Query 022779
Match_columns 292
No_of_seqs 155 out of 1491
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 06:04:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022779.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022779hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK13463 phosphatase PhoE; Pro 100.0 1E-37 2.3E-42 267.6 15.9 198 34-270 1-202 (203)
2 PRK14116 gpmA phosphoglyceromu 100.0 2.6E-37 5.7E-42 269.5 17.5 194 35-261 1-221 (228)
3 PRK14119 gpmA phosphoglyceromu 100.0 6.6E-37 1.4E-41 267.1 17.6 193 35-260 1-220 (228)
4 PRK03482 phosphoglycerate muta 100.0 2.2E-36 4.9E-41 261.6 17.3 197 35-271 1-206 (215)
5 PRK14117 gpmA phosphoglyceromu 100.0 2.8E-36 6.1E-41 263.3 17.6 193 35-260 1-220 (230)
6 PRK13462 acid phosphatase; Pro 100.0 1.2E-35 2.5E-40 254.6 18.9 189 33-270 3-197 (203)
7 PRK15004 alpha-ribazole phosph 100.0 5.7E-36 1.2E-40 256.0 15.9 185 36-260 1-187 (199)
8 PRK14118 gpmA phosphoglyceromu 100.0 1.4E-35 3.1E-40 258.4 17.0 191 36-259 1-218 (227)
9 PRK01112 phosphoglyceromutase; 100.0 2.7E-35 5.8E-40 256.5 17.6 208 35-261 1-220 (228)
10 PRK14120 gpmA phosphoglyceromu 100.0 4E-35 8.7E-40 258.3 18.5 194 34-260 3-221 (249)
11 TIGR03848 MSMEG_4193 probable 100.0 2.6E-35 5.6E-40 252.9 16.4 191 37-269 1-201 (204)
12 PRK01295 phosphoglyceromutase; 100.0 8.8E-35 1.9E-39 249.8 18.1 192 34-260 1-196 (206)
13 KOG4754 Predicted phosphoglyce 100.0 2.6E-34 5.7E-39 237.9 19.2 235 26-275 5-247 (248)
14 TIGR01258 pgm_1 phosphoglycera 100.0 1.3E-34 2.7E-39 254.8 17.1 192 36-260 1-219 (245)
15 PRK14115 gpmA phosphoglyceromu 100.0 1.8E-34 4E-39 254.0 18.2 195 36-263 1-222 (247)
16 TIGR03162 ribazole_cobC alpha- 100.0 9.3E-35 2E-39 243.8 14.9 175 38-254 1-177 (177)
17 COG0406 phoE Broad specificity 100.0 4.5E-34 9.8E-39 245.8 18.0 190 34-261 1-192 (208)
18 PRK07238 bifunctional RNase H/ 100.0 8.3E-34 1.8E-38 264.6 17.3 201 30-270 166-371 (372)
19 PTZ00322 6-phosphofructo-2-kin 100.0 2.9E-29 6.3E-34 249.2 17.4 215 35-271 419-637 (664)
20 PF00300 His_Phos_1: Histidine 100.0 2E-30 4.3E-35 212.3 7.4 155 37-226 1-158 (158)
21 smart00855 PGAM Phosphoglycera 100.0 3.8E-29 8.1E-34 205.4 12.3 151 37-226 1-155 (155)
22 KOG0235 Phosphoglycerate mutas 100.0 2.2E-28 4.8E-33 207.4 16.7 193 35-260 5-202 (214)
23 PTZ00123 phosphoglycerate muta 100.0 2.4E-28 5.2E-33 214.1 15.5 180 48-260 1-207 (236)
24 PTZ00122 phosphoglycerate muta 99.9 1.3E-26 2.9E-31 208.9 17.0 180 35-271 102-292 (299)
25 COG0588 GpmA Phosphoglycerate 99.9 4.4E-26 9.6E-31 189.9 11.1 193 35-260 1-220 (230)
26 cd07067 HP_PGM_like Histidine 99.9 1.2E-24 2.6E-29 177.9 14.8 143 37-259 1-144 (153)
27 cd07040 HP Histidine phosphata 99.9 6.9E-21 1.5E-25 154.9 14.4 141 37-259 1-144 (153)
28 TIGR00249 sixA phosphohistidin 99.8 1.2E-19 2.5E-24 148.7 16.2 142 36-260 1-142 (152)
29 PRK10848 phosphohistidine phos 99.8 3.3E-19 7.1E-24 147.0 16.4 139 36-257 1-139 (159)
30 KOG3734 Predicted phosphoglyce 99.8 6.1E-19 1.3E-23 154.0 14.9 179 33-234 10-217 (272)
31 KOG4609 Predicted phosphoglyce 99.8 3.1E-19 6.7E-24 148.6 11.8 178 34-273 93-279 (284)
32 COG2062 SixA Phosphohistidine 99.8 3.7E-18 8E-23 139.5 13.8 144 35-260 1-144 (163)
33 PRK06193 hypothetical protein; 99.8 7.6E-18 1.6E-22 143.5 13.3 142 26-230 32-174 (206)
34 KOG0234 Fructose-6-phosphate 2 99.7 2.1E-17 4.6E-22 152.2 14.5 180 34-258 238-419 (438)
35 PRK15416 lipopolysaccharide co 99.7 7.8E-17 1.7E-21 136.2 15.2 134 34-258 53-187 (201)
36 cd07061 HP_HAP_like Histidine 97.8 2.5E-05 5.4E-10 68.5 5.2 62 36-115 4-73 (242)
37 PF00328 His_Phos_2: Histidine 96.9 0.0027 5.8E-08 57.9 6.7 48 68-115 62-116 (347)
38 KOG3720 Lysosomal & prostatic 96.2 0.021 4.5E-07 54.2 8.1 78 36-115 36-127 (411)
39 PRK10173 glucose-1-phosphatase 96.2 0.023 4.9E-07 54.0 8.3 80 36-115 33-128 (413)
40 PRK10172 phosphoanhydride phos 95.2 0.084 1.8E-06 50.3 7.9 79 36-115 36-130 (436)
41 KOG1057 Arp2/3 complex-interac 91.1 0.19 4.2E-06 50.3 3.3 48 68-115 511-571 (1018)
42 PF12048 DUF3530: Protein of u 64.7 19 0.00041 32.8 6.2 42 193-234 174-215 (310)
43 PF14606 Lipase_GDSL_3: GDSL-l 46.1 21 0.00045 29.9 2.9 31 191-221 72-103 (178)
44 KOG3672 Histidine acid phospha 38.2 45 0.00098 31.4 4.0 46 68-113 168-224 (487)
45 COG1134 TagH ABC-type polysacc 34.1 64 0.0014 28.5 4.2 28 193-221 180-207 (249)
46 PF01764 Lipase_3: Lipase (cla 33.9 1.4E+02 0.0031 22.8 6.0 40 194-233 45-87 (140)
47 PLN02517 phosphatidylcholine-s 32.7 64 0.0014 32.3 4.3 34 188-221 188-222 (642)
48 COG1116 TauB ABC-type nitrate/ 29.1 91 0.002 27.5 4.3 35 194-228 164-198 (248)
49 COG1136 SalX ABC-type antimicr 27.6 1.3E+02 0.0028 26.2 5.0 36 194-229 176-211 (226)
50 PF03610 EIIA-man: PTS system 27.3 55 0.0012 24.8 2.4 18 213-230 1-18 (116)
51 PRK00865 glutamate racemase; P 27.1 3.4E+02 0.0073 23.9 7.7 58 161-221 21-78 (261)
52 TIGR00824 EIIA-man PTS system, 26.5 75 0.0016 24.3 3.0 19 213-231 3-21 (116)
53 PF02450 LCAT: Lecithin:choles 25.8 83 0.0018 29.6 3.8 30 191-220 98-127 (389)
54 PRK04946 hypothetical protein; 25.1 2.5E+02 0.0055 23.5 6.1 45 188-233 101-148 (181)
55 cd00006 PTS_IIA_man PTS_IIA, P 25.0 78 0.0017 24.3 2.9 18 213-230 2-19 (122)
56 PF13479 AAA_24: AAA domain 24.6 1.2E+02 0.0026 25.7 4.3 37 189-225 105-141 (213)
57 cd04256 AAK_P5CS_ProBA AAK_P5C 24.0 89 0.0019 28.1 3.5 29 196-225 33-61 (284)
58 PF04270 Strep_his_triad: Stre 23.7 49 0.0011 21.8 1.3 30 37-80 20-49 (53)
59 PRK14484 phosphotransferase ma 23.4 1.1E+02 0.0024 23.9 3.5 18 213-230 3-21 (124)
60 COG2893 ManX Phosphotransferas 22.2 90 0.002 25.0 2.8 19 213-231 3-21 (143)
61 PF09370 TIM-br_sig_trns: TIM- 21.8 76 0.0016 28.3 2.5 38 188-226 190-227 (268)
62 PF07819 PGAP1: PGAP1-like pro 21.2 1.6E+02 0.0036 25.3 4.5 33 188-220 55-93 (225)
63 cd00519 Lipase_3 Lipase (class 20.5 2.5E+02 0.0054 23.7 5.5 42 191-232 106-150 (229)
64 cd07397 MPP_DevT Myxococcus xa 20.4 1.1E+02 0.0023 26.9 3.1 35 189-225 126-160 (238)
65 COG4525 TauB ABC-type taurine 20.4 1.3E+02 0.0027 26.1 3.4 36 193-228 165-200 (259)
No 1
>PRK13463 phosphatase PhoE; Provisional
Probab=100.00 E-value=1e-37 Score=267.58 Aligned_cols=198 Identities=22% Similarity=0.242 Sum_probs=163.5
Q ss_pred ceeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcC
Q 022779 34 HCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFG 113 (292)
Q Consensus 34 ~~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~ 113 (292)
|+++||||||||+.+|..+.++| ..|++||+.|++||+.+++.|... +++.|||||+.||+|||+++..
T Consensus 1 m~~~i~lvRHG~t~~n~~~~~~G-------~~d~~Lt~~G~~Qa~~~~~~l~~~----~~~~i~sSpl~Ra~qTA~~i~~ 69 (203)
T PRK13463 1 MKTTVYVTRHGETEWNVAKRMQG-------RKNSALTENGILQAKQLGERMKDL----SIHAIYSSPSERTLHTAELIKG 69 (203)
T ss_pred CceEEEEEeCCCCccchhCcccC-------CCCCCcCHHHHHHHHHHHHHhcCC----CCCEEEECCcHHHHHHHHHHHh
Confidence 35789999999999999988764 679999999999999999999875 8899999999999999999976
Q ss_pred CCCCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCCH
Q 022779 114 GDGESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPF 192 (292)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~ 192 (292)
.++ .++.++++|+|+ +|.|+ |++..++.+.||.. +..+..+ +..+.+|+|||+
T Consensus 70 ~~~---------------------~~~~~~~~l~E~~~G~~e---G~~~~e~~~~~p~~-~~~~~~~-~~~~~~~~gEs~ 123 (203)
T PRK13463 70 ERD---------------------IPIIADEHFYEINMGIWE---GQTIDDIERQYPDD-IQLFWNE-PHLFQSTSGENF 123 (203)
T ss_pred cCC---------------------CCceECcCceeCCCCccC---CCcHHHHhhhCHHH-HHHHHhC-hhccCCCCCeEH
Confidence 541 477899999999 99997 89999999888865 4444332 234677899999
Q ss_pred HHHHHHHHHHHHHHHhc-CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeCCCCCC--CCCCC
Q 022779 193 EEVTARGMEFMKWLWTR-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRGS--CYPGT 269 (292)
Q Consensus 193 ~~~~~R~~~~~~~l~~~-~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~~~~~--n~~~h 269 (292)
.++..|+..+++.+.++ .+++|+|||||++|+++++++++.+....++ ...+.||+++.+++++++.... |.++|
T Consensus 124 ~~~~~R~~~~l~~i~~~~~~~~vlvVsHg~~ir~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~~~~~~~~~n~~~~ 201 (203)
T PRK13463 124 EAVHKRVIEGMQLLLEKHKGESILIVSHAAAAKLLVGHFAGIEIENVWD--DPFMHSASLSIIEFEDGKGEVKQFADISH 201 (203)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCCHHHHhh--ccCccCceEEEEEEeCCcEEEEEeccccc
Confidence 99999999999999876 5679999999999999999999875443221 1246899999999976553332 77777
Q ss_pred C
Q 022779 270 I 270 (292)
Q Consensus 270 l 270 (292)
|
T Consensus 202 l 202 (203)
T PRK13463 202 F 202 (203)
T ss_pred c
Confidence 6
No 2
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.6e-37 Score=269.48 Aligned_cols=194 Identities=17% Similarity=0.127 Sum_probs=157.3
Q ss_pred eeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCC
Q 022779 35 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 114 (292)
Q Consensus 35 ~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~ 114 (292)
|++|||||||||.+|..++++| +.|.|||+.|++||+++++.|++... +++.|||||+.||+|||++|++.
T Consensus 1 m~~l~LVRHGeT~~N~~~~~~G-------~~D~pLt~~G~~QA~~l~~~L~~~~~--~~d~i~sSpL~Ra~qTA~~i~~~ 71 (228)
T PRK14116 1 MAKLVLIRHGQSEWNLSNQFTG-------WVDVDLSEKGVEEAKKAGRLIKEAGL--EFDQAYTSVLTRAIKTLHYALEE 71 (228)
T ss_pred CCEEEEEeCCCCCCccccCcCC-------CCCCCcCHHHHHHHHHHHHHHHhcCC--CCCEEEECChHHHHHHHHHHHHh
Confidence 5789999999999999998864 78999999999999999999986433 79999999999999999999765
Q ss_pred CCCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccC-------------
Q 022779 115 DGESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESED------------- 180 (292)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~------------- 180 (292)
.+ ....++..+++|+|+ ||.|+ |++.+++.+.+|...+..|....
T Consensus 72 ~~------------------~~~~~~~~~~~LrE~~fG~wE---G~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~ 130 (228)
T PRK14116 72 SD------------------QLWIPETKTWRLNERHYGALQ---GLNKKETAEKYGDEQVHIWRRSYDVLPPLLDADDEG 130 (228)
T ss_pred cC------------------cCCCCcccCcccccccchhhc---CCCHHHHHHHhhhhHHHHHhhcccccCccccccccc
Confidence 41 011366788999999 99998 99999999888754222221110
Q ss_pred ----------CCCCCCCCCCCHHHHHHHHHHHHHHHHh---cCCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCcc
Q 022779 181 ----------DKLWKADAREPFEEVTARGMEFMKWLWT---RQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFT 247 (292)
Q Consensus 181 ----------~~~~~~~~gEs~~~~~~R~~~~~~~l~~---~~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~ 247 (292)
...+.+|+|||+.++.+|+..+++.++. .++++|||||||++|+++++++++.+.... +.+.+.
T Consensus 131 ~~~~~~~~~~~~~~~~pgGEs~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVsHg~vir~ll~~~~~~~~~~~---~~~~~~ 207 (228)
T PRK14116 131 SAAKDRRYANLDPRIIPGGENLKVTLERVIPFWEDHIAPDLLDGKNVIIAAHGNSLRALTKYIENISDEDI---MNLEMA 207 (228)
T ss_pred ccccchhhhccCccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCeEEEEcChHHHHHHHHHHhCCCHHHH---HhccCC
Confidence 0123578999999999999999998764 256899999999999999999998754432 346899
Q ss_pred CceEEEEEEEeCCC
Q 022779 248 NCEIRSVVIVDQSI 261 (292)
Q Consensus 248 n~~i~~~~~~~~~~ 261 (292)
||+++.|+++++..
T Consensus 208 ~~~~~~~~~~~~~~ 221 (228)
T PRK14116 208 TGEPVVYDFDEKLN 221 (228)
T ss_pred CCCeEEEEECCCCC
Confidence 99999999998764
No 3
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=6.6e-37 Score=267.09 Aligned_cols=193 Identities=18% Similarity=0.162 Sum_probs=155.8
Q ss_pred eeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCC
Q 022779 35 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 114 (292)
Q Consensus 35 ~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~ 114 (292)
|++|||||||||.+|..++++| +.|.+||+.|++||+++++.|...+. +++.|||||+.||+|||++|++.
T Consensus 1 m~~l~LvRHGeT~~N~~~~~~G-------~~D~pLt~~G~~QA~~l~~~L~~~~~--~~d~i~sSpL~Ra~~TA~~i~~~ 71 (228)
T PRK14119 1 MPKLILCRHGQSEWNAKNLFTG-------WEDVNLSEQGINEATRAGEKVRENNI--AIDVAFTSLLTRALDTTHYILTE 71 (228)
T ss_pred CCEEEEEeCCCCCcccCCCccC-------CCCCCcCHHHHHHHHHHHHHHHhcCC--CCCEEEeCccHHHHHHHHHHHHh
Confidence 5789999999999999988864 78999999999999999999986433 79999999999999999999764
Q ss_pred CCCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccCC------------
Q 022779 115 DGESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDD------------ 181 (292)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~------------ 181 (292)
.+ ....++..+++|+|+ ||.|+ |++.+++.+.+|...+..|....+
T Consensus 72 ~~------------------~~~~~~~~~~~LrE~~fG~we---G~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~ 130 (228)
T PRK14119 72 SK------------------QQWIPVYKSWRLNERHYGGLQ---GLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQRE 130 (228)
T ss_pred cc------------------cCCCCeeECCCcccccccccc---CCcHHHHHHHccHHHHHHHHcccccCCCcccccccc
Confidence 41 011467889999999 99998 999999998887532323321100
Q ss_pred -----------CCCCCCCCCCHHHHHHHHHHHHHHHHhc---CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCcc
Q 022779 182 -----------KLWKADAREPFEEVTARGMEFMKWLWTR---QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFT 247 (292)
Q Consensus 182 -----------~~~~~~~gEs~~~~~~R~~~~~~~l~~~---~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~ 247 (292)
....+|+|||+.++..|+..+++.++.. ++++|||||||++|+++++++++.+.... +.+.+.
