322 23345788999999999999999999999999988885 688899
Q ss_pred HHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccC-chHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhcCC
Q 022765 135 FRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSS-QQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGD 213 (292)
Q Consensus 135 eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~-~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~~~~~~~~ 213 (292)
+++++|+.++++|+..||+.+|..+++++....... .++.++..++.+++++..+.++|.+|+..|.+.+.+... ..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~--~~ 250 (434)
T 4b4t_Q 173 SLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHN--LT 250 (434)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH--TT
T ss_pred hHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh--hh
Confidence 999999999999999999999999999999887665 456889999999999999999999999999999876431 11
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHh--ccccccCCCchhHHHHHHHhh
Q 022765 214 ETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLY--KDERCSKLKIYPILQKVYLER 270 (292)
Q Consensus 214 ~~ide~e~~~~L~~Av~caILApagp~RSrlL~~L~--kDer~~~Lp~y~iL~Kmf~~r 270 (292)
.......+...+...++|.++.+.++.....+.... ++...+.+|.+..|.+.|..+
T Consensus 251 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 309 (434)
T 4b4t_Q 251 THNSYEKACQVLKYMLLSKIMLNLIDDVKNILNAKYTKETYQSRGIDAMKAVAEAYNNR 309 (434)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCSSSSTTCCCHHHHHHHHHHHHHHHT
T ss_pred hhhhHHHHHHHHHHHHHHHHhccchhHHHhHHHHHHHHHHhcchhhhHHHHHHHHHHhh
Confidence 222456677788888888888877776666665432 233445567788888888666
No 4
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.24 E-value=5.4e-11 Score=114.46 Aligned_cols=182 Identities=14% Similarity=0.090 Sum_probs=137.0
Q ss_pred HHHHHHhhccHHHHHHHhccCCCCC----------CCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCc
Q 022765 102 LADLYESEQQWSKAAQMLSGIDLDS----------GMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQ 171 (292)
Q Consensus 102 LA~i~E~e~~~~~AA~~L~~I~vEt----------~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~ 171 (292)
+..+.+...|..+|.+.|.++--.- .+..-..+..+.+.+.|+|+||+.||...|+.+++++..++++.+
T Consensus 82 ~~~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~ 161 (393)
T 4b4t_O 82 LLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKD 161 (393)
T ss_dssp THHHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccC
Confidence 4455666778888888887652211 111123356889999999999999999999999999999999888
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhcCCCCCCHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhcc
Q 022765 172 QEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKD 251 (292)
Q Consensus 172 ~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~~~~~~~~~~ide~e~~~~L~~Av~caILApagp~RSrlL~~L~kD 251 (292)
+.+.++++..++++..+++++|-.++.+|+.++....- .....++++++....-.+++|++++|.++.++++|+.-+.+
T Consensus 162 ~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~-~~~~~~~~~~~~~~a~~l~~~all~~~i~~f~eLL~~p~i~ 240 (393)
T 4b4t_O 162 SIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTL-EPSTSITLAERQQLAYDLSISALLGDKIYNFGELLHHPIME 240 (393)
T ss_dssp CSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-TTSSSCSHHHHHHHHHHHHHHHHHCCSSCSTHHHHHSCCTT
T ss_pred CccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhc-cccccCCHHHHHHHHHHHHHHHHcCCCCCChHHHhCChHHH
Confidence 88888999999999999999988888888888764210 01245689999999999999999999999999999987776
Q ss_pred ccccCCCchhHHHHHH-HhhhcChhHHHHHHhhcCCcc
Q 022765 252 ERCSKLKIYPILQKVY-LERILRKPEIDAFAEELKPHQ 288 (292)
Q Consensus 252 er~~~Lp~y~iL~Kmf-~~rii~~~ev~~F~~~L~pHQ 288 (292)
..... |.+. .++ +-++....++.+|.+.+++|+
T Consensus 241 ~L~~~-~~~~---~l~~Ll~~f~~g~~~~f~~~~~~~~ 274 (393)
T 4b4t_O 241 TIVND-SNYD---WLFQLLNALTVGDFDKFDSLIKVQI 274 (393)
T ss_dssp SSCSS-SSTT---HHHHHHHHHHHTCHHHHHHHCCHHH
T ss_pred HhhcC-CchH---HHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 64322 3222 122 334555677888888888774
No 5
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=98.80 E-value=7.2e-07 Score=86.35 Aligned_cols=253 Identities=10% Similarity=0.124 Sum_probs=176.8
Q ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHh--cCCcchhhHHHHHHHHHHHhcCCChHH--HHHHHHHHHHhhcCcccchhHh
Q 022765 19 EQYKHILSSVISSNDIVQAKKFIDHML--SDDVPLVVSRQLLQTFAQELGRLEPET--QKEIANYTLAQIQPRVVSFEEQ 94 (292)
Q Consensus 19 ~~y~~ll~~i~~~~~~~~l~~~i~~~~--~~~v~lv~sR~~l~~~~~~l~~l~~~~--~~~~~~~~L~~i~~~~i~~E~q 94 (292)
...-.+..-....++.+.|..++.++. =..++--=+-.++..++..+.++|+.. ..+++...+.--..-+-.|--
T Consensus 20 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~flr- 98 (394)
T 3txn_A 20 QGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFLR- 98 (394)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHH-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 344445555556678888888888763 244555556677888888888887443 456665555533222222222
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccC-chH
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSS-QQE 173 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~-~~~ 173 (292)
.++--.|++.|...|+|.+|.+++..+.-|-. +.=+....+++|+-..++|.+.+|+.++..++.++....... .++
T Consensus 99 -~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~-~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p 176 (394)
T 3txn_A 99 -QSLEARLIALYFDTALYTEALALGAQLLRELK-KLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPP 176 (394)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT-TSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred -HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCH
Confidence 22333689999999999999888777655442 111246899999999999999999999999999998877655 789
Q ss_pred HHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHhhhhhhcCCCCCCHHHHHHHHHHHHHHHhcCCCCchHHHHHH----HH
Q 022765 174 VLNLQYKVCYARILD-LKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLA----TL 248 (292)
Q Consensus 174 ~LkL~y~~~~ari~d-~~rkFLeAa~~Y~els~~~~~~~~~~~ide~e~~~~L~~Av~caILApagp~RSrlL~----~L 248 (292)
.++-.++.|.+.+.- ..|+|-+|+..|++-+.+ ...++...+.++|.-.++|++++.--++...++. .-
T Consensus 177 ~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~------f~~~~~~~~~~~lkYlvL~aLl~~~r~el~~~l~~~~~~~ 250 (394)
T 3txn_A 177 KVQGALDLQSGILHAADERDFKTAFSYFYEAFEG------FDSVDSVKALTSLKYMLLCKIMLGQSDDVNQLVSGKLAIT 250 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH------HTTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHSHHHHT
T ss_pred HHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhc------ccccccHHHHHHHHHHHHHHHHcCCHHHHHHHhccccccc
Confidence 999999999999999 899999999999997543 1456667788999999999999976445444332 22
Q ss_pred hccccccCCCchhHHHHHHHhhhcChhHHHHHHhhcCCcc
Q 022765 249 YKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQ 288 (292)
Q Consensus 249 ~kDer~~~Lp~y~iL~Kmf~~rii~~~ev~~F~~~L~pHQ 288 (292)
|.+ +.++.+..|.+.|... ++..|.+.|..|+
T Consensus 251 ~~~---pei~~l~~L~~a~~~~-----dl~~f~~iL~~~~ 282 (394)
T 3txn_A 251 YSG---RDIDAMKSVAEASHKR-----SLADFQAALKEYK 282 (394)
T ss_dssp TCS---HHHHHHHHHHHHHHTT-----CHHHHHHHHHHST
T ss_pred cCC---ccHHHHHHHHHHHHhC-----CHHHHHHHHHHHH
Confidence 323 2334455566666443 5556665555543
No 6
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.60 E-value=4.9e-08 Score=97.63 Aligned_cols=145 Identities=14% Similarity=0.168 Sum_probs=112.3
Q ss_pred CChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh-hhhh
Q 022765 131 IDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQ-IQKR 209 (292)
Q Consensus 131 ~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~-~~~~ 209 (292)
-+.+-+.-++.-+.|+||+.+++.+|+.+++|+..-....+|.+ ..+|+.+.+||...+++|.+|..++..=.. +++
T Consensus 225 ~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q-~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~- 302 (523)
T 4b4t_S 225 HDNETKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSL-EARYFFYLSKINAIQLDYSTANEYIIAAIRKAPH- 302 (523)
T ss_dssp SSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSC-
T ss_pred cCcchhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-
Confidence 34556788999999999999999999999999985444455655 489999999999999999998766554332 321
Q ss_pred hcCCCCCCHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhccccccCCCchhHHHHHHHhhhcChhHHHHHHhhcCCccc
Q 022765 210 QIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQV 289 (292)
Q Consensus 210 ~~~~~~ide~e~~~~L~~Av~caILApagp~RSrlL~~L~kDer~~~Lp~y~iL~Kmf~~rii~~~ev~~F~~~L~pHQ~ 289 (292)
.......+..+++.+|.|-+|....|.|+.+....+ ++ .|..|..|.++| +..++..|.+.|.+||.
T Consensus 303 ----~~~a~gfr~~a~K~lI~V~LLlG~iP~r~lf~q~~l--~~--~L~pY~~Lv~Av-----r~GdL~~F~~~L~~h~~ 369 (523)
T 4b4t_S 303 ----NSKSLGFLQQSNKLHCCIQLLMGDIPELSFFHQSNM--QK--SLLPYYHLTKAV-----KLGDLKKFTSTITKYKQ 369 (523)
T ss_dssp ----SSSCSHHHHHHHHHHHHHHHHHTCCCCHHHHTTTSC--HH--HHHHHHHHHHHH-----HHTCHHHHHHHHHHTHH
T ss_pred ----chhhhhHHHHHHHHHHhHHhhcCCCCChHHhhchhH--HH--HHHHHHHHHHHH-----HcCCHHHHHHHHHHhcc
Confidence 233556789999999999999999999888754222 22 255577777776 55789999999999985
Q ss_pred c
Q 022765 290 I 290 (292)
Q Consensus 290 a 290 (292)
.
T Consensus 370 ~ 370 (523)
T 4b4t_S 370 L 370 (523)
T ss_dssp H
T ss_pred e
Confidence 3
No 7
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.04 E-value=0.069 Score=45.23 Aligned_cols=190 Identities=14% Similarity=0.086 Sum_probs=122.4
Q ss_pred hhHhHHHHHHHHHHhhcCCCHHHHHHHHHHHhc--------CCcchhhHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhc
Q 022765 14 QRQKIEQYKHILSSVISSNDIVQAKKFIDHMLS--------DDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQ 85 (292)
Q Consensus 14 ~~~~~~~y~~ll~~i~~~~~~~~l~~~i~~~~~--------~~v~lv~sR~~l~~~~~~l~~l~~~~~~~~~~~~L~~i~ 85 (292)
+......|..+-......++.+.-..+.+..+. +......+...+..+..... ..+........++....
T Consensus 23 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g--~~~~A~~~~~~al~~~~ 100 (311)
T 3nf1_A 23 IPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQN--KYKDAANLLNDALAIRE 100 (311)
T ss_dssp SCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHH
Confidence 334556677777677777777555555555443 33333333333433333332 23444555555555432
Q ss_pred CcccchhHhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCc--cCChHHHHHHHHHHHHHHhccCchhhHHHHHhhh
Q 022765 86 PRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMR--VIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKA 163 (292)
Q Consensus 86 ~~~i~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~--~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~ 163 (292)
.....-..........++.++...|++.+|...+...- +.... .-+.......|...+++|...|++..|..+++++
T Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~-~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 179 (311)
T 3nf1_A 101 KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRAL-EIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRA 179 (311)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH-HHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHH-HHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 11001123456778889999999999999999887631 10000 0123456788999999999999999999999999
Q ss_pred hhhcccC--chHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 164 SFLVSSS--QQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 164 s~~~~~~--~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
..+.... .+.......+..+++++-..++|-+|...|.+....
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 180 LEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp HHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 8876443 333445677888899999999999999888888764
No 8
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=96.82 E-value=0.026 Score=42.49 Aligned_cols=112 Identities=10% Similarity=-0.012 Sum_probs=90.2
Q ss_pred HhHHHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCc
Q 022765 93 EQVLIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQ 171 (292)
Q Consensus 93 ~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~ 171 (292)
...+.+-..++.++...|++.+|...+... .+-. ..-+.......+..++..|...|++..|..+.+++..+.....
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~--~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 83 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAK--EFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK 83 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH--HhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC
Confidence 345677788999999999999999888652 2211 1224455678999999999999999999999999999887777
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 172 QEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 172 ~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
++......+..++.++-..++|-+|-..|.+....
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 84 DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 118 (164)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 77777888889999999999998888888776553
No 9
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=96.69 E-value=0.06 Score=40.42 Aligned_cols=112 Identities=10% Similarity=-0.013 Sum_probs=87.6
Q ss_pred HhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCch
Q 022765 93 EQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQ 172 (292)
Q Consensus 93 ~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~ 172 (292)
...+.....++.++...|++.+|.+.+...- +-....-+.......+..++..|...+++..|..+.+++..+.....+
T Consensus 46 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 124 (164)
T 3ro3_A 46 AAERIAYSNLGNAYIFLGEFETASEYYKKTL-LLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKD 124 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH-HHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccc
Confidence 3445677889999999999999998876521 111111234456889999999999999999999999999988876666
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 173 EVLNLQYKVCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 173 ~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
+......+..++.++-..++|-+|...|.+...
T Consensus 125 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 157 (164)
T 3ro3_A 125 RIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 157 (164)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 777777888889999999999888877776554
No 10
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=96.61 E-value=0.11 Score=45.42 Aligned_cols=178 Identities=16% Similarity=0.061 Sum_probs=113.2
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHhcCCcchhhHHHHHH---HHHHHh-cCCChHHHHHHHHHHHHhhcCcccchhHhH
Q 022765 20 QYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQ---TFAQEL-GRLEPETQKEIANYTLAQIQPRVVSFEEQV 95 (292)
Q Consensus 20 ~y~~ll~~i~~~~~~~~l~~~i~~~~~~~v~lv~sR~~l~---~~~~~l-~~l~~~~~~~~~~~~L~~i~~~~i~~E~q~ 95 (292)
.+...+...+..++.+....+++.+.......-..++++. .+.... ..-..+........+|....+..-.+ ..
T Consensus 77 ~l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~--~~ 154 (293)
T 3u3w_A 77 QFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVY--QN 154 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTT--HH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHH--HH
Confidence 3444455556667777777777777654332222233221 122222 22245666777777777433222222 34
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCC--CCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGID--LDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQE 173 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~--vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~ 173 (292)
+.+-..|+.+|...|++.+|-..+...- .+.. .-.......+|..++..|.+.|++..|..+++++..+..+.++.
T Consensus 155 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~ 232 (293)
T 3u3w_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEAL--HDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc--ccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcH
Confidence 5567889999999999999988776531 0111 12556778899999999999999999999999999887665555
Q ss_pred HHHHHHHHHHHHHHHHhhHH-HHHHHHHH
Q 022765 174 VLNLQYKVCYARILDLKRKF-LEAALRYY 201 (292)
Q Consensus 174 ~LkL~y~~~~ari~d~~rkF-LeAa~~Y~ 201 (292)
...-..+...+.++...++. =+|-..|.
T Consensus 233 ~~~~~~~~~lg~~~~~~g~~~~~A~~~~~ 261 (293)
T 3u3w_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYK 261 (293)
T ss_dssp TTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHH
Confidence 55566677777777777743 44443333
No 11
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=96.53 E-value=0.29 Score=41.21 Aligned_cols=113 Identities=10% Similarity=-0.035 Sum_probs=90.0
Q ss_pred HhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCch
Q 022765 93 EQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQ 172 (292)
Q Consensus 93 ~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~ 172 (292)
...+.....++.++...|++.+|.+.+...- +.....-+.......+...+.+|...|++..|..+.+++..+.....+
T Consensus 180 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~-~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 258 (338)
T 3ro2_A 180 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRL-LIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD 258 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH-HHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH-HHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcc
Confidence 3446677889999999999999998886521 110111234556779999999999999999999999999988877777
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 173 EVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 173 ~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.......+...++++-..++|-+|...|.+....
T Consensus 259 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 292 (338)
T 3ro2_A 259 RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 292 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 7777888889999999999999998888776553
No 12
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=96.38 E-value=0.15 Score=42.95 Aligned_cols=111 Identities=11% Similarity=0.012 Sum_probs=88.9
Q ss_pred hHHHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCch
Q 022765 94 QVLIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQ 172 (292)
Q Consensus 94 q~a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~ 172 (292)
..+.....++.++...|++.+|.+.+... .+.. ..-+.......+...+++|...|++..|..+.+++........+
T Consensus 221 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~--~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 298 (338)
T 3ro2_A 221 AERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR--QLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKD 298 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH--hhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCC
Confidence 34567788999999999999999888752 1111 11234556889999999999999999999999999988876666
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 173 EVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 173 ~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.......+..+++++...++|=+|...|.+....
T Consensus 299 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 332 (338)
T 3ro2_A 299 RIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI 332 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 6667777888999999999999998888777663
No 13
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=96.37 E-value=0.41 Score=42.06 Aligned_cols=111 Identities=11% Similarity=0.009 Sum_probs=89.2
Q ss_pred hHHHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCch
Q 022765 94 QVLIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQ 172 (292)
Q Consensus 94 q~a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~ 172 (292)
..+.....++.++...|++.+|...+... .+.. ..-+.......+..++.+|+..|++..|..+.+++..+.....+
T Consensus 225 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~--~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 302 (406)
T 3sf4_A 225 AERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR--QLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELND 302 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH--hCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC
Confidence 44567788999999999999999888652 1111 11234456889999999999999999999999999988877666
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 173 EVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 173 ~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.......+..+++++-..++|-+|...|.+....
T Consensus 303 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 336 (406)
T 3sf4_A 303 RIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI 336 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 6667778888999999999999998888887664
No 14
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=96.35 E-value=0.28 Score=43.77 Aligned_cols=113 Identities=11% Similarity=-0.049 Sum_probs=89.3
Q ss_pred HhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCch
Q 022765 93 EQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQ 172 (292)
Q Consensus 93 ~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~ 172 (292)
...+.....++.+|...|++.+|.+.+... ++.....-........|...+++|+..|++..|..+++++..+.....+
T Consensus 220 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a-l~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 298 (411)
T 4a1s_A 220 GAQGRACGNLGNTYYLLGDFQAAIEHHQER-LRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGE 298 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCChHHHHHHHHHH-HHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCC
Confidence 345667788999999999999999888652 1110111234456679999999999999999999999999998877667
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 173 EVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 173 ~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.......+..+++++-..++|-+|...|.+....
T Consensus 299 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 332 (411)
T 4a1s_A 299 REVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAI 332 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 7777888889999999999999998888776654
No 15
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=96.22 E-value=0.079 Score=38.67 Aligned_cols=104 Identities=13% Similarity=0.077 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccC-ch
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSS-QQ 172 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~-~~ 172 (292)
.+..-..++.++...|+|.+|...+... ..+. .-...|...+.+|...+++..|..+++++....... .+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~--------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 74 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDP--------TNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENRED 74 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC--------ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchh
Confidence 3455577899999999999999988763 1111 125688999999999999999999999998887542 44
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 173 EVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 173 ~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.......+..++.++-..++|-+|-..|......
T Consensus 75 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 75 YRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 4444566777888898999999988888877664
No 16
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=96.14 E-value=0.23 Score=44.39 Aligned_cols=133 Identities=10% Similarity=-0.038 Sum_probs=97.4
Q ss_pred hHHHHHHHHHHHHhhcCcccchhHhHHHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHh
Q 022765 70 PETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYL 148 (292)
Q Consensus 70 ~~~~~~~~~~~L~~i~~~~i~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~L 148 (292)
.+........++...... ......+.....++.+|...|++.+|...+... .+.. ..-+.......|...+++|+
T Consensus 239 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~--~~~~~~~~~~~~~~la~~~~ 314 (411)
T 4a1s_A 239 FQAAIEHHQERLRIAREF--GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAV--ELGEREVEAQSCYSLGNTYT 314 (411)
T ss_dssp HHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHH
Confidence 344455555555543321 122234567788999999999999999988652 1111 11233456889999999999
Q ss_pred ccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 149 EDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 149 e~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
..|++..|..+++++..+.....+.......+..+++++...++|-+|...|.+....
T Consensus 315 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 372 (411)
T 4a1s_A 315 LLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQHLQL 372 (411)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 9999999999999999888766666667777888999999999998888888777664
No 17
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=96.10 E-value=0.65 Score=40.71 Aligned_cols=113 Identities=10% Similarity=-0.035 Sum_probs=89.3
Q ss_pred HhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCch
Q 022765 93 EQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQ 172 (292)
Q Consensus 93 ~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~ 172 (292)
...+.....++.++...|++.+|...+...- +-....-+.......|...+.+|...|++..|..+.+++..+.....+
T Consensus 184 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al-~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 262 (406)
T 3sf4_A 184 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRL-LIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD 262 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTBHHHHHHHHHHHH-HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHH-HHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcC
Confidence 4456678889999999999999998876521 110111234456779999999999999999999999999988877777
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 173 EVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 173 ~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.......+..++.++-..++|-+|-..|.+....
T Consensus 263 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 296 (406)
T 3sf4_A 263 RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 296 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 7777888888999999999998888887776553
No 18
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=96.10 E-value=0.39 Score=38.14 Aligned_cols=133 Identities=11% Similarity=0.036 Sum_probs=97.7
Q ss_pred hHHHHHHHHHHHHhhcCcccchhHhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccC--ChHHHHHHHHHHHHHH
Q 022765 70 PETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVI--DDTFRLSKCVQIARLY 147 (292)
Q Consensus 70 ~~~~~~~~~~~L~~i~~~~i~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~--~~~eKl~~~l~i~rL~ 147 (292)
.+........++....... -....+.....++.++...|++.+|...+... ++-. ... +.......+..++.+|
T Consensus 42 ~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a-l~~~-~~~~~~~~~~~~~~~~lg~~~ 117 (203)
T 3gw4_A 42 FDEARASFQALQQQAQKSG--DHTAEHRALHQVGMVERMAGNWDAARRCFLEE-RELL-ASLPEDPLAASANAYEVATVA 117 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHH-HHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcC--CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHHH-HHcCccHHHHHHHHHHHHHHH
Confidence 3445555555555443322 23445677888999999999999998887652 1110 011 2336778899999999
Q ss_pred hccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 148 LEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 148 Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...|++..|..++.++..+.....+.......+..++.++-..++|=+|...|.+....
T Consensus 118 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 176 (203)
T 3gw4_A 118 LHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDI 176 (203)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHH
Confidence 99999999999999998887666666666777788899999999998888888776654
No 19
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=95.98 E-value=0.29 Score=42.62 Aligned_cols=131 Identities=15% Similarity=0.028 Sum_probs=88.4
Q ss_pred ChHHHHHHHHHHHHhhcCcccchhHhHHHHHHHHHHHHHhhccHHHHHHHhccCC-C-CCCCccCChHHHHHHHHHHHHH
Q 022765 69 EPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGID-L-DSGMRVIDDTFRLSKCVQIARL 146 (292)
Q Consensus 69 ~~~~~~~~~~~~L~~i~~~~i~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~-v-Et~~~~~~~~eKl~~~l~i~rL 146 (292)
..+........+|.......-.+ ..+.+-..++.+|...|++.+|-..+...- + +.. .-+....+..|..++..
T Consensus 130 ~~~~A~~~~~~al~~~~~~~~~~--~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~--~~~~~~~~~~~~nlg~~ 205 (293)
T 2qfc_A 130 DYEYCILELKKLLNQQLTGIDVY--QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL--HDNEEFDVKVRYNHAKA 205 (293)
T ss_dssp CHHHHHHHHHHHHTTCCCSSCTT--HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCchH--HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc--CccccchHHHHHhHHHH
Confidence 44455555566665443322222 246677889999999999999998886521 1 110 11223344799999999
Q ss_pred HhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 022765 147 YLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDI 203 (292)
Q Consensus 147 ~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~el 203 (292)
|...|++..|..+.+|+..+..+.++....-..+...+.++...++|=+|...|++-
T Consensus 206 y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~ 262 (293)
T 2qfc_A 206 LYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKK 262 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 999999999999999998877544444445566677788887777777775554443
No 20
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=95.86 E-value=0.61 Score=38.40 Aligned_cols=134 Identities=12% Similarity=-0.014 Sum_probs=87.5
Q ss_pred hHHHHHHHHHHHHhhcCcccchhHhHHHHHHHHHHHHHhhccHHHHHHHhccCCCC--CCCccCChHHHHHHHHHHHHHH
Q 022765 70 PETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLD--SGMRVIDDTFRLSKCVQIARLY 147 (292)
Q Consensus 70 ~~~~~~~~~~~L~~i~~~~i~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vE--t~~~~~~~~eKl~~~l~i~rL~ 147 (292)
.+........++.........-..........|+.++...|++.+|...+...--- ... .-+.......+...+++|
T Consensus 101 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~~la~~~ 179 (283)
T 3edt_B 101 YKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRL-GPDDPNVAKTKNNLASCY 179 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHS-CTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHH
Confidence 44455555555554321111112345677888999999999999999988653110 000 012345678999999999
Q ss_pred hccCchhhHHHHHhhhhhhcccC-------------------------------------------chHHHHHHHHHHHH
Q 022765 148 LEDDDAVNAEAFINKASFLVSSS-------------------------------------------QQEVLNLQYKVCYA 184 (292)
Q Consensus 148 Le~~D~~~Ae~~~nK~s~~~~~~-------------------------------------------~~~~LkL~y~~~~a 184 (292)
...|++..|..+.+++..+.... .+..-....+..++
T Consensus 180 ~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la 259 (283)
T 3edt_B 180 LKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLG 259 (283)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 99999999999999998763210 02233445566678
Q ss_pred HHHHHhhHHHHHHHHHHHHH
Q 022765 185 RILDLKRKFLEAALRYYDIS 204 (292)
Q Consensus 185 ri~d~~rkFLeAa~~Y~els 204 (292)
.++-..++|-+|...|....
T Consensus 260 ~~~~~~g~~~~A~~~~~~al 279 (283)
T 3edt_B 260 ALYRRQGKLEAAHTLEDCAS 279 (283)
T ss_dssp HHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHH
Confidence 88888888877777666544
No 21
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.80 E-value=0.17 Score=37.99 Aligned_cols=104 Identities=12% Similarity=-0.086 Sum_probs=79.2
Q ss_pred HhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCch
Q 022765 93 EQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQ 172 (292)
Q Consensus 93 ~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~ 172 (292)
...+..-..+|..+...|+|.+|.+.+...--.. -+.......|...+..|...+++..|..+++++.....+ +
T Consensus 25 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~----~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--~ 98 (148)
T 2dba_A 25 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGLD----ATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGG--D 98 (148)
T ss_dssp CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSC----CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC--C
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHc----ccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc--C
Confidence 3445666789999999999999999988642111 123346889999999999999999999999999877432 2
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 173 EVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 173 ~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...+..++.++-..++|-+|-..|......
T Consensus 99 ----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 99 ----VKALYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp ----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 234456777788888888888888877664
No 22
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=95.58 E-value=1.1 Score=39.52 Aligned_cols=95 Identities=14% Similarity=0.035 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVL 175 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~L 175 (292)
..+...+|.++...|++.+|.+.+.. | .-.+.+...+++|+..|++..|..+++++...-.+ ..
T Consensus 101 ~~~~~~la~~~~~~g~~~~Al~~l~~-~-----------~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~----~~ 164 (291)
T 3mkr_A 101 TTFLLMAASIYFYDQNPDAALRTLHQ-G-----------DSLECMAMTVQILLKLDRLDLARKELKKMQDQDED----AT 164 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTT-C-----------CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----CH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHhC-C-----------CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC----cH
Confidence 44578899999999999999999998 1 22458889999999999999999999999776432 12
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 176 NLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 176 kL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...+-..++.+....++|=+|-..|.++...
T Consensus 165 ~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~ 195 (291)
T 3mkr_A 165 LTQLATAWVSLAAGGEKLQDAYYIFQEMADK 195 (291)
T ss_dssp HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCchHHHHHHHHHHHHHHh
Confidence 2333344455555667888888888887764
No 23
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.50 E-value=0.023 Score=51.52 Aligned_cols=111 Identities=8% Similarity=0.045 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
...++..+..++...|++.+|.+++...- +.............++.+.+++|.+.|++..|..+++++.......++..
T Consensus 94 ~~~~~~~l~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~ 172 (434)
T 4b4t_Q 94 VKVLKTLIEKFEQVPDSLDDQIFVCEKSI-EFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKP 172 (434)
T ss_dssp HHHHHHHHHHHCSCCSCHHHHHHHHHHHH-HHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCST
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccch
Confidence 34567778888888888888877665421 11001111223678999999999999999999999999988887777778
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.+..++...+|++-..++|-.|-..|......
