Query 022783
Match_columns 292
No_of_seqs 234 out of 579
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 11:03:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022783.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022783hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.3 6.7E-12 2.3E-16 99.6 9.6 100 185-287 14-116 (126)
2 3gyz_A Chaperone protein IPGC; 99.2 1.5E-11 5E-16 102.2 8.3 98 184-284 36-136 (151)
3 4gcn_A Protein STI-1; structur 99.2 2.3E-11 7.9E-16 96.2 8.6 64 218-284 11-74 (127)
4 4gco_A Protein STI-1; structur 99.2 4.6E-11 1.6E-15 94.7 10.0 69 216-287 14-82 (126)
5 4ga2_A E3 SUMO-protein ligase 99.2 6.1E-11 2.1E-15 96.1 10.2 95 190-287 3-100 (150)
6 3rkv_A Putative peptidylprolyl 99.2 9.5E-11 3.2E-15 94.2 10.1 69 218-289 66-134 (162)
7 2hr2_A Hypothetical protein; a 99.2 4E-11 1.4E-15 103.1 8.3 97 186-285 13-135 (159)
8 4gcn_A Protein STI-1; structur 99.2 3.7E-11 1.3E-15 95.0 6.5 100 184-283 8-114 (127)
9 2hr2_A Hypothetical protein; a 99.2 7.4E-11 2.5E-15 101.5 8.5 75 213-287 9-99 (159)
10 3upv_A Heat shock protein STI1 99.1 1.9E-10 6.6E-15 88.2 8.2 93 187-282 7-102 (126)
11 3sz7_A HSC70 cochaperone (SGT) 99.1 3E-10 1E-14 91.5 8.8 100 184-286 11-113 (164)
12 3gyz_A Chaperone protein IPGC; 99.1 3.8E-10 1.3E-14 93.7 9.4 81 204-287 24-105 (151)
13 2vgx_A Chaperone SYCD; alterna 99.1 3.8E-10 1.3E-14 91.5 8.8 98 184-284 21-121 (148)
14 3vtx_A MAMA; tetratricopeptide 99.1 2.9E-10 9.8E-15 92.0 7.7 78 204-284 95-173 (184)
15 2xcb_A PCRH, regulatory protei 99.1 3.9E-10 1.4E-14 89.4 8.2 97 185-284 19-118 (142)
16 3upv_A Heat shock protein STI1 99.0 1.2E-09 4.1E-14 83.8 9.9 69 215-286 4-72 (126)
17 2l6j_A TPR repeat-containing p 99.0 7.9E-10 2.7E-14 81.5 8.5 67 216-285 5-71 (111)
18 3k9i_A BH0479 protein; putativ 99.0 2.8E-09 9.5E-14 81.8 9.6 67 216-285 28-94 (117)
19 3ma5_A Tetratricopeptide repea 99.0 2.1E-09 7.1E-14 81.3 8.3 65 216-283 8-72 (100)
20 2xev_A YBGF; tetratricopeptide 99.0 1.6E-09 5.5E-14 82.2 7.6 69 217-285 41-109 (129)
21 1hxi_A PEX5, peroxisome target 98.9 7.8E-10 2.7E-14 86.8 5.7 93 185-285 25-118 (121)
22 4gyw_A UDP-N-acetylglucosamine 98.9 1.4E-09 4.6E-14 111.7 8.6 98 186-286 45-145 (723)
23 3q49_B STIP1 homology and U bo 98.9 2.9E-09 1E-13 81.5 8.5 94 188-284 13-109 (137)
24 3rkv_A Putative peptidylprolyl 98.9 2.4E-09 8.3E-14 85.9 8.2 73 215-287 11-98 (162)
25 4ga2_A E3 SUMO-protein ligase 98.9 1.7E-09 6E-14 87.4 7.2 100 184-286 31-134 (150)
26 1p5q_A FKBP52, FK506-binding p 98.9 4.4E-09 1.5E-13 96.3 10.0 100 184-286 147-264 (336)
27 3sz7_A HSC70 cochaperone (SGT) 98.9 6.4E-09 2.2E-13 83.6 9.7 69 215-286 11-79 (164)
28 4gyw_A UDP-N-acetylglucosamine 98.9 2.6E-09 9E-14 109.6 9.2 99 185-286 10-111 (723)
29 2kc7_A BFR218_protein; tetratr 98.9 4.9E-09 1.7E-13 77.0 8.2 66 219-287 4-70 (99)
30 2vgx_A Chaperone SYCD; alterna 98.9 6.9E-09 2.3E-13 84.1 9.8 80 205-287 10-90 (148)
31 4i17_A Hypothetical protein; T 98.9 5.6E-09 1.9E-13 87.4 9.3 98 186-286 9-110 (228)
32 2lni_A Stress-induced-phosphop 98.9 3.8E-09 1.3E-13 79.3 7.4 99 184-285 16-117 (133)
33 2kck_A TPR repeat; tetratricop 98.9 3.8E-09 1.3E-13 76.7 6.9 69 216-285 41-110 (112)
34 2dba_A Smooth muscle cell asso 98.9 8.3E-09 2.8E-13 79.0 9.0 94 185-286 36-133 (148)
35 1a17_A Serine/threonine protei 98.9 1.1E-08 3.7E-13 79.8 9.8 100 184-286 13-115 (166)
36 1hh8_A P67PHOX, NCF-2, neutrop 98.9 7.1E-09 2.4E-13 85.1 9.1 100 185-284 38-153 (213)
37 1elw_A TPR1-domain of HOP; HOP 98.9 7.3E-09 2.5E-13 75.6 8.0 68 216-286 39-106 (118)
38 3urz_A Uncharacterized protein 98.9 8.7E-09 3E-13 87.0 9.6 64 221-287 60-123 (208)
39 2fbn_A 70 kDa peptidylprolyl i 98.9 1.1E-08 3.9E-13 84.6 10.1 100 184-286 38-156 (198)
40 1hxi_A PEX5, peroxisome target 98.9 1.1E-08 3.9E-13 80.1 9.3 68 217-287 19-86 (121)
41 2xcb_A PCRH, regulatory protei 98.8 1.5E-08 5.1E-13 80.2 10.0 69 216-287 19-87 (142)
42 1ihg_A Cyclophilin 40; ppiase 98.8 1.5E-08 5.1E-13 95.0 11.6 99 184-285 223-340 (370)
43 1kt0_A FKBP51, 51 kDa FK506-bi 98.8 5.5E-09 1.9E-13 99.9 8.9 99 184-285 268-384 (457)
44 1zu2_A Mitochondrial import re 98.8 3.5E-09 1.2E-13 91.0 6.7 87 196-285 14-124 (158)
45 2h6f_A Protein farnesyltransfe 98.8 1.9E-09 6.7E-14 102.0 5.5 99 185-286 132-234 (382)
46 1na3_A Designed protein CTPR2; 98.8 2.4E-08 8.3E-13 71.1 9.9 68 216-286 10-77 (91)
47 2vyi_A SGTA protein; chaperone 98.8 2.4E-08 8.1E-13 73.9 10.0 100 184-286 12-114 (131)
48 3q49_B STIP1 homology and U bo 98.8 2E-08 6.9E-13 76.8 9.5 69 215-286 9-77 (137)
49 2pl2_A Hypothetical conserved 98.8 1.9E-08 6.5E-13 85.4 10.1 97 186-286 75-185 (217)
50 1hh8_A P67PHOX, NCF-2, neutrop 98.8 1E-08 3.4E-13 84.2 8.0 94 187-284 9-103 (213)
51 3vtx_A MAMA; tetratricopeptide 98.8 1.5E-08 5.2E-13 81.8 8.8 97 187-286 8-107 (184)
52 2dba_A Smooth muscle cell asso 98.8 3.2E-08 1.1E-12 75.7 9.9 71 216-286 29-99 (148)
53 1elr_A TPR2A-domain of HOP; HO 98.8 1.1E-08 3.7E-13 76.0 6.9 68 216-283 39-110 (131)
54 2pl2_A Hypothetical conserved 98.8 8.3E-09 2.8E-13 87.7 7.0 94 186-282 41-148 (217)
55 2kat_A Uncharacterized protein 98.8 2.9E-08 1E-12 75.2 8.9 65 216-283 20-84 (115)
56 2xev_A YBGF; tetratricopeptide 98.8 3.5E-08 1.2E-12 74.7 9.0 68 218-285 5-72 (129)
57 1na0_A Designed protein CTPR3; 98.8 3.7E-08 1.3E-12 72.3 8.7 68 216-286 44-111 (125)
58 2h6f_A Protein farnesyltransfe 98.7 8.7E-09 3E-13 97.5 6.1 98 187-287 100-201 (382)
59 2c2l_A CHIP, carboxy terminus 98.7 2.1E-08 7.1E-13 89.2 7.9 95 188-285 8-105 (281)
60 2if4_A ATFKBP42; FKBP-like, al 98.7 8.5E-09 2.9E-13 94.6 5.5 66 217-285 232-297 (338)
61 2lni_A Stress-induced-phosphop 98.7 7.6E-08 2.6E-12 72.0 9.6 68 216-286 17-84 (133)
62 1wao_1 Serine/threonine protei 98.7 4.4E-08 1.5E-12 94.6 9.9 99 184-285 6-107 (477)
63 1elw_A TPR1-domain of HOP; HOP 98.7 8.7E-08 3E-12 69.8 9.1 68 216-286 5-72 (118)
64 4i17_A Hypothetical protein; T 98.7 3.3E-08 1.1E-12 82.6 7.7 64 220-283 81-148 (228)
65 1xnf_A Lipoprotein NLPI; TPR, 98.7 6.4E-08 2.2E-12 81.3 9.4 100 184-286 43-145 (275)
66 2kck_A TPR repeat; tetratricop 98.7 5.1E-08 1.8E-12 70.6 7.5 64 218-284 9-72 (112)
67 2fbn_A 70 kDa peptidylprolyl i 98.7 1.7E-07 5.9E-12 77.4 11.3 71 216-286 39-122 (198)
68 3qky_A Outer membrane assembly 98.7 4.1E-08 1.4E-12 84.2 7.4 70 216-285 53-130 (261)
69 3uq3_A Heat shock protein STI1 98.6 3.9E-07 1.3E-11 75.3 12.3 65 218-285 142-206 (258)
70 2e2e_A Formate-dependent nitri 98.6 1E-07 3.5E-12 76.8 8.3 95 188-285 48-148 (177)
71 2qg1_A Multiple PDZ domain pro 98.6 1.2E-07 4.2E-12 71.8 8.1 81 84-168 3-88 (92)
72 3uq3_A Heat shock protein STI1 98.6 1.2E-07 4.3E-12 78.3 8.7 95 185-282 140-237 (258)
73 2vyi_A SGTA protein; chaperone 98.6 3E-07 1E-11 67.9 9.9 68 216-286 13-80 (131)
74 1elr_A TPR2A-domain of HOP; HO 98.6 2.2E-07 7.4E-12 68.9 9.0 66 216-284 5-70 (131)
75 1p5q_A FKBP52, FK506-binding p 98.6 1.4E-07 4.8E-12 86.3 9.5 71 216-286 148-230 (336)
76 1a17_A Serine/threonine protei 98.6 2.9E-07 9.8E-12 71.7 10.0 69 215-286 13-81 (166)
77 1xnf_A Lipoprotein NLPI; TPR, 98.6 4E-07 1.4E-11 76.4 11.2 68 216-286 44-111 (275)
78 1kt0_A FKBP51, 51 kDa FK506-bi 98.6 1.3E-07 4.4E-12 90.4 9.2 71 216-286 269-351 (457)
79 3qky_A Outer membrane assembly 98.6 2.4E-07 8.4E-12 79.3 10.0 70 215-284 15-84 (261)
80 2vwr_A Ligand of NUMB protein 98.6 2.2E-07 7.4E-12 71.0 8.6 82 84-169 2-89 (95)
81 1qqe_A Vesicular transport pro 98.6 1.3E-07 4.4E-12 83.8 8.5 100 185-284 118-231 (292)
82 3urz_A Uncharacterized protein 98.6 1.7E-07 5.7E-12 79.0 8.7 69 216-287 5-89 (208)
83 4eqf_A PEX5-related protein; a 98.6 9E-08 3.1E-12 84.9 7.3 95 187-284 216-313 (365)
84 1qqe_A Vesicular transport pro 98.6 1.2E-07 4.2E-12 83.9 8.1 102 184-285 77-191 (292)
85 4eqf_A PEX5-related protein; a 98.6 2.5E-07 8.7E-12 82.0 10.1 92 191-285 184-280 (365)
86 4abn_A Tetratricopeptide repea 98.6 1.1E-07 3.6E-12 91.1 7.7 102 185-286 171-292 (474)
87 2v5f_A Prolyl 4-hydroxylase su 98.5 2.1E-07 7.1E-12 71.8 7.9 71 215-285 5-79 (104)
88 2yhc_A BAMD, UPF0169 lipoprote 98.5 2.5E-07 8.4E-12 78.6 9.0 70 216-285 5-74 (225)
89 2fo7_A Synthetic consensus TPR 98.5 3.6E-07 1.2E-11 67.2 8.8 63 218-283 72-134 (136)
90 3as5_A MAMA; tetratricopeptide 98.5 2.4E-07 8.4E-12 72.2 8.1 66 217-285 112-177 (186)
91 3u3w_A Transcriptional activat 98.5 1.3E-07 4.5E-12 83.2 7.3 97 185-281 156-266 (293)
92 2fo7_A Synthetic consensus TPR 98.5 4E-07 1.4E-11 67.0 8.7 68 216-286 36-103 (136)
93 2qkv_A Inactivation-NO-after-p 98.5 3.6E-07 1.2E-11 70.4 8.6 84 81-169 4-91 (96)
94 1n7e_A AMPA receptor interacti 98.5 3.5E-07 1.2E-11 70.2 8.5 81 85-169 5-90 (97)
95 2c2l_A CHIP, carboxy terminus 98.5 2.4E-07 8.1E-12 82.4 8.6 69 216-287 5-73 (281)
96 2vsy_A XCC0866; transferase, g 98.5 2.2E-07 7.4E-12 89.5 9.0 96 187-285 26-124 (568)
97 2qfc_A PLCR protein; TPR, HTH, 98.5 1E-07 3.6E-12 83.9 6.2 98 184-281 155-266 (293)
98 3ro3_A PINS homolog, G-protein 98.5 5.4E-07 1.9E-11 68.3 9.4 65 217-281 51-118 (164)
99 2gw1_A Mitochondrial precursor 98.5 3.3E-07 1.1E-11 83.7 9.5 100 185-287 7-108 (514)
100 1fch_A Peroxisomal targeting s 98.5 2.1E-07 7.1E-12 81.7 7.5 95 188-285 221-318 (368)
101 2yhc_A BAMD, UPF0169 lipoprote 98.5 7E-07 2.4E-11 75.8 10.6 69 219-287 151-219 (225)
102 2ejy_A 55 kDa erythrocyte memb 98.5 3.1E-07 1.1E-11 72.2 7.8 78 87-168 14-95 (97)
103 3u4t_A TPR repeat-containing p 98.5 2.9E-07 9.8E-12 77.6 7.9 96 187-286 77-176 (272)
104 3edt_B KLC 2, kinesin light ch 98.5 5.6E-07 1.9E-11 74.9 9.6 66 216-281 86-156 (283)
105 3as5_A MAMA; tetratricopeptide 98.5 5E-07 1.7E-11 70.4 8.8 67 216-285 77-143 (186)
