Your job contains 1 sequence.
>022768
MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR
VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR
PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA
DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKE
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022768
(292 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q9FXT8 - symbol:OsRPT4 "Os02g0199900 protein" s... 1460 1.4e-149 1
TAIR|locus:2028200 - symbol:AT1G45000 species:3702 "Arabi... 1446 4.3e-148 1
TAIR|locus:2159996 - symbol:RPT4A "regulatory particle tr... 1445 5.5e-148 1
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 1271 1.5e-129 1
UNIPROTKB|F1MLV1 - symbol:PSMC6 "26S protease regulatory ... 1237 6.1e-126 1
UNIPROTKB|J9P1N0 - symbol:PSMC6 "Uncharacterized protein"... 1237 6.1e-126 1
UNIPROTKB|P62333 - symbol:PSMC6 "26S protease regulatory ... 1237 6.1e-126 1
UNIPROTKB|F1SFE6 - symbol:PSMC6 "Uncharacterized protein"... 1237 6.1e-126 1
UNIPROTKB|P62335 - symbol:PSMC6 "26S protease regulatory ... 1237 6.1e-126 1
MGI|MGI:1914339 - symbol:Psmc6 "proteasome (prosome, macr... 1237 6.1e-126 1
RGD|1308825 - symbol:Psmc6 "proteasome (prosome, macropai... 1237 6.1e-126 1
RGD|2318218 - symbol:LOC100365869 "proteasome (prosome, m... 1237 6.1e-126 1
DICTYBASE|DDB_G0284517 - symbol:psmC6 "26S protease regul... 1234 1.3e-125 1
UNIPROTKB|F1NCS8 - symbol:PSMC6 "Uncharacterized protein"... 1232 2.1e-125 1
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 1232 2.1e-125 1
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 1231 2.6e-125 1
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 1231 2.6e-125 1
UNIPROTKB|Q2KIW6 - symbol:PSMC6 "26S protease regulatory ... 1230 3.4e-125 1
ZFIN|ZDB-GENE-030131-304 - symbol:psmc6 "proteasome (pros... 1222 2.4e-124 1
FB|FBgn0036224 - symbol:Rpt4R "Regulatory particle triple... 1217 8.0e-124 1
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 1166 2.0e-118 1
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 1147 2.1e-116 1
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 1111 1.4e-112 1
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 1111 1.4e-112 1
CGD|CAL0005827 - symbol:RPT4 species:5476 "Candida albica... 1109 2.2e-112 1
SGD|S000005785 - symbol:RPT4 "ATPase of the 19S regulator... 1079 3.4e-109 1
FB|FBgn0028687 - symbol:Rpt1 "Regulatory particle triple-... 795 4.2e-79 1
UNIPROTKB|Q5R8D7 - symbol:PSMC2 "26S protease regulatory ... 794 5.4e-79 1
WB|WBGene00004501 - symbol:rpt-1 species:6239 "Caenorhabd... 791 1.1e-78 1
UNIPROTKB|Q18787 - symbol:rpt-1 "26S protease regulatory ... 791 1.1e-78 1
UNIPROTKB|E1C4V5 - symbol:PSMC2 "Uncharacterized protein"... 790 1.4e-78 1
UNIPROTKB|F1NFL8 - symbol:PSMC2 "Uncharacterized protein"... 790 1.4e-78 1
UNIPROTKB|Q5E9F9 - symbol:PSMC2 "26S protease regulatory ... 790 1.4e-78 1
UNIPROTKB|F1PPH7 - symbol:PSMC2 "Uncharacterized protein"... 790 1.4e-78 1
UNIPROTKB|B7Z5E2 - symbol:PSMC2 "cDNA FLJ52353, highly si... 790 1.4e-78 1
UNIPROTKB|P35998 - symbol:PSMC2 "26S protease regulatory ... 790 1.4e-78 1
UNIPROTKB|F1SB53 - symbol:PSMC2 "Uncharacterized protein"... 790 1.4e-78 1
UNIPROTKB|I3LJ30 - symbol:I3LJ30 "Uncharacterized protein... 790 1.4e-78 1
UNIPROTKB|P46472 - symbol:psmc2 "26S protease regulatory ... 790 1.4e-78 1
UNIPROTKB|Q4R4R0 - symbol:PSMC2 "26S protease regulatory ... 790 1.4e-78 1
MGI|MGI:109555 - symbol:Psmc2 "proteasome (prosome, macro... 790 1.4e-78 1
TAIR|locus:2024822 - symbol:RPT1A "regulatory particle tr... 790 1.4e-78 1
ZFIN|ZDB-GENE-040426-1327 - symbol:psmc2 "proteasome (pro... 790 1.4e-78 1
RGD|3428 - symbol:Psmc2 "proteasome (prosome, macropain) ... 787 3.0e-78 1
UNIPROTKB|Q63347 - symbol:Psmc2 "26S protease regulatory ... 787 3.0e-78 1
SGD|S000001628 - symbol:RPT1 "ATPase of the 19S regulator... 784 6.2e-78 1
CGD|CAL0005689 - symbol:RPT1 species:5476 "Candida albica... 781 1.3e-77 1
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 779 2.1e-77 1
POMBASE|SPBC16C6.07c - symbol:rpt1 "19S proteasome regula... 777 3.4e-77 1
ASPGD|ASPL0000034636 - symbol:AN2917 species:162425 "Emer... 776 4.3e-77 1
DICTYBASE|DDB_G0276917 - symbol:psmC2 "26S proteasome ATP... 773 9.0e-77 1
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 757 4.5e-75 1
UNIPROTKB|F1NU79 - symbol:PSMC5 "Uncharacterized protein"... 754 9.3e-75 1
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 754 9.3e-75 1
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 754 9.3e-75 1
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 754 9.3e-75 1
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 754 9.3e-75 1
UNIPROTKB|Q6AZU7 - symbol:Q6AZU7 "Putative uncharacterize... 754 9.3e-75 1
UNIPROTKB|Q6P380 - symbol:psmc5 "Putative uncharacterized... 754 9.3e-75 1
MGI|MGI:105047 - symbol:Psmc5 "protease (prosome, macropa... 754 9.3e-75 1
RGD|708376 - symbol:Psmc5 "proteasome (prosome, macropain... 754 9.3e-75 1
ZFIN|ZDB-GENE-030131-6547 - symbol:psmc5 "proteasome (pro... 754 9.3e-75 1
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 753 1.2e-74 1
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 747 5.1e-74 1
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 747 5.1e-74 1
GENEDB_PFALCIPARUM|PF13_0063 - symbol:PF13_0063 "26S prot... 741 2.2e-73 1
UNIPROTKB|Q8IEK3 - symbol:PF13_0063 "26S proteasome regul... 741 2.2e-73 1
UNIPROTKB|P46470 - symbol:psmc5 "26S protease regulatory ... 739 3.6e-73 1
FB|FBgn0039788 - symbol:Rpt6R "Regulatory particle triple... 738 4.6e-73 1
TAIR|locus:2061639 - symbol:RPT2b "regulatory particle AA... 732 2.0e-72 1
TAIR|locus:2119926 - symbol:RPT2a "regulatory particle AA... 732 2.0e-72 1
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 728 5.3e-72 1
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 728 5.3e-72 1
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 728 5.3e-72 1
WB|WBGene00004506 - symbol:rpt-6 species:6239 "Caenorhabd... 728 5.3e-72 1
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 727 6.7e-72 1
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 727 6.7e-72 1
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 727 6.7e-72 1
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 727 6.7e-72 1
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 727 6.7e-72 1
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 727 6.7e-72 1
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 727 6.7e-72 1
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 727 6.7e-72 1
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 726 8.6e-72 1
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 726 8.6e-72 1
GENEDB_PFALCIPARUM|PFL2345c - symbol:PFL2345c "tat-bindin... 726 8.6e-72 1
UNIPROTKB|Q8I4U5 - symbol:PFL2345c "Tat-binding protein h... 726 8.6e-72 1
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 724 1.4e-71 1
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 722 2.3e-71 1
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 722 2.3e-71 1
WB|WBGene00018991 - symbol:F56F11.4 species:6239 "Caenorh... 722 2.3e-71 1
UNIPROTKB|H0YJC0 - symbol:PSMC6 "26S protease regulatory ... 617 4.2e-71 2
DICTYBASE|DDB_G0270784 - symbol:psmC1 "TAT binding protei... 719 4.8e-71 1
ZFIN|ZDB-GENE-040625-69 - symbol:psmc1b "proteasome (pros... 718 6.1e-71 1
ZFIN|ZDB-GENE-030131-8730 - symbol:psmc1a "proteasome (pr... 717 7.7e-71 1
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 713 2.1e-70 1
GENEDB_PFALCIPARUM|PF11_0314 - symbol:PF11_0314 "26S prot... 712 2.6e-70 1
UNIPROTKB|Q8II60 - symbol:PF11_0314 "26S protease subunit... 712 2.6e-70 1
TAIR|locus:2079742 - symbol:RPT5A "regulatory particle tr... 712 2.6e-70 1
ASPGD|ASPL0000049719 - symbol:AN2213 species:162425 "Emer... 706 1.1e-69 1
WARNING: Descriptions of 667 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 1460 (519.0 bits), Expect = 1.4e-149, P = 1.4e-149
Identities = 283/292 (96%), Positives = 291/292 (99%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR
Sbjct: 109 MTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 168
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLK+VSSAIIDKYIGESARLIREMFGY
Sbjct: 169 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGY 228
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD+LGKVKMIMATNR
Sbjct: 229 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNR 288
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PDVLDPALLRPGRLDRKIEIPLPNEQ+RME+LKIHAAGIAKHGEIDYEAVVKLAEGFNGA
Sbjct: 289 PDVLDPALLRPGRLDRKIEIPLPNEQARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGA 348
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKE 292
DLRNVCTEAGM+AIRAERDYV+HEDFMKAVRKLN+AKKLESSAHY+ADFGKE
Sbjct: 349 DLRNVCTEAGMAAIRAERDYVVHEDFMKAVRKLNDAKKLESSAHYSADFGKE 400
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 1446 (514.1 bits), Expect = 4.3e-148, P = 4.3e-148
Identities = 281/292 (96%), Positives = 288/292 (98%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMRALPREVDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLR
Sbjct: 108 MTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLR 167
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF Y
Sbjct: 168 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNY 227
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
AR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR
Sbjct: 228 AREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 287
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHA+GIAKHGEIDYEA+VKL EGFNGA
Sbjct: 288 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGA 347
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKE 292
DLRN+CTEAGM AIRAERDYVIHEDFMKAVRKL+EAKKLESS+HYNADFGKE
Sbjct: 348 DLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 1445 (513.7 bits), Expect = 5.5e-148, P = 5.5e-148
Identities = 281/292 (96%), Positives = 288/292 (98%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMRALPREVDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLR
Sbjct: 108 MTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLR 167
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF Y
Sbjct: 168 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNY 227
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
AR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD LGKVKMIMATNR
Sbjct: 228 AREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNR 287
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PDVLDPALLRPGRLDRKIEIPLPNEQSRM+ILKIHAAGIAKHGEIDYEA+VKLAEGFNGA
Sbjct: 288 PDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGA 347
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKE 292
DLRN+CTEAGM AIRAERDYVIHEDFMKAVRKL+EAKKLESS+HYNADFGKE
Sbjct: 348 DLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 1271 (452.5 bits), Expect = 1.5e-129, P = 1.5e-129
Identities = 245/285 (85%), Positives = 266/285 (93%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPG+V+YSA+GGL+DQIRELRE IELPL+NPELFLR
Sbjct: 110 MTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLR 169
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +DANFLKVVSSAI+DKYIGESARLIREMF Y
Sbjct: 170 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNY 229
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD LG+VKMIMATNR
Sbjct: 230 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNR 289
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRKIEIPLPNEQ+R+EILKIHA IAKHGEIDYEA+VKL++ FNGA
Sbjct: 290 PDSLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGA 349
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRNVCTEAG+ AIRAER+YVI DFMKAVRK+++ KKLES Y
Sbjct: 350 DLRNVCTEAGLFAIRAEREYVIQGDFMKAVRKVSDNKKLESKLDY 394
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 1237 (440.5 bits), Expect = 6.1e-126, P = 6.1e-126
Identities = 238/285 (83%), Positives = 259/285 (90%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQR 161
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNR
Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 281
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++GFNGA
Sbjct: 282 PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGA 341
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRNVCTEAGM AIRA+ D+V+ EDFMKAVRK+ ++KKLES Y
Sbjct: 342 DLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 1237 (440.5 bits), Expect = 6.1e-126, P = 6.1e-126
Identities = 238/285 (83%), Positives = 259/285 (90%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 108 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQR 167
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 168 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 227
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNR
Sbjct: 228 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 287
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++GFNGA
Sbjct: 288 PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGA 347
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRNVCTEAGM AIRA+ D+V+ EDFMKAVRK+ ++KKLES Y
Sbjct: 348 DLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 392
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 1237 (440.5 bits), Expect = 6.1e-126, P = 6.1e-126
Identities = 238/285 (83%), Positives = 259/285 (90%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQR 161
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNR
Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 281
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++GFNGA
Sbjct: 282 PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGA 341
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRNVCTEAGM AIRA+ D+V+ EDFMKAVRK+ ++KKLES Y
Sbjct: 342 DLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 1237 (440.5 bits), Expect = 6.1e-126, P = 6.1e-126
Identities = 238/285 (83%), Positives = 259/285 (90%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 116 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQR 175
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 176 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 235
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNR
Sbjct: 236 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 295
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++GFNGA
Sbjct: 296 PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGA 355
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRNVCTEAGM AIRA+ D+V+ EDFMKAVRK+ ++KKLES Y
Sbjct: 356 DLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 400
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 1237 (440.5 bits), Expect = 6.1e-126, P = 6.1e-126
Identities = 238/285 (83%), Positives = 259/285 (90%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQR 161
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNR
Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 281
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++GFNGA
Sbjct: 282 PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGA 341
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRNVCTEAGM AIRA+ D+V+ EDFMKAVRK+ ++KKLES Y
Sbjct: 342 DLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 1237 (440.5 bits), Expect = 6.1e-126, P = 6.1e-126
Identities = 238/285 (83%), Positives = 259/285 (90%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQR 161
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNR
Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 281
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++GFNGA
Sbjct: 282 PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGA 341
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRNVCTEAGM AIRA+ D+V+ EDFMKAVRK+ ++KKLES Y
Sbjct: 342 DLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 1237 (440.5 bits), Expect = 6.1e-126, P = 6.1e-126
Identities = 238/285 (83%), Positives = 259/285 (90%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 94 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQR 153
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 154 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 213
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNR
Sbjct: 214 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 273
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++GFNGA
Sbjct: 274 PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGA 333
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRNVCTEAGM AIRA+ D+V+ EDFMKAVRK+ ++KKLES Y
Sbjct: 334 DLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 378
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 1237 (440.5 bits), Expect = 6.1e-126, P = 6.1e-126
Identities = 238/285 (83%), Positives = 259/285 (90%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 116 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQR 175
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 176 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 235
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNR
Sbjct: 236 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 295
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++GFNGA
Sbjct: 296 PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGA 355
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRNVCTEAGM AIRA+ D+V+ EDFMKAVRK+ ++KKLES Y
Sbjct: 356 DLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 400
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 1234 (439.4 bits), Expect = 1.3e-125, P = 1.3e-125
Identities = 234/285 (82%), Positives = 260/285 (91%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
+TTLTI++ LPREVDP+++NM E PG+VSY +GGLS+QIRELRE +ELPLM PELF+R
Sbjct: 106 LTTLTILKILPREVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIR 165
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGIK PKGVLLYGPPGTGKTLLARAIASN++ANFLKVVSSAI+DKYIGESAR+IREMFGY
Sbjct: 166 VGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGY 225
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPC+IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L KVK+IMATNR
Sbjct: 226 ARDHQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNR 285
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PDVLDPALLRPGRLDRKIEIPLPNE R+++LKIHAA I KHG++DYEA+ KLA+GFN A
Sbjct: 286 PDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLADGFNAA 345
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRNVCTEAGM AIRAERDYV+ EDFMKAVRK EAKKLE Y
Sbjct: 346 DLRNVCTEAGMFAIRAERDYVMEEDFMKAVRKCQEAKKLEGKLDY 390
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 1232 (438.7 bits), Expect = 2.1e-125, P = 2.1e-125
Identities = 237/285 (83%), Positives = 259/285 (90%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPG+VSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 116 MTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQR 175
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 176 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 235
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNR
Sbjct: 236 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 295
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++GFNGA
Sbjct: 296 PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGA 355
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRNVCTEAGM AIRA+ D+V+ EDFMKAVRK+ ++KKLES Y
Sbjct: 356 DLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 400
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 1232 (438.7 bits), Expect = 2.1e-125, P = 2.1e-125
Identities = 237/285 (83%), Positives = 259/285 (90%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPG+VSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQR 161
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNR
Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 281
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++GFNGA
Sbjct: 282 PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGA 341
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRNVCTEAGM AIRA+ D+V+ EDFMKAVRK+ ++KKLES Y
Sbjct: 342 DLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 1231 (438.4 bits), Expect = 2.6e-125, P = 2.6e-125
Identities = 236/285 (82%), Positives = 261/285 (91%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VY M HEDPGN+SYS VGGL++QIRELRE +ELPL+NPELF R
Sbjct: 119 MTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKR 178
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LL+GPPGTGKTLLARA+AS +D NFLKVVSSAI+DKYIGESAR+IREMF Y
Sbjct: 179 VGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNY 238
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCI+FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD LGKVK+IMATNR
Sbjct: 239 ARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNR 298
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRKIEI LPNEQSR+EILKIH+ I KHGEID+EAVVKL++GF+ A
Sbjct: 299 PDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAA 358
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRNVCTEAGM AIRAER++VI EDFMKAVRK+ +AK+LE+ Y
Sbjct: 359 DLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETKLDY 403
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 1231 (438.4 bits), Expect = 2.6e-125, P = 2.6e-125
Identities = 236/285 (82%), Positives = 261/285 (91%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VY M HEDPGN+SYS VGGL++QIRELRE +ELPL+NPELF R
Sbjct: 119 MTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKR 178
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LL+GPPGTGKTLLARA+AS +D NFLKVVSSAI+DKYIGESAR+IREMF Y
Sbjct: 179 VGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNY 238
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCI+FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD LGKVK+IMATNR
Sbjct: 239 ARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNR 298
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRKIEI LPNEQSR+EILKIH+ I KHGEID+EAVVKL++GF+ A
Sbjct: 299 PDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAA 358
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRNVCTEAGM AIRAER++VI EDFMKAVRK+ +AK+LE+ Y
Sbjct: 359 DLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETKLDY 403
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 1230 (438.0 bits), Expect = 3.4e-125, P = 3.4e-125
Identities = 237/285 (83%), Positives = 258/285 (90%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQR 161
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNR
Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 281
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++GFNGA
Sbjct: 282 PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGA 341
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DL NVCTEAGM AIRA+ D+V+ EDFMKAVRK+ ++KKLES Y
Sbjct: 342 DLGNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 1222 (435.2 bits), Expect = 2.4e-124, P = 2.4e-124
Identities = 235/285 (82%), Positives = 258/285 (90%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPG+VSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQR 161
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNR
Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 281
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRKI I LPNEQ+R++ILKIH+ I KHG+IDYEA+VKL++GFNGA
Sbjct: 282 PDTLDPALLRPGRLDRKIHIELPNEQARLDILKIHSGPITKHGDIDYEAIVKLSDGFNGA 341
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRNVCTEAGM AIRA+ +YV EDFMKAVRK+ ++KKLES Y
Sbjct: 342 DLRNVCTEAGMFAIRADHEYVTQEDFMKAVRKVADSKKLESKLDY 386
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 1217 (433.5 bits), Expect = 8.0e-124, P = 8.0e-124
Identities = 233/285 (81%), Positives = 259/285 (90%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
+TTLTIMR LPREVDP+VYNM HEDPGNV+Y+ +GGL QIRELRE IELPL+NP++FLR
Sbjct: 111 VTTLTIMRYLPREVDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLR 170
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARAIAS +DANFLKVVSSAI+DKYIGESARLIREMF Y
Sbjct: 171 VGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAY 230
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD LG+VKMIMATNR
Sbjct: 231 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNR 290
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRK+EIPLPNE +RM+ILKIHA + K GEIDYEAVVKL++ FNGA
Sbjct: 291 PDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGA 350
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRN+CTEAG+ A+R +R++VI EDFMKAVRK+ + KKLES Y
Sbjct: 351 DLRNICTEAGLFALRCDREFVIQEDFMKAVRKIADNKKLESRLDY 395
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 1166 (415.5 bits), Expect = 2.0e-118, P = 2.0e-118
Identities = 223/285 (78%), Positives = 252/285 (88%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM EDPG++S++ VGGL++QIRELRE IELPL NPELFLR
Sbjct: 101 MTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLR 160
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGIKPPKGVLLYGPPGTGKTLLARA+A+++ NFLKVVSSAI+DKYIGESAR+IREMFGY
Sbjct: 161 VGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGY 220
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
A++H+PC+IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD LG+ K+IMATNR
Sbjct: 221 AKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNR 280
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRKIEIPLPNE RMEILKIH ++K GEIDYEA+VKL +G NGA
Sbjct: 281 PDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGA 340
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRNV TEAG AI+ +RDYVI D M A RK+ + KKLE + Y
Sbjct: 341 DLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKVADLKKLEGTIDY 385
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 220/285 (77%), Positives = 252/285 (88%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM EDPG ++++ +GGL+DQIRELRE IELPL NPELF R
Sbjct: 106 MTTLTIMRMLPREVDPLVYNMSLEDPGQINFAGIGGLNDQIRELREVIELPLKNPELFQR 165
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGIKPPKGVLLYGPPGTGKTLLARA+AS+++ NFLKVVSSAI+DKYIGESARLIREMFGY
Sbjct: 166 VGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGY 225
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
A++H+PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD LGK K+IMATNR
Sbjct: 226 AKEHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDYLGKTKIIMATNR 285
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLR GRLDRKIEIPLPNE R+EILKIH++ + G+ID+E+VVK+++G NGA
Sbjct: 286 PDTLDPALLRAGRLDRKIEIPLPNEVGRLEILKIHSSTVQMEGDIDFESVVKMSDGLNGA 345
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
DLRNV TEAG+ AI+ RD + +DF +AVRK+ EAKKLE Y
Sbjct: 346 DLRNVVTEAGLFAIKDYRDAINQDDFNRAVRKVAEAKKLEGKLEY 390
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
Identities = 214/291 (73%), Positives = 253/291 (86%)
Query: 1 MTTLTIMRALPREVDPVVYNMLH-----EDPGN-VSYSAVGGLSDQIRELRESIELPLMN 54
MTTLT+M+ LP EVDP+V+NM+ E+ N V+Y+ +GGLS+QIR++RE +ELP++N
Sbjct: 100 MTTLTVMKRLPCEVDPLVFNMISDIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILN 159
Query: 55 PELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLI 114
P L+ RVGIK PKGVLLYGPPGTGKTLLARA+ASNI+ NF+++V SAI+DKYIGESAR+I
Sbjct: 160 PYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARII 219
Query: 115 REMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKM 174
REMF YA++HQPCIIFMDEIDAIGGRRFS+GTSADREIQRTLMELLN LDGF++LG VK+
Sbjct: 220 REMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKI 279
Query: 175 IMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
IMATNRPDVLDPAL+RPGRLDRKIEIPLPNE +R+EILKIHA + K G+IDYE+V +L
Sbjct: 280 IMATNRPDVLDPALVRPGRLDRKIEIPLPNETARIEILKIHANKMTKLGDIDYESVCRLC 339
Query: 235 EGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
+GFNGADLRNVCTEAGM AIRA RDYVI EDF KA RK++E KKLE Y
Sbjct: 340 DGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFYKAARKISEGKKLEGKIEY 390
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
Identities = 214/291 (73%), Positives = 253/291 (86%)
Query: 1 MTTLTIMRALPREVDPVVYNMLH-----EDPGN-VSYSAVGGLSDQIRELRESIELPLMN 54
MTTLT+M+ LP EVDP+V+NM+ E+ N V+Y+ +GGLS+QIR++RE +ELP++N
Sbjct: 100 MTTLTVMKRLPCEVDPLVFNMISDIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILN 159
Query: 55 PELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLI 114
P L+ RVGIK PKGVLLYGPPGTGKTLLARA+ASNI+ NF+++V SAI+DKYIGESAR+I
Sbjct: 160 PYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARII 219
Query: 115 REMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKM 174
REMF YA++HQPCIIFMDEIDAIGGRRFS+GTSADREIQRTLMELLN LDGF++LG VK+
Sbjct: 220 REMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKI 279
Query: 175 IMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
IMATNRPDVLDPAL+RPGRLDRKIEIPLPNE +R+EILKIHA + K G+IDYE+V +L
Sbjct: 280 IMATNRPDVLDPALVRPGRLDRKIEIPLPNETARIEILKIHANKMTKLGDIDYESVCRLC 339
Query: 235 EGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
+GFNGADLRNVCTEAGM AIRA RDYVI EDF KA RK++E KKLE Y
Sbjct: 340 DGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFYKAARKISEGKKLEGKIEY 390
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
Identities = 210/285 (73%), Positives = 244/285 (85%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM +PG +S++ +GGL++QIRELRE IELPL NPELF R
Sbjct: 141 MTTLTIMRILPREVDPLVYNMTTFEPGEISFNGIGGLTEQIRELREVIELPLKNPELFTR 200
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGIKPPKGVLLYGPPGTGKTLLA+A+A+ I ANF+ +SAI+DKYIGESARLIREMF Y
Sbjct: 201 VGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASAIVDKYIGESARLIREMFAY 260
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
A++H+PCIIFMDE+DAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD LG+ K+IMATNR
Sbjct: 261 AKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLGQTKIIMATNR 320
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLR GRLDRKIEI LPNE R+EI KIH + +AK GE D+EA VK+++GFNGA
Sbjct: 321 PDTLDPALLRAGRLDRKIEIGLPNEAGRLEIFKIHTSKVAKQGEFDFEAAVKMSDGFNGA 380
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
D+RNV TEAG AIR +RDY++ D MKAVRK+ + KKLE Y
Sbjct: 381 DIRNVVTEAGFFAIRDDRDYILQNDLMKAVRKVADVKKLEGKLDY 425
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
Identities = 202/285 (70%), Positives = 240/285 (84%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
+TTLTIMR LPRE DP+VYNM + G +++ +GGL++QIRELRE IELPL NPE+F R
Sbjct: 150 ITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQR 209
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGIKPPKGVLLYGPPGTGKTLLA+A+A+ I ANF+ +S I+DKYIGESAR+IREMF Y
Sbjct: 210 VGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAY 269
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
A++H+PCIIFMDE+DAIGGRRFSEGTSADREIQRTLMELL Q+DGFD LG+ K+IMATNR
Sbjct: 270 AKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNR 329
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD LDPALLRPGRLDRK+EIPLPNE R+EI KIH A + K GE D+EA VK+++GFNGA
Sbjct: 330 PDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGA 389
Query: 241 DLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
D+RN TEAG AIR +RD++ +D MKAVRK+ E KKLE + Y
Sbjct: 390 DIRNCATEAGFFAIRDDRDHINPDDLMKAVRKVAEVKKLEGTIEY 434
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 795 (284.9 bits), Expect = 4.2e-79, P = 4.2e-79
Identities = 146/277 (52%), Positives = 203/277 (73%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M ED +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRK+E LP++ R I KIHA ++ +I ++ + +L GA++R+VCTEA
Sbjct: 333 RPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEA 392
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++AV+K+ ++ K ++ Y
Sbjct: 393 GMFAIRARRKVATEKDFLEAVKKVIKSYAKFSATPRY 429
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 148/277 (53%), Positives = 203/277 (73%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRKIE LP+ + R ILKIHA ++ +I +E + +L GA++R+VCTEA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++AV K+ ++ K ++ Y
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 146/277 (52%), Positives = 201/277 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG DQI +LRE +E PL++PE ++ +GI+PPKGV
Sbjct: 155 LPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGV 214
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LLYGPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 215 LLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 274
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDA+GG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 275 FFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 334
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRK+E LP+ R ILKIHA ++ +I Y+ + +L GA++R+VCTEA
Sbjct: 335 RPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEA 394
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++A+ K+ + K ++ Y
Sbjct: 395 GMFAIRARRKVATEKDFLEAINKVVKGYAKFSATPRY 431
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 146/277 (52%), Positives = 201/277 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG DQI +LRE +E PL++PE ++ +GI+PPKGV
Sbjct: 155 LPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGV 214
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LLYGPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 215 LLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 274
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDA+GG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 275 FFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 334
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRK+E LP+ R ILKIHA ++ +I Y+ + +L GA++R+VCTEA
Sbjct: 335 RPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEA 394
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++A+ K+ + K ++ Y
Sbjct: 395 GMFAIRARRKVATEKDFLEAINKVVKGYAKFSATPRY 431
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 147/277 (53%), Positives = 202/277 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 144 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 203
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 204 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 263
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 264 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 323
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L GA++R+VCTEA
Sbjct: 324 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 383
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++AV K+ ++ K ++ Y
Sbjct: 384 GMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 420
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 147/277 (53%), Positives = 202/277 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 152 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 211
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 212 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 271
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 272 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 331
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L GA++R+VCTEA
Sbjct: 332 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 391
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++AV K+ ++ K ++ Y