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 204 (434)
T 4b4t_Q 173 SLVDVHLLESKVYHKLRNLAKSKASLTAARTA 204 (434)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 88999999999999999998887777665443
No 24
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=95.47 E-value=0.13 Score=42.51 Aligned_cols=112 Identities=17% Similarity=0.105 Sum_probs=84.8
Q ss_pred hHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCcc--CChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccC-
Q 022765 94 QVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRV--IDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSS- 170 (292)
Q Consensus 94 q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~--~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~- 170 (292)
..+.....|+.++...|++.+|...+...- +..... -++......|...+..|...|++..|..+..++..+....
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al-~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 119 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDAL-AIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVL 119 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHH-HHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHc
Confidence 456777889999999999999999887631 110000 1234678899999999999999999999999998886432
Q ss_pred -chHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 171 -QQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 171 -~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.+.......+..++.++-..++|-+|-..|.+....
T Consensus 120 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 120 GKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 222345667778889999999998888888777654
No 25
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=95.46 E-value=0.69 Score=40.21 Aligned_cols=138 Identities=13% Similarity=0.042 Sum_probs=96.2
Q ss_pred hcCCChHHHHHHHHHHHHhhcCcccchhHhHHHHHHHHHHHHHhhccHHHHHHHhcc-CCCCCCCccCChHHHHHHHHHH
Q 022765 65 LGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSG-IDLDSGMRVIDDTFRLSKCVQI 143 (292)
Q Consensus 65 l~~l~~~~~~~~~~~~L~~i~~~~i~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~-I~vEt~~~~~~~~eKl~~~l~i 143 (292)
+..-.-+.........+..... .....+.......++.++...|++.+|-..+.. +.... ...+.......|..+
T Consensus 86 ~~~~~y~~A~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~--~~~~~~~~~~~~~~l 161 (293)
T 2qfc_A 86 CKQKRYKEIYNKVWNELKKEEY--HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQL--TGIDVYQNLYIENAI 161 (293)
T ss_dssp HHTTCHHHHHHHHHHHHHTCCC--CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCC--CSSCTTHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHhccccC--ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHh--cCCchHHHHHHHHHH
Confidence 3333444455555555554322 333345556667799999999999999988643 22211 112333467899999
Q ss_pred HHHHhccCchhhHHHHHhhhhhhcccC-chHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 144 ARLYLEDDDAVNAEAFINKASFLVSSS-QQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 144 ~rL~Le~~D~~~Ae~~~nK~s~~~~~~-~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+.+|...|++..|..+.+|+..+.... ++..+....+..++.++...++|-+|-..|.+....
T Consensus 162 g~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~ 225 (293)
T 2qfc_A 162 ANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999999999999999999766433 345555577788899999999998888888776543
No 26
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=95.45 E-value=0.059 Score=42.89 Aligned_cols=93 Identities=14% Similarity=0.120 Sum_probs=70.8
Q ss_pred HHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHH
Q 022765 101 KLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYK 180 (292)
Q Consensus 101 ~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~ 180 (292)
.|..++...|++.+|...++.. .-.+.+....+..++++|.+.||+..|..+++|+..+-.+ +. ..+
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a-------~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~--~~----~a~ 68 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGS-------TPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER--DP----KAH 68 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHH-------SCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CH----HHH
T ss_pred HhHHHHHHcChHHHHHHHHHHh-------cccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CH----HHH
Confidence 3678888999999998888762 1134466677889999999999999999999999887543 22 345
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 181 VCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 181 ~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...+.++...++|-+|-..|......
T Consensus 69 ~~lg~~~~~~~~~~~A~~~~~~al~~ 94 (150)
T 4ga2_A 69 RFLGLLYELEENTDKAVECYRRSVEL 94 (150)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCchHHHHHHHHHHHHh
Confidence 66788888899999999999888775
No 27
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=95.43 E-value=0.38 Score=38.19 Aligned_cols=111 Identities=12% Similarity=-0.022 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCc-hH
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQ-QE 173 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~-~~ 173 (292)
.+.+...++.++...|++.+|...+... ++-....-.+......+..++.+|...||+..|..+.+++..+..... ++
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a-l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 103 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQAL-QQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDP 103 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHH-HHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccH
Confidence 4667788999999999999998887652 111111114556788999999999999999999999999999876554 45
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 174 VLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 174 ~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
......+...+.++-..++|-+|-..|.+....
T Consensus 104 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 136 (203)
T 3gw4_A 104 LAASANAYEVATVALHFGDLAGARQEYEKSLVY 136 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 566777888899999999998888888776553
No 28
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=95.37 E-value=0.099 Score=44.22 Aligned_cols=113 Identities=15% Similarity=0.059 Sum_probs=85.5
Q ss_pred hHHHHHHHHHHHHHhhccHHHHHHHhccCCCCC-CCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccC--
Q 022765 94 QVLIIREKLADLYESEQQWSKAAQMLSGIDLDS-GMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSS-- 170 (292)
Q Consensus 94 q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt-~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~-- 170 (292)
..+..-..++.++...|++.+|...+...---. ..+.-+.......+...+.+|...|++..|..+.+++..+....
T Consensus 25 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 104 (311)
T 3nf1_A 25 ARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLG 104 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 456667889999999999999999887631100 00000345678899999999999999999999999998876443
Q ss_pred chHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 171 QQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 171 ~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.+.......+..++.++-..++|-+|-..|.+....
T Consensus 105 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 140 (311)
T 3nf1_A 105 KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEI 140 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 344456677788899999899988888877776553
No 29
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=95.22 E-value=0.27 Score=35.52 Aligned_cols=101 Identities=11% Similarity=-0.017 Sum_probs=78.0
Q ss_pred hHhHHHHHHHHHHHHHhhccHHHHHHHhccCC-CCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccC
Q 022765 92 EEQVLIIREKLADLYESEQQWSKAAQMLSGID-LDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSS 170 (292)
Q Consensus 92 E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~-vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~ 170 (292)
.......-..++.++...|+|.+|...+...- .+. .-...|...+..|...+++..|..+.+++......
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~--------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~- 78 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNP--------ANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA- 78 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC--------CCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-
Confidence 34456667789999999999999999887631 111 12568999999999999999999999999876543
Q ss_pred chHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 171 QQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 171 ~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+ ...+..++.++-..++|-+|...|......
T Consensus 79 -~----~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 79 -Y----SKAYGRMGLALSSLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp -C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -C----HHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 2 234567788888888998888888877664
No 30
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=95.20 E-value=1.1 Score=36.93 Aligned_cols=168 Identities=17% Similarity=0.100 Sum_probs=105.2
Q ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcCcccchhHhHHH
Q 022765 18 IEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLI 97 (292)
Q Consensus 18 ~~~y~~ll~~i~~~~~~~~l~~~i~~~~~~~v~lv~sR~~l~~~~~~l~~l~~~~~~~~~~~~L~~i~~~~i~~E~q~a~ 97 (292)
+..|..+-......++.+.-..+++..+..+-........+........ ..+........++..- | ....
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~--~~~~A~~~~~~a~~~~-~-------~~~~ 106 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEM--EPKLADEEYRKALASD-S-------RNAR 106 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHC-T-------TCHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHC-c-------CcHH
Confidence 4556655555556666544444444443222222222223333222222 3344555555555432 2 1245
Q ss_pred HHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHH
Q 022765 98 IREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNL 177 (292)
Q Consensus 98 lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL 177 (292)
+...++.++...|++.+|.+.+...-- .. ........|...+..|+..|++..|..+++++...... + .
T Consensus 107 ~~~~la~~~~~~g~~~~A~~~~~~~~~-~~----~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~--~----~ 175 (252)
T 2ho1_A 107 VLNNYGGFLYEQKRYEEAYQRLLEASQ-DT----LYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN--Q----P 175 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTT-CT----TCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC--C----H
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHh-Cc----cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc--c----H
Confidence 677899999999999999999877532 10 11234678899999999999999999999999776543 2 2
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 178 QYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 178 ~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
..+..++.++-..++|-+|-..|......
T Consensus 176 ~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 204 (252)
T 2ho1_A 176 SVALEMADLLYKEREYVPARQYYDLFAQG 204 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34567788888888888888887776653
No 31
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=95.03 E-value=0.28 Score=43.32 Aligned_cols=110 Identities=14% Similarity=0.022 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHHHHhhccHHHHHHHhcc-CCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCch
Q 022765 94 QVLIIREKLADLYESEQQWSKAAQMLSG-IDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQ 172 (292)
Q Consensus 94 q~a~lr~~LA~i~E~e~~~~~AA~~L~~-I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~ 172 (292)
..+.....++.+|...|++.+|...+.. +.+-. ..-+...-...|..++.+|.. +|+.+|..+.+|+..+.....+
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~--~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~ 150 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYV--ENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEER 150 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHH--TTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCC
Confidence 4466677888899999998888877653 11110 011233456788899999988 9999999999999888876555
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 173 EVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 173 ~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.......+.-++.++-..++|-+|...|......
T Consensus 151 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 151 LRQAAELIGKASRLLVRQQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 5556667777888888889998888888877654
No 32
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=94.97 E-value=0.89 Score=34.76 Aligned_cols=168 Identities=13% Similarity=0.037 Sum_probs=104.8
Q ss_pred HhHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcCcccchhHhH
Q 022765 16 QKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQV 95 (292)
Q Consensus 16 ~~~~~y~~ll~~i~~~~~~~~l~~~i~~~~~~~v~lv~sR~~l~~~~~~l~~l~~~~~~~~~~~~L~~i~~~~i~~E~q~ 95 (292)
.....|..+.......++.+.-...++.++...-.-......+...... .-..+........++.. .|. .
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~A~~~~~~~~~~-~~~-------~ 75 (186)
T 3as5_A 6 IRQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVK--TGAVDRGTELLERSLAD-APD-------N 75 (186)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHH-CTT-------C
T ss_pred hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHH--cCCHHHHHHHHHHHHhc-CCC-------C
Confidence 3445555555555555666555555555543332222222222222222 22334445555555543 222 2
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVL 175 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~L 175 (292)
..+...++.++...|++.+|.+.+...---. + .....|...++.|...|++..|..+.+++...... +
T Consensus 76 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~------~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--~--- 143 (186)
T 3as5_A 76 VKVATVLGLTYVQVQKYDLAVPLLIKVAEAN------P-INFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPN--E--- 143 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--C---
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC------c-HhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCcc--c---
Confidence 3556778999999999999999887631111 1 12468899999999999999999999999876533 2
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 176 NLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 176 kL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...+..+++++-..++|-+|...|......
T Consensus 144 -~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 173 (186)
T 3as5_A 144 -GKVHRAIAFSYEQMGRHEEALPHFKKANEL 173 (186)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 245567888888888988888888777654
No 33
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=94.97 E-value=1.9 Score=38.53 Aligned_cols=118 Identities=6% Similarity=-0.078 Sum_probs=76.8
Q ss_pred hHHHHHHHHHHHHhhcCcccchhHhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhc
Q 022765 70 PETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLE 149 (292)
Q Consensus 70 ~~~~~~~~~~~L~~i~~~~i~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le 149 (292)
.+........+++..... .-....+.....|+.+|...|++.+|.+.+... ++-....-+.......+..++..|+.
T Consensus 200 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~a-l~~~~~~~~~~~~~~~~~~l~~~~~~ 276 (383)
T 3ulq_A 200 YEDAISHFQKAYSMAEAE--KQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRA-IAVFEESNILPSLPQAYFLITQIHYK 276 (383)
T ss_dssp HHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHHHHTTCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHHHhhccchhHHHHHHHHHHHHHH
Confidence 344555555555543221 223445677888999999999999999887652 11100011213448899999999999
Q ss_pred cCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhh
Q 022765 150 DDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKR 191 (292)
Q Consensus 150 ~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~r 191 (292)
.|++..|..+.+++..+.....++.....|. ..+.+....+
T Consensus 277 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~-~l~~~~~~~~ 317 (383)
T 3ulq_A 277 LGKIDKAHEYHSKGMAYSQKAGDVIYLSEFE-FLKSLYLSGP 317 (383)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH-HHHHHHTSSC
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH-HHHHHHhCCC
Confidence 9999999999999988876555554444432 2455544444
No 34
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=94.86 E-value=1.3 Score=36.05 Aligned_cols=180 Identities=12% Similarity=-0.035 Sum_probs=111.9
Q ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcCcccchhHhHH
Q 022765 17 KIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVL 96 (292)
Q Consensus 17 ~~~~y~~ll~~i~~~~~~~~l~~~i~~~~~~~v~lv~sR~~l~~~~~~l~~l~~~~~~~~~~~~L~~i~~~~i~~E~q~a 96 (292)
..+.|..+-......++.+.-..+.+..+... .-......+........ ..+........++..-....- -.....
T Consensus 4 ~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~--~~~~A~~~~~~a~~~~~~~~~-~~~~~~ 79 (258)
T 3uq3_A 4 MADKEKAEGNKFYKARQFDEAIEHYNKAWELH-KDITYLNNRAAAEYEKG--EYETAISTLNDAVEQGREMRA-DYKVIS 79 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-CCTHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTC-CHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHcc--cHHHHHHHHHHHHHhCccccc-chHHHH
Confidence 45667777777777777755545555444322 22222223332222222 234455555555553221111 112336
Q ss_pred HHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccC-------------------ChHHHHHHHHHHHHHHhccCchhhHH
Q 022765 97 IIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVI-------------------DDTFRLSKCVQIARLYLEDDDAVNAE 157 (292)
Q Consensus 97 ~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~-------------------~~~eKl~~~l~i~rL~Le~~D~~~Ae 157 (292)
.+...++.++...|++.+|.+.+...---...+.. ........|...+..|+..|++..|.
T Consensus 80 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~ 159 (258)
T 3uq3_A 80 KSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAV 159 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHH
Confidence 67788999999999999999887653110000000 12345678999999999999999999
Q ss_pred HHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 158 AFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 158 ~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.+.+++....... ...+..++.++-..++|-+|-..|......
T Consensus 160 ~~~~~a~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 202 (258)
T 3uq3_A 160 KAYTEMIKRAPED------ARGYSNRAAALAKLMSFPEAIADCNKAIEK 202 (258)
T ss_dssp HHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCccc------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 9999998776432 245667888888899999888888887664
No 35
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=94.74 E-value=1 Score=36.98 Aligned_cols=102 Identities=10% Similarity=0.016 Sum_probs=78.1
Q ss_pred HHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCc-hHHHH
Q 022765 98 IREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQ-QEVLN 176 (292)
Q Consensus 98 lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~-~~~Lk 176 (292)
....++.++...|++.+|.+.+...- ...+ .-...|...+.+|...||+..|..+++++..+..+.. .....
T Consensus 44 ~~~~~~~~~~~~~~~~~A~~~~~~al------~~~p-~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 116 (228)
T 4i17_A 44 TAYNCGVCADNIKKYKEAADYFDIAI------KKNY-NLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLY 116 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH------HTTC-SHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHH------HhCc-chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHH
Confidence 44558999999999999998877531 1111 2467899999999999999999999999988776432 12233
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 177 LQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 177 L~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...+...+.++...++|-+|-..|......
T Consensus 117 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 146 (228)
T 4i17_A 117 AIYYLKEGQKFQQAGNIEKAEENYKHATDV 146 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred HHHHHHHhHHHHHhccHHHHHHHHHHHHhc
Confidence 356777888889999999999988887663
No 36
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=94.69 E-value=0.2 Score=36.73 Aligned_cols=95 Identities=9% Similarity=-0.014 Sum_probs=73.6
Q ss_pred HHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHH
Q 022765 98 IREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLN 176 (292)
Q Consensus 98 lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~Lk 176 (292)
--..++.++...|+|.+|...+... ..+. .....|...+.+|...+++..|..+++++...... +
T Consensus 18 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~~--------~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~--~---- 83 (133)
T 2lni_A 18 MVKNKGNECFQKGDYPQAMKHYTEAIKRNP--------KDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT--F---- 83 (133)
T ss_dssp HHHHHHHHHHHTTCSHHHHHHHHHHHTTCT--------TCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT--C----
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCC--------CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC--c----
Confidence 3456899999999999999988763 2221 12578999999999999999999999999886543 2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 177 LQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 177 L~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...+..++.++...++|-+|-..|......
T Consensus 84 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 84 IKGYTRKAAALEAMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 234556778888888888888888777664
No 37
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=94.68 E-value=0.46 Score=37.40 Aligned_cols=100 Identities=9% Similarity=-0.078 Sum_probs=79.4
Q ss_pred hHHHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCch
Q 022765 94 QVLIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQ 172 (292)
Q Consensus 94 q~a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~ 172 (292)
+.+..-..++.++...|+|.+|...+... .++. .-...|...+..|+..+++..|..+++++..+-.+ +
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p--------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~--~ 78 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAP--------ANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK--Y 78 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--C
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------cCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--C
Confidence 44566678999999999999999988763 1121 12578999999999999999999999999887643 2
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh
Q 022765 173 EVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQ 207 (292)
Q Consensus 173 ~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~~ 207 (292)
...+..++.++-..++|-+|-..|.......
T Consensus 79 ----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 79 ----SKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp ----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 3445667888889999999999998887753
No 38
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=94.60 E-value=0.52 Score=33.42 Aligned_cols=98 Identities=16% Similarity=-0.029 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVL 175 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~L 175 (292)
+..-..++.++...|+|.+|.+.+...-- ..+ .-...|...+..|+..+++..|..+.+++...... +.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~------~~~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--~~-- 72 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIK------LDP-HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD--WG-- 72 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------HCT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT--CH--
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHH------HCC-CcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc--cH--
Confidence 34456789999999999999998876411 111 12568999999999999999999999999877543 22
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 176 NLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 176 kL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
..+...+.++-..++|-+|-..|......
T Consensus 73 --~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 73 --KGYSRKAAALEFLNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp --HHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred --HHHHHHHHHHHHHhhHHHHHHHHHHHHHc
Confidence 34456677777888888888888777664
No 39
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=94.58 E-value=0.89 Score=33.82 Aligned_cols=98 Identities=11% Similarity=-0.051 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
+..-..++..+...|+|.+|...+... .++.. -...|...+..|+..|++..|..+++++..+-.+.
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~--------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---- 71 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE--------DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF---- 71 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC--------ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc----
Confidence 444567889999999999999988652 22221 24789999999999999999999999998875432
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYYDISQIQ 207 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~~ 207 (292)
...+...+.++-..++|-+|-..|.......
T Consensus 72 --~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 72 --VRAYIRKATAQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp --HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHhCHHHHHHHHHHHHHhC
Confidence 2345567888888999999988888877753
No 40
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=94.50 E-value=0.68 Score=35.69 Aligned_cols=104 Identities=13% Similarity=0.012 Sum_probs=81.4
Q ss_pred cchhHhHHHHHHHHHHHHHhhccHHHHHHHhcc-CCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhc
Q 022765 89 VSFEEQVLIIREKLADLYESEQQWSKAAQMLSG-IDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLV 167 (292)
Q Consensus 89 i~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~-I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~ 167 (292)
.++..+.+..-..+...+-..|+|.+|.+.+.. |.++.. -...|...+..|+..|++..|...++|+..+-
T Consensus 6 a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~--------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 77 (126)
T 4gco_A 6 AYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE--------NAILYSNRAACLTKLMEFQRALDDCDTCIRLD 77 (126)
T ss_dssp -CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--------CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhh
Confidence 345556666677789999999999999998865 333331 25689999999999999999999999998764
Q ss_pred ccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 168 SSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 168 ~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.+ +. ..+...+.++-..++|-+|-..|......
T Consensus 78 p~--~~----~a~~~lg~~~~~~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 78 SK--FI----KGYIRKAACLVAMREWSKAQRAYEDALQV 110 (126)
T ss_dssp TT--CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hh--hh----HHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 43 22 24556788889999999999999888775
No 41
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=94.45 E-value=1.3 Score=38.36 Aligned_cols=140 Identities=12% Similarity=0.026 Sum_probs=97.4
Q ss_pred HHHhcCCChHHHHHHHHHHHHhhcCcccchhHhHHHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHH
Q 022765 62 AQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKC 140 (292)
Q Consensus 62 ~~~l~~l~~~~~~~~~~~~L~~i~~~~i~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~ 140 (292)
...+..-.-+........++.. +....-..+....-..++.++-..|++.+|...+... .+... .-+....+.+|
T Consensus 83 ~~~~~~~~y~~a~~~~~~~l~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~--~~~~~~~~~~~ 158 (293)
T 3u3w_A 83 IMLCKQKRYKEIYNKVWNELKK--EEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLT--GIDVYQNLYIE 158 (293)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCC--CSCTTHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHhcc--ccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcc--cccHHHHHHHH
Confidence 3334444445555555555542 2222223344556667899999999999998877643 11111 11223567789
Q ss_pred HHHHHHHhccCchhhHHHHHhhhhhhcccC-chHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 141 VQIARLYLEDDDAVNAEAFINKASFLVSSS-QQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 141 l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~-~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
..++..|...|++..|..+.+++....... .+.......+..++.++-..++|-+|-..|.+...
T Consensus 159 ~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~ 224 (293)
T 3u3w_A 159 NAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE 224 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 999999999999999999999999877554 56777788888999999999999888777766554
No 42
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=94.32 E-value=0.81 Score=37.31 Aligned_cols=104 Identities=8% Similarity=-0.085 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccC-chH
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSS-QQE 173 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~-~~~ 173 (292)
.+..-..++.++...|+|.+|.+.+...- ... .....|...+..|...|++..|..+++++..+..+. .+.
T Consensus 4 ~a~~~~~~g~~~~~~~~~~~A~~~~~~a~------~~~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 75 (258)
T 3uq3_A 4 MADKEKAEGNKFYKARQFDEAIEHYNKAW------ELH--KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADY 75 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH------HHS--CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHH------Hhh--ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccch
Confidence 34555678999999999999999886531 111 224688999999999999999999999998877543 344
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 174 VLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 174 ~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
......+...+.++...++|-+|-..|......
T Consensus 76 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 108 (258)
T 3uq3_A 76 KVISKSFARIGNAYHKLGDLKKTIEYYQKSLTE 108 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 455677788889999999998888888877663
No 43
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=94.29 E-value=0.35 Score=42.69 Aligned_cols=108 Identities=10% Similarity=0.020 Sum_probs=80.6
Q ss_pred hHHHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCch
Q 022765 94 QVLIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQ 172 (292)
Q Consensus 94 q~a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~ 172 (292)
..+.....++.+|+. |++.+|...+..- .+... .-........|..++.+|...|++..|..+.+++..+..+..+
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~--~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 190 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFEN--EERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMEN 190 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHh--CCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC
Confidence 445667789999999 9999998877541 11110 1123345789999999999999999999999999988866544
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 022765 173 EVLNLQYKVCYARILDLKRKFLEAALRYYDIS 204 (292)
Q Consensus 173 ~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els 204 (292)
......++...+.+.-..++|-+|-..|.+..
T Consensus 191 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 191 YPTCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 44445566677777777788988888887776
No 44
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=94.15 E-value=0.64 Score=34.28 Aligned_cols=100 Identities=10% Similarity=-0.057 Sum_probs=73.2
Q ss_pred HHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHH
Q 022765 100 EKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQY 179 (292)
Q Consensus 100 ~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y 179 (292)
..+|..+...|+|.+|.+.+..+--... +.....+.+...+..|...||+..|..+.+++.....+... ....
T Consensus 6 ~~~a~~~~~~~~~~~A~~~~~~~~~~~p----~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~---~~~~ 78 (129)
T 2xev_A 6 YNVAFDALKNGKYDDASQLFLSFLELYP----NGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDK---AAGG 78 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCS----SSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTT---HHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHCC----CCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcc---cHHH
Confidence 4678899999999999998886421111 11234578889999999999999999999999887654321 1223
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 180 KVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 180 ~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+...+.++-..++|-+|-..|..+...
T Consensus 79 ~~~la~~~~~~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 79 LLKLGLSQYGEGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 345677777888888888888877664
No 45
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=94.08 E-value=0.42 Score=36.75 Aligned_cols=103 Identities=15% Similarity=0.132 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhcc-CCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccC-ch
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLSG-IDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSS-QQ 172 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~~-I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~-~~ 172 (292)
.+..-..|...+-..|+|.+|...... |.++.. -...|..++..|+..|++..|..+++|+..+..+. .+
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~--------~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 78 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS--------NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRAD 78 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--------CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchh
Confidence 344456788999999999999988864 333321 25689999999999999999999999998876543 33
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 173 EVLNLQYKVCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 173 ~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
....-.-+..++.++...++|-+|...|..-..
T Consensus 79 ~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 79 YKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 333333445567777888888888777766443
No 46
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=94.05 E-value=0.92 Score=32.29 Aligned_cols=98 Identities=12% Similarity=0.051 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVL 175 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~L 175 (292)
+.....++.++...|+|.+|.+.+...--.. + .....|...+..|...+++..|..+.+++...... +.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~------~-~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~--~~-- 77 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELD------P-NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN--NA-- 77 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CH--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC------c-CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc--cH--
Confidence 3455678999999999999999887642111 1 12468889999999999999999999999876432 22
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 176 NLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 176 kL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.....++.++-..++|-+|-..|.+....
T Consensus 78 --~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 78 --EAWYNLGNAYYKQGDYDEAIEYYQKALEL 106 (125)
T ss_dssp --HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 23446677777888888888877777664
No 47
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=93.93 E-value=1.6 Score=33.33 Aligned_cols=99 Identities=7% Similarity=0.064 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
.+..-..++.++...|++.+|.+.+...--... .....|...+..|...|++..|..+.+++...... +.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~--~~- 76 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDADA-------FDVDVALHLGIAYVKTGAVDRGTELLERSLADAPD--NV- 76 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTS-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CH-
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc-------cChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--CH-
Confidence 344556678888888888888888876422111 12457777888888888888888888887766432 11
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
..+..++.++-..++|-+|-..|......
T Consensus 77 ---~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 105 (186)
T 3as5_A 77 ---KVATVLGLTYVQVQKYDLAVPLLIKVAEA 105 (186)
T ss_dssp ---HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 23455677777777777777777666553
No 48
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=93.81 E-value=1.3 Score=33.60 Aligned_cols=98 Identities=15% Similarity=0.004 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchH
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQE 173 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~ 173 (292)
.+..-..+|.++...|+|.+|...+... ..+. .-...|...+..|+..+++..|..+.+++...... +
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~--------~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~--~- 80 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELNP--------SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK--Y- 80 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--C-
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc--c-
Confidence 4555677899999999999999888753 1111 12678999999999999999999999999887543 2
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 174 VLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 174 ~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...+..++.++-..++|-+|-..|......
T Consensus 81 ---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 81 ---IKGYYRRAASNMALGKFRAALRDYETVVKV 110 (166)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 234556778888888998888888887764
No 49
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=93.79 E-value=2.9 Score=39.13 Aligned_cols=104 Identities=11% Similarity=-0.005 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHH
Q 022765 97 IIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLN 176 (292)
Q Consensus 97 ~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~Lk 176 (292)
.....++.+|...|++.+|.+.+...---......+++.-...|...+..|...|++..|..+.+++..+-.+ +.
T Consensus 476 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~--~~--- 550 (597)
T 2xpi_A 476 LLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTN--DA--- 550 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSC--CH---
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC--Ch---
Confidence 4456789999999999999998876411000001133334789999999999999999999999999876532 22
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 177 LQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 177 L~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
..+..++.++-..+++-+|...|......
T Consensus 551 -~~~~~l~~~~~~~g~~~~A~~~~~~~l~~ 579 (597)
T 2xpi_A 551 -NVHTAIALVYLHKKIPGLAITHLHESLAI 579 (597)
T ss_dssp -HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 45677888888899999998888888775
No 50
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=93.77 E-value=1 Score=39.31 Aligned_cols=111 Identities=14% Similarity=0.045 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHHHHhhccHHHHHHHhcc-CCCCCCCccCChHHHHHHHHHHHHHHhcc-CchhhHHHHHhhhhhhcccCc
Q 022765 94 QVLIIREKLADLYESEQQWSKAAQMLSG-IDLDSGMRVIDDTFRLSKCVQIARLYLED-DDAVNAEAFINKASFLVSSSQ 171 (292)
Q Consensus 94 q~a~lr~~LA~i~E~e~~~~~AA~~L~~-I~vEt~~~~~~~~eKl~~~l~i~rL~Le~-~D~~~Ae~~~nK~s~~~~~~~ 171 (292)
..+.....++.+|...|++.+|...+.. +.+... .-....-...|..++.+|... |++..|..+.+|+..+.....
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~--~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~ 152 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTH--RGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ 152 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCC
Confidence 3456677899999999999999877643 222111 112334567899999999997 999999999999999887554
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 172 QEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 172 ~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+.......+.-.+.++-..++|=+|...|......