106 2vq2_A PILW, putative fimbrial 98.5 6E-07 2E-11 72.6 9.5 64 219-283 80-144 (225)
107 2yt7_A Amyloid beta A4 precurs 98.5 1.1E-06 3.8E-11 68.2 10.6 79 87-169 11-99 (101)
108 3edt_B KLC 2, kinesin light ch 98.5 5.6E-07 1.9E-11 74.9 9.4 98 184-281 85-198 (283)
109 3ro3_A PINS homolog, G-protein 98.5 7.4E-07 2.5E-11 67.6 9.2 97 185-281 50-158 (164)
110 2jil_A GRIP1 protein, glutamat 98.5 4.9E-07 1.7E-11 69.1 8.2 80 85-170 3-93 (97)
111 1wha_A KIAA0147 protein, scrib 98.5 1.1E-06 3.6E-11 68.5 10.0 83 83-169 5-98 (105)
112 1ouv_A Conserved hypothetical 98.5 2.8E-07 9.5E-12 79.1 7.1 67 214-285 181-255 (273)
113 1na0_A Designed protein CTPR3; 98.5 1.1E-06 3.7E-11 64.3 9.3 68 216-286 10-77 (125)
114 2iwn_A Multiple PDZ domain pro 98.5 6.6E-07 2.3E-11 67.8 8.3 81 84-168 3-92 (97)
115 2la8_A Inactivation-NO-after-p 98.4 9.2E-07 3.1E-11 70.0 9.5 80 85-169 2-85 (106)
116 2opg_A Multiple PDZ domain pro 98.4 9.8E-07 3.3E-11 67.5 9.3 84 85-172 4-93 (98)
117 3ieg_A DNAJ homolog subfamily 98.4 9.1E-07 3.1E-11 76.2 10.2 66 218-286 275-340 (359)
118 1fch_A Peroxisomal targeting s 98.4 1.3E-06 4.5E-11 76.6 11.2 94 189-286 187-285 (368)
119 1i16_A Interleukin 16, LCF; cy 98.4 1.7E-06 5.9E-11 70.4 11.1 84 82-169 26-118 (130)
120 3hym_B Cell division cycle pro 98.4 2.7E-07 9.1E-12 79.1 6.5 68 216-286 237-304 (330)
121 2gw1_A Mitochondrial precursor 98.4 6.7E-07 2.3E-11 81.7 9.6 69 214-286 5-73 (514)
122 3fp2_A TPR repeat-containing p 98.4 3E-07 1E-11 84.9 7.2 95 185-283 26-123 (537)
123 2qfc_A PLCR protein; TPR, HTH, 98.4 7.8E-07 2.7E-11 78.2 9.6 66 217-282 157-226 (293)
124 1w3b_A UDP-N-acetylglucosamine 98.4 5.8E-07 2E-11 80.6 8.8 65 218-285 240-304 (388)
125 2q7f_A YRRB protein; TPR, prot 98.4 8.3E-07 2.8E-11 73.1 9.1 98 186-286 59-159 (243)
126 3i4w_A Disks large homolog 4; 98.4 8.1E-07 2.8E-11 68.6 8.4 83 82-168 8-94 (104)
127 3b76_A E3 ubiquitin-protein li 98.4 9E-07 3.1E-11 71.5 9.0 86 79-168 18-112 (118)
128 3u4t_A TPR repeat-containing p 98.4 5.2E-07 1.8E-11 76.0 7.9 62 219-283 78-139 (272)
129 2q7f_A YRRB protein; TPR, prot 98.4 9.5E-07 3.2E-11 72.7 9.3 95 189-286 96-193 (243)
130 2pzi_A Probable serine/threoni 98.4 7.2E-08 2.5E-12 96.8 3.0 96 185-284 434-532 (681)
131 3cbz_A Dishevelled-2; PDZ doma 98.4 8.5E-07 2.9E-11 69.9 8.6 82 85-170 5-97 (108)
132 1m5z_A GRIP, AMPA receptor int 98.4 1.2E-06 4E-11 66.2 9.0 81 83-168 4-90 (91)
133 3ulq_A Response regulator aspa 98.4 9.4E-07 3.2E-11 79.9 10.0 96 184-282 184-294 (383)
134 1q7x_A PDZ2B domain of PTP-BAS 98.4 1.1E-06 3.7E-11 68.7 8.9 84 83-170 7-103 (108)
135 1w3b_A UDP-N-acetylglucosamine 98.4 6.1E-07 2.1E-11 80.4 8.4 66 217-285 307-372 (388)
136 4abn_A Tetratricopeptide repea 98.4 2.8E-07 9.6E-12 88.1 6.6 97 186-286 104-213 (474)
137 1kwa_A Hcask/LIN-2 protein; PD 98.4 4.5E-07 1.5E-11 69.0 6.4 72 93-170 13-86 (88)
138 1ihg_A Cyclophilin 40; ppiase 98.4 6.7E-07 2.3E-11 83.7 8.8 68 216-286 224-307 (370)
139 2l6j_A TPR repeat-containing p 98.4 4.9E-08 1.7E-12 71.8 0.8 91 187-277 7-103 (111)
140 3k9i_A BH0479 protein; putativ 98.4 2.7E-07 9.3E-12 70.5 5.1 60 227-286 2-61 (117)
141 1wf8_A Neurabin-I; PDZ domain, 98.4 7.1E-07 2.4E-11 69.7 7.6 85 82-170 6-101 (107)
142 2if4_A ATFKBP42; FKBP-like, al 98.4 4.2E-07 1.4E-11 83.3 6.9 71 216-286 180-264 (338)
143 1uhp_A Hypothetical protein KI 98.4 1.8E-06 6.3E-11 67.4 9.6 85 83-171 6-103 (107)
144 2i1n_A Discs, large homolog 3; 98.4 1.6E-06 5.5E-11 66.9 9.2 84 84-171 3-96 (102)
145 2dmz_A INAD-like protein; PDZ 98.4 1.5E-06 5E-11 70.1 9.3 85 81-171 11-108 (129)
146 2ho1_A Type 4 fimbrial biogene 98.4 1.5E-06 5.2E-11 72.5 9.7 62 219-283 109-172 (252)
147 2r4h_A Membrane-associated gua 98.4 1.3E-06 4.3E-11 69.2 8.7 86 79-168 18-108 (112)
148 3cv0_A Peroxisome targeting si 98.4 8E-07 2.8E-11 76.0 8.1 94 188-284 176-272 (327)
149 1ouv_A Conserved hypothetical 98.4 1.6E-06 5.4E-11 74.3 9.7 64 214-282 73-144 (273)
150 3hym_B Cell division cycle pro 98.4 1.8E-06 6.1E-11 73.9 9.9 91 189-282 130-223 (330)
151 2jre_A C60-1 PDZ domain peptid 98.4 1.4E-06 4.9E-11 67.9 8.5 85 81-169 8-104 (108)
152 2pzi_A Probable serine/threoni 98.4 2.3E-07 7.8E-12 93.1 5.0 96 188-286 402-501 (681)
153 3gge_A PDZ domain-containing p 98.4 1.3E-06 4.5E-11 69.4 8.3 81 85-169 5-90 (95)
154 1wi2_A Riken cDNA 2700099C19; 98.4 2.1E-06 7.1E-11 66.9 9.3 83 83-171 13-101 (104)
155 3ulq_A Response regulator aspa 98.4 1E-06 3.4E-11 79.7 8.5 98 184-281 143-253 (383)
156 2vq2_A PILW, putative fimbrial 98.4 1.3E-06 4.3E-11 70.7 8.3 65 216-283 114-178 (225)
157 2dlu_A INAD-like protein; PDZ 98.3 2.5E-06 8.7E-11 66.9 9.6 82 85-170 15-99 (111)
158 2fcf_A Multiple PDZ domain pro 98.3 2.1E-06 7.2E-11 66.2 8.9 79 85-169 4-99 (103)
159 1d5g_A Human phosphatase HPTP1 98.3 2.4E-06 8.2E-11 65.1 9.1 81 85-169 5-93 (96)
160 2vsy_A XCC0866; transferase, g 98.3 1.1E-06 3.8E-11 84.5 8.9 97 186-285 59-161 (568)
161 2awx_A Synapse associated prot 98.3 1.9E-06 6.6E-11 67.1 8.6 82 86-171 4-95 (105)
162 3mkr_A Coatomer subunit epsilo 98.3 8.7E-07 3E-11 79.4 7.6 63 219-284 204-267 (291)
163 1v62_A KIAA1719 protein; struc 98.3 1.2E-06 4.1E-11 70.0 7.4 81 86-170 16-103 (117)
164 1ueq_A Membrane associated gua 98.3 1.9E-06 6.7E-11 69.2 8.7 85 82-170 16-107 (123)
165 2pa1_A PDZ and LIM domain prot 98.3 1.7E-06 5.8E-11 64.9 7.7 75 87-168 4-84 (87)
166 2y4t_A DNAJ homolog subfamily 98.3 1.6E-06 5.5E-11 78.4 8.9 65 218-285 298-362 (450)
167 1qav_A Alpha-1 syntrophin (res 98.3 1.6E-06 5.4E-11 65.5 7.5 79 85-167 4-88 (90)
168 1va8_A Maguk P55 subfamily mem 98.3 2.4E-06 8.2E-11 67.7 8.9 79 86-169 26-108 (113)
169 3gw4_A Uncharacterized protein 98.3 3.5E-06 1.2E-10 67.8 10.0 64 218-281 69-136 (203)
170 3nf1_A KLC 1, kinesin light ch 98.3 2E-06 7E-11 72.9 8.9 66 216-281 112-182 (311)
171 2koj_A Partitioning defective 98.3 3.9E-06 1.3E-10 65.6 9.7 86 83-172 9-104 (111)
172 2he4_A Na(+)/H(+) exchange reg 98.3 2.9E-06 1E-10 64.0 8.6 78 87-171 6-89 (90)
173 2ifu_A Gamma-SNAP; membrane fu 98.3 1.7E-06 5.9E-11 77.0 8.6 63 218-281 119-184 (307)
174 3ieg_A DNAJ homolog subfamily 98.3 3.7E-06 1.3E-10 72.4 10.3 68 216-286 155-222 (359)
175 2r5s_A Uncharacterized protein 98.3 2.8E-06 9.6E-11 69.1 9.1 77 203-280 95-172 (176)
176 2byg_A Channel associated prot 98.3 2.6E-06 8.9E-11 68.2 8.7 82 83-168 22-113 (117)
177 2d92_A INAD-like protein; PDZ 98.3 2.6E-06 8.8E-11 66.9 8.5 81 86-170 16-106 (108)
178 2ehr_A INAD-like protein; PDZ 98.3 6.4E-06 2.2E-10 65.3 10.9 83 85-171 15-112 (117)
179 2jik_A Synaptojanin-2 binding 98.3 3.6E-06 1.2E-10 64.8 9.2 81 85-169 7-97 (101)
180 3u3w_A Transcriptional activat 98.3 2.4E-06 8.4E-11 75.0 9.3 65 218-282 158-226 (293)
181 2e2e_A Formate-dependent nitri 98.3 2.3E-06 7.9E-11 68.8 8.4 69 216-287 45-116 (177)
182 1um1_A KIAA1849 protein, RSGI 98.3 3.7E-06 1.3E-10 65.8 9.4 80 85-168 8-95 (110)
183 2dm8_A INAD-like protein; PDZ 98.3 1.6E-06 5.4E-11 68.5 7.2 85 85-173 17-107 (116)
184 2o2t_A Multiple PDZ domain pro 98.3 9.5E-07 3.2E-11 70.0 5.8 83 84-169 19-110 (117)
185 2ho1_A Type 4 fimbrial biogene 98.3 4.6E-06 1.6E-10 69.6 10.3 67 217-286 177-243 (252)
186 3qww_A SET and MYND domain-con 98.3 3.5E-06 1.2E-10 81.7 10.9 64 218-281 343-411 (433)
187 2djt_A Unnamed protein product 98.3 1.9E-06 6.4E-11 66.7 7.3 82 83-168 9-97 (104)
188 1wg6_A Hypothetical protein (r 98.3 2.4E-06 8.4E-11 69.3 8.1 82 85-170 25-123 (127)
189 2ifu_A Gamma-SNAP; membrane fu 98.3 1.8E-06 6.1E-11 76.9 7.9 98 184-283 116-225 (307)
190 2fe5_A Presynaptic protein SAP 98.3 4E-06 1.4E-10 63.5 8.7 80 85-168 3-92 (94)
191 2d90_A PDZ domain containing p 98.3 3.8E-06 1.3E-10 64.9 8.7 81 86-171 7-91 (102)
192 1uep_A Membrane associated gua 98.3 1.8E-06 6.3E-11 67.1 6.9 83 83-169 7-96 (103)
193 3q15_A PSP28, response regulat 98.3 3.1E-06 1.1E-10 76.7 9.4 97 183-282 181-291 (378)
194 3nf1_A KLC 1, kinesin light ch 98.3 3.2E-06 1.1E-10 71.7 9.0 66 216-281 70-140 (311)
195 1rgw_A ZAsp protein; PDZ, cyph 98.3 2E-06 6.9E-11 64.0 6.8 78 86-168 2-83 (85)
196 2db5_A INAD-like protein; PDZ 98.3 2.6E-06 8.9E-11 68.7 8.0 85 85-172 25-118 (128)
197 2e7k_A Maguk P55 subfamily mem 98.2 1.4E-06 4.9E-11 66.6 6.0 77 87-169 8-88 (91)
198 2fne_A Multiple PDZ domain pro 98.2 2.1E-06 7.3E-11 68.9 7.3 80 85-168 25-112 (117)
199 2daz_A INAD-like protein; PDZ 98.2 3.5E-06 1.2E-10 67.6 8.6 83 84-170 24-112 (124)
200 4g1t_A Interferon-induced prot 98.2 3.6E-06 1.2E-10 77.0 9.4 63 219-281 55-123 (472)
201 3cv0_A Peroxisome targeting si 98.2 8.3E-06 2.9E-10 69.6 11.2 90 194-286 148-240 (327)
202 3axa_A Afadin, nectin-3, prote 98.2 4.4E-06 1.5E-10 65.0 8.6 86 82-171 8-100 (106)
203 2g5m_B Neurabin-2; spinophilin 98.2 2.4E-06 8.1E-11 67.2 7.1 84 84-171 3-97 (113)
204 2xpi_A Anaphase-promoting comp 98.2 3.2E-06 1.1E-10 79.6 9.2 67 217-286 518-584 (597)
205 2y4t_A DNAJ homolog subfamily 98.2 2.4E-06 8.2E-11 77.3 7.9 93 186-286 35-128 (450)
206 2vz5_A TAX1-binding protein 3; 98.2 4.1E-06 1.4E-10 69.3 8.6 86 80-170 18-125 (139)
207 3gw4_A Uncharacterized protein 98.2 2.9E-06 9.9E-11 68.3 7.5 99 184-282 66-177 (203)
208 1x5q_A LAP4 protein; PDZ domai 98.2 8E-06 2.7E-10 63.9 9.7 82 82-168 12-104 (110)
209 1ihj_A INAD; intermolecular di 98.2 3.4E-06 1.2E-10 64.5 7.4 78 87-168 7-96 (98)
210 2eno_A Synaptojanin-2-binding 98.2 6.4E-06 2.2E-10 65.7 9.2 86 81-170 13-108 (120)
211 1mfg_A ERB-B2 interacting prot 98.2 8.5E-06 2.9E-10 62.0 9.5 79 85-169 3-93 (95)
212 3egg_C Spinophilin; PP1, serin 98.2 3.5E-06 1.2E-10 72.4 8.2 81 83-167 78-169 (170)
213 2q9v_A Membrane-associated gua 98.2 3.8E-06 1.3E-10 63.2 7.4 80 85-168 2-88 (90)