T Consensus 131 ~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~vir~l~~~~~~~~~~~~---~~~~~~ 207 (228)
T PRK14119 131 AYLADRRYNHLDKRMMPYSESLKDTLVRVIPFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDI---INYEIK 207 (228)
T ss_pred cccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHhhccCCCeEEEEeChHHHHHHHHHHhCCCHHHH---hhcCCC
Confidence 0123578999999999999999998643 56899999999999999999998754332 246799
Q ss_pred CceEEEEEEEeCC
Q 022779 248 NCEIRSVVIVDQS 260 (292)
Q Consensus 248 n~~i~~~~~~~~~ 260 (292)
||++++|+++++.
T Consensus 208 ~~~~~~~~~~~~~ 220 (228)
T PRK14119 208 TGAPLVYELTDDL 220 (228)
T ss_pred CCceEEEEECCCC
Confidence 9999999998764
No 4
>PRK03482 phosphoglycerate mutase; Provisional
Probab=100.00 E-value=2.2e-36 Score=261.55 Aligned_cols=197 Identities=23% Similarity=0.157 Sum_probs=158.1
Q ss_pred eeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCC
Q 022779 35 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 114 (292)
Q Consensus 35 ~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~ 114 (292)
|++||||||||+.+|..+.+++ ..|++||+.|++||+.+++.|.+. +++.|||||+.||+|||++|++.
T Consensus 1 m~~i~lvRHG~t~~n~~~~~~g-------~~d~~Lt~~G~~qA~~~~~~l~~~----~~~~I~sSpl~Ra~qTA~~i~~~ 69 (215)
T PRK03482 1 MLQVYLVRHGETQWNAERRIQG-------QSDSPLTAKGEQQAMQVAERAKEL----GITHIISSDLGRTRRTAEIIAQA 69 (215)
T ss_pred CcEEEEEeCCCcccccccccCC-------CCCCCcCHHHHHHHHHHHHHHhcC----CCCEEEECCcHHHHHHHHHHHHh
Confidence 6789999999999999877653 679999999999999999999875 78999999999999999999876
Q ss_pred CCCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCCHH
Q 022779 115 DGESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFE 193 (292)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~~ 193 (292)
++ .++.++++|+|+ +|.|+ |++.+++...++.+ ..........+.+|+|||+.
T Consensus 70 ~~---------------------~~~~~~~~L~E~~~G~~e---g~~~~~~~~~~~~~--~~~~~~~~~~~~~p~gEs~~ 123 (215)
T PRK03482 70 CG---------------------CDIIFDPRLRELNMGVLE---KRHIDSLTEEEEGW--RRQLVNGTVDGRIPEGESMQ 123 (215)
T ss_pred cC---------------------CCeeEChhccccCCcccc---CCcHHHHHhhHHHH--HHhhhcCCCccCCCCCccHH
Confidence 62 467889999999 99997 77877775443322 11110112335678999999
Q ss_pred HHHHHHHHHHHHHHhc-CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeCC----CC---CCC
Q 022779 194 EVTARGMEFMKWLWTR-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQS----IR---GSC 265 (292)
Q Consensus 194 ~~~~R~~~~~~~l~~~-~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~----~~---~~n 265 (292)
++..|+..+++.+... .+++|||||||++|+++++++++.+.... ..+.+.||+|+.|++..+. .+ ..|
T Consensus 124 ~~~~Rv~~~l~~~~~~~~~~~vliVsHg~~i~~l~~~l~~~~~~~~---~~~~~~n~sis~~~~~~~~~~~~~~~~~~~n 200 (215)
T PRK03482 124 ELSDRMHAALESCLELPQGSRPLLVSHGIALGCLVSTILGLPAWAE---RRLRLRNCSISRVDYQESPWLASGWVVETAG 200 (215)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHhCCChhhh---hccCCCCcEEEEEEEeCCccccceEEEEeeC
Confidence 9999999999998765 45789999999999999999998754432 2468999999999997642 11 128
Q ss_pred CCCCCC
Q 022779 266 YPGTIS 271 (292)
Q Consensus 266 ~~~hl~ 271 (292)
..+||.
T Consensus 201 ~~~hl~ 206 (215)
T PRK03482 201 DVSHLD 206 (215)
T ss_pred ChhhhC
Confidence 899984
No 5
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.8e-36 Score=263.28 Aligned_cols=193 Identities=18% Similarity=0.130 Sum_probs=154.4
Q ss_pred eeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCC
Q 022779 35 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 114 (292)
Q Consensus 35 ~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~ 114 (292)
|++|||||||||.+|..++++| +.|.+||+.|++||+.+++.|..... +++.|||||+.||+|||++++..
T Consensus 1 m~~l~LvRHG~t~~n~~~~~qG-------~~D~~Lt~~G~~qa~~~~~~l~~~~~--~~~~i~sSpl~Ra~~TA~~i~~~ 71 (230)
T PRK14117 1 MVKLVFARHGESEWNKANLFTG-------WADVDLSEKGTQQAIDAGKLIKEAGI--EFDLAFTSVLKRAIKTTNLALEA 71 (230)
T ss_pred CCEEEEEeCccccCcccCCcCC-------CCCCCcCHHHHHHHHHHHHHHHHcCC--CCCEEEECCcHHHHHHHHHHHHh
Confidence 6789999999999999998864 78999999999999999999986433 78999999999999999998643
Q ss_pred CCCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCccccccccc--------------
Q 022779 115 DGESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESE-------------- 179 (292)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~-------------- 179 (292)
.. ....++.++++|+|+ ||.|+ |++.+++.+.+|...+..|...
T Consensus 72 ~~------------------~~~~~~~~~~~LrE~~fG~wE---G~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~ 130 (230)
T PRK14117 72 SD------------------QLWVPVEKSWRLNERHYGGLT---GKNKAEAAEQFGDEQVHIWRRSYDVLPPAMAKDDEY 130 (230)
T ss_pred cc------------------cCCCCceeCCccccccchhhc---CCCHHHHHHHccHHHHHHHhcccccCCCcccccccc
Confidence 20 011467788999999 99998 9999999988885322222211
Q ss_pred ---------CCCCCCCCCCCCHHHHHHHHHHHHHHHH-hc--CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCcc
Q 022779 180 ---------DDKLWKADAREPFEEVTARGMEFMKWLW-TR--QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFT 247 (292)
Q Consensus 180 ---------~~~~~~~~~gEs~~~~~~R~~~~~~~l~-~~--~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~ 247 (292)
......+|+|||+.++.+|+..+++.++ .. .+++|||||||++|+++++++++.+.... +.+.++
T Consensus 131 ~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~~ir~ll~~~lg~~~~~~---~~~~~~ 207 (230)
T PRK14117 131 SAHTDRRYASLDDSVIPDAENLKVTLERALPFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKGLSDDEI---MDVEIP 207 (230)
T ss_pred cccccccccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHHHHHHHHHHhCcCHHHH---hhcCCC
Confidence 0012356899999999999999999976 22 35799999999999999999998754332 245799
Q ss_pred CceEEEEEEEeCC
Q 022779 248 NCEIRSVVIVDQS 260 (292)
Q Consensus 248 n~~i~~~~~~~~~ 260 (292)
||++++|+++++.
T Consensus 208 n~s~~~i~~~~~~ 220 (230)
T PRK14117 208 NFPPLVFEFDEKL 220 (230)
T ss_pred CceEEEEEECCCC
Confidence 9999999996654
No 6
>PRK13462 acid phosphatase; Provisional
Probab=100.00 E-value=1.2e-35 Score=254.64 Aligned_cols=189 Identities=19% Similarity=0.146 Sum_probs=155.1
Q ss_pred cceeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCcc--EEEEcchhHHHHHHHH
Q 022779 33 QHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKID--LVITSPLLRTLQTAVG 110 (292)
Q Consensus 33 ~~~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~--~I~sSpl~Ra~qTA~~ 110 (292)
.+|++|||||||||.+|..++++| ..|.|||+.|++||+.+++.|... +++ .|||||+.||+|||++
T Consensus 3 ~~~~~i~LvRHG~t~~n~~~~~~G-------~~d~pLt~~G~~QA~~l~~~l~~~----~~~~~~i~sSpl~Ra~qTA~~ 71 (203)
T PRK13462 3 VRNHRLLLLRHGETEWSKSGRHTG-------RTELELTETGRTQAELAGQALGEL----ELDDPLVISSPRRRALDTAKL 71 (203)
T ss_pred ccccEEEEEeCCCCCcccCCCccC-------CCCCCCCHHHHHHHHHHHHHHHhC----CCCCCEEEECchHHHHHHHHH
Confidence 478899999999999999888764 689999999999999999999876 555 7999999999999998
Q ss_pred hcCCCCCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCC
Q 022779 111 VFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAR 189 (292)
Q Consensus 111 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g 189 (292)
+ .+ ....++++|+|+ ||.|+ |++..++.+.+|.+ ..|. ...|+|
T Consensus 72 i--~~----------------------~~~~~~~~LrE~~~G~~e---G~~~~ei~~~~~~~--~~~~------~~~p~g 116 (203)
T PRK13462 72 A--GL----------------------TVDEVSGLLAEWDYGSYE---GLTTPQIRESEPDW--LVWT------HGCPGG 116 (203)
T ss_pred h--cC----------------------cccccCccccccCCcccc---CCcHHHHHHhCchH--Hhhc------CCCCCC
Confidence 8 22 122568899999 99997 88999999888863 1121 234789
Q ss_pred CCHHHHHHHHHHHHHHHHhc-CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeCCCCCC--CC
Q 022779 190 EPFEEVTARGMEFMKWLWTR-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRGS--CY 266 (292)
Q Consensus 190 Es~~~~~~R~~~~~~~l~~~-~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~~~~~--n~ 266 (292)
||+.+++.|+..+++.+.++ ++++|+|||||++|+++++++++.+.... +.+.+.||+++.+++.++..... |.
T Consensus 117 ES~~~~~~Rv~~~l~~i~~~~~~~~vliVsHg~vir~ll~~~l~~~~~~~---~~~~~~~~s~s~~~~~~~~~~~~~~~~ 193 (203)
T PRK13462 117 ESVAQVNERADRAVALALEHMESRDVVFVSHGHFSRAVITRWVELPLAEG---SRFAMPTASIAICGFEHGVRQLSALGL 193 (203)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhCCCHHHh---hhcccCCceEEEEEeeCCceEEEeecc
Confidence 99999999999999999865 56789999999999999999999754332 34689999999999977654332 66
Q ss_pred CCCC
Q 022779 267 PGTI 270 (292)
Q Consensus 267 ~~hl 270 (292)
++|+
T Consensus 194 ~~~~ 197 (203)
T PRK13462 194 TGHP 197 (203)
T ss_pred CCCC
Confidence 6663
No 7
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=100.00 E-value=5.7e-36 Score=256.03 Aligned_cols=185 Identities=21% Similarity=0.166 Sum_probs=153.9
Q ss_pred eEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCCC
Q 022779 36 KILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD 115 (292)
Q Consensus 36 ~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~~ 115 (292)
|+|||||||||.+|..+.++| ..|+|||+.|++||+.+++.|.+. +++.|||||+.||+|||++|++..
T Consensus 1 ~~i~lvRHG~t~~n~~~~~~G-------~~d~pLt~~G~~Qa~~~~~~l~~~----~~~~i~sSpl~Ra~qTA~~i~~~~ 69 (199)
T PRK15004 1 MRLWLVRHGETQANVDGLYSG-------HAPTPLTARGIEQAQNLHTLLRDV----PFDLVLCSELERAQHTARLVLSDR 69 (199)
T ss_pred CeEEEEeCCCCccccCCcEeC-------CCCCCcCHHHHHHHHHHHHHHhCC----CCCEEEECchHHHHHHHHHHHhcC
Confidence 479999999999999887754 689999999999999999999875 789999999999999999998765
Q ss_pred CCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCCHHH
Q 022779 116 GESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEE 194 (292)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~ 194 (292)
+ .++.++++|+|+ +|.|+ |++..++...+|.. +..|... +....+++|||+.+
T Consensus 70 ~---------------------~~~~~~~~L~E~~~G~~e---g~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~gEs~~~ 123 (199)
T PRK15004 70 Q---------------------LPVHIIPELNEMFFGDWE---MRHHRDLMQEDAEN-YAAWCND-WQHAIPTNGEGFQA 123 (199)
T ss_pred C---------------------CCceeChhheeCCCcccC---CCCHHHHHHHCHHH-HHHHHhC-hhhcCCCCCcCHHH
Confidence 2 467889999999 99997 88888887777653 3333221 12234678999999
Q ss_pred HHHHHHHHHHHHHhc-CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeCC
Q 022779 195 VTARGMEFMKWLWTR-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQS 260 (292)
Q Consensus 195 ~~~R~~~~~~~l~~~-~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~ 260 (292)
++.|+..+++.+.+. ++++|||||||++|+++++++++.+.... +.+.+.||+++.++++++.
T Consensus 124 ~~~Rv~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~ 187 (199)
T PRK15004 124 FSQRVERFIARLSAFQHYQNLLIVSHQGVLSLLIARLLGMPAEAM---WHFRVEQGCWSAIDINQGF 187 (199)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEcChHHHHHHHHHHhCCCHHHH---hccccCCceEEEEEecCCc
Confidence 999999999999865 56899999999999999999998754332 3467899999999996543
No 8
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.4e-35 Score=258.40 Aligned_cols=191 Identities=16% Similarity=0.115 Sum_probs=153.0
Q ss_pred eEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCCC
Q 022779 36 KILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD 115 (292)
Q Consensus 36 ~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~~ 115 (292)
|+|||||||||.+|..++++| +.|.|||+.|++||+.+++.|.+... +++.|||||+.||+|||++|+...
T Consensus 1 m~l~LvRHG~t~~n~~~~~~G-------~~d~~Lt~~G~~qa~~~~~~l~~~~~--~~d~i~sSpl~Ra~~TA~~i~~~~ 71 (227)
T PRK14118 1 MELVFIRHGFSEWNAKNLFTG-------WRDVNLTERGVEEAKAAGKKLKEAGY--EFDIAFTSVLTRAIKTCNIVLEES 71 (227)
T ss_pred CEEEEEecCCCccccccCcCC-------CCCCCCCHHHHHHHHHHHHHHHhcCC--CCCEEEEeChHHHHHHHHHHHHhc
Confidence 479999999999999988864 78999999999999999999986433 789999999999999999997644
Q ss_pred CCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccC--------------
Q 022779 116 GESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESED-------------- 180 (292)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~-------------- 180 (292)
+ ....++..+++|+|+ ||.|+ |++.+++.+.+|...+..|....
T Consensus 72 ~------------------~~~~~~~~~~~LrE~~fG~wE---G~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~ 130 (227)
T PRK14118 72 N------------------QLWIPQVKNWRLNERHYGALQ---GLDKKATAEQYGDEQVHIWRRSYDTLPPDLDPQDPNS 130 (227)
T ss_pred C------------------CCCCCeecCCccccccCcccc---CCcHHHHHHHhhHHHHHHHHhccccCCCccccccccc
Confidence 1 011367788999999 99998 99999998888753222221110
Q ss_pred ---------CCCCCCCCCCCHHHHHHHHHHHHHHHHhc---CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccC
Q 022779 181 ---------DKLWKADAREPFEEVTARGMEFMKWLWTR---QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTN 248 (292)
Q Consensus 181 ---------~~~~~~~~gEs~~~~~~R~~~~~~~l~~~---~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n 248 (292)
.....+|+|||+.++.+|+..+++.++.. ++++|||||||++|+++++.+++.+.... +.+.++|
T Consensus 131 ~~~~~~~~~~~~~~~p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHggvir~ll~~~l~~~~~~~---~~~~i~~ 207 (227)
T PRK14118 131 AHNDRRYAHLPADVVPDAENLKVTLERVLPFWEDQIAPALLSGKRVLVAAHGNSLRALAKHIEGISDADI---MDLEIPT 207 (227)
T ss_pred cccchhhccCcCCCCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHH---hcccCCC
Confidence 01134689999999999999999987652 56899999999999999999998654332 2468899
Q ss_pred ceEEEEEEEeC
Q 022779 249 CEIRSVVIVDQ 259 (292)
Q Consensus 249 ~~i~~~~~~~~ 259 (292)
|+++.|+++++
T Consensus 208 ~s~~~~~~~~~ 218 (227)
T PRK14118 208 GQPLVYKLDDN 218 (227)
T ss_pred CceEEEEECCC
Confidence 99999999765
No 9
>PRK01112 phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.7e-35 Score=256.50 Aligned_cols=208 Identities=21% Similarity=0.214 Sum_probs=158.2
Q ss_pred eeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCC
Q 022779 35 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 114 (292)
Q Consensus 35 ~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~ 114 (292)
|++||||||||+.+|..+.++| +.|.+||+.|++||++++++|.+. +++.|||||+.||+|||+.|++.
