BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022772
(292 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48612|PELO_DROME Protein pelota OS=Drosophila melanogaster GN=pelo PE=2 SV=2
Length = 395
Score = 313 bits (803), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 143/285 (50%), Positives = 211/285 (74%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK+L + + + G+V + P +S+D+W AYNLIA GDSV + T+RKV + A+GS + R
Sbjct: 1 MKLLGKYVDKGMQGNVTLVPEESEDMWHAYNLIAKGDSVRSTTIRKVQNETATGSSTSSR 60
Query: 61 VKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 120
V+ L I VE +D+D + VLR++G+NI EN++VK+GA+HTL++EL+R F LRK WD++
Sbjct: 61 VRTTLTIAVESIDFDTQACVLRLKGRNIEENQYVKMGAYHTLDLELNRKFELRKPEWDTI 120
Query: 121 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 180
AL+ + A DPT SAD+A V+MQEGLAH+ L+ SMT+ RS+IE SIPRK ++ +E
Sbjct: 121 ALERIEMACDPTQSADVAAVVMQEGLAHVCLITASMTLVRSKIEVSIPRKRKGSVQQHEK 180
Query: 181 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 240
L KF+E V+Q+ L+HV+F+VV+C +IASPGF +DQF+ ++ +A + + +++NKS+
Sbjct: 181 GLAKFYEQVMQSILRHVNFDVVKCVLIASPGFVRDQFYDYMFQQAVKMDYKLLLDNKSKF 240
Query: 241 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNML 285
+LVH SSG+KHSLRE+L P V+ + DTKAA EV+AL+ F+ ML
Sbjct: 241 MLVHASSGFKHSLREILQDPAVLAKMSDTKAAGEVKALEQFYMML 285
>sp|Q7ZWC4|PELO_DANRE Protein pelota homolog OS=Danio rerio GN=pelo PE=2 SV=1
Length = 385
Score = 291 bits (744), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 130/285 (45%), Positives = 206/285 (72%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++ +++ ++ G V + P +++D+W YNL+ GDS+ A T+RKV + ++GS + R
Sbjct: 1 MKLVHKDIEKDNAGQVTLIPDEAEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSSR 60
Query: 61 VKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 120
V+ L + VE +D+D + LR++G NI EN++VK+GA+HT+E+EL+R F L K +WDS+
Sbjct: 61 VRTTLTLCVETIDFDSQACQLRVKGTNIQENQYVKMGAYHTIELELNRKFTLAKKVWDSV 120
Query: 121 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 180
LD + QA DP AD+A V+MQEGLA+++LV +MT+ R+++E +IPRK + ++
Sbjct: 121 VLDRIEQACDPAQKADVAAVVMQEGLANLVLVTPAMTLLRAKVEVTIPRKRKGSCTQHDK 180
Query: 181 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 240
AL +F+E V+Q L+H +F+VV+C ++ASPGF KDQF +L EA R+ + ++EN+S+
Sbjct: 181 ALERFYEAVMQGILRHFNFDVVKCILVASPGFVKDQFISYLFKEAVRQDCKLLLENRSKF 240
Query: 241 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNML 285
++VH+SSG+K+SL+EVL P V + DTKAA EV+AL+DF+ ML
Sbjct: 241 MVVHSSSGHKYSLKEVLCDPAVTARLSDTKAAGEVKALEDFYKML 285
>sp|Q5RCE3|PELO_PONAB Protein pelota homolog OS=Pongo abelii GN=PELO PE=2 SV=1
Length = 385
Score = 289 bits (739), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 131/285 (45%), Positives = 202/285 (70%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++R+N+ ++ G V + P + +D+W YNL+ GDS+ A T+RKV + ++GS + R
Sbjct: 1 MKLVRKNIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 120
V+ L + VE +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 121 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 180
L+ + QA DP SAD+A V+MQEGLAHI LV SMT+TR+++E +IPRK + ++
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 181 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 240
AL +F+E V+QA +H+ F+VV+C ++ASPGF ++QF ++ +A + + ++EN+S+
Sbjct: 181 ALERFYEQVVQAIQRHIHFDVVKCILVASPGFVREQFCDYMFQQAVKTDNKLLLENRSKF 240
Query: 241 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNML 285
+ VH SSG+K+SL+EVL P V + + DTKAA EV+AL DF+ ML
Sbjct: 241 LQVHASSGHKYSLKEVLCDPTVASRLSDTKAAGEVKALDDFYKML 285
>sp|Q9BRX2|PELO_HUMAN Protein pelota homolog OS=Homo sapiens GN=PELO PE=1 SV=2
Length = 385
Score = 288 bits (737), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 131/285 (45%), Positives = 201/285 (70%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++R+N+ ++ G V + P + +D+W YNL+ GDS+ A T+RKV + ++GS + R
Sbjct: 1 MKLVRKNIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 120
V+ L + VE +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 121 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 180
L+ + QA DP SAD+A V+MQEGLAHI LV SMT+TR+++E +IPRK + ++
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 181 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 240
AL +F+E V+QA +H+ F+VV+C ++ASPGF ++QF +L +A + + ++EN+S+
Sbjct: 181 ALERFYEQVVQAIQRHIHFDVVKCILVASPGFVREQFCDYLFQQAVKTDNKLLLENRSKF 240
Query: 241 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNML 285
+ VH SSG+K+SL+E L P V + + DTKAA EV+AL DF+ ML
Sbjct: 241 LQVHASSGHKYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKML 285
>sp|Q5U567|PELO_XENLA Protein pelota homolog OS=Xenopus laevis GN=pelo PE=2 SV=1
Length = 383
Score = 288 bits (736), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 134/285 (47%), Positives = 200/285 (70%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++R+++ ++ G V + P +++D+W YNL+ GDS+ A T+RKV + ++GS + R
Sbjct: 1 MKLIRKDIEKDNAGQVTLIPEEAEDMWHTYNLLHVGDSLQASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 120
V+ L I VE +D+D + LR++G NI EN++VK+GA+HT+E+E +R F L K WDS+
Sbjct: 61 VRTTLTICVETIDFDSQACQLRVKGINIQENQYVKMGAYHTIELEPNRKFTLAKKQWDSI 120
Query: 121 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 180
L+ + QA DP SAD+A V+MQEGLAHI LV SMT+ R++IETSIPRK +E
Sbjct: 121 VLERIEQACDPAFSADVAAVVMQEGLAHICLVTPSMTLLRAKIETSIPRKRRGNCTQHEK 180
Query: 181 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 240
AL KF+E V+Q L+H++F+VV+ ++ASPGF ++QF L L A ++ L+ ++EN+ +
Sbjct: 181 ALEKFYEQVMQGILRHINFDVVKVVLVASPGFVREQFCEFLFLRAVKQDLKILLENRGKF 240
Query: 241 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNML 285
+ VH+SSG K+SL EVL P V + DTKAA E++AL DF+ ML
Sbjct: 241 LQVHSSSGRKYSLTEVLCDPAVTARLSDTKAACEIKALGDFYKML 285
>sp|Q5XIP1|PELO_RAT Protein pelota homolog OS=Rattus norvegicus GN=Pelo PE=2 SV=1
Length = 385
Score = 287 bits (735), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 129/285 (45%), Positives = 202/285 (70%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++R+++ ++ G V + P + +D+W YNL+ GDS+ A T+RKV + ++GS + R
Sbjct: 1 MKLVRKDIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 120
V+ L + VE +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 121 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 180
L+ + QA DP SAD+A V+MQEGLAH+ LV SMT+TR+++E +IPRK + ++
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 181 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 240
AL +F+E V+QA +H++F VV+C ++ASPGF ++QF ++ +A + + ++EN+S+
Sbjct: 181 ALERFYEQVVQAIQRHINFEVVKCILVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKF 240
Query: 241 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNML 285
+ VH SSG+K+SL+EVL P V + + DTKAA EV+AL DF+ ML
Sbjct: 241 LQVHASSGHKYSLKEVLCDPTVASRLSDTKAAGEVKALDDFYKML 285
>sp|Q58DV0|PELO_BOVIN Protein pelota homolog OS=Bos taurus GN=PELO PE=2 SV=2
Length = 385
Score = 286 bits (732), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 129/285 (45%), Positives = 201/285 (70%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++R+++ ++ G V + P + +D+W YNL+ GDS+ A T+RKV + ++GS + R
Sbjct: 1 MKLVRKDIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 120
V+ L + VE +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 121 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 180