214 1tp5_A Presynaptic density pro 98.2 4.2E-06 1.4E-10 66.4 7.9 86 81-170 10-99 (119)
215 2eeh_A PDZ domain-containing p 98.2 6.1E-06 2.1E-10 63.6 8.6 81 86-172 11-97 (100)
216 2w4f_A Protein LAP4; structura 98.2 6.9E-06 2.4E-10 62.5 8.7 80 84-168 2-92 (97)
217 1qau_A Neuronal nitric oxide s 98.2 6.6E-06 2.2E-10 64.4 8.8 81 85-171 1-89 (112)
218 2i04_A Membrane-associated gua 98.2 7.3E-06 2.5E-10 61.0 8.4 77 87-167 2-85 (85)
219 2kom_A Partitioning defective 98.2 7.1E-06 2.4E-10 65.9 8.8 82 83-168 28-119 (121)
220 1whd_A RGS3, regulator of G-pr 98.2 2.6E-06 8.8E-11 66.0 6.0 85 80-171 10-97 (100)
221 3rjv_A Putative SEL1 repeat pr 98.2 5.5E-06 1.9E-10 70.2 8.4 65 216-284 126-200 (212)
222 3q15_A PSP28, response regulat 98.2 4.3E-06 1.5E-10 75.7 8.2 98 184-281 141-251 (378)
223 2uzc_A Human pdlim5, PDZ and L 98.2 5.8E-06 2E-10 62.0 7.5 78 86-168 4-85 (88)
224 1nf3_C PAR-6B; semi-CRIB motif 98.2 4E-06 1.4E-10 67.9 7.1 79 86-168 30-124 (128)
225 3qou_A Protein YBBN; thioredox 98.2 8.4E-06 2.9E-10 72.4 9.8 82 204-285 139-252 (287)
226 3fp2_A TPR repeat-containing p 98.2 3.7E-06 1.3E-10 77.6 7.8 63 219-284 314-376 (537)
227 1g9o_A NHE-RF; PDZ domain, com 98.2 6.7E-06 2.3E-10 62.0 7.9 73 93-170 14-87 (91)
228 3rjv_A Putative SEL1 repeat pr 98.2 5.1E-06 1.8E-10 70.4 8.0 95 185-281 51-158 (212)
229 1n7t_A 99-MER peptide of densi 98.1 6.7E-06 2.3E-10 63.6 8.0 83 81-169 7-101 (103)
230 4g1t_A Interferon-induced prot 98.1 8.7E-06 3E-10 74.4 10.0 70 218-287 337-407 (472)
231 3n71_A Histone lysine methyltr 98.1 9.8E-06 3.4E-10 79.7 10.9 98 184-281 316-422 (490)
232 2r5s_A Uncharacterized protein 98.1 8.5E-07 2.9E-11 72.2 2.8 28 219-246 44-71 (176)
233 2ond_A Cleavage stimulation fa 98.1 1.2E-05 4.3E-10 71.2 10.4 94 190-285 70-167 (308)
234 2edp_A Fragment, shroom family 98.1 4E-06 1.4E-10 64.9 6.2 84 82-170 8-95 (100)
235 3l4f_D SH3 and multiple ankyri 98.1 1.3E-05 4.5E-10 65.6 9.6 81 87-172 29-127 (132)
236 2iwo_A Multiple PDZ domain pro 98.1 5.6E-06 1.9E-10 66.7 7.2 84 83-170 22-114 (120)
237 1wao_1 Serine/threonine protei 98.1 8.2E-07 2.8E-11 85.7 2.7 66 218-286 9-74 (477)
238 1wh1_A KIAA1095 protein; PDZ d 98.1 7.2E-06 2.5E-10 65.9 7.8 73 94-172 33-110 (124)
239 2q3g_A PDZ and LIM domain prot 98.1 1E-05 3.4E-10 60.9 7.9 80 85-169 3-86 (89)
240 2iwq_A Multiple PDZ domain pro 98.1 1.1E-05 3.6E-10 65.4 8.5 79 85-169 24-119 (123)
241 1uit_A Human discs large 5 pro 98.1 1E-05 3.5E-10 64.1 8.2 81 88-173 22-105 (117)
242 2pkt_A PDZ and LIM domain prot 98.1 9.8E-06 3.4E-10 61.2 7.7 73 90-169 10-86 (91)
243 1klx_A Cysteine rich protein B 98.1 1.5E-05 5.2E-10 63.9 9.3 76 204-284 46-129 (138)
244 3hpk_A Protein interacting wit 98.1 1.4E-05 4.9E-10 64.0 9.1 82 85-170 19-106 (125)
245 1wfv_A Membrane associated gua 98.1 2.2E-06 7.4E-11 66.0 4.1 85 83-171 9-98 (103)
246 3o46_A Maguk P55 subfamily mem 98.1 6.8E-06 2.3E-10 62.4 6.8 73 93-169 15-88 (93)
247 1um7_A Synapse-associated prot 98.1 5.3E-06 1.8E-10 64.8 6.3 83 83-169 13-99 (113)
248 3ro2_A PINS homolog, G-protein 98.1 7E-06 2.4E-10 69.3 7.6 63 219-281 267-332 (338)
249 1na3_A Designed protein CTPR2; 98.1 5.3E-06 1.8E-10 58.7 5.7 79 185-266 10-91 (91)
250 2h2b_A Tight junction protein 98.1 2.4E-05 8.1E-10 60.8 9.9 82 82-169 4-97 (107)
251 1wf7_A Enigma homologue protei 98.1 4.8E-06 1.6E-10 64.6 5.7 82 85-171 5-90 (103)
252 3mkr_A Coatomer subunit epsilo 98.1 1.5E-05 5.1E-10 71.3 9.8 60 226-288 177-236 (291)
253 1uju_A Scribble; PDZ domain, c 98.1 5.7E-06 1.9E-10 65.0 6.2 81 87-171 11-106 (111)
254 1uew_A Membrane associated gua 98.1 1.6E-05 5.6E-10 62.7 8.9 82 83-169 8-103 (114)
255 2dkr_A LIN-7 homolog B; LIN-7B 98.1 9.9E-06 3.4E-10 61.1 7.3 79 87-169 7-90 (93)
256 3e17_A Tight junction protein 98.1 1E-05 3.6E-10 61.4 7.3 70 94-171 14-83 (88)
257 2csj_A TJP2 protein; PDZ domai 98.1 1.9E-05 6.5E-10 62.6 9.2 83 81-169 10-104 (117)
258 3tsv_A Tight junction protein 98.1 1.5E-05 5.3E-10 64.5 8.8 72 90-168 36-111 (124)
259 2kpk_A Membrane-associated gua 98.1 7.9E-06 2.7E-10 66.2 7.0 82 85-170 18-106 (129)
260 4a1s_A PINS, partner of inscut 98.1 1.4E-05 4.7E-10 71.5 9.3 99 184-282 166-293 (411)
261 2dls_A PDZ-rhogef, RHO guanine 98.1 2.5E-05 8.5E-10 59.5 9.3 78 85-170 8-88 (93)
262 3sf4_A G-protein-signaling mod 98.0 1.5E-05 5.2E-10 70.1 9.2 64 218-281 270-336 (406)
263 1wfg_A Regulating synaptic mem 98.0 8.3E-06 2.8E-10 66.6 7.0 71 94-168 49-126 (131)
264 2kv8_A RGS12, regulator of G-p 98.0 8.4E-06 2.9E-10 60.5 6.5 77 87-170 4-83 (83)
265 3sf4_A G-protein-signaling mod 98.0 1.5E-05 5.2E-10 70.1 9.1 99 184-282 127-257 (406)
266 2ego_A General receptor for ph 98.0 1.6E-05 5.3E-10 60.9 8.0 76 85-167 4-94 (96)
267 2dc2_A GOPC, golgi associated 98.0 1.2E-05 4.1E-10 62.6 7.4 83 87-173 11-99 (103)
268 3sfj_A TAX1-binding protein 3; 98.0 1.3E-05 4.6E-10 61.7 7.6 70 94-168 20-104 (104)
269 2xpi_A Anaphase-promoting comp 98.0 1.1E-05 3.8E-10 75.9 8.5 63 220-284 480-548 (597)
270 3r68_A Na(+)/H(+) exchange reg 98.0 1.3E-05 4.5E-10 60.7 7.4 80 87-171 7-90 (95)
271 1ujd_A KIAA0559 protein; PDZ d 98.0 2.1E-05 7.3E-10 62.5 8.9 85 82-170 9-110 (117)
272 1v5q_A GRIP1 homolog, glutamat 98.0 1.8E-05 6E-10 63.5 8.4 88 80-171 10-109 (122)
273 2rcz_A Tight junction protein 98.0 8.2E-06 2.8E-10 59.5 5.9 67 92-168 12-80 (81)
274 1x6d_A Interleukin-16; PDZ dom 98.0 1.1E-05 3.6E-10 64.1 6.9 86 82-171 12-105 (119)
275 4a1s_A PINS, partner of inscut 98.0 1.6E-05 5.6E-10 71.1 8.9 65 218-282 89-156 (411)
276 3ro2_A PINS homolog, G-protein 98.0 1.8E-05 6.2E-10 66.8 8.7 66 218-283 46-114 (338)
277 4amh_A Disks large homolog 1; 98.0 1.5E-05 5.2E-10 62.5 7.5 75 92-170 12-93 (106)
278 2cs5_A Tyrosine-protein phosph 98.0 1.3E-05 4.4E-10 63.7 7.2 81 85-169 15-106 (119)
279 1pc2_A Mitochondria fission pr 98.0 1.9E-05 6.5E-10 67.5 8.4 71 215-287 32-106 (152)
280 3cyy_A Tight junction protein 98.0 1.9E-05 6.4E-10 59.4 7.4 66 93-168 15-82 (92)
281 2v90_A PDZ domain-containing p 98.0 2E-05 6.8E-10 60.0 7.4 74 93-171 14-91 (96)
282 1b8q_A Protein (neuronal nitri 97.9 1.2E-05 4.2E-10 64.5 6.1 81 85-171 8-96 (127)
283 4e34_A Golgi-associated PDZ an 97.9 2.4E-05 8.3E-10 58.4 7.4 77 87-167 4-86 (87)
284 1q3o_A Shank1; PDZ, GKAP, pept 97.9 3.6E-05 1.2E-09 60.1 8.6 78 87-169 9-104 (109)
285 2eeg_A PDZ and LIM domain prot 97.9 1.5E-05 5.1E-10 60.8 6.1 77 87-168 10-90 (94)
286 2edz_A PDZ domain-containing p 97.9 3.5E-05 1.2E-09 60.8 8.4 78 86-168 14-96 (114)
287 1dce_A Protein (RAB geranylger 97.9 1.7E-05 5.7E-10 78.9 8.0 83 203-288 94-180 (567)
288 3ngh_A PDZ domain-containing p 97.9 1.4E-05 4.9E-10 61.9 5.9 71 93-168 13-84 (106)
289 2eei_A PDZ domain-containing p 97.9 1.4E-05 4.8E-10 61.9 5.8 80 87-171 10-93 (106)
290 3r0h_A INAD, inactivation-NO-a 97.9 3.8E-05 1.3E-09 65.6 9.1 84 85-173 113-200 (206)
291 3r0h_A INAD, inactivation-NO-a 97.9 4E-05 1.4E-09 65.4 9.2 82 84-169 17-108 (206)
292 1vb7_A PDZ and LIM domain 2; P 97.9 1.4E-05 4.8E-10 60.9 5.6 77 87-168 8-88 (94)
293 3qwp_A SET and MYND domain-con 97.9 2.6E-05 8.9E-10 75.2 8.8 63 219-281 333-400 (429)
294 3qou_A Protein YBBN; thioredox 97.9 1.2E-05 4.3E-10 71.3 6.0 65 216-283 118-182 (287)
295 2kat_A Uncharacterized protein 97.9 1.8E-05 6.1E-10 59.6 6.0 52 232-286 2-53 (115)
296 2vsp_A PDZ domain-containing p 97.9 1.4E-05 4.7E-10 60.5 5.4 78 87-169 5-86 (91)
297 2gzv_A PRKCA-binding protein; 97.9 4.1E-05 1.4E-09 61.1 8.3 78 87-168 26-109 (114)
298 3bpu_A Membrane-associated gua 97.9 6.3E-05 2.2E-09 56.3 8.9 77 85-168 3-85 (88)
299 3dra_A Protein farnesyltransfe 97.9 6.3E-05 2.2E-09 69.7 10.8 112 169-287 23-145 (306)
300 2jxo_A Ezrin-radixin-moesin-bi 97.9 3E-05 1E-09 59.3 7.0 73 88-167 12-91 (98)
301 2xm6_A Protein corresponding t 97.9 5.6E-05 1.9E-09 71.1 10.4 93 186-283 330-434 (490)
302 3nfk_A Tyrosine-protein phosph 97.9 3.5E-05 1.2E-09 59.8 7.5 79 85-167 17-106 (107)
303 2f5y_A Regulator of G-protein 97.9 3.7E-05 1.2E-09 58.2 7.3 76 88-170 6-84 (91)
304 3k1r_A Harmonin; protein-prote 97.9 2.7E-05 9.3E-10 67.0 7.4 78 85-168 84-167 (192)
305 1ujv_A Membrane associated gua 97.9 6E-05 2.1E-09 58.1 8.6 78 84-169 9-91 (96)
306 2eaq_A LIM domain only protein 97.9 3.4E-05 1.2E-09 57.9 6.9 69 94-168 18-88 (90)
307 1dce_A Protein (RAB geranylger 97.9 5.6E-05 1.9E-09 75.2 10.4 82 203-287 50-144 (567)
308 1wi4_A Synip, syntaxin binding 97.9 6.3E-05 2.2E-09 59.4 8.6 78 87-168 17-104 (109)
309 3gsl_A Disks large homolog 4; 97.8 5.3E-05 1.8E-09 63.5 8.6 82 84-169 4-95 (196)
310 1v6b_A Harmonin isoform A1; st 97.8 7.6E-05 2.6E-09 59.6 9.1 82 86-171 21-109 (118)
311 2kc7_A BFR218_protein; tetratr 97.8 5E-06 1.7E-10 60.7 1.9 70 204-284 22-93 (99)
312 3qe1_A Sorting nexin-27, G pro 97.8 5.9E-05 2E-09 58.5 8.1 79 87-170 8-103 (107)
313 1uf1_A KIAA1526 protein; PDZ d 97.8 8.2E-05 2.8E-09 59.8 8.6 80 87-172 24-107 (128)
314 4f3v_A ESX-1 secretion system 97.8 6.1E-05 2.1E-09 69.8 8.8 66 217-284 173-240 (282)
315 2z17_A Pleckstrin homology SEC 97.8 3E-05 1E-09 60.1 5.7 72 87-165 17-103 (104)
316 1uez_A KIAA1526 protein; PDZ d 97.8 4.2E-05 1.4E-09 58.9 6.1 77 86-168 9-92 (101)
317 1v5l_A PDZ and LIM domain 3; a 97.8 2.2E-05 7.6E-10 60.9 4.6 76 88-170 10-89 (103)
318 1zu2_A Mitochondrial import re 97.8 1.4E-05 4.7E-10 68.6 3.6 58 226-286 13-80 (158)
319 1x5n_A Harmonin; PDZ domain, u 97.8 0.00011 3.6E-09 57.7 8.5 71 92-168 26-98 (114)
320 2d8i_A T-cell lymphoma invasio 97.8 8.1E-05 2.8E-09 59.8 7.9 85 80-171 10-103 (114)
321 2ond_A Cleavage stimulation fa 97.7 0.00023 7.9E-09 62.9 11.0 82 203-287 37-134 (308)
