BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>022767
MEGGSSGTRRTRSQVGPDWSSKEALILVNEIAAVEADCLKALSSYQKWKIISETCTALDV
PRTANQCRRKWDSLLDEYKKMIVRSRTFPNSQTQTHTDCFPPNFDSELFKAIHDFVMSKD
NRSDDTDPDSDTDPEADFSEAISQAQLGSKRQRRQSMRVKHCAEQKPLKSCLHENHQKSG
CTEEKLCNSHVEEEPRIRLVEKKCQNSRIKEKKSLKSCVEENEQMMVAKLQENAELIHAI
VAESADYSDADLNNVQDLESEFVRRQGDKLIACLGEIVNTLNQFTDHVQECK

High Scoring Gene Products

Symbol, full name Information P value
AT4G31270 protein from Arabidopsis thaliana 3.4e-45
AT2G33550 protein from Arabidopsis thaliana 3.4e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022767
        (292 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2128186 - symbol:AT4G31270 species:3702 "Arabi...   475  3.4e-45   1
TAIR|locus:2051174 - symbol:AT2G33550 species:3702 "Arabi...   123  3.4e-05   1


>TAIR|locus:2128186 [details] [associations]
            symbol:AT4G31270 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=RCA;TAS] [GO:0009506 "plasmodesma" evidence=IDA]
            [GO:0043687 "post-translational protein modification" evidence=RCA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=RCA] GO:GO:0009506 EMBL:CP002687 GO:GO:0003700
            EMBL:BT005287 EMBL:AK118674 IPI:IPI00541003 RefSeq:NP_194855.2
            UniGene:At.31756 ProteinModelPortal:Q8GWR8 PRIDE:Q8GWR8
            EnsemblPlants:AT4G31270.1 GeneID:829254 KEGG:ath:AT4G31270
            TAIR:At4g31270 HOGENOM:HOG000148318 InParanoid:Q8GWR8 OMA:LPANCNT
            PhylomeDB:Q8GWR8 ProtClustDB:CLSN2918239 Genevestigator:Q8GWR8
            Uniprot:Q8GWR8
        Length = 294

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 118/300 (39%), Positives = 170/300 (56%)

Query:     1 MEGGSSGTRRTRSQVGPDWSSKEALILVNEIAAVEADCLKALSSYQKWKIISETCTALDV 60
             ME G+SG+RRTRSQV P+W+ K+ L+LVNEIAAVEADC  ALSS+QKW +I+E C ALDV
Sbjct:     1 MEEGTSGSRRTRSQVAPEWAVKDCLVLVNEIAAVEADCSNALSSFQKWTMITENCNALDV 60

Query:    61 PRTANQCRRKWDSLLDEY---KKMIVRSRTFPNSQTQTHTDC-----FPPNFDSELFKAI 112
              R  NQCRRKWDSL+ +Y   KK   + R    S     +D       P + D ELF+AI
Sbjct:    61 SRNLNQCRRKWDSLMSDYNQIKKWESQYRGTGRSYWSLSSDKRKLLNLPGDIDIELFEAI 120

Query:   113 HDFVMSKDNRXXXXXXXXXXXXEA-DFSEAISQAQLGSKRQRRQSMRVKHCAEQKPLKSC 171
             +  VM +D +            +  D S  +  A +GSKR R+++M +K   +++P  S 
Sbjct:   121 NAVVMIQDEKAGTESDSDPEAQDVVDLSAEL--AFVGSKRSRQRTMVMKETKKEEPRTSR 178

Query:   172 LHENHQKSGCTEEKLCNSHVEEEPRIRLVEKKCQNSRIKEKKSLKSCVEENEQMMVAKLQ 231
             +  N      T EK   +    + +    +K  ++    E++     +EE+ ++M AKL 
Sbjct:   179 VQVN------TREKPITTKATHQNKTMGEKKPVEDMSTDEEEDETMNIEEDVEVMEAKLS 232

