BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022776
(292 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359492238|ref|XP_002279957.2| PREDICTED: uncharacterized protein LOC100259217 [Vitis vinifera]
gi|302142661|emb|CBI19864.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/352 (37%), Positives = 182/352 (51%), Gaps = 105/352 (29%)
Query: 1 MKSEIVAQELIHLLDAAKSDMVVGLKLREASLLKLMLEYTDDQLADFMAWFDLLRQKPKD 60
M+ + QE L++AAKSD+++GLK RE SL KL LE TDD+L DF D L + D
Sbjct: 69 MEMKFTVQEKERLVEAAKSDLLMGLKKREVSLCKLKLESTDDELVDFKVLIDFLSHECLD 128
Query: 61 -------------------------------------GEPK-------------SIEVSA 70
GE + S EVSA
Sbjct: 129 PNGISKVGDKEKGSRGDNNLKSVKTTKEEEQCAKRLEGEVRKLKWEYENLASRNSAEVSA 188
Query: 71 FLDERAFLWNQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAK 130
L E+ F+WNQYK+ME++ ++K+NSK EV++ANE+I+ LL EQL+ NNEKD+ I K
Sbjct: 189 LLAEQNFVWNQYKIMESNYSNKLNSKHVEVEQANEKIDNLLVGMEQLESLNNEKDDKIVK 248
Query: 131 LKTQIAQMETGSKKWNTEISRLTQELELLRKSRTASDTPVLNRCTRIAGATTSNAGDSVQ 190
LKT +A+MET +KK N EISRL++E+ELLRKSR+AS TP+LNRCT
Sbjct: 249 LKTDLAKMETETKKKNEEISRLSKEVELLRKSRSASVTPILNRCTE-------------- 294
Query: 191 NRSSTAGIKGRLRKSGSSSVTPLSNYSTTTAQSLGGKN----GDNVVVNKQMPAAQVPL- 245
+ T+G GKN G N+ + K+ PA++
Sbjct: 295 -KQKTSG---------------------------QGKNKSWIGRNISIKKETPASEKNTE 326
Query: 246 --------HVDSEKGTRSSKRKAVDVIPILDTPKLFSSKFKVPKLKNSFPHL 289
++EK +R SKRK ++V P +TP+LF+S FK+PKLKNS P +
Sbjct: 327 KKKESSVSEKNTEKKSRGSKRKEINVTPTSETPRLFTSTFKIPKLKNSSPQI 378
>gi|224083008|ref|XP_002306928.1| predicted protein [Populus trichocarpa]
gi|222856377|gb|EEE93924.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/324 (38%), Positives = 180/324 (55%), Gaps = 83/324 (25%)
Query: 1 MKSEIVAQELIHLLDAAKSDMVVGLKLREASLLKLMLEYTDDQLADFMAWFDLLRQK--- 57
+ ++V +++ +L+AAKSD+++GLK REASL K LE T+D+LADF AWF L Q
Sbjct: 70 INGDLVEKDMACVLEAAKSDLMLGLKQREASLHKSRLEETEDELADFQAWFSYLSQNLKA 129
Query: 58 ---------------PKDGEPKSI--------------------EVSAFLDERAFLWNQY 82
K G K + EVSA L E+ F+WNQY
Sbjct: 130 NSEETANGKGGGSSDMKSGGAKKLEAKVERLKLENEKLVSEKNSEVSALLKEKTFVWNQY 189
Query: 83 KVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETGS 142
++E++LTSK+ SK AEV++ANE+I ++LA+ E LQ SN+EKDE I +L ++A+ME +
Sbjct: 190 NILESNLTSKLRSKEAEVEKANEKIAEVLATAELLQSSNDEKDEIIRRLNMKVAKMEADA 249
Query: 143 KKWNTEISRLTQELELLRKSRTASDTPVLNRCTRIAGATTSNAGDSVQNRSSTAGIKGRL 202
+KW EIS+L+QELE +RKSR+A T ++ C S RSS G+K
Sbjct: 250 EKWKGEISKLSQELEFIRKSRSAQVTSIMKPC-------------SAPTRSSNLGVKS-- 294
Query: 203 RKSGSSSVTPLSNYSTTTAQSLGGKNGDNVVVNKQMPA---AQVPLHVDSEKGTRSSKRK 259
G+N N +V++++ A A VP S+KG+RS K+K
Sbjct: 295 ----------------------CGRNFSN-LVDRKVSAPILATVP-SKGSDKGSRSLKKK 330
Query: 260 AVDVIPILDTPKLFSSKFKVPKLK 283
+D IL+TPKLFSS F+VPK+K
Sbjct: 331 RID---ILETPKLFSSTFEVPKVK 351
>gi|118484708|gb|ABK94224.1| unknown [Populus trichocarpa]
Length = 357
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 177/319 (55%), Gaps = 83/319 (26%)
Query: 6 VAQELIHLLDAAKSDMVVGLKLREASLLKLMLEYTDDQLADFMAWFDLLRQK-------- 57
V +++ +L+AAKSD+++GLK REASL K LE T+D+LADF AWF L Q
Sbjct: 75 VEKDMACVLEAAKSDLMLGLKQREASLHKSRLEETEDELADFQAWFSYLSQNLKANSEET 134
Query: 58 ----------PKDGEPKSI--------------------EVSAFLDERAFLWNQYKVMEN 87
K G K + EVSA L E+ F+WNQY ++E+
Sbjct: 135 ANGKGGGSSDMKSGGAKKLEAKVERLKLENEKLVSEKNSEVSALLKEKTFVWNQYNILES 194
Query: 88 DLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNT 147
+LTSK+ SK AEV++ANE+I ++LA+ E LQ SN+EKDE I +L ++A+ME ++KW
Sbjct: 195 NLTSKLRSKEAEVEKANEKIAEVLATAELLQSSNDEKDEIIRRLNMKVAKMEADAEKWKG 254
Query: 148 EISRLTQELELLRKSRTASDTPVLNRCTRIAGATTSNAGDSVQNRSSTAGIKGRLRKSGS 207
EIS+L+QELE +RKSR+A T ++ C S RSS G+K
Sbjct: 255 EISKLSQELEFIRKSRSAQVTSIMKPC-------------SAPTRSSNLGVKS------- 294
Query: 208 SSVTPLSNYSTTTAQSLGGKNGDNVVVNKQMPA---AQVPLHVDSEKGTRSSKRKAVDVI 264
G+N N +V++++ A A VP S+KG+RS K+K +D
Sbjct: 295 -----------------CGRNFSN-LVDRKVSAPILATVP-SKGSDKGSRSLKKKRID-- 333
Query: 265 PILDTPKLFSSKFKVPKLK 283
IL+TPKLFSS F+VPK+K
Sbjct: 334 -ILETPKLFSSTFEVPKVK 351
>gi|255538940|ref|XP_002510535.1| conserved hypothetical protein [Ricinus communis]
gi|223551236|gb|EEF52722.1| conserved hypothetical protein [Ricinus communis]
Length = 354
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 179/323 (55%), Gaps = 77/323 (23%)
Query: 1 MKSEIVAQELIHLLDAAKSDMVVGLKLREASLLKLMLEYTDDQLADFMAWFDLLRQ---- 56
M ++ ++L LL AAKS++++GLK REASL KL LE T+D+LADF + F+ L Q
Sbjct: 62 MNDALMEKDLNCLLQAAKSNLMLGLKHREASLYKLKLEQTEDELADFRSCFNYLSQILEE 121
Query: 57 ------KPKDG-----------------------------EPKSIEVSAFLDERAFLWNQ 81
K K+G K+ E+SA L E++F+WNQ
Sbjct: 122 NPKESDKCKEGVEDSNLRSSGSKRLDNEVKRLKSEYEKLSSEKNSEISALLKEKSFVWNQ 181
Query: 82 YKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETG 141
Y V+E+ L+ K+ +K++EVD+AN +I K+LAS E LQ SNNEKDE +KLK ++ +ME
Sbjct: 182 YNVLESSLSDKLKTKQSEVDQANAKIAKVLASVELLQSSNNEKDEIFSKLKAKLTEMEVD 241
Query: 142 SKKWNTEISRLTQELELLRKSRTASDTPVLNRCTRIAGATTSNAGDSVQNRSSTAGIKGR 201
KW E SRL QELELL+KSR+A TP L C A A++ R
Sbjct: 242 RDKWKEENSRLLQELELLKKSRSAQVTPSLKHCNTGAKASS------------------R 283
Query: 202 LRKSGSSSVTPLSNYSTTTAQSLGGKNGDNVVVNKQM-PAAQVPLHVDSEKGTRSSKRKA 260
+ KS G++ NVVV K++ PA P D++KG+R SKRK
Sbjct: 284 VVKS-------------------NGRSRSNVVVKKELCPAKAAPPLKDADKGSRGSKRKE 324
Query: 261 VDVIPILDTPKLFSSKFKVPKLK 283
V+ I IL+TPKLFS+ FKVPKLK
Sbjct: 325 VETITILETPKLFSASFKVPKLK 347
>gi|356558093|ref|XP_003547342.1| PREDICTED: uncharacterized protein LOC100802663 [Glycine max]
Length = 383
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 172/344 (50%), Gaps = 97/344 (28%)
Query: 1 MKSEIVAQELIHLLDAAKSDMVVGLKLREASLLKLMLEYTDDQLADFMAWF--------- 51
M + ++E L+ AK+D +GLK REA++LK +LE+T+D+LADF AWF
Sbjct: 74 MNGMLTSEEKKRSLEVAKADFALGLKHREAAMLKWILEHTEDELADFKAWFEILSRKSSN 133
Query: 52 -----------DLLRQ-------KP---------------KD------GE------PKSI 66
DL ++ KP KD GE K
Sbjct: 134 GEDQGTSSKDTDLKKKGSTNRGNKPTRNNTAEKEKYSSEIKDEFSRLKGEYDKLALEKYS 193
Query: 67 EVSAFLDERAFLWNQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDE 126
EV+A L E+ F+WNQY +MEND K+ +K AEV++ANE+I+ L++S EQLQ EKD
Sbjct: 194 EVTALLAEKKFVWNQYNIMENDYADKLRTKEAEVEKANEKIKVLVSSMEQLQSEKYEKDS 253
Query: 127 TIAKLKTQIAQMETGSKKWNTEISRLTQELELLRKSRTASDT-PVLNRCTRIAGATTSNA 185
I++L++++A+ME +K+ N EIS L+ ELE LRK R T PVLN CT+ G +
Sbjct: 254 KISELQSKMAEMEAETKRLNKEISGLSVELESLRKFRNNQVTPPVLNHCTQ--GTKAPES 311
Query: 186 GDSVQNRSSTAGIKGRLRKSGSSSVTPLSNYSTTTAQSLGGKNGDNVVVNKQM--PAAQV 243
G NRS N+ K++ P A V
Sbjct: 312 GVVKSNRSRR-----------------------------------NMTSKKEICTPNAPV 336
Query: 244 PLHVDSEKG--TRSSKRKAVDVIPILDTPKLFSSKFKVPKLKNS 285
P SE G T+S KRK VIP DTPKLFSS FKVPKLK+S
Sbjct: 337 PAK-SSETGTKTKSMKRKEAPVIPTSDTPKLFSSSFKVPKLKSS 379
>gi|224065885|ref|XP_002301978.1| predicted protein [Populus trichocarpa]
gi|222843704|gb|EEE81251.1| predicted protein [Populus trichocarpa]
Length = 277
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 165/309 (53%), Gaps = 79/309 (25%)
Query: 13 LLDAAKSDMVVGLKLREASLLKLMLEYTDDQLADFMAWFDLLRQKPKD------------ 60
LL+AAK D+++GLK RE SL KL LE T+D+LADF A F L Q K+
Sbjct: 4 LLEAAKGDLMLGLKQREVSLHKLKLEQTEDELADFQALFGYLSQSLKENSEETANGKGPG 63
Query: 61 ------GEPKSI--------------------EVSAFLDERAFLWNQYKVMENDLTSKIN 94
GE K + EVSA + F+WNQY ++E++LT+K+
Sbjct: 64 HSDLKSGEAKKLEAEVERLKLENEKLVFEKNSEVSALQKGKNFVWNQYDILESNLTNKLR 123
Query: 95 SKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQ 154
K AEV++ANE+I ++LA+ E LQ SN+EK+E I +L T++A++E +KKW E S+L++
Sbjct: 124 IKEAEVEKANEKIAEVLATAELLQSSNDEKNEIIQRLNTKVAKIEADTKKWKEETSKLSR 183
Query: 155 ELELLRKSRTASDTPVLNRCTRIAGATTSNAGDSVQNRSSTAGIKGRLRKSGSSSVTPLS 214
ELELLRK RTA T V+ C S R+ T+G+K R
Sbjct: 184 ELELLRKLRTAQITTVMKPC-------------SAPVRTFTSGVKSCGR----------- 219
Query: 215 NYSTTTAQSLGGKNGDNVVVNKQMPAAQVPLHVDSEKGTRSSKRKAVDVIPILDTPKLFS 274
D +V++++ + VP D+EK RS K+K +D + + P+LFS
Sbjct: 220 ---------------DCNLVDRKVLQSAVP-SKDAEKSIRSLKKKRMDA-SVFEAPRLFS 262
Query: 275 SKFKVPKLK 283
S FK+PK+K
Sbjct: 263 SSFKIPKVK 271
>gi|449437422|ref|XP_004136491.1| PREDICTED: uncharacterized protein LOC101222062 [Cucumis sativus]
gi|449505782|ref|XP_004162567.1| PREDICTED: uncharacterized LOC101222062 [Cucumis sativus]
Length = 365
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 164/341 (48%), Gaps = 105/341 (30%)
Query: 1 MKSEIVAQELIHLLDAAKSDMVVGLKLREASLLKLMLEYTDDQLADFMAWFD-------- 52
M+ E+ Q++ A+KSD++ G+K E + +L +E+++ +L DF ++FD
Sbjct: 69 MRDELFLQDMERSFQASKSDLLAGMKQTELYVCRLKIEHSEAELEDFKSFFDDFIAHKNS 128
Query: 53 -----LLRQKPKDGEP----------------------------------------KSIE 67
LR + E KS E
Sbjct: 129 KLQESFLRSASEPAEANGGGEGGMSKFGNTDEVRRSEALESEVRRFRSEYEKLASEKSSE 188
Query: 68 VSAFLDERAFLWNQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDET 127
VSA + E F+WNQY V+E D +SK+ +K +E++RA+ ++E+LLA+ EQLQ SNNEKD+
Sbjct: 189 VSALVTENKFVWNQYNVIEADYSSKLKNKHSELERAHLKVEELLATLEQLQSSNNEKDDV 248
Query: 128 IAKLKTQIAQMETGSKKWNTEISRLTQELELLRKSRTASDTPVLNRCTRIAGATTSNAGD 187
IA L+ Q+ +MET S K EISRL+ +LE+ RKS A+ TPVL C
Sbjct: 249 IAMLRNQVGKMETDSFKLKDEISRLSHDLEVQRKSVNATATPVLKPC------------- 295
Query: 188 SVQNRSSTAGIKGRLRKSGSSSVTPLSNYSTTTAQSLGGKNG----DNVVVNKQMPAAQV 243
K LR SG LGGKNG NV+VNK +AQ
Sbjct: 296 -----------KAGLRTSG-----------------LGGKNGSRSRSNVIVNKDAYSAQ- 326
Query: 244 PLHVDSEKGTRSSKRKAVDVIPILDTPKLFSSKFKVPKLKN 284
P H ++ KR A D I TP+LF+S FKVPKLKN
Sbjct: 327 PSHSGNQM-----KRGAGD-ISDPGTPRLFTSSFKVPKLKN 361
>gi|15223725|ref|NP_173427.1| cytomatrix protein-like protein [Arabidopsis thaliana]
gi|28392994|gb|AAO41932.1| unknown protein [Arabidopsis thaliana]
gi|28827278|gb|AAO50483.1| unknown protein [Arabidopsis thaliana]
gi|332191798|gb|AEE29919.1| cytomatrix protein-like protein [Arabidopsis thaliana]
Length = 342
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 156/315 (49%), Gaps = 80/315 (25%)
Query: 1 MKSEIVAQELIHLLDAAKSDMVVGLKLREASLLKLMLEYTDDQLADFMAWFDLLR----- 55
M EI ++ LL+ KS+++ GLK ++ SL L LE++ D+L DF AWFD L
Sbjct: 69 MMKEIETTKMFQLLETYKSNLLCGLKEKDRSLCNLKLEHSLDELKDFKAWFDFLTLNTNV 128
Query: 56 ------------------------QKPKDGEPKSIEVSAFLDERAFLWNQYKVMENDLTS 91
+ K K EVS L E F WNQ+K +E++ T
Sbjct: 129 ESVSGNSEGTAIKSLEAKIRKLKLEYEKLASEKKCEVSDLLRENGFAWNQFKCIESEFTD 188
Query: 92 KINSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISR 151
K+ K E+ +AN +I L++ EQLQ SN EKDETI++LK ++A+MET S K + EIS+
Sbjct: 189 KLKRKDDEIVQANTKISSLISYQEQLQSSNQEKDETISRLKAKMAEMETNSTKKDEEISK 248
Query: 152 LTQELELLRKSRTASDTPVLNRCTRIAGATTSNAGDSVQNRSSTAGIKGRLRKSGSSSVT 211
LT++LE +KSR TPVL RCT++ + RS+
Sbjct: 249 LTRDLESAKKSRGF--TPVLTRCTKL------------EKRSN----------------- 277
Query: 212 PLSNYSTTTAQSLGGKNGDNVVVNKQMPAAQVPLHVDSEKGTRSSKRK-AVDVIP--ILD 268
G G ++ K AA +EK ++SSKRK A ++ P + +
Sbjct: 278 -------------GNTVGSHISTKKDKSAASTT----NEKVSKSSKRKRAKNMTPVSVSE 320
Query: 269 TPKLFSSKFKVPKLK 283
PKLF+S F++PKLK
Sbjct: 321 VPKLFTSTFRLPKLK 335
>gi|356533159|ref|XP_003535135.1| PREDICTED: uncharacterized protein LOC100812121 [Glycine max]
Length = 226
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 127/224 (56%), Gaps = 43/224 (19%)
Query: 67 EVSAFLDERAFLWNQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDE 126
EV+ L E+ F+WNQY VMEND K+ +K AEV++ANE+I+ L++S EQLQ N EKD
Sbjct: 37 EVTTLLAEKKFMWNQYNVMENDYADKLRTKEAEVEKANEKIKILVSSMEQLQSENYEKDS 96
Query: 127 TIAKLKTQIAQMETGSKKWNTEISRLTQELELLRKSRTASDTP-VLNRCTRIAGATTSNA 185
I++L++++A+ME +K+ N EIS L+ ELE LRK R + TP VLNRCT A S
Sbjct: 97 KISELQSKMAEMEAETKRLNNEISELSVELESLRKFRNSQVTPSVLNRCTEGTKAPESGV 156
Query: 186 GDSVQNRSSTAGIKGRLRKSGSSSVTPLSNYSTTTAQSLGGKNGDNVVVNKQM--PAAQV 243
S ++R N+ + K++ P A V
Sbjct: 157 VKSNKSRR-------------------------------------NMTLKKEICTPDAPV 179
Query: 244 PLHVDSEKG--TRSSKRKAVDVIPILDTPKLFSSKFKVPKLKNS 285
P SEKG T+S KRK VIP +TPKLFSS FKVPKLK+S
Sbjct: 180 PAK-SSEKGTKTKSMKRKEAPVIPTSETPKLFSSGFKVPKLKSS 222
>gi|297844962|ref|XP_002890362.1| hypothetical protein ARALYDRAFT_312926 [Arabidopsis lyrata subsp.