T Consensus 153 ~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 187 (292)
T 1qqe_A 153 SVALSNKCFIKCADLKALDGQYIEASDIYSKLIKS 187 (292)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 44444556677799999999999999999988775
No 51
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=93.73 E-value=0.16 Score=40.24 Aligned_cols=98 Identities=14% Similarity=0.084 Sum_probs=73.7
Q ss_pred hhHhHHHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc
Q 022765 91 FEEQVLIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS 169 (292)
Q Consensus 91 ~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~ 169 (292)
...+.......||.+|...|+|.+|.+.+... .++. + -.+.|...+.+|...|++..|..+.+++..+-.+
T Consensus 26 ~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p-------~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 97 (150)
T 4ga2_A 26 SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQE-------R-DPKAHRFLGLLYELEENTDKAVECYRRSVELNPT 97 (150)
T ss_dssp SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------C-CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC
Confidence 34455556678999999999999999988752 2222 1 2568999999999999999999999999887653
Q ss_pred CchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 022765 170 SQQEVLNLQYKVCYARILDLKRKFLEAALRYYD 202 (292)
Q Consensus 170 ~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~e 202 (292)
+.+ .+...+.++-..++|-++++.|.+
T Consensus 98 --~~~----~~~~la~~~~~~~~~~~aa~~~~~ 124 (150)
T 4ga2_A 98 --QKD----LVLKIAELLCKNDVTDGRAKYWVE 124 (150)
T ss_dssp --CHH----HHHHHHHHHHHHCSSSSHHHHHHH
T ss_pred --CHH----HHHHHHHHHHHcCChHHHHHHHHH
Confidence 222 244567777777788888887754
No 52
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=93.70 E-value=0.76 Score=36.29 Aligned_cols=97 Identities=14% Similarity=0.135 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHH-HhccCch--hhHHHHHhhhhhhcccCc
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARL-YLEDDDA--VNAEAFINKASFLVSSSQ 171 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL-~Le~~D~--~~Ae~~~nK~s~~~~~~~ 171 (292)
......++.+|...|++.+|...+... .++. .-...|...+.+ |+..|++ ..|..+++++......
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p--------~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~-- 113 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRG--------ENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSN-- 113 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHC--------SCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTT--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC--------CCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCC--
Confidence 345678999999999999999988753 1111 124688889998 8899998 9999999999877543
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 172 QEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 172 ~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+. ..+...++++-..++|-+|-..|......
T Consensus 114 ~~----~~~~~la~~~~~~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 114 EI----TALMLLASDAFMQANYAQAIELWQKVMDL 144 (177)
T ss_dssp CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred cH----HHHHHHHHHHHHcccHHHHHHHHHHHHhh
Confidence 22 23456777888888888888888777664
No 53
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=93.58 E-value=0.34 Score=34.70 Aligned_cols=70 Identities=6% Similarity=0.006 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 97 IIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 97 ~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
.....++.++...|+|.+|.+.+... .++. . -...|...+..|+..|++..|..+++++..+..+..+..
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-------~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 75 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITAQP-------Q-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVA 75 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-------C-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHH
Confidence 34567899999999999999887652 2222 1 146889999999999999999999999988776543433
No 54
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=93.55 E-value=3.9 Score=36.50 Aligned_cols=104 Identities=9% Similarity=0.042 Sum_probs=82.4
Q ss_pred HHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCch-HHHHHH
Q 022765 101 KLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQ-EVLNLQ 178 (292)
Q Consensus 101 ~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~-~~LkL~ 178 (292)
.++.++-..|++.+|.+.+... .+- ...-++.....+|..++..|...|++..|..+.+|+..+..+..+ ......
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 185 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAESKL--IFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQ 185 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTG--GGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHH--hhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHH
Confidence 4788899999999998887653 211 111234568999999999999999999999999999999877654 555667
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 179 YKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 179 y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
-+...+.++...++|=+|-..|......
T Consensus 186 ~~~~lg~~~~~~g~~~~A~~~~~~al~~ 213 (383)
T 3ulq_A 186 CHSLFATNFLDLKQYEDAISHFQKAYSM 213 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 7888899999999998888888776654
No 55
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=93.41 E-value=4.1 Score=36.41 Aligned_cols=106 Identities=8% Similarity=0.057 Sum_probs=71.5
Q ss_pred hHHHHHHHHHHHHhhcCcccchhHhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhc
Q 022765 70 PETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLE 149 (292)
Q Consensus 70 ~~~~~~~~~~~L~~i~~~~i~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le 149 (292)
.+........+|+.... ..-....+.....|+.+|...|++.+|.+.+... ++-....-++.. ...+..+++.|..
T Consensus 198 ~~~A~~~~~~al~~~~~--~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~a-l~~~~~~~~~~~-~~~~~~la~~~~~ 273 (378)
T 3q15_A 198 YDKALPHLEAALELAMD--IQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKA-AKVSREKVPDLL-PKVLFGLSWTLCK 273 (378)
T ss_dssp HHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH-HHHHHHHCGGGH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHHHhhCChhH-HHHHHHHHHHHHH
Confidence 34445555555554321 1222356777888999999999999998887653 111100122333 8889999999999
Q ss_pred cCchhhHHHHHhhhhhhcccCchHHHHHHH
Q 022765 150 DDDAVNAEAFINKASFLVSSSQQEVLNLQY 179 (292)
Q Consensus 150 ~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y 179 (292)
.|++..|..+.+++..+.....++.....+
T Consensus 274 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 303 (378)
T 3q15_A 274 AGQTQKAFQFIEEGLDHITARSHKFYKELF 303 (378)
T ss_dssp TTCHHHHHHHHHHHHHHCCTTCCSCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 999999999999999888766565555554
No 56
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=93.32 E-value=2.6 Score=41.17 Aligned_cols=137 Identities=9% Similarity=-0.013 Sum_probs=91.0
Q ss_pred cCCChHHHHHHHHHHHHhhcCcccchhHhHHHHHHHHHHHHHhhccHHHHHHHhcc---CCCCCCCccCChHHHHHHHHH
Q 022765 66 GRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSG---IDLDSGMRVIDDTFRLSKCVQ 142 (292)
Q Consensus 66 ~~l~~~~~~~~~~~~L~~i~~~~i~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~---I~vEt~~~~~~~~eKl~~~l~ 142 (292)
.+-.-+........+|..-..---.--..++.....||.+|...|+|.+|...... |..... |.-. -.-+..+..
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~l-G~~H-p~~a~~l~n 398 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLY-HHNN-AQLGMAVMR 398 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS-CTTC-HHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHc-CCCC-HHHHHHHHH
Confidence 33445566777777776543322222335788899999999999999999887654 111121 2211 235778999
Q ss_pred HHHHHhccCchhhHHHHHhhhhhhccc---CchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 143 IARLYLEDDDAVNAEAFINKASFLVSS---SQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 143 i~rL~Le~~D~~~Ae~~~nK~s~~~~~---~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
++.+|...|++..|+.+..|+..+... .+.+...-- +...+.....-++|=+|-.-|+..-.
T Consensus 399 La~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~-~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 399 AGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDL-EAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987753 233333221 24555555566777777777766644
No 57
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=93.30 E-value=1.3 Score=35.78 Aligned_cols=120 Identities=11% Similarity=0.027 Sum_probs=87.9
Q ss_pred HHHHHHHHHhhcCccc-----chhHhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHh
Q 022765 74 KEIANYTLAQIQPRVV-----SFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYL 148 (292)
Q Consensus 74 ~~~~~~~L~~i~~~~i-----~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~L 148 (292)
.++.....+.++.|.. ............++..+...|++.+|...+...- ..++ .-...|...+..|.
T Consensus 9 ~~~~~~l~~~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al------~~~P-~~~~~~~~lg~~~~ 81 (151)
T 3gyz_A 9 ESISTAVIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLC------IYDF-YNVDYIMGLAAIYQ 81 (151)
T ss_dssp CHHHHHHHHHHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH------HHCT-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH------HhCC-CCHHHHHHHHHHHH
Confidence 3334444444444433 4455666777889999999999999999987631 1111 12458999999999
Q ss_pred ccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 149 EDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 149 e~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
..|++..|....+|+..+..+. ++ .+..++.++-..++|-+|-..|......
T Consensus 82 ~~g~~~~Ai~~~~~al~l~P~~--~~----~~~~lg~~~~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 82 IKEQFQQAADLYAVAFALGKND--YT----PVFHTGQCQLRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp HTTCHHHHHHHHHHHHHHSSSC--CH----HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHccHHHHHHHHHHHHhhCCCC--cH----HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 9999999999999999887653 22 3446788888899999999999888775
No 58
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=93.29 E-value=2.7 Score=33.93 Aligned_cols=97 Identities=9% Similarity=0.080 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCC-CCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGID-LDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~-vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
......+|.++...|++.+|.+.+...- ... .-...|...+.+|+..|++..|..+.+++...... +.
T Consensus 91 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~--------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--~~- 159 (243)
T 2q7f_A 91 ATAYYGAGNVYVVKEMYKEAKDMFEKALRAGM--------ENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN--DT- 159 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC--------CSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT--CH-
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc--cH-
Confidence 4566778999999999999998887531 111 11357888899999999999999999998776543 22
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
..+..++.++-..++|-+|-..|......
T Consensus 160 ---~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 188 (243)
T 2q7f_A 160 ---EARFQFGMCLANEGMLDEALSQFAAVTEQ 188 (243)
T ss_dssp ---HHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 24556777777788887777777766554
No 59
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=93.28 E-value=4.8 Score=37.64 Aligned_cols=103 Identities=10% Similarity=-0.114 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccC-chHHH
Q 022765 97 IIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSS-QQEVL 175 (292)
Q Consensus 97 ~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~-~~~~L 175 (292)
.....|+.+|...|++.+|.+.+..+- +.. +. -...|...+.+|...|++..|..+++++.....+. .+++.
T Consensus 442 ~~~~~l~~~~~~~g~~~~A~~~~~~~~-~~~-----~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~ 514 (597)
T 2xpi_A 442 LPYLFLGMQHMQLGNILLANEYLQSSY-ALF-----QY-DPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKP 514 (597)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHH-HHC-----CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGG
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH-HhC-----CC-ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhh
Confidence 344567777888888888877776642 110 00 23567788888888888888888888877664321 12222
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 176 NLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 176 kL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
....+.+++.++-..++|-+|-..|......
T Consensus 515 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 515 WAATWANLGHAYRKLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp GHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 2455667777777788888887777776654
No 60
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=93.21 E-value=1.4 Score=35.75 Aligned_cols=105 Identities=10% Similarity=0.024 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCcc-----C---ChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhh
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRV-----I---DDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFL 166 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~-----~---~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~ 166 (292)
+..-..++..+...|+|.+|.+.+... .+...... . ....+...|..++.+|+..+++..|..+++++..+
T Consensus 38 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 117 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKI 117 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 344567899999999999999877642 22111100 0 11124689999999999999999999999999887
Q ss_pred cccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 167 VSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 167 ~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
... + ...+...+.++-..++|-+|-..|......
T Consensus 118 ~p~--~----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 118 DKN--N----VKALYKLGVANMYFGFLEEAKENLYKAASL 151 (198)
T ss_dssp STT--C----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred Ccc--c----HHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 432 2 234456677788888888888777776664
No 61
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=93.16 E-value=0.69 Score=39.09 Aligned_cols=108 Identities=7% Similarity=-0.022 Sum_probs=79.7
Q ss_pred hHhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCc
Q 022765 92 EEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQ 171 (292)
Q Consensus 92 E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~ 171 (292)
....+.....+|..+-..|+|.+|...+..+--... ......+.+...+..|...||+..|..+++++.....+..
T Consensus 11 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p----~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~ 86 (261)
T 3qky_A 11 RHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGR----THEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDP 86 (261)
T ss_dssp CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCS----CSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred CCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC----CCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCc
Confidence 334456677889999999999999999988632211 1124577899999999999999999999999998876532
Q ss_pred hHHHHHHHHHHHHHHHHH--------hhHHHHHHHHHHHHHhh
Q 022765 172 QEVLNLQYKVCYARILDL--------KRKFLEAALRYYDISQI 206 (292)
Q Consensus 172 ~~~LkL~y~~~~ari~d~--------~rkFLeAa~~Y~els~~ 206 (292)
.. -.. +...+.++-. .++|-+|-..|..+...
T Consensus 87 ~~-~~a--~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~ 126 (261)
T 3qky_A 87 RV-PQA--EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDR 126 (261)
T ss_dssp TH-HHH--HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHH
T ss_pred hh-HHH--HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHH
Confidence 21 122 3334556666 78888888888888765
No 62
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=93.16 E-value=0.26 Score=45.94 Aligned_cols=103 Identities=13% Similarity=0.060 Sum_probs=76.7
Q ss_pred HHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc--CchHHHH
Q 022765 99 REKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS--SQQEVLN 176 (292)
Q Consensus 99 r~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~--~~~~~Lk 176 (292)
...+|.+++.+|++.+|-++|... ++.+. ....++.++..+++||..|....|...+++....-.+ ..+..+.
T Consensus 103 ~~~la~i~~~~g~~eeAL~~l~~~-i~~~~----~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l 177 (310)
T 3mv2_B 103 LYLLATAQAILGDLDKSLETCVEG-IDNDE----AEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMI 177 (310)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHH-HTSSC----STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH-hccCC----CcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHH
Confidence 358999999999999999999873 22221 1468999999999999999999999999987554321 1134444
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 177 LQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 177 L~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+..-..++.+.....++=+|-.-|-|++..
T Consensus 178 ~~Laea~v~l~~g~~~~q~A~~~f~El~~~ 207 (310)
T 3mv2_B 178 LNLAESYIKFATNKETATSNFYYYEELSQT 207 (310)
T ss_dssp HHHHHHHHHHHHTCSTTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCccHHHHHHHHHHHHHh
Confidence 444445555555555899998888888775
No 63
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=93.05 E-value=0.66 Score=41.73 Aligned_cols=112 Identities=13% Similarity=-0.010 Sum_probs=88.9
Q ss_pred hHhHHHHHHHHHHHHHhhccHHHHHHHhcc-CCCCCCCccCC-hHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc
Q 022765 92 EEQVLIIREKLADLYESEQQWSKAAQMLSG-IDLDSGMRVID-DTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS 169 (292)
Q Consensus 92 E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~-I~vEt~~~~~~-~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~ 169 (292)
+...+..-..||.+|-..|++.+|...+.. +.+-. ..-+ .......+..++..|...|++..|..+.+++..+...
T Consensus 137 ~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~--~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~ 214 (378)
T 3q15_A 137 DIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQ--NHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMD 214 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH--TSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH--hCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 456788889999999999999999877654 11111 0111 2357888999999999999999999999999998877
Q ss_pred CchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 170 SQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 170 ~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
..++......+..++.++-..++|-+|-..|.+...
T Consensus 215 ~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 215 IQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAK 250 (378)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 677777778888889999999999888888877655
No 64
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=93.02 E-value=1 Score=32.26 Aligned_cols=97 Identities=13% Similarity=0.062 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHH
Q 022765 97 IIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLN 176 (292)
Q Consensus 97 ~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~Lk 176 (292)
.....++.++...|++.+|.+.+...--- .+ .-...|...+.+|...|++..|..+.+++...... +.
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~--~~--- 103 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALEL------DP-RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR--SA--- 103 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CT-TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT--CH---
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHH------CC-CchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC--Ch---
Confidence 34567899999999999999988764211 11 12457888999999999999999999998776543 22
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 177 LQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 177 L~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.....+++++-..++|-+|-..|.+....
T Consensus 104 -~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 104 -EAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp -HHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 23345678888888888888777776553
No 65
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=92.99 E-value=3.6 Score=34.53 Aligned_cols=107 Identities=15% Similarity=-0.017 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhc--------cCchhhHHHHHhhhhhhc
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLE--------DDDAVNAEAFINKASFLV 167 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le--------~~D~~~Ae~~~nK~s~~~ 167 (292)
......|+.+|...|+|.+|...+..+--.. . +...-...+...+..|+. .|++..|..+.+++....
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~-p---~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~ 127 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIY-Q---IDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY 127 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-T---TCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC-C---CCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC
Confidence 4566789999999999999999987641110 0 011335678889999999 999999999999999887
Q ss_pred ccCchHHHHHHH-----------HHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 168 SSSQQEVLNLQY-----------KVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 168 ~~~~~~~LkL~y-----------~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.+......-+.+ ....++++-..++|-+|-..|..+...
T Consensus 128 p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 177 (261)
T 3qky_A 128 PNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDA 177 (261)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 654322111111 156688888999999999999988775
No 66
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=92.77 E-value=0.18 Score=35.69 Aligned_cols=95 Identities=11% Similarity=-0.021 Sum_probs=72.3
Q ss_pred HHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHH
Q 022765 100 EKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQ 178 (292)
Q Consensus 100 ~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~ 178 (292)
..++.++...|++.+|...+... ..+. .....|...+.+|...+++..|..+.+++........+ ..
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~~~~~--------~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~----~~ 77 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQLDP--------EESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYN----KD 77 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHHHCC--------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTC----HH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhCc--------CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccch----HH
Confidence 45788999999999999888653 1111 12457899999999999999999999999877543112 23
Q ss_pred HHHHHHHHHHHh-hHHHHHHHHHHHHHhh
Q 022765 179 YKVCYARILDLK-RKFLEAALRYYDISQI 206 (292)
Q Consensus 179 y~~~~ari~d~~-rkFLeAa~~Y~els~~ 206 (292)
.+...+.++... ++|-+|-..|..+...
T Consensus 78 ~~~~l~~~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 78 VWAAKADALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp HHHHHHHHHTTCSSCSHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHhhc
Confidence 456678888888 8898888888887765
No 67
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=92.69 E-value=3.1 Score=32.95 Aligned_cols=168 Identities=11% Similarity=0.000 Sum_probs=105.1
Q ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcCcccchhHhHHH
Q 022765 18 IEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLI 97 (292)
Q Consensus 18 ~~~y~~ll~~i~~~~~~~~l~~~i~~~~~~~v~lv~sR~~l~~~~~~l~~l~~~~~~~~~~~~L~~i~~~~i~~E~q~a~ 97 (292)
+..|..+.......++.+.-..+++..+...-.-......+........ ..+........++.. .|. ...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~A~~~~~~a~~~-~~~-------~~~ 77 (225)
T 2vq2_A 8 SNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLK--VNDKAQESFRQALSI-KPD-------SAE 77 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHH-CTT-------CHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcC--ChHHHHHHHHHHHHh-CCC-------ChH
Confidence 4455556656666666655544555444222211222222222222222 234445555555543 222 234
Q ss_pred HHHHHHHHHHhh-ccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHH
Q 022765 98 IREKLADLYESE-QQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLN 176 (292)
Q Consensus 98 lr~~LA~i~E~e-~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~Lk 176 (292)
....++.++... |++.+|.+.+...-- .. ........|...+..|...|++..|..+.+++...... +
T Consensus 78 ~~~~l~~~~~~~~~~~~~A~~~~~~~~~-~~----~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~--~---- 146 (225)
T 2vq2_A 78 INNNYGWFLCGRLNRPAESMAYFDKALA-DP----TYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQ--F---- 146 (225)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHT-ST----TCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--C----
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHc-Cc----CCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--C----
Confidence 567899999999 999999998876432 10 11134678899999999999999999999999776543 2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 177 LQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 177 L~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...+..++.++-..++|-+|-..|......
T Consensus 147 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 147 PPAFKELARTKMLAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 234567788888889998888888877664
No 68
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=92.59 E-value=0.78 Score=36.95 Aligned_cols=103 Identities=13% Similarity=0.069 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCc---
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQ--- 171 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~--- 171 (292)
......++.++...|++.+|.+.+... .++. .-...|...+.+|...|++..|..+.+++..+..+..
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~--------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 108 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDK--------HLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLID 108 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEE
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc--------cchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHH
Confidence 456778899999999999998877652 2221 1246788999999999999999999999987664322
Q ss_pred -------hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 172 -------QEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 172 -------~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...-....+...+.++-..++|-+|-..|......
T Consensus 109 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 150 (213)
T 1hh8_A 109 YKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSM 150 (213)
T ss_dssp CGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Confidence 11111234456777788888888888888777664
No 69
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=92.52 E-value=2.6 Score=36.65 Aligned_cols=105 Identities=14% Similarity=0.141 Sum_probs=79.5
Q ss_pred HHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHH
Q 022765 100 EKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQ 178 (292)
Q Consensus 100 ~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~ 178 (292)
...+.+|...|+|.+|...+... .+.. ..-++..-...|..++.+|...|++..|..+.+|+..+.....+......
T Consensus 41 ~~a~~~~~~~g~~~~A~~~~~~al~~~~--~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~ 118 (292)
T 1qqe_A 41 VQAATIYRLRKELNLAGDSFLKAADYQK--KAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGAN 118 (292)
T ss_dssp HHHHHHHHHTTCTHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHH--HhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 44477888999999998877531 1111 00123445789999999999999999999999999998876666665666
Q ss_pred HHHHHHHHHHHh-hHHHHHHHHHHHHHhh
Q 022765 179 YKVCYARILDLK-RKFLEAALRYYDISQI 206 (292)
Q Consensus 179 y~~~~ari~d~~-rkFLeAa~~Y~els~~ 206 (292)
.+.-.+.++... ++|-+|-..|.+-...
T Consensus 119 ~~~~lg~~~~~~lg~~~~A~~~~~~Al~~ 147 (292)
T 1qqe_A 119 FKFELGEILENDLHDYAKAIDCYELAGEW 147 (292)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 777888999887 8998888888776654
No 70
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=92.34 E-value=1.3 Score=34.99 Aligned_cols=98 Identities=10% Similarity=0.052 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhcc-CCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchH
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLSG-IDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQE 173 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~~-I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~ 173 (292)
.+.+-..|+.+|...|+|.+|.+.+.. +.++. .-.+.|...+.+|...|++..|..+..++.....+. .
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p--------~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~--~ 73 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADP--------NNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTS--A 73 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC--H
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchh--H
Confidence 355667789999999999999988876 22222 125688899999999999999999999887766542 1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 174 VLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 174 ~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
......+.+.....+|-.+-..|......
T Consensus 74 ----~~~~~~~~~~~~~~~~~~a~~~~~~a~~~ 102 (184)
T 3vtx_A 74 ----EAYYILGSANFMIDEKQAAIDALQRAIAL 102 (184)
T ss_dssp ----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 22334555666666666666666655543
No 71
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=92.32 E-value=1.1 Score=33.27 Aligned_cols=99 Identities=12% Similarity=-0.022 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
+..-..++.++...|+|.+|...+... .++.. -...|...+.+|+..|++..|..+++++..+..+ +
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~--------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~--~-- 76 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL--------VAVYYTNRALCYLKMQQPEQALADCRRALELDGQ--S-- 76 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--C--
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC--------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCch--h--
Confidence 455577899999999999999988752 22221 2568999999999999999999999999887543 2
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhh
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYYDISQIQK 208 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~~~ 208 (292)
...+..++.++-..++|-+|-..|.......|
T Consensus 77 --~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p 108 (137)
T 3q49_B 77 --VKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 108 (137)
T ss_dssp --HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHCh
Confidence 23556678888888999888888888776543
No 72
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=92.30 E-value=4.6 Score=34.05 Aligned_cols=101 Identities=10% Similarity=-0.086 Sum_probs=68.3
Q ss_pred HHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchH---HH
Q 022765 99 REKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQE---VL 175 (292)
Q Consensus 99 r~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~---~L 175 (292)
...++.++...|++.+|.+.+...--- .+ .....|...+.+|...|++..|..+.+++........+. .-
T Consensus 162 ~~~l~~~~~~~~~~~~A~~~~~~al~~------~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 234 (330)
T 3hym_B 162 MLYIGLEYGLTNNSKLAERFFSQALSI------AP-EDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK 234 (330)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTT------CT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHh------CC-CChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH
Confidence 344788888888888888887653111 11 124678888888888888888888888887776432111 11
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 176 NLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 176 kL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
....+..++.++-..++|-+|-..|......
T Consensus 235 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 235 WEPLLNNLGHVCRKLKKYAEALDYHRQALVL 265 (330)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 2335556777788888888887777777664
No 73
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=92.29 E-value=1.3 Score=33.58 Aligned_cols=98 Identities=10% Similarity=-0.036 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
..+...+|.++...|+|.+|.+.+... .++. .-...|...+..|...|++..|..+++++..+... +..
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~--------~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~--~~~ 116 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDK--------KYIKGYYRRAASNMALGKFRAALRDYETVVKVKPH--DKD 116 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--CHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc--------ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC--CHH
Confidence 455678899999999999999887652 1111 12468999999999999999999999999877543 333
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
....+ ..+...-..++|-+|-..|.....
T Consensus 117 ~~~~~--~~~~~~~~~~~~~~A~~~~~~~~~ 145 (166)
T 1a17_A 117 AKMKY--QECNKIVKQKAFERAIAGDEHKRS 145 (166)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHcccchHH
Confidence 33223 333334456777777776665543
No 74
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=92.21 E-value=0.72 Score=36.25 Aligned_cols=83 Identities=14% Similarity=0.061 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
..+...++.+|...|+|.+|...+... .++. . -...|...+.+|...|++..|..+++++..+..+..+.-
T Consensus 45 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p-------~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 116 (164)
T 3sz7_A 45 PIYLSNRAAAYSASGQHEKAAEDAELATVVDP-------K-YSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDA 116 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-------C-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHH
Confidence 456678999999999999999887652 2222 1 267899999999999999999999999998876654433
Q ss_pred HHHHHHHHHHHH
Q 022765 175 LNLQYKVCYARI 186 (292)
Q Consensus 175 LkL~y~~~~ari 186 (292)
++..+..+..++
T Consensus 117 ~~~~l~~~~~~~ 128 (164)
T 3sz7_A 117 MKRGLETTKRKI 128 (164)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 444444444443
No 75
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=92.15 E-value=0.6 Score=34.38 Aligned_cols=66 Identities=17% Similarity=0.186 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS 169 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~ 169 (292)
......|+.++...|++.+|...+... .++. .-...|...+..|...|++..|..+++++..+...
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p--------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 85 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDP--------TYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQS 85 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC--------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccc
Confidence 456678999999999999999888653 1111 12558889999999999999999999999887654
No 76
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=92.00 E-value=2.7 Score=33.70 Aligned_cols=92 Identities=13% Similarity=0.058 Sum_probs=74.2
Q ss_pred HHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHH
Q 022765 99 REKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQ 178 (292)
Q Consensus 99 r~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~ 178 (292)
...++.++...|+|.+|...+... ++. ....|...+..|...||+..|..+.+++..+... + ..
T Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~a-~~~---------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~--~----~~ 72 (213)
T 1hh8_A 9 LWNEGVLAADKKDWKGALDAFSAV-QDP---------HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH--L----AV 72 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTS-SSC---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--C----HH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHH-cCC---------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc--c----hH
Confidence 356789999999999999999886 222 2468999999999999999999999999877543 2 23
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 179 YKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 179 y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.+...+.++-..++|-+|-..|......
T Consensus 73 ~~~~lg~~~~~~~~~~~A~~~~~~al~~ 100 (213)
T 1hh8_A 73 AYFQRGMLYYQTEKYDLAIKDLKEALIQ 100 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHh
Confidence 4556788888899999998888887664
No 77
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=91.88 E-value=5.8 Score=34.63 Aligned_cols=99 Identities=9% Similarity=-0.038 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChH-HHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDT-FRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~-eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
+.+...++.++...|++.+|.+.+...-- +.+. .....|...+.+|...|++..|..+.+++..+..+. .
T Consensus 177 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~------~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~--~- 247 (365)
T 4eqf_A 177 PGLTRRMSKSPVDSSVLEGVKELYLEAAH------QNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPED--Y- 247 (365)
T ss_dssp ------------CCHHHHHHHHHHHHHHH------HSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC--H-
T ss_pred hHHHHHHHHHHhhhhhHHHHHHHHHHHHH------hCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC--H-
Confidence 44556678899999999999988876411 1111 134578889999999999999999999988775432 2
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
..+..++.++-..++|-+|-..|......
T Consensus 248 ---~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 276 (365)
T 4eqf_A 248 ---SLWNRLGATLANGDRSEEAVEAYTRALEI 276 (365)
T ss_dssp ---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 24566788888888998888888887664
No 78
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=91.87 E-value=1.5 Score=33.77 Aligned_cols=101 Identities=10% Similarity=0.052 Sum_probs=76.7
Q ss_pred HhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCch
Q 022765 93 EQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQ 172 (292)
Q Consensus 93 ~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~ 172 (292)
.........+|..+...|+|.+|...+...-- ..+ .-...|...+..|...|++..|..+.+++..+-.+ +
T Consensus 15 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~------~~p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--~ 85 (142)
T 2xcb_A 15 EDTLEQLYALGFNQYQAGKWDDAQKIFQALCM------LDH-YDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN--E 85 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------HCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--C
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH------hCC-ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC--C
Confidence 34455567789999999999999998876311 111 12468899999999999999999999999887643 2
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 173 EVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 173 ~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+. .+..++.++...++|-+|...|......
T Consensus 86 ~~----~~~~lg~~~~~~g~~~~A~~~~~~al~~ 115 (142)
T 2xcb_A 86 PR----FPFHAAECHLQLGDLDGAESGFYSARAL 115 (142)
T ss_dssp TH----HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cH----HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 22 3455788888889999998888877665
No 79
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=91.71 E-value=0.73 Score=33.27 Aligned_cols=72 Identities=14% Similarity=0.159 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcc
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVS 168 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~ 168 (292)
..+...+|.++...|++.+|...+... ..... ..-........|...+..|...|++..|..+.+++.....
T Consensus 38 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 110 (131)
T 1elr_A 38 MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE-NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR 110 (131)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 355678899999999999999887753 11110 0112223478999999999999999999999999987653
No 80
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=91.28 E-value=2.8 Score=34.57 Aligned_cols=97 Identities=10% Similarity=-0.126 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchH
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQE 173 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~ 173 (292)
.+.....++.++...|++.+|...+... .++. .-...|...+.+|...|++..|..+++++..+....