T Consensus 1 M~~L~LvRHGqt~~n~~~~~~G-------~~D~~Lte~G~~Qa~~l~~~L~~~----~~d~iysSpl~Ra~qTA~~i~~~ 69 (228)
T PRK01112 1 MALLILLRHGQSVWNAKNLFTG-------WVDIPLSQQGIAEAIAAGEKIKDL----PIDCIFTSTLVRSLMTALLAMTN 69 (228)
T ss_pred CcEEEEEeCCCCccccccccCC-------CCCCCcCHHHHHHHHHHHHHhhcC----CCCEEEEcCcHHHHHHHHHHHHh
Confidence 6789999999999999887764 789999999999999999999875 89999999999999999999753
Q ss_pred CCCCCCCCC----C--CCCcc--cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccCCCCCC
Q 022779 115 DGESQTDGI----D--AHPSL--TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWK 185 (292)
Q Consensus 115 ~~~~~~~~~----~--~~~~~--~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (292)
++....... . ..+.. .++......++...++|+|+ +|.|+ |++.+++.+.+|...+..|.. +..+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~E~~~G~~e---G~~~~ei~~~~~~~~~~~w~~--~~~~~ 144 (228)
T PRK01112 70 HSSGKIPYIVHEEDDKKWMSRIYSDEEPEQMIPLFQSSALNERMYGELQ---GKNKAETAEKFGEEQVKLWRR--SYKTA 144 (228)
T ss_pred hcccccccccccccccccccccccccccccCCCeeecCccccccccccC---CCCHHHHHHHCcHHHHHHHhC--cCCCC
Confidence 210000000 0 00000 00000112467889999999 99997 999999999888543334432 23356
Q ss_pred CCCCCCHHHHHHHHHHHHHHHH-hc--CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeCCC
Q 022779 186 ADAREPFEEVTARGMEFMKWLW-TR--QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSI 261 (292)
Q Consensus 186 ~~~gEs~~~~~~R~~~~~~~l~-~~--~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~~ 261 (292)
+|+|||+.++..|+..+++.++ +. .+++|+|||||++|+++++.+++.+.... ..+.+.||+++.|+++.++.
T Consensus 145 ~p~GES~~d~~~Rv~~~l~~~~~~~~~~~~~ilVVsHg~vir~l~~~ll~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 220 (228)
T PRK01112 145 PPQGESLEDTGQRTLPYFQNRILPHLQQGKNVFVSAHGNSLRSLIMDLEKLSEEEV---LSLELPTGKPIVYEWTGQKF 220 (228)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHH---hhcccCCcceEEEEECCCCc
Confidence 8999999999999999999764 32 56899999999999999999998765432 24689999999999977664
No 10
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=4e-35 Score=258.26 Aligned_cols=194 Identities=18% Similarity=0.137 Sum_probs=155.1
Q ss_pred ceeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcC
Q 022779 34 HCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFG 113 (292)
Q Consensus 34 ~~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~ 113 (292)
+|++|||||||||.+|..+.+++ +.|.+||+.|++||+++++.|..... .++.|||||+.||+|||++|++
T Consensus 3 ~m~~i~LVRHGqt~~n~~~~~~G-------~~D~pLTe~G~~QA~~~a~~l~~~~~--~~~~IysSpl~Ra~qTA~~i~~ 73 (249)
T PRK14120 3 MTYTLVLLRHGESEWNAKNLFTG-------WVDVDLTEKGEAEAKRGGELLAEAGV--LPDVVYTSLLRRAIRTANLALD 73 (249)
T ss_pred CCcEEEEEeCCCCcccccCCcCC-------CCCCCcCHHHHHHHHHHHHHHHhcCC--CCCEEEecChHHHHHHHHHHHH
Confidence 67899999999999999888764 78999999999999999999986433 6899999999999999999975
Q ss_pred CCCCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccC------------
Q 022779 114 GDGESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESED------------ 180 (292)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~------------ 180 (292)
..+ ....++..+++|+|+ ||.|+ |++..++.+.+|...+..|....
T Consensus 74 ~~~------------------~~~~~i~~~~~L~E~~fG~~e---G~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~ 132 (249)
T PRK14120 74 AAD------------------RLWIPVRRSWRLNERHYGALQ---GKDKAETKAEYGEEQFMLWRRSYDTPPPPIEDGSE 132 (249)
T ss_pred hcc------------------cCCCCeEECCCcccccccccC---CCCHHHHHHHccHHHHHHHHhccccCCCccccccc
Confidence 431 012477889999999 99997 99999999888753233332110
Q ss_pred -----CCCC----CCCCCCCHHHHHHHHHHHHHHHH-hc--CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccC
Q 022779 181 -----DKLW----KADAREPFEEVTARGMEFMKWLW-TR--QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTN 248 (292)
Q Consensus 181 -----~~~~----~~~~gEs~~~~~~R~~~~~~~l~-~~--~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n 248 (292)
+..+ .+|+|||+.++.+|+..+++.++ .. ++++|||||||++|+++++++++.+... .+.+.+.|
T Consensus 133 ~~~~~d~~~~~~~~~p~GES~~~~~~Rv~~~l~~~~~~~~~~~~~iliVsHggvir~l~~~~~~~~~~~---~~~~~i~~ 209 (249)
T PRK14120 133 YSQDNDPRYADLGVGPRTECLKDVVARFLPYWEDDIVPDLKAGKTVLIAAHGNSLRALVKHLDGISDED---IAGLNIPT 209 (249)
T ss_pred cccccCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCEEEEEeCHHHHHHHHHHHhCCCHHH---hheeccCC
Confidence 0111 14799999999999999999853 32 5688999999999999999999876443 23568999
Q ss_pred ceEEEEEEEeCC
Q 022779 249 CEIRSVVIVDQS 260 (292)
Q Consensus 249 ~~i~~~~~~~~~ 260 (292)
|+++.|+++++.
T Consensus 210 ~~~~~~~~~~~~ 221 (249)
T PRK14120 210 GIPLVYELDEDF 221 (249)
T ss_pred CceEEEEECCCC
Confidence 999999997653
No 11
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=100.00 E-value=2.6e-35 Score=252.91 Aligned_cols=191 Identities=21% Similarity=0.191 Sum_probs=153.7
Q ss_pred EEEEEeCcCCccCCcCCCCCCcccCCcCC-CCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCCC
Q 022779 37 ILHLVRHGQGVHNMEGNNGPEALLSQEFF-DAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD 115 (292)
Q Consensus 37 ~i~lVRHGes~~n~~~~~~~~~~~~~~~~-D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~~ 115 (292)
+||||||||+.+|..+.++| .. |.|||+.|++||+++++.|... +++.|||||+.||+|||++|++.+
T Consensus 1 ~i~lvRHG~t~~n~~~~~~g-------~~~d~~Lt~~G~~qa~~l~~~l~~~----~~~~i~sSpl~Ra~qTA~~i~~~~ 69 (204)
T TIGR03848 1 TVILVRHGRSTANTAGTLAG-------RTPGVDLDERGREQAAALAERLADL----PIAAIVSSPLERCRETAEPIAEAR 69 (204)
T ss_pred CEEEEeCCCCCccccccccC-------CCCCCCcCHHHHHHHHHHHHHHhcC----CCCEEEeCcHHHHHHHHHHHHHhc
Confidence 48999999999999888765 45 5899999999999999999865 899999999999999999998765
Q ss_pred CCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCCHHH
Q 022779 116 GESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEE 194 (292)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~ 194 (292)
+ .++.++++|+|+ +|.|+ |++.+++.+. + .+..+... ...+.+|+|||+.+
T Consensus 70 ~---------------------~~~~~~~~L~E~~~G~~e---G~~~~e~~~~-~--~~~~~~~~-~~~~~~p~gEs~~~ 121 (204)
T TIGR03848 70 G---------------------LPPRVDERLGECDYGDWT---GRELKELAKE-P--LWPVVQAH-PSAAVFPGGESLAQ 121 (204)
T ss_pred C---------------------CCceECcccccCCCCeeC---CcCHHHHhCc-H--HHHHHhcC-cccCCCCCCCCHHH
Confidence 2 467899999999 99997 8888887643 1 12222211 12345688999999
Q ss_pred HHHHHHHHHHHHHhc------CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeCCCCCC--CC
Q 022779 195 VTARGMEFMKWLWTR------QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRGS--CY 266 (292)
Q Consensus 195 ~~~R~~~~~~~l~~~------~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~~~~~--n~ 266 (292)
+..|+..+++.+.++ .+++|||||||++|+++++.+++.+.... +.+.+.||+|+++++.+++.... |.
T Consensus 122 ~~~R~~~~l~~~~~~~~~~~~~~~~vliVsHg~~ir~ll~~~lg~~~~~~---~~~~~~n~sit~l~~~~~~~~~~~~n~ 198 (204)
T TIGR03848 122 VQARAVAAVREHDARLAAEHGPDAVWVACSHGDVIKSVLADALGMHLDLF---QRIVVDPCSVSVVRYTPLRPFVLRVND 198 (204)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCCEEEEEeCChHHHHHHHHHhCCCHHHh---heeeeCCCeEEEEEEeCCceEEEEeec
Confidence 999999999998754 45789999999999999999999754332 24689999999999987654332 66
Q ss_pred CCC
Q 022779 267 PGT 269 (292)
Q Consensus 267 ~~h 269 (292)
++|
T Consensus 199 ~~~ 201 (204)
T TIGR03848 199 TGG 201 (204)
T ss_pred ccc
Confidence 655
No 12
>PRK01295 phosphoglyceromutase; Provisional
Probab=100.00 E-value=8.8e-35 Score=249.83 Aligned_cols=192 Identities=19% Similarity=0.198 Sum_probs=156.0
Q ss_pred ceeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcC
Q 022779 34 HCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFG 113 (292)
Q Consensus 34 ~~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~ 113 (292)
|.++||||||||+.+|..+.++ ++.|.+||+.|++||+.+++.|.+.+. +++.|||||+.||+|||++|++
T Consensus 1 ~~~~i~LVRHGet~~n~~~~~~-------G~~d~~Lt~~G~~qA~~~~~~L~~~~~--~~d~i~sSpl~Ra~qTA~~i~~ 71 (206)
T PRK01295 1 MSRTLVLVRHGQSEWNLKNLFT-------GWRDPDLTEQGVAEAKAAGRKLKAAGL--KFDIAFTSALSRAQHTCQLILE 71 (206)
T ss_pred CCceEEEEeCCCCcccccCCcC-------CCCCCCcCHHHHHHHHHHHHHHHhCCC--CCCEEEeCCcHHHHHHHHHHHH
Confidence 4578999999999999988775 468999999999999999999986433 7999999999999999999987
Q ss_pred CCCCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCCH
Q 022779 114 GDGESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPF 192 (292)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~ 192 (292)
.++ .+..++.++++|+|+ +|.|+ |++.+++.+.+|......|.. +..+.+|+|||+
T Consensus 72 ~~~------------------~~~~~~~~~~~L~E~~~G~~e---g~~~~e~~~~~~~~~~~~~~~--~~~~~~p~GES~ 128 (206)
T PRK01295 72 ELG------------------QPGLETIRDQALNERDYGDLS---GLNKDDARAKWGEEQVHIWRR--SYDVPPPGGESL 128 (206)
T ss_pred HcC------------------CCCCCeEECCccccccccccc---CCcHHHHHHHchHHHHHHhhc--ccCCCCcCCCCH
Confidence 662 122578899999999 99997 899999999887542333322 234678899999
Q ss_pred HHHHHHHHHH-HHHHHhc--CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeCC
Q 022779 193 EEVTARGMEF-MKWLWTR--QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQS 260 (292)
Q Consensus 193 ~~~~~R~~~~-~~~l~~~--~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~ 260 (292)
.++.+|+..+ ++.+... .+++|||||||++|+++++++++.+.... +.+.+.|+++..+.+....
T Consensus 129 ~~~~~Rv~~~~~~~i~~~~~~~~~vliVtHg~~ir~l~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~ 196 (206)
T PRK01295 129 KDTGARVLPYYLQEILPRVLRGERVLVAAHGNSLRALVMVLDGLTPEQI---LKLELATGVPIVYRLNADS 196 (206)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeEEEEcChHHHHHHHHHHhCCCHHHH---hhcCCCCCCcEEEEecCCC
Confidence 9999999997 4566543 56899999999999999999998764432 3467889988888885443
No 13
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-34 Score=237.90 Aligned_cols=235 Identities=47% Similarity=0.776 Sum_probs=198.6
Q ss_pred hcccccccceeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHH
Q 022779 26 AKHLYSLQHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTL 105 (292)
Q Consensus 26 ~~~~~~~~~~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~ 105 (292)
+.-++++.+.++||||||||..+|+.+.-.++.||+..+.|+.||+.|++|+.+++..+...++...++.|+||||+||.
T Consensus 5 ~i~l~t~~r~KtiyLvRHgQg~HNV~g~~~h~ay~s~~~fD~~LTplG~~Qv~~l~~~~~A~qL~~~ieliv~SPMrRtL 84 (248)
T KOG4754|consen 5 GIGLYTKNRCKTIYLVRHGQGIHNVAGEEDHKAYWSEDYFDPHLTPLGWKQVDNLRKHLMAKQLPNKIELIVVSPMRRTL 84 (248)
T ss_pred ccCccccCcceEEEEEeccccccccCcccchhhhhhhhccccccCHHHHHHHHHHhhhhhhhhcCCceeEEEechHHHHH
Confidence 44567778899999999999999999988888899999999999999999999999999988886779999999999999
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCcccccccCCCCCeeecCch----hhhcCCCCCCCCCChhHHHhhCCCcccccccccCC
Q 022779 106 QTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELC----RERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDD 181 (292)
Q Consensus 106 qTA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~E~~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~ 181 (292)
||+.+.+...+ +..+ .+..++.+.|.+ ||-+|.++||.+...+.+.+.||..+|+....+.+
T Consensus 85 qT~v~~f~~~~--~e~g------------~~~~p~~vsp~~i~~~rE~lG~hpCD~r~~v~~~~~lfp~~DFs~~~~dv~ 150 (248)
T KOG4754|consen 85 QTMVIAFGGYL--AEDG------------EDPAPVKVSPPFIAVCRETLGDHPCDRRSSVTDLMKLFPAYDFSLCETDVD 150 (248)
T ss_pred HHHHHHhccee--ccCC------------CcCCceeecchHHHHHHHHhCCCcccccchhHHHHhhcccccceeeccCcc
Confidence 99999886652 1111 122455555655 99999999999999999999999999999988888
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeCCC
Q 022779 182 KLWKADAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSI 261 (292)
Q Consensus 182 ~~~~~~~gEs~~~~~~R~~~~~~~l~~~~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~~ 261 (292)
..|.+...|...+...|-+.+++++..++.+.|.||||+++|+.++..+-..+...+..+. ..+.||+...|.+-+...
T Consensus 151 ~~~~pdy~ed~e~~a~r~re~~~~l~~r~ek~iavvths~fl~~llk~i~k~cd~dv~~~~-~~~~Nce~r~~~i~Dr~~ 229 (248)
T KOG4754|consen 151 PLKKPDYREDDEESAARSREFLEWLAKRPEKEIAVVTHSGFLRSLLKKIQKDCDPDVKPEI-LSFSNCEHRSFVIVDRGM 229 (248)
T ss_pred hhccCcchhhHHHHHHhHHHHHHHHHhCccceEEEEEehHHHHHHHHHhccccCcccchhh-hccCCCcCCceeEeeeee
Confidence 8999999999999999999999999999999999999999999999988776665554443 455899999997766554
Q ss_pred CCC----CCCCCCCCCCC
Q 022779 262 RGS----CYPGTISGELR 275 (292)
Q Consensus 262 ~~~----n~~~hl~~~~~ 275 (292)
.+. |+.+..+++.+
T Consensus 230 ~~~d~~~n~p~~~~~~~~ 247 (248)
T KOG4754|consen 230 LGTDSVTNVPGKIADGGD 247 (248)
T ss_pred eccccceecCCcccCcCC
Confidence 332 77777776654
No 14
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=100.00 E-value=1.3e-34 Score=254.79 Aligned_cols=192 Identities=18% Similarity=0.147 Sum_probs=153.8
Q ss_pred eEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCCC
Q 022779 36 KILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD 115 (292)
Q Consensus 36 ~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~~ 115 (292)
|+|||||||||.+|..+++++ +.|.+||+.|++||+.+++.|...+. +++.|||||++||+|||++|+..+
T Consensus 1 ~~l~lVRHGqt~~n~~~~~~G-------~~D~~Lt~~G~~QA~~la~~L~~~~~--~~d~iysSpl~Ra~qTA~ii~~~~ 71 (245)
T TIGR01258 1 MKLVLVRHGESEWNALNLFTG-------WVDVKLSEKGQQEAKRAGELLKEEGY--EFDVAYTSLLKRAIHTLNIALDEL 71 (245)
T ss_pred CEEEEEeCCCcCccccCCcCC-------CCCCCcCHHHHHHHHHHHHHHHhcCC--CCCEEEEcChHHHHHHHHHHHHhc
Confidence 479999999999999988764 68999999999999999999986533 789999999999999999998765
Q ss_pred CCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCccccccccc---------------
Q 022779 116 GESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESE--------------- 179 (292)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~--------------- 179 (292)
+ ....++..+++|+|+ ||.|+ |++.+++...+|...+..|...
T Consensus 72 ~------------------~~~~~i~~~~~L~E~~~G~~e---G~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~ 130 (245)
T TIGR01258 72 D------------------QLWIPVKKSWRLNERHYGALQ---GLNKAETAAKYGEEQVNIWRRSFDVPPPPIDESDPRS 130 (245)
T ss_pred C------------------CCCCCeeeCcccccccCCCCc---CCCHHHHHHHhhHHHHHHHHhhccCCCCcCCcccccc
Confidence 1 011366778999999 99997 9999999888875322222110
Q ss_pred --CCCCC------CCCCCCCHHHHHHHHHHHHHHHHhc---CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccC
Q 022779 180 --DDKLW------KADAREPFEEVTARGMEFMKWLWTR---QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTN 248 (292)
Q Consensus 180 --~~~~~------~~~~gEs~~~~~~R~~~~~~~l~~~---~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n 248 (292)
.+..| ..|+|||+.++..|+..+++.++.. ++++|||||||++|+++++++++.+.... +.+.+.|
T Consensus 131 ~~~d~~y~~~~~~~~p~GES~~~~~~Rv~~~l~~l~~~~~~~~~~vlvVsHg~vir~l~~~l~~l~~~~~---~~~~~~~ 207 (245)
T TIGR01258 131 PHNDPRYAHLDPKVLPLTESLKDTIARVLPYWNDEIAPDLLSGKRVLIVAHGNSLRALVKHLEGISDEEI---LELNIPT 207 (245)
T ss_pred cccChhhhcCCcccCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCEEEEEcChHHHHHHHHHHHCcCHHHH---hheecCC
Confidence 01112 2678999999999999999998642 56799999999999999999998754432 2467899
Q ss_pred ceEEEEEEEeCC
Q 022779 249 CEIRSVVIVDQS 260 (292)
Q Consensus 249 ~~i~~~~~~~~~ 260 (292)
|+++.++++++.
