Query 022778
Match_columns 292
No_of_seqs 248 out of 1456
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 10:58:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022778.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022778hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2dmda2 g.37.1.1 (A:8-33) Zinc 60.0 1.1 8E-05 24.4 0.4 15 8-22 1-15 (26)
2 d2adra2 g.37.1.1 (A:131-161) A 48.9 1.5 0.00011 25.1 -0.3 14 9-22 2-15 (31)
3 d1njqa_ g.37.1.3 (A:) SUPERMAN 44.7 2.7 0.0002 25.2 0.4 13 5-17 2-14 (37)
4 d1joca1 g.50.1.1 (A:1348-1411) 31.4 5.4 0.00039 26.2 0.3 12 7-18 23-34 (64)
5 d1vfya_ g.50.1.1 (A:) vps27p p 29.2 6.2 0.00045 26.1 0.3 13 6-18 19-31 (67)
6 d1lpva_ g.62.1.1 (A:) DM domai 26.4 7.7 0.00056 24.8 0.4 21 9-29 8-33 (52)
7 d2dkta2 g.93.1.1 (A:82-137) RI 26.0 6.6 0.00048 25.5 -0.0 26 9-34 18-46 (56)
8 d1dvpa2 g.50.1.1 (A:149-220) H 24.2 8.6 0.00063 25.8 0.3 13 6-18 27-39 (72)
9 d2adra1 g.37.1.1 (A:102-130) A 22.8 11 0.00083 20.8 0.6 17 7-23 1-17 (29)
10 d2ayja1 g.41.8.7 (A:1-56) Ribo 20.5 19 0.0013 23.2 1.3 13 4-16 29-41 (56)
No 1
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.97 E-value=1.1 Score=24.37 Aligned_cols=15 Identities=27% Similarity=0.904 Sum_probs=12.5
Q ss_pred CCCCcccCccccCCc
Q 022778 8 CSHCSICNNCVQKFD 22 (292)
Q Consensus 8 s~HCs~C~~CV~rfD 22 (292)
.|.|.+|++|..|-|
T Consensus 1 phkc~~c~kcfsrkd 15 (26)
T d2dmda2 1 PHKCEVCGKCFSRKD 15 (26)
T ss_dssp CCCBTTTTBCCCCHH
T ss_pred CCccchhhhHhcchh
Confidence 367999999998876
No 2
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}
Probab=48.94 E-value=1.5 Score=25.12 Aligned_cols=14 Identities=29% Similarity=0.764 Sum_probs=12.4
Q ss_pred CCCcccCccccCCc
Q 022778 9 SHCSICNNCVQKFD 22 (292)
Q Consensus 9 ~HCs~C~~CV~rfD 22 (292)
..|.+|++|-.|.|
T Consensus 2 f~C~~C~R~FaRrD 15 (31)
T d2adra2 2 YPCGLCNRAFTRRD 15 (31)
T ss_dssp EECTTTCCEESSHH
T ss_pred cccccccchhhHHH
Confidence 57999999999887
No 3
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=44.74 E-value=2.7 Score=25.18 Aligned_cols=13 Identities=46% Similarity=1.078 Sum_probs=11.5
Q ss_pred CCCCCCCcccCcc
Q 022778 5 PPRCSHCSICNNC 17 (292)
Q Consensus 5 PpRs~HCs~C~~C 17 (292)
|+|.+-|++|++-
T Consensus 2 p~r~~~C~~C~k~ 14 (37)
T d1njqa_ 2 PPRSYTCSFCKRE 14 (37)
T ss_dssp CSSSEECTTTCCE
T ss_pred CCCccCCCCCCCc
Confidence 8999999999874
No 4
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.39 E-value=5.4 Score=26.17 Aligned_cols=12 Identities=42% Similarity=0.899 Sum_probs=9.3
Q ss_pred CCCCCcccCccc
Q 022778 7 RCSHCSICNNCV 18 (292)
Q Consensus 7 Rs~HCs~C~~CV 18 (292)
|-|||+.|++-+
T Consensus 23 rrHHCR~CG~v~ 34 (64)
T d1joca1 23 RRHHCRQCGNIF 34 (64)
T ss_dssp CCEECTTTCCEE
T ss_pred cccchhhhCCee
Confidence 678999888754
No 5
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.25 E-value=6.2 Score=26.11 Aligned_cols=13 Identities=31% Similarity=0.736 Sum_probs=9.9