T Consensus 42 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~--------~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~--- 110 (275)
T 1xnf_A 42 RAQLLYERGVLYDSLGLRALARNDFSQALAIRP--------DMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTY--- 110 (275)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC--------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCC--------CcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccc---
Confidence 3445555666666666666665555431 1111 013355556666666666666666666665543321
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 174 VLNLQYKVCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 174 ~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
...+...+.++-..++|-+|...|.....
T Consensus 111 ---~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 111 ---NYAHLNRGIALYYGGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp ---THHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ---cHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 12333445555555555555555555544
No 81
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=91.11 E-value=0.79 Score=41.45 Aligned_cols=107 Identities=16% Similarity=0.054 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHHHHhhccHHHHHHHhcc-CCCCCCCccCCh-------HHHHHHHHHHHHHHhccCchhhHHHHHhhhhh
Q 022765 94 QVLIIREKLADLYESEQQWSKAAQMLSG-IDLDSGMRVIDD-------TFRLSKCVQIARLYLEDDDAVNAEAFINKASF 165 (292)
Q Consensus 94 q~a~lr~~LA~i~E~e~~~~~AA~~L~~-I~vEt~~~~~~~-------~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~ 165 (292)
..+.....++.++...|+|.+|...+.. +.+.......+. ..+...|...+.+|+..+++..|..+++|+..
T Consensus 145 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 145 EQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3466677889999999999999887754 222221111111 22478999999999999999999999999988
Q ss_pred hcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 166 LVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 166 ~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+..+ + ...+...+.++-..++|=+|-..|......
T Consensus 225 ~~p~--~----~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 259 (336)
T 1p5q_A 225 LDSN--N----EKGLSRRGEAHLAVNDFELARADFQKVLQL 259 (336)
T ss_dssp HCTT--C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hCCC--c----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 7543 2 234456677888888998988888887765
No 82
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=90.88 E-value=6.9 Score=35.79 Aligned_cols=61 Identities=15% Similarity=0.050 Sum_probs=27.8
Q ss_pred HHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhc
Q 022765 100 EKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLV 167 (292)
Q Consensus 100 ~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~ 167 (292)
..++.++...|++.+|...+...---. + .-...|...+.+|...|++..|..+.+++....
T Consensus 348 ~~la~~~~~~g~~~~A~~~~~~~~~~~------~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 408 (537)
T 3fp2_A 348 IQLACLLYKQGKFTESEAFFNETKLKF------P-TLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLE 408 (537)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC------T-TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC------C-CChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcC
Confidence 345555555555555555544321000 0 012244444555555555555555555554444
No 83
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=90.44 E-value=5.9 Score=31.84 Aligned_cols=97 Identities=10% Similarity=-0.130 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCC-CCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGID-LDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~-vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
..+...++.++...|++.+|.+.+...- ... .....|...+..|+..|++..|..+++++.....+ +.
T Consensus 125 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~--~~- 193 (243)
T 2q7f_A 125 GDLFYMLGTVLVKLEQPKLALPYLQRAVELNE--------NDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPG--HA- 193 (243)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTT--CH-
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC--------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc--cH-
Confidence 3456789999999999999999987631 111 12458899999999999999999999999776543 22
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
..+..+++++-..++|-+|-..|......
T Consensus 194 ---~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 222 (243)
T 2q7f_A 194 ---DAFYNAGVTYAYKENREKALEMLDKAIDI 222 (243)
T ss_dssp ---HHHHHHHHHHHHTTCTTHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHccCHHHHHHHHHHHHcc
Confidence 24567788888888888888888777664
No 84
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=90.36 E-value=5 Score=33.18 Aligned_cols=94 Identities=23% Similarity=0.051 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVL 175 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~L 175 (292)
......++.++...|++.+|...+... -.++ .-.+.|...+.+|...|++..|..+.+++..+-.+ +.+
T Consensus 118 ~~~~~~lg~~~~~~g~~~~A~~~~~~a------l~~~--~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~--~~~- 186 (217)
T 2pl2_A 118 APLHLQRGLVYALLGERDKAEASLKQA------LALE--DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPK--DLD- 186 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH------HHHC--CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT--CHH-
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHH------Hhcc--cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--ChH-
Confidence 445667889999999999998887652 1111 22457888899999999999999999998776543 222
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 022765 176 NLQYKVCYARILDLKRKFLEAALRYYDI 203 (292)
Q Consensus 176 kL~y~~~~ari~d~~rkFLeAa~~Y~el 203 (292)
.+...+.++...++|=+|...|..+
T Consensus 187 ---~~~~la~~~~~~g~~~~A~~~~~~~ 211 (217)
T 2pl2_A 187 ---LRVRYASALLLKGKAEEAARAAALE 211 (217)
T ss_dssp ---HHHHHHHHHTC--------------
T ss_pred ---HHHHHHHHHHHccCHHHHHHHHHHH
Confidence 2334567777777777776666554
No 85
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=90.35 E-value=3.2 Score=36.64 Aligned_cols=111 Identities=8% Similarity=-0.092 Sum_probs=84.7
Q ss_pred HhHHHHHHHHHHHHHhhccHHHHHHHhcc-CCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCc
Q 022765 93 EQVLIIREKLADLYESEQQWSKAAQMLSG-IDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQ 171 (292)
Q Consensus 93 ~q~a~lr~~LA~i~E~e~~~~~AA~~L~~-I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~ 171 (292)
...+.+...++.++-..|++.+|...+.. +..-. .-++......+.-.+..|...||+..|..+..++..+.....
T Consensus 11 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~---~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 87 (373)
T 1hz4_A 11 TMHAEFNALRAQVAINDGNPDEAERLAKLALEELP---PGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHD 87 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCC---TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCC---CCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcC
Confidence 44566777889999999999999888554 11111 112344666788888999999999999999999998887766
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 172 QEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 172 ~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+...........+.++-..++|-+|-..|.+....
T Consensus 88 ~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~ 122 (373)
T 1hz4_A 88 VWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQL 122 (373)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 66666677778888888899998888888776553
No 86
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=90.30 E-value=3.6 Score=29.18 Aligned_cols=64 Identities=14% Similarity=0.074 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhc
Q 022765 97 IIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLV 167 (292)
Q Consensus 97 ~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~ 167 (292)
.....++.++...|++.+|.+.+...---. + .....+...++.|...|++..|..+.+++....
T Consensus 70 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~------~-~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 133 (136)
T 2fo7_A 70 EAWYNLGNAYYKQGDYDEAIEYYQKALELD------P-RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD 133 (136)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHC------T-TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC------C-CChHHHHHHHHHHHHHccHHHHHHHHHHHHccC
Confidence 455678999999999999999887631111 1 124578889999999999999999999886543
No 87
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=90.19 E-value=7.5 Score=32.66 Aligned_cols=105 Identities=9% Similarity=-0.005 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCC-CCC-CCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGID-LDS-GMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQE 173 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~-vEt-~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~ 173 (292)
..+...++.++...|+|.+|...+...- ... .............|...+.+|...|++..|..+.+++..+..+.
T Consensus 193 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~--- 269 (330)
T 3hym_B 193 PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQN--- 269 (330)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---
T ss_pred hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccc---
Confidence 4566789999999999999998876531 110 01111223345799999999999999999999999998775432
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 174 VLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 174 ~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...+..+++++...++|-+|...|......
T Consensus 270 ---~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 299 (330)
T 3hym_B 270 ---ASTYSAIGYIHSLMGNFENAVDYFHTALGL 299 (330)
T ss_dssp ---SHHHHHHHHHHHHHTCHHHHHHHHHTTTTT
T ss_pred ---hHHHHHHHHHHHHhccHHHHHHHHHHHHcc
Confidence 234556788888899999988888877664
No 88
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=90.09 E-value=6.8 Score=31.96 Aligned_cols=99 Identities=11% Similarity=0.010 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
.......++.++...|++.+|.+.+...- +. .+ .-...|...+.+|...|++..|..+++++...... +.
T Consensus 140 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~-~~-----~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~--~~- 209 (252)
T 2ho1_A 140 RSRVFENLGLVSLQMKKPAQAKEYFEKSL-RL-----NR-NQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQ--NA- 209 (252)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HH-----CS-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCC--CH-
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHH-hc-----Cc-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC--cH-
Confidence 45667789999999999999999987631 11 11 12568899999999999999999999998765442 22
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
..+...++++...+++-+|...|..+...
T Consensus 210 ---~~~~~~~~~~~~~g~~~~A~~~~~~~~~~ 238 (252)
T 2ho1_A 210 ---RSLLLGIRLAKVFEDRDTAASYGLQLKRL 238 (252)
T ss_dssp ---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 23556777788888888888877777664
No 89
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=89.84 E-value=1.2 Score=31.95 Aligned_cols=66 Identities=18% Similarity=0.046 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcc
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVS 168 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~ 168 (292)
......+|.++...|++.+|.+.+...-- ..+. -...|...+.+|...|++..|..+++++.....
T Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p 111 (131)
T 2vyi_A 46 AVYFCNRAAAYSKLGNYAGAVQDCERAIC------IDPA-YSKAYGRMGLALSSLNKHVEAVAYYKKALELDP 111 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------HCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHh------cCcc-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCc
Confidence 44567889999999999999998876311 1111 146889999999999999999999999987754
No 90
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=89.78 E-value=2.1 Score=32.44 Aligned_cols=94 Identities=11% Similarity=-0.089 Sum_probs=71.7
Q ss_pred HHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHH
Q 022765 100 EKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQY 179 (292)
Q Consensus 100 ~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y 179 (292)
..++..+...|++.+|...+...- ...+ .-.+.|...+.++...|++..|...++|+..+-.+ +.+ .
T Consensus 21 ~~~g~~~~~~g~~~~A~~~~~~al------~~~P-~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~--~~~----~ 87 (121)
T 1hxi_A 21 MEEGLSMLKLANLAEAALAFEAVC------QKEP-EREEAWRSLGLTQAENEKDGLAIIALNHARMLDPK--DIA----V 87 (121)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH------HHST-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHH----H
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHH------HHCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHH----H
Confidence 457888999999999999887631 1111 13568899999999999999999999999887654 222 3
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 180 KVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 180 ~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+...+.++...++|-+|-..|......
T Consensus 88 ~~~la~~~~~~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 88 HAALAVSHTNEHNANAALASLRAWLLS 114 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 456777888888998988888877654
No 91
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=89.67 E-value=3.4 Score=28.07 Aligned_cols=70 Identities=14% Similarity=0.092 Sum_probs=53.8
Q ss_pred CChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 131 IDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 131 ~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+++......|..++..|...+++..|..+.+++...... +. ..+..++.++-..++|-+|...|......
T Consensus 3 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~--~~----~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 3 MDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN--NA----EAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp ---CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CcccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC--CH----HHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 455567789999999999999999999999999876543 22 23456778888888898888888877664
No 92
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=89.64 E-value=6 Score=30.67 Aligned_cols=105 Identities=11% Similarity=-0.023 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CC-------CCCCc---cCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhh
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DL-------DSGMR---VIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKAS 164 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~v-------Et~~~---~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s 164 (292)
+..-..++..+-..|+|.+|....... .+ ++... .-.+.....+|...+..|+..|++..|..+++++.
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 344456788888899999998766541 11 00000 00034467899999999999999999999999998
Q ss_pred hhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 165 FLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 165 ~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.+-.. + ...+...+.++-..++|-+|-..|......
T Consensus 91 ~~~p~--~----~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 91 KREET--N----EKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHSTT--C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hcCCc--c----hHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 87432 2 234455677788888888888888877664
No 93
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=89.53 E-value=2.3 Score=33.49 Aligned_cols=100 Identities=11% Similarity=-0.001 Sum_probs=75.8
Q ss_pred HhHHHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCc
Q 022765 93 EQVLIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQ 171 (292)
Q Consensus 93 ~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~ 171 (292)
.........++..+...|++.+|...+... ..+. .-...|...+..|...|++..|..+.+++..+-.+
T Consensus 18 p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p--------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-- 87 (148)
T 2vgx_A 18 SDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDH--------YDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIX-- 87 (148)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--
T ss_pred HhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCc--------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC--
Confidence 344555677899999999999999988753 1111 12467889999999999999999999999877543
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 172 QEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 172 ~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+.. .+..++.++...++|=+|-..|......
T Consensus 88 ~~~----~~~~lg~~~~~~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 88 EPR----FPFHAAECLLQXGELAEAESGLFLAQEL 118 (148)
T ss_dssp CTH----HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred Cch----HHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 222 2345688888889998888888877664
No 94
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=89.33 E-value=6.8 Score=30.87 Aligned_cols=97 Identities=14% Similarity=-0.030 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
...+...++.++...|++.+|...+...- +. .+ .....|...+.+|+..|++..|..+.+++...... .+..
T Consensus 112 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~-~~-----~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~ 183 (225)
T 2vq2_A 112 PYIANLNKGICSAKQGQFGLAEAYLKRSL-AA-----QP-QFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEV-LQAD 183 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HH-----ST-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCS-CCHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHH-Hh-----CC-CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CCHH
Confidence 35567889999999999999999887631 11 11 12568999999999999999999999999876541 1222
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYYDIS 204 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~els 204 (292)
. +...+.+....+++- ++..|.+..
T Consensus 184 ~----~~~~~~~~~~~~~~~-~a~~~~~~~ 208 (225)
T 2vq2_A 184 D----LLLGWKIAKALGNAQ-AAYEYEAQL 208 (225)
T ss_dssp H----HHHHHHHHHHTTCHH-HHHHHHHHH
T ss_pred H----HHHHHHHHHhcCcHH-HHHHHHHHH
Confidence 1 234555555555554 445554443
No 95
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=89.21 E-value=4.9 Score=37.03 Aligned_cols=105 Identities=14% Similarity=0.014 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCC-CCC--------CccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhh
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDL-DSG--------MRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFL 166 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~v-Et~--------~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~ 166 (292)
+.....+|..+...|+|.+|.+.+...-- ... ...-.+......|...+.+|+..+++..|..+++++..+
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 44456789999999999999887764210 000 000023457889999999999999999999999999876
Q ss_pred cccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 167 VSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 167 ~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
-.+ + ...+...+.++-..++|-+|-..|......
T Consensus 303 ~p~--~----~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l 336 (370)
T 1ihg_A 303 DPS--N----TKALYRRAQGWQGLKEYDQALADLKKAQEI 336 (370)
T ss_dssp CTT--C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred Cch--h----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 432 2 223445667777788888888777777664
No 96
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=89.09 E-value=2.3 Score=35.84 Aligned_cols=99 Identities=13% Similarity=0.014 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVL 175 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~L 175 (292)
..+...++.++...|++.+|.+.+...- +. .+ .-...|...+..|...|++..|..+.+++.....+ +.
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~-~~-----~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~--~~-- 240 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAV-EL-----RP-DDAQLWNKLGATLANGNRPQEALDAYNRALDINPG--YV-- 240 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH-HH-----CT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CH--
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHH-Hh-----CC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--CH--
Confidence 5667789999999999999999887631 11 11 12468999999999999999999999999776543 22
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh
Q 022765 176 NLQYKVCYARILDLKRKFLEAALRYYDISQIQ 207 (292)
Q Consensus 176 kL~y~~~~ari~d~~rkFLeAa~~Y~els~~~ 207 (292)
..+...++++-..++|-+|-..|.......
T Consensus 241 --~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 270 (327)
T 3cv0_A 241 --RVMYNMAVSYSNMSQYDLAAKQLVRAIYMQ 270 (327)
T ss_dssp --HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 234567888888999999988888877653
No 97
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=88.90 E-value=1.2 Score=32.48 Aligned_cols=70 Identities=14% Similarity=0.137 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQE 173 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~ 173 (292)
......|+.++...|+|.+|...+... .++.. -...|...+..|...|++..|..+.+|+..+.....+.
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 77 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPD--------YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQ 77 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCch
Confidence 456678999999999999999988763 22221 13488999999999999999999999998876543333
No 98
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=88.74 E-value=2.2 Score=37.31 Aligned_cols=100 Identities=10% Similarity=0.060 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVL 175 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~L 175 (292)
..+...|+.++...|++.+|.+.+...- .+.+ .-...|...+.+|...|++..|..+.+++..+..+.
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al------~~~p-~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~----- 280 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAAL------TVRP-EDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGF----- 280 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHH------HHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHH------HhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc-----
Confidence 4456789999999999999999887631 1111 124589999999999999999999999998775432
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhh
Q 022765 176 NLQYKVCYARILDLKRKFLEAALRYYDISQIQK 208 (292)
Q Consensus 176 kL~y~~~~ari~d~~rkFLeAa~~Y~els~~~~ 208 (292)
...+...+.++-..++|-+|...|.......+
T Consensus 281 -~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 312 (365)
T 4eqf_A 281 -IRSRYNLGISCINLGAYREAVSNFLTALSLQR 312 (365)
T ss_dssp -HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCc
Confidence 33456678888889999999999988877543
No 99
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=88.74 E-value=4.1 Score=38.87 Aligned_cols=97 Identities=13% Similarity=0.070 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
......||.++...|++.+|.+.+... .++. .-.+.|...+.+|...|++..|..+.+++..+..+ +
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p--------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--~-- 90 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHP--------GHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE--H-- 90 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTST--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--C--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC--C--
Confidence 345566777888888888887776552 2221 12456777788888888888888888877766432 2
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...+..++.++-..++|-+|-..|......
T Consensus 91 --~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 120 (568)
T 2vsy_A 91 --PGIALWLGHALEDAGQAEAAAAAYTRAHQL 120 (568)
T ss_dssp --HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 123345566666677776666666665553
No 100
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=88.73 E-value=10 Score=32.10 Aligned_cols=109 Identities=15% Similarity=0.068 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCC-CCCCCc----cCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccC
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGID-LDSGMR----VIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSS 170 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~-vEt~~~----~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~ 170 (292)
......++.++...|++.+|.+.+...- ...... .+..-.++...+..+..++..|++..|..+.+++.....+
T Consensus 188 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~- 266 (359)
T 3ieg_A 188 TEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS- 266 (359)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-
Confidence 3566789999999999999999886531 111100 0001113344566799999999999999999999887654
Q ss_pred chHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 171 QQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 171 ~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+.......+..++.++...++|-+|-..|......
T Consensus 267 -~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 267 -VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQM 301 (359)
T ss_dssp -SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 56666677788999999999999999999888775
No 101
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=88.70 E-value=13 Score=33.19 Aligned_cols=109 Identities=14% Similarity=0.062 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCC-CCCCCcc----CChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccC
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGID-LDSGMRV----IDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSS 170 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~-vEt~~~~----~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~ 170 (292)
......++.+|...|++.+|...+...- ++..... +..-.+...++..+..|...|++..|..+.+++..+..
T Consensus 211 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p-- 288 (450)
T 2y4t_A 211 TEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEP-- 288 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC--
Confidence 4556789999999999999999887642 1111000 00111333446679999999999999999999987654
Q ss_pred chHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 171 QQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 171 ~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+++......+.+++.++...++|-+|-..|......
T Consensus 289 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 324 (450)
T 2y4t_A 289 SIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQM 324 (450)
T ss_dssp SSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 366667778889999999999999998888887654
No 102
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=88.58 E-value=1.6 Score=41.99 Aligned_cols=114 Identities=16% Similarity=0.187 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcCcccchhHhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCC---Ccc
Q 022765 54 SRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSG---MRV 130 (292)
Q Consensus 54 sR~~l~~~~~~l~~l~~~~~~~~~~~~L~~i~~~~i~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~---~~~ 130 (292)
+++.+..+-..=...+-+........+|..-..---.-=..++.....||.+|...|+|.+|....... ++.. .|.
T Consensus 298 ~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~a-L~i~~~~lG~ 376 (433)
T 3qww_A 298 ARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKI-IKPYSKHYPV 376 (433)
T ss_dssp HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHHHHHSCS
T ss_pred HHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHH-HHHHHHHcCC
Confidence 444454443332223445667777777775433222233457888899999999999999999877642 1111 112
Q ss_pred CChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc
Q 022765 131 IDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS 169 (292)
Q Consensus 131 ~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~ 169 (292)
+.-.-...|-+++.+|...|++..|+.+..||..+...
T Consensus 377 -~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 377 -YSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp -SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred -CChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 12245678889999999999999999999999887753
No 103
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=88.50 E-value=2.4 Score=38.42 Aligned_cols=100 Identities=11% Similarity=0.050 Sum_probs=70.9
Q ss_pred hHhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCc
Q 022765 92 EEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQ 171 (292)
Q Consensus 92 E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~ 171 (292)
..........++.++...|++.+|...+...- ...+. ...|...+..|...|++..|..+.+++.......
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l------~~~~~--~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~- 303 (514)
T 2gw1_A 233 KEKLAISLEHTGIFKFLKNDPLGAHEDIKKAI------ELFPR--VNSYIYMALIMADRNDSTEYYNYFDKALKLDSNN- 303 (514)
T ss_dssp HHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHH------HHCCC--HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTC-
T ss_pred ChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH------hhCcc--HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCC-
Confidence 45667778889999999999999999887631 12222 7788888888888888888888888887654332
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 172 QEVLNLQYKVCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 172 ~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
.+ .+...+.++-..++|-+|-..|.....
T Consensus 304 -~~----~~~~l~~~~~~~~~~~~A~~~~~~~~~ 332 (514)
T 2gw1_A 304 -SS----VYYHRGQMNFILQNYDQAGKDFDKAKE 332 (514)
T ss_dssp -TH----HHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred -HH----HHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 11 344556666666677666666666554
No 104
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=88.49 E-value=1.9 Score=40.79 Aligned_cols=107 Identities=15% Similarity=0.090 Sum_probs=77.4
Q ss_pred hHHHHHHHHHHHHHhhccHHHHHHHhcc-CCCCCCCccCChH-------HHHHHHHHHHHHHhccCchhhHHHHHhhhhh
Q 022765 94 QVLIIREKLADLYESEQQWSKAAQMLSG-IDLDSGMRVIDDT-------FRLSKCVQIARLYLEDDDAVNAEAFINKASF 165 (292)
Q Consensus 94 q~a~lr~~LA~i~E~e~~~~~AA~~L~~-I~vEt~~~~~~~~-------eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~ 165 (292)
..+.....++.++...|+|.+|...+.. |.+.......+++ .+...|...+.+|+..+++..|..+++|+..
T Consensus 266 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 3455667789999999999999887653 2222111112222 2478999999999999999999999999988
Q ss_pred hcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 166 LVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 166 ~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+-.+ + ...+...+.++-..++|=+|-..|......
T Consensus 346 ~~p~--~----~~a~~~~g~a~~~~g~~~~A~~~~~~al~l 380 (457)
T 1kt0_A 346 LDSA--N----EKGLYRRGEAQLLMNEFESAKGDFEKVLEV 380 (457)
T ss_dssp HSTT--C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred cCCc--c----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 7543 2 233445677778888998888888887664
No 105
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=88.16 E-value=1 Score=33.12 Aligned_cols=68 Identities=6% Similarity=0.007 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhhccHHHHHHHhccCC-CCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc
Q 022765 97 IIREKLADLYESEQQWSKAAQMLSGID-LDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS 169 (292)
Q Consensus 97 ~lr~~LA~i~E~e~~~~~AA~~L~~I~-vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~ 169 (292)
.....++.++...|++.+|...+..+- .... .....+.+...+..|...|++..|..+.+++.....+
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-----~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~ 108 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPT-----HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPG 108 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-----CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 456778999999999999999887641 1111 1123568899999999999999999999999887754
No 106
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=88.02 E-value=2.3 Score=35.87 Aligned_cols=100 Identities=11% Similarity=0.052 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
......++.++...|++.+|.+.+... .... .....|...+++|+..|++..|..+.+++.....+..+..
T Consensus 206 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~--------~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 277 (327)
T 3cv0_A 206 AQLWNKLGATLANGNRPQEALDAYNRALDINP--------GYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPT 277 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC--------CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcccccc
Confidence 455678899999999999999988763 1111 1245788999999999999999999999988776532211
Q ss_pred ------HHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 022765 175 ------LNLQYKVCYARILDLKRKFLEAALRYYDI 203 (292)
Q Consensus 175 ------LkL~y~~~~ari~d~~rkFLeAa~~Y~el 203 (292)
.....+..+++++...+++=+|...|...
T Consensus 278 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 312 (327)
T 3cv0_A 278 GEASREATRSMWDFFRMLLNVMNRPDLVELTYAQN 312 (327)
T ss_dssp ---CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTCC
T ss_pred ccchhhcCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 14556677888888888888777766543
No 107
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=87.94 E-value=2.3 Score=35.26 Aligned_cols=98 Identities=9% Similarity=-0.082 Sum_probs=65.5
Q ss_pred HHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHH
Q 022765 98 IREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNL 177 (292)
Q Consensus 98 lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL 177 (292)
....++.++...|++.+|.+.+...-- .+ -+.......|...+.+|...|++..|..+.+++........
T Consensus 39 ~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~---~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~------ 108 (272)
T 3u4t_A 39 IYNRRAVCYYELAKYDLAQKDIETYFS-KV---NATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRL------ 108 (272)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHT-TS---CTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT------
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHh-cc---CchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccH------
Confidence 345678888888999888887765422 11 12234566788888888888888888888888877654321
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 178 QYKVCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 178 ~y~~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
..+...+.++-..++|-+|-..|.....
T Consensus 109 ~~~~~l~~~~~~~~~~~~A~~~~~~al~ 136 (272)
T 3u4t_A 109 DMYGQIGSYFYNKGNFPLAIQYMEKQIR 136 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHhh
Confidence 2344566666667777777666655544
No 108
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=87.83 E-value=5.5 Score=36.37 Aligned_cols=103 Identities=15% Similarity=0.059 Sum_probs=78.1
Q ss_pred hhHhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccC
Q 022765 91 FEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSS 170 (292)
Q Consensus 91 ~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~ 170 (292)
--.++..++..+|..+-..|++.+|.+.+..+.... ..++..|+ .+.+|++.++|..|..++.++....
T Consensus 97 ~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~-------p~~~~~~~-~a~l~~~~~r~~dA~~~l~~a~~~~--- 165 (282)
T 4f3v_A 97 PVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAG-------SEHLVAWM-KAVVYGAAERWTDVIDQVKSAGKWP--- 165 (282)
T ss_dssp ECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTT-------CHHHHHHH-HHHHHHHTTCHHHHHHHHTTGGGCS---
T ss_pred ccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-------CchHHHHH-HHHHHHHcCCHHHHHHHHHHhhccC---
Confidence 346788999999999999999999999999976522 13443344 4459999999999999998664432
Q ss_pred chHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 171 QQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 171 ~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
++.+.-.-+...+.++..-++|=+|-.+|.....
T Consensus 166 -d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~ 199 (282)
T 4f3v_A 166 -DKFLAGAAGVAHGVAAANLALFTEAERRLTEAND 199 (282)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred -CcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 3333333445558889999999999999998865
No 109
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=87.78 E-value=12 Score=31.70 Aligned_cols=99 Identities=10% Similarity=0.069 Sum_probs=77.6
Q ss_pred HHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHH
Q 022765 99 REKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQ 178 (292)
Q Consensus 99 r~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~ 178 (292)
...+|.++...|++.+|.+.+...--.. +-+.......|...+..|...|++..|..+++++.....+ + ..
T Consensus 237 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~---~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~--~----~~ 307 (359)
T 3ieg_A 237 LIESAEELIRDGRYTDATSKYESVMKTE---PSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPD--N----VN 307 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC---CSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--C----HH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcC---CCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc--c----HH
Confidence 3456889999999999999988642211 1144556678899999999999999999999999877432 2 23
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 179 YKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 179 y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.+...+.++-..++|-+|-..|......
T Consensus 308 ~~~~~~~~~~~~g~~~~A~~~~~~a~~~ 335 (359)
T 3ieg_A 308 ALKDRAEAYLIEEMYDEAIQDYEAAQEH 335 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 5667888888999999999999888775
No 110
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.76 E-value=19 Score=34.41 Aligned_cols=90 Identities=11% Similarity=0.104 Sum_probs=73.1
Q ss_pred HHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHH
Q 022765 116 AQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLE 195 (292)
Q Consensus 116 A~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLe 195 (292)
..++..+.-=|.++.+=..++.++..+.+.+|.+.||+..|-..+..+..-.+...+...++.|+..++|+.-..++|..
T Consensus 116 ~~~i~~l~~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~ 195 (445)
T 4b4t_P 116 ISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQ 195 (445)
T ss_dssp HHHHHCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHH
Confidence 34444444334444444567889999999999999999999999999877767777889999999999999999999999
Q ss_pred HHHHHHHHHh
Q 022765 196 AALRYYDISQ 205 (292)
Q Consensus 196 Aa~~Y~els~ 205 (292)
|---+..++.
T Consensus 196 a~~~~~ki~~ 205 (445)
T 4b4t_P 196 ATVLSRKILK 205 (445)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9888877765
No 111
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=87.65 E-value=7.2 Score=32.21 Aligned_cols=105 Identities=12% Similarity=-0.016 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHhhccHHHHHHHhccCC-CCCCCccCChHHHHHHHHHHH------------------HHHhccCchhhHH
Q 022765 97 IIREKLADLYESEQQWSKAAQMLSGID-LDSGMRVIDDTFRLSKCVQIA------------------RLYLEDDDAVNAE 157 (292)
Q Consensus 97 ~lr~~LA~i~E~e~~~~~AA~~L~~I~-vEt~~~~~~~~eKl~~~l~i~------------------rL~Le~~D~~~Ae 157 (292)
.....++.++...|+|.+|...+..+- .... .-. -...+...+ ..++..|++.+|.