T Consensus 208 ~~~~~~~~~~~~ 219 (245)
T TIGR01258 208 GIPLVYELDENL 219 (245)
T ss_pred CceEEEEECCCC
Confidence 999999996664
No 15
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.8e-34 Score=254.03 Aligned_cols=195 Identities=19% Similarity=0.141 Sum_probs=155.7
Q ss_pred eEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCCC
Q 022779 36 KILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD 115 (292)
Q Consensus 36 ~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~~ 115 (292)
|+|||||||||.+|..++++| +.|.|||+.|++||+.+++.|...+. +++.|||||+.||+|||++|+..+
T Consensus 1 ~~i~LVRHGqt~~n~~~~~~G-------~~D~pLte~G~~QA~~la~~L~~~~~--~~d~IysSpl~Ra~qTA~~i~~~~ 71 (247)
T PRK14115 1 TKLVLIRHGESQWNKENRFTG-------WTDVDLSEKGVSEAKAAGKLLKEEGY--TFDVAYTSVLKRAIRTLWIVLDEL 71 (247)
T ss_pred CEEEEEECCCcccccccCcCC-------CCCCCcCHHHHHHHHHHHHHHHhcCC--CCCEEEEcCCHHHHHHHHHHHHHc
Confidence 579999999999999888764 68999999999999999999986543 789999999999999999998765
Q ss_pred CCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccC--------------
Q 022779 116 GESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESED-------------- 180 (292)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~-------------- 180 (292)
+ ....++..+++|+|+ ||.|+ |++.+++.+.+|...+..|....
T Consensus 72 ~------------------~~~~~~~~~~~L~E~~fG~~e---G~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (247)
T PRK14115 72 D------------------QMWLPVEKSWRLNERHYGALQ---GLNKAETAAKYGDEQVKIWRRSYDVPPPALEKDDERY 130 (247)
T ss_pred C------------------CCCCCceECcccccccccccc---CCCHHHHHHHhhHHHHHHHhcccccCCCccccccccc
Confidence 1 111367889999999 99998 99999998877643222221100
Q ss_pred ---CC------CCCCCCCCCHHHHHHHHHHHHHHHHh---cCCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccC
Q 022779 181 ---DK------LWKADAREPFEEVTARGMEFMKWLWT---RQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTN 248 (292)
Q Consensus 181 ---~~------~~~~~~gEs~~~~~~R~~~~~~~l~~---~~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n 248 (292)
+. ...+|+|||+.++..|+..+++.++. .++++|||||||++|+++++++++.+.... +.+.+.|
T Consensus 131 ~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVtHggvir~l~~~ll~~~~~~~---~~~~~~~ 207 (247)
T PRK14115 131 PGHDPRYAKLPEEELPLTESLKDTIARVLPYWNETIAPQLKSGKRVLIAAHGNSLRALVKYLDNISDEEI---LELNIPT 207 (247)
T ss_pred ccccchhhcccCCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCHHHh---heeecCC
Confidence 01 12368999999999999999998753 256899999999999999999998754432 3568999
Q ss_pred ceEEEEEEEeCCCCC
Q 022779 249 CEIRSVVIVDQSIRG 263 (292)
Q Consensus 249 ~~i~~~~~~~~~~~~ 263 (292)
|+++.++++++....
T Consensus 208 ~~~~~l~~~~~~~~~ 222 (247)
T PRK14115 208 GVPLVYELDENLKPI 222 (247)
T ss_pred CceEEEEECCCCcEe
Confidence 999999997775443
No 16
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=100.00 E-value=9.3e-35 Score=243.77 Aligned_cols=175 Identities=25% Similarity=0.255 Sum_probs=147.4
Q ss_pred EEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCCCCC
Q 022779 38 LHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGE 117 (292)
Q Consensus 38 i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~~~~ 117 (292)
||||||||+.+|..+.+ + ..|++||+.|++||+.+++.|+.. +++.|||||+.||+|||++++..++
T Consensus 1 i~lvRHg~t~~n~~~~~-g-------~~d~~Lt~~G~~qa~~l~~~l~~~----~~~~i~sSpl~Ra~qTA~~i~~~~~- 67 (177)
T TIGR03162 1 LYLIRHGETDVNAGLCY-G-------QTDVPLAEKGAEQAAALREKLADV----PFDAVYSSPLSRCRELAEILAERRG- 67 (177)
T ss_pred CEEEeCCCCccCCCcee-C-------CCCCCcChhHHHHHHHHHHHhcCC----CCCEEEECchHHHHHHHHHHHhhcC-
Confidence 68999999999988765 3 579999999999999999999764 8999999999999999999987652
Q ss_pred CCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCCHHHHH
Q 022779 118 SQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVT 196 (292)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~~ 196 (292)
.++.++++|+|+ +|.|+ |++.+++.+.+|. +..|... ...+.++++||+.++.
T Consensus 68 --------------------~~~~~~~~L~E~~~G~~~---g~~~~~~~~~~~~--~~~~~~~-~~~~~~~~gEs~~~~~ 121 (177)
T TIGR03162 68 --------------------LPIIKDPRLREMDFGDWE---GRSWDEIPEAYPE--LDAWAAD-WQHARPPGGESFADFY 121 (177)
T ss_pred --------------------CCceECCccccccCCccC---CCCHHHHHHhCHH--HHHHHhC-cccCCCcCCCCHHHHH
Confidence 467889999999 99997 8889999888872 3334322 2335678999999999
Q ss_pred HHHHHHHHHHHhc-CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEE
Q 022779 197 ARGMEFMKWLWTR-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSV 254 (292)
Q Consensus 197 ~R~~~~~~~l~~~-~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~ 254 (292)
.|+..+++.+.++ ++++|||||||++|+++++.+++.+.... +.+.+.||+|+.+
T Consensus 122 ~R~~~~~~~l~~~~~~~~vlvVsHg~~i~~l~~~~~~~~~~~~---~~~~~~n~~i~~l 177 (177)
T TIGR03162 122 QRVSEFLEELLKAHEGDNVLIVTHGGVIRALLAHLLGLPLEQW---WSFDVEYGSITLI 177 (177)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhCCCHHHH---hccccCCeeEEeC
Confidence 9999999999876 57899999999999999999998754332 3468999999874
No 17
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=100.00 E-value=4.5e-34 Score=245.76 Aligned_cols=190 Identities=25% Similarity=0.257 Sum_probs=160.0
Q ss_pred ceeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcC
Q 022779 34 HCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFG 113 (292)
Q Consensus 34 ~~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~ 113 (292)
+|++||||||||+.+|..+.++| +.|+|||+.|++||+.+++.|..... +++.||+||+.||+|||+++++
T Consensus 1 ~~~~i~lvRHGqt~~n~~~~~~G-------~~d~pLt~~G~~QA~~l~~~l~~~~~--~~~~i~sS~l~Ra~~TA~~~a~ 71 (208)
T COG0406 1 MMMRLYLVRHGETEWNVEGRLQG-------WTDSPLTEEGRAQAEALAERLAARDI--GFDAIYSSPLKRAQQTAEPLAE 71 (208)
T ss_pred CceEEEEEecCCccccccccccC-------CCCCCCCHHHHHHHHHHHHHHhhcCC--CCCEEEECchHHHHHHHHHHHH
Confidence 47899999999999999888864 78999999999999999999995332 8999999999999999999998
Q ss_pred CCCCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCCH
Q 022779 114 GDGESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPF 192 (292)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~ 192 (292)
.++ .++..++.|+|. +|.|+ |++..++.+.+|.. +..+..+ +..+.++++||+
T Consensus 72 ~~~---------------------~~~~~~~~l~E~~~G~~e---g~~~~e~~~~~p~~-~~~~~~~-~~~~~~~~gEs~ 125 (208)
T COG0406 72 ELG---------------------LPLEVDDRLREIDFGDWE---GLTIDELAEEPPEE-LAAWLAD-PYLAPPPGGESL 125 (208)
T ss_pred hcC---------------------CCceecCCeeEeeccccc---CCcHHHHHHhCHHH-HHHHhcC-ccccCCCCCCCH
Confidence 873 347889999999 99998 99999999998865 3333222 233455669999
Q ss_pred HHHHHHHHHHHHHHHhcCC-CEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeCCC
Q 022779 193 EEVTARGMEFMKWLWTRQE-KEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSI 261 (292)
Q Consensus 193 ~~~~~R~~~~~~~l~~~~~-~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~~ 261 (292)
.++..|+..++..+..... ++|+|||||++|++++.++++.+... ...+.+.||+|+.++++++..
T Consensus 126 ~~~~~R~~~~~~~~~~~~~~~~vlvVsHg~~ir~l~~~~~~~~~~~---~~~~~~~~~si~~l~~~~~~~ 192 (208)
T COG0406 126 ADVSKRVVAALAELLRSPPGNNVLVVSHGGVIRALLAYLLGLDLEE---LWRLRLDNASVTVLEFDDGRF 192 (208)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEEEChHHHHHHHHHhcCCChhh---HHhcCCCCceEEEEEeeCCCc
Confidence 9999999999999997643 47999999999999999999975431 235789999999999998863
No 18
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=100.00 E-value=8.3e-34 Score=264.59 Aligned_cols=201 Identities=18% Similarity=0.146 Sum_probs=166.4
Q ss_pred ccccceeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHH
Q 022779 30 YSLQHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAV 109 (292)
Q Consensus 30 ~~~~~~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~ 109 (292)
....+|++|||||||++.+|..+++++ ..|++||+.|++||+.+++.|.... +++.|||||+.||+|||+
T Consensus 166 ~~~~~~~~i~LvRHGet~~n~~~~~~g-------~~D~~Lt~~G~~QA~~l~~~l~~~~---~~d~i~sSpl~Ra~qTA~ 235 (372)
T PRK07238 166 GARGTPTRLLLLRHGQTELSVQRRYSG-------RGNPELTEVGRRQAAAAARYLAARG---GIDAVVSSPLQRARDTAA 235 (372)
T ss_pred CCCCCceEEEEEeCCCCCcccCCeeeC-------CCCCCcCHHHHHHHHHHHHHHhccC---CCCEEEECChHHHHHHHH
Confidence 445688999999999999999887653 6799999999999999999998641 689999999999999999
Q ss_pred HhcCCCCCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCC
Q 022779 110 GVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADA 188 (292)
Q Consensus 110 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 188 (292)
.+++.++ .++.+.++|+|+ +|.|+ |++.+++.+.+|.. +..|..+ ..+.+|+
T Consensus 236 ~i~~~~~---------------------~~~~~~~~L~E~~~G~~e---g~~~~ei~~~~p~~-~~~w~~~--~~~~~p~ 288 (372)
T PRK07238 236 AAAKALG---------------------LDVTVDDDLIETDFGAWE---GLTFAEAAERDPEL-HRAWLAD--TSVAPPG 288 (372)
T ss_pred HHHHhcC---------------------CCcEECccceeCCCCccC---CCCHHHHHHHCHHH-HHHHHhC--CCCCCcC
Confidence 9987662 467889999999 99997 88999998888865 4445432 2467889
Q ss_pred CCCHHHHHHHHHHHHHHHHhc-CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeCCCCC---C
Q 022779 189 REPFEEVTARGMEFMKWLWTR-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRG---S 264 (292)
Q Consensus 189 gEs~~~~~~R~~~~~~~l~~~-~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~~~~---~ 264 (292)
+||+.++..|+..+++.|... .+++|+|||||++|+++++.+++.+... .+.+.+.||+++.+++..++... .
T Consensus 289 gEs~~~~~~Rv~~~l~~l~~~~~~~~vlvVtHg~~ir~ll~~~l~~~~~~---~~~~~~~~~~~s~l~~~~~~~~~~~~~ 365 (372)
T PRK07238 289 GESFDAVARRVRRARDRLIAEYPGATVLVVSHVTPIKTLLRLALDAGPGV---LYRLHLDLASLSIAEFYPDGPASVRLV 365 (372)
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCeEEEEEChHHHHHHHHHHhCCCHHH---hhhcccCCceEEEEEEECCCceEEEEe
Confidence 999999999999999999865 5679999999999999999999875432 22457899999999997554322 2
Q ss_pred CCCCCC
Q 022779 265 CYPGTI 270 (292)
Q Consensus 265 n~~~hl 270 (292)
|.++||
T Consensus 366 n~~~hl 371 (372)
T PRK07238 366 NDTSHL 371 (372)
T ss_pred cCCCCC
Confidence 888886
No 19
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.96 E-value=2.9e-29 Score=249.20 Aligned_cols=215 Identities=16% Similarity=0.088 Sum_probs=157.4
Q ss_pred eeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCC
Q 022779 35 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 114 (292)
Q Consensus 35 ~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~ 114 (292)
+|+|||||||||.+|..++++| |+|||+.|++||++++++|.+... ..++.|||||+.||+|||++|.+.
T Consensus 419 ~m~i~LiRHGeT~~n~~~r~~G---------d~pLt~~G~~qA~~l~~~l~~~~~-~~~~~V~sSpl~Ra~~TA~~i~~~ 488 (664)
T PTZ00322 419 PMNLYLTRAGEYVDLLSGRIGG---------NSRLTERGRAYSRALFEYFQKEIS-TTSFTVMSSCAKRCTETVHYFAEE 488 (664)
T ss_pred CceEEEEecccchhhhcCccCC---------CCccCHHHHHHHHHHHHHHHhccC-CCCcEEEcCCcHHHHHHHHHHHhc
Confidence 4579999999999999998853 789999999999999999986410 146799999999999999999653
Q ss_pred CCCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCCHH
Q 022779 115 DGESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFE 193 (292)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~~ 193 (292)
............+. .+ ..+ .++...++|+|+ ||.|+ |++++++.+.||.. +..|..+ +..+.+|+|||+.
T Consensus 489 ~~~~~~~~~~a~~~-~~--~~~-~~~~~~~~L~Ei~fG~wE---G~t~~ei~~~~p~~-~~~~~~d-~~~~~~P~GES~~ 559 (664)
T PTZ00322 489 SILQQSTASAASSQ-SP--SLN-CRVLYFPTLDDINHGDCE---GQLLSDVRRTMPNT-LQSMKAD-PYYTAWPNGECIH 559 (664)
T ss_pred cccccccccccccc-cc--ccc-ccccchhhhCcCCCcccC---CCCHHHHHHhCcHH-HHHHHhC-CCcCCCCCCcCHH
Confidence 10000000000000 00 111 367788999999 99998 99999999999976 5555433 2346778999999
Q ss_pred HHH-HHHHHHHHHHHhcCCCEEEEEechHHHHHHHHHhhcCCCC--CCCccCCCCccCceEEEEEEEeCCCCCCCCCCCC
Q 022779 194 EVT-ARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQT--SPNQELCPRFTNCEIRSVVIVDQSIRGSCYPGTI 270 (292)
Q Consensus 194 ~~~-~R~~~~~~~l~~~~~~~vliVsHg~~i~~ll~~~~~~~~~--~~~~~~~~~~~n~~i~~~~~~~~~~~~~n~~~hl 270 (292)
++. .|+..++..+.. ..++|||||||++|+++++++++.+.. .....+.+.+.+++++.|++.+. ...|+..||
T Consensus 560 d~~~~R~~~~i~~l~~-~~~~ilvVsHg~vir~ll~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~--~~~~~~~~l 636 (664)
T PTZ00322 560 QVFNARLEPHIHDIQA-STTPVLVVSHLHLLQGLYSYFVTDGDNIVAPQNAYKIDIPFEHVIKIRMVGF--NRVAELIDL 636 (664)
T ss_pred HHHHHHHHHHHHHHHc-cCCCEEEEeCcHHHHHHHHHHhcCCccccCcccCceeeccCCcEEEEEEecc--CceEEEEec
Confidence 966 799999999854 447899999999999999999985210 11112346789999999998753 223666776
Q ss_pred C
Q 022779 271 S 271 (292)
Q Consensus 271 ~ 271 (292)
.