L+ + QA DP SAD+A V+MQEGLAHI LV SMT+TR+++E +IPRK + ++
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 181 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 240
AL +F+E V+QA +H+ F+VV+C ++ASPGF ++QF ++ +A + + ++EN+S+
Sbjct: 181 ALERFYEQVVQAIQRHIHFDVVKCVLVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKF 240
Query: 241 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNML 285
+ VH SSG+K+SL+E L P V + + DTKAA EV+AL DF+ ML
Sbjct: 241 LQVHASSGHKYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKML 285
>sp|Q80X73|PELO_MOUSE Protein pelota homolog OS=Mus musculus GN=Pelo PE=2 SV=3
Length = 385
Score = 284 bits (727), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 127/285 (44%), Positives = 201/285 (70%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++R+++ ++ G V + P + +D+W +NL+ GDS+ A T+RKV + ++GS + R
Sbjct: 1 MKLVRKDIEKDNAGQVTLVPEEPEDMWHTFNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 120
V+ L + VE +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 121 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 180
L+ + QA DP SAD+A V+MQEGLAH+ LV SMT+TR+++E +IPRK + ++
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 181 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 240
AL +F+E V+QA +H++F VV+C ++ASPGF ++QF ++ +A + + ++EN+S+
Sbjct: 181 ALERFYEQVVQAIQRHINFEVVKCVLVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKF 240
Query: 241 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNML 285
+ VH SSG+K+SL+E L P V + + DTKAA EV+AL DF+ ML
Sbjct: 241 LQVHASSGHKYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKML 285
>sp|Q5ZK01|PELO_CHICK Protein pelota homolog OS=Gallus gallus GN=PELO PE=2 SV=1
Length = 385
Score = 281 bits (720), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 126/285 (44%), Positives = 201/285 (70%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++R++L ++ G V + P + +D+W YNL+ GDS+ A T+RKV + ++GS + R
Sbjct: 1 MKLVRKDLEKDNAGQVTLIPEEPEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 120
++ L + VE +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+
Sbjct: 61 IRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 121 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 180
L+ + QA DP +AD+A V+MQEGLAH+ LV SMT+TR+++E +IPRK + ++
Sbjct: 121 VLERIEQACDPAWNADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 181 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 240
AL +F+E V+QA +H++F VV+C ++ASPGF ++QF ++ +A + + ++EN+S+
Sbjct: 181 ALERFYEQVVQAIQRHINFEVVKCVLVASPGFVREQFCDYMFQQAVKTDNKLLLENRSKF 240
Query: 241 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNML 285
+ VH+SSG+K+ L+E L P V + + DTKAA EV+AL DF+ ML
Sbjct: 241 LQVHSSSGHKYVLKEALCDPAVTSRLSDTKAAGEVKALDDFYKML 285
>sp|Q9USL5|DOM34_SCHPO Protein dom34 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=dom34 PE=1 SV=1
Length = 390
Score = 231 bits (590), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 186/286 (65%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++++N+ +NG G + M P + +D+W YN++ GD + A TVR+V++ A+GS R
Sbjct: 1 MKLIQKNIEKNGSGWITMCPEEPEDMWHLYNILQVGDQLKASTVRRVVKVGATGSTSGSR 60
Query: 61 VKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 120
V +KL I VE +D+D + + L I+G+ + VK+G++HTL++ELHR F L K+ WD+
Sbjct: 61 VVMKLRILVENMDFDTKAAQLHIKGRTTEYHPEVKMGSYHTLDLELHRNFTLYKNEWDAF 120
Query: 121 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 180
ALD + A +P+ +A++ V++ EGLA+I L+ MTI R RI+ IPRK + Y+
Sbjct: 121 ALDRVDAACNPSRNAEIGAVVLDEGLANICLITDYMTILRQRIDQVIPRKRRGDSSAYQK 180
Query: 181 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 240
L+KF+++V Q+ DF+ ++ ++ASPGF + ++ A + L+ I+++K++
Sbjct: 181 GLDKFYDSVFQSINSEFDFDKLKVVILASPGFVARGLYDYIFSMAVKLDLKQIVKSKNKF 240
Query: 241 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLT 286
+++H+S+G+ HSL E+L P V + + DTK QE++ L F++++
Sbjct: 241 VILHSSTGHIHSLNEILKDPAVESKLADTKYVQEIRVLNKFYDVMN 286
>sp|P50444|YNU6_CAEEL Uncharacterized protein R74.6 OS=Caenorhabditis elegans GN=R74.6
PE=3 SV=1
Length = 381
Score = 230 bits (587), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 190/287 (66%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK +R + +G G V + +++D+W YNLI GD + A T+RKV+ + ++G+ ++R
Sbjct: 1 MKQFKRGIERDGTGFVVLMAEEAEDMWHIYNLIRIGDIIKASTIRKVVSETSTGTTSSQR 60
Query: 61 VKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 120
V L + VE +D+D L ++G+NI EN+ VK+GA+HT+++E +R F L+K WDS+
Sbjct: 61 VHTMLTVSVESIDFDPGAQELHLKGRNIEENDIVKLGAYHTIDLEPNRKFTLQKTEWDSI 120
Query: 121 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 180
L+ L+ A DP +AD+A V++ EGLA++ L+ +MT+TR++I+ +IPRK + +E
Sbjct: 121 DLERLNLALDPAQAADVAAVVLHEGLANVCLITPAMTLTRAKIDMTIPRKRKGFTSQHEK 180
Query: 181 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 240
L KF+E V AF++HV+ VV+C ++AS GF KD F +HL+ A+ + E +++
Sbjct: 181 GLEKFYEAVSTAFMRHVNLQVVKCVIVASRGFVKDAFMQHLIAHADANGKKFTTEQRAKF 240
Query: 241 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTN 287
+L H+SSG+KH+L+EVL+ P V + DTKA EV+AL F +++
Sbjct: 241 MLTHSSSGFKHALKEVLETPQVALRLADTKAQGEVKALNQFLELMST 287
>sp|P33309|DOM34_YEAST Protein DOM34 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=DOM34 PE=1 SV=2
Length = 386
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 141/284 (49%), Gaps = 8/284 (2%)
Query: 4 LRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKL 63
L+++ G + + P D +DL+ Y ++ D + + +K ++ + +
Sbjct: 6 LKKDSFNKGGAVITLLPEDKEDLFTVYQIVDKDDEL--IFKKKFTSKLDEAGKKKSTDLV 63
Query: 64 KLEIKVEVVDYDKEGSVLRIRGKNILE-----NEHVKIGAFHTLEIELHRAFVLRKDLWD 118
KL+IKV D+D + L+ +G + + N + +G + + ++ F + K ++
Sbjct: 64 KLKIKVISEDFDMKDEYLKYKGVTVTDESGASNVDIPVGKYLSFTLDYVYPFTIIKQNFN 123
Query: 119 SLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPA-IAG 177
L++A + +D A V++QEG+AH+ LV S TI + +IE S+P+K +
Sbjct: 124 KFMQKLLNEACNIEYKSDTAAVVLQEGIAHVCLVTSSSTILKQKIEYSMPKKKRTTDVLK 183
Query: 178 YESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENK 237
++ KF++ + A K ++F+ ++ ++ SPGF + AE + I++NK
Sbjct: 184 FDEKTEKFYKAIYSAMKKDLNFDKLKTIILCSPGFYAKILMDKIFQYAEEEHNKKILDNK 243
Query: 238 SRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDF 281
+ H S+GY + EVL P + ++DTK ++E+ + +F
Sbjct: 244 GMFFIAHCSTGYLQGINEVLKNPLYASKLQDTKYSKEIMVMDEF 287
>sp|A3DMX7|PELO_STAMF Protein pelota homolog OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=pelA PE=3 SV=1
Length = 356
Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 24/288 (8%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MKIL ++L + G +K+ P D DDLW YN+I P D V A T R + S SR R
Sbjct: 1 MKILEKDLRK---GYLKILPEDQDDLWALYNIIKPLDRVTATTSRDIKHGETSSSR---R 54
Query: 61 VKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKI-GAFHTLEIELHRAFVLRKDLWDS 119
+ + L I+V+ +++ LRIRG + E + G +HTL IE + ++ K+ W
Sbjct: 55 IPMTLTIEVKTLEFQPFTERLRIRGIVVEGPERYGVKGHYHTLNIEPGKPLIIWKEKWSE 114
Query: 120 LALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYE 179
L+ + + LA E A I L+ ++IP K P + ++
Sbjct: 115 NELEIISRFTSRKQKVLLATFDYDE--AAIALLTEQGIRLLEEFTSNIPGKREPVL--FQ 170
Query: 180 SALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 239
L K+ ++ + L +++ V VIASPG + ++R R I E K