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~--~~~---~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~ 116 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT--HPN---IDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAF 116 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CTT---HHHHHHHHHHHHHHHHC--------------CCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC--CCc---HHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHH
Confidence 455678999999999999999887742 1111 111 011222333 3344578999999
Q ss_pred HHHhhhhhhcccCch-HHHH----------HHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 158 AFINKASFLVSSSQQ-EVLN----------LQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 158 ~~~nK~s~~~~~~~~-~~Lk----------L~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.+.+++.....+... .+.. -.+....++++-.+++|-+|...|..+...
T Consensus 117 ~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~ 176 (225)
T 2yhc_A 117 SDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRD 176 (225)
T ss_dssp HHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 999999988876432 1111 123346688888999999999999998875
No 112
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=87.32 E-value=2.1 Score=35.49 Aligned_cols=97 Identities=15% Similarity=0.020 Sum_probs=76.2
Q ss_pred HHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHH
Q 022765 99 REKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNL 177 (292)
Q Consensus 99 r~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL 177 (292)
...+|..+-..|++.+|.+.+... ..+.. ....|...+..|...|++..|..+++++.... ++++...
T Consensus 6 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~--------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~---~~~~~~~ 74 (272)
T 3u4t_A 6 EFRYADFLFKNNNYAEAIEVFNKLEAKKYN--------SPYIYNRRAVCYYELAKYDLAQKDIETYFSKV---NATKAKS 74 (272)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHTTCC--------CSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTS---CTTTCCH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCC--------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcc---CchhHHH
Confidence 356789999999999999998864 22221 12378889999999999999999999998732 3445555
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 178 QYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 178 ~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.-+...+.++-..++|-+|-..|......
T Consensus 75 ~~~~~lg~~~~~~~~~~~A~~~~~~a~~~ 103 (272)
T 3u4t_A 75 ADFEYYGKILMKKGQDSLAIQQYQAAVDR 103 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 55678889999999999998888887775
No 113
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=87.27 E-value=3 Score=39.75 Aligned_cols=112 Identities=10% Similarity=-0.059 Sum_probs=75.8
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHhhcCcccchhHhHHHHHHHHHHHHHhhccHHHHHHHhccC---CCCCCCccCC
Q 022765 56 QLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGI---DLDSGMRVID 132 (292)
Q Consensus 56 ~~l~~~~~~l~~l~~~~~~~~~~~~L~~i~~~~i~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I---~vEt~~~~~~ 132 (292)
.++..+...-.+-.-+........+|..-..---.--..++.....||.+|...|+|.+|....... -...+ |...
T Consensus 289 ~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~l-g~~H 367 (429)
T 3qwp_A 289 ESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFF-PGSH 367 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHS-CSSC
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHc-CCCC
Confidence 3333333333344556667777777764332212222357888999999999999999998876632 11111 2222
Q ss_pred hHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc
Q 022765 133 DTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS 169 (292)
Q Consensus 133 ~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~ 169 (292)
-.-...+.+++.+|...|++..|+.+.+|+..+...
T Consensus 368 -p~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 368 -PVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp -HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 245778999999999999999999999999887753
No 114
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=87.23 E-value=2.9 Score=37.92 Aligned_cols=97 Identities=11% Similarity=0.011 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVL 175 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~L 175 (292)
+..-..++..+-..|+|.+|.+.+...--. .+ ....|...+..|+..|++..|..+++++..+..+ +
T Consensus 6 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~------~p--~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~--~--- 72 (514)
T 2gw1_A 6 ALALKDKGNQFFRNKKYDDAIKYYNWALEL------KE--DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPD--Y--- 72 (514)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHH------CC--CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSC--C---
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhc------Cc--cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChH--H---
Confidence 444567899999999999999998874211 12 1578999999999999999999999999876543 2
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 176 NLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 176 kL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...+...++++-..++|=+|-..|..+...
T Consensus 73 -~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 102 (514)
T 2gw1_A 73 -SKVLLRRASANEGLGKFADAMFDLSVLSLN 102 (514)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHS
T ss_pred -HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 244566889999999999999999888764
No 115
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=87.18 E-value=8.2 Score=36.77 Aligned_cols=97 Identities=12% Similarity=0.027 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
......|+.+|...|++.+|.+.+... .++. + -.+.|...+.+|...|++..|..+.+++..+..+ +.
T Consensus 57 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-------~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~--~~- 125 (568)
T 2vsy_A 57 PEAVARLGRVRWTQQRHAEAAVLLQQASDAAP-------E-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPE--EP- 125 (568)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CH-
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC-------C-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CH-
Confidence 456678999999999999999888752 1211 1 2568899999999999999999999999877543 22
Q ss_pred HHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHhh
Q 022765 175 LNLQYKVCYARILDLK---RKFLEAALRYYDISQI 206 (292)
Q Consensus 175 LkL~y~~~~ari~d~~---rkFLeAa~~Y~els~~ 206 (292)
..+..++.++... +++-+|...|.+....
T Consensus 126 ---~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~ 157 (568)
T 2vsy_A 126 ---YITAQLLNWRRRLCDWRALDVLSAQVRAAVAQ 157 (568)
T ss_dssp ---HHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHhhccccHHHHHHHHHHHHhc
Confidence 2344566777777 8888888888887765
No 116
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=87.13 E-value=3.2 Score=34.19 Aligned_cols=97 Identities=7% Similarity=-0.119 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVL 175 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~L 175 (292)
......||.++...|+|.+|.+.+...-- +.+ .-...|...+.+|...|++..|..+++++..+..+. ...
T Consensus 77 ~~~~~~la~~~~~~~~~~~A~~~~~~al~------~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~ 147 (275)
T 1xnf_A 77 PEVFNYLGIYLTQAGNFDAAYEAFDSVLE------LDP-TYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPND--PFR 147 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------HCT-TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHh------cCc-cccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC--hHH
Confidence 44567899999999999999998876311 111 124689999999999999999999999998865432 222
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 176 NLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 176 kL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.+ ...+....++|-+|-..|......
T Consensus 148 ~~-----~~~~~~~~~~~~~A~~~~~~~~~~ 173 (275)
T 1xnf_A 148 SL-----WLYLAEQKLDEKQAKEVLKQHFEK 173 (275)
T ss_dssp HH-----HHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HH-----HHHHHHHhcCHHHHHHHHHHHHhc
Confidence 22 112234456777777777555543
No 117
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=87.02 E-value=2.9 Score=30.93 Aligned_cols=82 Identities=16% Similarity=0.068 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccC---c
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSS---Q 171 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~---~ 171 (292)
......++.++...|+|.+|...+... .++. .-...|...+.+|...|++..|..+++++..+..+. -
T Consensus 43 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p--------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 114 (137)
T 3q49_B 43 AVYYTNRALCYLKMQQPEQALADCRRALELDG--------QSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNF 114 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc--------hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHH
Confidence 456678999999999999999887653 1111 135689999999999999999999999998877542 1
Q ss_pred hHHHHHHHHHHHHH
Q 022765 172 QEVLNLQYKVCYAR 185 (292)
Q Consensus 172 ~~~LkL~y~~~~ar 185 (292)
+.++.-....+..+
T Consensus 115 ~~~~~~~l~~~~~~ 128 (137)
T 3q49_B 115 GDDIPSALRIAKKK 128 (137)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444444333
No 118
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=86.94 E-value=14 Score=31.76 Aligned_cols=98 Identities=11% Similarity=0.056 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
+.+...++.++...|++.+|...+... .+.. .-...|...+.+|...|++..|..+.+++..+..+ +
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~--------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~--~-- 284 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRP--------NDYLLWNKLGATLANGNQSEEAVAAYRRALELQPG--Y-- 284 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--C--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc--------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--c--
Confidence 456677888999999999998887652 1111 11457888899999999999999999988776432 1
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYYDISQIQ 207 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~~ 207 (292)
...+...+.++-..++|-+|-..|.......
T Consensus 285 --~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 315 (368)
T 1fch_A 285 --IRSRYNLGISCINLGAHREAVEHFLEALNMQ 315 (368)
T ss_dssp --HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 2345667888888888888888887776653
No 119
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=86.68 E-value=6 Score=37.36 Aligned_cols=97 Identities=8% Similarity=-0.022 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhcc---------CchhhHHHHHhhhhhh
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLED---------DDAVNAEAFINKASFL 166 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~---------~D~~~Ae~~~nK~s~~ 166 (292)
......|+.+|...|++.+|.+.+... -.+.++ ...|...+.+|... +++..|..+.+++..+
T Consensus 137 ~~a~~~lg~~~~~~g~~~~A~~~~~~a------l~~~p~--~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 208 (474)
T 4abn_A 137 VEAWNQLGEVYWKKGDVTSAHTCFSGA------LTHCKN--KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM 208 (474)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHH------HTTCCC--HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH------HhhCCC--HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh
Confidence 456778999999999999999988763 122333 37899999999999 9999999999999887
Q ss_pred cccCchHHHHHHHHHHHHHHHHHh--------hHHHHHHHHHHHHHhh
Q 022765 167 VSSSQQEVLNLQYKVCYARILDLK--------RKFLEAALRYYDISQI 206 (292)
Q Consensus 167 ~~~~~~~~LkL~y~~~~ari~d~~--------rkFLeAa~~Y~els~~ 206 (292)
..+ +.. .+...+.++... ++|-+|-..|......
T Consensus 209 ~p~--~~~----~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 250 (474)
T 4abn_A 209 DVL--DGR----SWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV 250 (474)
T ss_dssp CTT--CHH----HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCC--CHH----HHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh
Confidence 654 222 234455555555 7788888888777664
No 120
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=86.67 E-value=2.3 Score=29.01 Aligned_cols=65 Identities=17% Similarity=0.188 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcc
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVS 168 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~ 168 (292)
+.....++.++...|++.+|...+... ..+. .-...|...+..|...+++..|..+.+++..+..
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~--------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p 74 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP--------NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 74 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCC--------CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 455677899999999999999887652 1111 1246888999999999999999999999987754
No 121
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=86.56 E-value=16 Score=31.97 Aligned_cols=99 Identities=10% Similarity=-0.063 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHH-HHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTF-RLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~e-Kl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
......++.++...|++.+|.+.+..+-- ..++. -..+..-.+.++...|++..|....+++.....+ +
T Consensus 130 ~~~~~~l~~~~~~~g~~~~A~~~l~~~~~------~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~--~-- 199 (291)
T 3mkr_A 130 LECMAMTVQILLKLDRLDLARKELKKMQD------QDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSP--T-- 199 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------HCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCC--C--
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHh------hCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCC--c--
Confidence 34667789999999999999999887521 11121 1222222335566779999999999999887543 2
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...+..++.++...++|=+|-..|.+....
T Consensus 200 --~~~~~~la~~~~~~g~~~eA~~~l~~al~~ 229 (291)
T 3mkr_A 200 --LLLLNGQAACHMAQGRWEAAEGVLQEALDK 229 (291)
T ss_dssp --HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 335667888999999999999999998775
No 122
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=86.43 E-value=1.7 Score=30.31 Aligned_cols=68 Identities=10% Similarity=-0.015 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhcc-CchhhHHHHHhhhhhhccc
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLED-DDAVNAEAFINKASFLVSS 169 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~-~D~~~Ae~~~nK~s~~~~~ 169 (292)
......+|.++...|++.+|.+.+... .... .......|...+.+|... +++..|..+++++......
T Consensus 40 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~ 109 (112)
T 2kck_A 40 SKYWLMKGKALYNLERYEEAVDCYNYVINVIE------DEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHH 109 (112)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSC------CTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCC
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCc------ccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccC
Confidence 345678999999999999999888753 1111 112456899999999999 9999999999999876543
No 123
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=86.40 E-value=1.4 Score=32.63 Aligned_cols=70 Identities=11% Similarity=-0.035 Sum_probs=54.8
Q ss_pred HhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc
Q 022765 93 EQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS 169 (292)
Q Consensus 93 ~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~ 169 (292)
.........|+.+|...|++.+|...+...- .+.++. ...|...+..|...|++..|..+++++.....+
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al------~~~p~~-~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 93 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGV------KQFPNH-QALRVFYAMVLYNLGRYEQGVELLLKIIAETSD 93 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH------HHCTTC-HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHH------HhCCCc-hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 4456777889999999999999999887631 111111 568888999999999999999999999877643
No 124
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=86.28 E-value=8.9 Score=33.34 Aligned_cols=63 Identities=14% Similarity=0.132 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhc
Q 022765 97 IIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLV 167 (292)
Q Consensus 97 ~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~ 167 (292)
.....+|..+...|++.+|...+... ..+. .-.+.+...+++|+..|++..|..+++++...-
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P--------~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~ 181 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQLSN--------QNGEIGLLLAETLIALNRSEDAEAVLXTIPLQD 181 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT--------SCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGG
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHhCC--------cchhHHHHHHHHHHHCCCHHHHHHHHHhCchhh
Confidence 34567888888899999998888763 1111 124678888899999999999999999886554
No 125
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=85.69 E-value=18 Score=31.78 Aligned_cols=94 Identities=13% Similarity=-0.012 Sum_probs=44.1
Q ss_pred HHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHH
Q 022765 99 REKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQ 178 (292)
Q Consensus 99 r~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~ 178 (292)
...|+.++...|++.+|...+...- .+++ .-...|...+.++.+.+++..|....+|+..+..+ + ..
T Consensus 172 ~~~l~~~~~~~g~~~~A~~~~~~al------~~~p-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~--~----~~ 238 (388)
T 1w3b_A 172 WSNLGCVFNAQGEIWLAIHHFEKAV------TLDP-NFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPN--H----AV 238 (388)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHH------HHCT-TCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTT--C----HH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH------hcCC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC--C----HH
Confidence 3445555666666666655544320 0000 01234555555555555555555555555443321 1 11
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 179 YKVCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 179 y~~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
.+...+.++-..++|-+|-..|.....
T Consensus 239 ~~~~l~~~~~~~g~~~~A~~~~~~al~ 265 (388)
T 1w3b_A 239 VHGNLACVYYEQGLIDLAIDTYRRAIE 265 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 223345555555555555555555443
No 126
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=85.59 E-value=3.3 Score=29.13 Aligned_cols=63 Identities=14% Similarity=-0.054 Sum_probs=48.8
Q ss_pred HHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHH-HHHHHHHHHhccCchhhHHHHHhhhhhhccc
Q 022765 100 EKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLS-KCVQIARLYLEDDDAVNAEAFINKASFLVSS 169 (292)
Q Consensus 100 ~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~-~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~ 169 (292)
..+|..+...|+|.+|.+.+...- ...+.. .. .|...+..|...|++..|..+..++..+..+
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al------~~~p~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 67 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFL------QTEPVG-KDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPD 67 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHH------HHCSST-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHH------HHCCCc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 346888899999999999887631 111111 34 8889999999999999999999999887654
No 127
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=85.49 E-value=4.2 Score=29.95 Aligned_cols=88 Identities=11% Similarity=0.046 Sum_probs=61.6
Q ss_pred hccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHH
Q 022765 109 EQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILD 188 (292)
Q Consensus 109 e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d 188 (292)
.|++.+|...+... ++. ..++..-...|...+.+|...|++..|..+++++..+..+. . ..+..++.++-
T Consensus 3 ~g~~~~A~~~~~~a-l~~---~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~--~----~~~~~l~~~~~ 72 (117)
T 3k9i_A 3 LGLEAQAVPYYEKA-IAS---GLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH--Q----ALRVFYAMVLY 72 (117)
T ss_dssp ----CCCHHHHHHH-HSS---CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--H----HHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH-HHc---CCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc--h----HHHHHHHHHHH
Confidence 45666666555442 111 01245678899999999999999999999999998876542 2 34455788888
Q ss_pred HhhHHHHHHHHHHHHHhh
Q 022765 189 LKRKFLEAALRYYDISQI 206 (292)
Q Consensus 189 ~~rkFLeAa~~Y~els~~ 206 (292)
..++|=+|-..|......
T Consensus 73 ~~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 73 NLGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHTCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHh
Confidence 889998888888877664
No 128
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=85.31 E-value=5.3 Score=35.90 Aligned_cols=96 Identities=21% Similarity=0.051 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchH
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQE 173 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~ 173 (292)
.+.+...||.+|...|+|.+|...+... .++. .-...|.+.+..|...+++..|..+++|+..+..+ +.
T Consensus 195 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p--------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~--~~ 264 (336)
T 1p5q_A 195 RLASHLNLAMCHLKLQAFSAAIESCNKALELDS--------NNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPN--NK 264 (336)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS--CH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC--CH
Confidence 4567788999999999999999887652 2221 12568899999999999999999999999887653 33
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHH-HHHHHH
Q 022765 174 VLNLQYKVCYARILDLKRKFLEAAL-RYYDIS 204 (292)
Q Consensus 174 ~LkL~y~~~~ari~d~~rkFLeAa~-~Y~els 204 (292)
.. +...++++...+++-++.+ .|..+.
T Consensus 265 ~a----~~~l~~~~~~~~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 265 AA----KTQLAVCQQRIRRQLAREKKLYANMF 292 (336)
T ss_dssp HH----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 3345555555666666633 344443
No 129
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=85.10 E-value=20 Score=31.84 Aligned_cols=97 Identities=10% Similarity=0.080 Sum_probs=75.7
Q ss_pred HHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHH
Q 022765 101 KLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYK 180 (292)
Q Consensus 101 ~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~ 180 (292)
.++.++...|++.+|...+...- +.. +-+.....+.|...+.+|...|++..|..+++++..+..+ +. ..+
T Consensus 262 ~~~~~~~~~g~~~~A~~~~~~~l-~~~--p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~--~~----~~~ 332 (450)
T 2y4t_A 262 ESAEELIRDGRYTDATSKYESVM-KTE--PSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPD--NV----NAL 332 (450)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHH-HHC--CSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT--CH----HHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHH-hcC--CcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc--cH----HHH
Confidence 34899999999999999887641 111 1144556789999999999999999999999999876432 22 345
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 181 VCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 181 ~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...+.++-..++|-+|...|......
T Consensus 333 ~~l~~~~~~~~~~~~A~~~~~~al~~ 358 (450)
T 2y4t_A 333 KDRAEAYLIEEMYDEAIQDYETAQEH 358 (450)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 66788888899999999999888775
No 130
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=84.85 E-value=10 Score=30.94 Aligned_cols=94 Identities=13% Similarity=0.031 Sum_probs=70.0
Q ss_pred HHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHH----------------HHHHHhccCchhhHHHHHhhh
Q 022765 100 EKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQ----------------IARLYLEDDDAVNAEAFINKA 163 (292)
Q Consensus 100 ~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~----------------i~rL~Le~~D~~~Ae~~~nK~ 163 (292)
...+..+-..|+|.+|...+... -..+++ -.+.|.- .+..|...|++..|..+++++
T Consensus 8 ~~~g~~~~~~g~~~~A~~~~~~a------l~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 80 (208)
T 3urz_A 8 LQKVSAAIEAGQNGQAVSYFRQT------IALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKEL 80 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH------HHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHH------HHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 34566677889999998887652 111222 2234444 899999999999999999999
Q ss_pred hhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 164 SFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 164 s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
..+-.+. ...+...+.++...++|=+|-..|......
T Consensus 81 l~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (208)
T 3urz_A 81 LQKAPNN------VDCLEACAEMQVCRGQEKDALRMYEKILQL 117 (208)
T ss_dssp HHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 8876542 234566788899999999999999999886
No 131
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=84.57 E-value=16 Score=30.10 Aligned_cols=162 Identities=15% Similarity=0.070 Sum_probs=100.4
Q ss_pred HHHHHHHhhcCCCHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcCcccchhHhHHHHHH
Q 022765 21 YKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIRE 100 (292)
Q Consensus 21 y~~ll~~i~~~~~~~~l~~~i~~~~~~~v~lv~sR~~l~~~~~~l~~l~~~~~~~~~~~~L~~i~~~~i~~E~q~a~lr~ 100 (292)
+..+-......++.+.-...++..+..+-.-......+........+ .+........++.. .|. ......
T Consensus 8 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~--~~~A~~~~~~al~~-~P~-------~~~a~~ 77 (217)
T 2pl2_A 8 PLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGL--VNPALENGKTLVAR-TPR-------YLGGYM 77 (217)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHH-CTT-------CHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHh-CCC-------cHHHHH
Confidence 33333444445555544445555444333333333333333333322 23334444444432 232 244566
Q ss_pred HHHHHHHhh-----------ccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc
Q 022765 101 KLADLYESE-----------QQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS 169 (292)
Q Consensus 101 ~LA~i~E~e-----------~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~ 169 (292)
.|+.++... |++.+|...+...- ...+ .-...|...+.+|...|++..|...++|+..+-
T Consensus 78 ~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al------~~~P-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-- 148 (217)
T 2pl2_A 78 VLSEAYVALYRQAEDRERGKGYLEQALSVLKDAE------RVNP-RYAPLHLQRGLVYALLGERDKAEASLKQALALE-- 148 (217)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHH------HHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHH------HhCc-ccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc--
Confidence 788888888 99999998886531 1111 124688899999999999999999999998876
Q ss_pred CchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 170 SQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 170 ~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
++.+ .+...+.++-..++|-+|-..|......
T Consensus 149 -~~~~----~~~~la~~~~~~g~~~~A~~~~~~al~~ 180 (217)
T 2pl2_A 149 -DTPE----IRSALAELYLSMGRLDEALAQYAKALEQ 180 (217)
T ss_dssp -CCHH----HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred -cchH----HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3333 2356788888889999998888888775
No 132
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=84.45 E-value=10 Score=27.80 Aligned_cols=66 Identities=14% Similarity=-0.011 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 135 FRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 135 eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.+.+.|...+..++..||+..|..+.+++..+..+. ...+...+.++-..++|-+|-..|......
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED------ARGYSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 356789999999999999999999999998876432 245666788888889999999888888775
No 133
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=84.02 E-value=7.4 Score=32.17 Aligned_cols=68 Identities=12% Similarity=0.096 Sum_probs=50.3
Q ss_pred HHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc
Q 022765 98 IREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS 169 (292)
Q Consensus 98 lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~ 169 (292)
....++.+|...|++.+|...+..+- +.+.. ...--+.+...+..|.+.|++..|..+.+++.....+
T Consensus 149 ~~~~~a~~~~~~~~~~~A~~~~~~~l-~~~p~---~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~ 216 (225)
T 2yhc_A 149 YEYSVAEYYTERGAWVAVVNRVEGML-RDYPD---TQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSN 216 (225)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHH-HHSTT---SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHH-HHCcC---CCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCC
Confidence 33567889999999999999888741 11111 1223468888999999999999999999988765543
No 134
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=83.92 E-value=5.2 Score=34.81 Aligned_cols=137 Identities=10% Similarity=-0.023 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHH
Q 022765 97 IIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVL 175 (292)
Q Consensus 97 ~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~L 175 (292)
.....+|..+...|+|.+|...+... ..+. .-...|...+..|+..|++..|..+++++..+..+ +.
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p--------~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~--~~-- 72 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAITRNP--------LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ--SV-- 72 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS--------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT--CH--
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC--CH--
Confidence 34567899999999999999988752 1111 12568999999999999999999999999876543 22
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhcCCCC-CCHHHHH-----HHHHHHHHHHhcCCCCchHHHHHHHHh
Q 022765 176 NLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDET-IDEEALE-----QALSAAVTCTILAAAGPQRSRVLATLY 249 (292)
Q Consensus 176 kL~y~~~~ari~d~~rkFLeAa~~Y~els~~~~~~~~~~~-ide~e~~-----~~L~~Av~caILApagp~RSrlL~~L~ 249 (292)
..+...+.++-..++|=+|-..|.......|. .+. .+..-+. ........-.-..|..+.-...|+.+.
T Consensus 73 --~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~ 147 (281)
T 2c2l_A 73 --KAHFFLGQCQLEMESYDEAIANLQRAYSLAKE---QRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRLI 147 (281)
T ss_dssp --HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---TTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc---chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 33456688888899999999988887665431 111 1211110 111111223345666777666676665
Q ss_pred c
Q 022765 250 K 250 (292)
Q Consensus 250 k 250 (292)
.
T Consensus 148 ~ 148 (281)
T 2c2l_A 148 A 148 (281)
T ss_dssp H
T ss_pred H
Confidence 3
No 135
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=83.67 E-value=9.4 Score=29.79 Aligned_cols=66 Identities=9% Similarity=-0.015 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 135 FRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 135 eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...+.+...+..++..|++..|..+++++..+-.. +. .++...+.++-..++|=+|-..|......
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~--~~----~~~~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY--DS----RFFLGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc--cH----HHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 35778899999999999999999999998876543 22 33456788888899999999999888775
No 136
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=83.32 E-value=6.1 Score=27.75 Aligned_cols=70 Identities=14% Similarity=0.092 Sum_probs=52.2
Q ss_pred CChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 131 IDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 131 ~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+++......|..+++.|...+++..|..+.+++...... +. .....++.++-..++|=+|...|......
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~--~~----~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 72 (125)
T 1na0_A 3 MDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN--NA----EAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (125)
T ss_dssp ----CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC--cH----HHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 344556788999999999999999999999999876532 22 24456777888888888888888777664
No 137
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=83.25 E-value=12 Score=35.20 Aligned_cols=98 Identities=12% Similarity=0.069 Sum_probs=78.0
Q ss_pred hHHHHHHHHHHHHHhhccH-HHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCc
Q 022765 94 QVLIIREKLADLYESEQQW-SKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQ 171 (292)
Q Consensus 94 q~a~lr~~LA~i~E~e~~~-~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~ 171 (292)
..+.....++.++...|++ .+|.+.+... .++. .-.+.|...+.+|...||+..|..+++++..+..+
T Consensus 100 ~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p--------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-- 169 (474)
T 4abn_A 100 VEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEP--------ELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-- 169 (474)
T ss_dssp CCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC--
T ss_pred hhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCC--------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--
Confidence 4577788899999999999 9999888752 2222 12568999999999999999999999999877532
Q ss_pred hHHHHHHHHHHHHHHHHHh---------hHHHHHHHHHHHHHhh
Q 022765 172 QEVLNLQYKVCYARILDLK---------RKFLEAALRYYDISQI 206 (292)
Q Consensus 172 ~~~LkL~y~~~~ari~d~~---------rkFLeAa~~Y~els~~ 206 (292)
-..+..++.++... ++|-+|-..|.+....
T Consensus 170 -----~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 208 (474)
T 4abn_A 170 -----KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM 208 (474)
T ss_dssp -----HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh
Confidence 15566777888887 8998988888887664
No 138
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=82.99 E-value=24 Score=35.93 Aligned_cols=166 Identities=12% Similarity=0.076 Sum_probs=104.6
Q ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcCcccchhHhHH
Q 022765 17 KIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVL 96 (292)
Q Consensus 17 ~~~~y~~ll~~i~~~~~~~~l~~~i~~~~~~~v~lv~sR~~l~~~~~~l~~l~~~~~~~~~~~~L~~i~~~~i~~E~q~a 96 (292)
-++.|..+-.-....++.+.-....+..+.-+-.-..+..-|........+ .+........+|+. .| ..+
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~--~~eA~~~~~~Al~l-~P-------~~~ 77 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGK--LQEALMHYKEAIRI-SP-------TFA 77 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHH-CT-------TCH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHh-CC-------CCH
Confidence 356777777767777777544444444443222223333333333333322 34445555555542 33 234
Q ss_pred HHHHHHHHHHHhhccHHHHHHHhcc-CCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHH
Q 022765 97 IIREKLADLYESEQQWSKAAQMLSG-IDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVL 175 (292)
Q Consensus 97 ~lr~~LA~i~E~e~~~~~AA~~L~~-I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~L 175 (292)
..-..|+.++...|++.+|.+.+.. |.++.. -.+.|...+.+|.+.|++.+|..+.+|+..+-.+ +.+
T Consensus 78 ~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~--------~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~--~~~- 146 (723)
T 4gyw_A 78 DAYSNMGNTLKEMQDVQGALQCYTRAIQINPA--------FADAHSNLASIHKDSGNIPEAIASYRTALKLKPD--FPD- 146 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC--CHH-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--ChH-
Confidence 5667899999999999999988764 222221 2568999999999999999999999999887653 222
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 176 NLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 176 kL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.+...+.++....+|-+|...|..+...
T Consensus 147 ---a~~~L~~~l~~~g~~~~A~~~~~kal~l 174 (723)
T 4gyw_A 147 ---AYCNLAHCLQIVCDWTDYDERMKKLVSI 174 (723)
T ss_dssp ---HHHHHHHHHHHTTCCTTHHHHHHHHHHH
T ss_pred ---HHhhhhhHHHhcccHHHHHHHHHHHHHh
Confidence 2344566666777777777777666543
No 139
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=82.92 E-value=15 Score=28.80 Aligned_cols=62 Identities=11% Similarity=0.004 Sum_probs=49.2
Q ss_pred HHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcc
Q 022765 100 EKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVS 168 (292)
Q Consensus 100 ~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~ 168 (292)
..+|..+...|+|.+|...+...- ..++ .-.+.|...+++|+..|++..|..+++++.....