322 1z87_A Alpha-1-syntrophin; pro 97.7 7.9E-05 2.7E-09 68.5 8.1 85 82-170 74-164 (263)
323 2pzd_A Serine protease HTRA2; 97.7 7.8E-05 2.7E-09 58.4 7.0 58 104-169 34-91 (113)
324 1ufx_A KIAA1526 protein; PDZ d 97.7 6.2E-05 2.1E-09 58.9 6.3 79 86-168 7-96 (103)
325 3kzd_A TIAM-1, T-lymphoma inva 97.7 0.00011 3.8E-09 57.8 7.7 79 82-167 3-90 (94)
326 1p1d_A PDZ45, glutamate recept 97.7 0.00014 4.8E-09 62.1 8.6 81 85-169 6-98 (196)
327 2yub_A LIMK-2, LIM domain kina 97.7 0.00018 6E-09 58.0 8.5 70 94-170 28-106 (118)
328 3tsz_A Tight junction protein 97.6 0.0001 3.4E-09 70.9 8.1 75 89-168 15-91 (391)
329 3gsl_A Disks large homolog 4; 97.6 0.00014 4.7E-09 60.9 7.9 81 86-170 101-191 (196)
330 1hz4_A MALT regulatory protein 97.6 0.00024 8.1E-09 63.3 9.9 64 218-281 138-203 (373)
331 3shw_A Tight junction protein 97.6 0.00011 3.6E-09 72.8 8.2 76 88-168 4-83 (468)
332 2vsv_A Rhophilin-2; scaffold p 97.6 0.00016 5.6E-09 57.7 7.8 76 88-170 26-105 (109)
333 3bee_A Putative YFRE protein; 97.6 0.00022 7.6E-09 54.7 8.0 66 216-284 7-75 (93)
334 2xm6_A Protein corresponding t 97.6 0.00019 6.6E-09 67.5 9.2 59 219-282 151-217 (490)
335 2qbw_A PDZ-fibronectin fusion 97.6 0.00021 7E-09 60.6 8.5 71 93-169 2-82 (195)
336 3khf_A Microtubule-associated 97.6 9.4E-05 3.2E-09 56.5 5.5 72 92-168 12-92 (99)
337 3dra_A Protein farnesyltransfe 97.6 0.00012 4.1E-09 67.9 7.2 98 188-288 71-182 (306)
338 4f3v_A ESX-1 secretion system 97.6 0.00016 5.4E-09 67.0 7.9 131 144-281 64-200 (282)
339 1hz4_A MALT regulatory protein 97.5 0.00033 1.1E-08 62.4 9.5 66 218-283 96-166 (373)
340 2qt5_A Glutamate receptor-inte 97.5 0.00023 7.8E-09 60.8 8.0 79 85-169 106-195 (200)
341 2kjd_A Sodium/hydrogen exchang 97.5 0.00017 5.8E-09 57.6 6.6 75 87-168 11-92 (128)
342 1wif_A RSGI RUH-020, riken cDN 97.5 0.00012 4.2E-09 60.1 5.7 83 85-172 27-114 (126)
343 1klx_A Cysteine rich protein B 97.5 0.00041 1.4E-08 55.4 8.7 59 221-284 31-93 (138)
344 2edv_A FERM and PDZ domain-con 97.5 0.00014 4.8E-09 55.8 5.6 77 85-169 8-89 (96)
345 3n71_A Histone lysine methyltr 97.5 0.0004 1.4E-08 68.3 10.0 65 217-281 311-380 (490)
346 2qt5_A Glutamate receptor-inte 97.5 0.00036 1.2E-08 59.5 8.5 78 85-168 7-92 (200)
347 3q7a_A Farnesyltransferase alp 97.5 0.00054 1.9E-08 65.1 10.4 114 167-287 42-160 (349)
348 3dss_A Geranylgeranyl transfer 97.4 0.00072 2.5E-08 63.7 10.9 82 204-288 96-181 (331)
349 1r6j_A Syntenin 1; PDZ, membra 97.4 0.0004 1.4E-08 53.1 7.1 73 86-168 5-81 (82)
350 1w9e_A Syntenin 1; cell adhesi 97.4 0.00034 1.2E-08 58.3 7.3 73 87-167 6-85 (166)
351 1p1d_A PDZ45, glutamate recept 97.4 0.00046 1.6E-08 58.9 8.0 77 86-168 108-194 (196)
352 3qik_A Phosphatidylinositol 3, 97.4 0.00024 8.3E-09 56.9 5.8 70 91-166 26-98 (101)
353 2xkx_A Disks large homolog 4; 97.4 0.00039 1.3E-08 71.3 8.8 83 85-171 307-393 (721)
354 1y7n_A Amyloid beta A4 precurs 97.4 0.00027 9.2E-09 54.1 5.6 64 94-167 25-88 (90)
355 3e4b_A ALGK; tetratricopeptide 97.4 0.00041 1.4E-08 65.7 8.0 80 198-284 265-354 (452)
356 4b4t_Q 26S proteasome regulato 97.3 0.00058 2E-08 61.6 8.1 65 217-281 6-84 (434)
357 2lob_A Golgi-associated PDZ an 96.4 4.1E-05 1.4E-09 61.0 0.0 74 87-165 29-109 (112)
358 3qww_A SET and MYND domain-con 97.3 0.0011 3.6E-08 64.3 9.8 62 220-281 303-369 (433)
359 3qwp_A SET and MYND domain-con 97.2 0.00096 3.3E-08 64.2 9.4 65 217-281 289-358 (429)
360 2yuy_A RHO GTPase activating p 97.2 7.9E-05 2.7E-09 60.0 1.5 60 105-169 61-120 (126)
361 3e4b_A ALGK; tetratricopeptide 97.2 0.0005 1.7E-08 65.2 7.0 59 219-283 217-282 (452)
362 2xkx_A Disks large homolog 4; 97.2 0.0007 2.4E-08 69.5 8.2 82 83-168 57-148 (721)
363 3q7a_A Farnesyltransferase alp 97.2 0.00047 1.6E-08 65.6 6.3 99 187-288 91-203 (349)
364 1vae_A Rhophilin 2, rhophilin, 97.2 0.00036 1.2E-08 55.5 4.6 72 93-171 26-98 (111)
365 3dss_A Geranylgeranyl transfer 97.1 0.0019 6.5E-08 60.8 9.2 80 205-287 53-145 (331)
366 2ooe_A Cleavage stimulation fa 97.0 0.0046 1.6E-07 58.6 11.6 80 204-286 260-355 (530)
367 2ooe_A Cleavage stimulation fa 97.0 0.0018 6.1E-08 61.5 8.2 67 216-284 322-388 (530)
368 2p3w_A Probable serine proteas 97.0 0.0019 6.5E-08 50.4 6.9 58 104-169 34-91 (112)
369 2l97_A HTRA, putative serine p 96.9 0.0023 7.7E-08 52.2 7.5 57 104-168 56-114 (134)
370 2krg_A Na(+)/H(+) exchange reg 96.9 0.00066 2.3E-08 60.4 4.5 76 87-167 11-91 (216)
371 3suz_A Amyloid beta A4 precurs 96.9 0.00069 2.4E-08 64.7 4.9 78 87-170 206-295 (388)
372 3rle_A Golgi reassembly-stacki 96.9 0.0028 9.4E-08 55.1 8.3 70 94-171 96-172 (209)
373 1nzn_A CGI-135 protein, fissio 96.8 0.0068 2.3E-07 50.2 9.4 72 214-287 34-109 (126)
374 3i18_A LMO2051 protein; alpha- 96.8 0.004 1.4E-07 48.0 7.4 59 103-169 5-65 (100)
375 3ma5_A Tetratricopeptide repea 96.8 0.0006 2.1E-08 50.9 2.5 64 185-248 8-74 (100)
376 1te0_A Protease DEGS; two doma 96.8 0.003 1E-07 58.1 7.6 68 95-169 223-303 (318)
377 2kl1_A YLBL protein; structure 96.7 0.0022 7.7E-08 49.1 5.6 58 104-169 4-63 (94)
378 4fgm_A Aminopeptidase N family 96.7 0.0015 5E-08 66.2 5.7 66 94-168 486-553 (597)
379 3ly7_A Transcriptional activat 96.7 0.0029 1E-07 60.9 7.5 60 221-284 283-342 (372)
380 4b4t_Q 26S proteasome regulato 96.7 0.0091 3.1E-07 53.7 9.9 65 218-282 138-205 (434)
381 2i6v_A General secretion pathw 96.6 0.0018 6.1E-08 48.6 4.1 69 92-168 4-77 (87)
382 2kjp_A Uncharacterized protein 96.6 0.0012 4.2E-08 50.6 3.2 56 106-169 2-59 (91)
383 1y8t_A Hypothetical protein RV 96.6 0.0048 1.7E-07 56.7 7.7 70 95-171 231-303 (324)
384 3id1_A Regulator of sigma E pr 96.5 0.0028 9.6E-08 48.7 4.8 57 107-170 4-62 (95)
385 1xi4_A Clathrin heavy chain; a 96.4 0.012 4.1E-07 65.6 10.7 59 216-282 1106-1164(1630)
386 1fc6_A Photosystem II D1 prote 96.4 0.0062 2.1E-07 57.7 7.4 71 95-170 87-160 (388)
387 3o48_A Mitochondria fission 1 96.3 0.012 4.1E-07 49.4 7.9 72 215-288 40-114 (134)
388 3ffl_A Anaphase-promoting comp 96.3 0.0073 2.5E-07 52.4 6.7 61 217-277 65-147 (167)
389 2v5f_A Prolyl 4-hydroxylase su 96.3 0.019 6.4E-07 43.6 8.1 72 185-259 13-87 (104)
390 2zpm_A Regulator of sigma E pr 96.3 0.0032 1.1E-07 47.0 3.7 56 107-169 6-62 (91)
391 1y8m_A FIS1; mitochondria, unk 96.2 0.034 1.2E-06 47.2 10.2 73 213-287 37-112 (144)
392 3soe_A Membrane-associated gua 96.2 0.023 7.7E-07 46.0 8.7 78 85-170 12-94 (113)
393 3bee_A Putative YFRE protein; 96.2 0.025 8.7E-07 43.0 8.6 52 202-253 29-81 (93)
394 1lcy_A HTRA2 serine protease; 96.2 0.0099 3.4E-07 55.0 7.3 58 104-169 255-312 (325)
395 3stj_A Protease DEGQ; serine p 96.2 0.0052 1.8E-07 57.7 5.4 69 95-170 242-323 (345)
396 2i4s_A General secretion pathw 96.1 0.0088 3E-07 46.4 5.6 56 106-168 38-95 (105)
397 4a8c_A Periplasmic PH-dependen 96.0 0.009 3.1E-07 57.7 6.2 59 105-170 363-421 (436)
398 3u64_A Protein TP_0956; tetrat 95.9 0.033 1.1E-06 52.3 9.7 88 195-284 174-272 (301)
399 2hga_A Conserved protein MTH13 95.7 0.024 8.3E-07 45.9 6.7 57 102-167 22-80 (125)
400 3qo6_A Protease DO-like 1, chl 95.6 0.014 4.6E-07 54.6 5.8 69 95-170 235-322 (348)
401 1b89_A Protein (clathrin heavy 95.5 0.0095 3.2E-07 58.7 4.4 50 218-278 125-174 (449)
402 3pv2_A DEGQ; trypsin fold, PDZ 95.4 0.016 5.6E-07 56.3 5.5 57 105-168 386-442 (451)
403 3rle_A Golgi reassembly-stacki 95.2 0.022 7.7E-07 49.3 5.3 58 105-168 16-75 (209)
404 1w9e_A Syntenin 1; cell adhesi 95.2 0.02 6.9E-07 47.4 4.7 45 85-135 88-136 (166)
405 3k50_A Putative S41 protease; 95.2 0.033 1.1E-06 53.8 6.8 56 106-169 91-146 (403)
406 3pv2_A DEGQ; trypsin fold, PDZ 95.1 0.032 1.1E-06 54.3 6.6 70 95-171 260-343 (451)
407 1b89_A Protein (clathrin heavy 94.9 0.028 9.6E-07 55.3 5.6 65 216-282 149-237 (449)
408 1pc2_A Mitochondria fission pr 94.7 0.033 1.1E-06 47.3 4.9 36 215-250 71-106 (152)
409 4a8c_A Periplasmic PH-dependen 94.7 0.042 1.4E-06 53.0 6.2 59 105-170 263-323 (436)
410 1ky9_A Protease DO, DEGP, HTRA 94.5 0.0063 2.1E-07 59.2 0.0 67 95-168 372-439 (448)
411 3ly7_A Transcriptional activat 94.4 0.12 4.2E-06 49.7 8.6 71 213-283 194-308 (372)
412 3num_A Serine protease HTRA1; 94.3 0.0075 2.6E-07 55.8 0.0 57 104-168 253-309 (332)
413 1xi4_A Clathrin heavy chain; a 94.3 0.12 4.2E-06 57.7 9.3 79 204-282 1210-1310(1630)
414 3mv2_B Coatomer subunit epsilo 94.1 0.22 7.4E-06 46.5 9.4 67 216-283 101-167 (310)
415 3u64_A Protein TP_0956; tetrat 93.5 0.11 3.7E-06 48.9 6.2 53 231-284 179-236 (301)
416 1k32_A Tricorn protease; prote 93.3 0.12 4.1E-06 53.6 6.8 69 94-170 738-816 (1045)
417 4gns_B Protein CSD3, chitin bi 93.3 0.13 4.4E-06 53.6 7.0 54 222-278 344-397 (754)
418 3suz_A Amyloid beta A4 precurs 92.3 0.025 8.4E-07 53.9 0.0 55 108-167 318-372 (388)
419 1nzn_A CGI-135 protein, fissio 91.9 0.22 7.4E-06 41.1 5.3 38 214-251 73-110 (126)
420 3mv2_B Coatomer subunit epsilo 91.9 0.6 2.1E-05 43.5 8.9 58 220-281 179-240 (310)
421 4fln_A Protease DO-like 2, chl 91.8 0.33 1.1E-05 48.7 7.5 39 95-135 255-305 (539)
422 1ky9_A Protease DO, DEGP, HTRA 91.8 0.13 4.4E-06 50.0 4.3 58 105-169 286-345 (448)
423 3o48_A Mitochondria fission 1 89.6 0.65 2.2E-05 38.8 6.1 37 215-251 78-114 (134)
424 3ffl_A Anaphase-promoting comp 88.7 0.87 3E-05 39.3 6.4 64 219-282 24-93 (167)
425 1y8m_A FIS1; mitochondria, unk 88.6 1.1 3.8E-05 37.8 7.0 37 215-251 77-113 (144)
426 4g26_A Pentatricopeptide repea 87.5 4.3 0.00015 39.4 11.3 61 220-284 145-207 (501)
427 2ijq_A Hypothetical protein; s 86.5 3.8 0.00013 35.0 9.2 65 216-280 33-103 (161)
428 4e6h_A MRNA 3'-END-processing 85.8 1.1 3.7E-05 45.7 6.3 76 204-282 331-408 (679)
429 2ff4_A Probable regulatory pro 85.7 3.5 0.00012 38.6 9.3 57 220-279 176-232 (388)
