BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022776
(292 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8IBP1|YPF16_PLAF7 Uncharacterized protein PF07_0086 OS=Plasmodium falciparum (isolate
3D7) GN=PF07_0086 PE=4 SV=1
Length = 3429
Score = 43.9 bits (102), Expect = 0.001, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 41/78 (52%)
Query: 80 NQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQME 139
N+ K EN++ ++N EV++ NE + K+ ++ N+ DE + K+ ++ +M
Sbjct: 772 NEKKKGENEMNKEVNKMNEEVNKMNEEVNKMNEEVNKMNKEVNKMDEEVNKMNKEVNKMN 831
Query: 140 TGSKKWNTEISRLTQELE 157
S + N E + + ++ E
Sbjct: 832 KESNEMNKEANEMNKDEE 849
>sp|Q27802|DYHC2_TRIGR Cytoplasmic dynein 2 heavy chain 1 OS=Tripneustes gratilla GN=DYH1B
PE=2 SV=2
Length = 4318
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 100 VDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELELL 159
VD R +KL +L+ ++ ETIA + I ++E ++WN ++S L ELE L
Sbjct: 3148 VDEYKRRFQKLNEEAAKLKYELEKEQETIASAENLIGKLEGEYQRWNNQVSELNTELETL 3207
Query: 160 RK 161
K
Sbjct: 3208 PK 3209
>sp|P16328|FLID_SALTY Flagellar hook-associated protein 2 OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=fliD PE=1 SV=2
Length = 467
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 100 VDRANERIEKLLAS-TEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELEL 158
+D A + + L S T+Q +N DET+A+ K Q Q++T K N S LTQ+
Sbjct: 404 IDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTA 463
Query: 159 LRKS 162
+ KS
Sbjct: 464 MNKS 467
>sp|P02567|MYO1_CAEEL Myosin-1 OS=Caenorhabditis elegans GN=let-75 PE=2 SV=3
Length = 1938
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 7 AQELIHLLDAAKSDMVVGLKLREASLLKLMLEYTDDQLADFMAWFDLLRQKPKDGEPKSI 66
AQE I L A K + LK +EA + L + D+Q A + L ++ K+ + I
Sbjct: 1069 AQETIDELSAIKLETDASLKKKEADIHALGVRIEDEQ-----ALANRLTRQSKENAQRII 1123
Query: 67 EVSAFLDERAFLWNQYKVMENDLTSKINSKRAEVDRA----NERIEKLLASTEQLQLSNN 122
E+ L+ E SK + RAE+ R NER+++ E Q +N
Sbjct: 1124 EIEDELEH-----------ERQSRSKADRARAELQRELDELNERLDEQNKQLEIQQDNNK 1172
Query: 123 EKDETIAKLKTQI--------AQMETGSKKWNTEISRLTQELELLRKSRT 164
+KD I K + + QM +K N +IS LT L+ L+KS+
Sbjct: 1173 KKDSEIIKFRRDLDEKNMANEDQMAMIRRKNNDQISALTNTLDALQKSKA 1222
>sp|Q21952|NUF2_CAEEL Kinetochore protein Nuf2 homolog OS=Caenorhabditis elegans
GN=him-10 PE=1 SV=1
Length = 490
Score = 35.4 bits (80), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 99 EVDRANERIEKLLASTEQLQLSNNEKDET----IAKLKTQIAQMETGSKKWNTEISRLTQ 154
E++ A +R+ + + EQL++ + +K E I ++ QIA ++T + EI++ Q
Sbjct: 335 EMETAQKRLVEQSETHEQLRIEHTQKSEERQRRIEEITEQIANLKTSQPDVSQEIAKKKQ 394
Query: 155 ELELLRKSRTASDTPVLNRCT-RIAGATTSNA----GDSVQNRSSTAGIKGRLRKSGSSS 209
EL L+ + + + + + N C +A NA V +TA + R S +
Sbjct: 395 ELLALKNAHSETISQITNSCQDAVAKFAKLNAMFKETQKVAFEKNTAAAREMERLKSSLT 454
Query: 210 VTPLSNYSTTTAQSLGGKNGDNV 232
LS+Y+ ++ G+N +N
Sbjct: 455 GRLLSDYTFGSSTIDAGENTENC 477
>sp|P32873|BEM3_YEAST GTPase-activating protein BEM3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BEM3 PE=1 SV=3
Length = 1128
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 88 DLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNT 147
+L ++ N R++ D++ E IEK S ++ S +E KLK Q+ + ET
Sbjct: 16 ELLAQYNDHRSKKDKSIEHIEKGTCSGKERNPSYDEIFTENIKLKLQVQEYET------- 68