Sbjct: 171 KGLEKYLSSIAEKILDYINKFQVDIVVIASPG------------DLQKRVARIIKEKKPV 218
Query: 240 IILVHTSS-GYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLT 286
I+ T S G + +RE+L +V +K+T + + L +F L+
Sbjct: 219 NIITDTVSIGGQSGIRELLRRDSVREAVKETNIIKAQRILDEFHKNLS 266
>sp|C5A5T8|PELO_THEGJ Protein pelota homolog OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=pelA PE=3 SV=1
Length = 357
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 22/278 (7%)
Query: 7 NLVENGP--GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVK-- 62
++E P G VK++ DDLW Y++I PGD V A T+RK + S S AE+V+
Sbjct: 2 QILEEKPKEGIVKVKAETLDDLWHLYHVIDPGDVVYAKTLRK--QAQRSDSLRAEKVEVI 59
Query: 63 -LKLEIKVEVVDYDKEGSVLRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSL 120
+ L +K E +++ K + +R+ G + + + V +G +HT+ IE ++K W
Sbjct: 60 PVYLGVKAEKINFHKFANQVRVTGPIVYASRDDVPLGKYHTITIEEGTVVTIQKPRWKEH 119
Query: 121 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAI--AGY 178
++ L +A + + A + +V++ EG A I LV R + + SI R G
Sbjct: 120 HIERLKEAIEASKRAKVMIVVIDEGEADIALV-REYGV---EMVASIRRNLGGKRYNTDR 175
Query: 179 ESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKS 238
ES +FF ++ + + ++ + A++A PGF K+ FH+ L R+ P E
Sbjct: 176 ESEEKRFFHDLAKTMAELMEREKIEKAIVAGPGFVKEDFHKFL------RENYP--ELAK 227
Query: 239 RIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQ 276
++++ TS + + EV+ V + + + A+EVQ
Sbjct: 228 KVVIEDTSVTGRTGIYEVIKRGTVDRVYHENRVAKEVQ 265
>sp|O59148|PELO_PYRHO Protein pelota homolog OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=pelA
PE=3 SV=1
Length = 356
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 138/276 (50%), Gaps = 18/276 (6%)
Query: 7 NLVENGP--GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLK 64
++E P G VK++ DDLW Y++I PGD V A T+RK + S S E+V++
Sbjct: 2 EILEEKPKEGKVKIKVETLDDLWHLYHIITPGDVVYAKTLRK--QSQRSDSLRPEKVEVI 59
Query: 65 ---LEIKVEVVDYDKEGSVLRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSL 120
L +KVE +++ K + LR+ G I + E V +G +HT+ +E L+K+ W
Sbjct: 60 PVFLGVKVEKINFHKFANQLRVTGPIIYASREDVPLGKYHTIAVEPGTIITLQKERWKPY 119
Query: 121 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 180
++ L +A + + A + +V +++G A + +V + I ++ K E
Sbjct: 120 YIERLKEAVEASKRAKVMIVTIEDGEAEMAIVREYGLDFIATIRHNLGGKR--YNIKRED 177
Query: 181 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 240
KFF +V + + ++ A++A PGF K+ F++ L ++ P + S+I
Sbjct: 178 EERKFFHDVAKTMKDVMSRENIQRAIVAGPGFYKEDFYKFL------KENYPDL--ASKI 229
Query: 241 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQ 276
+L TS G + + EV+ V + +++ A E++
Sbjct: 230 VLDDTSMGGRVGIYEVIKRGTVDKVYSESRIANEIK 265
>sp|Q9V0V3|PELO_PYRAB Protein pelota homolog OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=pelA PE=3 SV=1
Length = 356
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 131/265 (49%), Gaps = 12/265 (4%)
Query: 14 GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMAS-GSRDAERVKLKLEIKVEVV 72
G VK++ DDLW Y++I+PGD V A T+RK ++ S E + + L ++ E +
Sbjct: 11 GKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIPVFLGVRAEKI 70
Query: 73 DYDKEGSVLRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADP 131
+ + + LR+ G + + + V +G +HT+ +E ++K+ W S ++ + +A +
Sbjct: 71 NLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHHVERIKEAVEA 130
Query: 132 TASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQ 191
+ A + +V M++G A + +V + I +I K E KFF +V +
Sbjct: 131 SKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKR--YNVKREDEEKKFFHDVAK 188
Query: 192 AFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKH 251
++ V+ ++A PGF K+ F+ L R+ P E +++L TS G +
Sbjct: 189 TIKDLIERENVQKVIVAGPGFYKENFYGFL------RENYP--ELAGKVVLDDTSMGGRV 240
Query: 252 SLREVLDAPNVMNMIKDTKAAQEVQ 276
+ EV+ V + +T+ AQE++
Sbjct: 241 GVYEVIKRGTVDKVYTETRVAQEIK 265
>sp|Q0W6H4|PELO_UNCMA Protein pelota homolog OS=Uncultured methanogenic archaeon RC-I
GN=pelA PE=3 SV=1
Length = 357
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 13/266 (4%)
Query: 14 GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKL-KLEIKVEVV 72
G + ++P DDLW ++ PGD+V A+T R V D KL +L IKVE
Sbjct: 13 GEISLQPESLDDLWHLKYIVEPGDTVFAMTFRAVDSVSDKIRPDKVEKKLVRLGIKVEST 72
Query: 73 DYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPT 132
++ K + LRI+G I + + GA+HTL IE + + K W S ++ + A + +
Sbjct: 73 EFHKFSNRLRIKGTIISD---LDAGAYHTLNIEPYSELSIAKH-WKSDQIERIRDAVEAS 128
Query: 133 ASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQA 192
++ +V ++EG A I + + SRI + K A A +FF V A
Sbjct: 129 KRPEVEIVTIEEGEAAIGYLRQYGIEEVSRIRQASSGKREGADARSVDGRGEFFGEVA-A 187
Query: 193 FLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHS 252
LK+ D V+ V+A PGF KD F + L + + I+E+ S I SSG++
Sbjct: 188 QLKYAD--KVQTIVVAGPGFIKDDFVKFLRVNHPAVAQKVIVEDTSSI----GSSGFQEV 241
Query: 253 LREVLDAPNVMNMIKDTKAAQEVQAL 278
LR V + T+ AQ ++AL
Sbjct: 242 LRRGA-IQRVAEENRITREAQLIEAL 266
>sp|Q5V3G6|PELO_HALMA Protein pelota homolog OS=Haloarcula marismortui (strain ATCC 43049
/ DSM 3752 / JCM 8966 / VKM B-1809) GN=pelA PE=3 SV=1
Length = 355
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 130/283 (45%), Gaps = 20/283 (7%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMAS-GSRDAE 59
M+I + G +++ P DDLW +I PGD V T R++ R + + E
Sbjct: 1 MQIQSQETTAEGAERIEVVPETLDDLWHLSYVIEPGDLVSGDTTRRIQRNDDNLRDKGGE 60
Query: 60 RVKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDS 119
R + ++I+V V++ K + LR+ G+ + + ++G HTL +E H + K L
Sbjct: 61 REPMWIQIEVTDVEFAKFANRLRVGGEIVDCSREDQLGFHHTLNVEEHTELTVEKHLKPD 120
Query: 120 LALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYE 179
A D L +A + T + D+A+ ++EG AH+ V + T R+ I ++ + Y
Sbjct: 121 QA-DRLEEAVEATENPDVAIATVEEGEAHVHTVAQYGTEERATITSTTGKGE------YA 173
Query: 180 SALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 239
+ F+ L + LK D V ++A PGFTK H E I + +
Sbjct: 174 RPRKELFDE-LASVLKRQD---VDAYILAGPGFTKQDALDHFQDE--------IPDIAEQ 221
Query: 240 IILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFF 282
I +V TS+ + EVL V ++ + T+ A+E + +
Sbjct: 222 ITVVDTSAVGDRGVHEVLKRGAVEDVQQQTRIAEEADYIDELM 264
>sp|O27679|PELO_METTH Protein pelota homolog OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=pelA PE=3 SV=2
Length = 353
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 14 GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVK--LKLEIKVEV 71
G +++ P DDLW ++I GD + A T R++ R VK L I+VE
Sbjct: 11 GVIELVPETLDDLWHLSHIIEEGDLLSARTTRRIQDTSGEKIRSDRGVKKTFYLGIRVET 70
Query: 72 VDYDKEGSVLRIRGKNILE---NEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQA 128
V + R+R ++E + V +G+ HTLE++L+ ++K+ W L L A
Sbjct: 71 VSFHI--YTGRLRATGVIERGPEDLVPMGSHHTLEVKLNTPLRIQKEHWSRWTLKRLRMA 128
Query: 129 ADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESA--LNKFF 186
+ + +++M++ +A + L+ + R I IP G I + +F+
Sbjct: 129 VRASKNLKAIILVMEDDVAELGLIRQYGVEYRGPITGHIP---GKRIQQRDRGKLRREFY 185
Query: 187 ENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTS 246
E+++++ K+ D + +IA PGF K F+ +L+ + P I K+ +L +T
Sbjct: 186 ESIVESLQKYGDLETI---IIAGPGFYKSDFYDYLM------ERYPEIAKKA--VLENTG 234
Query: 247 SGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNML 285
+G + + EVL V + + + A E++ + +F L
Sbjct: 235 TGGRAGISEVLRKGTVERVSSEKRIASEIRNVNEFLEKL 273