lyrata]
gi|297336204|gb|EFH66621.1| hypothetical protein ARALYDRAFT_312926 [Arabidopsis lyrata subsp.
lyrata]
Length = 656
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 154/313 (49%), Gaps = 79/313 (25%)
Query: 1 MKSEIVAQELIHLLDAAKSDMVVGLKLREASLLKLMLEYTDDQLADFMAWFDLLR----- 55
M EI ++I LL+ +K +++ GLK ++ SL L LE+ D+L+DF AWFD L
Sbjct: 69 MMKEIETTKMIQLLETSKCNLLCGLKEKDHSLCNLKLEHAVDELSDFKAWFDFLTLNTNM 128
Query: 56 ------------------------QKPKDGEPKSIEVSAFLDERAFLWNQYKVMENDLTS 91
+ K K EVS L E F WNQ+K +E+ T
Sbjct: 129 ENESGNSEASAIKSLEAKIRKLKLEYEKLASEKKCEVSDLLRENGFAWNQFKCIESGFTD 188
Query: 92 KINSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISR 151
+ K E+ +AN +I L++ EQLQ SN EKDETI++LK ++A+ME S K + EIS+
Sbjct: 189 TLKRKDDEIAQANTKISSLISYQEQLQSSNQEKDETISRLKAKMAEMEVNSTKKDEEISK 248
Query: 152 LTQELELLRKSRTASDTPVLNRCTRIAGATTSNAGDSVQNRSSTAGIKGRLRKSGSSSVT 211
LT++LE +KSR TPVL RCT++ T SN G++V
Sbjct: 249 LTRDLESAKKSRGL--TPVLTRCTKL--ETRSN-GNTV---------------------- 281
Query: 212 PLSNYSTTTAQSLGGKNGDNVVVNKQMPAAQVPLHVDSEKGTRSSKRKAVDVIP--ILDT 269
G ++ K+ AA +EK ++ SKRK V++ P + +
Sbjct: 282 -----------------GSHISTKKEKVAASTT----NEKVSKRSKRKRVNMTPVSVSEV 320
Query: 270 PKLFSSKFKVPKL 282
PKLF+S F++P L
Sbjct: 321 PKLFTSTFRLPNL 333
>gi|8778999|gb|AAF79914.1|AC022472_23 Contains a weak similarity to Rap8 (Rac-3-1) gene from
Rhynchosciara americana gb|U69899 [Arabidopsis thaliana]
Length = 651
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 154/314 (49%), Gaps = 80/314 (25%)
Query: 1 MKSEIVAQELIHLLDAAKSDMVVGLKLREASLLKLMLEYTDDQLADFMAWFDLLR----- 55
M EI ++ LL+ KS+++ GLK ++ SL L LE++ D+L DF AWFD L
Sbjct: 69 MMKEIETTKMFQLLETYKSNLLCGLKEKDRSLCNLKLEHSLDELKDFKAWFDFLTLNTNV 128
Query: 56 ------------------------QKPKDGEPKSIEVSAFLDERAFLWNQYKVMENDLTS 91
+ K K EVS L E F WNQ+K +E++ T
Sbjct: 129 ESVSGNSEGTAIKSLEAKIRKLKLEYEKLASEKKCEVSDLLRENGFAWNQFKCIESEFTD 188
Query: 92 KINSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISR 151
K+ K E+ +AN +I L++ EQLQ SN EKDETI++LK ++A+MET S K + EIS+
Sbjct: 189 KLKRKDDEIVQANTKISSLISYQEQLQSSNQEKDETISRLKAKMAEMETNSTKKDEEISK 248
Query: 152 LTQELELLRKSRTASDTPVLNRCTRIAGATTSNAGDSVQNRSSTAGIKGRLRKSGSSSVT 211
LT++LE +KSR TPVL RCT++ + RS+
Sbjct: 249 LTRDLESAKKSRGF--TPVLTRCTKL------------EKRSN----------------- 277
Query: 212 PLSNYSTTTAQSLGGKNGDNVVVNKQMPAAQVPLHVDSEKGTRSSKRK-AVDVIP--ILD 268
G G ++ K AA +EK ++SSKRK A ++ P + +
Sbjct: 278 -------------GNTVGSHISTKKDKSAA----STTNEKVSKSSKRKRAKNMTPVSVSE 320
Query: 269 TPKLFSSKFKVPKL 282
PKLF+S F++P L
Sbjct: 321 VPKLFTSTFRLPNL 334
>gi|449470100|ref|XP_004152756.1| PREDICTED: uncharacterized protein LOC101210726 [Cucumis sativus]
gi|449504076|ref|XP_004162247.1| PREDICTED: uncharacterized LOC101210726 [Cucumis sativus]
Length = 340
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 131/251 (52%), Gaps = 54/251 (21%)
Query: 1 MKSEIVAQELIHLLDAAKSDMVVGLKLREASLLKLMLEYTDDQLADFMAWFDLLRQK--- 57
+K E+ +++ H L+A+K D+ + + R + L ++ E+ +D+L DF F LL K
Sbjct: 69 LKGELALRDMEHSLEASKLDLNMSMMQRGSLLRQITSEHANDELQDFKELFSLLYTKITV 128
Query: 58 --------------------------------------PKDGEPKSIEVSAFLDERAFLW 79
K +S EV+A L E+ F+W
Sbjct: 129 TPFQDVTSRTFLNSGKSNQRTQNSKALNIEVERLQKAYEKLESERSSEVTALLAEKTFVW 188
Query: 80 NQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQME 139
NQY +MEND SK+ +R EV+ +IE LLA+ EQLQ N+EKD TIA L++++ +ME
Sbjct: 189 NQYNLMENDYKSKLRHERTEVELGRTKIENLLANMEQLQSLNDEKDCTIAALESKLEKME 248
Query: 140 TGSKKWNTEISRLTQELELLRKSRTASDTPVLNRCTRIAGATTSNAGDSVQNRSSTAGIK 199
S+K N EISR++ E+E+LRK AS T VLNRCT +G NR+ G+K
Sbjct: 249 VNSRKLNDEISRISHEMEVLRKHNCASVTSVLNRCT--SG-----------NRTFGLGVK 295
Query: 200 GRLRKSGSSSV 210
+ + SGS+ +
Sbjct: 296 EKEKGSGSNII 306
>gi|194696218|gb|ACF82193.1| unknown [Zea mays]
gi|414875894|tpg|DAA53025.1| TPA: hypothetical protein ZEAMMB73_655144 [Zea mays]
Length = 398
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 13/122 (10%)
Query: 39 YTDDQLADFMAWFDLLRQKPKDGEPKSIEVSAFLDERAFLWNQYKVMENDLTSKINSKRA 98
YT ++L + +R + K E+SA E+ F+WNQ K ME D T I SK
Sbjct: 158 YTKEELQKLKKAYKTMRSE------KDKEISALQAEKNFVWNQLKNMEKDYTGTIKSKHI 211
Query: 99 EVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
EV +A E +KLL + ++LQ + +KD I KL+ +++ + IS L EL+
Sbjct: 212 EVKQATEAAQKLLQNVDELQAAAQKKDGEIDKLQIEVSNAK-------QRISILEDELQN 264
Query: 159 LR 160
LR
Sbjct: 265 LR 266
>gi|414875892|tpg|DAA53023.1| TPA: hypothetical protein ZEAMMB73_655144 [Zea mays]
Length = 365
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 13/122 (10%)
Query: 39 YTDDQLADFMAWFDLLRQKPKDGEPKSIEVSAFLDERAFLWNQYKVMENDLTSKINSKRA 98
YT ++L + +R + K E+SA E+ F+WNQ K ME D T I SK
Sbjct: 158 YTKEELQKLKKAYKTMRSE------KDKEISALQAEKNFVWNQLKNMEKDYTGTIKSKHI 211
Query: 99 EVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
EV +A E +KLL + ++LQ + +KD I KL+ +++ + IS L EL+
Sbjct: 212 EVKQATEAAQKLLQNVDELQAAAQKKDGEIDKLQIEVSNAK-------QRISILEDELQN 264
Query: 159 LR 160
LR
Sbjct: 265 LR 266
>gi|414875893|tpg|DAA53024.1| TPA: hypothetical protein ZEAMMB73_655144 [Zea mays]
Length = 353
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 63/122 (51%), Gaps = 13/122 (10%)
Query: 39 YTDDQLADFMAWFDLLRQKPKDGEPKSIEVSAFLDERAFLWNQYKVMENDLTSKINSKRA 98
YT ++L + +R + K E+SA E+ F+WNQ K ME D T I SK
Sbjct: 158 YTKEELQKLKKAYKTMRSE------KDKEISALQAEKNFVWNQLKNMEKDYTGTIKSKHI 211
Query: 99 EVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
EV +A E +KLL + ++LQ + +KD I KL Q+E + K IS L EL+
Sbjct: 212 EVKQATEAAQKLLQNVDELQAAAQKKDGEIDKL-----QIEVSNAK--QRISILEDELQN 264
Query: 159 LR 160
LR
Sbjct: 265 LR 266
>gi|226501588|ref|NP_001144010.1| uncharacterized protein LOC100276829 [Zea mays]
gi|195635295|gb|ACG37116.1| hypothetical protein [Zea mays]
Length = 385
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 39 YTDDQLADFMAWFDLLRQKPKDGEPKSIEVSAFLDERAFLWNQYKVMENDLTSKINSKRA 98
YT ++L + +R + K E+SA E+ F+WNQ K ME D T I SK
Sbjct: 158 YTKEELQKLKKAYKTMRSE------KDKEISALQAEKNFVWNQLKNMEKDYTGTIKSKHI 211
Query: 99 EVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
EV + E +KLL + ++LQ + +KD I KL+ +++ + IS L EL+
Sbjct: 212 EVKQTTEAAQKLLQNVDELQAAAQKKDGEIDKLQIEVSNAK-------QRISILEDELQN 264
Query: 159 LR 160
LR
Sbjct: 265 LR 266
>gi|357165769|ref|XP_003580487.1| PREDICTED: uncharacterized protein LOC100846673 [Brachypodium
distachyon]
Length = 364
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 15 DAAKSDMVVGLKLREASLLKLMLE--YTDDQLA--DFMAWFDLLRQKPKD-GEPKSIEVS 69
D AK ++ + +KLRE ++E TD + + D A L++ + K E+
Sbjct: 117 DLAKENLKLKIKLREIESPPELIENTMTDHEHSGRDLRAEIRELKKAYRTLSSKKDKEIK 176
Query: 70 AFLDERAFLWNQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIA 129
A E+ F+WNQ+K ME D S + K+ E RA E +KL + E+LQ++ +K++ I
Sbjct: 177 ALDAEKNFVWNQFKTMEKDYVSLLKKKKMEEARATEGAQKLQQTVEELQMAVQKKEDEID 236
Query: 130 KL----KTQIAQME 139
+L KT+I +E
Sbjct: 237 RLQAEAKTKILTLE 250
>gi|242056103|ref|XP_002457197.1| hypothetical protein SORBIDRAFT_03g003090 [Sorghum bicolor]
gi|241929172|gb|EES02317.1| hypothetical protein SORBIDRAFT_03g003090 [Sorghum bicolor]
Length = 401
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Query: 59 KDGEPKSIEVSAFLDERAFLWNQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQ 118
KD E K ++ E F+WNQ K ME + + I SK EV +A E +KLL + +LQ
Sbjct: 188 KDKETKELQA-----ENKFVWNQLKTMEGEYSRTIKSKNIEVKQATEAAQKLLQNVNELQ 242
Query: 119 LSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELELLR 160
++ +KD+ I +L+ ++ T +K+ +S L EL+ LR
Sbjct: 243 VAAQKKDDEIVRLEEEV----TNAKE---RMSILEDELQKLR 277
>gi|242052777|ref|XP_002455534.1| hypothetical protein SORBIDRAFT_03g012780 [Sorghum bicolor]
gi|241927509|gb|EES00654.1| hypothetical protein SORBIDRAFT_03g012780 [Sorghum bicolor]
Length = 479