430 2w2u_A Hypothetical P60 katani 84.7 1.6 5.5E-05 33.2 5.3 31 213-243 17-47 (83)
431 1ya0_A SMG-7 transcript varian 84.0 2.7 9.3E-05 41.5 8.0 60 219-281 156-215 (497)
432 4b4t_R RPN7, 26S proteasome re 83.6 1.3 4.6E-05 42.1 5.5 63 219-281 135-197 (429)
433 2v6y_A AAA family ATPase, P60 82.8 1.6 5.6E-05 33.0 4.6 30 214-243 10-39 (83)
434 3kae_A CDC27, possible protein 82.0 10 0.00036 33.8 10.1 67 216-282 63-144 (242)
435 4h7y_A Dual specificity protei 81.9 2 6.7E-05 37.0 5.3 64 220-287 66-129 (161)
436 2vkj_A TM1634; membrane protei 81.5 3.4 0.00011 32.9 6.1 50 215-265 53-103 (106)
437 3ax2_A Mitochondrial import re 81.1 2.5 8.6E-05 31.8 5.1 33 218-250 20-52 (73)
438 3spa_A Mtrpol, DNA-directed RN 80.7 11 0.00036 41.2 11.5 97 184-284 134-233 (1134)
439 4a5x_A MITD1, MIT domain-conta 80.6 2.3 8E-05 32.4 4.9 29 215-243 16-44 (86)
440 4g26_A Pentatricopeptide repea 80.2 5.5 0.00019 38.6 8.6 61 220-284 110-172 (501)
441 2cwy_A Hypothetical protein TT 77.5 4.1 0.00014 31.5 5.5 60 219-280 5-67 (94)
442 3kae_A CDC27, possible protein 76.3 6.8 0.00023 34.9 7.1 55 219-281 37-91 (242)
443 1wfd_A Hypothetical protein 15 75.9 3.8 0.00013 31.5 4.9 29 215-243 15-43 (93)
444 2v6x_A Vacuolar protein sortin 75.0 4 0.00014 30.6 4.6 28 216-243 14-41 (85)
445 2cpt_A SKD1 protein, vacuolar 72.4 3.1 0.00011 33.5 3.7 28 216-243 19-46 (117)
446 2uy1_A Cleavage stimulation fa 70.5 7.7 0.00026 37.3 6.6 52 231-286 195-246 (493)
447 2dl1_A Spartin; SPG20, MIT, st 69.7 6.8 0.00023 31.9 5.1 38 205-242 12-49 (116)
448 3txn_A 26S proteasome regulato 66.5 14 0.00049 35.3 7.6 61 220-280 104-167 (394)
449 3eab_A Spastin; spastin, MIT, 64.9 5.9 0.0002 30.9 3.7 37 206-242 7-46 (89)
450 3mkq_A Coatomer beta'-subunit; 64.7 48 0.0016 32.0 11.0 46 225-278 662-707 (814)
451 1om2_A Protein (mitochondrial 62.5 5.1 0.00017 31.6 2.9 31 218-248 23-53 (95)
452 2crb_A Nuclear receptor bindin 60.6 8 0.00027 30.6 3.7 23 220-242 20-42 (97)
453 1wy6_A Hypothetical protein ST 60.3 57 0.0019 28.0 9.2 66 216-284 91-157 (172)
454 1zbp_A Hypothetical protein VP 59.2 25 0.00084 32.5 7.4 59 223-284 5-63 (273)
455 4fhn_B Nucleoporin NUP120; pro 56.2 26 0.00087 37.4 7.9 69 217-285 844-932 (1139)
456 2npm_A 14-3-3 domain containin 54.3 26 0.00088 32.0 6.6 54 232-285 173-231 (260)
457 4e6h_A MRNA 3'-END-processing 53.4 21 0.00071 36.3 6.4 50 231-281 119-172 (679)
458 2br9_A 14-3-3E, 14-3-3 protein 53.0 23 0.00078 31.8 6.0 53 232-284 147-205 (234)
459 2rpa_A Katanin P60 ATPase-cont 51.6 11 0.00039 28.4 3.2 27 217-243 14-40 (78)
460 3spa_A Mtrpol, DNA-directed RN 48.8 40 0.0014 36.8 7.9 61 220-284 132-197 (1134)
461 3uzd_A 14-3-3 protein gamma; s 47.2 32 0.0011 31.3 6.0 52 232-283 148-205 (248)
462 3ubw_A 14-3-3E, 14-3-3 protein 46.4 33 0.0011 31.5 6.0 52 232-283 173-230 (261)
463 1o9d_A 14-3-3-like protein C; 44.8 32 0.0011 31.4 5.7 51 232-282 152-208 (260)
464 4b4t_S RPN3, 26S proteasome re 43.3 25 0.00087 35.2 5.1 58 226-283 242-301 (523)
465 4fln_A Protease DO-like 2, chl 43.1 35 0.0012 34.1 6.0 58 106-171 416-473 (539)
466 1zbp_A Hypothetical protein VP 42.2 65 0.0022 29.6 7.3 92 186-281 6-129 (273)
467 3iqu_A 14-3-3 protein sigma; s 42.0 35 0.0012 30.7 5.4 52 232-283 150-207 (236)
468 3txn_A 26S proteasome regulato 40.8 1.3E+02 0.0045 28.5 9.5 63 218-280 142-209 (394)
469 4a5x_A MITD1, MIT domain-conta 39.1 31 0.0011 26.0 3.9 29 253-281 17-45 (86)
470 2ff4_A Probable regulatory pro 39.0 1.8E+02 0.0062 26.8 10.1 64 220-283 120-202 (388)
471 3mcx_A SUSD superfamily protei 38.1 71 0.0024 30.3 7.2 52 231-282 176-232 (477)
472 3mkq_A Coatomer beta'-subunit; 37.6 50 0.0017 31.9 6.1 59 219-277 685-761 (814)
473 2crb_A Nuclear receptor bindin 37.2 32 0.0011 27.2 3.8 26 255-280 18-43 (97)
474 1wfd_A Hypothetical protein 15 36.8 48 0.0016 25.2 4.7 27 255-281 18-44 (93)
475 3efz_A 14-3-3 protein; 14-3-3, 36.6 55 0.0019 30.1 5.9 50 232-281 169-226 (268)
476 2w2u_A Hypothetical P60 katani 35.8 51 0.0018 24.7 4.7 26 256-281 23-48 (83)
477 3pjy_A Hypothetical signal pep 35.0 17 0.0006 29.8 2.0 27 104-132 100-126 (136)
478 3myv_A SUSD superfamily protei 34.5 60 0.0021 30.7 6.0 32 251-282 189-220 (454)
479 1jt8_A EIF-1A, probable transl 34.1 29 0.001 27.4 3.1 46 85-132 20-67 (102)
480 4h7y_A Dual specificity protei 33.7 51 0.0017 28.2 4.8 72 215-288 13-95 (161)
481 2ymb_A MITD1, MIT domain-conta 33.2 9 0.00031 35.1 0.0 27 217-243 25-51 (257)
482 2pmr_A Uncharacterized protein 32.6 57 0.0019 25.1 4.5 49 193-241 16-65 (87)
483 2rpa_A Katanin P60 ATPase-cont 32.5 33 0.0011 25.8 3.1 27 255-281 15-41 (78)
484 2v6y_A AAA family ATPase, P60 32.3 63 0.0022 24.0 4.7 14 232-245 9-22 (83)
485 2uy1_A Cleavage stimulation fa 32.1 1.1E+02 0.0038 29.1 7.5 62 216-281 15-77 (493)
486 3qnk_A Putative lipoprotein; a 32.1 74 0.0025 30.7 6.3 33 252-284 182-214 (517)
487 2v6x_A Vacuolar protein sortin 31.5 67 0.0023 23.6 4.7 27 255-281 16-42 (85)
488 2cpt_A SKD1 protein, vacuolar 30.4 58 0.002 25.9 4.4 19 263-281 29-47 (117)
489 2zan_A Vacuolar protein sortin 29.7 11 0.00038 35.8 0.0 29 215-243 11-39 (444)
490 2wb7_A PT26-6P; extra chromoso 29.6 1.4E+02 0.0047 30.0 7.7 51 229-280 453-515 (526)
491 3kez_A Putative sugar binding 28.3 79 0.0027 30.0 5.7 31 251-281 195-225 (461)
492 4b4t_P 26S proteasome regulato 27.8 2.4E+02 0.008 26.7 8.9 62 219-280 181-246 (445)
493 4gq2_M Nucleoporin NUP120; bet 27.5 1.4E+02 0.0047 31.3 7.8 64 218-281 843-926 (950)
494 3jys_A SUSD superfamily protei 27.4 1.6E+02 0.0053 28.4 7.7 38 252-289 188-234 (499)
495 2o8p_A 14-3-3 domain containin 26.6 2.4E+02 0.0083 25.1 8.2 56 226-281 136-197 (227)
496 3lew_A SUSD-like carbohydrate 25.9 1.2E+02 0.0042 29.0 6.6 31 251-281 202-232 (495)
497 3jq1_A SUSD superfamily protei 25.8 75 0.0026 30.4 5.1 31 252-282 180-210 (481)
498 3m7a_A Uncharacterized protein 25.5 20 0.00069 29.7 0.8 24 106-131 116-139 (140)
499 2j3t_D Trafficking protein par 25.0 3.2E+02 0.011 24.2 8.6 74 84-168 25-101 (219)
500 2j5u_A MREC protein; bacterial 24.8 1E+02 0.0034 27.5 5.4 78 87-173 135-217 (255)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.32 E-value=6.7e-12 Score=99.61 Aligned_cols=100 Identities=13% Similarity=0.121 Sum_probs=79.8
Q ss_pred HHhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHH
Q 022783 185 RAERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACC 261 (292)
Q Consensus 185 ~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Acc 261 (292)
.+.+|.|+..-..++.+++ .|.+..++.+.. .-++++|..++++|+|++|++.|++||+++|++ ..+|+|+|.|
T Consensus 14 ~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---~~a~~~lg~~ 90 (126)
T 4gco_A 14 QEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF---IKGYIRKAAC 90 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh---hHHHHHHHHH
Confidence 3445666666555555554 555555555544 344699999999999999999999999999974 5679999999
Q ss_pred HHhcCCHHHHHHHHHHHHHhCccChh
Q 022783 262 YSKLNQVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 262 yakLgq~eeALe~LekAIelG~~Df~ 287 (292)
|..+|++++|++++++||++.+++..
T Consensus 91 ~~~~~~~~~A~~~~~~al~l~P~~~~ 116 (126)
T 4gco_A 91 LVAMREWSKAQRAYEDALQVDPSNEE 116 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHCCCHHHHHHHHHHHHHHCcCCHH
Confidence 99999999999999999999877654
No 2
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.24 E-value=1.5e-11 Score=102.25 Aligned_cols=98 Identities=5% Similarity=-0.044 Sum_probs=80.6
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhhHhHHH-HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHH
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQKERREQ-DLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVAC 260 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~~~-~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Ac 260 (292)
..++++.|.+....++.+++ .|.+...+.+.... ++++|..+++.|+|++|+++|++|++++|++ ..+|||+|.
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~---~~~~~~lg~ 112 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKND---YTPVFHTGQ 112 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSC---CHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCC---cHHHHHHHH
Confidence 45666777777666666665 66666655555444 4699999999999999999999999999974 457999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 261 CYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 261 cyakLgq~eeALe~LekAIelG~~ 284 (292)
||..+|++++|+.+|++|+++..+
T Consensus 113 ~~~~lg~~~eA~~~~~~al~l~~~ 136 (151)
T 3gyz_A 113 CQLRLKAPLKAKECFELVIQHSND 136 (151)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999865
No 3
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.24 E-value=2.3e-11 Score=96.18 Aligned_cols=64 Identities=19% Similarity=0.252 Sum_probs=59.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
..++|+.+++.|+|++|++.|++||+++|++ ..+|+|+|.||..+|++++|+++|++||++..+
T Consensus 11 ~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~---~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~ 74 (127)
T 4gcn_A 11 EKDLGNAAYKQKDFEKAHVHYDKAIELDPSN---ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRE 74 (127)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcc
Confidence 3589999999999999999999999999974 568999999999999999999999999998754
No 4
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.23 E-value=4.6e-11 Score=94.73 Aligned_cols=69 Identities=17% Similarity=0.379 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccChh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df~ 287 (292)
....++|+.+++.|+|++|++.|++||+++|++ ..+|+|+|.||.++|++++|+.+|++||++..++..