>sp|B6YUV3|PELO_THEON Protein pelota homolog OS=Thermococcus onnurineus (strain NA1)
GN=pelA PE=3 SV=1
Length = 357
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 137/274 (50%), Gaps = 24/274 (8%)
Query: 14 GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLK---LEIKVE 70
G VK++ DDLW Y++I GD V A T+RK + S S AE+V++ L ++ E
Sbjct: 11 GKVKVKAETLDDLWHLYHIIDEGDVVYAKTLRK--QSQRSDSLRAEKVEVIPVFLGVRAE 68
Query: 71 VVDYDKEGSVLRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAA 129
+++ K + +R+ G + + E V +G +HT+ IE ++K W ++ L +A
Sbjct: 69 KINFHKFANQVRVTGPIVYASREDVPLGKYHTIAIEEGTVVTIQKPRWKEHHIERLREAV 128
Query: 130 DPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGY----ESALNKF 185
+ A + +V++ +G A + LV R + I TSI +H Y E+ +F
Sbjct: 129 SASKRARVMIVVIDDGEADMALV-REYGV---EILTSI--RHNLGGKRYNTDREAEEKRF 182
Query: 186 FENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHT 245
F +V + + ++ V A++A PGF K+ F++ L R+ P E ++++ T
Sbjct: 183 FHDVAKTMEEIMNREKVEKAIVAGPGFVKEDFYKFL------RENYP--ELVKKVVIEDT 234
Query: 246 SSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALK 279
S + + EV+ V + + + A+EVQ ++
Sbjct: 235 SVTGRTGIYEVIKRGTVDRVYHENRVAKEVQLIE 268
>sp|Q5JIB9|PELO_PYRKO Protein pelota homolog OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pelA PE=3 SV=1
Length = 357
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 137/278 (49%), Gaps = 22/278 (7%)
Query: 7 NLVENGP--GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMAS-GSRDAERVKL 63
++E P G VK++ DDLW Y++I PGD V A T+RK ++ S + E + +
Sbjct: 2 QILEEKPKEGKVKVKAETLDDLWHLYHIIDPGDIVYAKTLRKQAQRADSLRAEKVEVIPV 61
Query: 64 KLEIKVEVVDYDKEGSVLRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLAL 122
L ++ E +++ K + +R+ G + + E V +G +HT+ IE ++K W +
Sbjct: 62 FLGVQAEKINFHKFANQVRVTGPIVYASREDVPLGKYHTIAIEQGTVVTIQKPRWKEHHI 121
Query: 123 DTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGY---- 178
+ L +A + A + +V++ +G A + LV R + I SI +H Y
Sbjct: 122 ERLKEAVAASKRARVMIVVIDDGEADMALV-REYGV---EILNSI--RHNLGGKRYNTDR 175
Query: 179 ESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKS 238
ES KFF +V + + + V A++A PGF K+ F++ L ++ P E
Sbjct: 176 ESEEMKFFHDVAKTMEEVMKRENVEKAIVAGPGFVKEDFYKFL------KEKYP--ELAK 227
Query: 239 RIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQ 276
++++ TS + + EV+ V + ++ + A+EVQ
Sbjct: 228 KVVIEDTSVTGRTGIYEVIKRGVVDRVYQENRVAKEVQ 265
>sp|Q3INN9|PELO_NATPD Protein pelota homolog OS=Natronomonas pharaonis (strain DSM 2160 /
ATCC 35678) GN=pelA PE=3 SV=1
Length = 355
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 22/287 (7%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD--A 58
M+I+ R E + + P DDLW ++ PGD V T R++ R RD
Sbjct: 1 MRIVDRESAEGRRERITLVPETLDDLWHLTYVLEPGDLVAGDTTRRIQRD-DDKMRDTGG 59
Query: 59 ERVKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWD 118
ER + + I V V++ K + LR+ G + + ++G HT +E H + K +W
Sbjct: 60 EREPMWIRIDVNNVEFAKFANRLRVGGDIVDCSREDQLGFHHTFNVEEHDELTVEK-VWQ 118
Query: 119 SLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGY 178
L+ L +A + D+A+ ++EG AHI V + R+ I + + Y
Sbjct: 119 VDQLERLEEAVEAAEQPDVAIATVEEGQAHIHTVAQYGVEERASITGTTGKGE------Y 172
Query: 179 ESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKS 238
+ ++ FE L A L+ +D + ++A PGFTK H+ A P E
Sbjct: 173 ARSRDELFEE-LAAILRRLDAEAI---ILAGPGFTKQDALEHIEDNA------P--EAAE 220
Query: 239 RIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNML 285
+I +V T+S + EVL V + +T+ ++E + + + +
Sbjct: 221 KIQVVDTASVGDRGVHEVLKRGAVDRIQTETRVSKEAELIDELMERI 267
>sp|Q8U150|PELO_PYRFU Protein pelota homolog OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=pelA PE=3 SV=1
Length = 356
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 134/280 (47%), Gaps = 28/280 (10%)
Query: 8 LVENGP--GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMAS-GSRDAERVKLK 64
++E P G +K++ DDLW Y++I+ GD V A T+RK ++ S E V +
Sbjct: 3 ILEEKPKEGKIKIKAETLDDLWHLYHIISEGDVVYAKTLRKQAQRSDSLRPEKVEAVPVF 62
Query: 65 LEIKVEVVDYDKEGSVLRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLALD 123
L IK E ++ + + LRI G I + E V +G +HTL +E ++K+ W + ++
Sbjct: 63 LGIKAEKINLHRFANQLRITGPIIYASREDVPLGRYHTLTVEPGTVITIQKEKWKNYHIE 122
Query: 124 TLHQAADPTASADLAVVLMQEGLAHILLVGR-------SMTITRSRIETSIPRKHGPAIA 176
L +A + + A + +V +++G A I +V S+T S +I R
Sbjct: 123 RLKEAIESSKKARVMIVAIEDGEAEIAIVREYGLDFVGSITYNISGKRYNIKR------- 175
Query: 177 GYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIEN 236
+ KFF V ++ + + + A++A PGF K+ F L R+ P E
Sbjct: 176 --DDEEKKFFHEVAKSMEELMKRENIEKAIVAGPGFYKENFVNFL------RENYP--EL 225
Query: 237 KSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQ 276
+++ TS G + + EV+ V + +++ ++E++
Sbjct: 226 AKKVVTDDTSMGGRTGIYEVIKRGTVDKVYTESRISKEIK 265
>sp|A7I7Y6|PELO_METB6 Protein pelota homolog OS=Methanoregula boonei (strain 6A8) GN=pelA
PE=3 SV=1
Length = 341
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 134/279 (48%), Gaps = 36/279 (12%)
Query: 9 VENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD------AERVK 62
+++ G +++ P DDLW +L++PGD V A T R V G+ D E+
Sbjct: 8 IKDNYGEIRLFPESIDDLWHLQHLVSPGDLVFATTFRSV-----EGATDKIRPEKVEKRP 62
Query: 63 LKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIEL-HRAFVLRKDLWDSLA 121
++L ++VE V++ G LRI G I+E+ + GA+HT+ +E + V+R+ W +
Sbjct: 63 VRLGVRVEKVEFSHHGVRLRISG--IIEH-GMDTGAYHTINVETGYEISVIRR--WRPVD 117
Query: 122 LDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESA 181
L+ L +A + + ++ ++EG A + + + E+ I G G
Sbjct: 118 LERLDRAVKASVYGVIHILTLEEGEAELF------RLRQYGPESVITITAGSGKGGETET 171
Query: 182 LNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRII 241
FF+ V+++ + V VIA PGF K+ F R+ A+ + P R I
Sbjct: 172 RTGFFDTVIKSIAE-----VSGPMVIAGPGFVKEDFVRY----AKNKNCAP----AGRAI 218
Query: 242 LVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKD 280
+ T + ++++V+ A + +I D + ++EV+ + +
Sbjct: 219 VAETRRIGRGAVQDVIGAGTLEKLIGDLQLSREVRLMDE 257
>sp|A5UKW7|PELO_METS3 Protein pelota homolog OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=pelA PE=3 SV=1
Length = 353
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 136/285 (47%), Gaps = 18/285 (6%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MKI++++ E G V + P DDLW +++ GDSV + T R++ R
Sbjct: 1 MKIVKQDKKE---GIVTLVPETLDDLWHLSHIVEVGDSVSSKTTRRIQDNTGDKLRSDRG 57
Query: 61 VK--LKLEIKVEVVDYDKEGSVLRIRGKNILENEH-VKIGAFHTLEIELHRAFVLRKDLW 117
VK L I VE + + LR+ G E + +G+ HT+E++L+ ++K+ W
Sbjct: 58 VKKTFTLRIDVENITFHIFTGKLRLTGVITKGPEDLIPLGSHHTVEVKLNTPITIKKEKW 117
Query: 118 DSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAG 177
+ AL L+QA + + +VL+++ A + L+ + I+ S+ K
Sbjct: 118 ANWALKRLNQAIEASKKLAAIIVLLEDDTATLGLMRQFGIEYYGPIKGSVSGKR-IVDKN 176
Query: 178 YESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENK 237
A+ +F+E V+++ K F+ ++ V+A PGF K+ F+ ++ + + + IIE+
Sbjct: 177 RSKAIAQFYEKVIESVNK---FHDIQNIVVAGPGFVKNDFYDYIKNKHKDLADKAIIES- 232
Query: 238 SRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFF 282
T SG + + EVL V + + + A E+ A+ +
Sbjct: 233 -------TGSGGRVGIHEVLKKGTVEKLTVENRVASEMVAINNLL 270
>sp|Q57638|PELO_METJA Protein pelota homolog OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=pelA PE=3 SV=1
Length = 347
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 132/271 (48%), Gaps = 22/271 (8%)