Sbjct: 392 GMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 428
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 147/277 (53%), Positives = 202/277 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L GA++R+VCTEA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++AV K+ ++ K ++ Y
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 147/277 (53%), Positives = 202/277 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L GA++R+VCTEA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++AV K+ ++ K ++ Y
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 147/277 (53%), Positives = 202/277 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 16 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 75
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 76 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 135
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 136 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 195
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L GA++R+VCTEA
Sbjct: 196 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 255
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++AV K+ ++ K ++ Y
Sbjct: 256 GMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 292
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 147/277 (53%), Positives = 202/277 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L GA++R+VCTEA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++AV K+ ++ K ++ Y
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 147/277 (53%), Positives = 202/277 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 195 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 254
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 255 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 314
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 315 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 374
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L GA++R+VCTEA
Sbjct: 375 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 434
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++AV K+ ++ K ++ Y
Sbjct: 435 GMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 471
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 147/277 (53%), Positives = 202/277 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 154 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 213
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 214 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 273
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 274 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 333
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L GA++R+VCTEA
Sbjct: 334 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 393
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++AV K+ ++ K ++ Y
Sbjct: 394 GMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 430
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 147/277 (53%), Positives = 202/277 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L GA++R+VCTEA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++AV K+ ++ K ++ Y
Sbjct: 393 GMFAIRARRKVATEKDFLEAVNKVIKSYAKFSATPRY 429
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 147/277 (53%), Positives = 202/277 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L GA++R+VCTEA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++AV K+ ++ K ++ Y
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 147/277 (53%), Positives = 202/277 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L GA++R+VCTEA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++AV K+ ++ K ++ Y
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 146/277 (52%), Positives = 203/277 (73%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGV
Sbjct: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 205
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
L YGPPGTGKTLLARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CI+
Sbjct: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DE+DAIGG RF +G D E+QRT++E++NQLDGFD G +K++MATNRPD LDPALL
Sbjct: 266 FFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRK+E LP+ +SR +I KIH + +I +E + +L GAD+R+VCTEA
Sbjct: 326 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEA 385
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R V +DF+ AV K+ + +K ++ Y
Sbjct: 386 GMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKY 422
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 147/277 (53%), Positives = 202/277 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L GA++R+VCTEA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++AV K+ ++ K ++ Y
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 147/277 (53%), Positives = 201/277 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F+ V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L GA++R+VCTEA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++AV K+ ++ K ++ Y
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 147/277 (53%), Positives = 201/277 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F+ V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L GA++R+VCTEA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
GM AIRA R +DF++AV K+ ++ K ++ Y
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 147/277 (53%), Positives = 198/277 (71%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP +DP V M E+ +V+YS VGG DQI +LRE +ELPL++PE F +GI PPKG+
Sbjct: 187 LPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGI 246
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LLYGPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CII
Sbjct: 247 LLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACII 306
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDA+GG RF +G D E+QRT++EL+ QLDGFD G +K++ ATNRP+ LDPALL
Sbjct: 307 FFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALL 366
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGR+DRK+E LP+ + R I +IH+ ++ I +E + +L GA+LR+VCTEA
Sbjct: 367 RPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEA 426
Query: 250 GMSAIRAERDYVIHEDFMKAVRK-LNEAKKLESSAHY 285
GM AIRA R +DF+KAV K ++ KK S++ Y
Sbjct: 427 GMFAIRARRKVATEKDFLKAVDKVISGYKKFSSTSRY 463
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 146/281 (51%), Positives = 201/281 (71%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I LP +DP V M E+ +V+YS VGG +QI +LRE +ELPL++PE F+++GI P
Sbjct: 160 IQLPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDP 219
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKG+LLYGPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR +
Sbjct: 220 PKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK 279
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
CIIF DE+DAIGG RF +G D E+QRT++EL+ QLDGFD G +K++ ATNRP+ LD
Sbjct: 280 ACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLD 339
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLRPGR+DRK+E LP+ + R I +IH+ ++ +I +E + +L GA+LR+V
Sbjct: 340 PALLRPGRIDRKVEFSLPDLEGRANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSV 399
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAK-KLESSAHY 285
CTEAGM AIRA R +DF+KAV K+ + K S++ Y
Sbjct: 400 CTEAGMFAIRARRKVANEKDFLKAVDKVIKGNLKFSSTSQY 440
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 149/278 (53%), Positives = 204/278 (73%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
TLT++ LP D M ++ NV Y +GGL Q++E+RE +ELPL +PELF +VG
Sbjct: 141 TLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVG 200
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I+PPKG+LLYGPPGTGKTLLA+A+A+ +A F++VV S ++ K+IGE A L++++F A+
Sbjct: 201 IEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAK 260
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+ P IIF+DEIDAI +R T DRE+QRTLM+LL ++DGFD G VK+I ATNRPD
Sbjct: 261 EKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPD 320
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADL 242
+LDPA+LRPGR DR IE+P P+E+ R+EILKIH + +++ E + K+ EG GA+L
Sbjct: 321 ILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAEL 380
Query: 243 RNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLE 280
+ +CTEAGM+AIR RDYV +DF KAV K+ E KK++
Sbjct: 381 KAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVK 418
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 146/281 (51%), Positives = 201/281 (71%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I LP ++DP V M E+ +V+Y VGG +QI LRE +ELPL++PE F+++GI P
Sbjct: 153 IQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDP 212
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKG++LYGPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR +
Sbjct: 213 PKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK 272
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
CIIF DEIDAIGG RF +G D E+QRT++EL+ QLDGFD G +K++ ATNRP+ LD
Sbjct: 273 ACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLD 332
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
AL+RPGR+DRK+E LP+ + R IL+IHA +A +I +E + +L GA+LR+V
Sbjct: 333 EALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSV 392
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 285
CTEAGM AIRA R +DF+ AV+K+ + +K S+A Y
Sbjct: 393 CTEAGMFAIRARRRVATEKDFLDAVQKVVKGNQKFSSTADY 433
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 147/281 (52%), Positives = 198/281 (70%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
IM LP ++DP V M ED +V+Y VGG +QI +LRE +E+PL++PE F+ +GI P
Sbjct: 159 IMLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDP 218
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKG LLYGPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR +
Sbjct: 219 PKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK 278
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
CIIF DEIDA+GG RF +G D E+QRT++EL+ QLDGFD G +K++ ATNRP LD
Sbjct: 279 ACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDARGNIKVMFATNRPSTLD 338
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+RPGR+DRKIE LP+ + R IL+IHA ++ +I +E + +L GA+LR+V
Sbjct: 339 PALMRPGRIDRKIEFSLPDVEGRANILRIHAKSMSVERDIRWELISRLCPNATGAELRSV 398
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAK-KLESSAHY 285
TEAGM AIRA R +DF+ AV K+ + K S+A Y
Sbjct: 399 ATEAGMFAIRARRKVATEKDFLAAVDKVIKGNLKFNSTATY 439
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 145/281 (51%), Positives = 203/281 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++D V M E+ +++Y VGG +QI +LRE +E+PL++PE F+ +GI PPKGV
Sbjct: 148 LPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGV 207
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
L+YGPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++R++F AR + CII
Sbjct: 208 LMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACII 267
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DE+DAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPALL
Sbjct: 268 FFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALL 327
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRK+E LP+ + R I IHA ++ +I +E + +L GAD+R+VCTEA
Sbjct: 328 RPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEA 387
Query: 250 GMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSA---HYN 286
GM AIRA R V +DF++A+ K+ ++ K +++ HYN
Sbjct: 388 GMFAIRARRKVVSEKDFLEAIDKVIKSYAKFSATSRYMHYN 428
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 145/269 (53%), Positives = 197/269 (73%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
T+ + LP +VDP+V M+ E + +Y VGGL QI+E++E IELP+ +PELF +GI
Sbjct: 121 TLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIA 180
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PKGVLLYGPPGTGKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR+H
Sbjct: 181 QPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREH 240
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+L
Sbjct: 241 APSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 300
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
DPALLRPGR+DRKIE P PNE++R++ILKIH+ + I+ + +L G +GA+++
Sbjct: 301 DPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 360
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKL 273
VCTEAGM A+R R +V EDF AV K+
Sbjct: 361 VCTEAGMYALRERRVHVTQEDFEMAVAKV 389
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 145/269 (53%), Positives = 196/269 (72%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +GI
Sbjct: 128 TLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIA 187
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR+H
Sbjct: 188 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREH 247
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+L
Sbjct: 248 APSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 307
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
D ALLRPGR+DRKIE P PNE++R++ILKIH+ + I+ + +L G +GA+++
Sbjct: 308 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 367
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKL 273
VCTEAGM A+R R +V EDF AV K+
Sbjct: 368 VCTEAGMYALRERRVHVTQEDFEMAVAKV 396
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 145/269 (53%), Positives = 196/269 (72%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +GI
Sbjct: 122 TLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIA 181
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR+H
Sbjct: 182 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREH 241
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+L
Sbjct: 242 APSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
D ALLRPGR+DRKIE P PNE++R++ILKIH+ + I+ + +L G +GA+++
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 361
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKL 273
VCTEAGM A+R R +V EDF AV K+
Sbjct: 362 VCTEAGMYALRERRVHVTQEDFEMAVAKV 390
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 145/269 (53%), Positives = 196/269 (72%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +GI
Sbjct: 122 TLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIA 181
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR+H
Sbjct: 182 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREH 241
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+L
Sbjct: 242 APSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
D ALLRPGR+DRKIE P PNE++R++ILKIH+ + I+ + +L G +GA+++
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 361
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKL 273
VCTEAGM A+R R +V EDF AV K+
Sbjct: 362 VCTEAGMYALRERRVHVTQEDFEMAVAKV 390
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 145/269 (53%), Positives = 196/269 (72%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +GI
Sbjct: 122 TLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIA 181
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR+H
Sbjct: 182 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREH 241
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+L
Sbjct: 242 APSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
D ALLRPGR+DRKIE P PNE++R++ILKIH+ + I+ + +L G +GA+++
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 361
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKL 273
VCTEAGM A+R R +V EDF AV K+
Sbjct: 362 VCTEAGMYALRERRVHVTQEDFEMAVAKV 390
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 145/269 (53%), Positives = 196/269 (72%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +GI
Sbjct: 122 TLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIA 181
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR+H
Sbjct: 182 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREH 241
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+L
Sbjct: 242 APSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
D ALLRPGR+DRKIE P PNE++R++ILKIH+ + I+ + +L G +GA+++
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 361
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKL 273
VCTEAGM A+R R +V EDF AV K+
Sbjct: 362 VCTEAGMYALRERRVHVTQEDFEMAVAKV 390
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 145/269 (53%), Positives = 196/269 (72%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +GI
Sbjct: 130 TLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIA 189
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR+H
Sbjct: 190 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREH 249
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+L
Sbjct: 250 APSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 309
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
D ALLRPGR+DRKIE P PNE++R++ILKIH+ + I+ + +L G +GA+++
Sbjct: 310 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 369
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKL 273
VCTEAGM A+R R +V EDF AV K+
Sbjct: 370 VCTEAGMYALRERRVHVTQEDFEMAVAKV 398
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 145/269 (53%), Positives = 196/269 (72%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +GI
Sbjct: 130 TLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIA 189
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR+H
Sbjct: 190 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREH 249
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+L
Sbjct: 250 APSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 309
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
D ALLRPGR+DRKIE P PNE++R++ILKIH+ + I+ + +L G +GA+++
Sbjct: 310 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 369
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKL 273
VCTEAGM A+R R +V EDF AV K+
Sbjct: 370 VCTEAGMYALRERRVHVTQEDFEMAVAKV 398
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 145/269 (53%), Positives = 196/269 (72%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +GI
Sbjct: 122 TLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIA 181
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR+H
Sbjct: 182 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREH 241
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+L
Sbjct: 242 APSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
D ALLRPGR+DRKIE P PNE++R++ILKIH+ + I+ + +L G +GA+++
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 361
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKL 273
VCTEAGM A+R R +V EDF AV K+
Sbjct: 362 VCTEAGMYALRERRVHVTQEDFEMAVAKV 390
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 145/269 (53%), Positives = 196/269 (72%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +GI
Sbjct: 122 TLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIA 181
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR+H
Sbjct: 182 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREH 241
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+L
Sbjct: 242 APSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
D ALLRPGR+DRKIE P PNE++R++ILKIH+ + I+ + +L G +GA+++
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 361
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKL 273
VCTEAGM A+R R +V EDF AV K+
Sbjct: 362 VCTEAGMYALRERRVHVTQEDFEMAVAKV 390
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 145/269 (53%), Positives = 196/269 (72%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +GI
Sbjct: 122 TLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIA 181
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR+H
Sbjct: 182 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREH 241
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+L
Sbjct: 242 APSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
D ALLRPGR+DRKIE P PNE++R++ILKIH+ + I+ + +L G +GA+++
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 361
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKL 273
VCTEAGM A+R R +V EDF AV K+
Sbjct: 362 VCTEAGMYALRERRVHVTQEDFEMAVAKV 390
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 150/279 (53%), Positives = 201/279 (72%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
+++ LP +VDP+V M+ E + +Y VGGL QI+E++E IELP+ +PELF +GI
Sbjct: 119 LIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQ 178
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKG+LLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AR+H
Sbjct: 179 PKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHA 238
Query: 126 PCIIFMDEIDAIGGRRF-SEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIFMDEID+IG R S G S D E+QRT++ELLNQLDGF+ +K+IMATNR D+L
Sbjct: 239 PSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 298
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
DPALLRPGR+DRKIE P P+ ++R EIL+IH+ + ID +++ + G +GA+L+
Sbjct: 299 DPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKG 358
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRK-LNEAKKLESS 282
VCTEAGM A+R R +V EDF AV K LN+ E S
Sbjct: 359 VCTEAGMFALRERRVHVTQEDFELAVAKVLNKGDSGEMS 397
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 146/265 (55%), Positives = 193/265 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP +VDP+V M E + +Y +GGL QI+E++E IELP+ +PELF +GI PKGV
Sbjct: 139 LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGV 198
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AR+H P II
Sbjct: 199 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSII 258
Query: 130 FMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPAL 188
FMDEID+IG R G+ + D E+QRT++ELLNQLDGF+ K+K++MATNR D+LD AL
Sbjct: 259 FMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQAL 318
Query: 189 LRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTE 248
LRPGR+DRKIE P PNE+SR +ILKIH+ + ID + + + G +GA+L+ VCTE
Sbjct: 319 LRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTE 378
Query: 249 AGMSAIRAERDYVIHEDFMKAVRKL 273
AGM A+R R +V EDF AV K+
Sbjct: 379 AGMFALRERRVHVTQEDFEMAVAKV 403
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 146/265 (55%), Positives = 193/265 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP +VDP+V M E + +Y +GGL QI+E++E IELP+ +PELF +GI PKGV
Sbjct: 139 LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGV 198
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AR+H P II
Sbjct: 199 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSII 258
Query: 130 FMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPAL 188
FMDEID+IG R G+ + D E+QRT++ELLNQLDGF+ K+K++MATNR D+LD AL
Sbjct: 259 FMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQAL 318
Query: 189 LRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTE 248
LRPGR+DRKIE P PNE+SR +ILKIH+ + ID + + + G +GA+L+ VCTE
Sbjct: 319 LRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTE 378
Query: 249 AGMSAIRAERDYVIHEDFMKAVRKL 273
AGM A+R R +V EDF AV K+
Sbjct: 379 AGMFALRERRVHVTQEDFEMAVAKV 403
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 137/285 (48%), Positives = 198/285 (69%)
Query: 2 TTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRV 61
T I LP ++DP V M E+ +++Y+ +GG +Q+ +LRE +E+PL+ PE F+ +
Sbjct: 132 TKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTL 191
Query: 62 GIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYA 121
GI PPKGVLLYGPPGTGKTL ARAIA+ DA F+ V+ S ++ KY+GE AR++RE+F A
Sbjct: 192 GIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMA 251
Query: 122 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRP 181
+ + CI+F+DE+DAIGG R E D E+QRT++E++NQLDGFD G +K++MATNRP
Sbjct: 252 KSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRP 311
Query: 182 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 241
D LD AL+RPGR+DR+IE LP+ + R I KIHA + ++ +E + +L G+D
Sbjct: 312 DTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSD 371
Query: 242 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRK-LNEAKKLESSAHY 285
+R+VCTEAGM AIRA R + +D + A+ K ++ K+ ++ Y
Sbjct: 372 IRSVCTEAGMFAIRARRKTITEKDLLLAINKVIHGCKQFSATGKY 416
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 137/285 (48%), Positives = 198/285 (69%)
Query: 2 TTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRV 61
T I LP ++DP V M E+ +++Y+ +GG +Q+ +LRE +E+PL+ PE F+ +
Sbjct: 132 TKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTL 191
Query: 62 GIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYA 121
GI PPKGVLLYGPPGTGKTL ARAIA+ DA F+ V+ S ++ KY+GE AR++RE+F A
Sbjct: 192 GIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMA 251
Query: 122 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRP 181
+ + CI+F+DE+DAIGG R E D E+QRT++E++NQLDGFD G +K++MATNRP
Sbjct: 252 KSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRP 311
Query: 182 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 241
D LD AL+RPGR+DR+IE LP+ + R I KIHA + ++ +E + +L G+D
Sbjct: 312 DTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSD 371
Query: 242 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRK-LNEAKKLESSAHY 285
+R+VCTEAGM AIRA R + +D + A+ K ++ K+ ++ Y
Sbjct: 372 IRSVCTEAGMFAIRARRKTITEKDLLLAINKVIHGCKQFSATGKY 416
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 144/269 (53%), Positives = 195/269 (72%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PE F +GI
Sbjct: 117 TLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIA 176
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR+H
Sbjct: 177 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREH 236
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+L
Sbjct: 237 APSIIFMDEIDSIGSR-LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 295
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
D ALLRPGR+DRKIE P PNE++R++ILKIH+ + I+ + +L G +GA+++
Sbjct: 296 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 355
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKL 273
VCTEAGM A+R R +V EDF AV K+
Sbjct: 356 VCTEAGMYALRERRVHVTQEDFEMAVAKV 384
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
Identities = 146/269 (54%), Positives = 195/269 (72%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
T+ + LP +VDP+V ML E + +Y VGGL QI+E++E IELP+ +PELF +GI
Sbjct: 116 TLHKILPNKVDPLVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGIT 175
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PKGVLLYGPPGTGKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR+H
Sbjct: 176 QPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREH 235
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIFMDEID+IG R GT D E+QRT++ELLNQLDGF+ +K+IMATNR DVL
Sbjct: 236 APSIIFMDEIDSIGSARLETGTG-DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVL 294
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
D ALLRPGR+DRKIE P PNE++R++ILKIH+ + I+ + + G +GA+++
Sbjct: 295 DQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKG 354
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKL 273
VCTEAGM A+R R +V EDF AV K+
Sbjct: 355 VCTEAGMYALRERRVHVTQEDFEMAVSKV 383
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 142/275 (51%), Positives = 198/275 (72%)
Query: 4 LTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGI 63
L+++ L EVDP+V M E SY+ +GGL QI+E++E++ELPL +PEL+ +GI
Sbjct: 160 LSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGI 219
Query: 64 KPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARD 123
KPPKGV+LYG PGTGKTLLA+A+A++ A FL+VV S +I KY+G+ +L+RE+F A D
Sbjct: 220 KPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADD 279
Query: 124 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDV 183
P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD G VK+I+ATNR +
Sbjct: 280 LSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIES 339
Query: 184 LDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLR 243
LDPALLRPGR+DRKIE PLP+ ++R I +IH + + +++ E V + F+GAD++
Sbjct: 340 LDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIK 399
Query: 244 NVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 278
+CTEAG+ A+R R V H DF KA K+ KK
Sbjct: 400 AICTEAGLLALRERRMKVTHVDFKKAKEKVMFKKK 434
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 142/275 (51%), Positives = 198/275 (72%)
Query: 4 LTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGI 63
L+++ L EVDP+V M E SY+ +GGL QI+E++E++ELPL +PEL+ +GI
Sbjct: 160 LSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGI 219
Query: 64 KPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARD 123
KPPKGV+LYG PGTGKTLLA+A+A++ A FL+VV S +I KY+G+ +L+RE+F A D
Sbjct: 220 KPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADD 279
Query: 124 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDV 183
P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD G VK+I+ATNR +
Sbjct: 280 LSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIES 339
Query: 184 LDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLR 243
LDPALLRPGR+DRKIE PLP+ ++R I +IH + + +++ E V + F+GAD++
Sbjct: 340 LDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIK 399
Query: 244 NVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 278
+CTEAG+ A+R R V H DF KA K+ KK
Sbjct: 400 AICTEAGLLALRERRMKVTHPDFKKAKEKVMFKKK 434
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 141/268 (52%), Positives = 190/268 (70%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
+ + LP +VDP+V M+ E + +Y VGGL QI+E++E IELP+ +PELF +GI
Sbjct: 118 LYKILPTKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQ 177
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGV+LYGPPGTGKTLLARA+A + + F++V S ++ KYIGE +R++RE+F AR+H
Sbjct: 178 PKGVILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHA 237
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIFMDEID+IG R + D E+QRT++ELLNQLDGF+ +K+IMATNR D+LD
Sbjct: 238 PSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILD 297
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLRPGR+DRKIE P P +R +ILKIH+ + I+ + + G +GAD++ V
Sbjct: 298 PALLRPGRIDRKIEFPAPTVAARTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGV 357
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKL 273
CTEAGM A+R R +V EDF AV K+
Sbjct: 358 CTEAGMYALRERRIHVTQEDFELAVAKV 385
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 133/264 (50%), Positives = 193/264 (73%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE + +GIKP
Sbjct: 158 VIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 217
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H
Sbjct: 218 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA 277
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LD
Sbjct: 278 PSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 337
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +
Sbjct: 338 PALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAI 397
Query: 246 CTEAGMSAIRAERDYVIHEDFMKA 269
CTEAG+ A+R R V +EDF K+
Sbjct: 398 CTEAGLMALRERRMKVTNEDFKKS 421
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 133/264 (50%), Positives = 193/264 (73%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE + +GIKP
Sbjct: 157 VIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 216
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H
Sbjct: 217 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA 276
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LD
Sbjct: 277 PSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 336
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +
Sbjct: 337 PALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAI 396
Query: 246 CTEAGMSAIRAERDYVIHEDFMKA 269
CTEAG+ A+R R V +EDF K+
Sbjct: 397 CTEAGLMALRERRMKVTNEDFKKS 420
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 141/266 (53%), Positives = 193/266 (72%)
Query: 8 RALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPK 67
+ LP +VDP+V M+ E + +Y VGGL QI+E++E IELP+ +PELF +GI PK
Sbjct: 135 KLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 194
Query: 68 GVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPC 127
GVLL+GPPGTGKTLLARA+A + + F++V S ++ K+IGE AR++RE+F AR+H P
Sbjct: 195 GVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS 254
Query: 128 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPA 187
IIFMDEID+IG R + D E+QRT++ELLNQLDGF+ +K+IMATNR D+LDPA
Sbjct: 255 IIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPA 314
Query: 188 LLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCT 247
LLRPGR+DRKIE P P+E++R +ILKIH+ + I+ + + G +GA++++VCT
Sbjct: 315 LLRPGRIDRKIEFPAPDEKARADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCT 374
Query: 248 EAGMSAIRAERDYVIHEDFMKAVRKL 273
EAGM A+R R +V EDF AV K+
Sbjct: 375 EAGMFALRERRIHVTQEDFEMAVGKV 400
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 133/264 (50%), Positives = 193/264 (73%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE + +GIKP
Sbjct: 159 VIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHG 278
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LD
Sbjct: 279 PSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 338
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +
Sbjct: 339 PALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAI 398
Query: 246 CTEAGMSAIRAERDYVIHEDFMKA 269
CTEAG+ A+R R V +EDF K+
Sbjct: 399 CTEAGLMALRERRMKVTNEDFKKS 422
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 133/264 (50%), Positives = 193/264 (73%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE + +GIKP
Sbjct: 159 VIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA 278
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LD
Sbjct: 279 PSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 338
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +
Sbjct: 339 PALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAI 398
Query: 246 CTEAGMSAIRAERDYVIHEDFMKA 269
CTEAG+ A+R R V +EDF K+
Sbjct: 399 CTEAGLMALRERRMKVTNEDFKKS 422
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 133/264 (50%), Positives = 193/264 (73%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE + +GIKP
Sbjct: 159 VIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA 278
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LD
Sbjct: 279 PSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 338
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +
Sbjct: 339 PALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAI 398
Query: 246 CTEAGMSAIRAERDYVIHEDFMKA 269
CTEAG+ A+R R V +EDF K+
Sbjct: 399 CTEAGLMALRERRMKVTNEDFKKS 422
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 133/264 (50%), Positives = 193/264 (73%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE + +GIKP
Sbjct: 86 VIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 145
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H
Sbjct: 146 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA 205
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LD
Sbjct: 206 PSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 265
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +
Sbjct: 266 PALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAI 325
Query: 246 CTEAGMSAIRAERDYVIHEDFMKA 269
CTEAG+ A+R R V +EDF K+
Sbjct: 326 CTEAGLMALRERRMKVTNEDFKKS 349
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 133/264 (50%), Positives = 193/264 (73%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE + +GIKP