Query: 148 EISRLTQELELLRKSRTAS 166
EI L + +++L+K+R AS
Sbjct: 69 EIESLEKVIDMLQKNREAS 87
>sp|A3KNA5|FIL1L_DANRE Filamin A-interacting protein 1-like OS=Danio rerio GN=filip1l PE=2
SV=1
Length = 1129
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 71 FLDERAFLWNQYKVMENDLTSKINSKRAEVDRANERIEKLLAST-----------EQLQL 119
+DER + + K+ME+ + + +AE D+ N EKL+ + E++ +
Sbjct: 492 LVDERKAMAEKLKMMEDKVQNSTGKLQAEQDKVNTVTEKLIEESKKTLRSKAELEEKMCV 551
Query: 120 SNNEKDETIAKLKTQ 134
+ E+DE AKLKT+
Sbjct: 552 ATRERDELKAKLKTE 566
>sp|Q49YA7|TIG_STAS1 Trigger factor OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=tig PE=3 SV=1
Length = 436
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 22/140 (15%)
Query: 19 SDMVVGLKLREASLLKLML--EYTDDQLADFMAWFDLLRQKPKDGEPKSIEVSAFLDERA 76
+ +VG+K E + + EY ++LA A F K K E K +V DE A
Sbjct: 201 EEQLVGVKTGEEKDVNVTFPEEYHAEELAGKEATF-----KTKVNEIKYKDVPELTDEIA 255
Query: 77 FLWNQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIA 136
N+L S+ N+ VD E + K L ++ NN+K+E I K A
Sbjct: 256 ----------NELDSEANT----VDEYKENLRKRLTEQKETDAENNQKEEAINKAANN-A 300
Query: 137 QMETGSKKWNTEISRLTQEL 156
++ NTE+ R+ QE
Sbjct: 301 SIDVPDAMINTELDRMVQEF 320
>sp|Q54G05|LRRX1_DICDI Putative leucine-rich repeat-containing protein DDB_G0290503
OS=Dictyostelium discoideum GN=DDB_G0290503 PE=4 SV=1
Length = 1492
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 72/130 (55%), Gaps = 15/130 (11%)
Query: 67 EVSAFLDERAFLWNQYKVMEN------DLTSKINSKRAEVDRANERIEKLLASTEQLQLS 120
E+ + L+E+ NQ ++EN +L SK+N K+ E+ N+ IE +S+++LQ
Sbjct: 705 ELQSKLNEKEININQ--LIENNQSSLDELQSKLNEKQNEI---NQLIENNQSSSDELQSK 759
Query: 121 NNEKDETIAKLKTQIAQM----ETGSKKWNTEISRLTQELELLRKSRTASDTPVLNRCTR 176
NEK + I++L++++ ++ E+ S + +++ +L+ EL+ + + D+ ++ +
Sbjct: 760 LNEKHQEISELQSKLNELIENNESSSDELQSKLIQLSDELKEKDEKLKSLDSIIIENQEK 819
Query: 177 IAGATTSNAG 186
+ T SN
Sbjct: 820 LVQLTKSNQD 829
>sp|Q91ZU6|DYST_MOUSE Dystonin OS=Mus musculus GN=Dst PE=1 SV=1
Length = 7389
Score = 32.3 bits (72), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 26/161 (16%)
Query: 46 DFMAWFDLLRQKPKDGEPKSIEVSAFLDERAFLWNQYKVMENDLTSKINSKRAEVDRANE 105
DF AW D +++ +D P +SA LD V+E+ L S+ + + +++N
Sbjct: 4783 DFQAWLDAKKEEQRDSPP----ISAKLD----------VLESLLNSQKDFGKTFTEQSN- 4827
Query: 106 RIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEI----SRLTQELELLRK 161
EK ++ E L L ++ A L+ Q+ M+T ++ ++ +L LE K
Sbjct: 4828 IYEKTISEGENLLLKTQGAEK--AALQLQLNTMKTDWDRFRKQVKEREEKLKDSLEKALK 4885
Query: 162 SRTASDT--PVLNRCTR-IAGATTSNAGDSVQNRSSTAGIK 199
R +T P ++RC + G T S D ++ SS A +K
Sbjct: 4886 YREQVETLRPWIDRCQHSLDGVTFSL--DPTESESSIAELK 4924
>sp|A0L516|LON_MAGSM Lon protease OS=Magnetococcus sp. (strain MC-1) GN=lon PE=3 SV=1
Length = 809
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 77 FLWNQYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIA 136
FL Q K ++ +L + + AE+DR ER+EKL S E Q E D ++A
Sbjct: 267 FLREQLKEIQKELGITKDDRTAEIDRFRERLEKLTLSEEAEQKIEEELD--------KLA 318
Query: 137 QMETGSKKWNT 147
+ETGS ++
Sbjct: 319 ILETGSSEYGV 329
>sp|Q8SS35|Y4A0_ENCCU Probable myosin havy chain ECU04_1000 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=ECU04_1000 PE=1 SV=1
Length = 1700