T Consensus 637 ~ 637 (664)
T PTZ00322 637 S 637 (664)
T ss_pred h
Confidence 4
No 20
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=99.96 E-value=2e-30 Score=212.33 Aligned_cols=155 Identities=30% Similarity=0.412 Sum_probs=126.8
Q ss_pred EEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCCCC
Q 022779 37 ILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDG 116 (292)
Q Consensus 37 ~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~~~ 116 (292)
+|||||||++.+|..+..+ ++.|++||+.|+.||+.+++.|..... +++.|||||+.||+|||+++++.++
T Consensus 1 ~i~liRHg~~~~n~~~~~~-------~~~d~~Lt~~G~~qA~~~~~~l~~~~~--~~~~i~~Sp~~R~~qTA~~~~~~~~ 71 (158)
T PF00300_consen 1 RIYLIRHGESEFNAEGRVQ-------GDSDPPLTERGREQARQLGEYLAERDI--QIDVIYSSPLRRCIQTAEIIAEGLG 71 (158)
T ss_dssp EEEEEE-S-BHHHHTTBCG-------TTSSTGBEHHHHHHHHHHHHHHHHTTS--SCSEEEEESSHHHHHHHHHHHHHHT
T ss_pred CEEEEECCccccccCCCcC-------CCCCccccHHHHHHHHhhccccccccc--CceEEecCCcchhhhhhchhhcccc
Confidence 6999999999999877765 356779999999999999999995433 8999999999999999999987652
Q ss_pred CCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCCHHHH
Q 022779 117 ESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEV 195 (292)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~ 195 (292)
.++.+++.|+|+ +|.|+ +.+..++...++.. +..|.. .+..+.++++||+.++
T Consensus 72 ---------------------~~~~~~~~l~E~~~g~~~---g~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~Es~~~~ 125 (158)
T PF00300_consen 72 ---------------------IEIIVDPRLREIDFGDWE---GRPFDEIEEKFPDE-FEAWWS-DPYFYRPPGGESWEDF 125 (158)
T ss_dssp ---------------------SEEEEEGGGSCCGCGGGT---TSBHHHHHHHHHHH-HHHHHH-HTSSCGSTTSHHHHHH
T ss_pred ---------------------cccccccccccccchhhc---ccchhhHHhhhhcc-cchhhc-cccccccccCCCHHHH
Confidence 478899999999 87775 88888888887732 233322 2345677899999999
Q ss_pred HHHHHHHHHHHHh--cCCCEEEEEechHHHHHH
Q 022779 196 TARGMEFMKWLWT--RQEKEIAVVSHGIFLQQT 226 (292)
Q Consensus 196 ~~R~~~~~~~l~~--~~~~~vliVsHg~~i~~l 226 (292)
+.|+..+++.|.. .++++|||||||++|++|
T Consensus 126 ~~R~~~~~~~l~~~~~~~~~vliVsHg~~i~~~ 158 (158)
T PF00300_consen 126 QQRVKQFLDELIAYKRPGENVLIVSHGGFIRAL 158 (158)
T ss_dssp HHHHHHHHHHHHHHHHTTSEEEEEE-HHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEecHHHHHhC
Confidence 9999999999994 588999999999999985
No 21
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=99.96 E-value=3.8e-29 Score=205.37 Aligned_cols=151 Identities=25% Similarity=0.226 Sum_probs=123.3
Q ss_pred EEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCCCC
Q 022779 37 ILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDG 116 (292)
Q Consensus 37 ~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~~~ 116 (292)
+|||||||++.+|..+.+.+ ..|.+||+.|++||+.+++.|.... ..+++.|||||+.||+|||++++..++
T Consensus 1 ~i~lvRHG~s~~n~~~~~~g-------~~d~~Lt~~G~~qa~~~a~~l~~~~-~~~~~~i~sSpl~Ra~qTa~~i~~~~~ 72 (155)
T smart00855 1 RLYLIRHGETEANREGRLTG-------WTDSPLTELGRAQAEALGELLASLG-RLRFDVIYSSPLLRARETAEALAIALG 72 (155)
T ss_pred CEEEEeCCCCcccccCeEcC-------CCCCCCCHHHHHHHHHHHHHHHhcc-CCCCCEEEeCchHHHHHHHHHHHHhcC
Confidence 48999999999998766543 4899999999999999999998631 128999999999999999999987762
Q ss_pred CCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCCHHHH
Q 022779 117 ESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEV 195 (292)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~ 195 (292)
.+ ...+.|+|+ +|.|+ |++..++...++.. +.. +..+.+++|||+.++
T Consensus 73 ---------------------~~-~~~~~L~E~~~G~~~---g~~~~~~~~~~~~~-~~~-----~~~~~~~~gEs~~~~ 121 (155)
T smart00855 73 ---------------------LG-EVDPRLRERDYGAWE---GLTKEEERAKAWTR-PAD-----WLGAAPPGGESLADV 121 (155)
T ss_pred ---------------------CC-CCChhhhhcccceec---CCcHHHHHHHHHHH-Hhc-----cCCCCCcCCCCHHHH
Confidence 12 377899999 99997 88888887766543 111 234567899999999
Q ss_pred HHHHHHHHHHHHhc---CCCEEEEEechHHHHHH
Q 022779 196 TARGMEFMKWLWTR---QEKEIAVVSHGIFLQQT 226 (292)
Q Consensus 196 ~~R~~~~~~~l~~~---~~~~vliVsHg~~i~~l 226 (292)
+.|+..+++.+..+ .+++|||||||++|+++
T Consensus 122 ~~Rv~~~~~~i~~~~~~~~~~vlvVtHg~~ir~~ 155 (155)
T smart00855 122 VERLVRALEELIATHDKSGQNVLIVSHGGVIRAL 155 (155)
T ss_pred HHHHHHHHHHHHHhcccCCCeEEEEECCcccccC
Confidence 99999999999765 56789999999999863
No 22
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=2.2e-28 Score=207.35 Aligned_cols=193 Identities=19% Similarity=0.133 Sum_probs=154.6
Q ss_pred eeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCC
Q 022779 35 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 114 (292)
Q Consensus 35 ~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~ 114 (292)
..++++||||||.||..++++| +.|.+||+.|.+||++++++|.+.+. .++.+|+|++.||+|||+.|++.
T Consensus 5 ~~~lvlvRHGes~wN~e~~~~G-------~~D~~Lte~G~~qA~~~~~~l~~~~~--~~~~~~tS~l~RakqT~~~il~~ 75 (214)
T KOG0235|consen 5 TFRLVLVRHGESEWNKENIFQG-------WIDAPLTEKGEEQAKAAAQRLKDLNI--EFDVCYTSDLKRAKQTAELILEE 75 (214)
T ss_pred ceEEEEEecCchhhhhhCcccc-------cccCccChhhHHHHHHHHHHHHhcCC--cccEEecCHHHHHHHHHHHHHHh
Confidence 4689999999999999999974 89999999999999999999998865 78888999999999999999988
Q ss_pred CCCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCccc-ccccccCCCCCCCCCCCCH
Q 022779 115 DGESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDF-KLIESEDDKLWKADAREPF 192 (292)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~gEs~ 192 (292)
.. ....|+....+|+|+ +|.+. |+...++.+.++...+ ..+.-.....-.+|.+||+
T Consensus 76 ~~------------------~~~~pv~~~~~L~ER~yG~l~---Gl~~~e~~~~~g~~~~~~~~r~~~~~~~~~p~~EsL 134 (214)
T KOG0235|consen 76 LK------------------QKKVPVLYTWRLNERHYGDLQ---GLNKRETAKRYGEEQVYEDPRLSDLDEIPLPDGESL 134 (214)
T ss_pred hc------------------cCCcceEechhhchhhhcccc---CccHHHHHHHcchhccccchhhccCCcCCCCCCccH
Confidence 72 122688999999999 99997 9999999998885422 1111011122347889999
Q ss_pred HHHHHHHHHHHHHHHhc---CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeCC
Q 022779 193 EEVTARGMEFMKWLWTR---QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQS 260 (292)
Q Consensus 193 ~~~~~R~~~~~~~l~~~---~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~ 260 (292)
.++..|+..+++..+.. .+++|+||+||..+++++.++.+.....+. ...+.++-..+++++...
T Consensus 135 ~~~~~R~~~~~~e~i~~~~~~gk~Vli~aHGnsLR~i~~~l~g~s~~~i~---~~~~~t~vp~v~~ld~~~ 202 (214)
T KOG0235|consen 135 KDCLDRLLPFWNEEIAKESKEGKNVLIVAHGNSLRAIVKHLEGISDEAIK---ELNLPTGVPIVYELDKNK 202 (214)
T ss_pred HHHHHHHHHHHHHhhhhhhcCCcEEEEEcCcHHHHHHHHHHhcCCHhhhh---heecccCCceEEEccccc
Confidence 99999999999987643 578999999999999999999987654432 235566666666665544
No 23
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=99.96 E-value=2.4e-28 Score=214.10 Aligned_cols=180 Identities=21% Similarity=0.137 Sum_probs=140.7
Q ss_pred cCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCCCCCCCCCCCCCCC
Q 022779 48 HNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHP 127 (292)
Q Consensus 48 ~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~ 127 (292)
+|..++++ ++.|+|||+.|++||+.+++.|...+. +++.|||||+.||+|||++|++.++
T Consensus 1 ~N~~~~~q-------G~~D~pLTe~G~~QA~~l~~~L~~~~~--~~d~iysSpl~Ra~qTA~~i~~~~~----------- 60 (236)
T PTZ00123 1 WNKENRFT-------GWTDVPLSEKGVQEAREAGKLLKEKGF--RFDVVYTSVLKRAIKTAWIVLEELG----------- 60 (236)
T ss_pred CcccCcee-------CCCCCCCCHHHHHHHHHHHHHHHhcCC--CCCEEEECChHHHHHHHHHHHHhcC-----------
Confidence 45666665 478999999999999999999986544 7999999999999999999987651
Q ss_pred cccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccCC-----------------------CC
Q 022779 128 SLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDD-----------------------KL 183 (292)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~-----------------------~~ 183 (292)
....++..+++|+|+ +|.|+ |++.+++.+.+|...+..|..... ..
T Consensus 61 -------~~~~~~~~~~~L~E~~~G~~E---G~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (236)
T PTZ00123 61 -------QLHVPVIKSWRLNERHYGALQ---GLNKSETAEKHGEEQVKIWRRSYDIPPPPLEKSDERYPGNDPVYKDIPK 130 (236)
T ss_pred -------CCCCCceeCchhhhccccccc---CCCHHHHHHHccHHHHHHHhcccCCCCCCcccccccccccchhhhcccc
Confidence 112467789999999 99997 899999988877532222211000 01
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHh---cCCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeCC
Q 022779 184 WKADAREPFEEVTARGMEFMKWLWT---RQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQS 260 (292)
Q Consensus 184 ~~~~~gEs~~~~~~R~~~~~~~l~~---~~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~ 260 (292)
..+|+|||+.++..|+..+++.++. ..+++|||||||++|++++.++++.+.... +.+.+.||+++.|+++++.
T Consensus 131 ~~~p~gES~~~~~~Rv~~~l~~li~~~~~~~~~vliVsHG~vir~ll~~l~~~~~~~~---~~~~~~n~~~~~~~~~~~~ 207 (236)
T PTZ00123 131 DALPNTECLKDTVERVLPYWEDHIAPDILAGKKVLVAAHGNSLRALVKYLDKMSEEDI---LELNIPTGVPLVYELDENL 207 (236)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCHHHHHHHHHHHhCCCHHHH---hhccCCCCceEEEEECCCC
Confidence 2357899999999999999998653 256899999999999999999998754322 2468999999999997664
No 24
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.95 E-value=1.3e-26 Score=208.93 Aligned_cols=180 Identities=21% Similarity=0.159 Sum_probs=129.8
Q ss_pred eeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCC----CCCccEEEEcchhHHHHHHHH
Q 022779 35 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGL----TQKIDLVITSPLLRTLQTAVG 110 (292)
Q Consensus 35 ~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~----~~~~~~I~sSpl~Ra~qTA~~ 110 (292)
-++||||||||+..+. .. +..+.+||+.|++||+++++.|.+... ..++++||||||.||+|||++
T Consensus 102 ~~~L~LVRHGq~~~~~--~~--------d~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d~IysSPL~RA~qTAei 171 (299)
T PTZ00122 102 QRQIILVRHGQYINES--SN--------DDNIKRLTELGKEQARITGKYLKEQFGEILVDKKVKAIYHSDMTRAKETAEI 171 (299)
T ss_pred eeEEEEEECCCCCCCC--CC--------CcccCCCCHHHHHHHHHHHHHHHHhhccccccCCCCEEEEcCcHHHHHHHHH
Confidence 3789999999965431 10 112345999999999999999987411 016899999999999999999
Q ss_pred hcCCCCCCCCCCCCCCCcccccccCCCCCeeecCchhhhcCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCC
Q 022779 111 VFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADARE 190 (292)
Q Consensus 111 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gE 190 (292)
|++.+ +..++.++++|+|.. +..+. +. ...+.++++|
T Consensus 172 Ia~~~--------------------~~~~v~~d~~LrEG~---------~~~~~----~~----------~~~~~~~gee 208 (299)
T PTZ00122 172 ISEAF--------------------PGVRLIEDPNLAEGV---------PCAPD----PP----------SRGFKPTIEE 208 (299)
T ss_pred HHHhC--------------------CCCCceeCcccccCC---------ccccC----cc----------ccccCCCcch
Confidence 98655 225778899999931 10000 10 0113344555
Q ss_pred CHHHHHHHHHHHHHHHHhcC----CCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeCCCC---C
Q 022779 191 PFEEVTARGMEFMKWLWTRQ----EKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIR---G 263 (292)
Q Consensus 191 s~~~~~~R~~~~~~~l~~~~----~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~~~---~ 263 (292)
+ .+...|+..+++.+..+. ++++||||||++|+++++.+++.+... .+.+.+.||+|+.+++.+++.. .
T Consensus 209 ~-~~~~~Rv~~al~~i~~r~~~~~~~~vLVVsHGgvIR~ll~~lLglp~~~---~~~~~~~N~sit~l~~~~~g~~~l~~ 284 (299)
T PTZ00122 209 I-LEDMKRIEAAFEKYFHRPVEDEDSVEIIVCHGNVIRYLVCRALQLPPEA---WLRLSLYNCGITWIVISSEGHVSLSG 284 (299)
T ss_pred H-HHHHHHHHHHHHHHHHhcccCCCCeEEEEeCChHHHHHHHHHhCcCHHH---HhhccCCCceEEEEEEeCCCcEEEEE
Confidence 5 667999999999998642 367899999999999999999875332 2345789999999999754432 2
Q ss_pred CCCCCCCC
Q 022779 264 SCYPGTIS 271 (292)
Q Consensus 264 ~n~~~hl~ 271 (292)
.|..+|||
T Consensus 285 ~n~~~HL~ 292 (299)
T PTZ00122 285 FGSVGHLP 292 (299)
T ss_pred EeCCCCCC
Confidence 29999996
No 25
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=99.93 E-value=4.4e-26 Score=189.90 Aligned_cols=193 Identities=19% Similarity=0.162 Sum_probs=156.0
Q ss_pred eeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCC
Q 022779 35 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 114 (292)
Q Consensus 35 ~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~ 114 (292)
|++++|+|||||+||..+.+. +|.|..||+.|+.||...|+.|++.++ .||.+|+|-+.||++|+.+++++
T Consensus 1 ~~~Lvl~RHGqSeWN~~NlFt-------GW~Dv~LtekG~~EA~~ag~llk~~~~--~~dia~TS~L~RAi~T~~i~L~e 71 (230)
T COG0588 1 MMKLVLLRHGQSEWNKENLFT-------GWVDVDLTEKGISEAKAAGKLLKEEGL--EFDIAYTSVLKRAIKTLNIVLEE 71 (230)
T ss_pred CceEEEEecCchhhhhcCcee-------eeeecCcchhhHHHHHHHHHHHHHcCC--CcceeehHHHHHHHHHHHHHhhh
Confidence 578999999999999999886 599999999999999999999999877 99999999999999999999987
Q ss_pred CCCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccCC------------
Q 022779 115 DGESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDD------------ 181 (292)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~------------ 181 (292)
.. . ...|+.-.-+|+|+ +|.+. |.+..+..+.|.+..+..|....+
T Consensus 72 ~d-----------------~-~~ipv~kswrLNERhYG~Lq---GlnK~~t~~kyGeeqv~~wRRsydi~PP~~~~~~~~ 130 (230)
T COG0588 72 SD-----------------Q-LWIPVIKSWRLNERHYGALQ---GLNKAETAAKYGEEQVLIWRRSYDIPPPKLEKDDER 130 (230)
T ss_pred hc-----------------c-cCcchhhHHHhhhhhhhhhh---cCChHHHHHHHhHHHHHHHHHhcCCCCCCccccccc
Confidence 72 1 12466667799999 99885 888888888776554444432111
Q ss_pred -----CCCC------CCCCCCHHHHHHHHHHHHHHHHhc---CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCcc
Q 022779 182 -----KLWK------ADAREPFEEVTARGMEFMKWLWTR---QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFT 247 (292)
Q Consensus 182 -----~~~~------~~~gEs~~~~~~R~~~~~~~l~~~---~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~ 247 (292)
..|. .|..||+.+...|+..+++..+.. .+++|+||+||..+|+++.++.+.+...+. ...+.
T Consensus 131 ~~~~d~ry~~~~~~~~p~~EsLkdt~~Rv~Pyw~~~I~p~l~~Gk~VlI~AHGNSlRaLiK~L~~iSd~dI~---~l~IP 207 (230)
T COG0588 131 SPHRDRRYAHLDIGGLPLTESLKDTVERVLPYWEDDIAPNLKSGKNVLIVAHGNSLRALIKYLEGISDEDIL---DLNIP 207 (230)
T ss_pred ccccccccccccccCCCccchHHHHHHHhhHHHHHHhhHHHhCCCeEEEEecchhHHHHHHHHhCCCHHHhh---hcccC
Confidence 1111 134599999999999999887653 789999999999999999999998766553 35778
Q ss_pred CceEEEEEEEeCC
Q 022779 248 NCEIRSVVIVDQS 260 (292)
Q Consensus 248 n~~i~~~~~~~~~ 260 (292)
++-=.+|+++++.
