BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 022770
         (292 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9P6R8|CWC24_SCHPO Pre-mRNA-splicing factor cwf24 OS=Schizosaccharomyces pombe (strain
           972 / ATCC 24843) GN=cwf24 PE=1 SV=1
          Length = 533

 Score = 34.7 bits (78), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 8/74 (10%)

Query: 12  RSQVGPDWSSKEALILVNEIAAVEADCLK--ALSSYQKWKIISETCTALDV---PRTANQ 66
           +SQVGP  SS  + + +N I   + D  K   L+ Y  +    +TC  L +    +   Q
Sbjct: 163 KSQVGPVLSSNASTVRMNTIIDYQPDVCKDYKLTGYCGY---GDTCKFLHMREDYKAGWQ 219

Query: 67  CRRKWDSLLDEYKK 80
             R+WDS+ ++YKK
Sbjct: 220 LDREWDSVQEKYKK 233


>sp|Q9C882|GTL1_ARATH Trihelix transcription factor GTL1 OS=Arabidopsis thaliana GN=GTL1
           PE=1 SV=2
          Length = 587

 Score = 33.5 bits (75), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/63 (26%), Positives = 30/63 (47%)

Query: 19  WSSKEALILVNEIAAVEADCLKALSSYQKWKIISETCTALDVPRTANQCRRKWDSLLDEY 78
           W   E L L+N  + +E      +     W+ IS +   +   R A +C+ KW+++   Y
Sbjct: 436 WPKAEILALINLRSGMEPRYQDNVPKGLLWEEISTSMKRMGYNRNAKRCKEKWENINKYY 495

Query: 79  KKM 81
           KK+
Sbjct: 496 KKV 498


>sp|Q8H181|GTL2_ARATH Trihelix transcription factor GTL2 OS=Arabidopsis thaliana
           GN=At5g28300 PE=2 SV=1
          Length = 619

 Score = 33.1 bits (74), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 17/108 (15%)

Query: 12  RSQVGPDWSSKEALILVN---EIAAVEADCLK---ALSSYQK----WKIISETCTALDVP 61
           +S +G  W   E L L+N    I+ +  D  K   +LS+  K    W+ IS+    +   
Sbjct: 453 KSDLGKRWPKDEVLALINIRRSISNMNDDDHKDENSLSTSSKAVPLWERISKKMLEIGYK 512

Query: 62  RTANQCRRKWDSL-------LDEYKKMIVRSRTFPNSQTQTHTDCFPP 102
           R+A +C+ KW+++        D  KK  + SRT P     T     PP
Sbjct: 513 RSAKRCKEKWENINKYFRKTKDVNKKRPLDSRTCPYFHQLTALYSQPP 560


>sp|O80450|TGT3B_ARATH Trihelix transcription factor GT-3b OS=Arabidopsis thaliana
           GN=GT-3B PE=1 SV=1
          Length = 289

 Score = 32.3 bits (72), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 16/63 (25%), Positives = 30/63 (47%)

Query: 17  PDWSSKEALILVNEIAAVEADCLKALSSYQKWKIISETCTALDVPRTANQCRRKWDSLLD 76
           P WS +E   L+     ++   ++   +   W++IS        PR+  QC+ KW +L+ 
Sbjct: 40  PQWSVEETKELIGIRGELDQTFMETKRNKLLWEVISNKMRDKSFPRSPEQCKCKWKNLVT 99

Query: 77  EYK 79
            +K
Sbjct: 100 RFK 102


>sp|Q6FQI6|SFH5_CANGA Phosphatidylinositol transfer protein SFH5 OS=Candida glabrata
           (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
           NRRL Y-65) GN=SFH5 PE=3 SV=1
          Length = 293

 Score = 31.2 bits (69), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 7/118 (5%)

Query: 167 PLKSCLHENHQKSGCTEEKLCNSHVEEEPRIRLVEKKCQNSRIKEKKSLKSCVEENEQMM 226
           PL     E H K    +  +   + EEEP  R+V        +K+K+  K  V++  +  
Sbjct: 91  PLSCAFKETHNKE-LEDVGILTWYPEEEPNKRVVTWNLYGKLVKKKELFKD-VQKFLRYR 148

Query: 227 VAKLQENAELIHAIVAESADYSDADLNNVQDLESEFVRRQGDKLIACLGEIVNTLNQF 284
           +  +++  +L++       D  +  +  V D ++  V R    + +C+ E++NT   +
Sbjct: 149 IGLMEKGIQLLNF-----QDEENCYMTQVHDYKTVSVWRMDSDMKSCVKEVINTFQTY 201


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.314    0.127    0.368 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,526,910
Number of Sequences: 539616
Number of extensions: 4106361
Number of successful extensions: 16852
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 154
Number of HSP's that attempted gapping in prelim test: 16694
Number of HSP's gapped (non-prelim): 288
length of query: 292
length of database: 191,569,459
effective HSP length: 116
effective length of query: 176
effective length of database: 128,974,003
effective search space: 22699424528
effective search space used: 22699424528
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)