Sbjct: 159 VIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA 278
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LD
Sbjct: 279 PSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 338
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +
Sbjct: 339 PALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAI 398
Query: 246 CTEAGMSAIRAERDYVIHEDFMKA 269
CTEAG+ A+R R V +EDF K+
Sbjct: 399 CTEAGLMALRERRMKVTNEDFKKS 422
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 133/264 (50%), Positives = 193/264 (73%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE + +GIKP
Sbjct: 159 VIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA 278
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LD
Sbjct: 279 PSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 338
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +
Sbjct: 339 PALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAI 398
Query: 246 CTEAGMSAIRAERDYVIHEDFMKA 269
CTEAG+ A+R R V +EDF K+
Sbjct: 399 CTEAGLMALRERRMKVTNEDFKKS 422
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 133/264 (50%), Positives = 193/264 (73%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE + +GIKP
Sbjct: 159 VIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA 278
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LD
Sbjct: 279 PSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 338
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +
Sbjct: 339 PALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAI 398
Query: 246 CTEAGMSAIRAERDYVIHEDFMKA 269
CTEAG+ A+R R V +EDF K+
Sbjct: 399 CTEAGLMALRERRMKVTNEDFKKS 422
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 133/264 (50%), Positives = 193/264 (73%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE + +GIKP
Sbjct: 159 VIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA 278
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LD
Sbjct: 279 PSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 338
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +
Sbjct: 339 PALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAI 398
Query: 246 CTEAGMSAIRAERDYVIHEDFMKA 269
CTEAG+ A+R R V +EDF K+
Sbjct: 399 CTEAGLMALRERRMKVTNEDFKKS 422
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 146/283 (51%), Positives = 196/283 (69%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
T+ R LP ++DP+V M E + +Y VGGL QI+E++E IELP+ +PELF +GI
Sbjct: 118 TLHRILPNKIDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIA 177
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AR+H
Sbjct: 178 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREH 237
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSA-DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDV 183
P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K++M TNR D+
Sbjct: 238 APSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDI 297
Query: 184 LDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLR 243
LDPALLRPGR+DRKIE P P + R++ILKIH+ + I+ + + G +GA+L+
Sbjct: 298 LDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELK 357
Query: 244 NVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYN 286
VCTEAGM A+R R +V EDF AV K+ + K E + N
Sbjct: 358 AVCTEAGMYALRERRVHVSQEDFEMAVSKVMK-KDSEQNMSIN 399
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 134/273 (49%), Positives = 194/273 (71%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ L + DP+V M E +Y+ +GGL QI+E++ES+ELPL +PE + +GIKP
Sbjct: 158 VVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKP 217
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H
Sbjct: 218 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA 277
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LD
Sbjct: 278 PSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 337
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+RPGR+DRKIE PLP+E+++ I IH + + +++ ++ + +GAD++ +
Sbjct: 338 PALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAI 397
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 278
CTEAG+ A+R R V +EDF K+ + KK
Sbjct: 398 CTEAGLMALRERRMKVTNEDFKKSKESVLYRKK 430
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 146/273 (53%), Positives = 193/273 (70%)
Query: 8 RALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPK 67
+ LP +VDP+V M E + +Y VGGL Q++E++E IELP+ +PE+F +GI PK
Sbjct: 155 KILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPK 214
Query: 68 GVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPC 127
GVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AR+H P
Sbjct: 215 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 274
Query: 128 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPA 187
IIFMDEID+IG +R EG D E+QRT+MELLNQLDGF+ +K+IM TNR D+LD A
Sbjct: 275 IIFMDEIDSIGSQRI-EGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEA 333
Query: 188 LLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCT 247
LLRPGR+DRKIE P PN ++RMEILKIH+ + ID + +GA+++ VCT
Sbjct: 334 LLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCT 393
Query: 248 EAGMSAIRAERDYVIHEDFMKAVRKL--NEAKK 278
EAGM A+R R +V EDF AV K+ +A+K
Sbjct: 394 EAGMFALRERRVHVTQEDFEMAVAKVMKQDAEK 426
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 146/273 (53%), Positives = 193/273 (70%)
Query: 8 RALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPK 67
+ LP +VDP+V M E + +Y VGGL Q++E++E IELP+ +PE+F +GI PK
Sbjct: 155 KILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPK 214
Query: 68 GVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPC 127
GVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AR+H P
Sbjct: 215 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 274
Query: 128 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPA 187
IIFMDEID+IG +R EG D E+QRT+MELLNQLDGF+ +K+IM TNR D+LD A
Sbjct: 275 IIFMDEIDSIGSQRI-EGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEA 333
Query: 188 LLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCT 247
LLRPGR+DRKIE P PN ++RMEILKIH+ + ID + +GA+++ VCT
Sbjct: 334 LLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCT 393
Query: 248 EAGMSAIRAERDYVIHEDFMKAVRKL--NEAKK 278
EAGM A+R R +V EDF AV K+ +A+K
Sbjct: 394 EAGMFALRERRVHVTQEDFEMAVAKVMKQDAEK 426
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 141/266 (53%), Positives = 188/266 (70%)
Query: 8 RALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPK 67
+ LP VDP+V M+ E + +Y +GGL QI+E++E IEL L +PELF +GI PK
Sbjct: 108 KMLPSSVDPLVSLMMVEKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPK 167
Query: 68 GVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPC 127
GVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AR+H P
Sbjct: 168 GVLLYGPPGTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 227
Query: 128 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPA 187
IIFMDEID+IG R S D E+QRT++ELLNQLDGF+ +K+IMATNR D+LDPA
Sbjct: 228 IIFMDEIDSIGSSRIDSAGSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPA 287
Query: 188 LLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCT 247
LLRPGR+DRKIE P P+ ++R +IL+IH+ + I+ + + G +GA+L+ VCT
Sbjct: 288 LLRPGRIDRKIEFPPPSVEARADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCT 347
Query: 248 EAGMSAIRAERDYVIHEDFMKAVRKL 273
EAGM A+R R +V EDF A K+
Sbjct: 348 EAGMYALRERRVHVTQEDFDLATAKI 373
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 139/276 (50%), Positives = 195/276 (70%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
T +++ L EVDP+V M E SY+ +GGL QI+E++E++ELPL +PEL+ +G
Sbjct: 164 TNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIG 223
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
IKPPKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+REMF A
Sbjct: 224 IKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAE 283
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+H P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR D
Sbjct: 284 EHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRID 343
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADL 242
LDPAL+RPGR+DRKI++P P+ +++ I +IH + + ++D E V + +GAD+
Sbjct: 344 SLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADI 403
Query: 243 RNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 278
+ +CTEAG+ A+R R + D KA K KK
Sbjct: 404 KAICTEAGLLALRERRMKITQADLRKARDKALFQKK 439
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 139/276 (50%), Positives = 195/276 (70%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
T +++ L EVDP+V M E SY+ +GGL QI+E++E++ELPL +PEL+ +G
Sbjct: 164 TNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIG 223
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
IKPPKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+REMF A
Sbjct: 224 IKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAE 283
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+H P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR D
Sbjct: 284 EHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRID 343
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADL 242
LDPAL+RPGR+DRKI++P P+ +++ I +IH + + ++D E V + +GAD+
Sbjct: 344 SLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADI 403
Query: 243 RNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 278
+ +CTEAG+ A+R R + D KA K KK
Sbjct: 404 KAICTEAGLLALRERRMKITQADLRKARDKALFQKK 439
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 142/268 (52%), Positives = 191/268 (71%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I LP +VDP+V M+ E + +Y VGGL QI+E++E IELP+ +PELF +GI
Sbjct: 149 IHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQ 208
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVLLYGPPGTGKTLLARA+A + + F++V S ++ K+IGE AR++RE+F AR+H
Sbjct: 209 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 268
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIFMDEID+IG R D E+QRT++ELLNQLDGF+ +K+IMATNR D+LD
Sbjct: 269 PSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 328
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
ALLRPGR+DRKIE P P+E++R +ILKIH+ + I + + + G +GA++++V
Sbjct: 329 SALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSV 388
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKL 273
CTEAGM A+R R +V EDF AV K+
Sbjct: 389 CTEAGMFALRERRIHVTQEDFEMAVGKV 416
>UNIPROTKB|H0YJC0 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0017111
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000556813 Uniprot:H0YJC0
Length = 262
Score = 617 (222.3 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 119/137 (86%), Positives = 126/137 (91%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQR 161
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 121 ARDHQPCIIFMDEIDAI 137
ARDHQPCIIFMDEIDAI
Sbjct: 222 ARDHQPCIIFMDEIDAI 238
Score = 121 (47.7 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 22/25 (88%), Positives = 25/25 (100%)
Query: 225 IDYEAVVKLAEGFNGADLRNVCTEA 249
IDYEA+VKL++GFNGADLRNVCTEA
Sbjct: 238 IDYEAIVKLSDGFNGADLRNVCTEA 262
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 137/271 (50%), Positives = 195/271 (71%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
TL+++ + EVDP+V M E SYS +GGL Q++E++E+IELPL +PEL+ +G
Sbjct: 155 TLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIG 214
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
IKPPKGV+LYG PGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A
Sbjct: 215 IKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAD 274
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+ P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD VK+IMATNR +
Sbjct: 275 ECAPSIVFIDEIDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIMATNRIE 334
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADL 242
LDPAL+RPGR+DRKIE PLP+ +++ +I +IH A + +++ E V + +GAD+
Sbjct: 335 TLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADI 394
Query: 243 RNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 273
+ +CTE+G+ A+R R V H DF KA K+
Sbjct: 395 KAICTESGLLALRERRMRVTHTDFKKAKEKV 425
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 132/264 (50%), Positives = 192/264 (72%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE + +GIKP
Sbjct: 159 VIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGV+LYG PGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H
Sbjct: 219 PKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA 278
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LD
Sbjct: 279 PSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 338
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +
Sbjct: 339 PALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAI 398
Query: 246 CTEAGMSAIRAERDYVIHEDFMKA 269
CTEAG+ A+R R V +EDF K+
Sbjct: 399 CTEAGLMALRERRMKVTNEDFKKS 422
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 132/264 (50%), Positives = 191/264 (72%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ L + DP+V M E +Y+ +GGL QI+E++ES+ELPL +PE + +GIKP
Sbjct: 159 VIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKP 218
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGV+LYG PGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H
Sbjct: 219 PKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA 278
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LD
Sbjct: 279 PSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 338
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +
Sbjct: 339 PALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAI 398
Query: 246 CTEAGMSAIRAERDYVIHEDFMKA 269
CTEAG+ A+R R V +EDF K+
Sbjct: 399 CTEAGLMALRERRMKVTNEDFKKS 422
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 140/266 (52%), Positives = 188/266 (70%)
Query: 8 RALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPK 67
+ L + DP+V M+ E + +Y VGGL+ QI+E++E IELP+ +PELF +GI PK
Sbjct: 124 KVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPK 183
Query: 68 GVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPC 127
GV+LYGPPGTGKTLLARA+A + D F++V + ++ KYIGE +R++RE+F AR+H P
Sbjct: 184 GVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPS 243
Query: 128 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPA 187
IIFMDEID+IG R D E+QRT++ELLNQLDGF+ +K+IMATNR D+LDPA
Sbjct: 244 IIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPA 303
Query: 188 LLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCT 247
LLRPGR+DRKIE P P+ +R EIL+IH+ + I+ V + G +GAD++ VCT
Sbjct: 304 LLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCT 363
Query: 248 EAGMSAIRAERDYVIHEDFMKAVRKL 273
EAGM A+R R +V EDF AV K+
Sbjct: 364 EAGMYALRERRIHVTQEDFELAVGKV 389
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 142/281 (50%), Positives = 195/281 (69%)
Query: 6 IMRALPREVDPVVYNM-LHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
I+ LP+E D V M + E P YS +GGL QI +L E+I LP+++ E F ++GIK
Sbjct: 160 IIDKLPQEYDNRVKAMEVIEKPSE-DYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIK 218
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PPKGVL++GPPGTGKTLLARA AS +A FLK+ ++ +IG+ A+++R+ F A++
Sbjct: 219 PPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEK 278
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIF+DE+DAIG +RF S DRE+QRT++ELLNQLDGF VK+I ATNRPD L
Sbjct: 279 APAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTL 338
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
DPALLR GRLDRKIE+P PNE+SR IL+IH+ + H ++++E + + + FNGA L+
Sbjct: 339 DPALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKA 398
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
VC EAGM A+R + HEDF++ + + KK S+ +Y
Sbjct: 399 VCVEAGMIALRRGATEIDHEDFVEGITSVLSKKK--STLNY 437
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 142/281 (50%), Positives = 195/281 (69%)
Query: 6 IMRALPREVDPVVYNM-LHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
I+ LP+E D V M + E P YS +GGL QI +L E+I LP+++ E F ++GIK
Sbjct: 160 IIDKLPQEYDNRVKAMEVIEKPSE-DYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIK 218
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PPKGVL++GPPGTGKTLLARA AS +A FLK+ ++ +IG+ A+++R+ F A++
Sbjct: 219 PPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEK 278
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIF+DE+DAIG +RF S DRE+QRT++ELLNQLDGF VK+I ATNRPD L
Sbjct: 279 APAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTL 338
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
DPALLR GRLDRKIE+P PNE+SR IL+IH+ + H ++++E + + + FNGA L+
Sbjct: 339 DPALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKA 398
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
VC EAGM A+R + HEDF++ + + KK S+ +Y
Sbjct: 399 VCVEAGMIALRRGATEIDHEDFVEGITSVLSKKK--STLNY 437
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 138/280 (49%), Positives = 195/280 (69%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ Y+ +GGL QI+EL E+I LP+ + E F ++G++P
Sbjct: 145 ILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRP 204
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVLLYGPPGTGKTL+ARA A+ +A FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 205 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKA 264
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQLDGF ++K+I ATNR D+LD
Sbjct: 265 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILD 324
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+R GRLDRKIE P P E++R IL+IH+ + H ++++E + + + FNGA L+ V
Sbjct: 325 PALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAV 384
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R + V HEDF + + ++ +AKK S +Y
Sbjct: 385 CVEAGMLALRRDATEVNHEDFNEGIIQV-QAKKKASLNYY 423
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 131/276 (47%), Positives = 196/276 (71%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
T++++ L E DP+V M + SY+ +GGL QI+E+RES+ELPL++PEL+ +G
Sbjct: 175 TVSVVGVLTEESDPLVSVMKLDKAPTESYADIGGLESQIQEVRESVELPLLHPELYEEMG 234
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
IKPPKGV+LYG PGTGKTLLA+A+A+ A FL++V S +I KY+G+ RL+R++F A
Sbjct: 235 IKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAA 294
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+H P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATN+ +
Sbjct: 295 EHAPSIVFIDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIE 354
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADL 242
LDPAL+RPGR+DRKI P++ ++ +I +H + ++ ++D + + + +GAD+
Sbjct: 355 TLDPALIRPGRIDRKILFENPDQNTKKKIFTLHTSKMSLGDDVDLDEFINQKDDLSGADI 414
Query: 243 RNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 278
R +CTEAG+ A+R R V +DF A ++ + K+
Sbjct: 415 RAICTEAGLMALRERRMRVQMDDFRAARERIMKTKQ 450
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 138/280 (49%), Positives = 195/280 (69%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ Y+ +GGL QI+EL E+I LP+ + E F ++GI+P
Sbjct: 144 ILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRP 203
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVLLYGPPGTGKTL+ARA A+ +A FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 204 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKS 263
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQLDGF ++K+I ATNR D+LD
Sbjct: 264 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILD 323
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+R GRLDRKIE P P E++R IL+IH+ + + ++++E + + + FNGA L+ V
Sbjct: 324 PALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAV 383
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R + V HEDF + + ++ +AKK S +Y
Sbjct: 384 CVEAGMLALRRDATEVNHEDFNEGIIQV-QAKKKASLNYY 422
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 130/273 (47%), Positives = 193/273 (70%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ L + DP+V M E +Y+ VGGL QI+E++E++ELPL +PE + +GI+P
Sbjct: 162 VIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRP 221
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGV+LYG PGTGKTLLA+A+A+ A FL++V S +I KY+G+ +++RE+F A ++
Sbjct: 222 PKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENA 281
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD G VK++MATNR + LD
Sbjct: 282 PSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLD 341
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+RPGR+DRKIE PLP+E+++ I +IH + + E++ E + + +GAD++ +
Sbjct: 342 PALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAM 401
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 278
CTEAG+ A+R R V EDF K+ + KK
Sbjct: 402 CTEAGLLALRERRMRVTMEDFQKSKENVLYRKK 434
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 136/280 (48%), Positives = 192/280 (68%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ YS +GGL QI+EL E+I LP+ + E F +GI+P
Sbjct: 106 ILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP 165
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 166 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 225
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D+LD
Sbjct: 226 PSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILD 285
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE P+PNE++R I++IH+ + +++YE + + + FNGA + V
Sbjct: 286 PALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAV 345
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R + HED+M+ + ++ +AKK + +Y
Sbjct: 346 CVEAGMIALRRGATELTHEDYMEGILEV-QAKKKANLQYY 384
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 136/280 (48%), Positives = 192/280 (68%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ YS +GGL QI+EL E+I LP+ + E F +GI+P
Sbjct: 110 ILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP 169
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 170 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 229
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D+LD
Sbjct: 230 PSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILD 289
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE P+PNE++R I++IH+ + +++YE + + + FNGA + V
Sbjct: 290 PALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAV 349
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R + HED+M+ + ++ +AKK + +Y
Sbjct: 350 CVEAGMIALRRGATELTHEDYMEGILEV-QAKKKANLQYY 388
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 136/280 (48%), Positives = 192/280 (68%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ YS +GGL QI+EL E+I LP+ + E F +GI+P
Sbjct: 160 ILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP 219
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 220 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 279
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D+LD
Sbjct: 280 PSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILD 339
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE P+PNE++R I++IH+ + +++YE + + + FNGA + V
Sbjct: 340 PALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAV 399
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R + HED+M+ + ++ +AKK + +Y
Sbjct: 400 CVEAGMIALRRGATELTHEDYMEGILEV-QAKKKANLQYY 438
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 136/280 (48%), Positives = 192/280 (68%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ YS +GGL QI+EL E+I LP+ + E F +GI+P
Sbjct: 118 ILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP 177
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 178 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 237
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D+LD
Sbjct: 238 PSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILD 297
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE P+PNE++R I++IH+ + +++YE + + + FNGA + V
Sbjct: 298 PALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAV 357
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R + HED+M+ + ++ +AKK + +Y
Sbjct: 358 CVEAGMIALRRGATELTHEDYMEGILEV-QAKKKANLQYY 396
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 136/280 (48%), Positives = 192/280 (68%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ YS +GGL QI+EL E+I LP+ + E F +GI+P
Sbjct: 160 ILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP 219
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 220 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 279
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D+LD
Sbjct: 280 PSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILD 339
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE P+PNE++R I++IH+ + +++YE + + + FNGA + V
Sbjct: 340 PALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAV 399
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R + HED+M+ + ++ +AKK + +Y
Sbjct: 400 CVEAGMIALRRGATELTHEDYMEGILEV-QAKKKANLQYY 438
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 136/280 (48%), Positives = 192/280 (68%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ YS +GGL QI+EL E+I LP+ + E F +GI+P
Sbjct: 167 ILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP 226
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 227 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 286
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D+LD
Sbjct: 287 PSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILD 346
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE P+PNE++R I++IH+ + +++YE + + + FNGA + V
Sbjct: 347 PALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAV 406
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R + HED+M+ + ++ +AKK + +Y
Sbjct: 407 CVEAGMIALRRGATELTHEDYMEGILEV-QAKKKANLQYY 445
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 135/280 (48%), Positives = 192/280 (68%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ YS +GGL QI+EL E+I LP+ + E F +GI+P
Sbjct: 125 ILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP 184
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 185 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKA 244
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D+LD
Sbjct: 245 PSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILD 304
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE P+PNE++R I++IH+ + +++YE + + + FNGA + V
Sbjct: 305 PALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAV 364
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAG+ A+R + HED+M+ + ++ +AKK + +Y
Sbjct: 365 CVEAGIIALRRGATELTHEDYMEGILEV-QAKKKANLQYY 403
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 136/280 (48%), Positives = 192/280 (68%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ YS +GGL QI+EL E+I LP+ + E F +GI+P
Sbjct: 163 ILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP 222
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 223 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 282
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D+LD
Sbjct: 283 PSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILD 342
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE P+PNE++R I++IH+ + +++YE + + + FNGA + V
Sbjct: 343 PALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAV 402
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R + HED+M+ + ++ +AKK + +Y
Sbjct: 403 CVEAGMIALRRGATELTHEDYMEGILEV-QAKKKANLQYY 441
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 136/280 (48%), Positives = 192/280 (68%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ YS +GGL QI+EL E+I LP+ + E F +GI+P
Sbjct: 160 ILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP 219
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 220 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 279
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D+LD
Sbjct: 280 PSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILD 339
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE P+PNE++R I++IH+ + +++YE + + + FNGA + V
Sbjct: 340 PALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAV 399
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R + HED+M+ + ++ +AKK + +Y
Sbjct: 400 CVEAGMIALRRGATELTHEDYMEGILEV-QAKKKANLQYY 438
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 136/280 (48%), Positives = 192/280 (68%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ YS +GGL QI+EL E+I LP+ + E F +GI+P
Sbjct: 163 ILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP 222
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 223 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 282
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D+LD
Sbjct: 283 PSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILD 342
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE P+PNE++R I++IH+ + +++YE + + + FNGA + V
Sbjct: 343 PALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAV 402
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R + HED+M+ + ++ +AKK + +Y
Sbjct: 403 CVEAGMIALRRGATELTHEDYMEGILEV-QAKKKANLQYY 441
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 136/280 (48%), Positives = 193/280 (68%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ YS +GGL QI+EL E++ LP+ + E F +GIKP
Sbjct: 142 ILDTLPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKP 201
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVL+YGPPGTGKTLLARA A+ ++ +LK+ ++ +IG+ A+L+R+ F A++
Sbjct: 202 PKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKG 261
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF S DRE+QRT++ELLNQLDGF +K+I ATNR D+LD
Sbjct: 262 PTIIFIDELDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILD 321
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE PLPNE++R IL+IH+ + +++++ + + +E FNGA L+ V
Sbjct: 322 PALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAV 381
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R +IH DF++ ++ AKK ++ +Y
Sbjct: 382 CVEAGMIALRRGGTELIHNDFVEGCVEVM-AKKKKTLEYY 420
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 132/280 (47%), Positives = 193/280 (68%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ YS +GG QI+EL E++ LP+ + + F+ +GI P
Sbjct: 151 ILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHP 210
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVL+YGPPGTGKT++ARA+A+ + FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 211 PKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 270
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +K+I ATNR DVLD
Sbjct: 271 PAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLD 330
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE+P PNE +R I++IH+ + + ++++E + + + FNGA + V
Sbjct: 331 PALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAV 390
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R + ++HEDFM A+ ++ +AKK S +Y
Sbjct: 391 CVEAGMIALRRDATEILHEDFMDAILEV-QAKKKASLNYY 429
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 132/280 (47%), Positives = 193/280 (68%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ YS +GG QI+EL E++ LP+ + + F+ +GI P
Sbjct: 151 ILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHP 210
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVL+YGPPGTGKT++ARA+A+ + FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 211 PKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 270
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +K+I ATNR DVLD
Sbjct: 271 PAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLD 330
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE+P PNE +R I++IH+ + + ++++E + + + FNGA + V
Sbjct: 331 PALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAV 390
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R + ++HEDFM A+ ++ +AKK S +Y
Sbjct: 391 CVEAGMIALRRDATEILHEDFMDAILEV-QAKKKASLNYY 429
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 132/279 (47%), Positives = 195/279 (69%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
T+ ++ L + DP+V M + SY+ +GGL QI+E++ES+ELPL +PEL+ +G
Sbjct: 157 TVAVVGVLQDDADPMVSVMKLDKSPTESYADIGGLESQIQEIKESVELPLTHPELYEEMG 216
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
IKPPKGV+LYG PGTGKTLLA+A+A+ A FL++V S +I KY+G+ RL R++F A
Sbjct: 217 IKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAA 276
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
DH P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G +K+IMATN+ +
Sbjct: 277 DHAPSIVFIDEIDAIGTKRYESTSGGEREIQRTMLELLNQLDGFDDRGDIKVIMATNKIE 336
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADL 242
LDPAL+RPGR+DRKI P+ ++ +IL IH + ++ +++ + +V + +GAD+
Sbjct: 337 SLDPALIRPGRIDRKILFENPDANTKKKILTIHTSKMSLADDVNLDEIVTGKDDLSGADI 396
Query: 243 RNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLES 281
+ +CTEAG+ A+R R V EDF A ++ + K E+
Sbjct: 397 KAICTEAGLLALRERRMQVKAEDFKSAKERVLKNKVEEN 435
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 134/279 (48%), Positives = 196/279 (70%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
T++I+ L + DP+V M + SYS +GGL QI+E++ES+ELPL +PEL+ +G
Sbjct: 153 TMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMG 212
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
IKPPKGV+LYG PGTGKTLLA+A+A+ A FL++V S +I KY+G+ RL R++F A
Sbjct: 213 IKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAG 272
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
++ P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATN+ +
Sbjct: 273 ENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIE 332
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADL 242
LDPAL+RPGR+DRKI P+ ++ +IL IH + + +++ E +V + +GAD+
Sbjct: 333 TLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADI 392
Query: 243 RNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLES 281
+ +CTEAG+ A+R R V EDF +A ++ + K E+
Sbjct: 393 QAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNKVEEN 431
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 139/280 (49%), Positives = 193/280 (68%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ +YS VGGL QI EL E+I LP+ + F +GI+
Sbjct: 155 ILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRA 214
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKG L+YGPPGTGKTLLARA A+ +A FLK+ + ++ YIGE A+L+R+ F A++
Sbjct: 215 PKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKA 274
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF S DRE+QRT++ELLNQLDGF +VK++ ATNR DVLD
Sbjct: 275 PTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLD 334
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE PLP+E SR +IL+IH+ + +I+++ + + + FNGA L+ V
Sbjct: 335 PALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAV 394
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
EAGM A+R + V HEDF++ + ++ +A+K +S + Y
Sbjct: 395 TVEAGMIALRNGQSSVKHEDFVEGISEV-QARKSKSVSFY 433
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 135/280 (48%), Positives = 192/280 (68%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ YS +GGL QI+EL E+I LP+ + E F +GI+P
Sbjct: 148 ILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP 207
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 208 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 267
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D+LD
Sbjct: 268 PSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILD 327