T Consensus 14 ~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 82 (126)
T 4gco_A 14 QEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPEN---AILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIK 82 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhH
Confidence 455699999999999999999999999999974 568999999999999999999999999999877543
No 5
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.21 E-value=6.1e-11 Score=96.08 Aligned_cols=95 Identities=6% Similarity=0.089 Sum_probs=57.7
Q ss_pred cccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcC
Q 022783 190 SGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLN 266 (292)
Q Consensus 190 ~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLg 266 (292)
.|.+.....+++.+ .+.++....+.. ...+..|..|++.|+|++|++.|+++|+++|++ ..+|+|+|.||..+|
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~---~~a~~~lg~~~~~~~ 79 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERD---PKAHRFLGLLYELEE 79 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTT
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcC
Confidence 34444444555443 333333322222 223577777777777777777777777777763 456777777777777
Q ss_pred CHHHHHHHHHHHHHhCccChh
Q 022783 267 QVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 267 q~eeALe~LekAIelG~~Df~ 287 (292)
++++|+.++++|+++..++..
T Consensus 80 ~~~~A~~~~~~al~~~p~~~~ 100 (150)
T 4ga2_A 80 NTDKAVECYRRSVELNPTQKD 100 (150)
T ss_dssp CHHHHHHHHHHHHHHCTTCHH
T ss_pred chHHHHHHHHHHHHhCCCCHH
Confidence 777777777777777666543
No 6
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.19 E-value=9.5e-11 Score=94.22 Aligned_cols=69 Identities=16% Similarity=0.024 Sum_probs=63.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccChhhh
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDFKVI 289 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df~~I 289 (292)
++++|..+++.|+|++|+..|++||+++|++ ..+||++|.||..+|++++|+.+|++|+++..++-..|
T Consensus 66 ~~nla~~~~~~~~~~~A~~~~~~al~~~p~~---~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~ 134 (162)
T 3rkv_A 66 YANMSQCYLNIGDLHEAEETSSEVLKREETN---EKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVV 134 (162)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHhcCCcc---hHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHH
Confidence 4699999999999999999999999999974 56899999999999999999999999999988776443
No 7
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.19 E-value=4e-11 Score=103.13 Aligned_cols=97 Identities=10% Similarity=-0.002 Sum_probs=78.5
Q ss_pred HhhccccchhhHHHHHHH--hhHHHHHhhHh-------HH------HHHHHHHHHHHcCCHHHHHHHHHHHHcC------
Q 022783 186 AERNSGVISNRVREIQMQ--NYMKKKEQKER-------RE------QDLREGLQLYRTGKYEVAREKFESVLGS------ 244 (292)
Q Consensus 186 a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~-------~~------~~~n~G~~L~k~gdYeeAIe~fekALel------ 244 (292)
.+.|.|+..-.+..++++ .|.++..+.+. .. -+.|+|..+.++|+|++|+.+|++||++
T Consensus 13 ~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e 92 (159)
T 2hr2_A 13 LALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGE 92 (159)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcccc
Confidence 345666666666666664 67777666665 21 3459999999999999999999999999
Q ss_pred -CCCccchhHHH----HHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 245 -KPTPEESSVAS----YNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 245 -dP~~~d~a~a~----YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
+|+ ...+| ||+|.++..+|++++|+.+|++||++-.+|
T Consensus 93 ~~pd---~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d 135 (159)
T 2hr2_A 93 LNQD---EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 135 (159)
T ss_dssp TTST---HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred CCCc---hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 996 35678 999999999999999999999999987654
No 8
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.16 E-value=3.7e-11 Score=95.00 Aligned_cols=100 Identities=12% Similarity=0.105 Sum_probs=80.6
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhhHhHHH-HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccc----hhHHHH
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQKERREQ-DLREGLQLYRTGKYEVAREKFESVLGSKPTPEE----SSVASY 256 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~~~-~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d----~a~a~Y 256 (292)
-.+++|.|++.-..++++++ .|.++..+.+.... +.++|..++++|+|++|++.|++||+++|+... .+.+|+
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~ 87 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMS 87 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHH
Confidence 45666777777777777675 66666666555444 459999999999999999999999999886422 256899
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 257 NVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 257 N~AccyakLgq~eeALe~LekAIelG~ 283 (292)
|+|.||..+|++++|++.+++||+...
T Consensus 88 ~lg~~~~~~~~~~~A~~~~~kal~~~~ 114 (127)
T 4gcn_A 88 RAGNAFQKQNDLSLAVQWFHRSLSEFR 114 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCc
Confidence 999999999999999999999999854
No 9
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.16 E-value=7.4e-11 Score=101.45 Aligned_cols=75 Identities=15% Similarity=0.142 Sum_probs=64.9
Q ss_pred HhHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccc---------hhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--
Q 022783 213 ERREQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEE---------SSVASYNVACCYSKLNQVKAGLSALEDALLA-- 281 (292)
Q Consensus 213 ~~~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d---------~a~a~YN~AccyakLgq~eeALe~LekAIel-- 281 (292)
.+.+.+++.|+.+++.|+|++|+++|++||+++|++.+ ...+|+|+|.|+.++|++++|+.+|++||++
T Consensus 9 ~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 9 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhh
Confidence 34577889999999999999999999999999998311 1348999999999999999999999999999
Q ss_pred -----CccChh
Q 022783 282 -----GYEDFK 287 (292)
Q Consensus 282 -----G~~Df~ 287 (292)
..++.+
T Consensus 89 ~~~e~~pd~~~ 99 (159)
T 2hr2_A 89 RRGELNQDEGK 99 (159)
T ss_dssp HHCCTTSTHHH
T ss_pred ccccCCCchHH
Confidence 766543
No 10
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.11 E-value=1.9e-10 Score=88.24 Aligned_cols=93 Identities=12% Similarity=0.054 Sum_probs=72.6
Q ss_pred hhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHH
Q 022783 187 ERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYS 263 (292)
Q Consensus 187 ~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accya 263 (292)
+++.|...-..++.+++ .|.+...+.+.. .-++++|..+++.|+|++|+..|+++|+++|++ ..+|+++|.||.
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~ 83 (126)
T 3upv_A 7 ARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF---VRAYIRKATAQI 83 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc---HHHHHHHHHHHH
Confidence 34445444444444444 444444444443 345699999999999999999999999999974 567999999999
Q ss_pred hcCCHHHHHHHHHHHHHhC
Q 022783 264 KLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 264 kLgq~eeALe~LekAIelG 282 (292)
.+|++++|+.++++|+++.
T Consensus 84 ~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 84 AVKEYASALETLDAARTKD 102 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHhC
Confidence 9999999999999999997
No 11
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.09 E-value=3e-10 Score=91.47 Aligned_cols=100 Identities=15% Similarity=0.015 Sum_probs=79.2
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHH
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVAC 260 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Ac 260 (292)
..++++.|.+....++.+++ .|.+...+.+.. .-++++|..+++.|+|++|+..|+++|+++|++ ..+|+|+|.
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~lg~ 87 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKY---SKAWSRLGL 87 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---HHHHHHHHH
Confidence 34555666666665555554 555555544443 345699999999999999999999999999974 568999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 261 CYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 261 cyakLgq~eeALe~LekAIelG~~Df 286 (292)
||..+|++++|+.++++|+++..++.
T Consensus 88 ~~~~~g~~~~A~~~~~~al~~~p~~~ 113 (164)
T 3sz7_A 88 ARFDMADYKGAKEAYEKGIEAEGNGG 113 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHSSSC
T ss_pred HHHHccCHHHHHHHHHHHHHhCCCch
Confidence 99999999999999999999987653
No 12
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.08 E-value=3.8e-10 Score=93.71 Aligned_cols=81 Identities=14% Similarity=0.097 Sum_probs=70.1
Q ss_pred hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 204 NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 204 ~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
.+.+...+.+.. ...+++|..+++.|+|++|+..|++++.++|++ ..+|+|+|.||..+|++++|+.+|++|+++.
T Consensus 24 ~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~---~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~ 100 (151)
T 3gyz_A 24 TLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYN---VDYIMGLAAIYQIKEQFQQAADLYAVAFALG 100 (151)
T ss_dssp CTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred CHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHccHHHHHHHHHHHHhhC
Confidence 566666666655 345699999999999999999999999999974 5679999999999999999999999999998
Q ss_pred ccChh
Q 022783 283 YEDFK 287 (292)
Q Consensus 283 ~~Df~ 287 (292)
+++..
T Consensus 101 P~~~~ 105 (151)
T 3gyz_A 101 KNDYT 105 (151)
T ss_dssp SSCCH
T ss_pred CCCcH
Confidence 87643
No 13
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.07 E-value=3.8e-10 Score=91.54 Aligned_cols=98 Identities=10% Similarity=-0.040 Sum_probs=76.4
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHH
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVAC 260 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Ac 260 (292)
..++++.|.+....++.+++ .|.+.....+.. .-++++|..+++.|+|++|++.|++++.++|++ ..+|+|+|.
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~---~~~~~~lg~ 97 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXE---PRFPFHAAE 97 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---THHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC---chHHHHHHH
Confidence 34455555555555555554 455544444443 344699999999999999999999999999974 457999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 261 CYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 261 cyakLgq~eeALe~LekAIelG~~ 284 (292)
||..+|++++|+.++++|+++..+
T Consensus 98 ~~~~~g~~~~A~~~~~~al~~~p~ 121 (148)
T 2vgx_A 98 CLLQXGELAEAESGLFLAQELIAN 121 (148)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHHHHHHCcC
Confidence 999999999999999999998655
No 14
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.06 E-value=2.9e-10 Score=91.97 Aligned_cols=78 Identities=15% Similarity=0.133 Sum_probs=65.0
Q ss_pred hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 204 NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 204 ~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
.+.+.....+.. ...+.+|..+++.|+|++|++.|+++++++|++ ..+|+|+|.||.++|++++|+.++++||++.
T Consensus 95 ~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 171 (184)
T 3vtx_A 95 ALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGF---IRAYQSIGLAYEGKGLRDEAVKYFKKALEKE 171 (184)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchh---hhHHHHHHHHHHHCCCHHHHHHHHHHHHhCC
Confidence 344444443333 334699999999999999999999999999974 5679999999999999999999999999997
Q ss_pred cc
Q 022783 283 YE 284 (292)
Q Consensus 283 ~~ 284 (292)
.+
T Consensus 172 p~ 173 (184)
T 3vtx_A 172 EK 173 (184)
T ss_dssp HH
T ss_pred cc
Confidence 54
No 15
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.06 E-value=3.9e-10 Score=89.36 Aligned_cols=97 Identities=12% Similarity=0.001 Sum_probs=74.2
Q ss_pred HHhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHH
Q 022783 185 RAERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACC 261 (292)
Q Consensus 185 ~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Acc 261 (292)
.++++.|.+....++.+++ .|.+.....+.. .-++.+|..+++.|+|++|+..|++++.++|++ ..+|+|+|.|
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~lg~~ 95 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINE---PRFPFHAAEC 95 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---THHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC---cHHHHHHHHH
Confidence 3344445444444444443 444444444443 345699999999999999999999999999974 4579999999
Q ss_pred HHhcCCHHHHHHHHHHHHHhCcc
Q 022783 262 YSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 262 yakLgq~eeALe~LekAIelG~~ 284 (292)
|..+|++++|+.++++|+++..+
T Consensus 96 ~~~~g~~~~A~~~~~~al~~~p~ 118 (142)
T 2xcb_A 96 HLQLGDLDGAESGFYSARALAAA 118 (142)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCC
Confidence 99999999999999999998764
No 16
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.04 E-value=1.2e-09 Score=83.76 Aligned_cols=69 Identities=14% Similarity=0.192 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 215 REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 215 ~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
...++++|..+++.|+|++|+..|+++|+++|++ ..+|+|+|.||..+|++++|+.++++|+++..++.
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 72 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED---ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFV 72 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH
Confidence 3456799999999999999999999999999974 56899999999999999999999999999987654
No 17
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.04 E-value=7.9e-10 Score=81.54 Aligned_cols=67 Identities=19% Similarity=0.313 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
..++++|..++..|+|++|++.|+++++++|++ ..+|+|+|.||..+|++++|+.+|++|+++..++
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITAQPQN---PVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 345699999999999999999999999999974 5679999999999999999999999999997765
No 18
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.97 E-value=2.8e-09 Score=81.78 Aligned_cols=67 Identities=18% Similarity=0.179 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
.-.+++|..+++.|+|++|+..|+++++++|++ ..+++|+|.||..+|++++|+..+++|++...++
T Consensus 28 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 94 (117)
T 3k9i_A 28 ECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH---QALRVFYAMVLYNLGRYEQGVELLLKIIAETSDD 94 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 445699999999999999999999999999974 5679999999999999999999999999997654
No 19
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.96 E-value=2.1e-09 Score=81.29 Aligned_cols=65 Identities=11% Similarity=0.172 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
.-.+++|..+++.|+|++|+..|+++++++|++ ..+|+++|.||..+|++++|+..+++|+++..
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETDPDY---VGTYYHLGKLYERLDRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhh
Confidence 345799999999999999999999999999974 45799999999999999999999999998753
No 20
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.95 E-value=1.6e-09 Score=82.18 Aligned_cols=69 Identities=12% Similarity=0.137 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 217 QDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 217 ~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
..+..|..+++.|+|++|+..|++++..+|+......+++++|.||..+|++++|+..++++++...++
T Consensus 41 ~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 41 ALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGS 109 (129)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC
Confidence 456999999999999999999999999999864446789999999999999999999999999986554
No 21
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.94 E-value=7.8e-10 Score=86.80 Aligned_cols=93 Identities=14% Similarity=0.056 Sum_probs=69.5
Q ss_pred HHhhccccchhhHHHHHHHhhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHH
Q 022783 185 RAERNSGVISNRVREIQMQNYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYS 263 (292)
Q Consensus 185 ~a~rN~GvI~~~l~eiqea~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accya 263 (292)
..++..|....++. .|.+.....+.. .-++.+|..+...|++++|+..|++|++++|++ ..+|+++|.||.
T Consensus 25 ~~~~~~g~~~~A~~-----~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~---~~~~~~la~~~~ 96 (121)
T 1hxi_A 25 LSMLKLANLAEAAL-----AFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD---IAVHAALAVSHT 96 (121)
T ss_dssp HHHHHTTCHHHHHH-----HHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHH-----HHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHH
Confidence 34445555544433 444444444443 445699999999999999999999999999974 457999999999
Q ss_pred hcCCHHHHHHHHHHHHHhCccC
Q 022783 264 KLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 264 kLgq~eeALe~LekAIelG~~D 285 (292)
.+|++++|+..+++++++..++
T Consensus 97 ~~g~~~~A~~~~~~al~~~P~~ 118 (121)
T 1hxi_A 97 NEHNANAALASLRAWLLSQPQY 118 (121)
T ss_dssp HHHHHHHHHHHHHHHHC-----
T ss_pred HcCCHHHHHHHHHHHHHhCcCC
Confidence 9999999999999999886543
No 22
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.94 E-value=1.4e-09 Score=111.70 Aligned_cols=98 Identities=13% Similarity=0.076 Sum_probs=66.3
Q ss_pred HhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHH
Q 022783 186 AERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCY 262 (292)
Q Consensus 186 a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accy 262 (292)
++.|.|.+...+++.+++ .|.++.++.+.. .-++++|+.+.++|+|++|++.|++||+++|++ ..+|+|+|.+|
T Consensus 45 a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~---~~a~~~Lg~~~ 121 (723)
T 4gyw_A 45 AHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF---ADAHSNLASIH 121 (723)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHH
Confidence 455666666666666664 555555555443 334577777777777777777777777777753 45677777777
Q ss_pred HhcCCHHHHHHHHHHHHHhCccCh
Q 022783 263 SKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 263 akLgq~eeALe~LekAIelG~~Df 286 (292)
..+|++++|+++|++||++..++.