T Consensus 208 tg~Plvyeld~~l 220 (230)
T COG0588 208 TGIPLVYELDKNL 220 (230)
T ss_pred CCCcEEEEECCCC
Confidence 8887888887665
No 26
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.92 E-value=1.2e-24 Score=177.90 Aligned_cols=143 Identities=31% Similarity=0.355 Sum_probs=114.7
Q ss_pred EEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCCCC
Q 022779 37 ILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDG 116 (292)
Q Consensus 37 ~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~~~ 116 (292)
+|||||||++.+|...... +..|.+||+.|++||+.+++.|..... +++.|||||+.||+|||+.+++.+
T Consensus 1 ~i~liRHg~~~~~~~~~~~-------~~~d~~Lt~~G~~qa~~~~~~l~~~~~--~~~~i~~Sp~~Ra~qTa~~l~~~~- 70 (153)
T cd07067 1 RLYLVRHGESEWNAEGRFQ-------GWTDVPLTEKGREQARALGKRLKELGI--KFDRIYSSPLKRAIQTAEIILEEL- 70 (153)
T ss_pred CEEEEECCCCcccccCccc-------CCCCCCCCHHHHHHHHHHHHHHHhcCC--CCCEEEECcHHHHHHHHHHHHHhc-
Confidence 4899999999988765432 367999999999999999999987543 789999999999999999997654
Q ss_pred CCCCCCCCCCCcccccccCCCCCeeecCchhhhcCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCCHHHHH
Q 022779 117 ESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVT 196 (292)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~~ 196 (292)
...++...+.|+|
T Consensus 71 -------------------~~~~~~~~~~L~e------------------------------------------------ 83 (153)
T cd07067 71 -------------------PGLPVEVDPRLRE------------------------------------------------ 83 (153)
T ss_pred -------------------CCCCceeCccchH------------------------------------------------
Confidence 0123333333333
Q ss_pred HHHHHHHHHHHhc-CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeC
Q 022779 197 ARGMEFMKWLWTR-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQ 259 (292)
Q Consensus 197 ~R~~~~~~~l~~~-~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~ 259 (292)
.|+..+++.+.+. .+++|+|||||++|+.++.++++.+.... +.+.+.||+++.+++..+
T Consensus 84 ~R~~~~~~~l~~~~~~~~iliV~H~~~i~~~~~~l~~~~~~~~---~~~~~~~~s~~~~~~~~~ 144 (153)
T cd07067 84 ARVLPALEELIAPHDGKNVLIVSHGGVLRALLAYLLGLSDEDI---LRLNLPNGSISVLELDEN 144 (153)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhCCCHHHH---HhcCCCCceEEEEEEeCC
Confidence 7888999998876 57899999999999999999998753322 246899999999999765
No 27
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.86 E-value=6.9e-21 Score=154.93 Aligned_cols=141 Identities=30% Similarity=0.333 Sum_probs=110.1
Q ss_pred EEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCCCC
Q 022779 37 ILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDG 116 (292)
Q Consensus 37 ~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~~~ 116 (292)
+|||||||++.++...... +..|.+||+.|++||+.+++.|..... .++.|||||+.||+|||++++..+.
T Consensus 1 ~i~liRHg~~~~~~~~~~~-------~~~d~~Lt~~G~~qa~~l~~~l~~~~~--~~~~v~sSp~~R~~~Ta~~~~~~~~ 71 (153)
T cd07040 1 VLYLVRHGEREPNAEGRFT-------GWGDGPLTEKGRQQARELGKALRERYI--KFDRIYSSPLKRAIQTAEIILEGLF 71 (153)
T ss_pred CEEEEeCCCCccccCCCcc-------CCCCCCcCHHHHHHHHHHHHHHHHhCC--CCCEEEECChHHHHHHHHHHHHHhc
Confidence 4899999999988776532 368999999999999999999987532 7899999999999999999986540
Q ss_pred CCCCCCCCCCCcccccccCCCCCeeecCchhhhcCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCCHHHHH
Q 022779 117 ESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVT 196 (292)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~~ 196 (292)
...++...+.
T Consensus 72 -------------------~~~~~~~~~~--------------------------------------------------- 81 (153)
T cd07040 72 -------------------EGLPVEVDPR--------------------------------------------------- 81 (153)
T ss_pred -------------------CCCCeEECHH---------------------------------------------------
Confidence 0011111100
Q ss_pred HHHHHHHHHHHhc---CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeC
Q 022779 197 ARGMEFMKWLWTR---QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQ 259 (292)
Q Consensus 197 ~R~~~~~~~l~~~---~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~ 259 (292)
.|+..++..+... ..++|+||||+++|+.++.++++.+.... ..+.+.+|++..+++...
T Consensus 82 ~r~~~~~~~~~~~~~~~~~~iliv~H~~~i~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~ 144 (153)
T cd07040 82 ARVLNALLELLARHLLDGKNVLIVSHGGTIRALLAALLGLSDEEI---LSLNLPNGSILVLELDEC 144 (153)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHhCcCHHHh---ccccCCCCceEEEEEcCC
Confidence 7888888888775 46899999999999999999998653322 235789999999998654
No 28
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.84 E-value=1.2e-19 Score=148.66 Aligned_cols=142 Identities=18% Similarity=0.146 Sum_probs=101.8
Q ss_pred eEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCCC
Q 022779 36 KILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD 115 (292)
Q Consensus 36 ~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~~ 115 (292)
|+|||||||++.++.. +..|.+||+.|++||+.+++.|...+. .++.|||||+.||+|||+.+.+.+
T Consensus 1 m~l~LvRHg~a~~~~~-----------~d~dr~Lt~~G~~qa~~~~~~l~~~~~--~~d~i~sSp~~Ra~qTa~~l~~~~ 67 (152)
T TIGR00249 1 MQLFIMRHGDAALDAA-----------SDSVRPLTTNGCDESRLVAQWLKGQGV--EIERILVSPFVRAEQTAEIVGDCL 67 (152)
T ss_pred CEEEEEeCCCcccccC-----------CCCCCCcCHHHHHHHHHHHHHHHhCCC--CCCEEEECCcHHHHHHHHHHHHHc
Confidence 4799999999987654 146889999999999999999987544 789999999999999999998765
Q ss_pred CCCCCCCCCCCCcccccccCCCCCeeecCchhhhcCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCCHHHH
Q 022779 116 GESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEV 195 (292)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~ 195 (292)
+ .. ..+...+ +. + | +++..+
T Consensus 68 ~------------------~~-~~~~~~~-------------~l------------------------~--p-~~~~~~- 87 (152)
T TIGR00249 68 N------------------LP-SSAEVLE-------------GL------------------------T--P-CGDIGL- 87 (152)
T ss_pred C------------------CC-cceEEcc-------------Cc------------------------C--C-CCCHHH-
Confidence 1 00 0111000 00 0 1 122222
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeCC
Q 022779 196 TARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQS 260 (292)
Q Consensus 196 ~~R~~~~~~~l~~~~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~ 260 (292)
+..+++.+.....++|+||+|+..+..++..+.+... ...+.+|++..++++..+
T Consensus 88 ---~~~~l~~~~~~~~~~vliVgH~P~i~~l~~~l~~~~~-------~~~~~~~~~~~l~~~~~~ 142 (152)
T TIGR00249 88 ---VSDYLEALTNEGVASVLLVSHLPLVGYLVAELCPGEN-------PIMFTTGAIASLLWDESK 142 (152)
T ss_pred ---HHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhCCCC-------CCcCcceeEEEEEEecCC
Confidence 3334444443356799999999999999999987522 136899999999997443
No 29
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.83 E-value=3.3e-19 Score=146.98 Aligned_cols=139 Identities=19% Similarity=0.199 Sum_probs=98.9
Q ss_pred eEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCCC
Q 022779 36 KILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD 115 (292)
Q Consensus 36 ~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~~ 115 (292)
|+|||||||++.++.. +..|.+||+.|++||+.++++|...+. .++.|||||+.||+|||+++++.+
T Consensus 1 m~l~lvRHg~a~~~~~-----------~d~~rpLt~~G~~qa~~~~~~l~~~~~--~~d~i~sSp~~Ra~qTa~~l~~~~ 67 (159)
T PRK10848 1 MQVFIMRHGDAALDAA-----------SDSVRPLTTCGCDESRLMANWLKGQKV--DIERVLVSPYLRAEQTLEVVGECL 67 (159)
T ss_pred CEEEEEeCCCCCCCCC-----------CCcCCCcCHHHHHHHHHHHHHHHhCCC--CCCEEEECCHHHHHHHHHHHHHHh
Confidence 4799999999987742 235789999999999999999987644 789999999999999999997655
Q ss_pred CCCCCCCCCCCCcccccccCCCCCeeecCchhhhcCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCCHHHH
Q 022779 116 GESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEV 195 (292)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~ 195 (292)
+ .. ..+...+ + .++. .+.
T Consensus 68 ~------------------~~-~~~~~~~---~------------------l~~~-------------------~~~--- 85 (159)
T PRK10848 68 N------------------LP-ASAEVLP---E------------------LTPC-------------------GDV--- 85 (159)
T ss_pred C------------------CC-CceEEcc---C------------------CCCC-------------------CCH---
Confidence 1 00 0111110 0 0010 000
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEE
Q 022779 196 TARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIV 257 (292)
Q Consensus 196 ~~R~~~~~~~l~~~~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~ 257 (292)
..+..+++.+...+.++|+||+|...+..+...+.+.... ..+.+|++..++++
T Consensus 86 -~~~~~~l~~~~~~~~~~vllVgH~P~l~~l~~~L~~~~~~-------~~~~t~~i~~l~~~ 139 (159)
T PRK10848 86 -GLVSAYLQALANEGVASVLVISHLPLVGYLVAELCPGETP-------PMFTTSAIACVTLD 139 (159)
T ss_pred -HHHHHHHHHHHhcCCCeEEEEeCcCcHHHHHHHHhCCCCC-------CCcCCceEEEEEec
Confidence 2334455555444567999999999999999998864321 13789999999997
No 30
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.81 E-value=6.1e-19 Score=153.98 Aligned_cols=179 Identities=20% Similarity=0.157 Sum_probs=129.7
Q ss_pred cceeEEEEEeCcCCccCCcCC-CCC------CcccC-----------------CcCCCCCCCHHHHHHHHHHHHHHHHcC
Q 022779 33 QHCKILHLVRHGQGVHNMEGN-NGP------EALLS-----------------QEFFDAHLSPLGWQQVGNLRKRVEASG 88 (292)
Q Consensus 33 ~~~~~i~lVRHGes~~n~~~~-~~~------~~~~~-----------------~~~~D~~LT~~G~~QA~~l~~~L~~~~ 88 (292)
...+.|++|||||+.++..+. |.. ++|.. .-..|+|||..|..||+.+|+.|.+.+
T Consensus 10 ~~~~~i~vmRHgERvD~if~~~W~~~~~~~~~~y~~~d~n~p~~l~qr~~~~~~y~~d~pit~~g~~~~~~~gr~l~~a~ 89 (272)
T KOG3734|consen 10 DVPRNIFVMRHGERVDNIFGKLWLKTCARPDGKYVPDDMNMPFRLPQRIRSPKGYPIDPPITVSGFIQCKLIGRELLNAG 89 (272)
T ss_pred CCCceEEEEEcccccccccchhhhhhhcCCCCCcCCCCccCCccccccccCcccCccCCCccchhHHHHHHHHHHHHhcC
Confidence 346789999999999977665 321 11110 012499999999999999999999887
Q ss_pred CCCCccEEEEcchhHHHHHHHHhcCCCCCCCCCCCCCCCcccccccCCCCCeeecCchhhhcCCCCCC----CCCChhHH
Q 022779 89 LTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCD----KRRSISEY 164 (292)
Q Consensus 89 ~~~~~~~I~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~~g~~~~~----~g~~~~~l 164 (292)
. .++.|||||..||+|||..+.+.++ ......+.++|.|-|.. .|..+ ...+..++
T Consensus 90 ~--~i~~ifcSPs~r~VqTa~~i~~~~g-----------------~e~~~~i~vePgL~e~~-~~~~~~~~p~~is~~el 149 (272)
T KOG3734|consen 90 I--AIDVIFCSPSLRCVQTAAKIKKGLG-----------------IEKKLKIRVEPGLFEPE-KWPKDGKFPFFISPDEL 149 (272)
T ss_pred C--CcceeecCCchhHHHHHHHHHHhhc-----------------hhcCeeEEecchhcchh-hhcccCCCCCcCCHHHH
Confidence 6 8999999999999999999998873 01235788899998861 11111 12234455
Q ss_pred HhhCCCcccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHhc-CCCEEEEEechHHHHHHHHHhhcCC
Q 022779 165 HSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTR-QEKEIAVVSHGIFLQQTLNALLNDC 234 (292)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~~~~l~~~-~~~~vliVsHg~~i~~ll~~~~~~~ 234 (292)
.......+.... +-....+.++||.+++..|...++..|+++ ++++||||+||..+..+.+.+.+..
T Consensus 150 ~~~~~~VD~~y~---P~~~~~~~~~es~e~~~~R~~~~~k~i~~k~~~~~lLIV~H~~sv~~~~~~l~~~~ 217 (272)
T KOG3734|consen 150 KFPGFPVDLNYD---PVYKETPRWGESLEDCNDRIQKVFKAIADKYPNENLLIVAHGSSVDTCSAQLQGLP 217 (272)
T ss_pred hccCCCcccccc---hhhhhcccccccHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHHhcCCC
Confidence 544433322111 001223667899999999999999999987 7788999999999999998887753
No 31
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only]
Probab=99.80 E-value=3.1e-19 Score=148.55 Aligned_cols=178 Identities=22% Similarity=0.278 Sum_probs=125.8
Q ss_pred ceeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcC
Q 022779 34 HCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFG 113 (292)
Q Consensus 34 ~~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~ 113 (292)
..++||||||||-.. .+ ..+ .||+.|++||+.++++|.+.++ +++.|+.|.|.||.+||.+|++
T Consensus 93 atRhI~LiRHgeY~~--~g-----------~~~-hLTelGReQAE~tGkRL~elgl--k~d~vv~StM~RA~ETadIIlk 156 (284)
T KOG4609|consen 93 ATRHIFLIRHGEYHV--DG-----------SLE-HLTELGREQAELTGKRLAELGL--KFDKVVASTMVRATETADIILK 156 (284)
T ss_pred hhceEEEEeccceec--cC-----------chh-hcchhhHHHHHHHhHHHHHcCC--chhhhhhhhhhhhHHHHHHHHH
Confidence 356899999999431 11 123 8999999999999999999988 9999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccccccCCCCCeeecCchhhhcCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCCHH
Q 022779 114 GDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFE 193 (292)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~~ 193 (292)
.+. +....+..+.|+|-- .++.+ |. .. .|.+...+ +.
T Consensus 157 ~l~-------------------d~lk~~s~~ll~EGa-P~ppd------------Pp--~k--------~wrp~~~q-y~ 193 (284)
T KOG4609|consen 157 HLP-------------------DDLKRVSCPLLREGA-PYPPD------------PP--VK--------HWRPLDPQ-YY 193 (284)
T ss_pred hCC-------------------CccceecccccccCC-CCCCC------------CC--cc--------cCCccChH-hh
Confidence 882 123555667777731 12111 10 11 12221111 11
Q ss_pred HHHHHHHHHHHHHHhc------CCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeCCCCC---C
Q 022779 194 EVTARGMEFMKWLWTR------QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRG---S 264 (292)
Q Consensus 194 ~~~~R~~~~~~~l~~~------~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~~~~---~ 264 (292)
.=-.|+...++.++.+ .+.-.|||+|++||+.+++..+..+. +.+++..+.||+|+-+.+...+-.. +
T Consensus 194 rdgaRIEaafRryfhRA~p~QeedSy~liV~HaNVIRY~icRALq~Pp---egWlR~nlnh~SiTWlti~PsG~vsvr~l 270 (284)
T KOG4609|consen 194 RDGARIEAAFRRYFHRASPSQEEDSYELIVCHANVIRYFICRALQFPP---EGWLRMNLNHCSITWLTISPSGHVSVRSL 270 (284)
T ss_pred hcchHHHHHHHHHHhhcCcccccccEEEEEeecchhhhhhhhhhcCCc---chhheecccCcceEEEEEccCCcEEEEec
Confidence 1136888888777643 34568999999999999998887643 3456789999999999998666433 3
Q ss_pred CCCCCCCCC
Q 022779 265 CYPGTISGE 273 (292)
Q Consensus 265 n~~~hl~~~ 273 (292)
.+.|++|.+
T Consensus 271 GdsGfmP~~ 279 (284)
T KOG4609|consen 271 GDSGFMPPN 279 (284)
T ss_pred cccCCCChh
Confidence 777887643
No 32
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.78 E-value=3.7e-18 Score=139.47 Aligned_cols=144 Identities=23% Similarity=0.258 Sum_probs=104.3
Q ss_pred eeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcCC
Q 022779 35 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 114 (292)
Q Consensus 35 ~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~~ 114 (292)
|++|||+|||++.+...+. ..+|.+||+.|+++++.+|+.|+..+. .+|.|+|||+.||+|||+.+.+.
T Consensus 1 m~~L~LmRHgkA~~~~~~~---------~D~dR~Lt~~G~~ea~~~a~~L~~~~~--~~D~VL~Spa~Ra~QTae~v~~~ 69 (163)
T COG2062 1 MMRLYLMRHGKAEWAAPGI---------ADFDRPLTERGRKEAELVAAWLAGQGV--EPDLVLVSPAVRARQTAEIVAEH 69 (163)
T ss_pred CceEEEeecccccccCCCC---------CCccCcCCHHHHHHHHHHHHHHHhcCC--CCCEEEeChhHHHHHHHHHHHHh
Confidence 6899999999999876642 247899999999999999999999876 89999999999999999999887
Q ss_pred CCCCCCCCCCCCCcccccccCCCCCeeecCchhhhcCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCCHHH
Q 022779 115 DGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEE 194 (292)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~ 194 (292)
++ ..... . ++ + ..|..+
T Consensus 70 ~~--------------------~~~~~-------~---~~---~--------l~p~~d---------------------- 86 (163)
T COG2062 70 LG--------------------EKKVE-------V---FE---E--------LLPNGD---------------------- 86 (163)
T ss_pred hC--------------------cccce-------e---cc---c--------cCCCCC----------------------
Confidence 62 00000 0 00 0 001000
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEeCC
Q 022779 195 VTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQS 260 (292)
Q Consensus 195 ~~~R~~~~~~~l~~~~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~ 260 (292)
..-+...++.+.+ .-.+++||+|-..+..+...+.+. ......|..++|.+++++...