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE P+PNE++R I++IH+ + ++++E + + + FNGA + V
Sbjct: 328 PALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAV 387
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R + HED+M+ + ++ +AKK + +Y
Sbjct: 388 CVEAGMIALRRGATELNHEDYMEGILEV-QAKKKANLQYY 426
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 134/280 (47%), Positives = 191/280 (68%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ YS +GGL QI+EL E+I LP+ + E F +GI+P
Sbjct: 155 ILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP 214
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 215 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 274
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DA G +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D+LD
Sbjct: 275 PSIIFIDELDATGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILD 334
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLD+KIE P+PNE++R I++IH+ + +++YE + + + FNGA + V
Sbjct: 335 PALLRSGRLDQKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCMDDFNGAQCKAV 394
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R + HED+M+ + ++ +AKK + +Y
Sbjct: 395 CVEAGMIALRRGTTELTHEDYMEGILEV-QAKKKANLQYY 433
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 131/273 (47%), Positives = 189/273 (69%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ LP E D + + ++ ++SY +GGL Q +E+RE++ELPL + EL+ ++GI P
Sbjct: 135 LVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDP 194
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
P+GVL+YGPPG GKT+LA+A+A+N A+F++VV S + KY+GE R++R++F A+++
Sbjct: 195 PRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENS 254
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LD
Sbjct: 255 PSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLD 314
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLRPGRLDRKIE PLP+ + + + + + ++D E V + +GAD+ ++
Sbjct: 315 PALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSI 374
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 278
C EAGM A+R R V+ +D KA + N KK
Sbjct: 375 CQEAGMQAVRENRYVVLTKDLEKAYK--NVVKK 405
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 133/272 (48%), Positives = 188/272 (69%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ YS +GGLS QI EL E+I LP+ + F ++G+KP
Sbjct: 159 IIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKP 218
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKG L++GPPGTGKTLLARA A+ +A FLK+ + ++ +IG+ A+L+R+ F A++
Sbjct: 219 PKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKS 278
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D LD
Sbjct: 279 PAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLD 338
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRK+E PLPNE++R+ IL+IH+ +A +I++E + + + +NGA L++V
Sbjct: 339 PALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSV 398
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAK 277
C EAGM A+R + HE FM + ++ K
Sbjct: 399 CVEAGMIALRQGDTKINHEHFMDGILEVQMRK 430
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 131/273 (47%), Positives = 190/273 (69%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ L ++D E ++ +GG QI+EL+ES+ELPL +PE + +GI
Sbjct: 157 IVGVLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITA 216
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGV+LYG PGTGKTLLA+A+A++ A F++ S ++ K GE ARL+R++F A++
Sbjct: 217 PKGVILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQA 276
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P I+F+DEIDA+G +RF + ++E+QRTL+ELLNQLDGF+ G VK+IMATNR D LD
Sbjct: 277 PSIVFIDEIDAVGTKRFDTSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLD 336
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PAL+RPGR+DRKIE+P P+E++R +I IH +G+ + YE V+ + +GA+++ V
Sbjct: 337 PALIRPGRIDRKIELPKPDEKTRQKIFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAV 396
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 278
CTEAGM A+RA+R V +DF KAV+ + +KK
Sbjct: 397 CTEAGMLALRAQRKCVGTDDFEKAVKSVMLSKK 429
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 134/281 (47%), Positives = 190/281 (67%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ LP E D V M ++ YS +GGL QI EL E++ LP+ + F +GIKP
Sbjct: 174 VLDTLPSEYDSRVKAMEVDEKPTEDYSDIGGLDKQIEELIEAVVLPMKQADKFKNLGIKP 233
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKG L+YGPPGTGKTLLARA A+ A FLK+ + ++ +IG+ A+L+R+ F A++
Sbjct: 234 PKGALMYGPPGTGKTLLARACAAQSGATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKA 293
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF S DRE+QRT++ELLNQLDGF +VK++ ATNR D LD
Sbjct: 294 PTIIFIDELDAIGTKRFDSDKSGDREVQRTMLELLNQLDGFGSDDRVKVLAATNRVDTLD 353
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGI-AKHGEIDYEAVVKLAEGFNGADLRN 244
PALLR GRLDRKIE PLP+E++R +LKIHA + + +++ + + + FNGA L+
Sbjct: 354 PALLRSGRLDRKIEFPLPSEEARESVLKIHARKLHCDNNSVNWRELARSTDEFNGAQLKA 413
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
V EAGM A+R + + HEDF++A+ ++ +A+K +S Y
Sbjct: 414 VTVEAGMIALRNGKSIIKHEDFVEAISEV-QARKSKSVNFY 453
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 131/280 (46%), Positives = 190/280 (67%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ LP E D + + ++ +VSY+ +GG+ Q +E+RE++ELPL + EL+ ++GI P
Sbjct: 134 LVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDP 193
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
P+GVL+YGPPG GKT+LA+A+A + A+F++VV S + KY+GE R++R++F A+++
Sbjct: 194 PRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA 253
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LD
Sbjct: 254 PAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLD 313
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLRPGRLDRKIE PLP+ + + + + + ++D E V + +GAD+ +
Sbjct: 314 PALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAI 373
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R R V+ +DF K + N KK E +
Sbjct: 374 CQEAGMHAVRENRYIVLAKDFEKGYK--NNIKKDEQEHEF 411
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 135/281 (48%), Positives = 190/281 (67%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ LP E D ++ + ++ + SYS +GG Q +E+RE++ELPL + L+ ++GI P
Sbjct: 124 LVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDP 183
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
P+GVLLYGPPGTGKT+LA+A+A + A F++VV S + KY+GE RL+R++F AR++
Sbjct: 184 PRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENS 243
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DEIDAI +RF T ADRE+QR LMELLNQ+DGFD VK+IMATNR D LD
Sbjct: 244 PAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLD 303
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLRPGRLDRKIE PLP+ + + I ++ + + E+D E V + +GA+++++
Sbjct: 304 PALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSI 363
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYN 286
C EAGM AIR R ++ +DF K K + K YN
Sbjct: 364 CQEAGMHAIRKNRYVILPKDFEKGY-KASIKKNTHEFNFYN 403
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 128/266 (48%), Positives = 184/266 (69%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ LP E D + + + +VSY+ +GG Q +E+RE++ELPL + EL+ ++GI P
Sbjct: 129 LVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDP 188
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
P+GVLLYGPPGTGKT+LA+A+A++ A F++VV S + KY+GE R++R++F A+++
Sbjct: 189 PRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA 248
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAI RF T ADRE+QR LMELLNQ+DGFDQ VK+IMATNR D LD
Sbjct: 249 PAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLD 308
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLRPGRLDRKIE PLP+ + + + ++ + + E+D E V + + A++ +
Sbjct: 309 PALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAI 368
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVR 271
C EAGM A+R R ++ +DF K R
Sbjct: 369 CQEAGMHAVRKNRYVILPKDFEKGYR 394
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 132/280 (47%), Positives = 189/280 (67%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ +S +GGL QI+EL E++ LP+ + E F +GI P
Sbjct: 153 ILETLPAEYDARVKAMEVDERPTEQFSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHP 212
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGV+LYGPPGTGKTLLARA A+ + FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 213 PKGVILYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 272
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF + DRE+QRT++ELLNQL+GF +K+I ATNR D+L
Sbjct: 273 PAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLNGFSSTADIKVIAATNRVDIL- 331
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE P PNE++R I++IH+ + ++++E + + + FNGA + V
Sbjct: 332 PALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAV 391
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
C EAGM A+R + V HEDFM A+ ++ +AKK + +Y
Sbjct: 392 CVEAGMIALRRSANSVTHEDFMDAIMEV-QAKKKANLNYY 430
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 128/266 (48%), Positives = 184/266 (69%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI P
Sbjct: 138 LVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP 197
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
P+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++
Sbjct: 198 PRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA 257
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LD
Sbjct: 258 PAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLD 317
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLRPGRLDRKIE PLP+ + + I + + E+D E V + +GAD+ ++
Sbjct: 318 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSI 377
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVR 271
C E+GM A+R R V+ +DF KA +
Sbjct: 378 CQESGMLAVRENRYIVLAKDFEKAYK 403
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 128/266 (48%), Positives = 184/266 (69%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI P
Sbjct: 139 LVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP 198
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
P+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++
Sbjct: 199 PRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA 258
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LD
Sbjct: 259 PAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLD 318
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLRPGRLDRKIE PLP+ + + I + + E+D E V + +GAD+ ++
Sbjct: 319 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSI 378
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVR 271
C E+GM A+R R V+ +DF KA +
Sbjct: 379 CQESGMLAVRENRYIVLAKDFEKAYK 404
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 128/266 (48%), Positives = 184/266 (69%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI P
Sbjct: 139 LVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP 198
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
P+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++
Sbjct: 199 PRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA 258
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LD
Sbjct: 259 PAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLD 318
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLRPGRLDRKIE PLP+ + + I + + E+D E V + +GAD+ ++
Sbjct: 319 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSI 378
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVR 271
C E+GM A+R R V+ +DF KA +
Sbjct: 379 CQESGMLAVRENRYIVLAKDFEKAYK 404
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 128/266 (48%), Positives = 184/266 (69%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI P
Sbjct: 139 LVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP 198
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
P+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++
Sbjct: 199 PRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA 258
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LD
Sbjct: 259 PAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLD 318
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLRPGRLDRKIE PLP+ + + I + + E+D E V + +GAD+ ++
Sbjct: 319 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSI 378
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVR 271
C E+GM A+R R V+ +DF KA +
Sbjct: 379 CQESGMLAVRENRYIVLAKDFEKAYK 404
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 128/266 (48%), Positives = 184/266 (69%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI P
Sbjct: 139 LVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP 198
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
P+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++
Sbjct: 199 PRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA 258
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LD
Sbjct: 259 PAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLD 318
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLRPGRLDRKIE PLP+ + + I + + E+D E V + +GAD+ ++
Sbjct: 319 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSI 378
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVR 271
C E+GM A+R R V+ +DF KA +
Sbjct: 379 CQESGMLAVRENRYIVLAKDFEKAYK 404
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 128/266 (48%), Positives = 184/266 (69%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI P
Sbjct: 139 LVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP 198
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
P+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++
Sbjct: 199 PRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA 258
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LD
Sbjct: 259 PAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLD 318
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLRPGRLDRKIE PLP+ + + I + + E+D E V + +GAD+ ++
Sbjct: 319 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSI 378
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVR 271
C E+GM A+R R V+ +DF KA +
Sbjct: 379 CQESGMLAVRENRYIVLAKDFEKAYK 404
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 128/266 (48%), Positives = 184/266 (69%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI P
Sbjct: 139 LVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP 198
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
P+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++
Sbjct: 199 PRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA 258
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LD
Sbjct: 259 PAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLD 318
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLRPGRLDRKIE PLP+ + + I + + E+D E V + +GAD+ ++
Sbjct: 319 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSI 378
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVR 271
C E+GM A+R R V+ +DF KA +
Sbjct: 379 CQESGMLAVRENRYIVLAKDFEKAYK 404
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 127/275 (46%), Positives = 195/275 (70%)
Query: 4 LTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGI 63
++I+ L + DP++ M + SY+ +GGL QI+E++E++ELPL +PEL+ +GI
Sbjct: 163 MSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGI 222
Query: 64 KPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARD 123
KPPKGV+LYG PGTGKTLLA+A+A+ A FL+VV S +I KY+G+ RL+R++F A +
Sbjct: 223 KPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEE 282
Query: 124 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGK-VKMIMATNRPD 182
H P I+F+DEIDAIG +R+ + A+REIQRT++ELLNQLDGFD + +K+IMATNR
Sbjct: 283 HSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRIS 342
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADL 242
LDPAL+RPGR+DRKI P+E ++ +I IH + + +++ E +++ + +GA++
Sbjct: 343 DLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEI 402
Query: 243 RNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAK 277
+ + +EAG+ A+R R V+ +DF +A K+ + K
Sbjct: 403 KAIVSEAGLLALRERRMRVVMDDFRQAREKVLKTK 437
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 129/277 (46%), Positives = 187/277 (67%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ Y+ +GGL QI E+ E+I P+ E F ++GIK
Sbjct: 185 ILDTLPAEYDNRVKAMEVDEKPTEKYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKA 244
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKG L+YGPPGTGKTLLARA A+ +A FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 245 PKGALMYGPPGTGKTLLARACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKA 304
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DA+G +RF S DRE+QRT++ELLNQLDGF ++K++ ATNR DVLD
Sbjct: 305 PSIIFIDELDAVGTKRFDSEKSGDREVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLD 364
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE PLPNE++R IL+IH+ + +++ + + + F GA L+ V
Sbjct: 365 PALLRSGRLDRKIEFPLPNEEARANILQIHSRKMTVEDSVNWAELARSTDEFGGAQLKAV 424
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESS 282
C EAGM A+R + HE+++ A+ ++ +AKK +++
Sbjct: 425 CVEAGMIALRKGHSKIGHENYVDAIAEV-QAKKKDTN 460
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 128/266 (48%), Positives = 183/266 (68%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
++ LP E D + + + +V YS +GG+ Q +E+RE++ELPL + EL+ ++GI P
Sbjct: 139 LVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDP 198
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
P+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++
Sbjct: 199 PRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA 258
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LD
Sbjct: 259 PAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLD 318
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALL PGRLDRKIE PLP+ + + + + + E+D E V + +GAD+ ++
Sbjct: 319 PALLCPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSI 378
Query: 246 CTEAGMSAIRAERDYVIHEDFMKAVR 271
C EAGM A+R R V+ +DF KA +
Sbjct: 379 CQEAGMLAVRENRYIVLAKDFEKAYK 404
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 128/273 (46%), Positives = 192/273 (70%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
+P E D + + ++ ++SYS +GGL Q +E+RE++ELPL + +L+ ++GI PP+GV
Sbjct: 130 VPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGV 189
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPG GKT+LA+A+A + A+F++VV S + KY+GE R++R++F A+ + P II
Sbjct: 190 LLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSII 249
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFD+ +K+IMATNR D LDPALL
Sbjct: 250 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALL 309
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
RPGRLDRKIE+PLP+ + + + + + ++D E ++ + + AD+ +C EA
Sbjct: 310 RPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEA 369
Query: 250 GMSAIRAERDYVIH-EDFMK----AVRKLNEAK 277
GM A+R R YV++ +DF K +VRK +EA+
Sbjct: 370 GMHAVRENR-YVVNAKDFEKGYKTSVRK-DEAQ 400
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 136/296 (45%), Positives = 193/296 (65%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRES----------------IE 49
I+ LP E D V M ++ YS +GGL QI+E+RE+ I
Sbjct: 161 ILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQEVREARHLTSLLCLSASLVEAIV 220
Query: 50 LPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGE 109
LP+ + E F +GI+PPKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+
Sbjct: 221 LPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 280
Query: 110 SARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQL 169
A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF
Sbjct: 281 GAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN 340
Query: 170 GKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEA 229
+VK+I ATNR D+LDPALLR GRLDRKIE P+PNE++R I++IH+ + +++YE
Sbjct: 341 TQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEE 400
Query: 230 VVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
+ + + FNGA + VC EAGM A+R + HED+M+ + ++ +AKK + +Y
Sbjct: 401 LARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEV-QAKKKANLQYY 455
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 128/282 (45%), Positives = 185/282 (65%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
+I+ LP E D + + + NV Y+ +GGL Q +E++E++ELPL PEL+ ++GI+
Sbjct: 111 SIVNILPSESDSSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIE 170
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PP G+L+YGPPGTGKT+L +A+A+ F+ VV S + KY+GE R++R++F AR++
Sbjct: 171 PPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLAREN 230
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIF+DE+DAI +RF T ADRE+QR L+ELLNQ+DGFD+ VK+IMATNR D L
Sbjct: 231 SPSIIFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTL 290
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
DPALLRPGRLDRKIE PLP+ + + I + + + +++ E+ V + + AD+
Sbjct: 291 DPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAA 350
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYN 286
+ EAGM AIR R + DF + R + K+L YN
Sbjct: 351 IAQEAGMQAIRKNRYIITANDFEQGYRT-HVRKQLRDYEFYN 391
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 128/282 (45%), Positives = 185/282 (65%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
+I+ LP E D + + + NV Y+ +GGL Q +E++E++ELPL PEL+ ++GI+
Sbjct: 111 SIVNILPSESDSSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIE 170
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PP G+L+YGPPGTGKT+L +A+A+ F+ VV S + KY+GE R++R++F AR++
Sbjct: 171 PPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLAREN 230
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIF+DE+DAI +RF T ADRE+QR L+ELLNQ+DGFD+ VK+IMATNR D L
Sbjct: 231 SPSIIFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTL 290
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
DPALLRPGRLDRKIE PLP+ + + I + + + +++ E+ V + + AD+
Sbjct: 291 DPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAA 350
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYN 286
+ EAGM AIR R + DF + R + K+L YN
Sbjct: 351 IAQEAGMQAIRKNRYIITANDFEQGYRT-HVRKQLRDYEFYN 391
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 126/277 (45%), Positives = 183/277 (66%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP E D + + ++ +VSY+ VGGL Q +E+RE++ELPL +L+ ++GI PP+GV
Sbjct: 112 LPPEADSSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGV 171
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LLYGPPGTGKT+L +A+A++ ANF++VV S + KY+GE R++R++F AR++ P II
Sbjct: 172 LLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAII 231
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F+DEIDAI +RF T ADRE+QR L+ELL Q+DGFDQ VK+IMATNR D LDPALL
Sbjct: 232 FIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALL 291
Query: 190 RPGRLDRKIEIP-LPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTE 248
RPGRLDRKIE P + + R + + A + E+D + + + +GA + + +
Sbjct: 292 RPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQD 351
Query: 249 AGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 285
AG+ A+R R ++ D +A + + +E A Y
Sbjct: 352 AGLLAVRKSRGVILQSDIEEAYARAVKPTDMEQFAFY 388
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 130/276 (47%), Positives = 187/276 (67%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP E D + + + +V+Y+ VGGL Q +E+RE++ELPL + +L+ ++GI PP+GV
Sbjct: 144 LPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGV 203
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LLYGPPGTGKT+L +A+A++ A+F++V S + KY+GE R++R++F AR++ P II
Sbjct: 204 LLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAII 263
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F+DEIDAI +RF T ADRE+QR L+ELLNQ+DGF+Q VK+IMATNR D LDPALL
Sbjct: 264 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFEQTSNVKVIMATNRADTLDPALL 323
Query: 190 RPGRLDRKIEIP-LPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTE 248
RPGRLDRKIE P L + + R I A+ ++ E+D ++++ E +GA + + E
Sbjct: 324 RPGRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQE 383
Query: 249 AGMSAIRAERDYVIHEDFMKA----VRKLNEAKKLE 280
AG+ A+R R +I D A V+ EA +LE
Sbjct: 384 AGLRAVRKNRYNIIQSDLEDAYSAQVKTGQEADRLE 419
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 122/261 (46%), Positives = 179/261 (68%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP E D + + + +V+Y+ VGGL Q +E++E++ELPL +L+ ++GI PP+GV
Sbjct: 133 LPPEADSSISIVGEDQKPDVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGV 192
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LLYGPPGTGKT+L +A+A++ A+F+++ S + KY+GE R++R++F AR++ P II
Sbjct: 193 LLYGPPGTGKTMLVKAVANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAII 252
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LDPALL
Sbjct: 253 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALL 312
Query: 190 RPGRLDRKIEIP-LPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTE 248
RPGRLDRKIE P L + + R I A+ ++ E D ++++ + +GA + + E
Sbjct: 313 RPGRLDRKIEFPSLKDRRERRLIFSTIASKMSLAPEADLDSLIIRNDPLSGAVIAAIMQE 372
Query: 249 AGMSAIRAERDYVIHEDFMKA 269
AG+ A+R R ++ D +A
Sbjct: 373 AGLRAVRKNRYMILQSDLEEA 393
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 122/261 (46%), Positives = 179/261 (68%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP E D + + + +V+Y+ VGGL Q +E++E++ELPL +L+ ++GI PP+GV
Sbjct: 133 LPPEADSSISIVGEDQKPDVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGV 192
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LLYGPPGTGKT+L +A+A++ A+F+++ S + KY+GE R++R++F AR++ P II
Sbjct: 193 LLYGPPGTGKTMLVKAVANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAII 252
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LDPALL
Sbjct: 253 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALL 312
Query: 190 RPGRLDRKIEIP-LPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTE 248
RPGRLDRKIE P L + + R I A+ ++ E D ++++ + +GA + + E
Sbjct: 313 RPGRLDRKIEFPSLKDRRERRLIFSTIASKMSLAPEADLDSLIIRNDPLSGAVIAAIMQE 372
Query: 249 AGMSAIRAERDYVIHEDFMKA 269
AG+ A+R R ++ D +A
Sbjct: 373 AGLRAVRKNRYMILQSDLEEA 393
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 122/250 (48%), Positives = 168/250 (67%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
I+ LP E D V M ++ YS +GGL QI+EL E+I LP+ + E F +GI+P
Sbjct: 144 ILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP 203
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+ A+L+R+ F A++
Sbjct: 204 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 263
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D+LD
Sbjct: 264 PSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILD 323
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV 245
PALLR GRLDRKIE P+PNE++R I++IH+ + +++YE + + +
Sbjct: 324 PALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCPTISMALSAKQF 383
Query: 246 CTEAGMSAIR 255
EAGM A+R
Sbjct: 384 GVEAGMIALR 393
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 120/261 (45%), Positives = 178/261 (68%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP + D + M + +V+Y+ VGGL Q +E+RE++ELPL+ +L+ ++GI PP+GV
Sbjct: 150 LPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGV 209
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LLYGPPGTGKT+L +A+A++ A F++V S + KY+GE R++R++F AR++ P II
Sbjct: 210 LLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSII 269
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F+DE+D+I +RF T +DRE+QR L+ELL Q+DGFDQ VK+IMATNR D LDPALL
Sbjct: 270 FIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALL 329
Query: 190 RPGRLDRKIEIP-LPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTE 248
RPGRLDRKIE P L + + R I A+ ++ E D ++++ + +GA + + E
Sbjct: 330 RPGRLDRKIEFPSLRDRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQE 389
Query: 249 AGMSAIRAERDYVIHEDFMKA 269
AG+ A+R R ++ D +A
Sbjct: 390 AGLRAVRKNRYVILQSDLEEA 410
>UNIPROTKB|H0YJS8 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000555339 Uniprot:H0YJS8
Length = 195
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 115/133 (86%), Positives = 122/133 (91%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 63 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQR 122
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 123 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 182
Query: 121 ARDHQPCIIFMDE 133
ARDHQPCIIFMDE
Sbjct: 183 ARDHQPCIIFMDE 195
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 120/275 (43%), Positives = 178/275 (64%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
T++ LP E + + + + NV Y+ +G + Q +E+ E++ELPL + EL+ ++GI
Sbjct: 87 TLVNVLPPEAESSIMMLTSDQKPNVIYADIGSMDIQKQEVWEAMELPLTHFELYKQIGID 146
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PP+GVL+YGPPG GKT+LA+ +A ++ A F+ VV S + KY+GE R+I ++F +++
Sbjct: 147 PPRGVLMYGPPGCGKTMLAKTVAHHMIAAFIHVVGSEFVHKYLGEGPRIIWDVFHLDKEN 206
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK IMATNR D L
Sbjct: 207 APAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNISVKAIMATNRKDTL 266
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRN 244
DP LLRPG LD KIE PLP+ + R+ I + + E++ E V + +GAD+ +
Sbjct: 267 DPTLLRPGHLDHKIEFPLPDHRKRL-IFSTITSKMNLSEEVNVEDYVACPDKISGADINS 325
Query: 245 VCTEAGMSAIRAERDYVIHEDFMKA----VRKLNE 275
+C E+GM + + +DF KA ++K+N+
Sbjct: 326 ICQESGMLTVCENCHIFLAKDFKKAYKTVIKKVNK 360
>UNIPROTKB|J9NWB0 [details] [associations]
symbol:J9NWB0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074818 EMBL:AAEX03014432
Ensembl:ENSCAFT00000039483 OMA:AGSELIQ Uniprot:J9NWB0
Length = 436
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 117/260 (45%), Positives = 172/260 (66%)
Query: 13 EVDPVVYNMLHEDPGNV---SYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
+ DP+V M E +Y+ + GL +QI+E++ES+ELPL +PE + +GIKPPKGV
Sbjct: 166 DTDPLVTVMKVEKVEKAPQETYADIRGLDNQIQEIKESLELPLTHPENYEEMGIKPPKGV 225
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
+LYGPPGT K A+A+ A FL+V S +I KY+G+ +++RE F A +H P I+
Sbjct: 226 ILYGPPGTVK-----AVANRTSATFLRVAGSELIQKYLGDGPKVVRESFRVAEEHAPSIV 280
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F+DEIDAIG RR+ + +REIQRT++ELLNQLDGFD G VK+IMATNR LDPAL
Sbjct: 281 FIDEIDAIGTRRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIKTLDPALS 340
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 249
L ++ PLP+E+++ I +IH + + ++ + ++ + +GAD++ +CTEA
Sbjct: 341 HQAALTGRLS-PLPDEKTKKHIFQIHTSRMTLADDVTLDLIMA-KDDLSGADIKAICTEA 398
Query: 250 GMSAIRAERDYVIHEDFMKA 269
G+ A+R R V +EDF K+
Sbjct: 399 GLMALREHRMKVTNEDFKKS 418
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 536 (193.7 bits), Expect = 2.5e-51, P = 2.5e-51
Identities = 111/270 (41%), Positives = 173/270 (64%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
+ AL R + +L E P NV +S +GG S+ ++++IE PL++ + F R+GIKP
Sbjct: 510 LQAALTRIKPSAMREVLIECP-NVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKP 568
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
P+G+L++GPPG KT++A+A+A+ NFL + + ++GES R +RE+F AR
Sbjct: 569 PRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVA 628
Query: 126 PCIIFMDEIDAIGGRRFS-EGTSADREI-QRTLMELLNQLDGFDQLGKVKMIMATNRPDV 183
P I+F DEIDAIGG R +G+S+ + +R L +LL +LDG + L V ++ ATNRPD+
Sbjct: 629 PAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDM 688
Query: 184 LDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLR 243
+D ALLRPGR+DR + + LP ++R EILKI + ++D E +V+L EG++GA+++
Sbjct: 689 IDKALLRPGRIDRILYVGLPQCEARREILKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQ 748
Query: 244 NVCTEAGMSAIRA--ERDYVIHEDFMKAVR 271
VC EA + A+ E + V DF A++
Sbjct: 749 AVCHEAALRALEQSFEAEDVKWTDFEHALK 778
Score = 237 (88.5 bits), Expect = 8.1e-19, P = 8.1e-19
Identities = 61/231 (26%), Positives = 121/231 (52%)
Query: 34 VGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNID-- 91
+GGL Q++ + ES+E L L G++ +G+LLYG G GK+++ A+ + +
Sbjct: 274 IGGLDRQLQLVEESMEYALGFRTL--PAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEER 331
Query: 92 ----ANFLKVVSSAIIDKYIGESARLIREMFGYARDH--QPCIIFMDEIDAIGGRRFSEG 145
+++ S + K++GE+ + + +F A +H P ++ ++++ + ++ E
Sbjct: 332 SQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQ--EN 389
Query: 146 TSADREIQRTLMELLNQLDGFDQL-GKVKMIMATNRP-DVLDPALLRPGRLDRKIEIPLP 203
+ + + + LL+QL QL G ++AT+ D L P++ R GRLD ++E+ P
Sbjct: 390 SDLVKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVELGAP 449
Query: 204 NEQSRMEILKIHAAGIAKH-GEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 253
+ Q+R+EI++ + + + E V + G+ GADL N+ A + A
Sbjct: 450 SSQARLEIVRCLIKSVEHQLSDEEVEHVASITHGYVGADLANLVYAAMLQA 500
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 537 (194.1 bits), Expect = 2.7e-51, P = 2.7e-51
Identities = 113/264 (42%), Positives = 165/264 (62%)
Query: 22 LHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTL 81
L E+ NVS+ +GGL D ELR++IE P + E F + G+ PPKG++LYGPPG KT
Sbjct: 560 LVENISNVSWDDIGGLDDIKEELRQAIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTT 619
Query: 82 LARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRR 141
L +A+AS+ +FL + + I Y+G+S + IR++F AR P I+F DEIDAI +R
Sbjct: 620 LVKAVASSSKLSFLSLSGATIFSPYLGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKR 679
Query: 142 -FSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 200
S+ +S D R L LN++DG +QL V +I ATNR D++D ALLRPGR D+ +EI
Sbjct: 680 NLSDNSSGDNAQSRVLSTFLNEMDGVEQLNGVIVIGATNRLDMIDNALLRPGRFDKILEI 739
Query: 201 PLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAE--R 258
LP++ SR++ILKI I ++ + L GF+GADL N+C EA ++R +
Sbjct: 740 KLPDQLSRLKILKIKTKSIPLSDNVNLIEISNLTNGFSGADLENLCREASFQSLRRDLLN 799
Query: 259 DYVIHEDFMKAVRKLN-EAKKLES 281
+V DF+ + K+N ++K LE+
Sbjct: 800 GFVEMYDFLNCLSKINNQSKNLEN 823
Score = 376 (137.4 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 86/229 (37%), Positives = 135/229 (58%)
Query: 34 VGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDAN 93
+GGL++QI+ L E + P++ P++F + I PPKG+LL GPPGTGKT L R + D
Sbjct: 289 IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDIE 348
Query: 94 FLKVVSSAIIDKYIGESARLIREMFGYARD------HQPCIIFMDEIDAIGGRRFSEGTS 147
+ + + I YIGE+ +R +F A D + P ++F+DEID I R S+ T
Sbjct: 349 MISIDCAKISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPR-SKSTQ 407
Query: 148 ADREIQRTLMELLNQLDGFD-QLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 206
+ R + + L LDG + G + +I ATNRP+ +D AL RPGRLDR+IEIP+PN+Q
Sbjct: 408 NE---SRVVGQFLTLLDGIGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQ 464
Query: 207 SRMEILKIHAAG--IAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 253
R++ILK++ + I+ + + G+ GA+++ +C ++ A
Sbjct: 465 QRLDILKLYCSKLPISPTPSNLLDQIADETVGYVGANIQFLCRDSAFIA 513
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 526 (190.2 bits), Expect = 3.8e-50, P = 3.8e-50
Identities = 107/233 (45%), Positives = 153/233 (65%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V++ +GGL D REL+E ++ P+ +P+ FL+ G+ P KGVL YGPPG GKTLLA+AIA+
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAI----GGRRFSE 144
ANF+ + ++ + GES +RE+F AR PC++F DE+D+I GG
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 145 GTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 204
G +ADR I ++L ++DG V +I ATNRPD++DPA+LRPGRLD+ I IPLP+
Sbjct: 594 GGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649
Query: 205 EQSRMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
E+SR+ ILK + + +AK G++D E + K+ GF+GADL +C A AIR