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 64 KSIEVSAFLDERAFLWNQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNE 123
K E+SA ++ F+ NQ K ME D I SK EV +A +KLL + + LQ+++ +
Sbjct: 184 KDKEISALQAKKNFVCNQLKTMEEDYRGAIKSKNIEVKQA----QKLLQNVDGLQVASQK 239
Query: 124 KDETIAKLKTQI 135
KD+ I +L+ ++
Sbjct: 240 KDDEIIRLQVEV 251
>gi|124511958|ref|XP_001349112.1| conserved Plasmodium membrane protein, unknown function [Plasmodium
falciparum 3D7]
gi|74815211|sp|Q8IBP1.1|YPF16_PLAF7 RecName: Full=Uncharacterized protein PF07_0086
gi|23498880|emb|CAD50958.1| conserved Plasmodium membrane protein, unknown function [Plasmodium
falciparum 3D7]
Length = 3429
Score = 43.9 bits (102), Expect = 0.077, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 41/78 (52%)
Query: 80 NQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQME 139
N+ K EN++ ++N EV++ NE + K+ ++ N+ DE + K+ ++ +M
Sbjct: 772 NEKKKGENEMNKEVNKMNEEVNKMNEEVNKMNEEVNKMNKEVNKMDEEVNKMNKEVNKMN 831
Query: 140 TGSKKWNTEISRLTQELE 157
S + N E + + ++ E
Sbjct: 832 KESNEMNKEANEMNKDEE 849
>gi|326501732|dbj|BAK02655.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 64 KSIEVSAFLDERAFLWNQYKVMEND---LTSKINSKRAEVDRANERIEKLLASTEQLQLS 120
K EVSA L E+ F+WNQ+K+ME D L K++ + A+ A E++++ L QLQ+
Sbjct: 161 KETEVSALLAEKDFVWNQFKMMEKDYKALVKKMDKEAAQATEAAEKLQQKLEEL-QLQVV 219
Query: 121 NNEKDETIAKLKTQ 134
+KD+ I +L+ +
Sbjct: 220 AQKKDDDIGRLQAE 233
>gi|397615541|gb|EJK63496.1| hypothetical protein THAOC_15839 [Thalassiosira oceanica]
Length = 935
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 13/100 (13%)
Query: 64 KSIEVSAFL--DERAFLWNQYKVMENDLTSKINSKRAEVDRANERIEK--LLASTEQLQL 119
+ IE SA +E A L + + E +L S+I+ K++E+DR RIEK L S EQ
Sbjct: 469 RQIERSAVEKDEEIARLEDSIRDRERELKSQIDQKQSELDRQRARIEKYDLGCSKEQ--- 525
Query: 120 SNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELELL 159
ET+A L+ I +E N EISRLT E ++L
Sbjct: 526 ------ETVALLEQAIEDLEKAHNDNNDEISRLTSENQVL 559
>gi|260588639|ref|ZP_05854552.1| putative cell division protein Smc [Blautia hansenii DSM 20583]
gi|331082010|ref|ZP_08331138.1| chromosome segregation protein SMC [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541114|gb|EEX21683.1| putative cell division protein Smc [Blautia hansenii DSM 20583]
gi|330405605|gb|EGG85135.1| chromosome segregation protein SMC [Lachnospiraceae bacterium
6_1_63FAA]
Length = 1186
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 107 IEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELELLRKS--RT 164
+ +L AS EQ + E +ETI KL Q + E KK+ EISR TQ+LE + + R
Sbjct: 430 VAQLDASEEQYKTQKQEIEETIEKLIRQGNRCEDQIKKYQAEISRATQQLENEKTAYHRE 489
Query: 165 ASDTPVLNRCTRIAGATTSNAGDSVQNRSSTAGIKGRLRKSGSSSVTPLSNYSTTTAQSL 224
AS L T ++ ++ + + +GIKG + + + NY T +L
Sbjct: 490 ASRLESLKNITERYDGYGNSIRRVMEQKKNVSGIKGVV----ADLLKVEKNYETAIETAL 545
Query: 225 GG 226
GG
Sbjct: 546 GG 547
>gi|116317879|emb|CAH65908.1| H0207B04.9 [Oryza sativa Indica Group]
Length = 414
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 103/238 (43%), Gaps = 23/238 (9%)
Query: 64 KSIEVSAFLDERAFLWNQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNE 123
K EVSA E+ F+WNQ + MEND T + K+ E +A E +KL + E+LQ N
Sbjct: 185 KEKEVSALRAEKDFVWNQLRTMENDYTDLLKKKKIEAAQATEAAQKLQKNLEELQDQN-- 242
Query: 124 KDETIAKL-------KTQIAQMETGSKKWNTEISRLTQELELLRKSRTAS------DTPV 170
K I +L K I+ +E ++ + + E+E L+ + + D
Sbjct: 243 KGNEIGRLQAEAVDAKMNISILEDKLQEMLSLVKEKDLEIEQLKHGQPMTSQINKKDINQ 302
Query: 171 LNRCTRIAGATTSNAGDSVQNRSSTAGIKGRLRKSGSSSVTPLSNYSTTTAQSLGGKNGD 230
NR R + + ++Q +K + + SS + + + + Q L G +
Sbjct: 303 KNRKCRSQDPPSRDKSTNLQATPPGRKVKISRQHASSSKQKQVQSRNNSRRQKLEGDKSE 362
Query: 231 NVVVNKQ-MPAAQVPLHVDSEKGTRSSKRKAVDVIPILDTPKLFSSKFKVPKLKNSFP 287
K+ +P++ + + +SS P++ P LFS F+VPK+K P
Sbjct: 363 VGEKRKRALPSSSGLQRCSARQQAKSS------ASPVV-QPLLFSPIFRVPKVKTPTP 413
>gi|218194238|gb|EEC76665.1| hypothetical protein OsI_14633 [Oryza sativa Indica Group]
Length = 414
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 103/238 (43%), Gaps = 23/238 (9%)
Query: 64 KSIEVSAFLDERAFLWNQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNE 123
K EVSA E+ F+WNQ + MEND T + K+ E +A E +KL + E+LQ N
Sbjct: 185 KEKEVSALRAEKDFVWNQLRTMENDYTDLLKKKKIEAAQATEAAQKLQKNLEELQDQN-- 242
Query: 124 KDETIAKL-------KTQIAQMETGSKKWNTEISRLTQELELLRKSRTAS------DTPV 170
K I +L K I+ +E ++ + + E+E L+ + + D
Sbjct: 243 KGNEIGRLQAEAVDAKMNISILEDKLQEMLSLVKEKDLEIEQLKHGQPMTSQINKKDINQ 302
Query: 171 LNRCTRIAGATTSNAGDSVQNRSSTAGIKGRLRKSGSSSVTPLSNYSTTTAQSLGGKNGD 230
NR R + + ++Q +K + + SS + + + + Q L G +
Sbjct: 303 KNRKCRSQDPPSRDKSTNLQATPPGRKVKISRQHASSSKQKQVQSRNNSRRQKLEGDKSE 362
Query: 231 NVVVNKQ-MPAAQVPLHVDSEKGTRSSKRKAVDVIPILDTPKLFSSKFKVPKLKNSFP 287
K+ +P++ + + +SS P++ P LFS F+VPK+K P
Sbjct: 363 VGEKRKRALPSSSGLQRCSARQQAKSS------ASPVV-QPLLFSPIFRVPKVKTPTP 413
>gi|357138477|ref|XP_003570818.1| PREDICTED: uncharacterized protein LOC100839098 [Brachypodium
distachyon]
Length = 498
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 64 KSIEVSAFLDERAFLWNQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNE 123
K EVSA L ER F+ +Q +ME D + + K+ E +A E +KL + +LQ+ +
Sbjct: 96 KDKEVSALLSERDFVCDQMSIMEQDFAALL--KKLEAAQATESAQKLQQNINELQVLAEK 153
Query: 124 KDETIAKLKTQ 134
KD+ I++L+ +
Sbjct: 154 KDDEISRLRAK 164
>gi|115456902|ref|NP_001052051.1| Os04g0117200 [Oryza sativa Japonica Group]
gi|38344113|emb|CAE01720.2| OSJNBb0050O03.10 [Oryza sativa Japonica Group]
gi|113563622|dbj|BAF13965.1| Os04g0117200 [Oryza sativa Japonica Group]
Length = 414
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 23/238 (9%)
Query: 64 KSIEVSAFLDERAFLWNQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNE 123
K EVSA E F+WNQ + MEND T + K+ E +A E +KL + E+LQ N
Sbjct: 185 KEKEVSALRAENDFVWNQLRTMENDYTDLLKKKKIEAAQATEAAQKLQKNLEELQDQN-- 242
Query: 124 KDETIAKL-------KTQIAQMETGSKKWNTEISRLTQELELLRKSRTAS------DTPV 170
K I +L K I+ +E ++ + + E+E L+ + + D
Sbjct: 243 KGNEIGRLQAEAVDAKMNISILEDKLQEMLSLVKEKDLEIEQLKHGQPMTSQINKKDINQ 302
Query: 171 LNRCTRIAGATTSNAGDSVQNRSSTAGIKGRLRKSGSSSVTPLSNYSTTTAQSLGGKNGD 230
NR R + + ++Q +K + + SS + + + + Q L G +
Sbjct: 303 KNRKCRSQDPPSRDKSTNLQATPPGRKVKISRQHASSSKQKQVQSRNNSRRQKLEGDKSE 362
Query: 231 NVVVNKQ-MPAAQVPLHVDSEKGTRSSKRKAVDVIPILDTPKLFSSKFKVPKLKNSFP 287
K+ +P++ + + +SS P++ P LFS F+VPK+K P
Sbjct: 363 VGEKRKRALPSSSGLQRCSARQQAKSS------ASPVV-QPLLFSPIFRVPKVKTPTP 413
>gi|372325122|ref|ZP_09519711.1| GntR family transcriptional regulator [Oenococcus kitaharae DSM
17330]
gi|366983930|gb|EHN59329.1| GntR family transcriptional regulator [Oenococcus kitaharae DSM
17330]
Length = 240
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 15/98 (15%)
Query: 29 EASLLKLMLEYTDD------QLADFMAWFDLLRQKPKDGEPKSIEVSAF-------LDER 75
E+ ++K + Y +D +L D +D++RQ+ D EP ++E S LD++
Sbjct: 97 ESQVIKFEIRYPNDSEQIALRLNDKELIYDIIRQRVVDKEPYALEYSKMPVKVIPGLDDK 156
Query: 76 AFLWNQYKVMENDLTSKINS--KRAEVDRANERIEKLL 111
+ Y ++NDL KI S ++ D+AN EK L
Sbjct: 157 VLHASIYGYIQNDLKLKIGSAFRKISADKANSNDEKYL 194
>gi|409200787|ref|ZP_11228990.1| Sensory transduction histidine kinase [Pseudoalteromonas
flavipulchra JG1]
Length = 654
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 6/137 (4%)
Query: 81 QYKVMENDLTSKINSKRAEVDRANERIEKLLAST--EQLQLSNNEKDETIAKLKTQIAQM 138
QY ++EN + ++D N I +L+ T E+L N +D TI KL Q+
Sbjct: 453 QYNIVEN-VQESYGKLMDKIDELNHFINQLMLVTDNEKLATMLNLRDFTICKLVNQVHTQ 511
Query: 139 ETGSKKWNTEISRLTQELELLRKSRTASDTPVLNRCT-RIAGATTSNAGDSVQNRSSTAG 197
G K N E +L ++ + D + C I G + GD VQ + S
Sbjct: 512 AAGLFKDNKE--QLEVNYQISGTEKITIDLDAITNCVLEILGNAIKHGGDKVQVKMSFFS 569
Query: 198 IKGRLRKSGSSSVTPLS 214
+ L S TPLS
Sbjct: 570 VDSNLIIRIEDSGTPLS 586
>gi|195127057|ref|XP_002007985.1| GI13252 [Drosophila mojavensis]
gi|193919594|gb|EDW18461.1| GI13252 [Drosophila mojavensis]