T Consensus 122 ~~~g~~~eAi~~~~~Al~l~P~~~ 145 (723)
T 4gyw_A 122 KDSGNIPEAIASYRTALKLKPDFP 145 (723)
T ss_dssp HHTTCHHHHHHHHHHHHHHCSCCH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCh
Confidence 777777777777777777766543
No 23
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.94 E-value=2.9e-09 Score=81.51 Aligned_cols=94 Identities=13% Similarity=0.073 Sum_probs=71.7
Q ss_pred hccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHh
Q 022783 188 RNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSK 264 (292)
Q Consensus 188 rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accyak 264 (292)
++.|.+....++.+++ .|.+.....+.. .-++++|..++..|+|++|+..|+++++++|+. ..+|+++|.||..
T Consensus 13 ~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~l~~~~~~ 89 (137)
T 3q49_B 13 KEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS---VKAHFFLGQCQLE 89 (137)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh---HHHHHHHHHHHHH
Confidence 3444444444444443 444444444333 345699999999999999999999999999974 5679999999999
Q ss_pred cCCHHHHHHHHHHHHHhCcc
Q 022783 265 LNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 265 Lgq~eeALe~LekAIelG~~ 284 (292)
+|++++|+.++++|+++..+
T Consensus 90 ~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 90 MESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp TTCHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHChh
Confidence 99999999999999998655
No 24
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.93 E-value=2.4e-09 Score=85.93 Aligned_cols=73 Identities=18% Similarity=0.266 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcC--------CCCc-------cchhHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 022783 215 REQDLREGLQLYRTGKYEVAREKFESVLGS--------KPTP-------EESSVASYNVACCYSKLNQVKAGLSALEDAL 279 (292)
Q Consensus 215 ~~~~~n~G~~L~k~gdYeeAIe~fekALel--------dP~~-------~d~a~a~YN~AccyakLgq~eeALe~LekAI 279 (292)
...++++|+.+++.|+|++|+..|++||.+ +|.. +....+|+|+|.||.++|++++|+.+|++||
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 345669999999999999999999999998 3321 1235689999999999999999999999999
Q ss_pred HhCccChh
Q 022783 280 LAGYEDFK 287 (292)
Q Consensus 280 elG~~Df~ 287 (292)
++...+.+
T Consensus 91 ~~~p~~~~ 98 (162)
T 3rkv_A 91 KREETNEK 98 (162)
T ss_dssp HHSTTCHH
T ss_pred hcCCcchH
Confidence 99876543
No 25
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.93 E-value=1.7e-09 Score=87.42 Aligned_cols=100 Identities=13% Similarity=-0.019 Sum_probs=79.0
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHH
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVAC 260 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Ac 260 (292)
..+.++.|.+.-.+++.+++ .|.+..++.+.. .-++++|..+.+.|+|++|+..|+++|+++|++ ..+|+|+|.
T Consensus 31 ~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~la~ 107 (150)
T 4ga2_A 31 SIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQ---KDLVLKIAE 107 (150)
T ss_dssp HTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCC---HHHHHHHHH
Confidence 34456666666666666665 555555555554 445699999999999999999999999999974 457999999
Q ss_pred HHHhcCCHHHHHHH-HHHHHHhCccCh
Q 022783 261 CYSKLNQVKAGLSA-LEDALLAGYEDF 286 (292)
Q Consensus 261 cyakLgq~eeALe~-LekAIelG~~Df 286 (292)
+|.++|++++|++. +++|+++.+++.
T Consensus 108 ~~~~~~~~~~aa~~~~~~al~l~P~~~ 134 (150)
T 4ga2_A 108 LLCKNDVTDGRAKYWVERAAKLFPGSP 134 (150)
T ss_dssp HHHHHCSSSSHHHHHHHHHHHHSTTCH
T ss_pred HHHHcCChHHHHHHHHHHHHHhCcCCH
Confidence 99999999988776 699999987653
No 26
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.90 E-value=4.4e-09 Score=96.28 Aligned_cols=100 Identities=10% Similarity=0.038 Sum_probs=82.1
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhhHhH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHcCC
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQKERR----------------EQDLREGLQLYRTGKYEVAREKFESVLGSK 245 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~----------------~~~~n~G~~L~k~gdYeeAIe~fekALeld 245 (292)
..++++.|.+.....+.+++ .|.+...+.+.. .-++++|..+++.|+|++|+..|++||+++
T Consensus 147 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 226 (336)
T 1p5q_A 147 STIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELD 226 (336)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 46677788877777777775 555555444433 344699999999999999999999999999
Q ss_pred CCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 246 PTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 246 P~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
|++ ..+|||+|.||..+|++++|+.+|++|+++..++.
T Consensus 227 p~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 264 (336)
T 1p5q_A 227 SNN---EKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNK 264 (336)
T ss_dssp TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH
T ss_pred CCc---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
Confidence 974 56899999999999999999999999999987653
No 27
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.90 E-value=6.4e-09 Score=83.59 Aligned_cols=69 Identities=19% Similarity=0.144 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 215 REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 215 ~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
...++++|..+++.|+|++|++.|+++|+++|++ ..+|+|+|.||..+|++++|+.++++|+++..++.
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 79 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPAN---PIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYS 79 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 3456799999999999999999999999999974 56899999999999999999999999999987654
No 28
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.90 E-value=2.6e-09 Score=109.57 Aligned_cols=99 Identities=17% Similarity=0.109 Sum_probs=73.2
Q ss_pred HHhhccccchhhHHHHHHH--hhHHHHHhhHhHHH-HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHH
Q 022783 185 RAERNSGVISNRVREIQMQ--NYMKKKEQKERREQ-DLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACC 261 (292)
Q Consensus 185 ~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~~~-~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Acc 261 (292)
.++.|.|++...+++.+++ .|.++.++.++..+ .+++|..|.++|+|++|++.|++||+++|++ ..+|+|+|.+
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~---~~a~~nLg~~ 86 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF---ADAYSNMGNT 86 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHH
Confidence 4566777777777777775 55555555554433 4588888888888888888888888888863 4568888888
Q ss_pred HHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 262 YSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 262 yakLgq~eeALe~LekAIelG~~Df 286 (292)
|..+|++++|++++++||++..++.
T Consensus 87 l~~~g~~~~A~~~~~kAl~l~P~~~ 111 (723)
T 4gyw_A 87 LKEMQDVQGALQCYTRAIQINPAFA 111 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 8888888888888888888876543
No 29
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.90 E-value=4.9e-09 Score=77.04 Aligned_cols=66 Identities=23% Similarity=0.279 Sum_probs=60.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhH-HHHHHHHHHHhcCCHHHHHHHHHHHHHhCccChh
Q 022783 219 LREGLQLYRTGKYEVAREKFESVLGSKPTPEESSV-ASYNVACCYSKLNQVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 219 ~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~-a~YN~AccyakLgq~eeALe~LekAIelG~~Df~ 287 (292)
+++|..+++.|+|++|+..|+++++.+|++ .. +|+++|.||..+|++++|+.++++|+++..++..
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~ 70 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVG---KDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPA 70 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSST---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCc---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHH
Confidence 588999999999999999999999999974 45 7999999999999999999999999999876543
No 30
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.90 E-value=6.9e-09 Score=84.08 Aligned_cols=80 Identities=15% Similarity=0.178 Sum_probs=66.7
Q ss_pred hHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 205 YMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 205 Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
|.+...+.+.. ...++.|..+++.|+|++|+..|++++.++|++ ..+|+|+|.||..+|++++|+.+|++|+++..
T Consensus 10 ~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 86 (148)
T 2vgx_A 10 IAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYD---SRFFLGLGACRQAMGQYDLAIHSYSYGAVMDI 86 (148)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCccc---HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 33333334433 345699999999999999999999999999974 56799999999999999999999999999987
Q ss_pred cChh
Q 022783 284 EDFK 287 (292)
Q Consensus 284 ~Df~ 287 (292)
++..
T Consensus 87 ~~~~ 90 (148)
T 2vgx_A 87 XEPR 90 (148)
T ss_dssp TCTH
T ss_pred CCch
Confidence 7643
No 31
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.89 E-value=5.6e-09 Score=87.35 Aligned_cols=98 Identities=12% Similarity=0.138 Sum_probs=76.8
Q ss_pred HhhccccchhhHHHHHHH--hhHHHHHhhH--hHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHH
Q 022783 186 AERNSGVISNRVREIQMQ--NYMKKKEQKE--RREQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACC 261 (292)
Q Consensus 186 a~rN~GvI~~~l~eiqea--~Y~kkk~lk~--~~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Acc 261 (292)
++++.|.+.-..++.+++ .|.+...+.+ .....++.|..++..|+|++|+..|+++++++|+. ..+|+++|.|
T Consensus 9 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~l~~~ 85 (228)
T 4i17_A 9 QLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNL---ANAYIGKSAA 85 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSH---HHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcch---HHHHHHHHHH
Confidence 445555555555555554 4544544443 23445689999999999999999999999999973 5679999999
Q ss_pred HHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 262 YSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 262 yakLgq~eeALe~LekAIelG~~Df 286 (292)
|..+|++++|+..+++|+++..++.
T Consensus 86 ~~~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 86 YRDMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHcccHHHHHHHHHHHHHHCCCcH
Confidence 9999999999999999999987654
No 32
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.89 E-value=3.8e-09 Score=79.27 Aligned_cols=99 Identities=10% Similarity=0.074 Sum_probs=74.2
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhhHh-HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHH
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQKER-REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVAC 260 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~-~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Ac 260 (292)
..++++.|.+....++.+++ .|.+.....+. ..-.++.|..++..|+|++|+..|+++++++|+. ..+|+++|.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~la~ 92 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTF---IKGYTRKAA 92 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc---hHHHHHHHH
Confidence 34444555554444444443 33333333332 2445699999999999999999999999999973 467999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 261 CYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 261 cyakLgq~eeALe~LekAIelG~~D 285 (292)
+|..+|++++|+..+++++++...+
T Consensus 93 ~~~~~~~~~~A~~~~~~~~~~~p~~ 117 (133)
T 2lni_A 93 ALEAMKDYTKAMDVYQKALDLDSSC 117 (133)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHhhHHHHHHHHHHHHHhCCCc
Confidence 9999999999999999999997654
No 33
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.88 E-value=3.8e-09 Score=76.69 Aligned_cols=69 Identities=17% Similarity=0.072 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhc-CCHHHHHHHHHHHHHhCccC
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKL-NQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakL-gq~eeALe~LekAIelG~~D 285 (292)
.-.++.|..++..|+|++|+..|+++++++|+. ....+|+++|.||..+ |++++|+++++++++....+
T Consensus 41 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 41 KYWLMKGKALYNLERYEEAVDCYNYVINVIEDE-YNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCT-TCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCccc-chHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 345699999999999999999999999999971 1356799999999999 99999999999999887643
No 34
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=8.3e-09 Score=79.02 Aligned_cols=94 Identities=9% Similarity=0.043 Sum_probs=72.1
Q ss_pred HHhhccccchhhHHHHHHHhhHHHHHhhHh----HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHH
Q 022783 185 RAERNSGVISNRVREIQMQNYMKKKEQKER----REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVAC 260 (292)
Q Consensus 185 ~a~rN~GvI~~~l~eiqea~Y~kkk~lk~~----~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Ac 260 (292)
...+..|+...++..++ +.....+. ..-+++.|..+++.|+|++|+..|+++++++|++ ..+|+++|.
T Consensus 36 ~~~~~~~~~~~A~~~~~-----~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~~a~ 107 (148)
T 2dba_A 36 NELFKCGDYGGALAAYT-----QALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD---VKALYRRSQ 107 (148)
T ss_dssp HHHHTTTCHHHHHHHHH-----HHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC---HHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHH-----HHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC---HHHHHHHHH
Confidence 34445555554444333 33333332 2345699999999999999999999999999974 567999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 261 CYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 261 cyakLgq~eeALe~LekAIelG~~Df 286 (292)
||..+|++++|+..+++|+++..++.
T Consensus 108 ~~~~~~~~~~A~~~~~~al~~~p~~~ 133 (148)
T 2dba_A 108 ALEKLGRLDQAVLDLQRCVSLEPKNK 133 (148)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCSSCH
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCcH
Confidence 99999999999999999999987653
No 35
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.87 E-value=1.1e-08 Score=79.84 Aligned_cols=100 Identities=14% Similarity=0.054 Sum_probs=78.0
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHH
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVAC 260 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Ac 260 (292)
...+++.|.+....++.+.+ .|.+.....+.. .-.++.|..++..|+|++|+..|+++++++|+. ..+|+++|.
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~~a~ 89 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKY---IKGYYRRAA 89 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc---HHHHHHHHH
Confidence 45556666666555555554 444444433332 445699999999999999999999999999974 567999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 261 CYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 261 cyakLgq~eeALe~LekAIelG~~Df 286 (292)
||..+|++++|+..+++|+++...+.
T Consensus 90 ~~~~~~~~~~A~~~~~~a~~~~p~~~ 115 (166)
T 1a17_A 90 SNMALGKFRAALRDYETVVKVKPHDK 115 (166)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHhccHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999987654
No 36
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.87 E-value=7.1e-09 Score=85.12 Aligned_cols=100 Identities=19% Similarity=0.239 Sum_probs=76.7
Q ss_pred HHhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCcc------------
Q 022783 185 RAERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPE------------ 249 (292)
Q Consensus 185 ~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~------------ 249 (292)
.+.++.|.+...+++.+++ .|.+.....+.. ..++++|..+++.|+|++|++.|++++++.|++.
T Consensus 38 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 117 (213)
T 1hh8_A 38 RICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFK 117 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCE
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccC
Confidence 3556666666666666665 444444443333 4456999999999999999999999999888643
Q ss_pred -chhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 250 -ESSVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 250 -d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
....+|+|+|.||..+|++++|+..+++|+++..+
T Consensus 118 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 153 (213)
T 1hh8_A 118 LFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSE 153 (213)
T ss_dssp EEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS
T ss_pred ccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcc
Confidence 23468999999999999999999999999999765
No 37
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.86 E-value=7.3e-09 Score=75.60 Aligned_cols=68 Identities=16% Similarity=0.085 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
.-.++.|..++..|+|++|+..|+++++++|+. ..+|+++|.+|..+|++++|+..+++++++..++.