Q ss_pred CCCCCCcccCccc
Q 022778 6 PRCSHCSICNNCV 18 (292)
Q Consensus 6 pRs~HCs~C~~CV 18 (292)
-|-|||+.||+-+
T Consensus 19 ~rkhhCr~CG~~f 31 (67)
T d1vfya_ 19 NRKHHCRSCGGVF 31 (67)
T ss_dssp BCCEECTTTCCEE
T ss_pred ccccccccCCCEe
Confidence 3679999998744
No 6
>d1lpva_ g.62.1.1 (A:) DM domain of Doublesex (dsx) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=26.36 E-value=7.7 Score=24.78 Aligned_cols=21 Identities=19% Similarity=0.523 Sum_probs=12.8
Q ss_pred CCCcccCc---cccC--CcccccccC
Q 022778 9 SHCSICNN---CVQK--FDHHCPWVG 29 (292)
Q Consensus 9 ~HCs~C~~---CV~r--fDHHCpWvg 29 (292)
-+|..|.| -+.. +-++|+|-+
T Consensus 8 p~CaRCrNHG~~~~lKgHKr~C~~~~ 33 (52)
T d1lpva_ 8 PNCARCRNHGLKITLKGHKRYCKFRY 33 (52)
T ss_dssp SSCHHHHTTTCCCTTTTCGGGCTTTT
T ss_pred CCCcccccCCceeecCCcccccCCCC
Confidence 56666644 3343 444999976
No 7
>d2dkta2 g.93.1.1 (A:82-137) RING finger and CHY zinc finger domain-containing protein 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.95 E-value=6.6 Score=25.50 Aligned_cols=26 Identities=27% Similarity=0.551 Sum_probs=14.4
Q ss_pred CCCcccCccccC---CcccccccCCcccc
Q 022778 9 SHCSICNNCVQK---FDHHCPWVGQCIGL 34 (292)
Q Consensus 9 ~HCs~C~~CV~r---fDHHCpWvgnCIG~ 34 (292)
+||..|+-|-.. --.||.=-+.|+..
T Consensus 18 yHC~~CgiCRvG~~~~ffHC~~C~~C~~~ 46 (56)
T d2dkta2 18 YHCESCGICRIGPKEDFFHCLKCNLCLTT 46 (56)
T ss_dssp EEETTTTEEEESCGGGEEEETTTTEEEEG
T ss_pred ccCCCCCceeecCCccccccCccccccCc
Confidence 566666666432 12466666666543
No 8
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=24.22 E-value=8.6 Score=25.77 Aligned_cols=13 Identities=31% Similarity=0.718 Sum_probs=9.9
Q ss_pred CCCCCCcccCccc
Q 022778 6 PRCSHCSICNNCV 18 (292)
Q Consensus 6 pRs~HCs~C~~CV 18 (292)
-|-|||+.|++.+
T Consensus 27 ~rrhhCr~CG~~~ 39 (72)
T d1dvpa2 27 NRKHHCRNCGQVF 39 (72)
T ss_dssp SCCEECTTTCCEE
T ss_pred cccccccccCCee
Confidence 3778999888754
No 9
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}
Probab=22.82 E-value=11 Score=20.76 Aligned_cols=17 Identities=24% Similarity=0.712 Sum_probs=12.3
Q ss_pred CCCCCcccCccccCCcc
Q 022778 7 RCSHCSICNNCVQKFDH 23 (292)
Q Consensus 7 Rs~HCs~C~~CV~rfDH 23 (292)
|.+.|.+|++.-.+-+|
T Consensus 1 kp~~C~~C~k~F~~~~~ 17 (29)
T d2adra1 1 RSFVCEVCTRAFARQEH 17 (29)
T ss_dssp CCBCCTTTCCCBSCHHH
T ss_pred CcCCCCCCCCCCCCchH
Confidence 56789999987665543
No 10
>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]}
Probab=20.45 E-value=19 Score=23.17 Aligned_cols=13 Identities=31% Similarity=0.899 Sum_probs=11.0
Q ss_pred cCCCCCCCcccCc
Q 022778 4 RPPRCSHCSICNN 16 (292)
Q Consensus 4 RPpRs~HCs~C~~ 16 (292)
-|+|+..|+.|+.
T Consensus 29 ~p~rAt~CRKCg~ 41 (56)
T d2ayja1 29 NPIRATKCRRCHS 41 (56)
T ss_dssp ECTTCSSCTTTCC
T ss_pred CCccccccccCCC
Confidence 4999999998875
Done!