T Consensus 87 -~~~~l~~l~~~~d-~v~~vllVgH~P~l~~l~~~L~~~------~~~~~~fptsgia~l~~~~~~ 144 (163)
T COG2062 87 -PGTVLDYLEALGD-GVGSVLLVGHNPLLEELALLLAGG------ARLPVKFPTSGIAVLEFDGKW 144 (163)
T ss_pred -HHHHHHHHHHhcc-cCceEEEECCCccHHHHHHHHccc------cccccCCCcccEEEEEecccc
Confidence 1112223333322 347899999999999999988775 122458899999999998653
No 33
>PRK06193 hypothetical protein; Provisional
Probab=99.76 E-value=7.6e-18 Score=143.48 Aligned_cols=142 Identities=19% Similarity=0.139 Sum_probs=99.8
Q ss_pred hcccc-cccceeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHH
Q 022779 26 AKHLY-SLQHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRT 104 (292)
Q Consensus 26 ~~~~~-~~~~~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra 104 (292)
+++++ ..+.-.+|||||||++.+|..+...+.. .....|.+||+.|++||+.+++.|...+. .++.|||||+.||
T Consensus 32 ~~~~~~~l~~~~~L~LvRHGet~~n~~~~~~gd~--d~~~~~rpLt~~G~~qA~~l~~~L~~~~~--~~d~V~sSpl~Ra 107 (206)
T PRK06193 32 DKTLLESLQKGGYVIYFRHAATDRSQADQDTSDM--DDCSTQRNLSEEGREQARAIGEAFRALAI--PVGKVISSPYCRA 107 (206)
T ss_pred chHHHHHHhcCCEEEEEeCccCCCCccCCccccc--ccCcCCCCCCHHHHHHHHHHHHHHHhcCC--CCCEEEECCcHHH
Confidence 45544 3446688999999999888766543200 00112579999999999999999987644 7899999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCCCCcccccccCCCCCeeecCchhhhcCCCCCCCCCChhHHHhhCCCcccccccccCCCCC
Q 022779 105 LQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLW 184 (292)
Q Consensus 105 ~qTA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~ 184 (292)
+|||++++.... .+ .. +..+ + .
T Consensus 108 ~qTA~il~~~~~---------------------~~----~~----l~~~---------------~--------------~ 129 (206)
T PRK06193 108 WETAQLAFGRHE---------------------KE----IR----LNFL---------------N--------------S 129 (206)
T ss_pred HHHHHHHhcccc---------------------cC----cc----cccc---------------c--------------c
Confidence 999999864320 00 00 0000 0 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEechHHHHHHHHHh
Q 022779 185 KADAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNAL 230 (292)
Q Consensus 185 ~~~~gEs~~~~~~R~~~~~~~l~~~~~~~vliVsHg~~i~~ll~~~ 230 (292)
..+..|+...+..|+..+++.+. ...++|+||+|+..|+.++..+
T Consensus 130 ~~~~~~~~~~y~~~l~~~I~~l~-~~~~~vLlVgHnp~i~~l~g~~ 174 (206)
T PRK06193 130 EPVPAERNALLKAGLRPLLTTPP-DPGTNTVLVGHDDNLEAATGIY 174 (206)
T ss_pred cCCChhhHHHHHHHHHHHHhhCC-CCCCeEEEEeCchHHHHHhCCC
Confidence 01134777888899999888885 4567899999999999887643
No 34
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism]
Probab=99.75 E-value=2.1e-17 Score=152.18 Aligned_cols=180 Identities=24% Similarity=0.229 Sum_probs=139.4
Q ss_pred ceeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCcc-EEEEcchhHHHHHHHHhc
Q 022779 34 HCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKID-LVITSPLLRTLQTAVGVF 112 (292)
Q Consensus 34 ~~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~-~I~sSpl~Ra~qTA~~i~ 112 (292)
..++|||.||||+.+|..++.. .|++|++.|.+-|+.+++++.... ..+ .|++|++.||+|||+.+-
T Consensus 238 ~pR~i~l~r~geS~~n~~grig---------gds~ls~~g~~ya~~l~~f~~~~~---~~dl~vwts~~~rti~ta~~l~ 305 (438)
T KOG0234|consen 238 TPRTIYLTRHGESEFNVEGRIG---------GDSPLSERGSQYAKSLIKFVEEQS---SSDLDVWTSQRKRTIQTAEGLK 305 (438)
T ss_pred CCceEEEEecCCCccccccccC---------CcccccHHHHHHHHHHHHHHhhhc---ccCceeccchHHHHhhhHhhcC
Confidence 4678999999999999998864 499999999999999999998864 344 899999999999999542
Q ss_pred CCCCCCCCCCCCCCCcccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCC
Q 022779 113 GGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREP 191 (292)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs 191 (292)
... .+..+..|+|. .|..+ |+++.++...||.. +..-. .....|+-++|||
T Consensus 306 ~~~-----------------------~~~~~~~Ldei~ag~~~---g~t~eeI~~~~p~e-~~~r~-~dky~yry~~gES 357 (438)
T KOG0234|consen 306 LDY-----------------------SVEQWKALDEIDAGVCE---GLTYEEIETNYPEE-FALRD-KDKYRYRYPGGES 357 (438)
T ss_pred cch-----------------------hhhhHhhcCcccccccc---cccHHHHHHhCchh-hhhcc-CCcceeecCCCCC
Confidence 111 13456678888 77765 99999999999965 32221 2234577889999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEe
Q 022779 192 FEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVD 258 (292)
Q Consensus 192 ~~~~~~R~~~~~~~l~~~~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~ 258 (292)
+.++..|+..++..+-.+ .+|+|+||..+|++++.++++....... .+.+.-..|.+++...
T Consensus 358 y~D~v~RlePvImElEr~--~~Vlvi~Hqavircll~Yf~~~~~~e~p---~l~~plhtv~~l~~~~ 419 (438)
T KOG0234|consen 358 YSDLVQRLEPVIMELERQ--ENVLVITHQAVIRCLLAYFLNCSPVELP---YLTVPLHTVIKLTPDA 419 (438)
T ss_pred HHHHHHhhhhHhHhhhhc--ccEEEEecHHHHHHHHHHHhcCCHhhcc---cccccceeEEEEeecc
Confidence 999999999999888543 3499999999999999999997643322 2355666666666544
No 35
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.74 E-value=7.8e-17 Score=136.16 Aligned_cols=134 Identities=16% Similarity=0.099 Sum_probs=89.6
Q ss_pred ceeEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCCCCCccEEEEcchhHHHHHHHHhcC
Q 022779 34 HCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFG 113 (292)
Q Consensus 34 ~~~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~I~sSpl~Ra~qTA~~i~~ 113 (292)
..++||||||||+.....+.. ...+.|||+.|++||+.+++.|++.. ..+.|||||+.||+|||++++.
T Consensus 53 ~~~~L~LiRHGet~~~~~~~~--------~sD~RpLTerG~~qA~~lg~~L~~~~---~~d~I~sSpa~Ra~qTAe~ia~ 121 (201)
T PRK15416 53 QHPVVVLFRHAERCDRSDNQC--------LSDKTGITVKGTQDARELGKAFSADI---PDYDLYSSNTVRTIQSATWFSA 121 (201)
T ss_pred CCCEEEEEeCccccCccCCCC--------CCCCCCCCHHHHHHHHHHHHHHhCCC---CCCEEEECCCHHHHHHHHHHhc
Confidence 456799999999832111110 11226999999999999999998642 3479999999999999999965
Q ss_pred CCCCCCCCCCCCCCcccccccCCCCCeeecCchhhhcCCCCCCCCCChhHHHhhCCCcccccccccCCCCCCCCCCCCHH
Q 022779 114 GDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFE 193 (292)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~E~~g~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~~ 193 (292)
.. ++..++.|+|.-
T Consensus 122 ~~-----------------------~v~~~~~Lye~~------------------------------------------- 135 (201)
T PRK15416 122 GK-----------------------KLTVDKRLSDCG------------------------------------------- 135 (201)
T ss_pred CC-----------------------CcEecHHHhhcC-------------------------------------------
Confidence 32 445555555530
Q ss_pred HHHHHHHHHHHHHHh-cCCCEEEEEechHHHHHHHHHhhcCCCCCCCccCCCCccCceEEEEEEEe
Q 022779 194 EVTARGMEFMKWLWT-RQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVD 258 (292)
Q Consensus 194 ~~~~R~~~~~~~l~~-~~~~~vliVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~ 258 (292)
.+...++..++. .++++|+||+|+..+..+.....+. .+.+..+..+.++.
T Consensus 136 ---~~~~~~i~~~i~~~~~~tVLIVGHnp~i~~La~~~~~~-----------~~~~~~~~~l~~~~ 187 (201)
T PRK15416 136 ---NGIYSAIKDLQRKSPDKNIVIFTHNHCLTYIAKDKRGV-----------KFKPDYLDALVMHV 187 (201)
T ss_pred ---chhHHHHHHHHHhCCCCEEEEEeCchhHHHHHHHhcCC-----------CCCCCceEEEEEEc
Confidence 111122233332 3558999999999999998865543 34555666665553
No 36
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=97.83 E-value=2.5e-05 Score=68.47 Aligned_cols=62 Identities=27% Similarity=0.287 Sum_probs=50.2
Q ss_pred eEEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHHcCC--------CCCccEEEEcchhHHHHH
Q 022779 36 KILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGL--------TQKIDLVITSPLLRTLQT 107 (292)
Q Consensus 36 ~~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~--------~~~~~~I~sSpl~Ra~qT 107 (292)
+.++++|||++.. ..||+.|++|+..+|++|+..-. ....-.|++|+..||+||
T Consensus 4 ~v~~~~RHg~r~p------------------~~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~S 65 (242)
T cd07061 4 QVQVLSRHGDRYP------------------GELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQS 65 (242)
T ss_pred EEEEEEecCCCCc------------------hhhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHHH
Confidence 4578999999742 38999999999999999976311 112337899999999999
Q ss_pred HHHhcCCC
Q 022779 108 AVGVFGGD 115 (292)
Q Consensus 108 A~~i~~~~ 115 (292)
|+.++.++
T Consensus 66 a~~~~~gl 73 (242)
T cd07061 66 AQAFLAGL 73 (242)
T ss_pred HHHHHHhc
Confidence 99999887
No 37
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=96.85 E-value=0.0027 Score=57.88 Aligned_cols=48 Identities=29% Similarity=0.296 Sum_probs=39.1
Q ss_pred CCCHHHHHHHHHHHHHHHHcC--CCC-----CccEEEEcchhHHHHHHHHhcCCC
Q 022779 68 HLSPLGWQQVGNLRKRVEASG--LTQ-----KIDLVITSPLLRTLQTAVGVFGGD 115 (292)
Q Consensus 68 ~LT~~G~~QA~~l~~~L~~~~--~~~-----~~~~I~sSpl~Ra~qTA~~i~~~~ 115 (292)
.||+.|.+|...+|++|+..- +.. .--.|++|...||++||..++.++
T Consensus 62 ~LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl 116 (347)
T PF00328_consen 62 QLTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGL 116 (347)
T ss_dssp SBTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred cccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHH
Confidence 499999999999999998642 111 223688999999999999999877
No 38
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism]
Probab=96.16 E-value=0.021 Score=54.24 Aligned_cols=78 Identities=19% Similarity=0.189 Sum_probs=51.9
Q ss_pred eEEEEEeCcCCcc-CC-c--CCCCCCcccCCcCCCCCCCHHHHHHHHHHHHHHHH---cCC---CCCc----cEEEEcch
Q 022779 36 KILHLVRHGQGVH-NM-E--GNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEA---SGL---TQKI----DLVITSPL 101 (292)
Q Consensus 36 ~~i~lVRHGes~~-n~-~--~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~---~~~---~~~~----~~I~sSpl 101 (292)
..-.+-|||...- +. . .......++..++- .||+.|..|+..+|+.|++ ... ...+ -.|.||+.
T Consensus 36 fv~~i~RHGdRaP~~~~yp~dp~~~~~~~~~G~G--qLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd~ 113 (411)
T KOG3720|consen 36 FVQVIFRHGDRAPVDTPYPLDPFKEEDFWPRGWG--QLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTDV 113 (411)
T ss_pred EEEEEeecCCCCcccCCCCCCcccccccCCCCcc--hhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecCCc
Confidence 3456689998763 11 1 11111112223333 7999999999999999998 321 1112 15779999
Q ss_pred hHHHHHHHHhcCCC
Q 022779 102 LRTLQTAVGVFGGD 115 (292)
Q Consensus 102 ~Ra~qTA~~i~~~~ 115 (292)
.||+.||+.++.++
T Consensus 114 nRtl~SAqs~laGl 127 (411)
T KOG3720|consen 114 NRTLMSAQSVLAGL 127 (411)
T ss_pred cHHHHHHHHHHHhh
Confidence 99999999998877
No 39
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=96.16 E-value=0.023 Score=53.97 Aligned_cols=80 Identities=18% Similarity=0.155 Sum_probs=50.3
Q ss_pred eEEEEEeCcCCccCCcCCCCCCcccCCcC-----CCCCCCHHHHHHHHHHHHHHHH----cCCCC-----C--ccEEEEc
Q 022779 36 KILHLVRHGQGVHNMEGNNGPEALLSQEF-----FDAHLSPLGWQQVGNLRKRVEA----SGLTQ-----K--IDLVITS 99 (292)
Q Consensus 36 ~~i~lVRHGes~~n~~~~~~~~~~~~~~~-----~D~~LT~~G~~QA~~l~~~L~~----~~~~~-----~--~~~I~sS 99 (292)
+-|+|.|||-+.--......-.++....| ..-.||++|..+-..+|+++++ .++.+ . .-.|+++
T Consensus 33 ~vvilsRHg~R~P~~~~~~~l~~~t~~~Wp~w~~~~G~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~a~ 112 (413)
T PRK10173 33 QVLMMSRHNLRAPLANNGSVLEQSTPNAWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAYAN 112 (413)
T ss_pred EEEEEeecccCCCCCCcchhhhhcCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEEeC
Confidence 55999999976433221100001111112 2336999999998888886654 23321 1 2367899
Q ss_pred chhHHHHHHHHhcCCC
Q 022779 100 PLLRTLQTAVGVFGGD 115 (292)
Q Consensus 100 pl~Ra~qTA~~i~~~~ 115 (292)
+..|+++||+.++.++
T Consensus 113 ~~~RT~~Sa~afl~Gl 128 (413)
T PRK10173 113 SLQRTVATAQFFITGA 128 (413)
T ss_pred CchHHHHHHHHHHHhc
Confidence 9999999999987766
No 40
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=95.16 E-value=0.084 Score=50.30 Aligned_cols=79 Identities=18% Similarity=0.113 Sum_probs=49.6
Q ss_pred eEEEEEeCcCCccCCcCCCCCCcccCCcCC-----CCCCCHHHHHHHHHHHHHHHHcC----CCCC-----cc--EEEEc
Q 022779 36 KILHLVRHGQGVHNMEGNNGPEALLSQEFF-----DAHLSPLGWQQVGNLRKRVEASG----LTQK-----ID--LVITS 99 (292)
Q Consensus 36 ~~i~lVRHGes~~n~~~~~~~~~~~~~~~~-----D~~LT~~G~~QA~~l~~~L~~~~----~~~~-----~~--~I~sS 99 (292)
+-+++-|||-+.--.... .-+.+....|. .-.||++|..|...+|+++++.- +.+. .+ .|+++
T Consensus 36 ~Vvil~RHG~RaP~~~~~-~~~~~t~~~w~~W~~~~GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~ 114 (436)
T PRK10172 36 SVVIVSRHGVRAPTKATQ-LMQDVTPDAWPQWPVKLGWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIAD 114 (436)
T ss_pred EEEEEeeCCCCCCCCCCc-ccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeC
Confidence 447899999865332111 00011111222 23699999999999998776532 2111 22 56788
Q ss_pred chhHHHHHHHHhcCCC
Q 022779 100 PLLRTLQTAVGVFGGD 115 (292)
Q Consensus 100 pl~Ra~qTA~~i~~~~ 115 (292)
+..||+.||+.++.++
T Consensus 115 ~~~RTi~SAqafl~Gl 130 (436)
T PRK10172 115 VDQRTRKTGEAFLAGL 130 (436)
T ss_pred CchHHHHHHHHHHHhc
Confidence 8899999999988776
No 41
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]
Probab=91.09 E-value=0.19 Score=50.25 Aligned_cols=48 Identities=19% Similarity=0.049 Sum_probs=39.0
Q ss_pred CCCHHHHHHHHHHHHHHHHcCC-------------CCCccEEEEcchhHHHHHHHHhcCCC
Q 022779 68 HLSPLGWQQVGNLRKRVEASGL-------------TQKIDLVITSPLLRTLQTAVGVFGGD 115 (292)
Q Consensus 68 ~LT~~G~~QA~~l~~~L~~~~~-------------~~~~~~I~sSpl~Ra~qTA~~i~~~~ 115 (292)
.||+.|+.||+.+|+.+...-- ...--.||+|.-.|.+.||+++++++
T Consensus 511 elT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgL 571 (1018)
T KOG1057|consen 511 ELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGL 571 (1018)
T ss_pred EecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHH
Confidence 6999999999999999986411 01122699999999999999999877
No 42
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=64.68 E-value=19 Score=32.83 Aligned_cols=42 Identities=19% Similarity=0.140 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEechHHHHHHHHHhhcCC
Q 022779 193 EEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDC 234 (292)
Q Consensus 193 ~~~~~R~~~~~~~l~~~~~~~vliVsHg~~i~~ll~~~~~~~ 234 (292)
..+..|+..++..+.++++++|+||+||.--..++.++-...
T Consensus 174 ~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~ 215 (310)
T PF12048_consen 174 ERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKP 215 (310)
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCC
Confidence 346677777777777778888999999998888888776654
No 43
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=46.13 E-value=21 Score=29.89 Aligned_cols=31 Identities=26% Similarity=0.143 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHHHHHhc-CCCEEEEEechH
Q 022779 191 PFEEVTARGMEFMKWLWTR-QEKEIAVVSHGI 221 (292)
Q Consensus 191 s~~~~~~R~~~~~~~l~~~-~~~~vliVsHg~ 221 (292)
+..++..|+..|++.|.+. |+..||+|+|-.