Sbjct: 650 EKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 702
Score = 510 (184.6 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 106/253 (41%), Positives = 154/253 (60%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E +P+ E V Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A + P IIF+D
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 304
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
E+DAI +R E T + E +R + +LL +DG Q V ++ ATNRP+ +DPAL R G
Sbjct: 305 ELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+++I +P+ R+EIL+IH + ++D E V G GADL +C+EA +
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 421
Query: 253 AIRAERDYVIHED 265
AIR + D + ED
Sbjct: 422 AIRKKMDLIDLED 434
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 523 (189.2 bits), Expect = 8.9e-50, P = 8.9e-50
Identities = 107/255 (41%), Positives = 160/255 (62%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
NVS+ +GGL + REL+E+++ P+ +PE F + G+ P KGVL YGPPG GKTLLA+AIA
Sbjct: 477 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ ANF+ + ++ + GES +RE+F AR PC++F DE+D+I +R +
Sbjct: 537 NECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGD 596
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
A R L +LL ++DG + V +I ATNRPD++DPALLRPGRLD+ I IPLP+E+S
Sbjct: 597 AGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 656
Query: 208 RMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHED 265
R +I K + + +AK ++D A+ K +GF+GAD+ +C + AIR I +D
Sbjct: 657 RYQIFKSCLRKSPVAK--DVDLRALAKYTQGFSGADITEICQRSCKYAIREN----IEKD 710
Query: 266 FMKAVRKLNEAKKLE 280
K ++ + +E
Sbjct: 711 IEKERKRAESPEAME 725
Score = 506 (183.2 bits), Expect = 6.9e-48, P = 6.9e-48
Identities = 105/237 (44%), Positives = 152/237 (64%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V Y VGG+ Q+ ++RE +ELPL +P+LF +G+KPPKG+LLYGPPG+GKTL+ARA+A+
Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 148
A F + I+ K GES +R+ F A + P IIF+DEID+I +R E T
Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
Query: 149 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 208
+ E +R + +LL +DG V ++ ATNRP+ +DPAL R GR DR+I+I +P+E R
Sbjct: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 381
Query: 209 MEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHED 265
+E+L+IH + ++D E V K G+ GADL +CTEA + IR + D + +D
Sbjct: 382 LEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDD 438
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 519 (187.8 bits), Expect = 2.3e-49, P = 2.3e-49
Identities = 111/270 (41%), Positives = 167/270 (61%)
Query: 24 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 83
E P NV +S +GG + ++L+ES+E PL + E F R+G++PPKGVLLYGPPG KT+ A
Sbjct: 541 ESP-NVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITA 599
Query: 84 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 143
+AIA+ NF+ V + DK++GES R +R++F AR P +IF DEIDA+ R
Sbjct: 600 KAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANR-G 658
Query: 144 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 203
E S+DR + LLN+LDG + L V ++ ATNRPD++DPAL+RPGRLDR + + P
Sbjct: 659 EDNSSDRVVAA----LLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPP 714
Query: 204 NEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRA--ERDYV 261
N ++R +I+KI A + ++D + + + EG +GA++ +C EAG+ A+ E +
Sbjct: 715 NFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDLEAKEI 774
Query: 262 IHEDFMKAVRKLNEAKKLESSAHYNADFGK 291
F A+ L +A + +Y A F +
Sbjct: 775 CQAHFKTALLALRKAITRDMLEYY-ASFSE 803
Score = 499 (180.7 bits), Expect = 3.9e-47, P = 3.9e-47
Identities = 99/231 (42%), Positives = 150/231 (64%)
Query: 26 PGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARA 85
P V++S++GGL QI ++R+ +ELP NPELF I PP+GVLLYGPPGTGKT++ RA
Sbjct: 273 PSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRA 332
Query: 86 IASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEG 145
+A+ +A + +++ KY+GE+ +R++F AR HQP IIF+DEIDA+ +R +
Sbjct: 333 VAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDV 392
Query: 146 TSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNE 205
+ A+ R + LL LDG GKV +I ATNRP+ +D AL RPGRL+++IEI +P++
Sbjct: 393 SEAE---SRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDK 449
Query: 206 QSRMEILKIHAAGIAKH-GEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
+R++I+K+ +G+ + E + + GADL V EA + AI+
Sbjct: 450 SARLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIK 500
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 518 (187.4 bits), Expect = 3.0e-49, P = 3.0e-49
Identities = 106/236 (44%), Positives = 152/236 (64%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
NVS+ +GGL + REL+E+++ P+ +PE F + G+ P KGVL YGPPG GKTLLA+AIA
Sbjct: 476 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 535
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ ANF+ V ++ + GES +RE+F AR PC++F DE+D+I +R +
Sbjct: 536 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGD 595
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
A R L +LL ++DG + V +I ATNRPD++D ALLRPGRLD+ I IPLP+E S
Sbjct: 596 AGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDS 655
Query: 208 RMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRA--ERD 259
R+ I K + + +AK ++D A+ K +GF+GAD+ +C A AIR E+D
Sbjct: 656 RLNIFKACLRKSPVAK--DVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKD 709
Score = 513 (185.6 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 110/262 (41%), Positives = 161/262 (61%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V Y VGG+ Q+ ++RE +ELPL +P+LF +G+KPPKG+LLYGPPG+GKTL+ARA+A+
Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 148
A F + I+ K GES +R+ F A + P IIF+DEID+I +R E T+
Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTNG 321
Query: 149 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 208
+ E +R + +LL +DG V ++ ATNRP+ +DPAL R GR DR+I+I +P+E R
Sbjct: 322 EVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 380
Query: 209 MEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMK 268
+E+L+IH + ++D E + K G+ GADL +CTEA + IR + D + ED
Sbjct: 381 LEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSI 440
Query: 269 AVRKLNEAKKLESSAHYNADFG 290
LN S+ H++ G
Sbjct: 441 DAEILNSMAV--SNEHFHTALG 460
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 109/253 (43%), Positives = 153/253 (60%)
Query: 21 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 80
ML E G V++ V G+ + EL E +E L NP+ F R+G K PKG LL GPPGTGKT
Sbjct: 145 MLTEKHGRVTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGPPGTGKT 203
Query: 81 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 140
LLARAIA F + S ++ ++G A +R+MF A+ + PCI+F+DEIDA+G
Sbjct: 204 LLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRH 263
Query: 141 RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 200
R + + E ++TL +LL ++DGF+ V ++ ATNR DVLDPALLRPGR DR + +
Sbjct: 264 RGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTV 323
Query: 201 PLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 260
P+ + R +IL +HA ++D + + GF+GADL N+ EA + A R R +
Sbjct: 324 GNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRF 383
Query: 261 VIHEDFMKAVRKL 273
V EDF A K+
Sbjct: 384 VTMEDFENAKDKV 396
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 109/253 (43%), Positives = 153/253 (60%)
Query: 21 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 80
ML E G V++ V G+ + EL E +E L NP+ F R+G K PKG LL GPPGTGKT
Sbjct: 145 MLTEKHGRVTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGPPGTGKT 203
Query: 81 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 140
LLARAIA F + S ++ ++G A +R+MF A+ + PCI+F+DEIDA+G
Sbjct: 204 LLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRH 263
Query: 141 RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 200
R + + E ++TL +LL ++DGF+ V ++ ATNR DVLDPALLRPGR DR + +
Sbjct: 264 RGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTV 323
Query: 201 PLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 260
P+ + R +IL +HA ++D + + GF+GADL N+ EA + A R R +
Sbjct: 324 GNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRF 383
Query: 261 VIHEDFMKAVRKL 273
V EDF A K+
Sbjct: 384 VTMEDFENAKDKV 396
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 516 (186.7 bits), Expect = 5.0e-49, P = 5.0e-49
Identities = 110/256 (42%), Positives = 158/256 (61%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
NVS++ +GGL + REL+E+++ P+ +PE F + G+ P KGVL YGPPG GKTLLA+AIA
Sbjct: 476 NVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 535
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS-EGT 146
+ ANF+ V ++ + GES +RE+F AR PC++F DE+D+I +R G
Sbjct: 536 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGG 595
Query: 147 SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 206
R L +LL ++DG + V +I ATNRPD++D ALLRPGRLD+ I IPLP+E
Sbjct: 596 DGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDED 655
Query: 207 SRMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHE 264
SR+ I K + + IAK ++D A+ K +GF+GAD+ +C A AIR I +
Sbjct: 656 SRLNIFKAALRKSPIAK--DVDIGALAKYTQGFSGADITEICQRACKYAIREN----IEK 709
Query: 265 DFMKAVRKLNEAKKLE 280
D K R+ + +E
Sbjct: 710 DIEKEKRRSENPEAME 725
Score = 511 (184.9 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 105/238 (44%), Positives = 154/238 (64%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
+V Y VGG+ Q+ ++RE +ELPL +P+LF +G+KPPKG+LLYGPPG+GKTL+ARA+A
Sbjct: 203 DVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 262
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ A F + I+ K GES +R+ F A + P IIF+DEID+I +R E T+
Sbjct: 263 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTN 320
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
+ E +R + +LL +DG V ++ ATNRP+ +DPAL R GR DR+I+I +P+E
Sbjct: 321 GEVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIG 379
Query: 208 RMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHED 265
R+E+L+IH + ++D E + K G+ GADL +CTEA + IR + D + ED
Sbjct: 380 RLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 437
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 518 (187.4 bits), Expect = 5.4e-49, P = 5.4e-49
Identities = 106/272 (38%), Positives = 167/272 (61%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
+T ++A+ ++ P + D NVS+S +GGL +L +++E PL +PE F+R
Sbjct: 597 ITLKDFLQAM-NDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIR 655
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
+GI+PPKGVLLYGPPG KT++A+A+A+ NFL + +++KY+GES R +RE F
Sbjct: 656 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 715
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
AR P IIF DE+DA+ R S A R L +LL ++DG +QL V ++ ATNR
Sbjct: 716 ARAVAPSIIFFDELDALAVERGSS-LGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 774
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGA 240
PD +D AL+RPGR+DR I +PLP+ +R EI K+ + E+D + ++ + ++GA
Sbjct: 775 PDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGA 834
Query: 241 DLRNVCTEAGMSAIRAE--RDYVIHEDFMKAV 270
++ VC EA + A+ + + ++ F +A+
Sbjct: 835 EIVAVCREAALLALEEDIQANLIMKRHFTQAL 866
Score = 465 (168.7 bits), Expect = 3.1e-43, P = 3.1e-43
Identities = 104/233 (44%), Positives = 149/233 (63%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V+Y +GGLS Q++ +RE IELPL PELF GI P+GVLLYGPPGTGKT++ARA+A+
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVAN 409
Query: 89 NIDANFLKVVSSA-IIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ A ++ V++ II K+ GE+ +R++F A P IIF+DE+DA+ +R EG
Sbjct: 410 EVGA-YVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 466
Query: 148 ADREIQRTLMELLNQLDGFDQL---GKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 204
+ E +R + LL +DG G+V ++ ATNRP LD AL RPGR D++IEI +PN
Sbjct: 467 NEVE-KRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPN 525
Query: 205 EQSRMEILKIHAAGIAKH--GEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
Q R++IL+ + H E + + A G+ GADL+ +C EAG+ A+R
Sbjct: 526 AQDRLDILQKLLRRVP-HLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALR 577
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 516 (186.7 bits), Expect = 5.8e-49, P = 5.8e-49
Identities = 102/237 (43%), Positives = 153/237 (64%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V Y +GG Q+ ++RE +ELPL +P+LF +GIKPPKG+L+YGPPGTGKT++ARA+A+
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 148
A F + I+ K GES +R+ F A + P IIF+DEID+I +R + T+
Sbjct: 272 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR--DKTNG 329
Query: 149 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 208
+ E +R + +LL +DG V +I ATNRP+ +DPAL R GR DR+++I +P+ + R
Sbjct: 330 EVE-RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGR 388
Query: 209 MEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHED 265
+EIL+IH + ++D EA+ GF GAD+ ++C+EA M IR + D + E+
Sbjct: 389 LEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEE 445
Score = 476 (172.6 bits), Expect = 1.4e-44, P = 1.4e-44
Identities = 92/228 (40%), Positives = 142/228 (62%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
NV++ +GGL + EL+E++E P+++P+ + + G+ P KGVL +GPPGTGKTLLA+A+A
Sbjct: 484 NVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVA 543
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ + ANF+ V ++ + GES IR++F AR P ++F+DE+D+I R
Sbjct: 544 TEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGD 603
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
A R + +LL ++DG + V +I ATNRPD +DPALLRPGRLD+ I +PLP+E +
Sbjct: 604 AGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPA 663
Query: 208 RMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
R+ IL+ +D + K+ GF+GADL + + AI+
Sbjct: 664 RLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIK 711
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 516 (186.7 bits), Expect = 5.8e-49, P = 5.8e-49
Identities = 102/237 (43%), Positives = 153/237 (64%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V Y +GG Q+ ++RE +ELPL +P+LF +GIKPPKG+L+YGPPGTGKT++ARA+A+
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 148
A F + I+ K GES +R+ F A + P IIF+DEID+I +R + T+
Sbjct: 272 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR--DKTNG 329
Query: 149 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 208
+ E +R + +LL +DG V +I ATNRP+ +DPAL R GR DR+++I +P+ + R
Sbjct: 330 EVE-RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGR 388
Query: 209 MEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHED 265
+EIL+IH + ++D EA+ GF GAD+ ++C+EA M IR + D + E+
Sbjct: 389 LEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEE 445
Score = 476 (172.6 bits), Expect = 1.4e-44, P = 1.4e-44
Identities = 92/228 (40%), Positives = 142/228 (62%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
NV++ +GGL + EL+E++E P+++P+ + + G+ P KGVL +GPPGTGKTLLA+A+A
Sbjct: 484 NVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVA 543
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ + ANF+ V ++ + GES IR++F AR P ++F+DE+D+I R
Sbjct: 544 TEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGD 603
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
A R + +LL ++DG + V +I ATNRPD +DPALLRPGRLD+ I +PLP+E +
Sbjct: 604 AGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPA 663
Query: 208 RMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
R+ IL+ +D + K+ GF+GADL + + AI+
Sbjct: 664 RLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIK 711
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 106/253 (41%), Positives = 155/253 (61%)
Query: 21 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 80
+L E G V++ V G+ + EL E I+ L +P+ F ++G + PKGVLL GPPGTGKT
Sbjct: 142 LLTEAQGRVTFEDVAGVDEAKEELEEIIQF-LKDPKKFTKLGGRIPKGVLLVGPPGTGKT 200
Query: 81 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 140
LLARA+A F + S ++ ++G A +R++F + + PCIIF+DEIDA+G
Sbjct: 201 LLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRH 260
Query: 141 RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 200
R + E ++TL +LL ++DGF+ V +I ATNRPDVLDPALLRPGR DR++ +
Sbjct: 261 RGAGLGGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVV 320
Query: 201 PLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 260
P P+ + R ILK+H ++D + + GF+GADL NV EA + A R ++ +
Sbjct: 321 PQPDVKGREMILKVHTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAARKDKSF 380
Query: 261 VIHEDFMKAVRKL 273
V +DF A K+
Sbjct: 381 VEMKDFDDAKDKV 393
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 105/233 (45%), Positives = 152/233 (65%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V++ +GGL D REL+E ++ P+ +P+ FL+ G+ P KGVL YGPPG GKTLLA+AIA+
Sbjct: 206 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 265
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAI----GGRRFSE 144
ANF+ + ++ + GES +RE+F AR PC++F DE+D+I GG
Sbjct: 266 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 325
Query: 145 GTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 204
G +ADR I ++L ++DG V +I ATNRPD++DPA+LRPGRLD+ I IPLP+
Sbjct: 326 GGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 381
Query: 205 EQSRMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
E+SR+ ILK + + +AK ++D + + K+ GF+GADL +C A AIR
Sbjct: 382 EKSRVAILKANLRKSPVAK--DVDLDFLAKMTNGFSGADLTEICQRACKLAIR 432
Score = 296 (109.3 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 67/164 (40%), Positives = 98/164 (59%)
Query: 102 IIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 161
I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +R + +LL
Sbjct: 6 IMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLT 62
Query: 162 QLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAK 221
+DG Q V ++ ATNRP+ +DPAL R GR DR+++I +P+ R+EIL+IH +
Sbjct: 63 LMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKL 122
Query: 222 HGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHED 265
++D E V G GADL +C+EA + AIR + D + ED
Sbjct: 123 ADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLED 166
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 512 (185.3 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 106/253 (41%), Positives = 154/253 (60%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E +P+ E V Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A + P IIF+D
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 304
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
E+DAI +R E T + E +R + +LL +DG Q V ++ ATNRP+ +DPAL R G
Sbjct: 305 ELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+++I +P+ R+EIL+IH + ++D E V G GADL +C+EA +
Sbjct: 362 RFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQ 421
Query: 253 AIRAERDYVIHED 265
AIR + D + ED
Sbjct: 422 AIRKKMDLIDLED 434
Score = 510 (184.6 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 107/233 (45%), Positives = 152/233 (65%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V++ +GGL D REL+E ++ P+ +P+ FL+ G+ P KGVL YGPPG GKTLLA+AIA+
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAI----GGRRFSE 144
ANF+ + ++ + GES +RE+F AR PC++F DE+D+I GG
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 145 GTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 204
G +ADR I ++L ++DG V +I ATNRPD++DPA+LRPGRLD+ I IPLP+
Sbjct: 594 GGAADRVIN----QILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649
Query: 205 EQSRMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
E+SRM ILK + + +AK ++D+ A K+ GF+GADL +C A AIR
Sbjct: 650 EKSRMAILKANLRKSPVAKDVDVDFLA--KMTNGFSGADLTEICQRACKLAIR 700
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 512 (185.3 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 106/253 (41%), Positives = 154/253 (60%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E +P+ E V Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A + P IIF+D
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 304
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
E+DAI +R E T + E +R + +LL +DG Q V ++ ATNRP+ +DPAL R G
Sbjct: 305 ELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+++I +P+ R+EIL+IH + ++D E V G GADL +C+EA +
Sbjct: 362 RFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQ 421
Query: 253 AIRAERDYVIHED 265
AIR + D + ED
Sbjct: 422 AIRKKMDLIDLED 434
Score = 508 (183.9 bits), Expect = 3.8e-48, P = 3.8e-48
Identities = 105/233 (45%), Positives = 152/233 (65%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V++ +GGL D REL+E ++ P+ +P+ FL+ G+ P KGVL YGPPG GKTLLA+AIA+
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAI----GGRRFSE 144
ANF+ + ++ + GES +RE+F AR PC++F DE+D+I GG
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 145 GTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 204
G +ADR I ++L ++DG V +I ATNRPD++DPA+LRPGRLD+ I IPLP+
Sbjct: 594 GGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649
Query: 205 EQSRMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
E+SR+ ILK + + +AK ++D + + K+ GF+GADL +C A AIR
Sbjct: 650 EKSRIAILKANLRKSPVAK--DVDLDFLAKMTNGFSGADLTEICQRACKLAIR 700
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 512 (185.3 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 105/234 (44%), Positives = 153/234 (65%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
N+++ +GGL D REL+E ++ P+ +P+ FL+ G+ P KGVL YGPPG GKTLLA+AIA
Sbjct: 473 NITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA 532
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAI----GGRRFS 143
+ ANF+ + ++ + GES +RE+F AR PC++F DE+D+I GG
Sbjct: 533 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGD 592
Query: 144 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 203
G +ADR I ++L ++DG V +I ATNRPD++DPA+LRPGRLD+ I IPLP
Sbjct: 593 GGGAADRVIN----QILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 204 NEQSRMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
+E+SR+ ILK + + I+K ++D + + K+ GF+GADL +C A AIR
Sbjct: 649 DEKSRIAILKANLRKSPISK--DVDLDFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 512 (185.3 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 106/253 (41%), Positives = 155/253 (61%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E +P+ E V Y +GG+ Q+ +++E +ELPL +P LF +G+KPP+G+LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A + P IIF+D
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 304
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
E+DAI +R E T + E +R + +LL +DG Q V ++ ATNRP+ +DPAL R G
Sbjct: 305 ELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+++I +P+ R+EIL+IH + ++D E V G GADL +C+EA +
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 421
Query: 253 AIRAERDYVIHED 265
AIR + D + ED
Sbjct: 422 AIRKKMDLIDLED 434
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 514 (186.0 bits), Expect = 1.5e-48, P = 1.5e-48
Identities = 105/260 (40%), Positives = 164/260 (63%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
++ P + D NVS+S +GGL + +L++++E PL +P+ F R+GI+PPKGVLLY
Sbjct: 608 DIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLY 667
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPG KT++A+A+A+ NFL + +++KY+GES R +RE+F AR P IIF D
Sbjct: 668 GPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFD 727
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
E+DA+ R S + A R L +LL ++DG +QL V ++ ATNRPD +D AL+RPG
Sbjct: 728 ELDALAVERGSS-SGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPG 786
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R+DR I +PLP+ +R EIL + + E+D + +V + ++GA++ VC EA +
Sbjct: 787 RIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALL 846
Query: 253 AIRA--ERDYVIHEDFMKAV 270
A+ + D ++ F +A+
Sbjct: 847 ALEENIKADCIMKRHFTQAL 866
Score = 461 (167.3 bits), Expect = 8.4e-43, P = 8.4e-43
Identities = 101/233 (43%), Positives = 150/233 (64%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V+Y +GGL+ Q++ +RE IELPL PELF GI P+G+LLYGPPGTGKT++ARA+A+
Sbjct: 350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 89 NIDANFLKVVSSA-IIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ A ++ V++ II K+ GE+ +R++F A P IIF+DE+DA+ +R EG
Sbjct: 410 EVGA-YVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 466
Query: 148 ADREIQRTLMELLNQLDGFDQLG---KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 204
++ E +R + LL +DG G +V ++ ATNRP LD AL RPGR D++IEI +PN
Sbjct: 467 SEVE-KRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPN 525
Query: 205 EQSRMEILKIHAAGIAKH--GEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
Q R++IL+ + H + + + A G+ GADL+ +C EAG+ A+R
Sbjct: 526 AQDRLDILQKLLRRVP-HLLTKAELLRLANNAHGYVGADLKALCNEAGLHALR 577
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 511 (184.9 bits), Expect = 1.7e-48, P = 1.7e-48
Identities = 102/251 (40%), Positives = 155/251 (61%)
Query: 15 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 74
DP+ E V Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+L+YGP
Sbjct: 184 DPIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGP 243
Query: 75 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 134
PGTGKTL+ARA+A+ A F + I+ K GES +R+ F A + P IIF+DEI
Sbjct: 244 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEI 303
Query: 135 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 194
DAI +R + T + E +R + +LL +DG + + ++ ATNRP+ +DPAL R GR
Sbjct: 304 DAIAPKR--DKTHGEVE-RRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRF 360
Query: 195 DRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 254
DR+I+I +P+ R+E+L+IH + H ++D E + + G GADL ++C+EA + I
Sbjct: 361 DREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQI 420
Query: 255 RAERDYVIHED 265
R + D + ED
Sbjct: 421 REKMDLIDLED 431
Score = 498 (180.4 bits), Expect = 4.7e-47, P = 4.7e-47
Identities = 102/255 (40%), Positives = 158/255 (61%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
N +++ +GGL +EL+E ++ P+ +P+ FL+ G++P +GVL YGPPG GKTLLA+AIA
Sbjct: 470 NTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 529
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ ANF+ V ++ + GES +R++F AR PC++F DE+D+I R
Sbjct: 530 NECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGD 589
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
A R + ++L ++DG V +I ATNRPD++DPA+LRPGRLD+ I IPLP+++S
Sbjct: 590 AGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKS 649
Query: 208 RMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHED 265
R ILK + + +AK E+D + K+ +GF+GADL +C A AIR + I +
Sbjct: 650 REAILKANLRKSPLAK--EVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRRE 707
Query: 266 FMKAVRKLNEAKKLE 280
+A + N A ++
Sbjct: 708 KERAENQ-NSAMDMD 721
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 511 (184.9 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 106/233 (45%), Positives = 152/233 (65%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V++ +GGL D REL+E ++ P+ +P+ FL+ G+ P KGVL YGPPG GKTLLA+AIA+
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAI----GGRRFSE 144
ANF+ + ++ + GES +RE+F AR PC++F DE+D+I GG
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 145 GTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 204
G +ADR I ++L ++DG V +I ATNRPD++DPA+LRPGRLD+ I IPLP+
Sbjct: 594 GGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649
Query: 205 EQSRMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
E+SR+ ILK + + +AK ++D E + K+ GF+GADL +C A AIR
Sbjct: 650 EKSRVAILKANLRKSPVAK--DVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 510 (184.6 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 106/253 (41%), Positives = 154/253 (60%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E +P+ E V Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A + P IIF+D
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 304
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
E+DAI +R E T + E +R + +LL +DG Q V ++ ATNRP+ +DPAL R G
Sbjct: 305 ELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+++I +P+ R+EIL+IH + ++D E V G GADL +C+EA +
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 421
Query: 253 AIRAERDYVIHED 265
AIR + D + ED
Sbjct: 422 AIRKKMDLIDLED 434
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 511 (184.9 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 106/233 (45%), Positives = 152/233 (65%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V++ +GGL D REL+E ++ P+ +P+ FL+ G+ P KGVL YGPPG GKTLLA+AIA+
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAI----GGRRFSE 144
ANF+ + ++ + GES +RE+F AR PC++F DE+D+I GG
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 145 GTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 204
G +ADR I ++L ++DG V +I ATNRPD++DPA+LRPGRLD+ I IPLP+
Sbjct: 594 GGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649
Query: 205 EQSRMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
E+SR+ ILK + + +AK ++D E + K+ GF+GADL +C A AIR
Sbjct: 650 EKSRVAILKANLRKSPVAK--DVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 510 (184.6 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 106/253 (41%), Positives = 154/253 (60%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E +P+ E V Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A + P IIF+D
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 304
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
E+DAI +R E T + E +R + +LL +DG Q V ++ ATNRP+ +DPAL R G
Sbjct: 305 ELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+++I +P+ R+EIL+IH + ++D E V G GADL +C+EA +
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 421
Query: 253 AIRAERDYVIHED 265
AIR + D + ED
Sbjct: 422 AIRKKMDLIDLED 434
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 511 (184.9 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 106/233 (45%), Positives = 152/233 (65%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V++ +GGL D REL+E ++ P+ +P+ FL+ G+ P KGVL YGPPG GKTLLA+AIA+
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAI----GGRRFSE 144
ANF+ + ++ + GES +RE+F AR PC++F DE+D+I GG
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 145 GTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 204
G +ADR I ++L ++DG V +I ATNRPD++DPA+LRPGRLD+ I IPLP+
Sbjct: 594 GGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649
Query: 205 EQSRMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
E+SR+ ILK + + +AK ++D E + K+ GF+GADL +C A AIR
Sbjct: 650 EKSRVAILKANLRKSPVAK--DVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 510 (184.6 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 106/253 (41%), Positives = 154/253 (60%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E +P+ E V Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A + P IIF+D
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 304
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
E+DAI +R E T + E +R + +LL +DG Q V ++ ATNRP+ +DPAL R G
Sbjct: 305 ELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+++I +P+ R+EIL+IH + ++D E V G GADL +C+EA +
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 421
Query: 253 AIRAERDYVIHED 265
AIR + D + ED
Sbjct: 422 AIRKKMDLIDLED 434
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 511 (184.9 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 106/233 (45%), Positives = 152/233 (65%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V++ +GGL D REL+E ++ P+ +P+ FL+ G+ P KGVL YGPPG GKTLLA+AIA+
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAI----GGRRFSE 144
ANF+ + ++ + GES +RE+F AR PC++F DE+D+I GG
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 145 GTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 204
G +ADR I ++L ++DG V +I ATNRPD++DPA+LRPGRLD+ I IPLP+
Sbjct: 594 GGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649
Query: 205 EQSRMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
E+SR+ ILK + + +AK ++D E + K+ GF+GADL +C A AIR
Sbjct: 650 EKSRVAILKANLRKSPVAK--DVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 510 (184.6 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 106/253 (41%), Positives = 154/253 (60%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E +P+ E V Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A + P IIF+D
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 304
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
E+DAI +R E T + E +R + +LL +DG Q V ++ ATNRP+ +DPAL R G
Sbjct: 305 ELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+++I +P+ R+EIL+IH + ++D E V G GADL +C+EA +
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 421
Query: 253 AIRAERDYVIHED 265
AIR + D + ED
Sbjct: 422 AIRKKMDLIDLED 434
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 511 (184.9 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 106/233 (45%), Positives = 152/233 (65%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V++ +GGL D REL+E ++ P+ +P+ FL+ G+ P KGVL YGPPG GKTLLA+AIA+
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAI----GGRRFSE 144
ANF+ + ++ + GES +RE+F AR PC++F DE+D+I GG
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 145 GTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 204
G +ADR I ++L ++DG V +I ATNRPD++DPA+LRPGRLD+ I IPLP+
Sbjct: 594 GGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649
Query: 205 EQSRMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
E+SR+ ILK + + +AK ++D E + K+ GF+GADL +C A AIR
Sbjct: 650 EKSRVAILKANLRKSPVAK--DVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 510 (184.6 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 106/253 (41%), Positives = 154/253 (60%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E +P+ E V Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A + P IIF+D
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 304
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
E+DAI +R E T + E +R + +LL +DG Q V ++ ATNRP+ +DPAL R G
Sbjct: 305 ELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+++I +P+ R+EIL+IH + ++D E V G GADL +C+EA +
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 421
Query: 253 AIRAERDYVIHED 265
AIR + D + ED
Sbjct: 422 AIRKKMDLIDLED 434
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 511 (184.9 bits), Expect = 2.0e-48, P = 2.0e-48
Identities = 106/233 (45%), Positives = 152/233 (65%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V++ +GGL D REL+E ++ P+ +P+ FL+ G+ P KGVL YGPPG GKTLLA+AIA+
Sbjct: 490 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 549
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAI----GGRRFSE 144
ANF+ + ++ + GES +RE+F AR PC++F DE+D+I GG
Sbjct: 550 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 609
Query: 145 GTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 204
G +ADR I ++L ++DG V +I ATNRPD++DPA+LRPGRLD+ I IPLP+
Sbjct: 610 GGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 665
Query: 205 EQSRMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
E+SR+ ILK + + +AK ++D E + K+ GF+GADL +C A AIR
Sbjct: 666 EKSRVAILKANLRKSPVAK--DVDLEFLAKMTNGFSGADLTEICQRACKLAIR 716
Score = 510 (184.6 bits), Expect = 2.6e-48, P = 2.6e-48
Identities = 106/253 (41%), Positives = 154/253 (60%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E +P+ E V Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+LLY