Length = 1641
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 97 RAEVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQ----METGSK---KWNTEI 149
RAE D N R+ QL+ ++ E D + K ++ Q M+ K K N+E+
Sbjct: 1491 RAEADELNHRVTLTQRDISQLEENSTEDDNLVDDAKRKVGQAKADMQDAKKQIEKANSEL 1550
Query: 150 SRLTQELELLRKSRTASDTPVLNRCTRIAG 179
S + ELE L+ T+ + NR T + G
Sbjct: 1551 SAIKDELENLKDINTSDLDKLENRLTEVEG 1580
>gi|222630581|gb|EEE62713.1| hypothetical protein OsJ_17516 [Oryza sativa Japonica Group]
Length = 453
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 64 KSIEVSAFLDERAFLWNQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNE 123
K EVSA E F+WNQ + MEND T + K+ E +A E +KL + E+LQ N
Sbjct: 185 KEKEVSALRAENDFVWNQLRTMENDYTDLLKKKKIEAAQATEAAQKLQKNLEELQDQN-- 242
Query: 124 KDETIAKLKTQ 134
K I +L+ +
Sbjct: 243 KGNEIGRLQAE 253
>gi|328722043|ref|XP_001943480.2| PREDICTED: serine/threonine-protein kinase MRCK alpha-like
[Acyrthosiphon pisum]
Length = 1794
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 80 NQYKVMENDLTSKINSKRAEVDRANERIEKLLASTE-QLQLSNNEKDETIAKLKTQIAQM 138
N K M +D SK+N E D E++ LA E +L +EKD I KL TQIAQ+
Sbjct: 664 NMCKKMASDFESKLNCITREKDNEIEKLHTQLAQLESKLNCITHEKDNEIEKLHTQIAQL 723
Query: 139 ETGSKKWNTE 148
+ + N+E
Sbjct: 724 QQQNCCLNSE 733
>gi|197120792|ref|YP_002132743.1| signal transduction histidine kinase with CheB and CheR activity
[Anaeromyxobacter sp. K]
gi|196170641|gb|ACG71614.1| signal transduction histidine kinase with CheB and CheR activity
[Anaeromyxobacter sp. K]
Length = 1233
Score = 38.9 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 QYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMET 140
QY+ ++ +L S + VD E L AS EQLQ N E + +L+T ++++
Sbjct: 654 QYRRLQAELASSRERLQFTVDELENANEALRASNEQLQSMNEELHSSNEELQTSQEELQS 713
Query: 141 GSKKWNT---EISRLTQELELLRK------SRTASDTPVLNRCTRIAGAT 181
+++ NT E+S+ ELE+L T T L+R RIA T
Sbjct: 714 VNEELNTVNAELSKKIDELEVLNGDLHNLLQSTQIATVFLDRQFRIARFT 763
>gi|74967379|sp|Q27802.2|DYHC2_TRIGR RecName: Full=Cytoplasmic dynein 2 heavy chain 1; AltName:
Full=Dynein heavy chain isotype 1B
gi|17019507|gb|AAA63583.2| dynein heavy chain isotype 1B [Tripneustes gratilla]
Length = 4318
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 100 VDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELELL 159
VD R +KL +L+ ++ ETIA + I ++E ++WN ++S L ELE L
Sbjct: 3148 VDEYKRRFQKLNEEAAKLKYELEKEQETIASAENLIGKLEGEYQRWNNQVSELNTELETL 3207
Query: 160 RK 161
K
Sbjct: 3208 PK 3209
>gi|448468122|ref|ZP_21599753.1| bacterio-opsin activator [Halorubrum kocurii JCM 14978]
gi|445810865|gb|EMA60879.1| bacterio-opsin activator [Halorubrum kocurii JCM 14978]
Length = 668
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 28/174 (16%)
Query: 54 LRQKPKDGEP--KSIEVSAFLDERAFLWNQYKVMENDLTSKIN-------------SKRA 98
+R KDG P + V+ D+ + Y +ND+T + N S+R
Sbjct: 218 IRNYRKDGTPFWNELTVAPVYDDDGEI-AHYVGFQNDVTDRKNAERLAEERAEKLASERQ 276
Query: 99 EVDRANERIEKLLASTEQLQLSNNEKDETIA-KLKTQIAQMETGSKKWNTEISRLTQELE 157
+DR R+ LL+ ++ L E E+IA ++ +IA + + W E+S T +L+
Sbjct: 277 ALDRVLGRVNGLLSDITRI-LVEGEDAESIAERVCEEIAAEQGYTGGWIAEVSSATGQLD 335
Query: 158 LLRKSRTA---------SDTPVLNRCTRIAG-ATTSNAGDSVQNRSSTAGIKGR 201
+ S A + P RC A AT AG R + + GR
Sbjct: 336 ITAASGVAVEPGTSIPLDEVPSAVRCAADANEATECAAGTGGDGRLAPGAVGGR 389
>gi|292654853|ref|YP_003534750.1| chromosome segregation protein SMC [Haloferax volcanii DS2]
gi|448292928|ref|ZP_21483249.1| chromosome segregation protein SMC [Haloferax volcanii DS2]
gi|291370379|gb|ADE02606.1| chromosome segregation protein SMC [Haloferax volcanii DS2]
gi|445571903|gb|ELY26446.1| chromosome segregation protein SMC [Haloferax volcanii DS2]
Length = 1240
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 26/175 (14%)
Query: 90 TSKINSKRAEVDRANERIEKLLASTEQL--QLSNNEKDETIAKLKTQIAQMETGSKKWNT 147
+++I+ R E++RA ERI +L A+ L +L EK+E AK+ I ++ N
Sbjct: 443 SNQISETRDELERARERIPELKATVSDLHSELDTAEKNE--AKIDGVIEDLQAEKADLND 500
Query: 148 EISRLTQEL-----ELLR-KSRTASDTPVLNRCTRIAGATTSNAGDSVQNRSSTAGIKGR 201
E+S +T EL E R ++R D N R A T NAG +G+ G
Sbjct: 501 ELSEVTDELQTKQSEYARLEARAGKDGD--NSWPR-AVTTILNAG--------ISGVHGA 549
Query: 202 LRKSGSSSVTPLSNYSTTTAQSLGGKNGDNVVVNKQMPAAQVPLHVDSEKGTRSS 256
+ + GS Y+ + GG+ NVVV+ + H+ S K R++
Sbjct: 550 VGQLGSVD----GEYAKACETAAGGRLA-NVVVDDDGVGSSCIGHLKSRKAGRAT 599
>gi|399520048|ref|ZP_10760831.1| methyltransferase FkbM [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399111991|emb|CCH37390.1| methyltransferase FkbM [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 368
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 71 FLDERAFLWNQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAK 130
+L E+A L ++ +L S++N + ANER+ +L A E+ + I
Sbjct: 235 YLSEKALLIYRFSHEAAELRSRLNDSNVKYREANERLAELKARYEEANYKYQDATTNITN 294
Query: 131 LKTQIAQMETGSKKWNTEISRL--TQELELLRKSRTA 165
LKTQ++++E K+ + E R+ ++++ L R S +A
Sbjct: 295 LKTQMSRLELSLKEVSFERDRVVSSKDIALERASLSA 331
>gi|47230389|emb|CAF99582.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1905
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 27/190 (14%)
Query: 9 ELIHLLDAAKSDMVVGLKLREASLLKLMLEYTDDQLADFMAWFDLLRQKPKDGEPKSIEV 68
E+ LD AK + G + M+ T L DF W D++ K +E+
Sbjct: 1281 EMHDELDTAKKSVADGERT-------AMMAVTPSPLFDFSVWADMMHLK--------LEL 1325
Query: 69 SAFLDERAFLWNQYKVMENDLTS-------KINSKRAEVDRANERIEKLLASTEQLQLSN 121
L + + K E +LT+ ++ + EVD+ E+ EK + +LQLS
Sbjct: 1326 QEILLAKEEQEDVLKRRERELTALKGALKEEVAAHDQEVDKLKEQYEKEIG---RLQLSL 1382
Query: 122 NEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELELLRKSRTASDTPV--LNRCTRIAG 179
E ++ A + + A++E + RLT E E LR+ + V LNR A
Sbjct: 1383 EEAKQSSAAVVREKAEVEAAKGAVEGQAGRLTLETERLRRRAQELENEVAKLNRIIDEAK 1442
Query: 180 ATTSNAGDSV 189
S GD V
Sbjct: 1443 LQESRLGDRV 1452
>gi|213649069|ref|ZP_03379122.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
Length = 218
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 100 VDRANERIEKLLAS-TEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
+D A + + L S T+Q +N DET+A+ K Q Q++T K N S LTQ+
Sbjct: 155 IDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTA 214
Query: 159 LRKS 162
+ KS
Sbjct: 215 MNKS 218
>gi|417529704|ref|ZP_12185332.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|353667124|gb|EHD04727.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
Length = 271
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 100 VDRANERIEKLLAS-TEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
+D A + + L S T+Q +N DET+A+ K Q Q++T K N S LTQ+
Sbjct: 208 IDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTA 267
Query: 159 LRKS 162
+ KS
Sbjct: 268 MNKS 271
>gi|256081884|ref|XP_002577197.1| cyln2 (cytoplasmic linker protein-115) (clip-115) [Schistosoma
mansoni]
gi|353232085|emb|CCD79440.1| putative cyln2 (cytoplasmic linker protein-115) (clip-115)
[Schistosoma mansoni]
Length = 1086
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Query: 42 DQLADFMAWFDLLRQKPKDGEPKSIEVSAFLDERAFLWNQYKVMENDLTSKINSKRAEVD 101
DQL + L Q ++ + K E+ +LD+ N+ ++ + +L +++NS + D
Sbjct: 689 DQLVNIQRQTITLNQDKENSDNKLNEIENYLDKLKIQLNESRIKQEELLTELNSAHLKRD 748
Query: 102 RANERIEKLLASTEQLQLSNNEKD------ETIAKLKTQIAQMETGSKKWNTEISRLTQE 155
+ E I K+L L ++ NE+D + I LK QIA G +K ++ + Q
Sbjct: 749 QLVEDISKVLGD---LSITENEEDLSPILCKRINDLKEQIA----GHEKVRQDLEKYCQT 801
Query: 156 LE 157
LE
Sbjct: 802 LE 803
>gi|213613357|ref|ZP_03371183.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 64
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 100 VDRANERIEKLLAS-TEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
+D A + + L S T+Q +N DET+A+ K Q Q++T K N S LTQ+
Sbjct: 1 MDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTA 60