Query: 16 VKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQ--MASGSRDAERVKLKLEIKVEVVD 73
+K+ P + DDLW YN+I GD + AVT R+V + + R A+R K+ L I+V+ V+
Sbjct: 13 IKLMPENLDDLWVLYNIIEEGDKIFAVTERRVQDKGDVIRADRGAKR-KMFLGIEVKNVE 71
Query: 74 YDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTA 133
+D+ +RI G I + V +G+ HT+EI+ + K+ W ++ + +A + +
Sbjct: 72 FDENTKRVRILGTIIHGPDDVPLGSHHTIEIKPFDELSIEKN-WKKWQIERIKEAIESSK 130
Query: 134 SADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYE--SALNKFFENVLQ 191
+ VV+M + A I V R +I E + H Y+ L K + + +
Sbjct: 131 RPKVLVVVMDDEEADIFEV-RDYSIK----EICSIKSHTSKKLDYKINEELKKEYYHEIA 185
Query: 192 AFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKH 251
L D + + ++A PGF K+ F+ + ++ +L K++I++ S+ +
Sbjct: 186 KVLSEYDVDNI---LVAGPGFAKNSFYN--FISSQYPEL------KNKIVVESISTTSRA 234
Query: 252 SLREVLDAPNVMNMIKDTKAAQEVQALKDFF 282
L EV+ + + +++ A+E Q ++
Sbjct: 235 GLNEVIKRGIINRIYAESRVAKETQLIEKLL 265
>sp|Q2NFD9|PELO_METST Protein pelota homolog OS=Methanosphaera stadtmanae (strain DSM
3091) GN=pelA PE=3 SV=1
Length = 351
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 133/266 (50%), Gaps = 20/266 (7%)
Query: 14 GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLK--LEIKVEV 71
G +++ P DDLW +++ D V +T R++ + +R VK K L I+VE
Sbjct: 11 GLIEVVPETIDDLWHLSHIVEVNDYVSTLTARRIQDNNSGKTRADRGVKKKFFLGIRVEK 70
Query: 72 VDYDKEGSVLRIRGKNILEN---EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQA 128
+++ K +LR G I+E+ + + +G+ HT+ ++L+ + ++K +W+ +L+ L+QA
Sbjct: 71 INFHKYTGMLRFTG--IIESGPEDLIPLGSHHTINVQLNNSIRIKK-IWNKWSLERLNQA 127
Query: 129 ADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFEN 188
+ + A+ +V +++ + ++ + I I K +N+++E+
Sbjct: 128 IEASNRANEIIVAIEDNTTELGIIKQYGIDYIGPIIGDISGKQNIE-KNRAQKVNEYYED 186
Query: 189 VLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSG 248
+ + + D + + +I PGFTK+ ++ +L E +L ++IL T +G
Sbjct: 187 ITKTLTQQKDIDKL---IIIGPGFTKNGYYNYL--EENYPKL------AKKVILESTGAG 235
Query: 249 YKHSLREVLDAPNVMNMIKDTKAAQE 274
++EVL + ++ KD K A+E
Sbjct: 236 GHAGIQEVLKNGLIESLSKDAKIAKE 261
>sp|Q8TZ98|PELO_METKA Protein pelota homolog OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=pelA PE=3 SV=1
Length = 353
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 26/288 (9%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSR--DA 58
MK++ ++L G +++ P DDLW Y+++ GD V A+ R+V + A R
Sbjct: 1 MKVVEKDL---DKGYIEVLPETLDDLWHLYHVVRKGDLVFALERRRVKDERAETIRRDKG 57
Query: 59 ERVKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWD 118
ER + L ++VE V++DK + LRI+G ++E+ + G+ HT+ + + + KD W+
Sbjct: 58 ERKPVYLGVRVEDVEFDKYANRLRIKG--VIEH-GPESGSHHTVNVTTGKRIKIVKDEWE 114
Query: 119 SLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTI-TRSRIETSIPRKHGPAIAG 177
L+ + +A L V EG I+ R + +R+ ++P K G
Sbjct: 115 RKDLERIEEAEMSRPPVMLVAVDTGEGTIGIV---RDYGLDVVARVRHNVPGKRG---GD 168
Query: 178 YESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENK 237
+ + KFF + + + V V+ PGF K F L E R + +E+
Sbjct: 169 RRAEMRKFFHRLADEIERIAEEEGVEHIVVGGPGFVKSDFAEFL---REERDIPAHVED- 224
Query: 238 SRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNML 285
T S + L E++ V +++++ A+EV+ L++ F +
Sbjct: 225 -------TGSAGEAGLIEMIRRGAVERAVEESRVAEEVKHLEEVFKRI 265
>sp|Q8PVZ0|PELO_METMA Protein pelota homolog OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=pelA
PE=3 SV=1
Length = 350
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 136/294 (46%), Gaps = 36/294 (12%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD--- 57
M++ R+L + G + + DDLW +I GD V A+T RK A + D
Sbjct: 1 MRVTNRSL-KGREGEIAVTAETLDDLWHLKYIIEKGDMVFALTRRK-----ADSASDKLR 54
Query: 58 ---AERVKLKLEIKVEVVDYDKEGSVLRIRGKNILENEH-VKIGAFHTLEIELHRAFVLR 113
E+VK++L I+VE +++ K + LRI G EH + G++HTL +E+ +
Sbjct: 55 PEKVEKVKVRLGIRVEELEFHKFANRLRIHGPI----EHGMDTGSYHTLNVEIGTNISII 110
Query: 114 KDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGP 173
K+ W + L + A + + +V ++EG A I V S I S ++
Sbjct: 111 KEHWKNDQLQRIQDAEEAGKRPKVVIVAVEEGDADIGFVRHYGIEVYSHIRQSSGKR--- 167
Query: 174 AIAGYESAL-NKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRP 232
E+ L N+FF +++ V + VIA PGFTK+ F ++ +
Sbjct: 168 -----ETGLRNEFFREIVEQLRHAVPEDA--SIVIAGPGFTKEDFLKYFNETESEMASKA 220
Query: 233 IIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLT 286
+ E+ S I + SG++ EVL V ++++++ A+E ++D ++
Sbjct: 221 LTEDTSMIGM----SGFQ----EVLRRGAVDRIMQESRIARESSLMEDLIREIS 266
>sp|Q46C69|PELO_METBF Protein pelota homolog OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=pelA PE=3 SV=1
Length = 350
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 137/293 (46%), Gaps = 34/293 (11%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD--- 57
M++ R+L + G + + DDLW +I GD V +VT RK A + D
Sbjct: 1 MRVTNRSL-KGREGEIAVTAETLDDLWHLKYIIEKGDLVFSVTKRK-----ADSASDKIR 54
Query: 58 ---AERVKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRK 114
E+VK++L I+V+ +++ K + LR+ G + + +G++HTL IE+ + K
Sbjct: 55 PEKVEKVKVRLGIRVDDLEFHKFANRLRLHG---MIERGMDVGSYHTLNIEIGTNLSVIK 111
Query: 115 DLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPA 174
+ W + L + A + + + +V ++EG A I V S I S ++
Sbjct: 112 EHWKNDQLQRIKDAEEASKRPKVVMVAIEEGDADIGFVHHYGIEIYSHIRQSSGKR---- 167
Query: 175 IAGYESAL-NKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPI 233
E+ L N+FF V++ V VIA PGFTK+ F ++ + +
Sbjct: 168 ----ETGLRNEFFREVVEQLRHAVPEEA--SIVIAGPGFTKEDFIKYFQETEPAMASKAL 221
Query: 234 IENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLT 286
IE+ S I + SG++ EVL V ++++++ A+E ++D ++
Sbjct: 222 IEDTSMIGM----SGFQ----EVLRRGAVDRIMQESRIARESALMEDLIREIS 266
>sp|Q9HJ74|PELO_THEAC Protein pelota homolog OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=pelA PE=1 SV=1
Length = 339
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQM-ASGSRDAE 59
M+IL +L +N +++E +D DLW+ N+++ GD V A+T R+V SR+ E
Sbjct: 1 MRILEEDL-KNSTYRIRIESLD--DLWYLRNILSEGDEVSAITFRRVEESADVQRSRERE 57
Query: 60 RVKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDS 119
R+ + + +KVE +++ + LRI G I E K G ++ + + + K+ WD
Sbjct: 58 RIPITIRLKVEKIEFQDFDNRLRILGTVIEGPEDTK-GKHQSITVTVDSEISITKE-WDD 115
Query: 120 LALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYE 179
+D L +A D V M E A I L+ ++ T + G G
Sbjct: 116 QHIDLLKEATDEKYVTVYTAVAMDEDEAQIFLI---HPYGIQQVGTVYSGRSGKYAEGNY 172
Query: 180 SALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHL 221
S + +F+ ++ A LK N +I PGF +D+F R+
Sbjct: 173 SEAS-YFDQIVNA-LK----NYSNSIIILGPGFARDRFARYC 208
>sp|B9LQI7|PELO_HALLT Protein pelota homolog OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=pelA PE=3 SV=1
Length = 355
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 131/286 (45%), Gaps = 28/286 (9%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLR---QMASGSRD 57
M+I R E G + + P + DDLW +++ PGD V T R++ R QM RD
Sbjct: 1 MRISDRGYGEEGRERLTLVPENVDDLWHLAHVLEPGDLVEGDTTRRIQRNDDQM----RD 56
Query: 58 --AERVKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKD 115
+R L + ++V+ V++ + + LR+ G + + ++ A HT+ +E H + K
Sbjct: 57 TGGQREHLFVTLQVDEVEFARFANRLRVSGVIVGCSREDQLNAHHTINVEEHDEITVEKH 116
Query: 116 LWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAI 175
+ + L +A + + D+A+ ++EG A++ V + T + + P G