Sbjct: 201 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 260
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A + P IIF+D
Sbjct: 261 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 320
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
E+DAI +R E T + E +R + +LL +DG Q V ++ ATNRP+ +DPAL R G
Sbjct: 321 ELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 377
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+++I +P+ R+EIL+IH + ++D E V G GADL +C+EA +
Sbjct: 378 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 437
Query: 253 AIRAERDYVIHED 265
AIR + D + ED
Sbjct: 438 AIRKKMDLIDLED 450
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 511 (184.9 bits), Expect = 2.2e-48, P = 2.2e-48
Identities = 104/258 (40%), Positives = 160/258 (62%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E +P+ + V Y +GG Q+ ++RE +ELPL +P+LF +GIKPP+GVL+Y
Sbjct: 195 EGEPINREDEENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMY 254
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + ++ K GES +R+ F A + P IIF+D
Sbjct: 255 GPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFID 314
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
EID+I +R + T+ + E +R + +LL +DG V +I ATNRP+ +DPAL R G
Sbjct: 315 EIDSIAPKR--DKTNGEVE-RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFG 371
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+++I +P+ R+E+L+IH + ++D EA+ G+ GAD+ ++C+EA M
Sbjct: 372 RFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQ 431
Query: 253 AIRAERDYV-IHEDFMKA 269
IR + D + + ED + A
Sbjct: 432 QIREKMDLIDLDEDEIDA 449
Score = 479 (173.7 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 94/228 (41%), Positives = 142/228 (62%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
NV++ VGGL + EL+E++E P+++P+ + + G+ P KGVL YGPPGTGKTLLA+A+A
Sbjct: 483 NVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVA 542
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ + ANF+ V ++ + GES IR++F AR P ++F+DE+D+I R
Sbjct: 543 TEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGD 602
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
A R + +LL ++DG + V +I ATNRPD +DPA+LRPGRLD+ I +PLP+E +
Sbjct: 603 AGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENA 662
Query: 208 RMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
R+ IL ++ A+ K +GF+GADL + A AI+
Sbjct: 663 RLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIK 710
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 510 (184.6 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 106/253 (41%), Positives = 154/253 (60%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E +P+ E V Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A + P IIF+D
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 304
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
E+DAI +R E T + E +R + +LL +DG Q V ++ ATNRP+ +DPAL R G
Sbjct: 305 ELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+++I +P+ R+EIL+IH + ++D E V G GADL +C+EA +
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 421
Query: 253 AIRAERDYVIHED 265
AIR + D + ED
Sbjct: 422 AIRKKMDLIDLED 434
Score = 508 (183.9 bits), Expect = 3.8e-48, P = 3.8e-48
Identities = 105/233 (45%), Positives = 152/233 (65%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V++ +GGL D REL++ ++ P+ +P+ FL+ G+ P KGVL YGPPG GKTLLA+AIA+
Sbjct: 474 VTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAI----GGRRFSE 144
ANF+ + ++ + GES +RE+F AR PC++F DE+D+I GG
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 145 GTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 204
G +ADR I ++L ++DG V +I ATNRPD++DPA+LRPGRLD+ I IPLP+
Sbjct: 594 GGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649
Query: 205 EQSRMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
E+SR+ ILK + + +AK ++D E + K+ GF+GADL +C A AIR
Sbjct: 650 EKSRVAILKANLRKSPVAK--DVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 508 (183.9 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 105/233 (45%), Positives = 152/233 (65%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V++ +GGL D REL+E ++ P+ +P+ FL+ G+ P KGVL YGPPG GKTLLA+AIA+
Sbjct: 472 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 531
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAI----GGRRFSE 144
ANF+ + ++ + GES +RE+F AR PC++F DE+D+I GG
Sbjct: 532 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 591
Query: 145 GTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 204
G +ADR I ++L ++DG V +I ATNRPD++DPA+LRPGRLD+ I IPLP+
Sbjct: 592 GGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 647
Query: 205 EQSRMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
E+SR+ ILK + + +AK ++D + + K+ GF+GADL +C A AIR
Sbjct: 648 EKSRVAILKANLRKSPVAK--DVDLDFLAKMTNGFSGADLTEICQRACKLAIR 698
Score = 429 (156.1 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 97/254 (38%), Positives = 142/254 (55%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E +P+ E V Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH-QPCIIFM 131
GPPGTGKTL+ARA+A+ A F + I+ K GE R+ A + IF
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFK 304
Query: 132 DEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRP 191
+ D S T + E +R + +LL +DG Q V ++ ATNRP+ +DPAL R
Sbjct: 305 SD-DCFP----SPQTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF 358
Query: 192 GRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGM 251
GR DR+++I +P+ R+EIL+IH + ++D E V G GADL +C+EA +
Sbjct: 359 GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL 418
Query: 252 SAIRAERDYVIHED 265
AIR + D + ED
Sbjct: 419 QAIRKKMDLIDLED 432
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 508 (183.9 bits), Expect = 3.9e-48, P = 3.9e-48
Identities = 105/233 (45%), Positives = 152/233 (65%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V++ +GGL D REL+E ++ P+ +P+ FL+ G+ P KGVL YGPPG GKTLLA+AIA+
Sbjct: 478 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 537
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAI----GGRRFSE 144
ANF+ + ++ + GES +RE+F AR PC++F DE+D+I GG
Sbjct: 538 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 597
Query: 145 GTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 204
G +ADR I ++L ++DG V +I ATNRPD++DPA+LRPGRLD+ I IPLP+
Sbjct: 598 GGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 653
Query: 205 EQSRMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
E+SR+ ILK + + +AK ++D + + K+ GF+GADL +C A AIR
Sbjct: 654 EKSRVAILKANLRKSPVAK--DVDLDFLAKMTNGFSGADLTEICQRACKLAIR 704
Score = 500 (181.1 bits), Expect = 3.0e-47, P = 3.0e-47
Identities = 102/254 (40%), Positives = 150/254 (59%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E +P+ E V Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F + P IIF+D
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFID 304
Query: 133 EIDAIGGRRFSEGTSADREIQRTLM-ELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRP 191
E+DAI E++R ++ +LL +DG Q V ++ ATNRP+ +DPAL R
Sbjct: 305 ELDAIASDDCFPSPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF 364
Query: 192 GRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGM 251
GR DR+++I +P+ R+EIL+IH + ++D E V G GADL +C+EA +
Sbjct: 365 GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL 424
Query: 252 SAIRAERDYVIHED 265
AIR + D + ED
Sbjct: 425 QAIRKKMDLIDLED 438
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 508 (183.9 bits), Expect = 4.3e-48, P = 4.3e-48
Identities = 105/258 (40%), Positives = 159/258 (61%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E +P+ + + V Y +GG Q+ ++RE +ELPL +P+LF +GIKPP+GVLLY
Sbjct: 203 EGEPIQRDEEENNLNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLY 262
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A + P IIF+D
Sbjct: 263 GPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFID 322
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
EID+I +R E T+ + E +R + +LL +DG V ++ ATNRP+ +DPAL R G
Sbjct: 323 EIDSIAPKR--EKTNGEVE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFG 379
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+++I +P+ R+EIL+IH + ++D E + G+ G+D+ +C+EA M
Sbjct: 380 RFDREVDIGIPDPTGRLEILQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQ 439
Query: 253 AIRAERDYV-IHEDFMKA 269
IR + D + + ED + A
Sbjct: 440 QIREKMDLIDLDEDTIDA 457
Score = 470 (170.5 bits), Expect = 6.3e-44, P = 6.3e-44
Identities = 95/228 (41%), Positives = 137/228 (60%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
NV + +GGL + ++LRE ++ P+ +PE FL+ G+ P +GVL YGPPGTGKT+LA+A+A
Sbjct: 492 NVRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVA 551
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ ANF+ V ++ + GES IR++F AR PCI+F+DE+D+I R
Sbjct: 552 NECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGD 611
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
A R + +LL ++DG V +I ATNRP+ LDPAL RPGRLD I +PLP+E
Sbjct: 612 AGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELG 671
Query: 208 RMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
R+ ILK ++D + + GF+GADL + A AI+
Sbjct: 672 RLSILKAQLRKTPVSDDVDLQYIANKTHGFSGADLGFITQRAVKIAIK 719
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 507 (183.5 bits), Expect = 5.6e-48, P = 5.6e-48
Identities = 104/258 (40%), Positives = 158/258 (61%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E +P+ + V Y +GG Q+ ++RE +ELPL +P+LF +GIKPP+G+L+Y
Sbjct: 206 EGEPIQREDEENNLNEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMY 265
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A + P IIF+D
Sbjct: 266 GPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFID 325
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
EID+I +R E T+ + E +R + +LL +DG V ++ ATNRP+ +DPAL R G
Sbjct: 326 EIDSIAPKR--EKTNGEVE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFG 382
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+++I +P+ R+EIL IH + ++D E + G+ G+DL ++C+EA M
Sbjct: 383 RFDREVDIGIPDPTGRLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQ 442
Query: 253 AIRAERDYV-IHEDFMKA 269
IR + D + + ED + A
Sbjct: 443 QIREKMDLIDLDEDTIDA 460
Score = 459 (166.6 bits), Expect = 1.0e-42, P = 1.0e-42
Identities = 95/228 (41%), Positives = 136/228 (59%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
NV + +GGL + REL ES++ P+ +PE F + G+ P +GVL YGPPGTGKT+LA+A+A
Sbjct: 495 NVRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVA 554
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ ANF+ V ++ + GES IR++F AR PC++F+DE+D+I R
Sbjct: 555 NECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGD 614
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
A R + +LL ++DG V +I ATNRP+ LD AL+RPGRLD + +PLP++ S
Sbjct: 615 AGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQAS 674
Query: 208 RMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
R ILK ++D E + GF+GADL V A AI+
Sbjct: 675 REGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIK 722
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 508 (183.9 bits), Expect = 6.7e-48, P = 6.7e-48
Identities = 100/245 (40%), Positives = 158/245 (64%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
++ P + D NVS+S +GGL + +L++++E PL +PE F+R+GI+PPKGVLLY
Sbjct: 608 DIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLY 667
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPG KT++A+A+A+ NFL + +++KY+GES R +RE+F AR P IIF D
Sbjct: 668 GPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVSPSIIFFD 727
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
E+DA+ R S + A R L +LL ++DG +QL V ++ ATNRPD +D AL+RPG
Sbjct: 728 ELDALAIERGSS-SGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPG 786
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R+DR I +PLP+ +R EIL + + +++ + ++ + ++GA++ VC EA +
Sbjct: 787 RIDRIIYVPLPDAATRREILNLQFHSMPISNDVNLDELIFQTDTYSGAEIIAVCREAALL 846
Query: 253 AIRAE 257
A+ +
Sbjct: 847 ALEED 851
Score = 472 (171.2 bits), Expect = 5.4e-44, P = 5.4e-44
Identities = 98/230 (42%), Positives = 148/230 (64%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V+Y +GGLS Q++ +RE IELPL PELF GI PP+GVLLYGPPGTGKT++ARA+A+
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 409
Query: 89 NIDANFLKVVSSA-IIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ A ++ V++ II K+ GE+ +R++F A P IIF+DE+DA+ +R
Sbjct: 410 EVGA-YVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNE 468
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
++ + +L+ L++ + G+V ++ ATNRP LD AL RPGR D++IEI +PN
Sbjct: 469 VEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAAD 528
Query: 208 RMEILKIHAAGIAKH--GEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
R++IL+ + H E++ + A G+ GADL+ +C EAG+ A+R
Sbjct: 529 RLDILQKLLQRVP-HLLTEVELLQLANSAHGYVGADLKALCNEAGLYALR 577
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 102/253 (40%), Positives = 153/253 (60%)
Query: 22 LHEDPGN-VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 80
LH D V+++ V G+ + EL E +E L NP + +G + PKGVLL+G PGTGKT
Sbjct: 147 LHTDEKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQPGTGKT 205
Query: 81 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 140
LLARAIA F + S ++ ++G A +R++F A+ + PCI+F+DEIDA+G +
Sbjct: 206 LLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQ 265
Query: 141 RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 200
R + E ++TL +LL ++DGF+ + +I ATNRPD+LDPALLRPGR DR I +
Sbjct: 266 RGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVV 325
Query: 201 PLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 260
P+ R EILK+H G ++D + + + GF GADL N+ EA + A R +
Sbjct: 326 DTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKV 385
Query: 261 VIHEDFMKAVRKL 273
+ E+ +A+ ++
Sbjct: 386 INMEEMEEAIERV 398
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 102/253 (40%), Positives = 153/253 (60%)
Query: 22 LHEDPGN-VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 80
LH D V+++ V G+ + EL E +E L NP + +G + PKGVLL+G PGTGKT
Sbjct: 147 LHTDEKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQPGTGKT 205
Query: 81 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 140
LLARAIA F + S ++ ++G A +R++F A+ + PCI+F+DEIDA+G +
Sbjct: 206 LLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQ 265
Query: 141 RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 200
R + E ++TL +LL ++DGF+ + +I ATNRPD+LDPALLRPGR DR I +
Sbjct: 266 RGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVV 325
Query: 201 PLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 260
P+ R EILK+H G ++D + + + GF GADL N+ EA + A R +
Sbjct: 326 DTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKV 385
Query: 261 VIHEDFMKAVRKL 273
+ E+ +A+ ++
Sbjct: 386 INMEEMEEAIERV 398
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 101/246 (41%), Positives = 155/246 (63%)
Query: 29 VSYSAVGGLSDQIR-ELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
V++ V G +DQ + EL+E ++ L NP+ + +G K PKG LL GPPGTGKTLLARA+A
Sbjct: 247 VTFGDVAG-ADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVA 304
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
F +S ++ ++G A +R++F A+ PCI+F+DEIDA+G +R +
Sbjct: 305 GEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGG 364
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
+ E ++T+ +LL ++DGF V ++ ATNRPDVLD ALLRPGR DR++ + P+
Sbjct: 365 GNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 424
Query: 208 RMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFM 267
R++ILK+H+ G A ++DYE V + GF GADL+N+ EA + A R E + ++
Sbjct: 425 RVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEIS 484
Query: 268 KAVRKL 273
A+ ++
Sbjct: 485 DALERI 490
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 504 (182.5 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 101/242 (41%), Positives = 154/242 (63%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V Y +GG Q+ ++RE +ELPL +P+LF +GIKPP+G+L+YGPPGTGKTL+ARA+A+
Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 280
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 148
A F + I+ K GES +R+ F A + P IIF+DEID+I +R E T+
Sbjct: 281 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNG 338
Query: 149 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 208
+ E +R + +LL +DG V ++ ATNRP+ +DPAL R GR DR++++ +P+ R
Sbjct: 339 EVE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGR 397
Query: 209 MEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYV-IHEDFM 267
+EIL+IH + ++D E + G+ G+DL ++C+EA M IR + D + + ED +
Sbjct: 398 LEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEI 457
Query: 268 KA 269
A
Sbjct: 458 DA 459
Score = 503 (182.1 bits), Expect = 1.5e-47, P = 1.5e-47
Identities = 109/250 (43%), Positives = 154/250 (61%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
NV + +GGL + RELRE++++P+M E FLR G+ P KGVL +GPPGTGKTLLA+AIA
Sbjct: 493 NVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIA 552
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIG-GRRFSEGT 146
+ ANF+ V ++ + GES +R++F AR PC++F+DE+D+I R S G
Sbjct: 553 NECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGD 612
Query: 147 SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 206
S + R + +LL ++DG + V +I ATNRPD +DPAL+RPGRLD+ I +PLP+E+
Sbjct: 613 SGGGD--RVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEE 670
Query: 207 SRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDF 266
+R IL+ ++D AV K GF+GADL V A AI+ I ED
Sbjct: 671 ARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDS----IEED- 725
Query: 267 MKAVRKLNEA 276
+K + EA
Sbjct: 726 IKRENETGEA 735
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 501 (181.4 bits), Expect = 1.5e-47, P = 1.5e-47
Identities = 106/256 (41%), Positives = 151/256 (58%)
Query: 20 NMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGK 79
N + V +S V GL + E+ E + L NP+ F +G K P+G +L GPPGTGK
Sbjct: 290 NKFEKSTSTVKFSDVAGLGEAKVEIEEFVNF-LKNPKKFHDIGAKIPRGAILVGPPGTGK 348
Query: 80 TLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGG 139
TL+A+A A + F S ++ ++G +R++F AR + PCI+F+DEIDA+G
Sbjct: 349 TLIAKATAGEANVPFYSTSGSDFVEMFVGVGPSRVRDLFEQARKNAPCIVFIDEIDAVGR 408
Query: 140 RRFSEGTSADR-EIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKI 198
R G S E + TL +LL ++DGF L V ++ ATNRPD+LD ALLRPGR DR+I
Sbjct: 409 ARGKGGFSGSNDERENTLNQLLVEMDGFKPLKNVVVLAATNRPDILDKALLRPGRFDRQI 468
Query: 199 EIPLPNEQSRMEILKIHAAGIAKHGEIDY-EAVVKLAEGFNGADLRNVCTEAGMSAIRAE 257
I P+ +SR EI ++H A + I+Y E + KL GF+GAD+ NVC EA + A R
Sbjct: 469 TIDNPDLKSREEIFRVHLAALLLDKSINYAERLSKLTPGFSGADIANVCNEAALIAARRH 528
Query: 258 RDYVIHEDFMKAVRKL 273
+ + E F AV ++
Sbjct: 529 AEIITLEHFDAAVDRV 544
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 502 (181.8 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 102/237 (43%), Positives = 149/237 (62%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V Y +GG+ Q+ ++RE +ELPL +P+LF +G+KPPKG+LLYGPPG GKT++ARA+A+
Sbjct: 199 VGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVAN 258
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 148
A F + I+ K GES +R+ F A + P IIF+DEID+I +R E T
Sbjct: 259 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTQG 316
Query: 149 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 208
+ E +R + +LL +DG V ++ ATNRP+ +DPAL R GR DR+I+I +P+ R
Sbjct: 317 EVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGR 375
Query: 209 MEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHED 265
+EI++IH + +D EAV G+ GADL +CTE+ + IR + D + ED
Sbjct: 376 LEIMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVIDLED 432
Score = 495 (179.3 bits), Expect = 9.5e-47, P = 9.5e-47
Identities = 102/234 (43%), Positives = 151/234 (64%)
Query: 30 SYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASN 89
++ +GGL RELRE+++ P+ +PE F + G++P KGVL YGPPG GKTLLA+AIA+
Sbjct: 473 TWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANE 532
Query: 90 IDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSAD 149
ANF+ + ++ + GES +RE+F AR PC++F DE+D+I R S A
Sbjct: 533 CQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSSQGDAG 592
Query: 150 REIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRM 209
R + ++L ++DG + V +I ATNRPD++DPA+LRPGRLD+ I IPLP+ SR+
Sbjct: 593 GAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRV 652
Query: 210 EILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRA--ERD 259
ILK ++ + +AK ++D E + + +GF+GADL +C A AIR E+D
Sbjct: 653 AILKACLNKSPVAK--DVDLEFLGQKTQGFSGADLTEICQRACKLAIRESIEKD 704
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 476 (172.6 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 95/245 (38%), Positives = 150/245 (61%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V++ V G+ + ++ E +E L PE F VG K PKGVLL GPPGTGKTLLA+AIA
Sbjct: 224 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAG 282
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 148
F + S ++ ++G A +R++F A+++ PCI+F+DEIDA+G +R +
Sbjct: 283 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGG 342
Query: 149 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 208
+ E ++TL +LL ++DGF+ V ++ ATNR D+LD ALLRPGR DR++ + +P+ + R
Sbjct: 343 NDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGR 402
Query: 209 MEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMK 268
+ILK+HA ++ E + GF+GADL N+ EA + A R R + ++
Sbjct: 403 TDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDD 462
Query: 269 AVRKL 273
++ ++
Sbjct: 463 SIDRI 467
Score = 41 (19.5 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 12 REVDPVVYNMLHEDPGNVSYSAVGGLS 38
+ +D +N ED G+V ++ +G L+
Sbjct: 152 KNIDFAAHNA-QEDQGSVLFNLIGNLA 177
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 501 (181.4 bits), Expect = 2.3e-47, P = 2.3e-47
Identities = 101/253 (39%), Positives = 157/253 (62%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E DP+ E ++ Y +GG+ Q+ +++E +ELPL +P+LF +GIKPP+G+LL+
Sbjct: 191 EGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLF 250
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ + F + ++ K GES +R+ F +QP I+F+D
Sbjct: 251 GPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFID 310
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
EIDAI +R E T+ + E +R + +LL +DG + +I ATNRP+ +D AL R G
Sbjct: 311 EIDAIAPKR--EKTNGEVE-RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFG 367
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+I+I +P+ R+EIL+IH + ++D E + GF GADL ++C+EA +
Sbjct: 368 RFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQ 427
Query: 253 AIRAERDYVIHED 265
IR + + + ED
Sbjct: 428 QIREKMELIDLED 440
Score = 487 (176.5 bits), Expect = 8.1e-46, P = 8.1e-46
Identities = 103/261 (39%), Positives = 155/261 (59%)
Query: 24 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 83
E P N ++S +GGL + REL+E ++ P+ +PE +L+ G++P +GVL YGPPG GKTLLA
Sbjct: 476 ETP-NTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLA 534
Query: 84 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIG-GRRF 142
+AIA+ ANF+ + ++ + GES +R++F AR PC++F DE+D+I R
Sbjct: 535 KAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGG 594
Query: 143 SEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPL 202
G R + ++L ++DG + V +I ATNRPD++DPA+LRPGRLD+ I IPL
Sbjct: 595 GAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL 654
Query: 203 PNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVI 262
P+E SR +ILK ++D + K GF+GADL +C A AIR + I
Sbjct: 655 PDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEI 714
Query: 263 HEDFMKAVRKLNEAKKLESSA 283
+ + R+ + +E A
Sbjct: 715 RIEKERQDRQARGEELMEDDA 735
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 501 (181.4 bits), Expect = 2.3e-47, P = 2.3e-47
Identities = 101/253 (39%), Positives = 157/253 (62%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E DP+ E ++ Y +GG+ Q+ +++E +ELPL +P+LF +GIKPP+G+LL+
Sbjct: 191 EGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLF 250
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ + F + ++ K GES +R+ F +QP I+F+D
Sbjct: 251 GPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFID 310
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
EIDAI +R E T+ + E +R + +LL +DG + +I ATNRP+ +D AL R G
Sbjct: 311 EIDAIAPKR--EKTNGEVE-RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFG 367
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+I+I +P+ R+EIL+IH + ++D E + GF GADL ++C+EA +
Sbjct: 368 RFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQ 427
Query: 253 AIRAERDYVIHED 265
IR + + + ED
Sbjct: 428 QIREKMELIDLED 440
Score = 487 (176.5 bits), Expect = 8.1e-46, P = 8.1e-46
Identities = 103/261 (39%), Positives = 155/261 (59%)
Query: 24 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 83
E P N ++S +GGL + REL+E ++ P+ +PE +L+ G++P +GVL YGPPG GKTLLA
Sbjct: 476 ETP-NTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLA 534
Query: 84 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIG-GRRF 142
+AIA+ ANF+ + ++ + GES +R++F AR PC++F DE+D+I R
Sbjct: 535 KAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGG 594
Query: 143 SEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPL 202
G R + ++L ++DG + V +I ATNRPD++DPA+LRPGRLD+ I IPL
Sbjct: 595 GAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL 654
Query: 203 PNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVI 262
P+E SR +ILK ++D + K GF+GADL +C A AIR + I
Sbjct: 655 PDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEI 714
Query: 263 HEDFMKAVRKLNEAKKLESSA 283
+ + R+ + +E A
Sbjct: 715 RIEKERQDRQARGEELMEDDA 735
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 500 (181.1 bits), Expect = 3.4e-47, P = 3.4e-47
Identities = 105/253 (41%), Positives = 154/253 (60%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E DP+ + E + Y +GG Q+ ++RE IELPL +P LF +G+KPP+GVLLY
Sbjct: 189 EGDPIKRDD-EEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLY 247
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPG+GKT +ARA+A+ A F + ++ K GE+ +R F A + P IIF+D
Sbjct: 248 GPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFID 307
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
EID+I +R E T+ + E +R + +LL +DG G+V +I ATNR + +DPAL R G
Sbjct: 308 EIDSIAPKR--EKTNGEVE-RRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFG 364
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+I+I +P++ R EIL+IH + ++ E + GF GADL +CTEA ++
Sbjct: 365 RFDREIDIGVPDDNGRFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALT 424
Query: 253 AIRAERDYVIHED 265
IR + D + ED
Sbjct: 425 CIREKMDVIDLED 437
Score = 457 (165.9 bits), Expect = 1.7e-42, P = 1.7e-42
Identities = 106/256 (41%), Positives = 152/256 (59%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
NV + +GGL + LRE I P+ +P+ F + G+ P +GVL YGPPG GKTLLA+A+A
Sbjct: 476 NVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVA 535
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
S ANF+ + ++ + GES +RE+F AR PC++F DE+D+IG +R S
Sbjct: 536 SECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGD 595
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
R + +LL ++DG + I ATNRP++LD ALLRPGRLD+ I IPLP+ +
Sbjct: 596 GSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGA 655
Query: 208 RMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHED 265
R+ IL + +A++ ID+ A K A GF+GADL +C A +AIR D + E+
Sbjct: 656 RISILTAILRKCPVAENVPIDFLAQ-KTA-GFSGADLAELCQRAARAAIR---DAIDAEE 710
Query: 266 FMKAVRKLNEAKKLES 281
K KL + K E+
Sbjct: 711 MNKK-SKLELSNKKEN 725
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 500 (181.1 bits), Expect = 3.4e-47, P = 3.4e-47
Identities = 105/253 (41%), Positives = 154/253 (60%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E DP+ + E + Y +GG Q+ ++RE IELPL +P LF +G+KPP+GVLLY
Sbjct: 189 EGDPIKRDD-EEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLY 247
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPG+GKT +ARA+A+ A F + ++ K GE+ +R F A + P IIF+D
Sbjct: 248 GPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFID 307
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
EID+I +R E T+ + E +R + +LL +DG G+V +I ATNR + +DPAL R G
Sbjct: 308 EIDSIAPKR--EKTNGEVE-RRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFG 364
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+I+I +P++ R EIL+IH + ++ E + GF GADL +CTEA ++
Sbjct: 365 RFDREIDIGVPDDNGRFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALT 424
Query: 253 AIRAERDYVIHED 265
IR + D + ED
Sbjct: 425 CIREKMDVIDLED 437
Score = 457 (165.9 bits), Expect = 1.7e-42, P = 1.7e-42
Identities = 106/256 (41%), Positives = 152/256 (59%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
NV + +GGL + LRE I P+ +P+ F + G+ P +GVL YGPPG GKTLLA+A+A
Sbjct: 476 NVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVA 535
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
S ANF+ + ++ + GES +RE+F AR PC++F DE+D+IG +R S
Sbjct: 536 SECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGD 595
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
R + +LL ++DG + I ATNRP++LD ALLRPGRLD+ I IPLP+ +
Sbjct: 596 GSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGA 655
Query: 208 RMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHED 265
R+ IL + +A++ ID+ A K A GF+GADL +C A +AIR D + E+
Sbjct: 656 RISILTAILRKCPVAENVPIDFLAQ-KTA-GFSGADLAELCQRAARAAIR---DAIDAEE 710
Query: 266 FMKAVRKLNEAKKLES 281
K KL + K E+
Sbjct: 711 MNKK-SKLELSNKKEN 725
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 105/253 (41%), Positives = 153/253 (60%)
Query: 21 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 80
ML ED +++ V G + E+ E +E L P F ++G K PKGVL+ GPPGTGKT
Sbjct: 141 MLTEDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKT 199
Query: 81 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 140
LLA+AIA F + S ++ ++G A +R+MF A+ PCIIF+DEIDA+G +
Sbjct: 200 LLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQ 259
Query: 141 RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 200
R + E ++TL ++L ++DGF+ + +I ATNRPDVLDPALLRPGR DR++ +
Sbjct: 260 RGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVV 319
Query: 201 PLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 260
LP+ + R +ILK+H + +ID + + GF+GADL N+ EA + A R +
Sbjct: 320 GLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRV 379
Query: 261 VIHEDFMKAVRKL 273
V +F KA K+
Sbjct: 380 VSMVEFEKAKDKI 392
>UNIPROTKB|E2RM61 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
Uniprot:E2RM61
Length = 251
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 92/171 (53%), Positives = 126/171 (73%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +GI
Sbjct: 73 TLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIA 132
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR+H
Sbjct: 133 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREH 192
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMI 175
P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K++
Sbjct: 193 APSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVM 243
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 104/256 (40%), Positives = 157/256 (61%)
Query: 18 VYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGT 77
++NM D ++++ V G+ + +E+ E +E L + E F +G + PKG+LL GPPGT
Sbjct: 148 LFNM---DKPTITFANVAGVDEAKQEVGEVVEF-LKSREKFQALGARIPKGILLIGPPGT 203
Query: 78 GKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAI 137
GKTLLA+AIA F + S ++ ++G A +R++F A+ + PCIIF+DEIDA+
Sbjct: 204 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAV 263
Query: 138 GGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRK 197
G +R + E ++TL ++L ++DGFD V +I ATNRPD+LDPALLRPGR DR+
Sbjct: 264 GRQRGAGLGGGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRR 323
Query: 198 IEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAE 257
+ + P+ R ILKIHA G ++ E + K GF+GADL N+ EA + A R
Sbjct: 324 VVLDKPDITGREAILKIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAILAARKN 383
Query: 258 RDYVIHEDFMKAVRKL 273
R V ED +++ ++
Sbjct: 384 RKVVETEDLEESIDRV 399
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 492 (178.3 bits), Expect = 7.9e-47, P = 7.9e-47
Identities = 99/246 (40%), Positives = 156/246 (63%)
Query: 29 VSYSAVGGLSDQIR-ELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
VS++ V G +DQ + EL+E ++ L NP+ + +G K PKG LL GPPGTGKTLLARA+A
Sbjct: 259 VSFADVAG-ADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVA 316
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
F +S ++ ++G A +R++F A+ PCI+F+DEIDA+G +R +
Sbjct: 317 GEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGG 376
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
+ E ++T+ +LL ++DGF V ++ ATNRPDVLD ALLRPGR DR++ + P+
Sbjct: 377 GNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 436
Query: 208 RMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFM 267
R++IL++H+ G A ++D++ V + GF GADL+N+ EA + A R E + ++
Sbjct: 437 RVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEIS 496
Query: 268 KAVRKL 273
A+ ++
Sbjct: 497 DALERI 502
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 102/253 (40%), Positives = 153/253 (60%)
Query: 21 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 80
+L +D V++ V G+ + E++E +E L +P F R+G K P GVLL GPPGTGKT
Sbjct: 145 LLSQDQVKVTFDDVAGVDEAKEEVKELVEF-LRDPGKFQRLGGKMPCGVLLVGPPGTGKT 203
Query: 81 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 140
LLA+A+A F + S ++ ++G A +R+MF A+ PCIIF+DEIDA+G
Sbjct: 204 LLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEIDAVGRH 263
Query: 141 RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 200
R + E ++TL +LL ++DGF+ + ++ ATNRPDVLDPALLRPGR DR++ +
Sbjct: 264 RGAGLGGGHDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRFDRQVVV 323
Query: 201 PLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 260
PLP+ + R ILK+H + ++ + + GF+GADL N+ EA + A R +
Sbjct: 324 PLPDIKGREYILKVHMNKLPLAKDVKASVIARGTPGFSGADLANIVNEAALFAARENKKD 383
Query: 261 VIHEDFMKAVRKL 273
V +F +A K+
Sbjct: 384 VSMSEFERAKDKI 396
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 495 (179.3 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 99/242 (40%), Positives = 149/242 (61%)
Query: 24 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 83
E P N ++S +GGL + REL+E ++ P+ +PE +L+ G++P +GVL YGPPG GKTLLA
Sbjct: 475 ETP-NTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLA 533
Query: 84 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 143
+AIA+ ANF+ + ++ + GES +R++F AR PC++F DE+D+I R
Sbjct: 534 KAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGG 593
Query: 144 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 203
A R + ++L ++DG + V +I ATNRPD++DPA+LRPGRLD+ I IPLP
Sbjct: 594 SVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLP 653
Query: 204 NEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIH 263
+E SR++I K ++D + K GF+GADL +C A AIR + I
Sbjct: 654 DEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIR 713
Query: 264 ED 265
++
Sbjct: 714 QE 715
Score = 494 (179.0 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 103/253 (40%), Positives = 153/253 (60%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E DP+ E V Y +GG+ Q+ +++E +ELPL +P+LF +G+KPP+G+LL+