Query: 159 LRKS 162
+ KS
Sbjct: 61 MNKS 64
>gi|213580925|ref|ZP_03362751.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 323
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 100 VDRANERIEKLLAS-TEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
+D A + + L S T+Q +N DET+A+ K Q Q++T K N S LTQ+
Sbjct: 260 IDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTA 319
Query: 159 LRKS 162
+ KS
Sbjct: 320 MNKS 323
>gi|392544328|ref|ZP_10291465.1| Sensory transduction histidine kinase [Pseudoalteromonas piscicida
JCM 20779]
Length = 654
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 6/137 (4%)
Query: 81 QYKVMENDLTSKINSKRAEVDRANERIEKLLAST--EQLQLSNNEKDETIAKLKTQIAQM 138
QY ++EN + ++D N+ I +L+ T E+L N +D TI KL +
Sbjct: 453 QYNIVEN-VQESYGKLMDKIDELNQFINQLMLVTDNEKLATMLNLRDFTICKLVNTVHTQ 511
Query: 139 ETGSKKWNTEISRLTQELELLRKSRTASDTPVLNRCT-RIAGATTSNAGDSVQNRSSTAG 197
G K N E +L ++ + D + C I G + GD VQ + S
Sbjct: 512 AAGLFKDNKE--QLEVNYQISGTEKITVDLDAMTNCVLEILGNAIKHGGDKVQVKMSFFS 569
Query: 198 IKGRLRKSGSSSVTPLS 214
+ L S TPLS
Sbjct: 570 VDSNLIIRIEDSGTPLS 586
>gi|16765298|ref|NP_460913.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167552810|ref|ZP_02346561.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|167993533|ref|ZP_02574627.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168823002|ref|ZP_02835002.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|200390035|ref|ZP_03216646.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|374980984|ref|ZP_09722314.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|375000905|ref|ZP_09725245.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|378445347|ref|YP_005232979.1| flagellar hook associated protein (FliD) [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|378450570|ref|YP_005237929.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378699826|ref|YP_005181783.1| flagellar hook associated protein (FliD) [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|378984522|ref|YP_005247677.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|378989302|ref|YP_005252466.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379701140|ref|YP_005242868.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|409249593|ref|YP_006885415.1| Flagellar hook-associated protein 2 HAP2; Filament cap protein;
Flagellar cap protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|417341068|ref|ZP_12122237.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|417357411|ref|ZP_12132550.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|417367550|ref|ZP_12139400.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|417382759|ref|ZP_12148632.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
gi|417472701|ref|ZP_12168323.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|418513262|ref|ZP_13079493.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|422026163|ref|ZP_16372566.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422031190|ref|ZP_16377365.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|427550416|ref|ZP_18927869.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427566655|ref|ZP_18932585.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427586841|ref|ZP_18937375.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427610234|ref|ZP_18942241.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427633945|ref|ZP_18947134.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427656199|ref|ZP_18951899.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427661346|ref|ZP_18956811.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427669250|ref|ZP_18961613.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|427768091|ref|ZP_18966791.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|120320|sp|P16328.2|FLID_SALTY RecName: Full=Flagellar hook-associated protein 2; Short=HAP2;
AltName: Full=Filament cap protein; AltName:
Full=Flagellar cap protein
gi|47687|emb|CAA36030.1| unnamed protein product [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|16420495|gb|AAL20872.1| filament capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|199602480|gb|EDZ01026.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205322641|gb|EDZ10480.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205328390|gb|EDZ15154.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205340685|gb|EDZ27449.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|261247126|emb|CBG24949.1| flagellar hook associated protein (FliD) [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|267993948|gb|ACY88833.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158474|emb|CBW17984.1| flagellar hook associated protein (FliD) [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312912950|dbj|BAJ36924.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320085421|emb|CBY95202.1| Flagellar hook-associated protein 2 HAP2; Filament cap protein;
Flagellar cap protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321224604|gb|EFX49667.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323130239|gb|ADX17669.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|332988849|gb|AEF07832.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|353075593|gb|EHB41353.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353588985|gb|EHC47884.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|353594112|gb|EHC51711.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|353613945|gb|EHC65920.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
gi|353653312|gb|EHC94892.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|357958348|gb|EHJ83002.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|366082159|gb|EHN46096.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|414018140|gb|EKT01811.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414018979|gb|EKT02607.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414020830|gb|EKT04402.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414032552|gb|EKT15549.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414034227|gb|EKT17160.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414037367|gb|EKT20142.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414047376|gb|EKT29661.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414048900|gb|EKT31133.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414053350|gb|EKT35355.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414059595|gb|EKT41162.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|414065151|gb|EKT45939.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
Length = 467
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 100 VDRANERIEKLLAS-TEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
+D A + + L S T+Q +N DET+A+ K Q Q++T K N S LTQ+
Sbjct: 404 IDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTA 463
Query: 159 LRKS 162
+ KS
Sbjct: 464 MNKS 467
>gi|56413127|ref|YP_150202.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161613473|ref|YP_001587438.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168234132|ref|ZP_02659190.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168244809|ref|ZP_02669741.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168259754|ref|ZP_02681727.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168462500|ref|ZP_02696431.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|194442510|ref|YP_002041224.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194448077|ref|YP_002046010.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194469593|ref|ZP_03075577.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|197264994|ref|ZP_03165068.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197362053|ref|YP_002141690.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|386591788|ref|YP_006088188.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|417348349|ref|ZP_12127320.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|417517696|ref|ZP_12180228.1| Flagellar hook-associated protein fliD [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|417538590|ref|ZP_12191137.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