Query:   232 ENAELIHAIVAESADYSDADLNNVQ-DLESEFVRRQGDKLIACLGEIVNTLNQFTDHVQE 290
                +LIHAIV  +    +   + V  D + + VR+QGD+LI CL EIV+TLN+  +  QE
Sbjct:   233 YKIDLIHAIVGRNLAKDNETKDGVSMDDKLKSVRQQGDELIGCLSEIVSTLNRLHEVPQE 292


>TAIR|locus:2051174 [details] [associations]
            symbol:AT2G33550 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] InterPro:IPR009057 EMBL:CP002685 GO:GO:0003677
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR017877 PROSITE:PS50090
            EMBL:AY065364 EMBL:AY096389 IPI:IPI00526924 RefSeq:NP_850213.1
            UniGene:At.28516 ProteinModelPortal:Q8VZ20 SMR:Q8VZ20 IntAct:Q8VZ20
            PRIDE:Q8VZ20 EnsemblPlants:AT2G33550.1 GeneID:817920
            KEGG:ath:AT2G33550 TAIR:At2g33550 HOGENOM:HOG000240766
            InParanoid:Q8VZ20 OMA:EETESFW PhylomeDB:Q8VZ20
            ProtClustDB:CLSN2680007 Genevestigator:Q8VZ20 Uniprot:Q8VZ20
        Length = 314

 Score = 123 (48.4 bits), Expect = 3.4e-05, P = 3.4e-05
 Identities = 69/303 (22%), Positives = 119/303 (39%)

Query:     2 EGGSSGTRRTRSQVGPDWSSKEALILVNEIAAVEADCLK------ALSSYQ---KWKIIS 52
             +GG  G +  R    P W+ +E L+L+      E    +      AL S Q   KW  +S
Sbjct:    25 DGGDDGVKTARL---PRWTRQEILVLIQGKRVAENRVRRGRAAGMALGSGQMEPKWASVS 81

Query:    53 ETCTALDVPRTANQCRRKWDSLLDEYKKMIVRSRTFPNSQTQTHTDCF-PPNFDSELFKA 111
               C    V R   QCR++W +L  +YKK+    + +  SQ +  T+ +     D    K 
Sbjct:    82 SYCKRHGVNRGPVQCRKRWSNLAGDYKKI----KEW-ESQIKEETESYWVMRNDVRREKK 136

Query:   112 IHDFVMSK--DNRXXXXXXXXXXXXEADFSEAISQAQLGSKRQRRQSMRVKHCAEQKPLK 169
             +  F   +  D                  + A  +  L    +R    ++      K + 
Sbjct:   137 LPGFFDKEVYDIVDGGVIPPAVPVLSLGLAPASDEGLLSDLDRRESPEKLNSTPVAKSVT 196

Query:   170 SCLHENHQKSGCTEEKLCNSHVEEEPRIRLVE--KKCQNSRIKEKKSLKSCVEENEQMMV 227
               + +  Q++ C  ++      E++P    VE     Q  R +++ S     EE E+   
Sbjct:   197 DVIDKEKQEA-CVADQ--GRVKEKQPEAANVEGGSTSQEERKRKRTSFGEKEEEEEEGET 253

Query:   228 AKLQENAELIHAIVAESADYSDADLNNVQDLESEFVRRQ----GDKLIACLGEIVNTLNQ 283
              K+Q   +LI  I+  +     A L  VQ+L  +  R Q    GD L+A L ++ + + +
Sbjct:   254 KKMQN--QLIE-ILERNGQLLAAQLE-VQNLNLKLDREQRKDHGDSLVAVLNKLADAVAK 309

Query:   284 FTD 286
               D
Sbjct:   310 IAD 312


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.127   0.368    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      292       280   0.00082  115 3  11 23  0.39    34
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  223 KB (2122 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.00u 0.09s 27.09t   Elapsed:  00:00:07
  Total cpu time:  27.00u 0.09s 27.09t   Elapsed:  00:00:07
  Start:  Fri May 10 18:01:07 2013   End:  Fri May 10 18:01:14 2013

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