Sbjct: 190 EGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLF 249
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F + P I+F+D
Sbjct: 250 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFID 309
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
EIDAI +R E + E +R + +LL +DG V +I ATNRP+ +D AL R G
Sbjct: 310 EIDAIAPKR--EKAHGEVE-KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFG 366
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+I+I +P+ R+EIL+IH + ++D E V GF GADL ++C+EA +
Sbjct: 367 RFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQ 426
Query: 253 AIRAERDYVIHED 265
IR + + + ED
Sbjct: 427 QIREKMELIDLED 439
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 495 (179.3 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 99/242 (40%), Positives = 149/242 (61%)
Query: 24 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 83
E P N ++S +GGL + REL+E ++ P+ +PE +L+ G++P +GVL YGPPG GKTLLA
Sbjct: 475 ETP-NTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLA 533
Query: 84 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 143
+AIA+ ANF+ + ++ + GES +R++F AR PC++F DE+D+I R
Sbjct: 534 KAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGG 593
Query: 144 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 203
A R + ++L ++DG + V +I ATNRPD++DPA+LRPGRLD+ I IPLP
Sbjct: 594 SVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLP 653
Query: 204 NEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIH 263
+E SR++I K ++D + K GF+GADL +C A AIR + I
Sbjct: 654 DEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIR 713
Query: 264 ED 265
++
Sbjct: 714 QE 715
Score = 494 (179.0 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 103/253 (40%), Positives = 153/253 (60%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E DP+ E V Y +GG+ Q+ +++E +ELPL +P+LF +G+KPP+G+LL+
Sbjct: 190 EGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLF 249
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F + P I+F+D
Sbjct: 250 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFID 309
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
EIDAI +R E + E +R + +LL +DG V +I ATNRP+ +D AL R G
Sbjct: 310 EIDAIAPKR--EKAHGEVE-KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFG 366
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+I+I +P+ R+EIL+IH + ++D E V GF GADL ++C+EA +
Sbjct: 367 RFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQ 426
Query: 253 AIRAERDYVIHED 265
IR + + + ED
Sbjct: 427 QIREKMELIDLED 439
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 100/254 (39%), Positives = 157/254 (61%)
Query: 21 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 80
+++ + V +S V G+ + E++E ++ L PE ++++G K PKG+LL GPPGTGKT
Sbjct: 167 LVNSEKPKVKFSDVAGVEEAKEEVKEIVDF-LKYPERYIKLGAKIPKGLLLVGPPGTGKT 225
Query: 81 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 140
LLA+A+A D F V S+ I+ ++G A +R++F A+ P I+F+DEIDAIG
Sbjct: 226 LLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDAIGKS 285
Query: 141 RFSEGT-SADREIQRTLMELLNQLDGFD-QLGKVKMIMATNRPDVLDPALLRPGRLDRKI 198
R + G + E ++TL +LL ++DGF + V ++ ATNRP+VLD ALLRPGR DR++
Sbjct: 286 RAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFDRQV 345
Query: 199 EIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAER 258
+ P+ + R +ILK+H + ++ E + +L G GADL N+ EA + A R +
Sbjct: 346 LVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANIINEAALLAGRDSK 405
Query: 259 DYVIHEDFMKAVRK 272
YV D ++AV +
Sbjct: 406 KYVEQNDLVEAVER 419
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 103/253 (40%), Positives = 151/253 (59%)
Query: 21 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 80
+L + V++ V G+ + EL E +E L P+ F ++G K PKG LL GPPGTGKT
Sbjct: 146 LLSDRSNKVTFHDVAGIDEAKEELAEIVEF-LREPKKFQKLGGKIPKGCLLIGPPGTGKT 204
Query: 81 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 140
LLA+AIA F + S ++ ++G A +R+MF + + PC+IF+DEIDA+G
Sbjct: 205 LLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRH 264
Query: 141 RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 200
R + E ++TL +LL ++DGF+ V +I ATNRPDVLDPALLRPGR DR+I I
Sbjct: 265 RGVGFGGGNDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITI 324
Query: 201 PLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 260
+P+ R +IL++H I ++ + + GF+GADL N+ E+ + A R +
Sbjct: 325 SIPDIAGRQKILEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRNKKV 384
Query: 261 VIHEDFMKAVRKL 273
V +EDF A K+
Sbjct: 385 VTNEDFEYARDKI 397
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 492 (178.3 bits), Expect = 1.6e-46, P = 1.6e-46
Identities = 115/297 (38%), Positives = 173/297 (58%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
+T + ALP E+ P + + V +S +GG + R+L E ++LPL + F
Sbjct: 469 VTVDDVYHALP-EIRPSAMREIFLEMPKVHWSDIGGQEELKRKLIEVVQLPLEASDSFKN 527
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
+G+ PKGVLLYGPPG KTL A+A+A+ NFL V I +KY+GES R IRE+F
Sbjct: 528 LGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERAIREIFRK 587
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
AR P IIF DEIDAI G R +G S+ L LLN++DG ++L V ++ ATN+
Sbjct: 588 ARAASPSIIFFDEIDAIAGDR--DGDSSTTAASNVLTSLLNEIDGVEELKGVVIVGATNK 645
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEIL-KIHAAGIAKHGE--IDYEAVVKLAEGF 237
P +DPALLRPGRLDR I + P+ +R++IL K + G+ +D + + +L +G
Sbjct: 646 PTEIDPALLRPGRLDRHIYVAPPDYDARLQILQKCSRKFNLQSGDESVDLQKLAELTDGC 705
Query: 238 NGADLRNVCTEAGMSAIRAERDY--VIHEDFMKAVRKLNEAKKLESSAHYNADFGKE 292
+GA++ +C EAG++AI ++ V ++ F A++ ++ E +Y F K+
Sbjct: 706 SGAEVTLLCQEAGLAAIMENKEATTVTNKHFEHALKGISRGITPEMLEYYEK-FSKK 761
Score = 488 (176.8 bits), Expect = 4.5e-46, P = 4.5e-46
Identities = 106/234 (45%), Positives = 153/234 (65%)
Query: 26 PGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARA 85
P ++Y VGGLS QI L+ +IELPL NP LF GI PP+G+LL+GPPGTGKT+L R
Sbjct: 223 PQQITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRC 282
Query: 86 IASNI-DANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSE 144
+A++I +A+ L + +I+ KY+GE+ IR++F A+ QP IIFMDEID+I R S+
Sbjct: 283 VANSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSRTSD 342
Query: 145 GTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 204
S + E R + +LL +DG G++ +I ATNRP+ +D AL RPGR D+++EI +P+
Sbjct: 343 D-SGETE-SRVVAQLLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPD 400
Query: 205 EQSRMEIL-KIHAAGIAKHGEIDYEAVVKLAE---GFNGADLRNVCTEAGMSAI 254
++R EIL K A ++ +I E + +A G+ GADL +C E+ M AI
Sbjct: 401 VEAREEILTKQFAKMNSEKCQITKEEIASIASKTHGYVGADLTALCRESVMKAI 454
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 494 (179.0 bits), Expect = 2.1e-46, P = 2.1e-46
Identities = 95/229 (41%), Positives = 149/229 (65%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V + +GG ++L+E+IE PL P+ F+R+GIKPPKG+LLYGPPG KTLLA+A+A+
Sbjct: 619 VFWGDIGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALAT 678
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 148
NF+ V ++ K++GES R +R++F AR + P I+F DEID + R EG+ A
Sbjct: 679 ESGLNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGLAISRSGEGSGA 738
Query: 149 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 208
++R + +LL ++DG L V +I ATNRPD++D A+LR GR+DR + I P+ +R
Sbjct: 739 ---VERVVSQLLTEMDGIQPLTNVTIIGATNRPDIIDKAILRAGRIDRILYISPPDLDAR 795
Query: 209 MEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAE 257
EI IH + +ID + L +G++GA++ ++C EA ++A++ +
Sbjct: 796 KEIFNIHLKKVPHSSDIDINQLSILTDGYSGAEVTSICREASIAAMKED 844
Score = 282 (104.3 bits), Expect = 3.8e-38, Sum P(2) = 3.8e-38
Identities = 56/138 (40%), Positives = 91/138 (65%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
N+++ ++GGL Q++++RE I+L +L G+KPPKG+LLYGPPGTGKTLLAR +A
Sbjct: 308 NLNFQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVA 367
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ +A + + I+DK+ G + + ++++F A P IIF+DE+DA+ +R E S
Sbjct: 368 TQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKR--EDNS 425
Query: 148 ADREIQRTLMELLNQLDG 165
++ E +R + LL +DG
Sbjct: 426 SEVE-KRIVGSLLTLMDG 442
Score = 165 (63.1 bits), Expect = 3.8e-38, Sum P(2) = 3.8e-38
Identities = 41/115 (35%), Positives = 60/115 (52%)
Query: 171 KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKH-GEIDYEA 229
KV +I TNRPD +D AL RPGR D +IEI +PN+Q R +IL I + I +
Sbjct: 468 KVIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEIAM 527
Query: 230 VVKLAEGFNGADLRNVCTEAGMSA---IRAERDYVIHEDFMKAVRKLNEAKKLES 281
+ GF GAD+ ++C EA + I+ E + ++ K E K+ E+
Sbjct: 528 IASKTHGFVGADIESLCKEASLKCFNRIKNENQKLFQSINIEKEEKGKEEKQEEN 582
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 492 (178.3 bits), Expect = 2.2e-46, P = 2.2e-46
Identities = 103/253 (40%), Positives = 153/253 (60%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
E +P+ E ++ Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+LLY
Sbjct: 187 EGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 246
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A + P IIF+D
Sbjct: 247 GPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 306
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPG 192
E+DAI +R E T + E +R + +LL +DG Q V ++ ATNRP+ +D AL R G
Sbjct: 307 ELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFG 363
Query: 193 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 252
R DR+I+I +P+ R+EIL+IH + ++D E + G GADL +C+EA +
Sbjct: 364 RFDREIDIGIPDSTGRLEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQ 423
Query: 253 AIRAERDYVIHED 265
AIR + + ED
Sbjct: 424 AIRKKMTLIDLED 436
Score = 490 (177.5 bits), Expect = 3.7e-46, P = 3.7e-46
Identities = 101/247 (40%), Positives = 151/247 (61%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
+V++ +GGL + REL+E ++ P+ P+ FL+ G+ P +GVL YGPPG GKTLLA+AIA
Sbjct: 475 HVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIA 534
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ ANF+ + ++ + GES +R++F AR PCI+F DE+D+I R
Sbjct: 535 NECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGD 594
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
A R + ++L ++DG V +I ATNRPD++DPA+LRPGRLD+ I IPLP+ S
Sbjct: 595 AGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPS 654
Query: 208 RMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHED 265
R IL+ + + +AK ++D + K+ EGF+GADL +C A AIR + I +
Sbjct: 655 RTAILRANLRKSPVAK--DVDLMYLSKITEGFSGADLTEICQRACKLAIREAIEAEIRAE 712
Query: 266 FMKAVRK 272
+ RK
Sbjct: 713 RQRQARK 719
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 104/254 (40%), Positives = 153/254 (60%)
Query: 21 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 80
++ + G V++ V G+ + EL E ++ L + + F ++G K PKG LL G PGTGKT
Sbjct: 147 LMTDSRGKVTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKT 205
Query: 81 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 140
LLARAIA + F + S ++ ++G A +R+MF + H PCIIF+DEIDA+G
Sbjct: 206 LLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRH 265
Query: 141 R-FSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIE 199
R G D E ++TL +LL ++DGF+ V +I ATNRPDVLDPALLRPGR DR++
Sbjct: 266 RGIGLGGGND-EREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVT 324
Query: 200 IPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERD 259
I +P+ R +I+ +HA + ++D + + GF+GADL N+ EA + A R ++
Sbjct: 325 ISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKK 384
Query: 260 YVIHEDFMKAVRKL 273
V DF A K+
Sbjct: 385 IVTMCDFEYARDKV 398
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 104/254 (40%), Positives = 153/254 (60%)
Query: 21 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 80
++ + G V++ V G+ + EL E ++ L + + F ++G K PKG LL G PGTGKT
Sbjct: 147 LMTDSRGKVTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKT 205
Query: 81 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 140
LLARAIA + F + S ++ ++G A +R+MF + H PCIIF+DEIDA+G
Sbjct: 206 LLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRH 265
Query: 141 R-FSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIE 199
R G D E ++TL +LL ++DGF+ V +I ATNRPDVLDPALLRPGR DR++
Sbjct: 266 RGIGLGGGND-EREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVT 324
Query: 200 IPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERD 259
I +P+ R +I+ +HA + ++D + + GF+GADL N+ EA + A R ++
Sbjct: 325 ISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKK 384
Query: 260 YVIHEDFMKAVRKL 273
V DF A K+
Sbjct: 385 IVTMCDFEYARDKV 398
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 478 (173.3 bits), Expect = 3.1e-46, Sum P(2) = 3.1e-46
Identities = 105/241 (43%), Positives = 153/241 (63%)
Query: 22 LHED--PGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGK 79
+ ED P N S ++GG+ D + +L E I LP+++PE+FL G++PP+GVLL+GPPG GK
Sbjct: 193 IKEDRSPPNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGK 252
Query: 80 TLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGG 139
T +A A+A + F+ + + +++ GES + IR++F AR PC++F DEIDAI
Sbjct: 253 TSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITP 312
Query: 140 RRFSEGTSADREIQRTLM-ELLNQLDGFDQL---GK-VKMIMATNRPDVLDPALLRPGRL 194
+R +G A RE++R ++ +LL +D GK V +I ATNRPD LD AL R GR
Sbjct: 313 KR--DG-GAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRF 369
Query: 195 DRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 254
DR+I + +PNE SR+ ILK + + G ID+ + KL GF GADL+ + T AG AI
Sbjct: 370 DREICLNVPNEVSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAI 429
Query: 255 R 255
+
Sbjct: 430 K 430
Score = 467 (169.5 bits), Expect = 1.5e-43, P = 1.5e-43
Identities = 100/253 (39%), Positives = 154/253 (60%)
Query: 7 MRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPP 66
++ALP + P +V+++ VG L EL +I P+ PEL+ +VGI P
Sbjct: 509 LKALPT-IQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAP 567
Query: 67 KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQP 126
GVLL+GPPG GKTLLA+A+A+ ANF+ + +++KY+GES R IR++F AR P
Sbjct: 568 GGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVP 627
Query: 127 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDP 186
C+IF DE+DA+ RR TS R + LL +LDG + + +I ATNRPD++DP
Sbjct: 628 CVIFFDELDALVPRR---DTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDP 684
Query: 187 ALLRPGRLDRKIEIPLPNEQSRMEILKI--HAAGIAKHGEIDYEAVVK--LAEGFNGADL 242
A+LRPGRLD+ + I LPN + +++I+K + G ++D+E +++ F+GADL
Sbjct: 685 AMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADL 744
Query: 243 RNVCTEAGMSAIR 255
+ E+ + A++
Sbjct: 745 AALVRESSVLALK 757
Score = 38 (18.4 bits), Expect = 3.1e-46, Sum P(2) = 3.1e-46
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 263 HEDFMKAVRKLNEAKKLESSA 283
+EDF+KA+ + K E A
Sbjct: 505 YEDFLKALPTIQPTAKREGFA 525
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 103/245 (42%), Positives = 149/245 (60%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V++ V G+ + EL+E ++ L +P+ F R+G K PKGVLL GPPGTGKTLLARA+A
Sbjct: 172 VTFDDVAGMENPKMELKEIVDY-LRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAG 230
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 148
D FL + +S I+ ++G A +R++F A+ P IIF+DE+DA+G R +
Sbjct: 231 EADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRSRGAGLGGG 290
Query: 149 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 208
E ++TL +LL+++DGFD +V ++ ATNRPDVLDPALLRPGR DR + I P+ + R
Sbjct: 291 HDEREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVVIDRPDWRDR 350
Query: 209 MEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMK 268
+IL +H I ++D + + G GADL N+ EA + A R V E +
Sbjct: 351 EKILHVHTRKIPLDKDVDLAVIARGTPGMAGADLENLVNEAAILAARENAATVTMEHMER 410
Query: 269 AVRKL 273
A K+
Sbjct: 411 AKDKV 415
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 489 (177.2 bits), Expect = 4.1e-46, P = 4.1e-46
Identities = 107/245 (43%), Positives = 152/245 (62%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V +S V G + EL+E +E L+NPE F +G K PKGVLL GPPGTGKTLLARA+A
Sbjct: 312 VRFSDVHGCDEAKDELQELVEF-LLNPERFSSLGGKLPKGVLLVGPPGTGKTLLARAVAG 370
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 148
F + S + Y+G A+ +RE+F AR P IIF+DE+DAIG +R +E +A
Sbjct: 371 EAGVPFFYMSGSEFDEVYVGVGAKRVRELFNQARSKSPAIIFIDELDAIGAKR-NERDAA 429
Query: 149 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 208
+++TL +LL +LDGF Q V ++ ATN P++LD AL RPGR DRK+ + LP+ + R
Sbjct: 430 --YVKQTLNQLLTELDGFSQSTGVIILAATNYPELLDKALTRPGRFDRKVVVDLPDVRGR 487
Query: 209 MEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMK 268
M+ILK H + ++D + + GF+GADL N+ +A + A R ++ V +DF
Sbjct: 488 MDILKHHMKNVQISTDVDVAVIARGTSGFSGADLENLVNQAAIFASRNKQSKVTPKDFDY 547
Query: 269 AVRKL 273
A K+
Sbjct: 548 AKDKI 552
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 103/260 (39%), Positives = 153/260 (58%)
Query: 21 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 80
+ +++ V + V G ++ +EL E +E L +P F VG + PKGVLL GPPGTGKT
Sbjct: 151 LYNDEKKKVRFRDVAGADEEKQELVEVVEF-LKDPRKFAEVGARIPKGVLLVGPPGTGKT 209
Query: 81 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 140
LLARA+A F + S ++ ++G A +R++F A+ + PCIIF+DEIDA+G +
Sbjct: 210 LLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQ 269
Query: 141 RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 200
R + E ++TL +LL ++DGF + +I ATNRPD+LDPALLRPGR DR+I +
Sbjct: 270 RGAGLGGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITV 329
Query: 201 PLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 260
P+ R +LK+HA I+ A+ GF+GADL N+ EA + A R ++
Sbjct: 330 DRPDVNGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKK 389
Query: 261 VIHEDFMKAVRKL--NEAKK 278
+ D +A ++ AKK
Sbjct: 390 IDMSDIDEATDRVIAGPAKK 409
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 475 (172.3 bits), Expect = 7.5e-46, Sum P(2) = 7.5e-46
Identities = 106/259 (40%), Positives = 154/259 (59%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
+T + ALP V P +V++ VG L EL I P+ PEL+L+
Sbjct: 492 ITYQDFVNALP-SVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYLK 550
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI P GVL++GPPG GKTLLA+A+A+ ANF+ + +++KY+GES + +R++F
Sbjct: 551 VGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQR 610
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
AR PCIIF DE+DA+ RR TS R + LL +LDG + V +I ATNR
Sbjct: 611 ARASTPCIIFFDELDALVPRR---DTSMSESSSRVVNTLLTELDGLNDRKGVFVIGATNR 667
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILK--IHAAGIAKHGEIDYEAVVKLAE--G 236
PD++DPA+LRPGRLD+ + I LP + R+EILK + + H +D A+ + +
Sbjct: 668 PDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNAISRDSRCGN 727
Query: 237 FNGADLRNVCTEAGMSAIR 255
F+GADL ++ EAG+ A++
Sbjct: 728 FSGADLSSLVKEAGVWALK 746
Score = 457 (165.9 bits), Expect = 7.5e-44, Sum P(2) = 7.5e-44
Identities = 99/235 (42%), Positives = 153/235 (65%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
N+ S++GG+ +L E I LP+++PE++ G++PP+GVLLYGPPG GKT +A A+A
Sbjct: 189 NIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALA 248
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ F+ + + +++ GES + +RE+F A+ PC+IFMDEIDAI +R +G
Sbjct: 249 GELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKR--DG-G 305
Query: 148 ADREIQRTLM-ELLNQLDGF--DQLG--KVKMIMATNRPDVLDPALLRPGRLDRKIEIPL 202
A RE+++ ++ +LL +D ++ G V +I ATNRPD LD AL R GR DR+I + +
Sbjct: 306 AQREMEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNV 365
Query: 203 PNEQSRMEILKIHAAGIA-KHGE-IDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
PNE+ R+ ILK I ++GE +Y + KL G+ GADL+++ T AG+SAI+
Sbjct: 366 PNEEQRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIK 420
Score = 37 (18.1 bits), Expect = 7.5e-46, Sum P(2) = 7.5e-46
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 8 RALPREVDPVVYNMLHE 24
R + +D +YN++H+
Sbjct: 5 RTVTGSLDQKIYNLIHD 21
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 475 (172.3 bits), Expect = 7.5e-46, Sum P(2) = 7.5e-46
Identities = 106/259 (40%), Positives = 154/259 (59%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
+T + ALP V P +V++ VG L EL I P+ PEL+L+
Sbjct: 492 ITYQDFVNALP-SVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYLK 550
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI P GVL++GPPG GKTLLA+A+A+ ANF+ + +++KY+GES + +R++F
Sbjct: 551 VGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQR 610
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
AR PCIIF DE+DA+ RR TS R + LL +LDG + V +I ATNR
Sbjct: 611 ARASTPCIIFFDELDALVPRR---DTSMSESSSRVVNTLLTELDGLNDRKGVFVIGATNR 667
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILK--IHAAGIAKHGEIDYEAVVKLAE--G 236
PD++DPA+LRPGRLD+ + I LP + R+EILK + + H +D A+ + +
Sbjct: 668 PDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNAISRDSRCGN 727
Query: 237 FNGADLRNVCTEAGMSAIR 255
F+GADL ++ EAG+ A++
Sbjct: 728 FSGADLSSLVKEAGVWALK 746
Score = 457 (165.9 bits), Expect = 7.5e-44, Sum P(2) = 7.5e-44
Identities = 99/235 (42%), Positives = 153/235 (65%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
N+ S++GG+ +L E I LP+++PE++ G++PP+GVLLYGPPG GKT +A A+A
Sbjct: 189 NIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALA 248
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ F+ + + +++ GES + +RE+F A+ PC+IFMDEIDAI +R +G
Sbjct: 249 GELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKR--DG-G 305
Query: 148 ADREIQRTLM-ELLNQLDGF--DQLG--KVKMIMATNRPDVLDPALLRPGRLDRKIEIPL 202
A RE+++ ++ +LL +D ++ G V +I ATNRPD LD AL R GR DR+I + +
Sbjct: 306 AQREMEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNV 365
Query: 203 PNEQSRMEILKIHAAGIA-KHGE-IDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
PNE+ R+ ILK I ++GE +Y + KL G+ GADL+++ T AG+SAI+
Sbjct: 366 PNEEQRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIK 420
Score = 37 (18.1 bits), Expect = 7.5e-46, Sum P(2) = 7.5e-46
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 8 RALPREVDPVVYNMLHE 24
R + +D +YN++H+
Sbjct: 5 RTVTGSLDQKIYNLIHD 21
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 486 (176.1 bits), Expect = 8.5e-46, P = 8.5e-46
Identities = 114/286 (39%), Positives = 162/286 (56%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
TL + + ++ P + + V +S +GG + +++E I+LPL E F R+G
Sbjct: 487 TLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLG 546
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I PKGVLLYGPPG KTL A+A+A+ NFL V I +KY+GES R IRE+F AR
Sbjct: 547 ISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKAR 606
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
P IIF DEIDA+ R TSA + L LLN++DG ++L V ++ ATNRPD
Sbjct: 607 SAAPSIIFFDEIDALSPDRDGSSTSAANHV---LTSLLNEIDGVEELKGVVIVAATNRPD 663
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGI-AKHGEIDYEAVVKLAEGFNGAD 241
+D ALLRPGRLDR I + P+ +R+EILK + +D + EG++GA+
Sbjct: 664 EIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAE 723
Query: 242 LRNVCTEAGMSAIRAERDYVIHE--DFMKAVRKLNEAKKLESSAHY 285
+ +C EAG++AI + D E F KA + + E ++Y
Sbjct: 724 VVLLCQEAGLAAIMEDLDVAKVELRHFEKAFKGIARGITPEMLSYY 769
Score = 484 (175.4 bits), Expect = 1.4e-45, P = 1.4e-45
Identities = 101/240 (42%), Positives = 153/240 (63%)
Query: 20 NMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGK 79
N + P +SY+AVGGL +I L+ +IE+PL P LF G+ PP+G+LL+GPPGTGK
Sbjct: 233 NRKYNLPEPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGK 292
Query: 80 TLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGG 139
T+L R +A+ +A+ L + +I+ KY+GE+ +R++F AR +QP IIF+DEID+I
Sbjct: 293 TMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAP 352
Query: 140 RRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIE 199
R ++ S + E R + LL +DG GKV +I ATNRP+ +DPAL RPGR D+++E
Sbjct: 353 NRANDD-SGEVE-SRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVE 410
Query: 200 IPLPNEQSRMEILKIHAAGIAKHGEI-DYEAVVKLAE---GFNGADLRNVCTEAGMSAIR 255
I +P+ +R +IL + ++ + D EA+ +A G+ GADL +C E+ M I+
Sbjct: 411 IGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQ 470
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 484 (175.4 bits), Expect = 1.2e-45, P = 1.2e-45
Identities = 101/241 (41%), Positives = 144/241 (59%)
Query: 22 LHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTL 81
L +D +++ V G+ + + EL E + L NP + +G K PKGVLLYGPPGTGKTL
Sbjct: 153 LSKDMPKTTFADVAGVDEAVEELYEIKDF-LQNPSRYQALGAKIPKGVLLYGPPGTGKTL 211
Query: 82 LARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRR 141
LARA+A F + S ++ ++G A +R++F A+ + PCIIF+DEIDA+G +R
Sbjct: 212 LARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQR 271
Query: 142 FSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIP 201
+ E ++TL +LL ++DGF V +I ATNRPD+LDPALLRPGR DR+I +
Sbjct: 272 GAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVS 331
Query: 202 LPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYV 261
P+ R +L++H+ G + D + + K G GADL NV EA + R E V
Sbjct: 332 NPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTAR-ENGTV 390
Query: 262 I 262
I
Sbjct: 391 I 391
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 482 (174.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 113/276 (40%), Positives = 162/276 (58%)
Query: 12 REVDPV-VYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVL 70
+ + P + + E P NVS++ +GG + E+++++ P +PE F R GI PP G+L
Sbjct: 439 KRIRPTGIRQFILEVP-NVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGIL 497
Query: 71 LYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIF 130
LYGPPG KTL+ARA+AS NFL V + K++G+S + IR++F AR P I+F
Sbjct: 498 LYGPPGCSKTLIARALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVF 557
Query: 131 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLR 190
DEIDA+G R SE +S + R L +LL +LDG ++ +V ++ ATNRPD LD ALLR
Sbjct: 558 FDEIDAVGSSRGSEKSSGVSD--RVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLR 615
Query: 191 PGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEI-DYEAVVKLAEGFNGADLRNVCTEA 249
PGRLDR I + LP E +R IL++ + + + +V+ G++GA+L VC A
Sbjct: 616 PGRLDRAIYVGLPCEVTRRAILEMRTKKMKFDDTVRTIDKLVEKTSGYSGAELVAVCRTA 675
Query: 250 GMSAIRAERDYVI----H-EDFMKAVRKLNEAKKLE 280
M A+R D I H E + AV EA LE
Sbjct: 676 AMFAMRESIDATIVQWTHFEQALAAVVSRTEAYLLE 711
>UNIPROTKB|J3QQM1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AC015651 ChiTaRS:PSMC5
HGNC:HGNC:9552 Ensembl:ENST00000582130 Uniprot:J3QQM1
Length = 263
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 90/161 (55%), Positives = 120/161 (74%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +GI
Sbjct: 103 TLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIA 162
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR+H
Sbjct: 163 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREH 222
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDG 165
P IIFMDEID+IG R G+ D E+QRT++ELLNQLDG
Sbjct: 223 APSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDG 263
>CGD|CAL0002985 [details] [associations]
symbol:orf19.3949 species:5476 "Candida albicans" [GO:0042406
"extrinsic to endoplasmic reticulum membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0031936
"negative regulation of chromatin silencing" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 CGD:CAL0002985
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721858.1 RefSeq:XP_722018.1 ProteinModelPortal:Q5AK72
STRING:Q5AK72 GeneID:3636302 GeneID:3636397 KEGG:cal:CaO19.11431
KEGG:cal:CaO19.3949 Uniprot:Q5AK72
Length = 1314
Score = 490 (177.5 bits), Expect = 1.7e-45, P = 1.7e-45
Identities = 105/239 (43%), Positives = 150/239 (62%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
N+ +S VGGL + I +L+E + LPL+ PEL+ I PP+GVL +GPPGTGKTL+ARA+A
Sbjct: 396 NIDFSVVGGLDNYINQLKEMVALPLLYPELYQNFAITPPRGVLFHGPPGTGKTLMARALA 455
Query: 88 SNIDANFLKVV-----SSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRF 142
++ + K+ + + K++GE+ R +R +F A++ QP IIF DEID + R
Sbjct: 456 ASCSTSERKITFFMRKGADCLSKWVGEAERQLRLLFEEAKNQQPSIIFFDEIDGLAPVRS 515
Query: 143 SEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPL 202
S+ I TL+ L+ DG D G+V +I ATNRPD +DPAL RPGR DR+ PL
Sbjct: 516 SKQEQIHASIVSTLLALM---DGMDNRGQVIVIGATNRPDAIDPALRRPGRFDREFYFPL 572
Query: 203 PNEQSRMEILKIHAAGIAKH-GEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 260
P+ SR EILKIH ++ E + +L +G+ GADLR +CTEA +++I +R Y
Sbjct: 573 PDLGSRKEILKIHTRKWNPELPDLFLERLAQLTKGYGGADLRALCTEAALNSI--QRKY 629
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 99/253 (39%), Positives = 153/253 (60%)
Query: 21 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 80
M+ ED ++S V G + +++E ++ L +P F ++G K P GVL+ GPPGTGKT
Sbjct: 145 MMSEDQIKTTFSDVAGCDEAKEDVKELVDY-LRDPSRFQKLGGKIPTGVLMVGPPGTGKT 203
Query: 81 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 140
LLA+AIA F + S ++ ++G A +R+MF A+ PCIIF+DEIDA+G +
Sbjct: 204 LLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQ 263
Query: 141 RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 200
R + E ++TL ++L ++DGF+ + +I ATNRPDVLDPALLRPGR DR++ +
Sbjct: 264 RGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVV 323
Query: 201 PLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 260
LP+ + R +ILK+H + +++ + + GF+GADL N+ EA + A R +
Sbjct: 324 GLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRN 383
Query: 261 VIHEDFMKAVRKL 273
V +F A K+
Sbjct: 384 VSMVEFELAKDKI 396
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 99/253 (39%), Positives = 153/253 (60%)
Query: 21 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 80
M+ ED ++S V G + +++E ++ L +P F ++G K P GVL+ GPPGTGKT
Sbjct: 145 MMSEDQIKTTFSDVAGCDEAKEDVKELVDY-LRDPSRFQKLGGKIPTGVLMVGPPGTGKT 203
Query: 81 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 140
LLA+AIA F + S ++ ++G A +R+MF A+ PCIIF+DEIDA+G +
Sbjct: 204 LLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQ 263
Query: 141 RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 200
R + E ++TL ++L ++DGF+ + +I ATNRPDVLDPALLRPGR DR++ +
Sbjct: 264 RGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVV 323
Query: 201 PLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 260
LP+ + R +ILK+H + +++ + + GF+GADL N+ EA + A R +
Sbjct: 324 GLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRN 383
Query: 261 VIHEDFMKAVRKL 273
V +F A K+
Sbjct: 384 VSMVEFELAKDKI 396
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 484 (175.4 bits), Expect = 2.4e-45, P = 2.4e-45
Identities = 110/276 (39%), Positives = 157/276 (56%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
NV++ VG LS EL SI P+ P+ + +GI P GVL+YGPPG GKTLLA+AIA
Sbjct: 562 NVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIA 621
Query: 88 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
S ANF+ V +++KY+GES R +R++F A PC+IF DE DA+ +R
Sbjct: 622 SECQANFISVKGPELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDALAPKRGGGDGG 681
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
++ +R + +LL ++DG ++ +V +I ATNRPD++D A+ RPGRLD+ + +PLP+ +
Sbjct: 682 GNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEE 741
Query: 208 RMEILKIHAAGIAKHGEIDYEAV-VKL-AEGFNGADLRNVCTEAGMSAIR-------AER 258
R EILK I H ++D V L F+GADL + EA AI E
Sbjct: 742 RCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFSGADLSLLVKEAANHAISRGFDNNSTEP 801
Query: 259 DYVIHEDFMKAVRKLNEAKKLESSAHY---NADFGK 291
D V EDF+ A+ K+ + + Y N D K
Sbjct: 802 DTVTMEDFIFALSKIKPSVSRKDELMYDKLNNDINK 837
Score = 288 (106.4 bits), Expect = 6.6e-39, Sum P(3) = 6.6e-39
Identities = 60/154 (38%), Positives = 94/154 (61%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
+++S +GG+ +R++RE IE P+ +PE++ +G++PP+G+LL+GP G GKTLLA+AIA
Sbjct: 213 INFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAG 272
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 148
+ + ++ I GES +R +F A PCIIF+DEIDAI +R E S
Sbjct: 273 ELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKR--ESASK 330
Query: 149 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
D E +R + +LL +D + L +TN P+
Sbjct: 331 DME-RRIVSQLLTCMDSLNYLSSNN---STNEPN 360
Score = 147 (56.8 bits), Expect = 6.6e-39, Sum P(3) = 6.6e-39
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 170 GKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEA 229
G V +I ATNRP+ LD AL GR D++I + +P++ +R +ILK+ + + DYE
Sbjct: 401 GHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLENNFDYEE 460
Query: 230 VVKLAEGFNGADLRNVCTEAGMSAI 254
+ L G+ GAD+ + EA +++
Sbjct: 461 IATLTPGYVGADINLLVKEAATNSV 485
Score = 40 (19.1 bits), Expect = 6.6e-39, Sum P(3) = 6.6e-39
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 260 YVIHEDFMKAVRKLNEAKKLESSA 283
Y+ DF KA++K+ A K E A
Sbjct: 535 YIEMIDFKKALKKVVPAAKREGFA 558
>POMBASE|SPBP22H7.05c [details] [associations]
symbol:abo2 "ATPase with bromodomain protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=ISM] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBP22H7.05c GO:GO:0005524 EMBL:CU329671
GO:GO:0045944 GO:GO:0016887 GO:GO:0006338 GO:GO:0000790 HSSP:Q01853
eggNOG:COG0464 EMBL:AB004535 RefSeq:NP_595602.1
ProteinModelPortal:Q9C0W2 EnsemblFungi:SPBP22H7.05c.1
GeneID:2541287 KEGG:spo:SPBP22H7.05c OrthoDB:EOG4N07QZ
NextBio:20802398 Uniprot:Q9C0W2
Length = 1201
Score = 487 (176.5 bits), Expect = 3.0e-45, P = 3.0e-45
Identities = 106/236 (44%), Positives = 153/236 (64%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
N+ ++++GGL D I +L+E + LPL+ PE+FL + I PP+GVL +GPPGTGKTL+AR +A
Sbjct: 368 NLDFNSIGGLEDIILQLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLA 427
Query: 88 SNIDANFLKVV-----SSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRF 142
+N K+ S + K++GE+ R +R +F AR QP IIF DEID + R
Sbjct: 428 ANCSTKNQKISFFLRKGSDCLSKWVGEAERQLRLLFEEARRVQPSIIFFDEIDGLAPIRS 487
Query: 143 SEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPL 202
S+ I TL+ L+ DG D G+V +I ATNRP+ LDPAL RPGR DR+ PL
Sbjct: 488 SKQEQTHSSIVSTLLALM---DGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPL 544
Query: 203 PNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE---GFNGADLRNVCTEAGMSAIR 255
PN+Q+RM+IL+I++ + +I ++ LAE G+ GADL+ +CTEA ++A+R
Sbjct: 545 PNKQARMKILEINSLHFSP--KIPESYLLHLAESTSGYGGADLKALCTEAALNAVR 598
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 95/233 (40%), Positives = 143/233 (61%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V + V G+ + EL+E + L PE F VG K PKGVLL GPPGTGKTLLA+AIA
Sbjct: 169 VMFDDVAGIDEAKEELQEVVTF-LKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 227
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 148
F + S ++ ++G A +R++F A+++ PC+IF+DEIDA+G +R +
Sbjct: 228 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGG 287
Query: 149 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 208
+ E ++TL +LL ++DGF+ + +I ATNRPDVLD AL+RPGR DR++ + P+ R
Sbjct: 288 NDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGR 347
Query: 209 MEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYV 261
EIL++HA E+ +++ + GF+GADL N+ EA + R + +
Sbjct: 348 KEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAI 400
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 467 (169.5 bits), Expect = 3.6e-45, Sum P(2) = 3.6e-45
Identities = 98/251 (39%), Positives = 150/251 (59%)
Query: 25 DPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLAR 84