gi|418760738|ref|ZP_13316891.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418764865|ref|ZP_13320958.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418772381|ref|ZP_13328385.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418775571|ref|ZP_13331529.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418778165|ref|ZP_13334078.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418783176|ref|ZP_13339024.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418789498|ref|ZP_13345285.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418794773|ref|ZP_13350491.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418796896|ref|ZP_13352587.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418800739|ref|ZP_13356387.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|418809507|ref|ZP_13365059.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418813660|ref|ZP_13369181.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418814927|ref|ZP_13370435.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418822714|ref|ZP_13378125.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418826376|ref|ZP_13381610.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|418833621|ref|ZP_13388540.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418836619|ref|ZP_13391503.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418840608|ref|ZP_13395437.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418844943|ref|ZP_13399729.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418850640|ref|ZP_13405356.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418853852|ref|ZP_13408537.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|418858996|ref|ZP_13413605.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418863534|ref|ZP_13418072.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418868194|ref|ZP_13422637.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|419730384|ref|ZP_14257330.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419735329|ref|ZP_14262209.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419740805|ref|ZP_14267524.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419742367|ref|ZP_14269041.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419747276|ref|ZP_14273807.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|419789425|ref|ZP_14315105.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419794328|ref|ZP_14319942.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|421568979|ref|ZP_16014687.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421574650|ref|ZP_16020271.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421579741|ref|ZP_16025303.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421584862|ref|ZP_16030368.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|56127384|gb|AAV76890.1| flagellar hook associated protein 2 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|161362837|gb|ABX66605.1| hypothetical protein SPAB_01190 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401173|gb|ACF61395.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194406381|gb|ACF66600.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194455957|gb|EDX44796.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|195634321|gb|EDX52673.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197093530|emb|CAR58991.1| flagellar hook associated protein 2 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197243249|gb|EDY25869.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|205331895|gb|EDZ18659.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205336384|gb|EDZ23148.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205350809|gb|EDZ37440.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|353575879|gb|EHC38503.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|353651078|gb|EHC93265.1| Flagellar hook-associated protein fliD [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|353666215|gb|EHD04100.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
gi|381293539|gb|EIC34689.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381294392|gb|EIC35531.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381295093|gb|EIC36214.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381314238|gb|EIC55012.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|381319548|gb|EIC60244.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|383798832|gb|AFH45914.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|392615071|gb|EIW97511.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392615210|gb|EIW97649.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392732495|gb|EIZ89706.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392741814|gb|EIZ98909.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392742290|gb|EIZ99380.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392748644|gb|EJA05630.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392755979|gb|EJA12878.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392757596|gb|EJA14482.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392760739|gb|EJA17574.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392760987|gb|EJA17818.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392770269|gb|EJA26997.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392773592|gb|EJA30288.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392774886|gb|EJA31581.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392783306|gb|EJA39931.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|392786971|gb|EJA43519.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392793306|gb|EJA49750.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392795041|gb|EJA51424.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392800980|gb|EJA57210.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392807322|gb|EJA63398.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392811098|gb|EJA67110.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392813752|gb|EJA69716.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392818490|gb|EJA74374.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392825992|gb|EJA81726.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392831235|gb|EJA86869.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392833402|gb|EJA89017.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392838100|gb|EJA93664.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|402521216|gb|EJW28554.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402524850|gb|EJW32147.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402528671|gb|EJW35922.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402530622|gb|EJW37837.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
Length = 467
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 100 VDRANERIEKLLAS-TEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
+D A + + L S T+Q +N DET+A+ K Q Q++T K N S LTQ+
Sbjct: 404 IDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTA 463
Query: 159 LRKS 162
+ KS
Sbjct: 464 MNKS 467
>gi|384499895|gb|EIE90386.1| hypothetical protein RO3G_15097 [Rhizopus delemar RA 99-880]
Length = 1136