Sbjct: 117 -FKPDQTERLEEATEAAENPDVAIATVEEGAAYVHTVQQYGTEEYASF--TKPTGKGD-- 171
Query: 176 AGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIE 235
Y + F + +A L H+D + V ++A PGFTK ++ E R L
Sbjct: 172 --YSRPREELFAELGEA-LAHLDADAV---ILAGPGFTKQDALDYIT--EEYRDL----- 218
Query: 236 NKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDF 281
RI V TS+ + EVL V + K+T+ ++E + D
Sbjct: 219 -ADRITTVDTSAAGDRGVHEVLKRGAVDEVQKETRISKEATLIDDL 263
>sp|Q8TSZ1|PELO_METAC Protein pelota homolog OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=pelA PE=3 SV=1
Length = 350
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 135/294 (45%), Gaps = 36/294 (12%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD--- 57
M++ R+L G + + DDLW +I GD V A+T RK A + D
Sbjct: 1 MRVTNRSL-RGREGEIAITAETLDDLWHLKYIIEKGDLVFALTKRK-----ADSASDKLR 54
Query: 58 ---AERVKLKLEIKVEVVDYDKEGSVLRIRGKNILENEH-VKIGAFHTLEIELHRAFVLR 113
E+VK++L I+VE +++ K + LRI G EH + +G++HTL +E+ +
Sbjct: 55 PEKVEKVKVRLGIRVEEMEFHKFANRLRIHGPI----EHGMDVGSYHTLNVEIGTNISII 110
Query: 114 KDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGP 173
K+ W + L + A + + +V ++EG A I V S I S ++
Sbjct: 111 KERWKNDQLQRIQDAEEAGKRPKVVIVAVEEGDADIGFVRHYGIEVYSHIRQSSGKR--- 167
Query: 174 AIAGYESAL-NKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRP 232
E+ L ++FF ++ V + VIA PGFTK+ F ++ +
Sbjct: 168 -----ENGLRSEFFREIVDQLRHAVPEDA--SIVIAGPGFTKEDFLKYFHETEPEMASKA 220
Query: 233 IIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLT 286
+ E+ S I + SG++ EVL V ++++++ A+E ++D ++
Sbjct: 221 LTEDTSMIGM----SGFQ----EVLRRGAVDRIMQESRIARESSLMEDLLREIS 266
>sp|A0B6U3|PELO_METTP Protein pelota homolog OS=Methanosaeta thermophila (strain DSM 6194
/ PT) GN=pelA PE=3 SV=2
Length = 347
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 130/299 (43%), Gaps = 44/299 (14%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD--- 57
M++++RNL G + + DDLW +L++PGD V A T RK+ SG+ D
Sbjct: 1 MRVIKRNL-RGDEGEISLVAESLDDLWHLKHLVSPGDLVFATTQRKI-----SGATDKLR 54
Query: 58 ---AERVKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRK 114
AER ++L I VE V++ + LRI G + V IG++HTL IE + K
Sbjct: 55 PEKAERRTVRLGISVEAVEFHTYSNWLRIHG---VIKSGVDIGSYHTLNIEAGSELSIIK 111
Query: 115 DLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPA 174
W L + +A + + + L++EG A I ++ + T + I
Sbjct: 112 -RWRPDELQRIEEAVAESNRPRVVLALVEEGEATIGVLRQFGVQTVAEIRG--------- 161
Query: 175 IAGYESALNKFFENVLQAFLKHVDFNVVRCA------VIASPGFTKDQFHRHLLLEAERR 228
+ +V FLK V + A V+A PGFTK+ + ++EA
Sbjct: 162 -----GSGKGSGSSVRDDFLKEVADQIANSAGDDAYVVLAGPGFTKEDLRK--VMEARYP 214
Query: 229 QLRPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTN 287
L R+ + SS + +EVL V +++ ++ ++E + + D +
Sbjct: 215 DL------LKRLTMDDASSTGRSGFQEVLRRGTVDRIVEASRISRETRLMDDLMKEIAT 267
>sp|Q12W71|PELO_METBU Protein pelota homolog OS=Methanococcoides burtonii (strain DSM
6242) GN=pelA PE=3 SV=1
Length = 347
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 119/260 (45%), Gaps = 28/260 (10%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD--- 57
M++ +R+L N G + + P DDLW +I GD V ++T RK A + D
Sbjct: 1 MRVTKRDLKHNREGEISLTPETLDDLWHLKYIIEKGDLVFSLTKRK-----ADNAADKLR 55
Query: 58 ---AERVKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRK 114
AE+ ++L ++VE V++ K + LR+ G L + G +HTL IE + K
Sbjct: 56 PEKAEKKTVRLGVRVEDVEFHKFSNRLRVHG---LIEHGMDAGFYHTLNIEDGTNLSITK 112
Query: 115 DLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPA 174
W L+ +++A + + +V ++EG A I V R I I + I + G
Sbjct: 113 -YWKKDQLERVNEAEAASKRPKVILVAIEEGDADIGFV-RHYGI---EIYSHITQSSGKG 167
Query: 175 IAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPII 234
E L + F + + L H + V++ PGFTKD F ++ + ++
Sbjct: 168 ----EGTLREVFFSTILDQLTHA-MSGTESVVVSGPGFTKDDFMKYASSKNSDLVAGILV 222
Query: 235 ENKSRIILVHTSSGYKHSLR 254
E+ S I + SG++ LR
Sbjct: 223 EDTSSIGM----SGFQEVLR 238
>sp|Q4JCI0|PELO_SULAC Protein pelota homolog OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=pelA PE=3 SV=1
Length = 342
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 131/286 (45%), Gaps = 28/286 (9%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MKIL N + GS+K+ + DDLW + +I GD ++A T R + S +D+ R
Sbjct: 1 MKILEFN---DKRGSLKLHVENEDDLWLLHIIIKKGDRIVAKTTRDI-----SMGKDSRR 52
Query: 61 VKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKI-GAFHTLEIELHRAFVLRKDLWDS 119
+ + +E++VE ++ + LRI G + E I GA HT+ +++ ++ K+ W +
Sbjct: 53 IPMTIELQVEYTEFQNFTTRLRIHGLILDAPERFGIKGAHHTVNLDIGDEVIIIKEQWSN 112
Query: 120 LALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYE 179
L+ + + + +A+V + E + +L+ + ++T P K +
Sbjct: 113 YELEKIREQEEKKGKLLIALVDVDEYIIALLMKQGVKILAEKSLQT--PGKDNDVV---- 166
Query: 180 SALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 239
N+ E + + V V +IA PG KD ++ + +Q I+NK
Sbjct: 167 ---NENIEEMANEIISFVKLTGVNVIIIAGPGPFKDMVNQKI------KQ----IDNKLI 213
Query: 240 IILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNML 285
+ + SS + L E+L + + ++ + AQ+++ L+ L
Sbjct: 214 VYVDSVSSASRAGLNELLRRDIIDQVYREFEIAQQLKILESIMENL 259
>sp|B8GIR5|PELO_METPE Protein pelota homolog OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=pelA PE=3 SV=1
Length = 340
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 9 VENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGS---RDAERVKLKL 65
+ G G +++ P DD+W +LIAPGD V A T R V + A+ AE+ +++
Sbjct: 8 IRQGYGEIRLFPESVDDIWHLSHLIAPGDLVFAQTFRSV--ETATDKLRPEKAEKRPVRI 65
Query: 66 EIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELH-RAFVLRKDLWDSLALDT 124
I+VE V++ + S LR+ G L +G++HTL +E + V+R W +
Sbjct: 66 GIRVEKVEFHQYSSRLRVTG---LIESGPDVGSYHTLNLEPNFEVSVIR--FWSKSDRER 120
Query: 125 LHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNK 184
+ +A + + S + V+ ++EG A + I + E + G +
Sbjct: 121 VDRAVNSSGSGLVHVLAIEEGEAELF------RIRQYGPEQVLTITMGSGKGAPVDSREG 174
Query: 185 FFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVH 244
FF L+ + +IA PGF KD F R L + P I S ++V
Sbjct: 175 FFIEAATPLLQ-----ITGPVIIAGPGFIKDDFARFL------KNRYPAIAANS--MVVE 221
Query: 245 TSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKD 280
T + +++EV+ + + D + +EVQ + +
Sbjct: 222 TRRIGRGAVQEVIGQGVIGKIAGDLQLGREVQVMDE 257
>sp|A3CU20|PELO_METMJ Protein pelota homolog OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=pelA PE=3 SV=1
Length = 341
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 124/270 (45%), Gaps = 29/270 (10%)
Query: 14 GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVK---LKLEIKVE 70
G +++ P DDLW +L+ PGD V A T R V + A+ E+V+ ++L I VE
Sbjct: 13 GEIRLFPETLDDLWHLSHLVGPGDLVFATTFRSV--EAATDKLRPEKVEKRPVRLGIWVE 70
Query: 71 VVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAAD 130
V++ + + LRI G I+E+ V + A HTL +E + K W + + + +A D
Sbjct: 71 KVEFHQHTNRLRIAG--IIES-GVDVAAHHTLNVEAGFEISVVKR-WRPVDCERIRRAVD 126
Query: 131 PTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVL 190
+A + VV ++EG A I R + T A G SAL FE L
Sbjct: 127 ASAYGVVHVVSVEEGEAQIY---RLRQFGPEWVTTVTAGSSKGADTGTRSAL---FEKTL 180
Query: 191 QAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYK 250
V V+A PGF KD+F ++ + A + R++ V T +
Sbjct: 181 DTVAA-----VTGPLVVAGPGFVKDEFAEYVKVRAP--------DLAGRMVAVETRRIGR 227
Query: 251 HSLREVLDAPNVMNMIKDTKAAQEVQALKD 280
+++EV+ + ++ D A+EV AL D