T Consensus 10 ~~~a~~~~~~g~~~~A~~~~~~al------~~~P-~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p 71 (176)
T 2r5s_A 10 LKQVSELLQQGEHAQALNVIQTLS------DELQ-SRGDVKLAKADCLLETKQFELAQELLATIPLEYQ 71 (176)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTSC------HHHH-TSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHH------HHCC-CcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC
Confidence 457888999999999999998741 1122 2357899999999999999999999999866544
No 140
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=82.30 E-value=3.9 Score=31.23 Aligned_cols=71 Identities=15% Similarity=0.082 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhcc-CCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSG-IDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~-I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
..+...++.+|...|+|.+|...+.. |.++.. -.+.|...+..|...|++..|..+.+|+..+-+ ++.+
T Consensus 47 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~--------~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P--~~~~ 116 (126)
T 4gco_A 47 AILYSNRAACLTKLMEFQRALDDCDTCIRLDSK--------FIKGYIRKAACLVAMREWSKAQRAYEDALQVDP--SNEE 116 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHH
T ss_pred HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh--------hhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCc--CCHH
Confidence 34556789999999999999987764 333331 245799999999999999999999999988754 3444
Q ss_pred HH
Q 022765 175 LN 176 (292)
Q Consensus 175 Lk 176 (292)
.+
T Consensus 117 a~ 118 (126)
T 4gco_A 117 AR 118 (126)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 141
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=82.14 E-value=10 Score=26.27 Aligned_cols=65 Identities=9% Similarity=-0.051 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 136 RLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 136 Kl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+.+.|...++.++..|++..|..+.+++...... + .......+.++-..++|-+|-..|......
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~--~----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH--N----HVLYSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--C----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC--c----HHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 5678999999999999999999999999876543 2 234556677777888998888888887765
No 142
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=81.32 E-value=8.7 Score=29.69 Aligned_cols=72 Identities=10% Similarity=-0.058 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccC------ch------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 022765 135 FRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSS------QQ------EVLNLQYKVCYARILDLKRKFLEAALRYYD 202 (292)
Q Consensus 135 eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~------~~------~~LkL~y~~~~ari~d~~rkFLeAa~~Y~e 202 (292)
..++.+...+..++..|+|..|..+.+++..++... .+ .......+...+..+-..++|-+|-..|..
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 467889999999999999999999999998875321 11 344456667778888888899888888887
Q ss_pred HHhh
Q 022765 203 ISQI 206 (292)
Q Consensus 203 ls~~ 206 (292)
....
T Consensus 89 al~~ 92 (162)
T 3rkv_A 89 VLKR 92 (162)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 7665
No 143
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=81.05 E-value=15 Score=29.39 Aligned_cols=71 Identities=7% Similarity=0.081 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCc----------hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 136 RLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQ----------QEVLNLQYKVCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 136 Kl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~----------~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
..+.+...+..|+..+++..|..+.+++..+..... +..+....+...+.++-..++|-+|-..|.....
T Consensus 37 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 37 SAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 677899999999999999999999999988765432 2344567777888888889999998888887766
Q ss_pred h
Q 022765 206 I 206 (292)
Q Consensus 206 ~ 206 (292)
.
T Consensus 117 ~ 117 (198)
T 2fbn_A 117 I 117 (198)
T ss_dssp H
T ss_pred h
Confidence 4
No 144
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=80.13 E-value=5.5 Score=35.89 Aligned_cols=106 Identities=9% Similarity=-0.100 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhcc-CCCCCCCc------c---CChHHHHHHHHHHHHHHhccCchhhHHHHHhhhh
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLSG-IDLDSGMR------V---IDDTFRLSKCVQIARLYLEDDDAVNAEAFINKAS 164 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~~-I~vEt~~~------~---~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s 164 (292)
.+.....++..+...|+|.+|...+.. +.+..... . .....+...|...+.+|+..++|..|..+++++.
T Consensus 178 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al 257 (338)
T 2if4_A 178 AADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVL 257 (338)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 455567788999999999999987765 33222100 0 0011133589999999999999999999999998
Q ss_pred hhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 165 FLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 165 ~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.+..+ + ...+...+.++-..++|=+|-..|......
T Consensus 258 ~~~p~--~----~~a~~~lg~a~~~~g~~~~A~~~l~~al~l 293 (338)
T 2if4_A 258 TEEEK--N----PKALFRRGKAKAELGQMDSARDDFRKAQKY 293 (338)
T ss_dssp HHCTT--C----HHHHHHHHHHHHTTTCHHHHHHHHHHTTC-
T ss_pred HhCCC--C----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 76532 2 223455677778888888888887776553
No 145
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=80.11 E-value=12 Score=34.45 Aligned_cols=71 Identities=13% Similarity=0.051 Sum_probs=56.8
Q ss_pred hhHhHHHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc
Q 022765 91 FEEQVLIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS 169 (292)
Q Consensus 91 ~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~ 169 (292)
.......+...+|.+|...|+|.+|...+... .++. ...+.|.+.+..|...+++..|..+++++..+..+
T Consensus 268 ~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p--------~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~ 339 (370)
T 1ihg_A 268 LQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDP--------SNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPE 339 (370)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCc--------hhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 44556778889999999999999998877652 2221 23568899999999999999999999999887643
No 146
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=79.15 E-value=18 Score=27.39 Aligned_cols=66 Identities=9% Similarity=-0.015 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 135 FRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 135 eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.-.+.+...+..++..|++..|..+++++...-.. + ..++...+.++...++|=+|-..|......
T Consensus 16 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~--~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 81 (142)
T 2xcb_A 16 DTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY--D----ARYFLGLGACRQSLGLYEQALQSYSYGALM 81 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc--c----HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 34678889999999999999999999999876543 2 235567788888999999999999888775
No 147
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=79.02 E-value=15 Score=26.20 Aligned_cols=71 Identities=10% Similarity=-0.126 Sum_probs=56.0
Q ss_pred cCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 130 VIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 130 ~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
..+......-|...+..|...+|+..|..+.+++...... + ...+...+.++-..++|-+|-..|......
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~--~----~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 9 SHMNPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK--D----AKLYSNRAACYTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp CCSSSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT--C----HHHHHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred CCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--c----HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 3455667889999999999999999999999999876543 2 344566788888888888888888777664
No 148
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=78.21 E-value=42 Score=30.88 Aligned_cols=152 Identities=9% Similarity=0.002 Sum_probs=92.7
Q ss_pred hHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCCh-----HHHHHHHHHHH--HHHhccCchhhHHHHHhhhhhh
Q 022765 94 QVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDD-----TFRLSKCVQIA--RLYLEDDDAVNAEAFINKASFL 166 (292)
Q Consensus 94 q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~-----~eKl~~~l~i~--rL~Le~~D~~~Ae~~~nK~s~~ 166 (292)
.-..++-.++.++...|+.+.|.+.|..+ ....+ ++-+-+++-.+ .+....+++..|--++..+...
T Consensus 134 ~~lea~~l~vqi~L~~~r~d~A~k~l~~~------~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~ 207 (310)
T 3mv2_B 134 GTTELLLLAIEVALLNNNVSTASTIFDNY------TNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQT 207 (310)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHH------HHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHH------HhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh
Confidence 34556677899999999999999999884 34444 46666777666 4444555999999999998766
Q ss_pred cccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhcCCCCC------CHHHHHHHHHHHHHHHhcCCCCch
Q 022765 167 VSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETI------DEEALEQALSAAVTCTILAAAGPQ 240 (292)
Q Consensus 167 ~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~~~~~~~~~~i------de~e~~~~L~~Av~caILApagp~ 240 (292)
+.+.+...+- |. ...+.++|=+|-.-...+-... |.+ ++. --.+|.++|+|.... |..
T Consensus 208 ~p~~~~~~lL--ln-----~~~~~g~~~eAe~~L~~l~~~~------p~~~~k~~~~p~-~~~~LaN~i~l~~~l--gk~ 271 (310)
T 3mv2_B 208 FPTWKTQLGL--LN-----LHLQQRNIAEAQGIVELLLSDY------YSVEQKENAVLY-KPTFLANQITLALMQ--GLD 271 (310)
T ss_dssp SCSHHHHHHH--HH-----HHHHHTCHHHHHHHHHHHHSHH------HHTTTCHHHHSS-HHHHHHHHHHHHHHT--TCT
T ss_pred CCCcccHHHH--HH-----HHHHcCCHHHHHHHHHHHHHhc------ccccccccCCCC-CHHHHHHHHHHHHHh--ChH
Confidence 6432223333 32 3455566666655555433221 111 011 146887877777765 335
Q ss_pred HHHHHHHHhc-cccccCCCchhHHHHHH
Q 022765 241 RSRVLATLYK-DERCSKLKIYPILQKVY 267 (292)
Q Consensus 241 RSrlL~~L~k-Der~~~Lp~y~iL~Kmf 267 (292)
=.+++.++.+ +|.-+-+-.|...++.|
T Consensus 272 a~~l~~qL~~~~P~hp~i~d~~~k~~~F 299 (310)
T 3mv2_B 272 TEDLTNQLVKLDHEHAFIKHHQEIDAKF 299 (310)
T ss_dssp THHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 5788888876 34444344444444444
No 149
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=77.71 E-value=36 Score=29.79 Aligned_cols=61 Identities=18% Similarity=0.163 Sum_probs=28.5
Q ss_pred HHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 139 KCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 139 ~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
.|...+.+|.+.|++..|..+.+++..+..+ + ...+..++.++...++|-+|-..|.+...
T Consensus 307 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~--~----~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 367 (388)
T 1w3b_A 307 SLNNLANIKREQGNIEEAVRLYRKALEVFPE--F----AAAHSNLASVLQQQGKLQEALMHYKEAIR 367 (388)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHTTSCTT--C----HHHHHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--c----HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 4445555555555555555555555443221 1 11233344555555555555555544443
No 150
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=76.84 E-value=37 Score=29.56 Aligned_cols=171 Identities=10% Similarity=-0.008 Sum_probs=104.6
Q ss_pred hHHHHHHHHHHHHhhcCcccchhHhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhc
Q 022765 70 PETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLE 149 (292)
Q Consensus 70 ~~~~~~~~~~~L~~i~~~~i~~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le 149 (292)
.+........+++........ -.-.+.+...++.++...|++.+|...+...--.. .+ ........+...+++++.
T Consensus 190 ~~~A~~~l~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~-~~--~~~~~~~~~~~la~~~~~ 265 (373)
T 1hz4_A 190 LDNARSQLNRLENLLGNGKYH-SDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPE-FA--NNHFLQGQWRNIARAQIL 265 (373)
T ss_dssp HHHHHHHHHHHHHHHTTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCC-CT--TCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCcc-hhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCCCC-CC--cchhhHHHHHHHHHHHHH
Confidence 344455555555543322111 11122223356677889999999999987653211 11 111112356788999999
Q ss_pred cCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhcCCCCCCHHHHHHHHHHHH
Q 022765 150 DDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAV 229 (292)
Q Consensus 150 ~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~~~~~~~~~~ide~e~~~~L~~Av 229 (292)
.|++..|..+++++....................++++...+++-+|...|.+...... . ..
T Consensus 266 ~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~al~~~~----------~-----~g--- 327 (373)
T 1hz4_A 266 LGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLAN----------R-----TG--- 327 (373)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH----------H-----HC---
T ss_pred cCCHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc----------c-----cc---
Confidence 99999999999999877654443434445667778888888888887777766655311 0 00
Q ss_pred HHHhcCCCCchHHHHHHHHhccccccCCCchhH
Q 022765 230 TCTILAAAGPQRSRVLATLYKDERCSKLKIYPI 262 (292)
Q Consensus 230 ~caILApagp~RSrlL~~L~kDer~~~Lp~y~i 262 (292)
..-.+...||.-..+|.++.+.+.+..++..+.
T Consensus 328 ~~~~~~~~g~~~~~ll~~~~~~~~~~~~~~~~~ 360 (373)
T 1hz4_A 328 FISHFVIEGEAMAQQLRQLIQLNTLPELEQHRA 360 (373)
T ss_dssp CCHHHHTTHHHHHHHHHHHHHTTCSCHHHHHHH
T ss_pred HHHHHHHccHHHHHHHHHHHhCCCCchHHHHHH
Confidence 011233456777777888777777766665554
No 151
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=76.55 E-value=20 Score=34.76 Aligned_cols=100 Identities=6% Similarity=-0.167 Sum_probs=71.7
Q ss_pred HHHHHhhccHHHHHHHhcc---CCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc---CchHHHH
Q 022765 103 ADLYESEQQWSKAAQMLSG---IDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS---SQQEVLN 176 (292)
Q Consensus 103 A~i~E~e~~~~~AA~~L~~---I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~---~~~~~Lk 176 (292)
|.-+..+|+|.+|-.++.. +..... |. +.-.-+..+-.++.+|...|+|..|+.+..|+..+.-. .+.+++
T Consensus 316 a~~~~~qg~~~eA~~l~~~aL~~~~~~l-g~-~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~- 392 (490)
T 3n71_A 316 IDKARSEGLYHEVVKLCRECLEKQEPVF-AD-TNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQL- 392 (490)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHTTTB-CT-TSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHH-
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHhc-CC-CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHH-
Confidence 3446788999999776543 222221 11 22347888999999999999999999999999887643 345554
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 177 LQYKVCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 177 L~y~~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
..-+.-.|.++...++|-+|-..|..-..
T Consensus 393 a~~l~nLa~~~~~~G~~~eA~~~~~~Al~ 421 (490)
T 3n71_A 393 GMAVMRAGLTNWHAGHIEVGHGMICKAYA 421 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 55556678889999999888777765554
No 152
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=76.18 E-value=36 Score=29.09 Aligned_cols=65 Identities=11% Similarity=-0.033 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 136 RLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 136 Kl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
....|...+.+|...|++..|..+++++..+..+ + ...+..++.++-..++|-+|-..|......
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~--~----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 280 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN--D----YLLWNKLGATLANGNQSEEAVAAYRRALEL 280 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC--C----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3678889999999999999999999999877543 2 234567788888899999998888887664
No 153
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=75.33 E-value=26 Score=27.07 Aligned_cols=98 Identities=9% Similarity=-0.110 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVL 175 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~L 175 (292)
......++.++...+++.+|...+...-- ..+ .-.+.+...+..|...|++..|..+.+|+..+-.. +.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~a~~~~~~a~~------~~~-~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~--~~-- 141 (184)
T 3vtx_A 73 AEAYYILGSANFMIDEKQAAIDALQRAIA------LNT-VYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPG--FI-- 141 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------HCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CH--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH------hCc-cchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcch--hh--
Confidence 44556788889999999999888765311 111 12457888899999999999999999998876543 22
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 176 NLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 176 kL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
..+...+.++...++|-+|-..|......
T Consensus 142 --~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 142 --RAYQSIGLAYEGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp --HHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred --hHHHHHHHHHHHCCCHHHHHHHHHHHHhC
Confidence 24556788888899999999888887664
No 154
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=73.45 E-value=33 Score=34.94 Aligned_cols=97 Identities=13% Similarity=0.076 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhcc-CCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSG-IDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~-I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
+.....|+.+|...|++.+|...+.. |.++. .-.+.|...+..|.+.|++..|..+.+|+..+-.+ +.
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P--------~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~--~~- 111 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIRISP--------TFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPA--FA- 111 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CH-
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CH-
Confidence 45667899999999999999988764 32322 12568999999999999999999999999877543 22
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.-+...+.++-..++|-+|-..|......
T Consensus 112 ---~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l 140 (723)
T 4gyw_A 112 ---DAHSNLASIHKDSGNIPEAIASYRTALKL 140 (723)
T ss_dssp ---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 23456788888999999999999887775
No 155
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=73.33 E-value=6.5 Score=29.83 Aligned_cols=70 Identities=10% Similarity=0.157 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHhhccHHHHHHHhcc-CCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhc
Q 022765 97 IIREKLADLYESEQQWSKAAQMLSG-IDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLV 167 (292)
Q Consensus 97 ~lr~~LA~i~E~e~~~~~AA~~L~~-I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~ 167 (292)
.....+|.+|...|+|.+|.+.+.. |.++... ..........|.+++..|...+|+..|..+.+|+....
T Consensus 43 ~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~ 113 (127)
T 4gcn_A 43 TFYNNKAAVYFEEKKFAECVQFCEKAVEVGRET-RADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEF 113 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHhHHHHHHHhhhHHHHHHHHHHHHHhCccc-chhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 4456789999999999999887653 3333211 12333456789999999999999999999999987654
No 156
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=73.26 E-value=23 Score=25.36 Aligned_cols=64 Identities=13% Similarity=0.000 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 137 LSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 137 l~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...|...+..|+..|++..|..++.++..+-.+. . ..+..++.++...++|=+|...|......
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--~----~a~~~lg~~~~~~g~~~~A~~~~~~al~l 70 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPDY--V----GTYYHLGKLYERLDRTDDAIDTYAQGIEV 70 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC--T----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc--H----HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4578899999999999999999999998876542 2 25566888899999999998888877654
No 157
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=72.87 E-value=21 Score=24.81 Aligned_cols=65 Identities=8% Similarity=-0.134 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 136 RLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 136 Kl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
..+.|...+..++..|++..|..+.+++..+... +. ..+...+.++-..++|-+|-..|......
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~--~~----~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ--NP----VGYSNKAMALIKLGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT--CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--CH----HHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 3568899999999999999999999999887543 22 33556788888889998888888887664
No 158
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=72.57 E-value=7.5 Score=37.02 Aligned_cols=94 Identities=11% Similarity=-0.066 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
+.....+|.+|...|++.+|...+... .++. .-...|...+..|...|++..|..+.+|+..+..+. .+
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p--------~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~--~~ 109 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDK--------KYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHD--KD 109 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCT--------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC--TT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HH
Confidence 566788999999999999999887652 2222 124688899999999999999999999998875432 22
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYY 201 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~ 201 (292)
..+..-.+..+...++|-+|-..|.
T Consensus 110 --~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 110 --AKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp --HHHHHHHHHHHHHHHHHCCC-----
T ss_pred --HHHHHHHHHHHHHHHHHHHHhcccc
Confidence 2222233333556788888777776
No 159
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=72.40 E-value=11 Score=27.75 Aligned_cols=70 Identities=11% Similarity=-0.027 Sum_probs=51.0
Q ss_pred HHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc
Q 022765 99 REKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS 169 (292)
Q Consensus 99 r~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~ 169 (292)
...|+..+-..|+|..|..-+..- ...... ......+.+++...+..|.+.|++..|-.+.+++..+-.+
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~-~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~ 78 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEG-EISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPE 78 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT-CCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhcc-CCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC
Confidence 456888999999999888776542 100000 0012346789999999999999999999999999877654
No 160
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=71.99 E-value=11 Score=32.05 Aligned_cols=68 Identities=15% Similarity=0.037 Sum_probs=59.1
Q ss_pred HHHHHHHHHHhccCchhhHHHHHhhhhhhcccCc---hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 138 SKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQ---QEVLNLQYKVCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 138 ~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~---~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
=.++++++..++.+-|..|+...+++..+..+.. .++.+..-..++|..+=++++|-.|...|.....
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq 91 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQ 91 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 3678999999999999999999999888875432 4788888889999999999999999999998644
No 161
>3i5p_A Nucleoporin NUP170; helical stack, membrane, mRNA transport, nuclear pore complex, nucleus, phosphoprotein, protein transport; 3.20A {Saccharomyces cerevisiae}
Probab=70.87 E-value=5.6 Score=39.63 Aligned_cols=73 Identities=21% Similarity=0.235 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhcCCCCCCHHHHHHHHHHHHH-HHhcCCCC----------------
Q 022765 176 NLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVT-CTILAAAG---------------- 238 (292)
Q Consensus 176 kL~y~~~~ari~d~~rkFLeAa~~Y~els~~~~~~~~~~~ide~e~~~~L~~Av~-caILApag---------------- 238 (292)
.+.+..+..|++-.+++|.+||+=-+.|... +..++=++|.+.|++|+. |...+|.+
T Consensus 216 ~~~~~dLLWryy~k~~~~~~AA~VL~~LA~s------~~~i~L~~RIeyLsrA~~~a~~~~~~~~~~~~~~l~~~i~e~l 289 (525)
T 3i5p_A 216 SLKISNILWVYYSRRSKFFESAEILYRLATS------NFDITLFERIEFLSRANGFCNSVSPLSQKQRIVQLASRIQDAC 289 (525)
T ss_dssp --CHHHHHHTHHHHCCSHHHHHHHHHHHHSS------SSCCCHHHHHHHHHHHHHHC-------------CHHHHHHHHH
T ss_pred chhHHHHHHHHHHHcccHHHHHHHHHHHHhC------CCCCCHHHHHHHHHHHHHHhhhcCCchhHHHHHHHHHHHHHHH
Confidence 4567788999999999999999999999985 367899999999999995 44444432
Q ss_pred ---chHHHHHHHHhccccc
Q 022765 239 ---PQRSRVLATLYKDERC 254 (292)
Q Consensus 239 ---p~RSrlL~~L~kDer~ 254 (292)
+-|.++|.++..|.|.
T Consensus 290 dVA~IQ~~il~~l~~~~r~ 308 (525)
T 3i5p_A 290 EVAGIQGDILSLVYTDARI 308 (525)
T ss_dssp HHHHHHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHHHHHhcccc
Confidence 3466777788777664
No 162
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=70.17 E-value=41 Score=27.03 Aligned_cols=137 Identities=9% Similarity=0.015 Sum_probs=80.0
Q ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHhc-CC-cchhhHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcCcccchhHhHH
Q 022765 19 EQYKHILSSVISSNDIVQAKKFIDHMLS-DD-VPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVL 96 (292)
Q Consensus 19 ~~y~~ll~~i~~~~~~~~l~~~i~~~~~-~~-v~lv~sR~~l~~~~~~l~~l~~~~~~~~~~~~L~~i~~~~i~~E~q~a 96 (292)
+.|...-......++.+.-..+.+..+. +. -...+. -.+......+. ..+........++. +.|. ..
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~~~~~--~~~~A~~~~~~al~-~~p~-------~~ 76 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTA-YNCGVCADNIK--KYKEAADYFDIAIK-KNYN-------LA 76 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHH-HHHHHHHHHTT--CHHHHHHHHHHHHH-TTCS-------HH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHH-HHHHHHHHHhh--cHHHHHHHHHHHHH-hCcc-------hH
Confidence 4455555555566666444444444332 21 111111 11222222222 23344444444543 2222 45
Q ss_pred HHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhc
Q 022765 97 IIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLV 167 (292)
Q Consensus 97 ~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~ 167 (292)
.....++.+|...|++.+|.+.+... .++... ..-.......|...+..+...|++..|..+.+++..+-
T Consensus 77 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 147 (228)
T 4i17_A 77 NAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGN-ATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVT 147 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc-HHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcC
Confidence 66778999999999999999988753 222210 10112244789999999999999999999999998763
No 163
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=70.12 E-value=26 Score=25.14 Aligned_cols=63 Identities=10% Similarity=-0.075 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 138 SKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 138 ~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
..|...+..|+..|++..|..+++++..+..+. ...+...+.++...++|-+|...|......
T Consensus 20 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 20 LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY------SVAWKWLGKTLQGQGDRAGARQAWESGLAA 82 (115)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 588999999999999999999999998775432 224456788888889999988888877664
No 164
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=69.52 E-value=22 Score=32.03 Aligned_cols=110 Identities=14% Similarity=0.080 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhcc-CCC--CCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCc-
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSG-IDL--DSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQ- 171 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~-I~v--Et~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~- 171 (292)
+.+-..||.++-..|++.+|-+.+.. +.+ +.. +.-.+..-+..|-.++..|...|++..|..|.+|+..+.....
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~-~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~ 129 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEH-ADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSS 129 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS-GGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccc
Confidence 45556799999999999999887753 111 110 0111223456788999999999999999999999987654211
Q ss_pred --h-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 172 --Q-EVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 172 --~-~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+ ..-......-.+.+...+.+|-+|-..|......
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~ 167 (472)
T 4g1t_A 130 PYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEK 167 (472)
T ss_dssp SSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh
Confidence 1 1112233333445555566777777777766554
No 165
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=68.86 E-value=54 Score=30.59 Aligned_cols=71 Identities=11% Similarity=0.007 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCc---------hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 136 RLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQ---------QEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 136 Kl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~---------~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
....|...+..|...++|..|..+.+|+..+..... ...+....+...+..+-..++|-+|...|......
T Consensus 267 ~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 346 (457)
T 1kt0_A 267 QAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGL 346 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 567889999999999999999999999988775432 23455677788888899999999999999888775
No 166
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=68.71 E-value=30 Score=33.15 Aligned_cols=68 Identities=9% Similarity=-0.039 Sum_probs=44.7
Q ss_pred HHHHHHHHhhccHHHHHHHhc--------------cCCCCCCC----------------------ccCChHHHHHHHHHH
Q 022765 100 EKLADLYESEQQWSKAAQMLS--------------GIDLDSGM----------------------RVIDDTFRLSKCVQI 143 (292)
Q Consensus 100 ~~LA~i~E~e~~~~~AA~~L~--------------~I~vEt~~----------------------~~~~~~eKl~~~l~i 143 (292)
+.||+.|.+.|||.|||-+|. .++++... ...+.+.-++.+-++
T Consensus 15 ~~La~~h~~~~n~~EAa~cl~~~aaliae~L~~~~~~~~~~~~f~~i~p~~~ee~~~~~d~g~~~~~fte~~l~~ll~~a 94 (428)
T 2wm9_A 15 DSMARIHVKNGDLSEAAMCYVHVTALVAEYLTRKGVFRQGCTAFRVITPNIDEEASMMEDVGMQDVHFNEDVLMELLEQC 94 (428)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHTTSSSCCGGGGTTTCGGGGGGC---------CCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhcCCCccchhccccccCCCccccCHHHHHHHHHHH
Confidence 789999999999999999986 35543210 011333344566666
Q ss_pred HHHHhccCchhhHHHHHhhhhhhc
Q 022765 144 ARLYLEDDDAVNAEAFINKASFLV 167 (292)
Q Consensus 144 ~rL~Le~~D~~~Ae~~~nK~s~~~ 167 (292)
+.++-..+.|..|-..++-+...+
T Consensus 95 i~~f~kg~~~E~ai~~~k~L~~~y 118 (428)
T 2wm9_A 95 ADGLWKAERYELIADIYKLIIPIY 118 (428)
T ss_dssp HHHHHHTTCGGGHHHHHTTTHHHH
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHH
Confidence 677766677777766666555554
No 167
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=68.36 E-value=26 Score=24.16 Aligned_cols=61 Identities=8% Similarity=0.013 Sum_probs=48.5
Q ss_pred HHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 141 VQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 141 l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
++.+..++..+++..|..+++++.....+. .. ..+..++.++-..++|-+|-..|......
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~---~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVG--KD---EAYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSST--HH---HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCc--HH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 567889999999999999999998765432 21 14566788888889999999998888775
No 168
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=67.28 E-value=48 Score=26.79 Aligned_cols=67 Identities=13% Similarity=0.095 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS 169 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~ 169 (292)
...+...|+.+|...|++.+|...+... .++. .-...|...+.+|...|++..|..+.+|+..+-.+
T Consensus 53 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p--------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~ 120 (208)
T 3urz_A 53 SSKLATELALAYKKNRNYDKAYLFYKELLQKAP--------NNVDCLEACAEMQVCRGQEKDALRMYEKILQLEAD 120 (208)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC--------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 3455567999999999999999888652 2222 12578999999999999999999999999887654
No 169
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=66.56 E-value=58 Score=30.73 Aligned_cols=97 Identities=7% Similarity=-0.070 Sum_probs=69.4
Q ss_pred HHhhccHHHHHHHhcc---CCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc---CchHHHHHHH
Q 022765 106 YESEQQWSKAAQMLSG---IDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS---SQQEVLNLQY 179 (292)
Q Consensus 106 ~E~e~~~~~AA~~L~~---I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~---~~~~~LkL~y 179 (292)
+-.+|+|.+|...... +..... | -+.-.-+..+-.++..|...|+|.+|+.+..|+..+.-. .+.+++ ..-
T Consensus 297 ~~~~g~~~~a~~~~~~~L~~~~~~l-g-~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~-a~~ 373 (429)
T 3qwp_A 297 LKAHWKWEQVLAMCQAIISSNSERL-P-DINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVR-GVQ 373 (429)
T ss_dssp HHHTTCHHHHHHHHHHHHTCSSCCC-C-TTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHH-HHH
T ss_pred HHhhccHHHHHHHHHHHHHhccCcC-C-ccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHH-HHH
Confidence 3357899998776542 332222 1 133357889999999999999999999999999887643 355555 444
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 180 KVCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 180 ~~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
+.-.|.++.+.++|-+|-..|..-..
T Consensus 374 l~nLa~~~~~~g~~~eA~~~~~~Al~ 399 (429)
T 3qwp_A 374 VMKVGKLQLHQGMFPQAMKNLRLAFD 399 (429)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 45678888889998888776665544
No 170
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.33 E-value=35 Score=24.77 Aligned_cols=70 Identities=10% Similarity=-0.149 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 134 TFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 134 ~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
....+.|...+..|+..+++..|..+.+++..... +.......+..++.++-..++|-+|...|......