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 50/115 (43%), Gaps = 31/115 (26%)
Query: 72 LDERAFLWNQYKVMENDLTSKINSKRAEVDRANERI-------EKLLASTEQ-LQLSNNE 123
LDE A LW QY+ L S+ A +ANE I E L A+T Q L + E
Sbjct: 215 LDEAASLWFQYET----LKSQYAQMNARFQKANEDIAFYKRQLETLDATTRQKLTAAKEE 270
Query: 124 KDETIAK-------------------LKTQIAQMETGSKKWNTEISRLTQELELL 159
KDET A+ LKTQ AQM K + +I ++LELL
Sbjct: 271 KDETPAENSKKVDLDEAASLWFQYETLKTQYAQMNARFNKASEDIEFYKRQLELL 325
>gi|168239198|ref|ZP_02664256.1| flagellar hook-associated protein 2 (HAP2) [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|194738249|ref|YP_002114993.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|194713751|gb|ACF92972.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197288087|gb|EDY27474.1| flagellar hook-associated protein 2 (HAP2) [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
Length = 467
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 100 VDRANERIEKLLAS-TEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
+D A + + L S T+Q +N DET+A+ K Q Q++T K N S LTQ+
Sbjct: 404 IDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTA 463
Query: 159 LRKS 162
+ KS
Sbjct: 464 MNKS 467
>gi|62180534|ref|YP_216951.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|375114864|ref|ZP_09760034.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|62128167|gb|AAX65870.1| flagellar biosynthesis; filament capping protein; enables filament
assembly [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322715010|gb|EFZ06581.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
Length = 467
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 100 VDRANERIEKLLAS-TEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
+D A + + L S T+Q +N DET+A+ K Q Q++T K N S LTQ+
Sbjct: 404 IDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTA 463
Query: 159 LRKS 162
+ KS
Sbjct: 464 MNKS 467
>gi|16760904|ref|NP_456521.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29141404|ref|NP_804746.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213053505|ref|ZP_03346383.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|289827222|ref|ZP_06545938.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|378959076|ref|YP_005216562.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|25513371|pir||AI0750 flagellar hook associated protein 2 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16503201|emb|CAD05708.1| flagellar hook associated protein 2 [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29137031|gb|AAO68595.1| flagellar hook associated protein 2 [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|374352948|gb|AEZ44709.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
Length = 467
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 100 VDRANERIEKLLAS-TEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
+D A + + L S T+Q +N DET+A+ K Q Q++T K N S LTQ+
Sbjct: 404 IDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTA 463
Query: 159 LRKS 162
+ KS
Sbjct: 464 MNKS 467
>gi|406867886|gb|EKD20923.1| hypothetical protein MBM_00036 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 916
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 176 RIAGATTSNAGDSVQNRSSTAGIKGRLRKSGSSSVTP-LSNYSTTTAQSLGGKNGDNVVV 234
R A AT+S A R A I + S + V P LS + TTA+SL + +
Sbjct: 564 RAATATSSLA------REVAANIPADIAYSNHTRVPPNLSRGNPTTARSLAPTSQGSTAT 617
Query: 235 NKQMPAAQVPLHVDSEKGTRSSKRKAVDVI-PILDTPKLFSSKFKVP 280
++ P +P+ V S+ T +SK+ +V+ + PIL K+ S K K P
Sbjct: 618 SRPTPQGSLPVAVPSKPSTNTSKKTSVEPVRPIL---KVLSRKSKEP 661
>gi|204930963|ref|ZP_03221789.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|452119846|ref|YP_007470094.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|204320007|gb|EDZ05212.1| flagellar hook-associated protein 2 [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|451908850|gb|AGF80656.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
Length = 467
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 100 VDRANERIEKLLAS-TEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
+D A + + L S T+Q +N DET+A+ K Q Q++T K N S LTQ+
Sbjct: 404 IDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTA 463
Query: 159 LRKS 162
+ KS
Sbjct: 464 MNKS 467
>gi|417414765|ref|ZP_12158593.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Mississippi str. A4-633]
gi|353624629|gb|EHC73617.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Mississippi str. A4-633]
Length = 467
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 100 VDRANERIEKLLAS-TEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
+D A + + L S T+Q +N DET+A+ K Q Q++T K N S LTQ+
Sbjct: 404 IDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTA 463
Query: 159 LRKS 162
+ KS
Sbjct: 464 MNKS 467
>gi|417372661|ref|ZP_12142898.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|353604652|gb|EHC59373.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
Length = 482
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 100 VDRANERIEKLLAS-TEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
+D A + + L S T+Q +N DET+A+ K Q Q++T K N S LTQ+
Sbjct: 419 IDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTA 478
Query: 159 LRKS 162
+ KS
Sbjct: 479 MNKS 482
>gi|224583540|ref|YP_002637338.1| flagellar capping protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|383496634|ref|YP_005397323.1| flagellar hook associated protein (FliD) [Salmonella enterica
subsp. enterica serovar Typhimurium str. 798]
gi|224468067|gb|ACN45897.1| filament capping protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|380463455|gb|AFD58858.1| flagellar hook associated protein (FliD) [Salmonella enterica
subsp. enterica serovar Typhimurium str. 798]
Length = 418
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 100 VDRANERIEKLLAS-TEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
+D A + + L S T+Q +N DET+A+ K Q Q++T K N S LTQ+
Sbjct: 355 IDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTA 414
Query: 159 LRKS 162
+ KS
Sbjct: 415 MNKS 418
>gi|417390172|ref|ZP_12153742.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
gi|353619559|gb|EHC69908.1| Flagellar hook-associated protein FliD [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
Length = 394
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 100 VDRANERIEKLLAS-TEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
+D A + + L S T+Q +N DET+A+ K Q Q++T K N S LTQ+
Sbjct: 331 IDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTA 390
Query: 159 LRKS 162
+ KS
Sbjct: 391 MNKS 394
>gi|332031613|gb|EGI71085.1| Programmed cell death protein 2 [Acromyrmex echinatior]
Length = 355
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 16/79 (20%)
Query: 73 DERAFLWNQYK-VMENDLTS-------KINSKRAEVDRANERIEKLLASTEQ-------- 116
++ +FL+ +Y+ VMEND T+ + NS+ E+++ N I+ A Q
Sbjct: 173 NDNSFLFPEYEIVMENDSTAMENVDQNEPNSEEKEIEKYNSIIQDGKAGIFQNEDVNDDL 232
Query: 117 LQLSNNEKDETIAKLKTQI 135
LQ++N+EKDET A+ + +I
Sbjct: 233 LQMANDEKDETFAEFRLKI 251
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.126 0.339
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,005,946,982
Number of Sequences: 23463169
Number of extensions: 152839446
Number of successful extensions: 623084
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 1743
Number of HSP's that attempted gapping in prelim test: 617384
Number of HSP's gapped (non-prelim): 7412
length of query: 292
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 151
effective length of database: 9,050,888,538
effective search space: 1366684169238
effective search space used: 1366684169238
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 76 (33.9 bits)