D ++++ V G+ + EL E +E L NP+ ++R+G +PP+GVLL G PGTGKTLLA+
Sbjct: 322 DGETITFADVAGVDEAKEELEEIVEF-LKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAK 380
Query: 85 AIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSE 144
A+A D F+ +S ++ Y+G A +R++F A+ P IIF+DEIDA+ R +
Sbjct: 381 AVAGESDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGK 440
Query: 145 GTSADR-EIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 203
E ++TL +LL ++DGFD V ++ ATNR DVLDPAL RPGR DR + + P
Sbjct: 441 FRMVSNDEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESP 500
Query: 204 NEQSRMEILKIHAAG--IAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYV 261
++ R ILK+H + + +++ ++ + GF GADL N+ EA + A R + V
Sbjct: 501 DKVGRESILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKMTV 560
Query: 262 IHEDFMKAVRK 272
DF+ AV +
Sbjct: 561 DKIDFIHAVER 571
Score = 38 (18.4 bits), Expect = 3.6e-45, Sum P(2) = 3.6e-45
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 17 VVYNMLHEDPGNVSYSAVGGL 37
V+ +LH P N S S G L
Sbjct: 286 VLAGLLHRFPVNFSQSTTGQL 306
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 486 (176.1 bits), Expect = 4.0e-45, P = 4.0e-45
Identities = 102/267 (38%), Positives = 163/267 (61%)
Query: 24 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 83
E+ +++Y +GG+ Q+ ++RE IELPL PE+F+ +GI PKGVL++G PGTGKT +A
Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578
Query: 84 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 143
+AIA+ +A + I+ K+IGES + +R++F A + PCIIF+DEID+I +R
Sbjct: 579 KAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSK 638
Query: 144 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 203
++ R + +LL +DG + V ++ ATNRP+ +DPAL R GR DR+IEIP+P
Sbjct: 639 SNNELEK---RVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVP 695
Query: 204 NEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVI- 262
+EQ R EIL + +++ + K G+ GADL +C EA + I+ ++
Sbjct: 696 DEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDL 755
Query: 263 -HEDFMKAVR-KLNEAKKLESSAHYNA 287
EDF++ ++ ++E KK + Y +
Sbjct: 756 DEEDFIEFMKISVDEDKKNMGNEPYGS 782
Score = 445 (161.7 bits), Expect = 9.7e-41, P = 9.7e-41
Identities = 99/260 (38%), Positives = 153/260 (58%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V+++ +GG+++ +L+E+I PL L+ + KG+LLYGPPG GKTLLA+AIA+
Sbjct: 931 VTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN 990
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 148
ANF+ V ++ + GES +R++F AR PCIIF DEID++ R S T+
Sbjct: 991 ECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSN-TNN 1049
Query: 149 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 208
D R + ++L ++DG ++ + +I ATNRPD+LD AL RPGRLD+ I I LP+ +SR
Sbjct: 1050 DAS-DRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSR 1108
Query: 209 MEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYV-IHEDFM 267
I K + ++D + K EGF+GAD+ N+C A AI+ + I +
Sbjct: 1109 YSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQ 1168
Query: 268 KAVRKLNEAK-KLESSAHYN 286
+ RK N+ K++ + Y+
Sbjct: 1169 EEQRKKNKNSFKIDDTDTYD 1188
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 486 (176.1 bits), Expect = 4.0e-45, P = 4.0e-45
Identities = 102/267 (38%), Positives = 163/267 (61%)
Query: 24 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 83
E+ +++Y +GG+ Q+ ++RE IELPL PE+F+ +GI PKGVL++G PGTGKT +A
Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578
Query: 84 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 143
+AIA+ +A + I+ K+IGES + +R++F A + PCIIF+DEID+I +R
Sbjct: 579 KAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSK 638
Query: 144 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 203
++ R + +LL +DG + V ++ ATNRP+ +DPAL R GR DR+IEIP+P
Sbjct: 639 SNNELEK---RVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVP 695
Query: 204 NEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVI- 262
+EQ R EIL + +++ + K G+ GADL +C EA + I+ ++
Sbjct: 696 DEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDL 755
Query: 263 -HEDFMKAVR-KLNEAKKLESSAHYNA 287
EDF++ ++ ++E KK + Y +
Sbjct: 756 DEEDFIEFMKISVDEDKKNMGNEPYGS 782
Score = 445 (161.7 bits), Expect = 9.7e-41, P = 9.7e-41
Identities = 99/260 (38%), Positives = 153/260 (58%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V+++ +GG+++ +L+E+I PL L+ + KG+LLYGPPG GKTLLA+AIA+
Sbjct: 931 VTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN 990
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 148
ANF+ V ++ + GES +R++F AR PCIIF DEID++ R S T+
Sbjct: 991 ECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSN-TNN 1049
Query: 149 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 208
D R + ++L ++DG ++ + +I ATNRPD+LD AL RPGRLD+ I I LP+ +SR
Sbjct: 1050 DAS-DRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSR 1108
Query: 209 MEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYV-IHEDFM 267
I K + ++D + K EGF+GAD+ N+C A AI+ + I +
Sbjct: 1109 YSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQ 1168
Query: 268 KAVRKLNEAK-KLESSAHYN 286
+ RK N+ K++ + Y+
Sbjct: 1169 EEQRKKNKNSFKIDDTDTYD 1188
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 479 (173.7 bits), Expect = 4.7e-45, P = 4.7e-45
Identities = 106/264 (40%), Positives = 153/264 (57%)
Query: 23 HEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLL 82
HE + ++ V G+ + E+ E ++ L NP+ + R+G K P+G +L GPPGTGKTLL
Sbjct: 287 HETDIKIKFADVAGVDEAKEEIMEFVKF-LKNPKFYERLGAKIPRGAILSGPPGTGKTLL 345
Query: 83 ARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIG---G 139
A+A A + FL V S ++ ++G +R++F AR + PCIIF+DEIDAIG G
Sbjct: 346 AKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARG 405
Query: 140 RRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIE 199
R G++ +RE TL +LL ++DGF + + TNRPDVLDPALLRPGR DR+I
Sbjct: 406 RGGQFGSNDERE--STLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQIT 463
Query: 200 IPLPNEQSRMEILKIHAAGIAKHGEIDYEA--VVKLAEGFNGADLRNVCTEAGMSAIRAE 257
I P+ R +I K+H I ID A + L GF GAD+ NVC E + A R+
Sbjct: 464 IDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALIAARSN 523
Query: 258 RDYVIHEDFMKAVRKLNEAKKLES 281
+ V F +A+ ++ + +S
Sbjct: 524 SNEVQMVHFEQAIERVTAGLEKKS 547
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 478 (173.3 bits), Expect = 6.1e-45, P = 6.1e-45
Identities = 99/230 (43%), Positives = 149/230 (64%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V+Y +GGL+ Q++E+RE IELPL PELF GI PP+GVLLYGPPGTGKT++ARA+A+
Sbjct: 341 VTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 400
Query: 89 NIDANFLKVVSSA-IIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ A ++ V++ II K+ GE+ +R++F A P IIF+DE+DA+ +R
Sbjct: 401 EVGA-YVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNE 459
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
++ + +L+ L++ + G+V ++ ATNRP LD AL RPGR D++IEI +PN Q
Sbjct: 460 VEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQD 519
Query: 208 RMEILKIHAAGIAKH--GEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
R++IL+ + H E + + A G+ GADL+ +C EAG+ A+R
Sbjct: 520 RLDILQKLLRRVP-HLLTEAELLQLANSAHGYVGADLKALCNEAGLHALR 568
Score = 382 (139.5 bits), Expect = 1.9e-34, P = 1.9e-34
Identities = 76/173 (43%), Positives = 113/173 (65%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
++ P + D NVS+S +GGL + +L++++E PL +PE F ++GI+PPKGVLLY
Sbjct: 599 DIRPSAMREVAVDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLY 658
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPG KT++A+A+A+ NFL + +++KY+GES R +RE+F AR P IIF D
Sbjct: 659 GPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFD 718
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
E+DA+ R S + A R L +LL ++DG +QL V ++ ATNRPD +D
Sbjct: 719 ELDALAVERGSS-SGAGNVADRVLAQLLTEMDGIEQLKNVTILAATNRPDRID 770
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 478 (173.3 bits), Expect = 6.4e-45, P = 6.4e-45
Identities = 99/230 (43%), Positives = 149/230 (64%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V+Y +GGL+ Q++E+RE IELPL PELF GI PP+GVLLYGPPGTGKT++ARA+A+
Sbjct: 344 VTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVAN 403
Query: 89 NIDANFLKVVSSA-IIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 147
+ A ++ V++ II K+ GE+ +R++F A P IIF+DE+DA+ +R
Sbjct: 404 EVGA-YVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNE 462
Query: 148 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 207
++ + +L+ L++ + G+V ++ ATNRP LD AL RPGR D++IEI +PN Q
Sbjct: 463 VEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQD 522
Query: 208 RMEILKIHAAGIAKH--GEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
R++IL+ + H E + + A G+ GADL+ +C EAG+ A+R
Sbjct: 523 RLDILQKLLRRVP-HLLTEAELLQLANSAHGYVGADLKALCNEAGLYALR 571
Score = 390 (142.3 bits), Expect = 2.6e-35, P = 2.6e-35
Identities = 79/178 (44%), Positives = 116/178 (65%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
++ P + D NVS+S +GGL + +L++++E PL +PE F ++GI+PPKGVLLY
Sbjct: 602 DIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLY 661
Query: 73 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 132
GPPG KT++A+A+A+ NFL + +++KY+GES R +RE+F AR P IIF D
Sbjct: 662 GPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFD 721
Query: 133 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLR 190
E+DA+ R S + A R L +LL ++DG +QL V ++ ATNRPD +D LLR
Sbjct: 722 ELDALAVERGSS-SGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKELLR 778
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 478 (173.3 bits), Expect = 6.4e-45, P = 6.4e-45
Identities = 106/266 (39%), Positives = 156/266 (58%)
Query: 26 PGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARA 85
PG VS++ +G L EL+ +I P+ PEL+ VGI P GVLL+GPPG GKTLLA+A
Sbjct: 487 PG-VSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKA 545
Query: 86 IASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEG 145
+A+ ANF+ + +++KY+GES R +R++F AR PC+IF DE+DA+ RR
Sbjct: 546 VANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSL 605
Query: 146 TSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNE 205
+ A + TL L +LDG V +I ATNRPD++DPA+LRPGRLD+ + + LP+
Sbjct: 606 SEASSRVVNTL---LTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDA 662
Query: 206 QSRMEILKIHAAGIAKHGEIDYEAVVK--LAEGFNGADLRNVCTEAGMSAIRAERDYVIH 263
R+EILK H E++ + + + F+GADL + EA ++A+R+ +
Sbjct: 663 HERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALRS----AVF 718
Query: 264 EDFMKAVRKLNEAKKLESSAHYNADF 289
D ++ + LE NADF
Sbjct: 719 ADIASNEPEITQHSALEPIRVTNADF 744
Score = 463 (168.0 bits), Expect = 2.9e-43, P = 2.9e-43
Identities = 95/234 (40%), Positives = 149/234 (63%)
Query: 24 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 83
E P ++S S +GGL D I EL E + +P+ +PE++ GI PP+GVLL+GPPG GKT+LA
Sbjct: 166 EPPSDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLA 225
Query: 84 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 143
A+A+ + F+ + + +I+ GES + +RE+F A+ PC++F+DEIDA+ +R S
Sbjct: 226 NALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRES 285
Query: 144 EGTSADREIQRTLMELLNQLDGFDQL-GK-VKMIMATNRPDVLDPALLRPGRLDRKIEIP 201
+R I + +++L F++ GK V +I ATNRPD LD AL R GR DR+I +
Sbjct: 286 AQREMERRIVAQFLTCMDELS-FEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLT 344
Query: 202 LPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 255
+P++ +R +IL+ A G+ G+ D+ + K G+ GADL+ + AG+ AI+
Sbjct: 345 VPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIK 398
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 478 (173.3 bits), Expect = 8.8e-45, P = 8.8e-45
Identities = 96/248 (38%), Positives = 147/248 (59%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V + V G + E+ E + L NP+ ++ +G K PKG +L GPPGTGKTLLA+A A
Sbjct: 325 VGFKDVAGCEEAKIEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 383
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 148
+ F+ V S ++ ++G +R+MF AR H PCI+F+DEIDA+G +R +
Sbjct: 384 EANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGG 443
Query: 149 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 208
E + TL +LL ++DGF+ V ++ ATNR D+LD AL+RPGR DR+I +P P+ + R
Sbjct: 444 HSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGR 503
Query: 209 MEILKIHAAGIAKH---GEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHED 265
I K+H + E+ + + L GF GAD+ NVC EA + A R +D ++ +
Sbjct: 504 ASIFKVHLGNLKTSLDKNELSRK-MAALTPGFTGADIANVCNEAALIAARDSKDSIVLKH 562
Query: 266 FMKAVRKL 273
F +A+ ++
Sbjct: 563 FEQAIERV 570
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 98/253 (38%), Positives = 153/253 (60%)
Query: 21 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 80
++ ED +++ V G + E++E ++ L +P F ++G + P GVL+ GPPGTGKT
Sbjct: 146 LMSEDQIKTTFADVAGCDEAKEEVKELVDY-LRDPTKFQKLGGRIPTGVLMVGPPGTGKT 204
Query: 81 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 140
LLA+AIA F + S ++ ++G A +R+MF A+ PCIIF+DEIDA+G +
Sbjct: 205 LLAKAIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEIDAVGRQ 264
Query: 141 RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 200
R + E ++TL ++L ++DGF+ + +I ATNRPDVLD ALLRPGR DR++ +
Sbjct: 265 RGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFDRQVVV 324
Query: 201 PLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 260
LP+ + R +ILK+H + ++ + + GF+GADL N+ EA + A R R
Sbjct: 325 GLPDVRGREQILKVHMRKVPLSEDVKASVIARGTPGFSGADLANLVNEAALFAARGNRRV 384
Query: 261 VIHEDFMKAVRKL 273
V E+F +A K+
Sbjct: 385 VGMEEFERAKDKI 397
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 477 (173.0 bits), Expect = 9.6e-45, P = 9.6e-45
Identities = 99/253 (39%), Positives = 149/253 (58%)
Query: 25 DPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLAR 84
D +V + V G + E+ E + L NP+ + +G K PKG +L GPPGTGKTLLA+
Sbjct: 296 DEIDVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAK 354
Query: 85 AIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSE 144
A A + F+ V S ++ ++G +R++F AR + PCI+F+DEIDA+G +R
Sbjct: 355 ATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVGRKRGRG 414
Query: 145 GTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 204
E + TL +LL ++DGF+ V ++ TNRPD+LDPAL+RPGR DR+I I P+
Sbjct: 415 NFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQIYIGPPD 474
Query: 205 EQSRMEILKIHAAGIAKHGEIDYEAVVK----LAEGFNGADLRNVCTEAGMSAIRAERDY 260
+ R I K+H + E+D EA+ + L GF+GAD+ NVC EA + A R D
Sbjct: 475 IKGRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIANVCNEAALIAARHLSDA 534
Query: 261 VIHEDFMKAVRKL 273
+ + F +A+ ++
Sbjct: 535 INQKHFEQAIERV 547
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 479 (173.7 bits), Expect = 1.1e-44, P = 1.1e-44
Identities = 106/254 (41%), Positives = 158/254 (62%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
V ++ V G+ + + EL+E ++ L NP+LF ++GIKPP GVLL GPPG GKTL+A+AIA
Sbjct: 427 VKFADVAGIDEAVDELQELVKY-LKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAG 485
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRR---FSEG 145
F ++ S ++ +G + IR++F A+ ++P +IF+DEIDA+ RR F E
Sbjct: 486 EAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKEN 545
Query: 146 T-----SADREIQRTLMELLNQLDGFDQLGK-VKMIMATNRPDVLDPALLRPGRLDRKIE 199
+ +A +E + TL +LL +LDGFD GK V + ATNR D+LDPALLRPGR DRKI
Sbjct: 546 SDQLYNAATQERETTLNQLLIELDGFDT-GKGVIFLGATNRRDLLDPALLRPGRFDRKIR 604
Query: 200 IPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERD 259
+ PN + R++ILKIHA+ + +D + G++GA L + EA + A+R +
Sbjct: 605 VRPPNAKGRLDILKIHASKVKMSDSVDLSSYASNLPGWSGAKLAQLVQEAALVAVRKTHN 664
Query: 260 YVIHEDFMKAVRKL 273
++ D AV +L
Sbjct: 665 SILQSDMDDAVDRL 678
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 474 (171.9 bits), Expect = 1.6e-44, P = 1.6e-44
Identities = 108/277 (38%), Positives = 165/277 (59%)
Query: 19 YNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTG 78
Y+ ++ P S+ V G+ + EL E ++ L++P + +G K PKGVLL G PGTG
Sbjct: 289 YDETNQTP--TSFDDVKGIQEVKEELEEIVDY-LLHPTKYNSIGAKLPKGVLLSGEPGTG 345
Query: 79 KTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIG 138
KTLLARAIA +FL S+ +KY+G +R +RE+F AR+ QPCIIF+DEIDA+G
Sbjct: 346 KTLLARAIAGEAGVSFLYTTGSSFDEKYVGVGSRRVRELFNAAREKQPCIIFIDEIDAVG 405
Query: 139 GRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKI 198
R T+ E TL++LL ++DGF+ ++ +I ATN P+ LDPALLRPGR DR I
Sbjct: 406 KSR---NTAHHNE---TLLQLLTEMDGFEGNSQIMIIGATNAPNSLDPALLRPGRFDRHI 459
Query: 199 EIPLPNEQSRMEILKIHAAGIAKHG-EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAE 257
+P+P+ + R EI+ H KH E+ + + + GF GADL N+ A + A++
Sbjct: 460 SVPIPDMKGRSEIID-HYLKKVKHTVEVKADTIARATPGFTGADLSNLINTAAIKAVQNG 518
Query: 258 RDYVIHEDFMKAVRKLNEAKK--LESSAHYNADFGKE 292
++ + +++++++A+ L A NA +E
Sbjct: 519 KETI-------SIKQIDDARDDILMGRARLNAVMSEE 548
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 476 (172.6 bits), Expect = 1.8e-44, P = 1.8e-44
Identities = 101/245 (41%), Positives = 152/245 (62%)
Query: 28 NVSYSAVGGLSDQIR-ELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAI 86
+V ++ V GL +IR EL E ++ + E++ R G+K P G+LL GPPG GKTLLA+A+
Sbjct: 406 DVKFTDVAGLG-KIRLELEEIVKF-FTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAV 463
Query: 87 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 146
A NF + +S ++ Y+G A +R ++ AR++ P ++F+DE+DA+G R
Sbjct: 464 AGEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRERGLIKG 523
Query: 147 SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 206
S +E TL +LL LDGF+ G+V I +TNRPD+LDPAL+RPGR DRKI IP P
Sbjct: 524 SGGQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLI 583
Query: 207 SRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDF 266
RMEIL++HA ++DY AV + +G GA+L N+ A ++ +R R + +D
Sbjct: 584 GRMEILQVHARKKPMAEDLDYMAVASMTDGMVGAELANIVEIAAINMMRDGRTELTTDDL 643
Query: 267 MKAVR 271
++A +
Sbjct: 644 LQAAQ 648
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 471 (170.9 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 102/257 (39%), Positives = 154/257 (59%)
Query: 4 LTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGI 63
LT++R L R V G+V+ VG ++ + L E++ PL +P+ F R+G+
Sbjct: 442 LTVIRPLSRSASDEV------TVGDVTLDDVGDMAAAKQALTEAVLWPLQHPDTFARLGV 495
Query: 64 KPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARD 123
+PP+GVLLYGPPG GKT + RA+AS + V S ++DK++G S + +RE+F ARD
Sbjct: 496 EPPRGVLLYGPPGCGKTFVVRALASTGQLSVHAVKGSELMDKWVGSSEKAVRELFRRARD 555
Query: 124 HQPCIIFMDEIDAIGGRRFSEGTSADREIQ-RTLMELLNQLDGFDQLGKVKMIMATNRPD 182
P ++F+DE+DA+ RR G S D + R + LL +LDG D L V M+ ATNRPD
Sbjct: 556 SAPSLVFLDELDALAPRR---GQSFDSGVSDRVVAALLTELDGIDPLRDVVMLGATNRPD 612
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADL 242
++DPALLRPGRL+R + + P+ +R EIL+ I ++D + V +G++ AD
Sbjct: 613 LIDPALLRPGRLERLVFVEPPDAAARREILRTAGKSIPLSSDVDLDEVAAGLDGYSAADC 672
Query: 243 RNVCTEAGMSAIRAERD 259
+ EA ++A+R D
Sbjct: 673 VALLREAALTAMRRSID 689
Score = 164 (62.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 63/235 (26%), Positives = 104/235 (44%)
Query: 36 GLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFL 95
G Q +L E ++L L P L +G GVL+ GP G GK L RA+ D L
Sbjct: 217 GAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAGVGKATLVRAVC---DGRRL 273
Query: 96 KVVSSAIIDKYI-GESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQR 154
+ I G+ + + R H+ ++ + + DA+ A E
Sbjct: 274 VTLDGPEIGALAAGDRVKAVASAVQAVR-HEGGVLLITDADAL--------LPAAAEPVA 324
Query: 155 TLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKI 214
+L +L++L V +I + RPD LD L P DR++ +PLP+ +R +L+
Sbjct: 325 SL--ILSELRTAVATAGVVLIATSARPDQLDARLRSPELCDRELGLPLPDAATRKSLLEA 382
Query: 215 HAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGM-SAIRAERDY---VIHED 265
+ G+++ + + GF ADL + EA + +A RA D ++H+D
Sbjct: 383 LLNPVPT-GDLNLDEIASRTPGFVVADLAALVREAALRAASRASADGRPPMLHQD 436
>UNIPROTKB|E1BPU3 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:DAAA02009765 EMBL:DAAA02009763 EMBL:DAAA02009764
IPI:IPI00699088 Ensembl:ENSBTAT00000033872 Uniprot:E1BPU3
Length = 1281
Score = 479 (173.7 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 106/256 (41%), Positives = 158/256 (61%)
Query: 1 MTTLTIMRALPREVDPV-VYNM-LHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF 58
+TTL +AL R PV + N+ LH+ P ++ + +GGL D + L ++I+LP PELF
Sbjct: 808 LTTLDFQKAL-RGFTPVSLRNVNLHK-PRDLGWDRIGGLHDVRQILVDTIQLPAKYPELF 865
Query: 59 LRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 118
+ I+ GVLLYGPPGTGKTLLA IA NF+ V ++ KYIG S + +R++F
Sbjct: 866 ANLPIRQRTGVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASEQAVRDVF 925
Query: 119 GYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMAT 178
A+ +PCI+F DE ++I RR + T R + +LL QLDG + L V ++ AT
Sbjct: 926 VRAQAAKPCILFFDEFESIAPRRGHDNTGVT---DRVVNQLLTQLDGVEGLQGVYVLAAT 982
Query: 179 NRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFN 238
+RPD++DPALLRPGRLD+ + P P++ SR+EIL + + + ++D + V L + F
Sbjct: 983 SRPDLIDPALLRPGRLDKCVYCPPPDQASRLEILNVLSESLPLADDVDLQHVASLTDSFT 1042
Query: 239 GADLRNVCTEAGMSAI 254
GADL+ + A + A+
Sbjct: 1043 GADLKALLYGAQLEAL 1058
Score = 123 (48.4 bits), Expect = 0.00028, P = 0.00028
Identities = 59/232 (25%), Positives = 102/232 (43%)
Query: 51 PLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASN----IDANFLKVVSSAIIDKY 106
PL + L G++ +LL G G+GK+ LA+AI +DA+ + A+ K
Sbjct: 577 PLSRQLVSLVAGLRNG-ALLLTGGKGSGKSTLAKAICKEAFDILDAHVEIIDCKALRGKR 635
Query: 107 IGESARLIREMFGYARDHQPCIIFMDEIDAIGGRR-FSEGTSADREIQ-RTLMELLNQL- 163
+ + + F A QP ++ +D++D + GR E + IQ + L LN L
Sbjct: 636 LENIQKTLAAAFSEALWRQPSVVLLDDLDLVVGRSALPEHEHSPEAIQSQRLAHALNDLV 695
Query: 164 DGFDQLGKVKMIMATNRPD-VLDPALLRP-G-RLDRKIE-IPLPNEQSRMEILKIHA--- 216
F +G + ++AT++ L P L+ G + + ++ I P++ R EIL HA
Sbjct: 696 KEFISMGSLVALIATSQSQHSLHPLLVSAQGIHIFQCVQHIQPPDQDQRCEIL--HAIIK 753
Query: 217 ----AGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHE 264
+ + +D + + K EGF D + A S + + Y E
Sbjct: 754 NKLDCDMKRFTGLDLQRIAKETEGFVARDFTMLVDRAIHSHLSHQNVYTREE 805
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 473 (171.6 bits), Expect = 2.7e-44, P = 2.7e-44
Identities = 99/249 (39%), Positives = 154/249 (61%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
++++ V G+ + EL E +E L NPE ++R+G +PP+GVLL G PGTGKTLLA+A+A
Sbjct: 322 ITFADVAGVDEAKEELEEIVEF-LRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAG 380
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRR---FSEG 145
+ F+ +S ++ Y+G A +R++F A+ P IIF+DEIDA+ R F G
Sbjct: 381 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMG 440
Query: 146 TSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNE 205
++ +RE +TL +LL ++DGFD V ++ ATNR DVLDPAL RPGR DR + + P++
Sbjct: 441 SNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDK 498
Query: 206 QSRMEILKIHAAG--IAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIH 263
R IL++H + + +++ ++ + GF GADL N+ EA + A R + V
Sbjct: 499 IGRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEK 558
Query: 264 EDFMKAVRK 272
DF++AV +
Sbjct: 559 IDFIQAVER 567
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 473 (171.6 bits), Expect = 4.0e-44, P = 4.0e-44
Identities = 104/262 (39%), Positives = 156/262 (59%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
+ + + G+ + EL E ++ + N E + +G + PKGVLL GPPG+GKT+LARA+A+
Sbjct: 146 IRFEEIAGIDESKLELLEVVDF-IKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVAT 204
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 148
+ ++ I+ Y+G+ A+ IR++F +AR P I+F+DEIDAIGG+R S +
Sbjct: 205 EANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNG 264
Query: 149 --DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 206
RE +TL +LL ++DGF + +I ATNR D LD ALLRPGR DR + +PLP+
Sbjct: 265 AGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDIN 324
Query: 207 SRMEILKIHAAGIAKHGEI-DYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHED 265
R +IL+I+ I ++ D E + +L GF+GADL NV EA + A R + V +
Sbjct: 325 GRKKILEIYIKKIKSDLKLEDIEKIARLTPGFSGADLENVVNEATILATRNNKSLVTINE 384
Query: 266 FMKAVRKLN---EAKKLESSAH 284
+A K++ E K L S H
Sbjct: 385 LYEARDKVSMGPERKSLRQSDH 406
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 473 (171.6 bits), Expect = 4.0e-44, P = 4.0e-44
Identities = 104/262 (39%), Positives = 156/262 (59%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
+ + + G+ + EL E ++ + N E + +G + PKGVLL GPPG+GKT+LARA+A+
Sbjct: 146 IRFEEIAGIDESKLELLEVVDF-IKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVAT 204
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 148
+ ++ I+ Y+G+ A+ IR++F +AR P I+F+DEIDAIGG+R S +
Sbjct: 205 EANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNG 264
Query: 149 --DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 206
RE +TL +LL ++DGF + +I ATNR D LD ALLRPGR DR + +PLP+
Sbjct: 265 AGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDIN 324
Query: 207 SRMEILKIHAAGIAKHGEI-DYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHED 265
R +IL+I+ I ++ D E + +L GF+GADL NV EA + A R + V +
Sbjct: 325 GRKKILEIYIKKIKSDLKLEDIEKIARLTPGFSGADLENVVNEATILATRNNKSLVTINE 384
Query: 266 FMKAVRKLN---EAKKLESSAH 284
+A K++ E K L S H
Sbjct: 385 LYEARDKVSMGPERKSLRQSDH 406
>ASPGD|ASPL0000044770 [details] [associations]
symbol:AN10191 species:162425 "Emericella nidulans"
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 GO:GO:0005524
EMBL:BN001307 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
EnsemblFungi:CADANIAT00008053 OMA:QPIMDQI Uniprot:C8VM55
Length = 1631
Score = 478 (173.3 bits), Expect = 4.8e-44, P = 4.8e-44
Identities = 109/260 (41%), Positives = 154/260 (59%)
Query: 13 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 72
+ DP+ +M+ V++ VGGL I +L+E + LPL+ PE+F R I PP+GVL +
Sbjct: 556 DADPLGVDMI------VNFDNVGGLQGHIDQLKEMVSLPLLYPEIFQRFHIVPPRGVLFH 609
Query: 73 GPPGTGKTLLARAIASNIDANFLKVV-----SSAIIDKYIGESARLIREMFGYARDHQPC 127
GPPGTGKTLLARA+A+++ + KV + + K++GE+ R +R +F AR QP
Sbjct: 610 GPPGTGKTLLARALANSVSSEGRKVTFYMRKGADALSKWVGEAERQLRLLFEEARKTQPS 669
Query: 128 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPA 187
IIF DEID + R S+ I TL+ L+ DG D G+V +I ATNRPD +DPA
Sbjct: 670 IIFFDEIDGLAPVRSSKQEQIHASIVSTLLALM---DGMDGRGQVIVIGATNRPDSIDPA 726
Query: 188 LLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKH--GEIDYEAVVKLAEGFNGADLRNV 245
L RPGR DR+ PLPN + R IL IH G I E + ++ +G+ GADLR +
Sbjct: 727 LRRPGRFDREFYFPLPNTEGRRAILDIHTKGWDPPLPNSIKDE-LAEITKGYGGADLRAL 785
Query: 246 CTEAGMSAIRAERDYVIHED 265
CTEA ++A++ + D
Sbjct: 786 CTEAALNAVQRRYPQIYKSD 805
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 98/252 (38%), Positives = 150/252 (59%)
Query: 22 LHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTL 81
L E+ +++ V G + ++ E ++ L P F ++G + P G+LL G PGTGKTL
Sbjct: 144 LSEEQIKTTFADVAGCDEAKEDVAELVDY-LREPSRFQKLGGRIPSGILLVGQPGTGKTL 202
Query: 82 LARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRR 141
LA+AIA F + S ++ ++G A +R+MF A+ PCIIF+DEIDA+G +R
Sbjct: 203 LAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQR 262
Query: 142 FSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIP 201
+ E ++TL ++L ++DGF+ V +I ATNRPDVLDPALLRPGR DR++ +
Sbjct: 263 GAGMGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVTVG 322
Query: 202 LPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYV 261
LP+ + R +ILK+H + ++ E + + GF+GADL N+ EA + A R R V
Sbjct: 323 LPDIRGREQILKVHMRKVPLGDDVKAEVIARGTPGFSGADLANLVNEAALCAARTARRVV 382
Query: 262 IHEDFMKAVRKL 273
++F A K+
Sbjct: 383 SMKEFDAAKDKI 394
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 467 (169.5 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 100/235 (42%), Positives = 150/235 (63%)
Query: 25 DPG-NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 83
D G V+Y +GGLS Q++ +RE++ELPL ELF GI PP+GVLLYGPPGTGKTL+A
Sbjct: 310 DHGPQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIA 369
Query: 84 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 143
+AIA+ + A+ + II K+ GES +R++F A +P IIF+DE+DA+ +R
Sbjct: 370 KAIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPKREG 429
Query: 144 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 203
++ + +L+ L++ + G++ ++ ATNRP LD AL RPGR D++IEI +P
Sbjct: 430 AQNEVEKRVVASLLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEIEIGIP 489
Query: 204 NEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE---GFNGADLRNVCTEAGMSAIR 255
N Q R++IL+ + H E +++LA+ G+ GADL +C EAG+ A+R
Sbjct: 490 NAQDRLDILQKLLKKVP-HSLTAAE-MMQLADSAHGYVGADLAALCKEAGLYALR 542
Score = 308 (113.5 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 60/130 (46%), Positives = 87/130 (66%)
Query: 12 REVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLL 71
++V P + D VS+S +GGL D +L++++E PL +P+ F+R+GI+PPKGVLL
Sbjct: 572 KDVRPSAMREVAVDVPKVSWSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMGIQPPKGVLL 631
Query: 72 YGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFM 131
YGPPG KT++A+A+A NFL V +++KY+GES R +RE+F AR P I+F
Sbjct: 632 YGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGESERAVREIFRKARMVSPSILFF 691
Query: 132 DEIDAIGGRR 141
DEIDA+ R
Sbjct: 692 DEIDALAVER 701
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 471 (170.9 bits), Expect = 5.6e-44, P = 5.6e-44
Identities = 101/250 (40%), Positives = 151/250 (60%)
Query: 29 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 88
+ + V G+++ +E+ E ++ L NPE + ++G K P+G +L GPPGTGKTLLA+A A
Sbjct: 370 IKFKDVAGMAEAKQEVMEFVKF-LQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAG 428
Query: 89 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEG--T 146
F V S ++ ++G A +R++F AR++ P I+F+DEIDAIG +R S+G T
Sbjct: 429 EAGVPFYSVSGSEFVEMFVGVGASRVRDLFKTARENAPSIVFVDEIDAIGKQR-SKGNAT 487
Query: 147 SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 206
A+ E + TL +LL ++DGFD V ++ TNRPD+LD AL+RPGR DR + I P
Sbjct: 488 GANDERETTLNQLLVEMDGFDTSDHVVVLAGTNRPDILDRALMRPGRFDRHVHIDNPELL 547
Query: 207 SRMEILKIHAAGIAKHGEIDYEAVVKLAE---GFNGADLRNVCTEAGMSAIRAERDYVIH 263
R EI +H I +ID + +LA GF+GAD+ NVC EA + A R ++V
Sbjct: 548 GRKEIFDVHLQKITLQKDIDPDLSGRLAALTPGFSGADIANVCNEAALIAARYNAEFVTL 607
Query: 264 EDFMKAVRKL 273
F A+ ++
Sbjct: 608 RHFELAIERV 617
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 89/154 (57%), Positives = 116/154 (75%)
Query: 43 ELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAI 102
EL E+I LP+ + E F +GI+PPKGVL+YGPPGTGKTLLARA A+ A FLK+ +
Sbjct: 141 ELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQL 200
Query: 103 IDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 162
+ +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLNQ
Sbjct: 201 VQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ 260
Query: 163 LDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDR 196
LDGF +VK+I ATNR D+LDPALLR GRLDR
Sbjct: 261 LDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 294
>SGD|S000003502 [details] [associations]
symbol:YTA7 "Protein that localizes to chromatin and
regulates histone expression" species:4932 "Saccharomyces
cerevisiae" [GO:0042393 "histone binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IMP;IDA]
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 SGD:S000003502
GO:GO:0005524 GO:GO:0005634 EMBL:BK006941 GO:GO:0045944
GO:GO:0003682 GO:GO:0000122 GO:GO:0031936 eggNOG:COG0464
GO:GO:0017111 GO:GO:0042393 GO:GO:0042406 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 EMBL:Y07893 EMBL:X81072
GeneTree:ENSGT00550000074694 EMBL:Z73055 PIR:S64603
RefSeq:NP_011786.1 ProteinModelPortal:P40340 SMR:P40340
DIP:DIP-6557N IntAct:P40340 MINT:MINT-629064 STRING:P40340
PaxDb:P40340 EnsemblFungi:YGR270W GeneID:853186 KEGG:sce:YGR270W
CYGD:YGR270w HOGENOM:HOG000157282 OMA:YPELYQN OrthoDB:EOG473T0K
NextBio:973329 Genevestigator:P40340 GermOnline:YGR270W
Uniprot:P40340
Length = 1379
Score = 475 (172.3 bits), Expect = 7.5e-44, P = 7.5e-44
Identities = 99/234 (42%), Positives = 150/234 (64%)
Query: 28 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 87
NV++ +GGL + I +L+E + LPL+ PEL+ I PP+GVL +GPPGTGKTL+ARA+A
Sbjct: 409 NVNFDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALA 468
Query: 88 SNIDANFLKVV-----SSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRF 142
++ ++ K+ + I+ K++GE+ R +R +F A+ HQP IIF DEID + R
Sbjct: 469 ASCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVRS 528
Query: 143 SEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPL 202
S+ I TL+ L+ DG D G+V +I ATNRPD +DPAL RPGR DR+ PL
Sbjct: 529 SKQEQIHASIVSTLLALM---DGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPL 585
Query: 203 PNEQSRMEILKIHAAGIAKHGEIDY-EAVVKLAEGFNGADLRNVCTEAGMSAIR 255
P+ ++R +IL+I + ++ + + L +G+ GADLR++CTEA + +I+
Sbjct: 586 PDVKARFKILQIQTRKWSSPLSTNFIDKLAFLTKGYGGADLRSLCTEAALISIQ 639
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 98/254 (38%), Positives = 149/254 (58%)
Query: 24 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 83
+D +V + V G + E+ E + L NP+ + +G K PKG +L GPPGTGKTLLA
Sbjct: 144 KDEIDVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYEDLGAKIPKGAILTGPPGTGKTLLA 202
Query: 84 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 143
+A A + F+ V S ++ ++G +R++F AR + PCI+F+DEIDA+G +R
Sbjct: 203 KATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGR 262
Query: 144 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 203
E + TL +LL ++DGF+ V ++ TNRPD+LDPAL+RPGR DR+I I P
Sbjct: 263 GNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGPP 322
Query: 204 NEQSRMEILKIHAAGIAKHGEIDYEAVV-KLAE---GFNGADLRNVCTEAGMSAIRAERD 259
+ + R I K+H + +D + + KLA GF+GAD+ NVC EA + A R D
Sbjct: 323 DIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAALIAARHLSD 382
Query: 260 YVIHEDFMKAVRKL 273
+ + F +A+ ++
Sbjct: 383 AINQKHFEQAIERV 396
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 100/254 (39%), Positives = 151/254 (59%)
Query: 21 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 80
++ E+ V+++ V G+ + EL E ++ L + + F ++G K PKG LL G PGTGKT
Sbjct: 145 LMTENRNKVTFNDVAGIDEAKEELIEIVDF-LKHRQRFQKLGGKIPKGCLLIGSPGTGKT 203
Query: 81 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 140
LLARAIA + F + S ++ ++G A +R+MF + + PCIIF+DEIDA+G
Sbjct: 204 LLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRH 263
Query: 141 R-FSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIE 199
R G D E ++TL +LL ++DGF+ V +I ATNRPDVLD ALLRPGR DR++
Sbjct: 264 RGIGLGGGND-EREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVT 322
Query: 200 IPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERD 259
I +P+ R +I+ +H + +++ + + GF+GADL N+ EA + A R +
Sbjct: 323 ISIPDINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKK 382
Query: 260 YVIHEDFMKAVRKL 273
V DF A K+
Sbjct: 383 IVTMSDFEYARDKV 396
WARNING: HSPs involving 517 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.138 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 292 292 0.00090 115 3 11 22 0.38 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 767
No. of states in DFA: 569 (61 KB)
Total size of DFA: 172 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.86u 0.07s 23.93t Elapsed: 00:00:01
Total cpu time: 23.90u 0.07s 23.97t Elapsed: 00:00:01
Start: Fri May 10 18:02:27 2013 End: Fri May 10 18:02:28 2013
WARNINGS ISSUED: 2