T Consensus 25 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~---~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 25 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDA---TPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCC---CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcc---cchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 34688999999999999999999999999987653 23334566777888888899999988888877664
No 171
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=65.58 E-value=65 Score=27.66 Aligned_cols=98 Identities=14% Similarity=-0.013 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVL 175 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~L 175 (292)
...+..||.++...|++.+|...+..+.-... + . ...++.....+.+.++...|...++++.....+ +.+
T Consensus 151 ~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p----~-~--~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~--~~~- 220 (287)
T 3qou_A 151 GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQ----D-T--RYQGLVAQIELLXQAADTPEIQQLQQQVAENPE--DAA- 220 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGC----S-H--HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTT--CHH-
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhc----c-h--HHHHHHHHHHHHhhcccCccHHHHHHHHhcCCc--cHH-
Confidence 56788899999999999999999998743321 1 1 133444445566777788888888888766543 333
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 176 NLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 176 kL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.+...|.++...++|=+|-..|.++...
T Consensus 221 ---~~~~la~~l~~~g~~~~A~~~l~~~l~~ 248 (287)
T 3qou_A 221 ---LATQLALQLHQVGRNEEALELLFGHLRX 248 (287)
T ss_dssp ---HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 3445688888899999999999999886
No 172
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=65.34 E-value=44 Score=25.66 Aligned_cols=64 Identities=11% Similarity=0.053 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHH-HHHhhHH--HHHHHHHHHHHhh
Q 022765 137 LSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARI-LDLKRKF--LEAALRYYDISQI 206 (292)
Q Consensus 137 l~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari-~d~~rkF--LeAa~~Y~els~~ 206 (292)
...|...+.+|+..|++..|..+.+++..+..+ +. .++...+.+ +-..++| -+|-..|......
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~--~~----~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE--NA----ELYAALATVLYYQASQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS--CH----HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--CH----HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh
Confidence 358999999999999999999999999887654 22 234445555 4455666 5555555555443
No 173
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=63.95 E-value=84 Score=28.39 Aligned_cols=138 Identities=19% Similarity=0.193 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCC-CCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGID-LDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~-vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
..+...++.++...|++.+|.+.+...- ++.. -...|...+.+|...|++..|..+++++.....+. ..
T Consensus 310 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~--------~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~--~~ 379 (537)
T 3fp2_A 310 PPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE--------NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTL--PE 379 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--TH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--hH
Confidence 4567789999999999999999887531 1111 12578899999999999999999999998775432 22
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhcCCCCC--CH-----------------------HHHHHHHHHHH
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETI--DE-----------------------EALEQALSAAV 229 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~~~~~~~~~~i--de-----------------------~e~~~~L~~Av 229 (292)
.+..++.++-..++|-+|-..|.......+. .+.. .- .+...++...-
T Consensus 380 ----~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~---~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~ 452 (537)
T 3fp2_A 380 ----VPTFFAEILTDRGDFDTAIKQYDIAKRLEEV---QEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLT 452 (537)
T ss_dssp ----HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---CSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhCCHHHHHHHHHHHHHcCCc---chhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHH
Confidence 3345588888889999999888887664331 1111 10 44444554444
Q ss_pred HHHhcCCCCchHHHHHHHHhc
Q 022765 230 TCTILAAAGPQRSRVLATLYK 250 (292)
Q Consensus 230 ~caILApagp~RSrlL~~L~k 250 (292)
.+.-+.|..+.=-..|+.+|.
T Consensus 453 ~a~~~~p~~~~~~~~l~~~~~ 473 (537)
T 3fp2_A 453 KACELDPRSEQAKIGLAQLKL 473 (537)
T ss_dssp HHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHH
Confidence 445567766655556666665
No 174
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=63.79 E-value=7.2 Score=37.16 Aligned_cols=92 Identities=16% Similarity=0.019 Sum_probs=69.7
Q ss_pred HHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHH
Q 022765 101 KLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQY 179 (292)
Q Consensus 101 ~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y 179 (292)
.+|..+...|+|.+|.+.+... .++. .-...|...+..|++.+++..|..+.+|+..+-.+ +. ..
T Consensus 11 ~lg~~~~~~g~~~~A~~~~~~Al~~~p--------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~--~~----~~ 76 (477)
T 1wao_1 11 TQANDYFKAKDYENAIKFYSQAIELNP--------SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK--YI----KG 76 (477)
T ss_dssp SSSSSTTTTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT--CH----HH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhCC--------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC--CH----HH
Confidence 3566677889999998887642 2211 12678999999999999999999999999877432 22 23
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 180 KVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 180 ~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+...+.++-..++|=+|-..|......
T Consensus 77 ~~~lg~~~~~~g~~~eA~~~~~~al~~ 103 (477)
T 1wao_1 77 YYRRAASNMALGKFRAALRDYETVVKV 103 (477)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 445688888899999998888887765
No 175
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=62.17 E-value=17 Score=31.45 Aligned_cols=65 Identities=20% Similarity=0.098 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhcc-CCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcc
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSG-IDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVS 168 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~-I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~ 168 (292)
..+...+|.+|...|+|.+|...+.. +.++.. -...|...+..|...|++..|..++.++..+..
T Consensus 38 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~--------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 38 AVYYTNRALCYLKMQQPEQALADCRRALELDGQ--------SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT--------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 45667899999999999999998876 333321 245788899999999999999999999987664
No 176
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=61.88 E-value=29 Score=28.79 Aligned_cols=28 Identities=21% Similarity=0.382 Sum_probs=14.1
Q ss_pred HHHHHHHHHHhc----cCchhhHHHHHhhhhh
Q 022765 138 SKCVQIARLYLE----DDDAVNAEAFINKASF 165 (292)
Q Consensus 138 ~~~l~i~rL~Le----~~D~~~Ae~~~nK~s~ 165 (292)
..+...+.+|.. .+|+..|..+.+|+..
T Consensus 75 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~ 106 (273)
T 1ouv_A 75 NGCHLLGNLYYSGQGVSQNTNKALQYYSKACD 106 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcccCHHHHHHHHHHHHH
Confidence 344445555555 5555555555555443
No 177
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=60.15 E-value=49 Score=32.13 Aligned_cols=168 Identities=12% Similarity=0.104 Sum_probs=108.4
Q ss_pred hccHHHHHHHhccC--------CCCCCCccCChHHHHHHHH--HHHHHHhccCchhhHHHHHhhhhhhcc----cCchHH
Q 022765 109 EQQWSKAAQMLSGI--------DLDSGMRVIDDTFRLSKCV--QIARLYLEDDDAVNAEAFINKASFLVS----SSQQEV 174 (292)
Q Consensus 109 e~~~~~AA~~L~~I--------~vEt~~~~~~~~eKl~~~l--~i~rL~Le~~D~~~Ae~~~nK~s~~~~----~~~~~~ 174 (292)
...+++||+++..+ .-+.. .+.+.+-+.-+|+ ...++|..-+....+...++-+...-. +.-...
T Consensus 139 ~~~le~~a~~i~k~F~~cl~Dr~~~~~-~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~ 217 (455)
T 3t5v_B 139 HQFLSHISSILSRLFNSIKPPRGNASS-TNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLD 217 (455)
T ss_dssp THHHHHHHHHHHHHHHHCCCC----CC-SSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHH
T ss_pred hhHHHHHHHHHHHHHHHhcccCCCccc-ccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCcc
Confidence 44677888887642 11110 0111223333333 455779999999999999988766432 112335
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh-hhhhcCCCCCCHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhcccc
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYYDISQI-QKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDER 253 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~-~~~~~~~~~ide~e~~~~L~~Av~caILApagp~RSrlL~~L~kDer 253 (292)
-..+|+-+.+|+.-.+.+|-+|..+..+=+.. -+...+.| ....-+...|.-.|.|-+|-..-|.++- +.+-+
T Consensus 218 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~~~~~-~~~~n~~~ILkyLIpv~LLlG~~P~~~l-l~k~~---- 291 (455)
T 3t5v_B 218 QQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLPLTNQ-AITRNGTRILNYMIPTGLILGKMVKWGP-LRPFL---- 291 (455)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHHHHHHTTCCBCHHH-HGGGS----
T ss_pred ceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCccccch-hhhhHHHHHHHHHHHHHHHcCCCCCHHH-Hcccc----
Confidence 68999999999999999999999887665553 22100000 0134567789999999999887888875 22211
Q ss_pred ccCCCchhHHHHHH--HhhhcChhHHHHHHhhcCCccc
Q 022765 254 CSKLKIYPILQKVY--LERILRKPEIDAFAEELKPHQV 289 (292)
Q Consensus 254 ~~~Lp~y~iL~Kmf--~~rii~~~ev~~F~~~L~pHQ~ 289 (292)
.+.|..+| +-+-++..++..|.+.|..|+.
T Consensus 292 ------~~~L~~~y~~L~~AVr~Gdl~~F~~~L~~~~~ 323 (455)
T 3t5v_B 292 ------SQETIDNWSVLYKHVRYGNIQGVSLWLRQNER 323 (455)
T ss_dssp ------CHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHH
T ss_pred ------hHHHHHHHHHHHHHHHhCCHHHHHHHHHHhHH
Confidence 14566644 5667788999999999988863
No 178
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=59.47 E-value=40 Score=25.01 Aligned_cols=64 Identities=8% Similarity=-0.117 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 137 LSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 137 l~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
...+...+..+++.|++..|...++++...-.+. . .....++.++...++|-+|-..|......
T Consensus 17 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~--~----~a~~~lg~~~~~~g~~~~A~~~~~~al~l 80 (121)
T 1hxi_A 17 HENPMEEGLSMLKLANLAEAALAFEAVCQKEPER--E----EAWRSLGLTQAENEKDGLAIIALNHARML 80 (121)
T ss_dssp CSCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC--H----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC--H----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3457889999999999999999999998876542 2 23456788888899999999888887765
No 179
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=58.93 E-value=30 Score=25.38 Aligned_cols=69 Identities=9% Similarity=0.148 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhccCchhhHHHHHhhhhhhcccCch-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 138 SKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQ-EVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 138 ~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~-~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+-|..+++.+.+.+||.+|..+..+|.....+..+ ..-+-..+..++..+...++|-.|-..|.+....
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 45789999999999999999999999887643211 1112223344555666666777776666666554
No 180
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=57.85 E-value=1.3e+02 Score=28.52 Aligned_cols=67 Identities=12% Similarity=0.048 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 022765 136 RLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYD 202 (292)
Q Consensus 136 Kl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~e 202 (292)
|..+=+|.+.+|++.|||..|-..+++...-....+|..+.+.-+.+-++++-.-+++-.+-.-|..
T Consensus 98 r~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~ 164 (394)
T 3txn_A 98 RQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTS 164 (394)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 4444558999999999999999999999988887788899999999999999888877775444443
No 181
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=57.23 E-value=37 Score=26.92 Aligned_cols=65 Identities=18% Similarity=0.179 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 136 RLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 136 Kl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
-.+.|...+..|...|++..|..+++++..+-.. + -.+....+.++...++|=+|...|......
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~--~----~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY--N----VDYIMGLAAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--C----HHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 4678899999999999999999999999887653 2 236677888999999999999999988775
No 182
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=53.79 E-value=26 Score=30.31 Aligned_cols=50 Identities=6% Similarity=-0.106 Sum_probs=35.0
Q ss_pred hccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhh
Q 022765 109 EQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFL 166 (292)
Q Consensus 109 e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~ 166 (292)
.|++.+|.+++... .... .-.++|+.-+.++...|++.+|..+..|+...
T Consensus 182 ~~~~~~A~~~~~~al~~~p--------~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 182 SKDKSVAFKIFELGLKKYG--------DIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp SCCHHHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred cCCHHHHHHHHHHHHHhCC--------CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 57888887777542 1111 12467888888888888888888888888775
No 183
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=53.62 E-value=56 Score=31.42 Aligned_cols=76 Identities=14% Similarity=0.038 Sum_probs=47.5
Q ss_pred hHhHHHHHHHHHHHHHhhccHHHHHHHhcc----CCCCC-----------CCccCChH-HHHHHHHHHHHHHhccCchhh
Q 022765 92 EEQVLIIREKLADLYESEQQWSKAAQMLSG----IDLDS-----------GMRVIDDT-FRLSKCVQIARLYLEDDDAVN 155 (292)
Q Consensus 92 E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~----I~vEt-----------~~~~~~~~-eKl~~~l~i~rL~Le~~D~~~ 155 (292)
++-.-+-=..||+.|.+.|||.|||-+|.- +..+. ....-+.. -|-.+|-+++.+|-..+-|..
T Consensus 31 ~el~i~~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ 110 (436)
T 2yin_A 31 EEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEE 110 (436)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred hHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHH
Confidence 344444458899999999999999999921 11111 01111222 255567777777777777777
Q ss_pred HHHHHhhhhhhc
Q 022765 156 AEAFINKASFLV 167 (292)
Q Consensus 156 Ae~~~nK~s~~~ 167 (292)
|-..++-..+.+
T Consensus 111 ai~l~k~L~~~y 122 (436)
T 2yin_A 111 AISLCKELAEQY 122 (436)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777777666555
No 184
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=51.12 E-value=34 Score=33.88 Aligned_cols=66 Identities=12% Similarity=-0.071 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcc
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVS 168 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~ 168 (292)
......+|.++...|++.+|.+.+...-- ..+ .-.+.|...+.+|+..|++..|...++|+..+-.
T Consensus 433 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~------~~p-~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P 498 (681)
T 2pzi_A 433 VELPLMEVRALLDLGDVAKATRKLDDLAE------RVG-WRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFP 498 (681)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHHHHH------HHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST
T ss_pred hhHHHHHHHHHHhcCCHHHHHHHHHHHhc------cCc-chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 34567789999999999999988865311 111 1246888899999999999999999999887654
No 185
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=50.46 E-value=13 Score=31.62 Aligned_cols=32 Identities=28% Similarity=0.332 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhccCCCCC
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLSGIDLDS 126 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt 126 (292)
...+|..+|..|.+-|++.+|-.+|.+||...
T Consensus 121 e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~k~ 152 (167)
T 3ffl_A 121 EIEVKYKLAECYTVLKQDKDAIAILDGIPSRQ 152 (167)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSCGGG
T ss_pred hHHHHHHHHHHHHHHCCHHHHHHHHhcCCchh
Confidence 46789999999999999999999999999876
No 186
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=49.88 E-value=1.2e+02 Score=29.25 Aligned_cols=85 Identities=20% Similarity=0.038 Sum_probs=62.1
Q ss_pred HHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcc------cCchHHHHHHH
Q 022765 106 YESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVS------SSQQEVLNLQY 179 (292)
Q Consensus 106 ~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~------~~~~~~LkL~y 179 (292)
.-.-|+|++|-++-..++ +. ..|-+.++++|+.+|+..|+....++...-. ...+.+.
T Consensus 662 ~l~~~~~~~A~~~~~~~~---------~~---~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~---- 725 (814)
T 3mkq_A 662 ALKVGQLTLARDLLTDES---------AE---MKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEG---- 725 (814)
T ss_dssp HHHHTCHHHHHHHHTTCC---------CH---HHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHH----
T ss_pred hhhcCCHHHHHHHHHhhC---------cH---hHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHH----
Confidence 345788999988866542 11 4899999999999999999999998765321 1222221
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 180 KVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 180 ~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
-..++++...+++|..|-..|....+.
T Consensus 726 ~~~~~~~a~~~~~~~~A~~~~~~~g~~ 752 (814)
T 3mkq_A 726 LVTLAKDAETTGKFNLAFNAYWIAGDI 752 (814)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHcCchHHHHHHHHHcCCH
Confidence 235688888899999988888776553
No 187
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=49.27 E-value=87 Score=25.80 Aligned_cols=90 Identities=21% Similarity=0.239 Sum_probs=64.7
Q ss_pred HHHHHHHHh----hccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhc----cCchhhHHHHHhhhhhhcccCc
Q 022765 100 EKLADLYES----EQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLE----DDDAVNAEAFINKASFLVSSSQ 171 (292)
Q Consensus 100 ~~LA~i~E~----e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le----~~D~~~Ae~~~nK~s~~~~~~~ 171 (292)
..|+.+|.. .|++.+|.+.+... + ... -...+...+.+|.. .+|+.+|..+.+|+...-
T Consensus 78 ~~lg~~~~~g~~~~~~~~~A~~~~~~a-~-----~~~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~---- 144 (273)
T 1ouv_A 78 HLLGNLYYSGQGVSQNTNKALQYYSKA-C-----DLK---YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN---- 144 (273)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHH-H-----HTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT----
T ss_pred HHHHHHHhCCCCcccCHHHHHHHHHHH-H-----HcC---CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC----
Confidence 356778888 88888888887652 0 111 35688889999999 999999999999998642
Q ss_pred hHHHHHHHHHHHHHHHHH----hhHHHHHHHHHHHHHhh
Q 022765 172 QEVLNLQYKVCYARILDL----KRKFLEAALRYYDISQI 206 (292)
Q Consensus 172 ~~~LkL~y~~~~ari~d~----~rkFLeAa~~Y~els~~ 206 (292)
+.. -...++.++.. ..+|-+|-..|......
T Consensus 145 ~~~----a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 179 (273)
T 1ouv_A 145 DGD----GCTILGSLYDAGRGTPKDLKKALASYDKACDL 179 (273)
T ss_dssp CHH----HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred cHH----HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 222 23345666666 77888887777776653
No 188
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=48.64 E-value=45 Score=28.50 Aligned_cols=96 Identities=15% Similarity=0.142 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhcCCCCCCHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhcccc
Q 022765 174 VLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDER 253 (292)
Q Consensus 174 ~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~~~~~~~~~~ide~e~~~~L~~Av~caILApagp~RSrlL~~L~kDer 253 (292)
.-.++|+-..+|+.-.+++|-+|..+..+-+..- |.-...-+...|.--|.|.+|-..=|.++-+ .+ |+
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~------~~~~~~~k~~IL~yLIp~~Ll~G~iP~~~ll-~~-~~--- 79 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHC------HRSSQKNKRMILIYLLPVKMLLGHMPTVELL-KK-YH--- 79 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------CTTCHHHHHHHHHHHHHHHHHTTCEECHHHH-HH-TT---
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHC------CHhHHHHHHHHHHHHHHHHHHcCCCCCHHHh-hh-Cc---
Confidence 3468899999999999999999998877665531 3334667888999999999998777766543 22 21
Q ss_pred ccCCCchhHHHHHHHhhhcChhHHHHHHhhcCCcc
Q 022765 254 CSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQ 288 (292)
Q Consensus 254 ~~~Lp~y~iL~Kmf~~rii~~~ev~~F~~~L~pHQ 288 (292)
+..|..|. +-++..++..|.+.|..|+
T Consensus 80 ---~~~y~~L~-----~Avr~Gdl~~f~~~l~~~~ 106 (203)
T 3t5x_A 80 ---LMQFAEVT-----RAVSEGNLLLLHEALAKHE 106 (203)
T ss_dssp ---CGGGHHHH-----HHHHHTCHHHHHHHHHHTH
T ss_pred ---hhHHHHHH-----HHHHhCCHHHHHHHHHHhH
Confidence 12355444 4456678888888887775
No 189
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=43.82 E-value=73 Score=31.47 Aligned_cols=92 Identities=14% Similarity=0.009 Sum_probs=66.3
Q ss_pred HhhccHHHHHHHhccCC---CCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHH
Q 022765 107 ESEQQWSKAAQMLSGID---LDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCY 183 (292)
Q Consensus 107 E~e~~~~~AA~~L~~I~---vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ 183 (292)
-..|++.+|.+.+...- ++.. +... ..-.+.|...++.|+..|++..|..+++++...-.+ +. ..+...
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~-~~~~-p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~--~~----~a~~~l 473 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDAD-GVDF-SESVELPLMEVRALLDLGDVAKATRKLDDLAERVGW--RW----RLVWYR 473 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC--------CC-TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC--CH----HHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhccccc-cccc-ccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcc--hH----HHHHHH
Confidence 67889999988887542 1110 0111 123468999999999999999999999999876543 22 244567
Q ss_pred HHHHHHhhHHHHHHHHHHHHHhh
Q 022765 184 ARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 184 ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+.++-..++|=+|-..|......
T Consensus 474 g~~~~~~g~~~~A~~~~~~al~l 496 (681)
T 2pzi_A 474 AVAELLTGDYDSATKHFTEVLDT 496 (681)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh
Confidence 77788889999999999888775
No 190
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=41.69 E-value=1.2e+02 Score=23.41 Aligned_cols=102 Identities=16% Similarity=0.062 Sum_probs=66.6
Q ss_pred hhHhHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHh-ccCchhhHHHHHhhhhhhccc
Q 022765 91 FEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYL-EDDDAVNAEAFINKASFLVSS 169 (292)
Q Consensus 91 ~E~q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~L-e~~D~~~Ae~~~nK~s~~~~~ 169 (292)
...........|+.++...|++.+|...+..+.-.. + +.. ++.-.+.+.+ ...+...|...++++.....+
T Consensus 35 ~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~---p-~~~----~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~ 106 (176)
T 2r5s_A 35 ELQSRGDVKLAKADCLLETKQFELAQELLATIPLEY---Q-DNS----YKSLIAKLELHQQAAESPELKRLEQELAANPD 106 (176)
T ss_dssp HHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGG---C-CHH----HHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTT
T ss_pred HCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhcc---C-ChH----HHHHHHHHHHHhhcccchHHHHHHHHHHhCCC
Confidence 344456778889999999999999999998863211 1 222 1211222322 323344567778887765443
Q ss_pred CchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 170 SQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 170 ~~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
+. ..+...+.++...++|=+|-..|..+...
T Consensus 107 --~~----~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 137 (176)
T 2r5s_A 107 --NF----ELACELAVQYNQVGRDEEALELLWNILKV 137 (176)
T ss_dssp --CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred --CH----HHHHHHHHHHHHcccHHHHHHHHHHHHHh
Confidence 22 23445688888899999999999988775
No 191
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=41.46 E-value=1.2e+02 Score=34.26 Aligned_cols=51 Identities=16% Similarity=0.108 Sum_probs=42.0
Q ss_pred HHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhh
Q 022765 101 KLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFL 166 (292)
Q Consensus 101 ~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~ 166 (292)
.+++.++.+|+|.+|...-.. +..|.+.++.|+.-|++..|-...+|++..
T Consensus 1200 ~iGd~le~eg~YeeA~~~Y~k---------------A~ny~rLA~tLvkLge~q~AIEaarKA~n~ 1250 (1630)
T 1xi4_A 1200 QVGDRCYDEKMYDAAKLLYNN---------------VSNFGRLASTLVHLGEYQAAVDGARKANST 1250 (1630)
T ss_pred HHHHHHHhcCCHHHHHHHHHh---------------hhHHHHHHHHHHHhCCHHHHHHHHHHhCCH
Confidence 478888888888888777665 348999999999999999999999999654
No 192
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=37.84 E-value=62 Score=30.76 Aligned_cols=95 Identities=9% Similarity=-0.132 Sum_probs=68.2
Q ss_pred hhccHHHHHHHhcc---CCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc---CchHHHHHHHHH
Q 022765 108 SEQQWSKAAQMLSG---IDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS---SQQEVLNLQYKV 181 (292)
Q Consensus 108 ~e~~~~~AA~~L~~---I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~---~~~~~LkL~y~~ 181 (292)
..|+|.+|-.++.. |.....+ . +.-.-+..+-.++..|...|+|.+|+.+..|+..+... .+.+++-..| .
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg-~-~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l-~ 386 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFE-D-SNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMW-L 386 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBC-T-TSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHH-H
T ss_pred hccCHHHHHHHHHHHHHHhhCccC-h-hchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHH-H
Confidence 45788888877643 2222211 1 22346788899999999999999999999999887653 4556654444 4
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 182 CYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 182 ~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
-.|.++.+.++|-+|-..|..-..
T Consensus 387 nLa~~~~~qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 387 KLGRLYMGLENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCHHHHHHHHHHHHH
Confidence 678999999999888777765544
No 193
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=36.64 E-value=68 Score=28.51 Aligned_cols=71 Identities=8% Similarity=-0.061 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCc-----------hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 022765 136 RLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQ-----------QEVLNLQYKVCYARILDLKRKFLEAALRYYDIS 204 (292)
Q Consensus 136 Kl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~-----------~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~els 204 (292)
....|...+..|+..+++..|..+.+++..+..... ...++...+..++.++-..++|-+|...|....
T Consensus 178 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al 257 (338)
T 2if4_A 178 AADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVL 257 (338)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 566788899999999999999999999887654311 122333466677888888888888888888776
Q ss_pred hh
Q 022765 205 QI 206 (292)
Q Consensus 205 ~~ 206 (292)
..
T Consensus 258 ~~ 259 (338)
T 2if4_A 258 TE 259 (338)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 194
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=36.08 E-value=1.3e+02 Score=27.99 Aligned_cols=67 Identities=16% Similarity=0.169 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhc
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLV 167 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~ 167 (292)
...+...++.+++..|++.+|..++... ++ ..+..-...|+.-++++...|++..|..+++|+....
T Consensus 320 ~~~l~~~~~~~~~~~g~~~~A~~~~~~a-l~-----~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~ 386 (530)
T 2ooe_A 320 NMLLYFAYADYEESRMKYEKVHSIYNRL-LA-----IEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDA 386 (530)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHH-HH-----SSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHH-hC-----ccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhcc
Confidence 3567788899999999999999887752 11 1111112489999999999999999999999997654
No 195
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=36.04 E-value=41 Score=32.74 Aligned_cols=78 Identities=10% Similarity=0.030 Sum_probs=43.7
Q ss_pred HHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHH
Q 022765 101 KLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYK 180 (292)
Q Consensus 101 ~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~ 180 (292)
.|...|++-|+|.++-+.+.+ +.. ..|..+...|-+.|.|..|..+.+++ .++
T Consensus 99 ~Li~~Y~Klg~l~e~e~f~~~-----pn~--------~a~~~IGd~~~~~g~yeeA~~~Y~~a--------------~n~ 151 (449)
T 1b89_A 99 ELIFALAKTNRLAELEEFING-----PNN--------AHIQQVGDRCYDEKMYDAAKLLYNNV--------------SNF 151 (449)
T ss_dssp ----------CHHHHTTTTTC-----C------------------------CTTTHHHHHHHT--------------TCH
T ss_pred HHHHHHHHhCCHHHHHHHHcC-----CcH--------HHHHHHHHHHHHcCCHHHHHHHHHHh--------------hhH
Confidence 466688889999998887764 111 28999999999999999999999988 377
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 181 VCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 181 ~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
.++|..+-.-++|=+|...|.....
T Consensus 152 ~~LA~~L~~Lg~yq~AVea~~KA~~ 176 (449)
T 1b89_A 152 GRLASTLVHLGEYQAAVDGARKANS 176 (449)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhccHHHHHHHHHHcCC
Confidence 7888888888999999999988744
No 196
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=35.08 E-value=1.9e+02 Score=23.79 Aligned_cols=68 Identities=7% Similarity=-0.093 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHhhc---cHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc
Q 022765 97 IIREKLADLYESEQ---QWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS 169 (292)
Q Consensus 97 ~lr~~LA~i~E~e~---~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~ 169 (292)
..+..+|-.+..-+ ++.++..+|.++=-++ +++.+.+.+--.+--|...+||.+|..|++++..+-++
T Consensus 33 ~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-----~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~ 103 (152)
T 1pc2_A 33 STQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-----SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQ 103 (152)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-----CHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-----CccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC
Confidence 44455555555544 7888888888751111 24456666667777789999999999999999887764
No 197
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=34.99 E-value=2.3e+02 Score=25.95 Aligned_cols=26 Identities=4% Similarity=0.115 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHhc
Q 022765 95 VLIIREKLADLYESEQQWSKAAQMLS 120 (292)
Q Consensus 95 ~a~lr~~LA~i~E~e~~~~~AA~~L~ 120 (292)
-+.....++.++...|++.+|...+.
T Consensus 96 ~~~a~~~lg~~~~~~g~~~~Al~~~~ 121 (382)
T 2h6f_A 96 FRDVYDYFRAVLQRDERSERAFKLTR 121 (382)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCChHHHHHHHH
Confidence 33444445555555555555554443
No 198
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=33.30 E-value=2.6e+02 Score=24.78 Aligned_cols=64 Identities=16% Similarity=0.081 Sum_probs=41.5
Q ss_pred HHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHhh
Q 022765 140 CVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARIL-DLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 140 ~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~-d~~rkFLeAa~~Y~els~~ 206 (292)
|...+..|...+++..|..+.+|+..+-.+ +.+.. ..+..++.+. ...++|-+|-..|.+....
T Consensus 337 ~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i 401 (472)
T 4g1t_A 337 CSILASLHALADQYEEAEYYFQKEFSKELT--PVAKQ-LLHLRYGNFQLYQMKCEDKAIHHFIEGVKI 401 (472)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--HHHHH-HHHHHHHHHHHHTSSCHHHHHHHHHHHHHS
T ss_pred hhhHHHHHHHhccHHHHHHHHHHHHhcCCC--ChHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 456788899999999999999999765433 22211 1222344443 3456777777777766554
No 199
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=32.62 E-value=2.3e+02 Score=24.05 Aligned_cols=66 Identities=15% Similarity=0.181 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccC-CCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcc
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGI-DLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVS 168 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I-~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~ 168 (292)
..+...++.+++..|++.+|..++... .+... +.+ ..|+.-+.++...|++..|....+|+.....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~----~~~---~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p 165 (308)
T 2ond_A 99 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI----DPT---LVYIQYMKFARRAEGIKSGRMIFKKAREDAR 165 (308)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSS----CTH---HHHHHHHHHHHHHHCHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccc----Ccc---HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Confidence 346678889999999999999877652 22211 011 2888889999999999999999999876543
No 200
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=31.81 E-value=60 Score=26.42 Aligned_cols=66 Identities=15% Similarity=0.183 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHh----hccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhc----cCchhhHHHHHhhhhhh
Q 022765 96 LIIREKLADLYES----EQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLE----DDDAVNAEAFINKASFL 166 (292)
Q Consensus 96 a~lr~~LA~i~E~----e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le----~~D~~~Ae~~~nK~s~~ 166 (292)
..-...|+.+|.. .+|+.+|.+.+..- ++.+ +.+.-..-+.....+|+. .+|+.+|..+.+|+...