Sbjct: 228 GAVQEVIGQGILDRLLGDLHLAREV-ALMD 256
>sp|Q2FQH4|PELO_METHJ Protein pelota homolog OS=Methanospirillum hungatei (strain JF-1 /
DSM 864) GN=pelA PE=3 SV=1
Length = 341
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 134/279 (48%), Gaps = 42/279 (15%)
Query: 14 GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD------AERVKLKLEI 67
G +++ P +SDDLW +NLI PG V A T+R V GS+D E+ ++L I
Sbjct: 13 GEIRLFPENSDDLWHLHNLITPGSLVYATTLRSV-----EGSQDKIRPEKQEKRPVRLGI 67
Query: 68 KVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQ 127
+VE V++ + LR+ G +E+ V IG+ HTL +E + K W L+ + +
Sbjct: 68 RVEDVEFHEYSIRLRVFG--TIES-GVDIGSHHTLNLEPGYEISVIKS-WSGSDLERIDR 123
Query: 128 AADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGY-ESALNKFF 186
A + S + ++ ++EG A + R+++ P++ AG ++A
Sbjct: 124 AIKGSTSEAIHILTVEEGEAELY-----------RVQSYGPKQVWSLAAGSGKTAEVSSR 172
Query: 187 ENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR---IILV 243
E +A + V + VIA PGF K++ ++ + +R+ N SR +++
Sbjct: 173 EEFSEAVVSQVS-QLTGPLVIAGPGFVKEE----IIAKFKRK-------NPSRSAPLVIG 220
Query: 244 HTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFF 282
T +G + +++EV+ + + D + A+EV L +
Sbjct: 221 DTRAGGRRAVQEVIGQGILEKLNGDLQLAREVTCLDELM 259
>sp|Q18J81|PELO_HALWD Protein pelota homolog OS=Haloquadratum walsbyi (strain DSM 16790)
GN=pelA PE=3 SV=1
Length = 355
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 127/290 (43%), Gaps = 28/290 (9%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD--A 58
M+I R E G + P + DDLW +++ PGD V T R++ R + RD
Sbjct: 1 MRIPSRGRGEEGKEQWTLVPENVDDLWHLSHVLEPGDRVGGDTTRRIQRNDEN-LRDTGG 59
Query: 59 ERVKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWD 118
+R L + I+V V++ + + LR+ G+ I + ++G +HTL +E H ++ K
Sbjct: 60 QREHLVVTIEVADVEFARFANRLRVGGEIISCSREDELGHYHTLNVESHDEIIVTK---- 115
Query: 119 SLALDT---LHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAI 175
A D + A + +AD+AV ++EG AHI T+ + E R
Sbjct: 116 KFAPDQRKRIEAAEEAAENADVAVATIEEGEAHI------HTVAQYGTEEQFSRTATTGK 169
Query: 176 AGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIE 235
Y + F A L +D + + ++A PGFTK ++ + P I
Sbjct: 170 GEYSQPRTELFAE-FAAALSRMDVDAI---ILAGPGFTKQDAEEYI------QSNNPEII 219
Query: 236 NKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNML 285
+K + +V T++ + EVL V + T+ + E + + + +
Sbjct: 220 DK--LTIVDTAAVGDRGVHEVLKRGAVDEVQTQTRISAEAELIDELMEGI 267
>sp|A9A8K6|PELO_METM6 Protein pelota homolog OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=pelA PE=3 SV=1
Length = 348
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 129/274 (47%), Gaps = 21/274 (7%)
Query: 16 VKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD-AERVKLKLEIKVEVVDY 74
+K+ P + DDLW N+I P +++ AVT R+ + D + ++ L IK E +++
Sbjct: 13 IKLIPENLDDLWHLSNIIQPYNAIYAVTERRTEDKGDKLRADRGTKRRVFLGIKAEKINF 72
Query: 75 DKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTAS 134
++ + LR+ GK I + + IG++HT++IE ++K+ W L L A D +
Sbjct: 73 HEDFNRLRVSGKIIHAPDDIPIGSYHTIDIEPLLQVSVQKN-WKKWDLARLKDAEDSSKK 131
Query: 135 ADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFL 194
+ VV+M + A I LV + I++ I +K E A ++ +++ +
Sbjct: 132 PKVVVVIMDDSEADIFLVREFGIKELASIKSGISKKLD--YKQNEQAKFSYYSDIINSIS 189
Query: 195 KHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRP--IIENKSRIILVHTSSGYKHS 252
++ + A PGF K+ + + + + L P +IE+ + HT K
Sbjct: 190 EYEG-----KILFAGPGFGKNNIQNY--ISEKHKDLAPNVVIESAN-----HTG---KSG 234
Query: 253 LREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLT 286
L E+L + + + + + ++E Q ++ ++
Sbjct: 235 LSEILKSGIIDKIYGEARISKETQIIEKLLEEIS 268
>sp|A6VI74|PELO_METM7 Protein pelota homolog OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=pelA PE=3 SV=1
Length = 348
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 127/272 (46%), Gaps = 17/272 (6%)
Query: 16 VKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD-AERVKLKLEIKVEVVDY 74
+K+ P + DDLW N+I P +++ AVT R+ + D + K+ L IK E +++
Sbjct: 13 IKLIPENLDDLWHLSNIIQPYNAIYAVTERRTEDKGDKLRADRGTKRKVFLGIKAEKINF 72
Query: 75 DKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTAS 134
++ + LR+ GK I E + IG++HT++IE ++K+ W L L A D +
Sbjct: 73 HEDFNRLRVSGKIIHAPEDIPIGSYHTIDIEPLLQVSVQKN-WKKWDLARLKDAEDSSKK 131
Query: 135 ADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFL 194
+ VV+M + A I LV + I++ + +K E A ++ +++ + +
Sbjct: 132 PKVVVVIMDDSEADIFLVREFGIKELASIKSGVSKKLD--YKQNEQAKFSYYSDIINS-I 188
Query: 195 KHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLR 254
+ + + A PGF K+ + + + + L P +++ + K L
Sbjct: 189 SEFEGKI----LFAGPGFGKNNIQNY--ISEKHKDLAP------NVVVESANHTGKSGLS 236
Query: 255 EVLDAPNVMNMIKDTKAAQEVQALKDFFNMLT 286
E+L + + + + + ++E Q ++ ++
Sbjct: 237 EILKSGIIDKIYGEARISKETQIIEKLLEEIS 268
>sp|Q9HPR5|PELO_HALSA Protein pelota homolog OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=pelA PE=3 SV=1
Length = 357
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 127/295 (43%), Gaps = 37/295 (12%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLR---QMASGSRD 57
M++ R+ VE G + + P DDLW ++ PGD V T R++ R QM
Sbjct: 1 MQLKDRHTVEGGRERITLVPESLDDLWHLAYVLEPGDFVAGDTHRRIQRNDDQMRDTG-- 58
Query: 58 AERVKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLW 117
ER + + I V V++ K + LR+ G + ++G HTL + + K W
Sbjct: 59 GEREHMFVTIDVGDVEFHKFSNRLRVSGTIEDCSREDQLGLHHTLNVAEREELEVEKH-W 117
Query: 118 DSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGR-------SMTITRSRIETSIPRK 170
L+ L++A + T D+A+ ++EG AHI +V + S T T + E +
Sbjct: 118 QPDQLNRLNEAVEATDQPDVAIATVEEGEAHIHVVQQYGVDEQGSFTATTGKGEQN---- 173
Query: 171 HGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQL 230
+ ++ F + A + ++A PGFTK H+ E
Sbjct: 174 --------DRGRDELFGTLADALARM----QADAIILAGPGFTKQDALDHITEEY----- 216
Query: 231 RPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNML 285
P ++ I +V TS+ + EVL V ++ ++T+ A+E + + + +
Sbjct: 217 -PDLQET--ITMVDTSAVGGRGVHEVLKRGAVEDVQEETRIAEESELIDELTTQM 268
>sp|B0R5R9|PELO_HALS3 Protein pelota homolog OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=pelA PE=3 SV=1
Length = 357
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 127/295 (43%), Gaps = 37/295 (12%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLR---QMASGSRD 57
M++ R+ VE G + + P DDLW ++ PGD V T R++ R QM
Sbjct: 1 MQLKDRHTVEGGRERITLVPESLDDLWHLAYVLEPGDFVAGDTHRRIQRNDDQMRDTG-- 58
Query: 58 AERVKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLW 117
ER + + I V V++ K + LR+ G + ++G HTL + + K W
Sbjct: 59 GEREHMFVTIDVGDVEFHKFSNRLRVSGTIEDCSREDQLGLHHTLNVAEREELEVEKH-W 117
Query: 118 DSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGR-------SMTITRSRIETSIPRK 170
L+ L++A + T D+A+ ++EG AHI +V + S T T + E +
Sbjct: 118 QPDQLNRLNEAVEATDQPDVAIATVEEGEAHIHVVQQYGVDEQGSFTATTGKGEQN---- 173
Query: 171 HGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQL 230
+ ++ F + A + ++A PGFTK H+ E
Sbjct: 174 --------DRGRDELFGTLADALARM----QADAIILAGPGFTKQDALDHITEEY----- 216
Query: 231 RPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNML 285
P ++ I +V TS+ + EVL V ++ ++T+ A+E + + + +
Sbjct: 217 -PDLQET--ITMVDTSAVGGRGVHEVLKRGAVEDVQEETRIAEESELIDELTTQM 268
>sp|A6UUY1|PELO_META3 Protein pelota homolog OS=Methanococcus aeolicus (strain Nankai-3 /
ATCC BAA-1280) GN=pelA PE=3 SV=1