T Consensus 72 ~~~~~~~~~~~fv~~iR~~hP~tPIllv~~~~ 103 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIREAHPDTPILLVSPIP 103 (178)
T ss_dssp CTTTHHHHHHHHHHHHHTT-SSS-EEEEE---
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 4557899999999999987 678899999643
No 44
>KOG3672 consensus Histidine acid phosphatase [General function prediction only]
Probab=38.16 E-value=45 Score=31.37 Aligned_cols=46 Identities=24% Similarity=0.118 Sum_probs=35.3
Q ss_pred CCCHHHHHHHHHHHHHHHHcCC----CCCc-----c--EEEEcchhHHHHHHHHhcC
Q 022779 68 HLSPLGWQQVGNLRKRVEASGL----TQKI-----D--LVITSPLLRTLQTAVGVFG 113 (292)
Q Consensus 68 ~LT~~G~~QA~~l~~~L~~~~~----~~~~-----~--~I~sSpl~Ra~qTA~~i~~ 113 (292)
.||..|..|--.+|+.+.+... +..+ + .|+++-+.|+.|+|.++.-
T Consensus 168 ~LT~~G~~QhL~~G~~~r~~Y~k~~lk~~pN~~sv~~lyv~TT~y~RT~QSaLA~lf 224 (487)
T KOG3672|consen 168 MLTAEGALQHLRLGKYFRHRYEKTKLKADPNQRSVADLYVVTTKYNRTVQSALAFLF 224 (487)
T ss_pred ceeHHhHHHHHhhhHHHHHHHhhccccCCccccccceeEEEeccccHHHHHHHHHHH
Confidence 4899999999999998876422 1111 1 4899999999999999853
No 45
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=34.13 E-value=64 Score=28.46 Aligned_cols=28 Identities=25% Similarity=0.376 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEechH
Q 022779 193 EEVTARGMEFMKWLWTRQEKEIAVVSHGI 221 (292)
Q Consensus 193 ~~~~~R~~~~~~~l~~~~~~~vliVsHg~ 221 (292)
+.|++++..-++.++++. .+|++|||..
T Consensus 180 ~~F~~K~~~rl~e~~~~~-~tiv~VSHd~ 207 (249)
T COG1134 180 AAFQEKCLERLNELVEKN-KTIVLVSHDL 207 (249)
T ss_pred HHHHHHHHHHHHHHHHcC-CEEEEEECCH
Confidence 456788888888887655 8999999984
No 46
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=33.92 E-value=1.4e+02 Score=22.75 Aligned_cols=40 Identities=20% Similarity=0.198 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHhc-CCCEEEEEec--hHHHHHHHHHhhcC
Q 022779 194 EVTARGMEFMKWLWTR-QEKEIAVVSH--GIFLQQTLNALLND 233 (292)
Q Consensus 194 ~~~~R~~~~~~~l~~~-~~~~vliVsH--g~~i~~ll~~~~~~ 233 (292)
.+..++.+.+..+.++ +..+|+|++| ||.+..++...+..
T Consensus 45 ~~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~ 87 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLAS 87 (140)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhh
Confidence 3445666666666654 5689999999 56777766655543
No 47
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=32.73 E-value=64 Score=32.33 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=28.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcC-CCEEEEEechH
Q 022779 188 AREPFEEVTARGMEFMKWLWTRQ-EKEIAVVSHGI 221 (292)
Q Consensus 188 ~gEs~~~~~~R~~~~~~~l~~~~-~~~vliVsHg~ 221 (292)
..|...+++.|++..++.+.+.. ++.|+||+|+-
T Consensus 188 ~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSM 222 (642)
T PLN02517 188 NTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSM 222 (642)
T ss_pred chhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 45667889999999999987764 68999999973
No 48
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=29.07 E-value=91 Score=27.53 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEEechHHHHHHHH
Q 022779 194 EVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLN 228 (292)
Q Consensus 194 ~~~~R~~~~~~~l~~~~~~~vliVsHg~~i~~ll~ 228 (292)
.-+..++..+..|.++...+|++|||.--=..+++
T Consensus 164 lTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~Ls 198 (248)
T COG1116 164 LTREELQDELLRLWEETRKTVLLVTHDVDEAVYLA 198 (248)
T ss_pred HHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhh
Confidence 34555777777888778899999999955554443
No 49
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=27.55 E-value=1.3e+02 Score=26.17 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEEechHHHHHHHHH
Q 022779 194 EVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNA 229 (292)
Q Consensus 194 ~~~~R~~~~~~~l~~~~~~~vliVsHg~~i~~ll~~ 229 (292)
+-...+...+..+.+..+.+||+|||...+......
T Consensus 176 ~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr 211 (226)
T COG1136 176 KTAKEVLELLRELNKERGKTIIMVTHDPELAKYADR 211 (226)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCE
Confidence 345556667777766567899999999988875543
No 50
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=27.28 E-value=55 Score=24.80 Aligned_cols=18 Identities=28% Similarity=0.438 Sum_probs=14.7
Q ss_pred EEEEEechHHHHHHHHHh
Q 022779 213 EIAVVSHGIFLQQTLNAL 230 (292)
Q Consensus 213 ~vliVsHg~~i~~ll~~~ 230 (292)
.|+|+|||.+-..+...+
T Consensus 1 giii~sHG~~A~g~~~~~ 18 (116)
T PF03610_consen 1 GIIIASHGSLAEGLLESA 18 (116)
T ss_dssp EEEEEEETTHHHHHHHHH
T ss_pred CEEEEECcHHHHHHHHHH
Confidence 489999999888887654
No 51
>PRK00865 glutamate racemase; Provisional
Probab=27.11 E-value=3.4e+02 Score=23.88 Aligned_cols=58 Identities=17% Similarity=0.264 Sum_probs=43.9
Q ss_pred hhHHHhhCCCcccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEechH
Q 022779 161 ISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGI 221 (292)
Q Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~~~~l~~~~~~~vliVsHg~ 221 (292)
..++.+.+|..++-++- |....|.+..|.+++..|+.+.++.+.+.+-+-|+|-+...
T Consensus 21 l~~i~~~lp~~~~iY~~---D~~~~PYG~ks~~~i~~~~~~~~~~L~~~g~d~iVIaCNTa 78 (261)
T PRK00865 21 LREIRRLLPDEHIIYVG---DTARFPYGEKSEEEIRERTLEIVEFLLEYGVKMLVIACNTA 78 (261)
T ss_pred HHHHHHHCCCCCEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEeCchH
Confidence 55677888988776664 33345556679999999999999999887677777777764
No 52
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=26.48 E-value=75 Score=24.29 Aligned_cols=19 Identities=21% Similarity=0.202 Sum_probs=15.6
Q ss_pred EEEEEechHHHHHHHHHhh
Q 022779 213 EIAVVSHGIFLQQTLNALL 231 (292)
Q Consensus 213 ~vliVsHg~~i~~ll~~~~ 231 (292)
.|+|+|||.+-..+...+-
T Consensus 3 ~ili~sHG~~A~gl~~s~~ 21 (116)
T TIGR00824 3 AIIISGHGQAAIALLKSAE 21 (116)
T ss_pred EEEEEecHHHHHHHHHHHH
Confidence 5899999999888877543
No 53
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=25.84 E-value=83 Score=29.60 Aligned_cols=30 Identities=10% Similarity=0.285 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEEech
Q 022779 191 PFEEVTARGMEFMKWLWTRQEKEIAVVSHG 220 (292)
Q Consensus 191 s~~~~~~R~~~~~~~l~~~~~~~vliVsHg 220 (292)
...++..+++..++.+.+..++.|+||+|+
T Consensus 98 ~~~~~~~~lk~~ie~~~~~~~~kv~li~HS 127 (389)
T PF02450_consen 98 ERDEYFTKLKQLIEEAYKKNGKKVVLIAHS 127 (389)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEEeC
Confidence 455788888888888877678899999996
No 54
>PRK04946 hypothetical protein; Provisional
Probab=25.06 E-value=2.5e+02 Score=23.46 Aligned_cols=45 Identities=16% Similarity=0.006 Sum_probs=36.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCCCEEEEEech---HHHHHHHHHhhcC
Q 022779 188 AREPFEEVTARGMEFMKWLWTRQEKEIAVVSHG---IFLQQTLNALLND 233 (292)
Q Consensus 188 ~gEs~~~~~~R~~~~~~~l~~~~~~~vliVsHg---~~i~~ll~~~~~~ 233 (292)
.|-+..+....+..|+...... +-..+.|-|| ++++..+..++..
T Consensus 101 hG~~~eeA~~~L~~fl~~a~~~-g~r~v~IIHGkG~gvLk~~V~~wL~q 148 (181)
T PRK04946 101 HGLTQLQAKQELGALIAACRKE-HVFCACVMHGHGKHILKQQTPLWLAQ 148 (181)
T ss_pred CCCCHHHHHHHHHHHHHHHHHc-CCCEEEEEcCCCHhHHHHHHHHHHcC
Confidence 4678899999999999887653 4456677798 8999999988875
No 55
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=24.96 E-value=78 Score=24.26 Aligned_cols=18 Identities=33% Similarity=0.493 Sum_probs=14.4
Q ss_pred EEEEEechHHHHHHHHHh
Q 022779 213 EIAVVSHGIFLQQTLNAL 230 (292)
Q Consensus 213 ~vliVsHg~~i~~ll~~~ 230 (292)
.++|||||.+-..+...+
T Consensus 2 ~ili~sHG~~A~gi~~~~ 19 (122)
T cd00006 2 GIIIATHGGFASGLLNSA 19 (122)
T ss_pred eEEEEcCHHHHHHHHHHH
Confidence 589999998888876654
No 56
>PF13479 AAA_24: AAA domain
Probab=24.63 E-value=1.2e+02 Score=25.69 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=29.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCCEEEEEechHHHHH
Q 022779 189 REPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQ 225 (292)
Q Consensus 189 gEs~~~~~~R~~~~~~~l~~~~~~~vliVsHg~~i~~ 225 (292)
+--|..+..++..+++.++...+.+||+++|...-..
T Consensus 105 ~~~yg~~~~~~~~~i~~l~~~~~~~VI~tah~~~~~~ 141 (213)
T PF13479_consen 105 GKGYGELQQEFMRFIDKLLNALGKNVIFTAHAKEEED 141 (213)
T ss_pred cchHHHHHHHHHHHHHHHHHHCCCcEEEEEEEEEEEc
Confidence 4567788888999999887767889999999865554
No 57
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=24.01 E-value=89 Score=28.09 Aligned_cols=29 Identities=24% Similarity=0.201 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEechHHHHH
Q 022779 196 TARGMEFMKWLWTRQEKEIAVVSHGIFLQQ 225 (292)
Q Consensus 196 ~~R~~~~~~~l~~~~~~~vliVsHg~~i~~ 225 (292)
..++...+..+.+ .+..|+|||||++--.
T Consensus 33 l~~l~~~i~~l~~-~g~~vilVssGAv~~G 61 (284)
T cd04256 33 LASIVEQVSELQS-QGREVILVTSGAVAFG 61 (284)
T ss_pred HHHHHHHHHHHHH-CCCEEEEEeeCcHHhC
Confidence 3334444444433 4678999999987544
No 58
>PF04270 Strep_his_triad: Streptococcal histidine triad protein ; InterPro: IPR006270 This entry represents a repeated sequence region that includes a His-X-X-His-X-His (histidine triad) motif, which is found in family of Streptococcal proteins. Members of the family are suggested to cleave human complement component 3, and family member PhpA has been shown in vaccine studies to be a protective antigen in mice []. ; PDB: 2CS7_C.
Probab=23.66 E-value=49 Score=21.82 Aligned_cols=30 Identities=20% Similarity=0.162 Sum_probs=19.1
Q ss_pred EEEEEeCcCCccCCcCCCCCCcccCCcCCCCCCCHHHHHHHHHH
Q 022779 37 ILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNL 80 (292)
Q Consensus 37 ~i~lVRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l 80 (292)
.=|+||||.-.+-. +-..||+..+++|++.
T Consensus 20 ~gy~vpHgdH~HyI--------------~k~dLs~~E~~aA~~~ 49 (53)
T PF04270_consen 20 DGYVVPHGDHFHYI--------------PKSDLSASELKAAQAY 49 (53)
T ss_dssp SEEEEEETTEEEEE--------------EGGGS-HHHHHHHHHH
T ss_pred CeEEeeCCCcccCC--------------chhhCCHHHHHHHHHH
Confidence 35889999643321 2337899888887764
No 59
>PRK14484 phosphotransferase mannnose-specific family component IIA; Provisional
Probab=23.38 E-value=1.1e+02 Score=23.90 Aligned_cols=18 Identities=22% Similarity=0.344 Sum_probs=13.0
Q ss_pred EEEEEech-HHHHHHHHHh
Q 022779 213 EIAVVSHG-IFLQQTLNAL 230 (292)
Q Consensus 213 ~vliVsHg-~~i~~ll~~~ 230 (292)
-|+||||| .+-..++..+
T Consensus 3 GIVlVSHs~~lA~gl~~~~ 21 (124)
T PRK14484 3 GIVIVSHSKKIAEGVKDLI 21 (124)
T ss_pred eEEEEeCcHHHHHHHHHHH
Confidence 48999999 6666665544
No 60
>COG2893 ManX Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]
Probab=22.19 E-value=90 Score=25.05 Aligned_cols=19 Identities=37% Similarity=0.572 Sum_probs=16.0
Q ss_pred EEEEEechHHHHHHHHHhh
Q 022779 213 EIAVVSHGIFLQQTLNALL 231 (292)
Q Consensus 213 ~vliVsHg~~i~~ll~~~~ 231 (292)
.|+|+|||.+-..++..+-
T Consensus 3 ~iii~tHG~~A~~l~~s~e 21 (143)
T COG2893 3 GIIIATHGRFAEGLLNSLE 21 (143)
T ss_pred eEEEEeCHHHHHHHHHHHH
Confidence 5899999999999887653
No 61
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=21.79 E-value=76 Score=28.32 Aligned_cols=38 Identities=21% Similarity=0.212 Sum_probs=26.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCCCEEEEEechHHHHHH
Q 022779 188 AREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQT 226 (292)
Q Consensus 188 ~gEs~~~~~~R~~~~~~~l~~~~~~~vliVsHg~~i~~l 226 (292)
...|+.+...++++.++...+.. ..|++.+|||.|..-
T Consensus 190 ~~~sl~~a~~~~~~i~~aa~~v~-~dii~l~hGGPI~~p 227 (268)
T PF09370_consen 190 TALSLEEAAERIQEIFDAARAVN-PDIIVLCHGGPIATP 227 (268)
T ss_dssp -S--HHHHHHHHHHHHHHHHCC--TT-EEEEECTTB-SH
T ss_pred ccCCHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCCCCCH
Confidence 35789999999999998886543 457999999998764
No 62
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=21.18 E-value=1.6e+02 Score=25.26 Aligned_cols=33 Identities=12% Similarity=0.214 Sum_probs=20.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHhc------CCCEEEEEech
Q 022779 188 AREPFEEVTARGMEFMKWLWTR------QEKEIAVVSHG 220 (292)
Q Consensus 188 ~gEs~~~~~~R~~~~~~~l~~~------~~~~vliVsHg 220 (292)
.|+.+.+..+-+...++.|.+. +.+.|+||+|+
T Consensus 55 ~g~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHS 93 (225)
T PF07819_consen 55 HGRTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHS 93 (225)
T ss_pred ccccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEc
Confidence 4555555555555555555432 56889999995
No 63
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=20.55 E-value=2.5e+02 Score=23.74 Aligned_cols=42 Identities=19% Similarity=0.203 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHHHHHhc-CCCEEEEEec--hHHHHHHHHHhhc
Q 022779 191 PFEEVTARGMEFMKWLWTR-QEKEIAVVSH--GIFLQQTLNALLN 232 (292)
Q Consensus 191 s~~~~~~R~~~~~~~l~~~-~~~~vliVsH--g~~i~~ll~~~~~ 232 (292)
.+..++..+...+..+.++ ++..|+|++| ||.+..++...+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 106 AYKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHH
Confidence 3444555555555555544 6788999999 4666666555443
No 64
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=20.42 E-value=1.1e+02 Score=26.90 Aligned_cols=35 Identities=14% Similarity=0.018 Sum_probs=24.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCCEEEEEechHHHHH
Q 022779 189 REPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQ 225 (292)
Q Consensus 189 gEs~~~~~~R~~~~~~~l~~~~~~~vliVsHg~~i~~ 225 (292)
.+|+.+..+|+.+.+..+ .+++..|+|+|+++...
T Consensus 126 i~s~~eA~~~ive~~~~~--~~~~~~VliaH~~~~G~ 160 (238)
T cd07397 126 VISLEESAQRIIAAAKKA--PPDLPLILLAHNGPSGL 160 (238)
T ss_pred CCCHHHHHHHHHHHhhhc--CCCCCeEEEeCcCCcCC
Confidence 457777777777666421 35677899999998655
No 65
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=20.36 E-value=1.3e+02 Score=26.12 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEechHHHHHHHH
Q 022779 193 EEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLN 228 (292)
Q Consensus 193 ~~~~~R~~~~~~~l~~~~~~~vliVsHg~~i~~ll~ 228 (292)
.-.++|++..+-.+....++.+++|||+-=-..++.
T Consensus 165 a~tRe~mQelLldlw~~tgk~~lliTH~ieEAlfla 200 (259)
T COG4525 165 ALTREQMQELLLDLWQETGKQVLLITHDIEEALFLA 200 (259)
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhh
Confidence 335677888888888888999999999955555443
Done!