T Consensus 85 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A-~~~~----~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 85 KSGEIVLARVLVNRQAGATDVAHAITLLQDA-ARDS----ESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHH-TSST----TSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCccCHHHHHHHHHHH-HHcC----CCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 3445678999988 88999999988762 1111 101236678888999999 88999999999999876
No 201
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=31.73 E-value=2.6e+02 Score=24.54 Aligned_cols=107 Identities=13% Similarity=0.142 Sum_probs=61.4
Q ss_pred HHHHHHHHHHhcC--CcchhhHHHH-HHHHHHHhcC---C----ChHH---HHHHHHHHHHhhcC-cccchhHhHHHHHH
Q 022765 35 VQAKKFIDHMLSD--DVPLVVSRQL-LQTFAQELGR---L----EPET---QKEIANYTLAQIQP-RVVSFEEQVLIIRE 100 (292)
Q Consensus 35 ~~l~~~i~~~~~~--~v~lv~sR~~-l~~~~~~l~~---l----~~~~---~~~~~~~~L~~i~~-~~i~~E~q~a~lr~ 100 (292)
..++..++.++.+ +++..-.|.+ +-.|...+.. + +.+. -.+=+..+++.|.. -..-+|+..--|+.
T Consensus 42 rq~rdi~eall~~~~~~~a~~~k~i~icQfL~RI~eG~~LD~~Fd~d~~lTPLESAl~v~~~I~~e~~~lheei~~Llk~ 121 (211)
T 3bqo_A 42 RRTRNSAEAIIHGLSSLTACQLRTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKI 121 (211)
T ss_dssp HHHHHHHHHHHHTCSCCCHHHHHHHHHHHHHHHHHTTTCTTEECSSSTTCCHHHHHHHHHTTSCSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccccchHHHHHHHHHHHcCCCCCCccCCCCCCChHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 3445555666633 4454444552 2233333322 2 2222 35555666677743 33567888888899
Q ss_pred HHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHH
Q 022765 101 KLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQ 142 (292)
Q Consensus 101 ~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~ 142 (292)
+.--+|-+.|.+.+|.++|..+==+++ ..-..+-|+-.+++
T Consensus 122 qAV~VCiekg~Fk~A~eiLkr~f~~~~-~~~~lr~kL~~II~ 162 (211)
T 3bqo_A 122 QAIAVCMENGNFKEAEEVFERIFGDPN-SHMPFKSKLLMIIS 162 (211)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHC------CCTTHHHHHHHHH
T ss_pred HHHHHHHHccchHHHHHHHHHHhcCCC-CchHHHHHHHHHHH
Confidence 999999999999999999999654543 13344445554443
No 202
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=30.57 E-value=22 Score=29.02 Aligned_cols=27 Identities=19% Similarity=0.085 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHhccCchhhHHHHH
Q 022765 134 TFRLSKCVQIARLYLEDDDAVNAEAFI 160 (292)
Q Consensus 134 ~eKl~~~l~i~rL~Le~~D~~~Ae~~~ 160 (292)
.+-.+.|++-++=+|++||+++|--=.
T Consensus 4 l~lAe~yL~EA~ell~kGD~vQAsEK~ 30 (129)
T 2jpu_A 4 STSAEVYYEEAEEFLSKGDLVQACEKY 30 (129)
T ss_dssp SCHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 345679999999999999999985433
No 203
>2h56_A DNA-3-methyladenine glycosidase; 10174367, EC 3.2.2.-, struc genomics, PSI-2, protein structure initiative, joint center structural genomics; 2.55A {Bacillus halodurans}
Probab=29.58 E-value=1.7e+02 Score=25.32 Aligned_cols=84 Identities=11% Similarity=0.184 Sum_probs=52.6
Q ss_pred HHHHHHHHhhcC---CCHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHhcCC-C-hHHHHHHHHHHHHhhcCcccchhHh
Q 022765 20 QYKHILSSVISS---NDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRL-E-PETQKEIANYTLAQIQPRVVSFEEQ 94 (292)
Q Consensus 20 ~y~~ll~~i~~~---~~~~~l~~~i~~~~~~~v~lv~sR~~l~~~~~~l~~l-~-~~~~~~~~~~~L~~i~~~~i~~E~q 94 (292)
.+..++...-.. ...+.+...|..|++.+++....+.+...|++.+... | ++.........| +...|-.+
T Consensus 32 ~l~~l~~~~~~~~~~~~~dpfe~Lv~~IlsQqts~~~a~~~~~rL~~~~G~~fPtp~~la~~~~e~L-----r~~G~~~~ 106 (233)
T 2h56_A 32 RLFQFIEIAGEVQLPTKPNPFQSLVSSIVEQQLSIKAASAIYGRVEQLVGGALEKPEQLYRVSDEAL-----RQAGVSKR 106 (233)
T ss_dssp HHHHHHHHHCCEEEECCSCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTSCCCCTHHHHTSCHHHH-----HHTTCCHH
T ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCCCHHHHHcCCHHHH-----HHcCCCHH
Confidence 455555554221 1236889999999999999999999999999988554 2 333322223333 33446666
Q ss_pred HHHHHHHHHHHHHh
Q 022765 95 VLIIREKLADLYES 108 (292)
Q Consensus 95 ~a~lr~~LA~i~E~ 108 (292)
+++--..+|+....
T Consensus 107 KA~~I~~~A~~i~~ 120 (233)
T 2h56_A 107 KIEYIRHVCEHVES 120 (233)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 56555556655443
No 204
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=29.55 E-value=2.6e+02 Score=23.62 Aligned_cols=125 Identities=11% Similarity=0.010 Sum_probs=84.2
Q ss_pred HhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcc-----c-CchHHHHHHHH
Q 022765 107 ESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVS-----S-SQQEVLNLQYK 180 (292)
Q Consensus 107 E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~-----~-~~~~~LkL~y~ 180 (292)
-+-||+..|-++...+ ++ -..|-+.++..|..+++.-||.-..|+...-- . ..|. ...
T Consensus 16 L~lg~l~~A~e~a~~l--~~----------~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~----e~L 79 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKL--ND----------SITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDV----NKL 79 (177)
T ss_dssp HHTTCHHHHHHHHHHH--CC----------HHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCH----HHH
T ss_pred HhcCCHHHHHHHHHHh--CC----------HHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCH----HHH
Confidence 3568999998887765 22 23899999999999999999999988875321 1 1222 222
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhhhhhhcCCCCCCHHHHHHHHHH------HHHHHhcCCCCchHHHHHHHHhccccc
Q 022765 181 VCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSA------AVTCTILAAAGPQRSRVLATLYKDERC 254 (292)
Q Consensus 181 ~~~ari~d~~rkFLeAa~~Y~els~~~~~~~~~~~ide~e~~~~L~~------Av~caILApagp~RSrlL~~L~kDer~ 254 (292)
.-++++...+++|.-|-+.|..+-+. +++...|.. |+.++---.++-.=.+++..+--++.-
T Consensus 80 ~kla~iA~~~g~~n~af~~~l~lGdv------------~~~i~lL~~~~r~~eA~~~A~t~g~~~~a~~~~~~~~~~~~~ 147 (177)
T 3mkq_B 80 SKMQNIAQTREDFGSMLLNTFYNNST------------KERSSIFAEGGSLPLAYAVAKANGDEAAASAFLEQAEVDEQD 147 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTCH------------HHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHCccHHHHHHHHHHcCCH------------HHHHHHHHHCCChHHHHHHHHHcCcHHHHHHHHHHhCCcccc
Confidence 47899999999999999988877654 666666644 555555433344445666665544433
Q ss_pred cCCCc
Q 022765 255 SKLKI 259 (292)
Q Consensus 255 ~~Lp~ 259 (292)
-.+|.
T Consensus 148 ~~~p~ 152 (177)
T 3mkq_B 148 VTLPD 152 (177)
T ss_dssp CCCCS
T ss_pred ccCCC
Confidence 23553
No 205
>4fjo_A DNA repair protein REV1; translesion synthesis, transferase -DNA binding protein COMP transferase-DNA binding protein complex; HET: DNA; 2.72A {Mus musculus} PDB: 2lsg_A* 2lsk_A* 2lsy_A*
Probab=25.93 E-value=1.7e+02 Score=22.12 Aligned_cols=69 Identities=13% Similarity=0.237 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHhhcCC------CHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcC
Q 022765 17 KIEQYKHILSSVISSN------DIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQP 86 (292)
Q Consensus 17 ~~~~y~~ll~~i~~~~------~~~~l~~~i~~~~~~~v~lv~sR~~l~~~~~~l~~l~~~~~~~~~~~~L~~i~~ 86 (292)
..+.++.+|..-+++. |++.+..|+..++ ++-.+--...+|.-+...+++-.++.+...-..+++.||.
T Consensus 10 ~l~dvr~~l~~Wv~~~~~P~~~DV~~l~~yL~~lv-~~~~lek~~~vlk~l~rlv~~~~~~~W~~A~~~I~~~VQ~ 84 (97)
T 4fjo_A 10 EFSDVKTLLKEWITTISDPMEEDILQVVRYCTDLI-EEKDLEKLDLVIKYMKRLMQQSVESVWNMAFDFILDNVQV 84 (97)
T ss_dssp SHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHh-hccCHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHH
Confidence 4567888888877644 5677777777777 4445666667777777666666666666666666666654
No 206
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=24.58 E-value=57 Score=26.74 Aligned_cols=33 Identities=21% Similarity=0.219 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHhccCchhhHHHHHhhhhhhcc
Q 022765 136 RLSKCVQIARLYLEDDDAVNAEAFINKASFLVS 168 (292)
Q Consensus 136 Kl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~ 168 (292)
-..-.+++|+.|..+||..+|=++.-|.+.++.
T Consensus 39 ta~~llr~A~~y~~egd~e~AYily~R~~~L~~ 71 (146)
T 2xze_A 39 SGVEIIRMASIYSEEGNIEHAFILYNKYITLFI 71 (146)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 345567888899999999999999999988885
No 207
>2yg9_A DNA-3-methyladenine glycosidase II, putative; hydrolase, DNA repair; 1.95A {Deinococcus radiodurans} PDB: 2yg8_A
Probab=24.57 E-value=1.2e+02 Score=26.13 Aligned_cols=84 Identities=10% Similarity=0.041 Sum_probs=52.1
Q ss_pred HHHHHHHHhhcC-C---CHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcCcccchhHhH
Q 022765 20 QYKHILSSVISS-N---DIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQV 95 (292)
Q Consensus 20 ~y~~ll~~i~~~-~---~~~~l~~~i~~~~~~~v~lv~sR~~l~~~~~~l~~l~~~~~~~~~~~~L~~i~~~~i~~E~q~ 95 (292)
.+..++...-.. . ..+.+...|..|++.+++....+.+...|++.+....++.......+.| +...|-.++
T Consensus 41 ~l~~l~~~~~~~~~~~~~~dpfe~Lv~~IlsQq~s~~~a~~~~~rL~~~~G~ptp~~la~~~~e~L-----r~~G~~~~K 115 (225)
T 2yg9_A 41 VLAQVTSLCGELPVLAPTPDPFGRLVRSVAGQQLSVKAAQAIYGRLEGLPGGVVPAALLKVSGDDL-----RGVGLSWAK 115 (225)
T ss_dssp HHHHHHHHHCCCCCCCCCSCHHHHHHHHHHHTTSCHHHHHHHHHHHHTSTTCSCHHHHTTSCHHHH-----HHTTCCHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHhCcChHHHHHHHHHHHHHHhCcCCHHHHHcCCHHHH-----HHCCCcHHH
Confidence 355555554333 1 2378899999999999999999999999987764433333322223333 334455666
Q ss_pred HHHHHHHHHHHHh
Q 022765 96 LIIREKLADLYES 108 (292)
Q Consensus 96 a~lr~~LA~i~E~ 108 (292)
++--..+|+....
T Consensus 116 A~~i~~lA~~~~~ 128 (225)
T 2yg9_A 116 VRTVQAAAAAAVS 128 (225)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 6655666665543
No 208
>3vu7_H DNA repair protein REV1; DNA replication, translesion DNA synthesis, damage tolerance, DNA repair, replication; HET: DNA; 2.80A {Homo sapiens} PDB: 2lsj_A*
Probab=24.01 E-value=1.8e+02 Score=23.28 Aligned_cols=68 Identities=15% Similarity=0.239 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhhcCC------CHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcC
Q 022765 18 IEQYKHILSSVISSN------DIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQP 86 (292)
Q Consensus 18 ~~~y~~ll~~i~~~~------~~~~l~~~i~~~~~~~v~lv~sR~~l~~~~~~l~~l~~~~~~~~~~~~L~~i~~ 86 (292)
.+.++.+|.+.+++. |++.|..|+..++ ++-.+--...+|.-+...+++...+.+...-..+++.||.
T Consensus 38 l~evK~lL~~Wv~s~~~P~~~DV~~l~~yL~~lV-eek~Lek~~~vlk~l~rlv~~~~~~~W~~Ay~~I~~~VQ~ 111 (124)
T 3vu7_H 38 FNDVKTLLREWITTISDPMEEDILQVVKYCTDLI-EEKDLEKLDLVIKYMKRLMQQSVESVWNMAFDFILDNVQV 111 (124)
T ss_dssp HHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHh-hcccHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHH
Confidence 445666666666432 4566666766666 3445656666666666666665566666666666665553
No 209
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=23.92 E-value=3.9e+02 Score=23.87 Aligned_cols=100 Identities=11% Similarity=-0.040 Sum_probs=74.2
Q ss_pred HHHHHHHHHHhhccHHHHHHHhccCCCCCCCccC-ChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHH
Q 022765 98 IREKLADLYESEQQWSKAAQMLSGIDLDSGMRVI-DDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLN 176 (292)
Q Consensus 98 lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~-~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~Lk 176 (292)
.+..++-++-..|+|.+|-..|... ... ++......+.-....+-.-|++..|..+..|+..-..+ +...
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a------~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~---P~~~ 207 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSA------GKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAG---EACA 207 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTG------GGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTT---TTTH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh------hccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCC---cccc
Confidence 7788999999999999999999742 223 23335567777888999999999999999999742211 1111
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 177 LQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 177 L~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
..=...++-++-..+++=+|...|..+...
T Consensus 208 ~da~~~~glaL~~lGr~deA~~~l~~a~a~ 237 (282)
T 4f3v_A 208 RAIAWYLAMARRSQGNESAAVALLEWLQTT 237 (282)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 112234566677788999999999999886
No 210
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=23.34 E-value=2.1e+02 Score=20.59 Aligned_cols=29 Identities=7% Similarity=-0.160 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHHHhhccHHHHHHHhccC
Q 022765 94 QVLIIREKLADLYESEQQWSKAAQMLSGI 122 (292)
Q Consensus 94 q~a~lr~~LA~i~E~e~~~~~AA~~L~~I 122 (292)
.-.+-+..|+.++...|+|.+|...|..+
T Consensus 41 ~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~ 69 (93)
T 3bee_A 41 YNEAALSLIANDHFISFRFQEAIDTWVLL 69 (93)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 33456677899999999999999999885
No 211
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=23.23 E-value=1.2e+02 Score=24.03 Aligned_cols=69 Identities=17% Similarity=0.256 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhcCCcchhhHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcCcccchhHhHHHHHHHHHHHHH
Q 022765 35 VQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYE 107 (292)
Q Consensus 35 ~~l~~~i~~~~~~~v~lv~sR~~l~~~~~~l~~l~~~~~~~~~~~~L~~i~~~~i~~E~q~a~lr~~LA~i~E 107 (292)
++++..-+.+..-.--||++||=|.+-...+..=||+.-|.... .=+.-+..++.-.+.|+++||+...
T Consensus 35 ~~ieeLQ~Ei~~~E~QL~iArQKLkdAe~~~E~DPDevNK~tl~----~R~~~Vsalq~KiaeLKrqLAd~va 103 (107)
T 2k48_A 35 STLQELQENITAHEQQLVTARQKLKDAEKAVEVDPDDVNKSTLQ----NRRAAVSTLETKLGELKRQLADLVA 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888887777789999999999999999989988766532 1122223678888999999998876
No 212
>4afl_A P29ING4, inhibitor of growth protein 4; cell cycle, tumour suppressor, chromatin remodelling; 2.28A {Homo sapiens}
Probab=22.65 E-value=2.5e+02 Score=21.09 Aligned_cols=21 Identities=19% Similarity=0.335 Sum_probs=16.9
Q ss_pred HHHHHHHHHhcCCChHHHHHH
Q 022765 56 QLLQTFAQELGRLEPETQKEI 76 (292)
Q Consensus 56 ~~l~~~~~~l~~l~~~~~~~~ 76 (292)
.+|.+|+..+.+||.+.....
T Consensus 4 ~yledyld~ie~LP~El~r~~ 24 (104)
T 4afl_A 4 MYLEHYLDSIENLPFELQRNF 24 (104)
T ss_dssp HHHHHHHHSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHCHHHHHHHH
Confidence 478899999999998886544
No 213
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=21.51 E-value=5.2e+02 Score=24.47 Aligned_cols=173 Identities=12% Similarity=-0.010 Sum_probs=105.7
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHhcCCc-chhhHHHHHHHHHHHhcCC---ChHHHHHHHHHHHHhhcCcccchhHhH
Q 022765 20 QYKHILSSVISSNDIVQAKKFIDHMLSDDV-PLVVSRQLLQTFAQELGRL---EPETQKEIANYTLAQIQPRVVSFEEQV 95 (292)
Q Consensus 20 ~y~~ll~~i~~~~~~~~l~~~i~~~~~~~v-~lv~sR~~l~~~~~~l~~l---~~~~~~~~~~~~L~~i~~~~i~~E~q~ 95 (292)
.|+..|+..-..++++.-..+++.+...++ |-+++=..|-..+...... ......+.+..+++.+....+.-.
T Consensus 28 ~l~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd--- 104 (501)
T 4g26_A 28 LLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPN--- 104 (501)
T ss_dssp HHHHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCC---
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCC---
Confidence 467778777777888877778888876655 3344333332222221111 112223444444554432222111
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHH
Q 022765 96 LIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVL 175 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~L 175 (292)
...-..|-..|.+.|++.+|-+++.++.-.+ +.+ -+..|--.+.-|...|+...|..+..+....=... |.
T Consensus 105 ~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g----~~P--d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~P-d~-- 175 (501)
T 4g26_A 105 EATFTNGARLAVAKDDPEMAFDMVKQMKAFG----IQP--RLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVP-EE-- 175 (501)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT----CCC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCC-CH--
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcC----CCC--ccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCC-CH--
Confidence 1122457788899999999999999875322 122 24578889999999999999999988765432221 22
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 022765 176 NLQYKVCYARILDLKRKFLEAALRYYDISQI 206 (292)
Q Consensus 176 kL~y~~~~ari~d~~rkFLeAa~~Y~els~~ 206 (292)
.-|.++++.+-..+++=+|-.-+.++-..
T Consensus 176 --~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~ 204 (501)
T 4g26_A 176 --PELAALLKVSMDTKNADKVYKTLQRLRDL 204 (501)
T ss_dssp --HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHhhCCCHHHHHHHHHHHHHh
Confidence 23566677777777777777777777653
No 214
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=20.97 E-value=1.7e+02 Score=26.72 Aligned_cols=97 Identities=8% Similarity=-0.091 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHhhcc-HHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHH
Q 022765 96 LIIREKLADLYESEQQ-WSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEV 174 (292)
Q Consensus 96 a~lr~~LA~i~E~e~~-~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~ 174 (292)
...-..++.++...|+ +.+|...+...= ...++ -...|.....+|...|++..|..+++|+..+-.+ +.
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al------~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~--~~- 200 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAII------EEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAK--NY- 200 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHH------HHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT--CH-
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHH------HHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc--CH-
Confidence 4455667888888885 888888776531 11111 2457777788888888888888888888776543 11
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 022765 175 LNLQYKVCYARILDLKRKFLEAALRYYDISQ 205 (292)
Q Consensus 175 LkL~y~~~~ari~d~~rkFLeAa~~Y~els~ 205 (292)
+-+...+.++...++|-+|-..|.....
T Consensus 201 ---~a~~~lg~~~~~~g~~~eAl~~~~~al~ 228 (382)
T 2h6f_A 201 ---HAWQHRQWVIQEFKLWDNELQYVDQLLK 228 (382)
T ss_dssp ---HHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 1122234444444555555555544433
No 215
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=20.83 E-value=1.7e+02 Score=26.99 Aligned_cols=67 Identities=10% Similarity=-0.015 Sum_probs=37.1
Q ss_pred hHHHHHHHHHHHHHhhccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhc
Q 022765 94 QVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLV 167 (292)
Q Consensus 94 q~a~lr~~LA~i~E~e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~ 167 (292)
.+....+.+++.+.+.|++.+|...|..+ +.-. +-+| ++|-..|+.+...|+...|-...++....+
T Consensus 169 ~~~~a~~~~~~~~l~~g~~~~a~~~l~~~-~~~~----P~~E--~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L 235 (388)
T 2ff4_A 169 DKVLAHTAKAEAEIACGRASAVIAELEAL-TFEH----PYRE--PLWTQLITAYYLSDRQSDALGAYRRVKTTL 235 (388)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHS----TTCH--HHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHhC----CCCH--HHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 33334445566666667777766655543 1110 1122 266666777777777766666666655544
No 216
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=20.66 E-value=4.6e+02 Score=24.88 Aligned_cols=140 Identities=13% Similarity=0.070 Sum_probs=89.1
Q ss_pred hccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhcccCchHHHHHHHHHHHHHHHH
Q 022765 109 EQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILD 188 (292)
Q Consensus 109 e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~~~~~~LkL~y~~~~ari~d 188 (292)
.|++.+|-+++.++.-.+ ..++. ..|--.++.|-..|++..|..++++....=...+ ..-|..++.-+-
T Consensus 83 ~~~l~~A~~lf~~M~~~G---~~Pd~---~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd-----~~tyn~lI~~~~ 151 (501)
T 4g26_A 83 NPGLSRGFDIFKQMIVDK---VVPNE---ATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPR-----LRSYGPALFGFC 151 (501)
T ss_dssp CHHHHHHHHHHHHHHHTT---CCCCH---HHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC-----HHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhC---CCCCH---HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCc-----cceehHHHHHHH
Confidence 456777888877764332 12232 3788889999999999999999988754322211 223556666666
Q ss_pred HhhHHHHHHHHHHHHHhhhhhhcCCCCCCHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhccccccCCCchhHHHHHHH
Q 022765 189 LKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYL 268 (292)
Q Consensus 189 ~~rkFLeAa~~Y~els~~~~~~~~~~~ide~e~~~~L~~Av~caILApagp~RSrlL~~L~kDer~~~Lp~y~iL~Kmf~ 268 (292)
..+++-+|-.-|.++-... -.-|.. +....|-+..=+.-...=-++|..+...-+.+.-..|.+|...|-
T Consensus 152 ~~g~~~~A~~l~~~M~~~G------~~Pd~~----ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~~T~~~l~~~F~ 221 (501)
T 4g26_A 152 RKGDADKAYEVDAHMVESE------VVPEEP----ELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSKSTFDMIEEWFK 221 (501)
T ss_dssp HTTCHHHHHHHHHHHHHTT------CCCCHH----HHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHhcC------CCCCHH----HHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHh
Confidence 7778878877788886631 112444 233333222222222344577788777778888889999999995
Q ss_pred h
Q 022765 269 E 269 (292)
Q Consensus 269 ~ 269 (292)
.
T Consensus 222 s 222 (501)
T 4g26_A 222 S 222 (501)
T ss_dssp S
T ss_pred c
Confidence 3
No 217
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=20.56 E-value=84 Score=29.99 Aligned_cols=31 Identities=26% Similarity=0.207 Sum_probs=29.5
Q ss_pred chHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 022765 171 QQEVLNLQYKVCYARILDLKRKFLEAALRYY 201 (292)
Q Consensus 171 ~~~~LkL~y~~~~ari~d~~rkFLeAa~~Y~ 201 (292)
+.++|.++|-..+++..-.+++|.||+.++.
T Consensus 5 ~~pdl~~~wl~~La~~h~~~~n~~EAa~cl~ 35 (428)
T 2wm9_A 5 STPELRKTWLDSMARIHVKNGDLSEAAMCYV 35 (428)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 5789999999999999999999999999996
No 218
>3i0w_A 8-oxoguanine-DNA-glycosylase; OGG, cacogg, DNA, 8-OXOG, 8OXOG, glycosylase, cytosine, hydrolase,lyase/DNA complex; HET: 8OG; 1.73A {Clostridium acetobutylicum} PDB: 3i0x_A* 3f10_A* 3f0z_A
Probab=20.45 E-value=3.6e+02 Score=24.06 Aligned_cols=120 Identities=8% Similarity=0.156 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHhcCCcchhhHHHHHHHHHHHhcC-----------CCh-HHHHHHHHHHHHhhcCcccchhHhHHHHHHH
Q 022765 34 IVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGR-----------LEP-ETQKEIANYTLAQIQPRVVSFEEQVLIIREK 101 (292)
Q Consensus 34 ~~~l~~~i~~~~~~~v~lv~sR~~l~~~~~~l~~-----------l~~-~~~~~~~~~~L~~i~~~~i~~E~q~a~lr~~ 101 (292)
.+.+...|..+++.+++....+.++..++..+.. .|+ +.........|+.. | +++ +++--..
T Consensus 113 ~dpfE~Lv~~IlsQq~s~~~a~~~~~rL~~~~G~~~~~~g~~~~~fPtpe~la~~~~e~L~~~--g-~g~---Ra~~I~~ 186 (290)
T 3i0w_A 113 QDPFEILLSFIISANNRIPMIKKCINNISEKAGKKLEYKGKIYYAFPTVDKLHEFTEKDFEEC--T-AGF---RAKYLKD 186 (290)
T ss_dssp CCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSCEEEETTEEEECCCCHHHHTTCCHHHHHHT--T-CGG---GHHHHHH
T ss_pred CCHHHHHHHHHHhCcccHHHHHHHHHHHHHHhCCCcccCCcccccCCcHHHHHCCCHHHHHHc--C-Cch---HHHHHHH
Confidence 3678999999999999999999999999998754 343 33333334455542 2 334 4554455
Q ss_pred HHHHHHhh---------ccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhccCchhhHHHHHhhhhhhccc
Q 022765 102 LADLYESE---------QQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSS 169 (292)
Q Consensus 102 LA~i~E~e---------~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le~~D~~~Ae~~~nK~s~~~~~ 169 (292)
+|+..... .+..++.+-|..|| +- | .|+.=++- ...+..-|..-..+++.|+......
T Consensus 187 ~A~~i~~g~~~l~~l~~~~~~~~~~~L~~lp--GI-G-----~~TA~~il--l~~lg~pd~fpvD~~v~r~~~rl~~ 253 (290)
T 3i0w_A 187 TVDRIYNGELNLEYIKSLNDNECHEELKKFM--GV-G-----PQVADCIM--LFSMQKYSAFPVDTWVKKAMMSLYV 253 (290)
T ss_dssp HHHHHHTTSSCHHHHHHSCHHHHHHHHTTST--TC-C-----HHHHHHHH--HHHHCCTTCCCCCHHHHHHHHHHTS
T ss_pred HHHHHHhCCCCHHHHhcCCHHHHHHHHHhCC--Cc-C-----HHHHHHHH--HHhCCCCCcceecHHHHHHHHHhcC
Confidence 66654432 25667778887653 22 2 22222222 2345555544448888888776643
No 219
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=20.38 E-value=1.3e+02 Score=22.80 Aligned_cols=60 Identities=23% Similarity=0.202 Sum_probs=38.9
Q ss_pred HHHHHHHHHHh----hccHHHHHHHhccCCCCCCCccCChHHHHHHHHHHHHHHhc----cCchhhHHHHHhhhhhh
Q 022765 98 IREKLADLYES----EQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLE----DDDAVNAEAFINKASFL 166 (292)
Q Consensus 98 lr~~LA~i~E~----e~~~~~AA~~L~~I~vEt~~~~~~~~eKl~~~l~i~rL~Le----~~D~~~Ae~~~nK~s~~ 166 (292)
-...|+.+|.. .+|+.+|.+.+..- .+.+ -..-+.....+|.. .+|+.+|..+.+|+...
T Consensus 59 a~~~Lg~~y~~G~g~~~d~~~A~~~~~~A-a~~g--------~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 59 GCRFLGDFYENGKYVKKDLRKAAQYYSKA-CGLN--------DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HHHHHHHHHHHCSSSCCCHHHHHHHHHHH-HHTT--------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCccHHHHHHHHHHH-HcCC--------CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 33567777776 67777777766542 1111 12345667777887 78888888888887654
Done!