Length = 348
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 121/262 (46%), Gaps = 17/262 (6%)
Query: 16 VKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD-AERVKLKLEIKVEVVDY 74
+K+ P + DDLW N+I ++V A+T R+ + D + ++ L +K E + +
Sbjct: 13 IKVMPENLDDLWHLSNIILKNNAVSAMTERRTEDKGDKLRADRGTKRRVYLGVKAEKIKF 72
Query: 75 DKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTAS 134
D+ + LR+ G I E V IG++HT++IE + ++K+ W L L A +
Sbjct: 73 DENTNRLRVSGPIIHGPEDVPIGSYHTIDIEPLKDVSIQKN-WKKWDLQRLKDAENSAKK 131
Query: 135 ADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFL 194
+ VV+M + A + ++ I++ + +K E+ ++ +L+
Sbjct: 132 PKIIVVIMDDSDATVFIIRDYGVKEIGHIKSRLSKKLDYKRQDQENI--NYYNEILEVMS 189
Query: 195 KHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLR 254
+ ++A PGFTK+ F ++ L E + L+ R++ T+ + L
Sbjct: 190 PYEG-----KILVAGPGFTKNNFQKY-LSEKHKDMLQ-------RVVFESTNHTGRLGLA 236
Query: 255 EVLDAPNVMNMIKDTKAAQEVQ 276
EVL + V + + + ++E Q
Sbjct: 237 EVLKSGIVDRIYGEARLSKETQ 258
>sp|O29421|PELO_ARCFU Protein pelota homolog OS=Archaeoglobus fulgidus (strain ATCC 49558
/ VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=pelA
PE=1 SV=1
Length = 344
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 19/218 (8%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSR-DAE 59
M+I+ NL +N G +K+ P DDLW +I GD V A T R Q + R D E
Sbjct: 1 MQIVEENLRDN-EGEIKLIPETLDDLWHLRFIIEKGDVVFATTKRA--SQSSDKLRSDKE 57
Query: 60 RVKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDS 119
V ++L I+VE V++ + + LR+ GK + ++ +HTL I + + + K W
Sbjct: 58 MVTVRLGIEVEKVEFHRFANRLRVSGKIVA---GIEESGYHTLNITVGKELSIIKK-WKP 113
Query: 120 LALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYE 179
L+ L +A + + ++ ++ ++EG A + + + +E + G G
Sbjct: 114 EQLERLRRAVEDSNRPEIVMLTIEEGYAV------AGVLRQWGVEEIFEERMGYG-KGMG 166
Query: 180 SALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQF 217
+ +FF V A L+ DF + ++A PGF K+ F
Sbjct: 167 DSRKEFFGEV-AAKLESFDFKYL---IVAGPGFAKNDF 200
>sp|B8D691|PELO_DESK1 Protein pelota homolog OS=Desulfurococcus kamchatkensis (strain
1221n / DSM 18924) GN=pelA PE=3 SV=1
Length = 356
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 131/295 (44%), Gaps = 41/295 (13%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
M++L +L NG + +E D DDLW + ++ GD V A T R+V SR R
Sbjct: 1 MRVLEEDL-RNGYIRILVE--DIDDLWILFMVLRKGDIVYARTSREVKPGEGGSSR---R 54
Query: 61 VKLKLEIKVEVVDYDKEGSVLRIRGKNILENEHVKI-GAFHTLEIELHRAFVLRKDLWDS 119
+ + L ++VE +++ + LRIRG + E + G +HT+ I + + ++ W
Sbjct: 55 IPMVLGLRVEAIEFQEFTEKLRIRGIVVEGPEEFGVKGHYHTIAIGVGDQLAIVRETWSK 114
Query: 120 LALDTLHQA---------ADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRK 170
+LD L + + SA +A VL ++G+ H S I++ +P K
Sbjct: 115 HSLDILKKGVRRRRILLVSIDYDSACIA-VLTEQGVKH-----------HSEIQSDLPGK 162
Query: 171 HGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQL 230
+E L+++ V A + + +IA PG K++ ++ RR
Sbjct: 163 M--YRVEHEEILDEYLSKVASALNNVIQQEEIDAVIIAGPGDLKNKLGENI-----RR-- 213
Query: 231 RPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNML 285
+N+ + L TS+G + E+L V ++ D + + +++F ++
Sbjct: 214 ----DNRKHVYLDTTSTGGCQGISELLGRDVVKQVVGDLSIVKAKEVVEEFKRLI 264
>sp|Q6M133|PELO_METMP Protein pelota homolog OS=Methanococcus maripaludis (strain S2 /
LL) GN=pelA PE=3 SV=1
Length = 348
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 129/272 (47%), Gaps = 17/272 (6%)
Query: 16 VKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD-AERVKLKLEIKVEVVDY 74
+K+ P + DDLW ++I P +++ AVT R+ + D + ++ L IK E +++
Sbjct: 13 IKLIPENLDDLWHLSHIIQPYNAIYAVTERRTEDKGDKLRADRGTKRRVFLGIKAEKINF 72
Query: 75 DKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTAS 134
++ + LR+ GK I + + IG++HT++IE ++K+ W ++ L +A D +
Sbjct: 73 HEDFNRLRVSGKIIHAPDDIPIGSYHTIDIEPFLQVSVQKN-WKKWDIERLKEAEDSSKK 131
Query: 135 ADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFL 194
+ VV+M + A I LV + I++ + +K E A ++ +++ + +
Sbjct: 132 PKVVVVIMDDSEADIFLVREFGIKELASIKSGVSKKLD--YKQNEQAKFSYYSDIINS-I 188
Query: 195 KHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLR 254
+ + + A PGF ++ + + + + L P +++ + K L
Sbjct: 189 SEFEGKI----LFAGPGFGRNNIQNY--ISEKYKSLAP------NVVVESANHTGKSGLS 236
Query: 255 EVLDAPNVMNMIKDTKAAQEVQALKDFFNMLT 286
E+L + + + + + ++E Q ++ ++
Sbjct: 237 EILKSGIIDKIYGEARISKETQVVEKLLEEIS 268
>sp|A4G0A4|PELO_METM5 Protein pelota homolog OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=pelA PE=3 SV=1
Length = 348
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 126/276 (45%), Gaps = 25/276 (9%)
Query: 16 VKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD-AERVKLKLEIKVEVVDY 74
+K+ P + DDLW N+I P +++ AVT R+ + D + ++ L IK E +++
Sbjct: 13 IKLIPENLDDLWHLSNIIQPYNAIYAVTERRTEDKGDKLRADRGTKRRVFLGIKAEKINF 72
Query: 75 DKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTAS 134
++ + LR+ GK I + + IG++HT++IE ++K+ W L L +A D +
Sbjct: 73 HEDFNRLRVSGKIIHAPDDIPIGSYHTIDIEPLLQVSVQKN-WKKWDLVRLKEAEDSSKK 131
Query: 135 ADLAVVLMQEGLAHILLVG----RSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVL 190
+ VV++ + A I LV + + +S + + K E A ++ +++
Sbjct: 132 PKVVVVILDDSEADIFLVREFGIKELVSIKSGVSKKLDYKQN------EQAKFSYYSDII 185
Query: 191 QAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYK 250
+ + + A PGF K+ + + + + L P +++ + K
Sbjct: 186 NSISEFEG-----KILFAGPGFGKNNIQNY--ISEKHKDLAP------NVVVESANHTGK 232
Query: 251 HSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLT 286
L E+L + + + + + ++E Q ++ ++
Sbjct: 233 SGLSEILKSGIIDKIYGEARISKETQVIEKLLEEIS 268
>sp|A6UR75|PELO_METVS Protein pelota homolog OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=pelA PE=3 SV=1
Length = 348
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 131/277 (47%), Gaps = 19/277 (6%)
Query: 16 VKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD-AERVKLKLEIKVEVVDY 74
+K+ P + DDLW +++ ++V +VT R+ + D + ++ L IKVE V +
Sbjct: 13 IKVMPENLDDLWHLSHIVQAYNAVYSVTERRTEDKGDKLRADRGTKRRVFLGIKVEKVSF 72
Query: 75 DKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTAS 134
+E + LR+ GK I E + IG++HTL+IE ++K+ W L L +A +
Sbjct: 73 HEEVNRLRVSGKIIHAPEDIPIGSYHTLDIEPFTQISIQKN-WKKWDLTRLKEAEESGKR 131
Query: 135 ADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKF-FENVLQAF 193
+ VV++ + A I V + I++ + ++ I ++ K+ + N +
Sbjct: 132 PKVVVVILDDSEADIFTVRDFGVKELASIKSGVSKR----IDSKQNEQAKYLYYNEIITT 187
Query: 194 LKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSL 253
L D + + A PGF+K+ ++ +E+ + + S+I++ T+ + L
Sbjct: 188 LSEFDGKI----LFAGPGFSKNNIQNYI---SEKHK-----DLASKIVIESTNHTGRLGL 235
Query: 254 REVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNVRF 290
E+L + + + + + ++E Q ++ ++ R
Sbjct: 236 SEILKSGIIDRIYGEARLSKESQIIEKLLEEISKKRL 272
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,230,482
Number of Sequences: 539616
Number of extensions: 3938554
Number of successful extensions: 11022
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 10839
Number of HSP's gapped (non-prelim): 88
length of query: 292
length of database: 191,569,459
effective HSP length: 116
effective length of query: 176
effective length of database: 128,974,003
effective search space: 22699424528
effective search space used: 22699424528
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)