Score = 32.0 bits (71), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 89 LTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTE 148
L K+ K AEV+R E ++++ E+ E + TI +L+T+ M K+W E
Sbjct: 1004 LKEKVKEKDAEVERILEGMKRMEREGEERNRMLKENESTIDELRTRCLNM----KRWKDE 1059
Query: 149 ISRLTQELELLRK 161
+ L ++ E L+K
Sbjct: 1060 YAELREDYEALQK 1072
>sp|A8KB59|CC153_DANRE Coiled-coil domain-containing protein 153 OS=Danio rerio GN=ccdc153
PE=2 SV=1
Length = 202
Score = 32.0 bits (71), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 65 SIEVSAFLDERAFLWNQYKVMENDLTSKINSKRAEVDRANERIEKLLASTE-----QLQL 119
S E S D A L QYK ME DL SK + A VD +EK LA + + +L
Sbjct: 74 SQERSDMKDITADLNRQYKSMETDLQSKADKLEASVD----LLEKQLAECQVELKSEREL 129
Query: 120 SNN---EKDETIAKLKTQIAQMETGSKK 144
N EKD I+ L++++ ME +K
Sbjct: 130 RENTEAEKDAIISDLQSKLDSMERECEK 157
>sp|P90901|IFA1_CAEEL Intermediate filament protein ifa-1 OS=Caenorhabditis elegans
GN=ifa-1 PE=1 SV=2
Length = 575
Score = 31.6 bits (70), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 21/122 (17%)
Query: 62 EPKSIEVSAFLDE----RAFLWNQYKVMENDLTS-----KINSKRAEVDRANERIEKLLA 112
E + ++ +DE R + Q K M+++L + +K E DRA +I+ LL
Sbjct: 120 EGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRKLEDATKGREQDRA--KIDALLV 177
Query: 113 STEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRLTQELELLRKSRTASDTPVLN 172
+ LSN E + I+ LK +IAQ+E K+ E RL EL+ ++RT D LN
Sbjct: 178 T-----LSNLEAE--ISLLKRRIAQLEDEVKRIKQENQRLLSELQ---RARTDLDQETLN 227
Query: 173 RC 174
R
Sbjct: 228 RI 229
>sp|Q8NCM8|DYHC2_HUMAN Cytoplasmic dynein 2 heavy chain 1 OS=Homo sapiens GN=DYNC2H1 PE=1
SV=4
Length = 4307
Score = 31.2 bits (69), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 93 INSKRAEVDRANERIEKLLASTEQLQLSNNEKDETIAKLKTQIAQMETGSKKWNTEISRL 152
+NS +V E+ + + +L+ ++ ETI + I Q++ K+WN ++ +
Sbjct: 3134 LNSVGQKVSELKEKFQSRTSEAAKLEAEVSKAQETIKAAEVLINQLDREHKRWNAQVVEI 3193
Query: 153 TQELELLRK 161
T+EL L K
Sbjct: 3194 TEELATLPK 3202
>sp|Q9QYE6|GOGA5_MOUSE Golgin subfamily A member 5 OS=Mus musculus GN=Golga5 PE=1 SV=2
Length = 729
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 13/140 (9%)
Query: 81 QYKVMENDLTSKINSKRAEVDRANERIEKLLASTEQLQLSNNEKDE---TIAKLKTQIAQ 137
+++ ME DL N+ ++ + E I+KL LSN+ + E + +L + Q
Sbjct: 539 EFRYMEEDLHRTKNTLQSRIKDREEEIQKLRNQLTNKTLSNSSQSELESRLHQLTETLIQ 598
Query: 138 METGSKKWNTEISRLTQELELLRKS-RTASDTPVLNRCTRIAGATTSNAGDSVQN----- 191
+T + +TE + L +LE L + +AS P ++G S G ++N
Sbjct: 599 KQTMLESLSTEKNSLVFQLERLEQQVHSASSGPNSGSAINMSG-VDSGEGTRLRNVPVLF 657
Query: 192 ---RSSTAGIKGRLRKSGSS 208
++ AG+ G++RK+ SS
Sbjct: 658 NDTETNLAGMYGKVRKAASS 677
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.126 0.339
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,136,586
Number of Sequences: 539616
Number of extensions: 3720587
Number of successful extensions: 14891
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 406
Number of HSP's that attempted gapping in prelim test: 13758
Number of HSP's gapped (non-prelim): 1540
length of query: 292
length of database: 191,569,459
effective HSP length: 116
effective length of query: 176
effective length of database: 128,974,003
effective search space: 22699424528
effective search space used: 22699424528
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)