T Consensus 39 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~ 106 (118)
T 1elw_A 39 VLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW---GKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNP 106 (118)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhCccc---HHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCH
Confidence 445699999999999999999999999999973 46799999999999999999999999999987653
No 38
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.86 E-value=8.7e-09 Score=86.98 Aligned_cols=64 Identities=17% Similarity=0.116 Sum_probs=59.5
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccChh
Q 022783 221 EGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 221 ~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df~ 287 (292)
+|..+.+.|+|++|+..|+++|+++|++ ..+|+|+|.+|..+|++++|+.++++|+++.+++..
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~ 123 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNN---VDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLA 123 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999999999999999999974 567999999999999999999999999999887543
No 39
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.86 E-value=1.1e-08 Score=84.59 Aligned_cols=100 Identities=13% Similarity=0.055 Sum_probs=77.5
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhhHh-----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHcC
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQKER-----------------REQDLREGLQLYRTGKYEVAREKFESVLGS 244 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~-----------------~~~~~n~G~~L~k~gdYeeAIe~fekALel 244 (292)
...+++.|.+.-..++.+++ .|.+...+.+. ..-.+++|..+++.|+|++|+..|+++|++
T Consensus 38 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 117 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKI 117 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 45666777766666666554 44444332211 133469999999999999999999999999
Q ss_pred CCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 245 KPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 245 dP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
+|+. ..+|+++|.||..+|++++|+..+++|+++..++.
T Consensus 118 ~p~~---~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 156 (198)
T 2fbn_A 118 DKNN---VKALYKLGVANMYFGFLEEAKENLYKAASLNPNNL 156 (198)
T ss_dssp STTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred Cccc---HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 9974 56899999999999999999999999999976653
No 40
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.85 E-value=1.1e-08 Score=80.12 Aligned_cols=68 Identities=19% Similarity=0.229 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccChh
Q 022783 217 QDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 217 ~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df~ 287 (292)
..+++|..+++.|+|++|+..|+++++++|++ ..+|+++|.||..+|++++|+.+|++|+++..++..
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~ 86 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPER---EEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIA 86 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 35789999999999999999999999999974 568999999999999999999999999999887644
No 41
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.85 E-value=1.5e-08 Score=80.20 Aligned_cols=69 Identities=17% Similarity=0.254 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccChh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df~ 287 (292)
...+++|..+++.|+|++|+..|++++.++|++ ..+|+++|.||..+|++++|+.++++|+++..++..
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 87 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCMLDHYD---ARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPR 87 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHhCCcc---HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcH
Confidence 345699999999999999999999999999974 467999999999999999999999999999877543
No 42
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.85 E-value=1.5e-08 Score=94.96 Aligned_cols=99 Identities=19% Similarity=0.173 Sum_probs=76.8
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHH----------------hhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcC
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKE----------------QKERR-EQDLREGLQLYRTGKYEVAREKFESVLGS 244 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~----------------lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALel 244 (292)
..++++.|+.....++.+++ .|.+... +.... .-++++|..++++|+|++|++.|++||++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 34556666666555555554 4444433 22222 33469999999999999999999999999
Q ss_pred CCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 245 KPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 245 dP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
+|++ ..+||++|.||..+|++++|+.+|++|+++..++
T Consensus 303 ~p~~---~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~ 340 (370)
T 1ihg_A 303 DPSN---TKALYRRAQGWQGLKEYDQALADLKKAQEIAPED 340 (370)
T ss_dssp CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred Cchh---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Confidence 9974 5689999999999999999999999999997664
No 43
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.85 E-value=5.5e-09 Score=99.87 Aligned_cols=99 Identities=14% Similarity=0.116 Sum_probs=78.0
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhhHhH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHcCC
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQKERR----------------EQDLREGLQLYRTGKYEVAREKFESVLGSK 245 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~----------------~~~~n~G~~L~k~gdYeeAIe~fekALeld 245 (292)
..++++.|++.....+.+++ .|.++..+.+.. .-++++|..++++|+|++|+..|++||+++
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 347 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLD 347 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 45667777777666666665 555554443332 334599999999999999999999999999
Q ss_pred CCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 246 PTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 246 P~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
|++ ..+|||+|.||..+|++++|+.+|++|+++...+
T Consensus 348 p~~---~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~ 384 (457)
T 1kt0_A 348 SAN---EKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQN 384 (457)
T ss_dssp TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC---
T ss_pred Ccc---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Confidence 974 5689999999999999999999999999997654
No 44
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.85 E-value=3.5e-09 Score=91.00 Aligned_cols=87 Identities=16% Similarity=0.185 Sum_probs=70.6
Q ss_pred hHHHHHH--HhhHHHHHhhHhHHH-HHHHHHHHHHcCCH----------HHHHHHHHHHHcCCCCccchhHHHHHHHHHH
Q 022783 196 RVREIQM--QNYMKKKEQKERREQ-DLREGLQLYRTGKY----------EVAREKFESVLGSKPTPEESSVASYNVACCY 262 (292)
Q Consensus 196 ~l~eiqe--a~Y~kkk~lk~~~~~-~~n~G~~L~k~gdY----------eeAIe~fekALeldP~~~d~a~a~YN~Accy 262 (292)
++..+++ ..|.+.-++.+...+ +++.|.++.+.+++ ++||..|++||+++|+. ..+|||++.+|
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~---~~A~~~LG~ay 90 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKK---DEAVWCIGNAY 90 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTC---HHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCc---HHHHHHHHHHH
Confidence 3344444 367777766666544 45899999988775 59999999999999974 56899999999
Q ss_pred HhcC-----------CHHHHHHHHHHHHHhCccC
Q 022783 263 SKLN-----------QVKAGLSALEDALLAGYED 285 (292)
Q Consensus 263 akLg-----------q~eeALe~LekAIelG~~D 285 (292)
..+| ++++|+.+|++||++..++
T Consensus 91 ~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~ 124 (158)
T 1zu2_A 91 TSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDN 124 (158)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHhcccCcchhhhhccHHHHHHHHHHHHHhCCCC
Confidence 9985 8999999999999998763
No 45
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.84 E-value=1.9e-09 Score=102.00 Aligned_cols=99 Identities=8% Similarity=-0.005 Sum_probs=68.7
Q ss_pred HHhhccccchhhHHH-HHHH--hhHHHHHhhHhHHHH-HHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHH
Q 022783 185 RAERNSGVISNRVRE-IQMQ--NYMKKKEQKERREQD-LREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVAC 260 (292)
Q Consensus 185 ~a~rN~GvI~~~l~e-iqea--~Y~kkk~lk~~~~~~-~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Ac 260 (292)
.+..+.|.+...++. .+++ .|.+...+.++.... +++|.++...|+|++|+..|++||+++|++ ..+|+|++.
T Consensus 132 ~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~---~~a~~~lg~ 208 (382)
T 2h6f_A 132 TVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKN---YHAWQHRQW 208 (382)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTC---HHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccC---HHHHHHHHH
Confidence 445566666666654 5554 555555555544443 477888888888888888888888888863 456888888
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 261 CYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 261 cyakLgq~eeALe~LekAIelG~~Df 286 (292)
||..+|++++|+.++++||++..++.
T Consensus 209 ~~~~~g~~~eAl~~~~~al~l~P~~~ 234 (382)
T 2h6f_A 209 VIQEFKLWDNELQYVDQLLKEDVRNN 234 (382)
T ss_dssp HHHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred HHHHcCChHHHHHHHHHHHHhCCCCH
Confidence 88888888888888888888776654
No 46
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.84 E-value=2.4e-08 Score=71.09 Aligned_cols=68 Identities=24% Similarity=0.322 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
..+++.|..++..|+|++|+..|+++++++|+. ..+|+++|.+|..+|++++|+..+++|+++...+.
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 77 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 77 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCH
Confidence 345689999999999999999999999999974 46799999999999999999999999999976654
No 47
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.83 E-value=2.4e-08 Score=73.92 Aligned_cols=100 Identities=17% Similarity=0.111 Sum_probs=75.1
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhhHh-HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHH
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQKER-REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVAC 260 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~-~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Ac 260 (292)
..++++.|.+....++.+.+ .|.+.....+. ....+..|..++..|+|++|+..|+++++++|+. ..+|+++|.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~~~~ 88 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAY---SKAYGRMGL 88 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHH
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccC---HHHHHHHHH
Confidence 34444555555444444443 34333333332 2445699999999999999999999999999974 457999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 261 CYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 261 cyakLgq~eeALe~LekAIelG~~Df 286 (292)
+|..+|++++|+..+++|+++..++.
T Consensus 89 ~~~~~~~~~~A~~~~~~~~~~~p~~~ 114 (131)
T 2vyi_A 89 ALSSLNKHVEAVAYYKKALELDPDNE 114 (131)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHhCCHHHHHHHHHHHHhcCccch
Confidence 99999999999999999999987653
No 48
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.82 E-value=2e-08 Score=76.80 Aligned_cols=69 Identities=23% Similarity=0.288 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 215 REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 215 ~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
...+++.|..+++.|+|++|+..|++++.++|+. ..+|+|+|.||..+|++++|+.++++|+++..++.
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~ 77 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV---AVYYTNRALCYLKMQQPEQALADCRRALELDGQSV 77 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhH
Confidence 3456799999999999999999999999999974 56899999999999999999999999999987654
No 49
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.81 E-value=1.9e-08 Score=85.44 Aligned_cols=97 Identities=13% Similarity=0.116 Sum_probs=79.8
Q ss_pred HhhccccchhhH-----------HHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccch
Q 022783 186 AERNSGVISNRV-----------REIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEES 251 (292)
Q Consensus 186 a~rN~GvI~~~l-----------~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~ 251 (292)
+.++.|.+...+ ++.+++ .|.+...+.+.. .-.+++|..+...|+|++|+..|+++++++ ++
T Consensus 75 a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~--- 150 (217)
T 2pl2_A 75 GYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DT--- 150 (217)
T ss_dssp HHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CC---
T ss_pred HHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cc---
Confidence 456777777777 777775 666666655554 344699999999999999999999999998 52
Q ss_pred hHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 252 SVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 252 a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
..+|+|+|.+|..+|++++|+..+++|+++.+++.
T Consensus 151 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~ 185 (217)
T 2pl2_A 151 PEIRSALAELYLSMGRLDEALAQYAKALEQAPKDL 185 (217)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 45799999999999999999999999999987654
No 50
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.81 E-value=1e-08 Score=84.23 Aligned_cols=94 Identities=14% Similarity=0.152 Sum_probs=71.4
Q ss_pred hhccccchhhHHHHHHH-hhHHHHHhhHhHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhc
Q 022783 187 ERNSGVISNRVREIQMQ-NYMKKKEQKERREQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKL 265 (292)
Q Consensus 187 ~rN~GvI~~~l~eiqea-~Y~kkk~lk~~~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakL 265 (292)
+++.|.+....++.+++ .++++. +.....-+++.|..+++.|+|++|++.|+++++++|+. ..+|+|+|.+|..+
T Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~a-~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~lg~~~~~~ 84 (213)
T 1hh8_A 9 LWNEGVLAADKKDWKGALDAFSAV-QDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHL---AVAYFQRGMLYYQT 84 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTS-SSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHH-cCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc---hHHHHHHHHHHHHc
Confidence 34445544444444443 222211 23344566799999999999999999999999999974 56799999999999
Q ss_pred CCHHHHHHHHHHHHHhCcc
Q 022783 266 NQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 266 gq~eeALe~LekAIelG~~ 284 (292)
|++++|+.++++|+++..+
T Consensus 85 ~~~~~A~~~~~~al~~~~~ 103 (213)
T 1hh8_A 85 EKYDLAIKDLKEALIQLRG 103 (213)
T ss_dssp TCHHHHHHHHHHHHHTTTT
T ss_pred ccHHHHHHHHHHHHHhCCC
Confidence 9999999999999997654
No 51
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.81 E-value=1.5e-08 Score=81.76 Aligned_cols=97 Identities=16% Similarity=0.116 Sum_probs=65.8
Q ss_pred hhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHH
Q 022783 187 ERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYS 263 (292)
Q Consensus 187 ~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accya 263 (292)
.+|.|.+....++++++ .|.+..++.+.. .-.+++|..+.+.|++++|+..+.+++..+|+. ..++++++.++.
T Consensus 8 y~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~ 84 (184)
T 3vtx_A 8 YMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTS---AEAYYILGSANF 84 (184)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchh---HHHHHHHHHHHH
Confidence 45666666666666664 455544444443 334577777777888888888888887777763 456777788888
Q ss_pred hcCCHHHHHHHHHHHHHhCccCh
Q 022783 264 KLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 264 kLgq~eeALe~LekAIelG~~Df 286 (292)
..++++.|+..+.+|+++...+.
T Consensus 85 ~~~~~~~a~~~~~~a~~~~~~~~ 107 (184)
T 3vtx_A 85 MIDEKQAAIDALQRAIALNTVYA 107 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HcCCHHHHHHHHHHHHHhCccch
Confidence 88888888888888877766554
No 52
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.79 E-value=3.2e-08 Score=75.73 Aligned_cols=71 Identities=28% Similarity=0.400 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
...+..|..+++.|+|++|+..|+++++++|++.+...+|+|+|.||..+|++++|+..|++++++..++.
T Consensus 29 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~ 99 (148)
T 2dba_A 29 EQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDV 99 (148)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCH
Confidence 45568999999999999999999999999997544467899999999999999999999999999976653
No 53
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.79 E-value=1.1e-08 Score=76.01 Aligned_cols=68 Identities=16% Similarity=0.184 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccch----hHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEES----SVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~----a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
.-.++.|..++..|+|++|+..|++++.+.|+.... ..+|+++|.+|..+|++++|+..+++++++..
T Consensus 39 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 110 (131)
T 1elr_A 39 TYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR 110 (131)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 345699999999999999999999999987753111 56899999999999999999999999999875
No 54
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.79 E-value=8.3e-09 Score=87.68 Aligned_cols=94 Identities=13% Similarity=0.005 Sum_probs=73.3
Q ss_pred HhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHc-----------CCHHHHHHHHHHHHcCCCCccch
Q 022783 186 AERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRT-----------GKYEVAREKFESVLGSKPTPEES 251 (292)
Q Consensus 186 a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~-----------gdYeeAIe~fekALeldP~~~d~ 251 (292)
++++.|.+...+++.+++ .|.+...+.+.. ...+++|..+.+. |++++|+..|+++++++|++
T Consensus 41 a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~--- 117 (217)
T 2pl2_A 41 ALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRY--- 117 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTC---
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCccc---
Confidence 344555555555555554 555555555544 3346999999999 99999999999999999974
Q ss_pred hHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 252 SVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 252 a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
..+|+|+|.+|..+|++++|+.++++|+++.
T Consensus 118 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 148 (217)
T 2pl2_A 118 APLHLQRGLVYALLGERDKAEASLKQALALE 148 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcc
Confidence 4679999999999999999999999999987
No 55
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.77 E-value=2.9e-08 Score=75.15 Aligned_cols=65 Identities=18% Similarity=0.113 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
.-.+++|..++..|+|++|+..|+++++++|+. ..+|+++|.||..+|++++|+..+++|+++..
T Consensus 20 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 20 LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY---SVAWKWLGKTLQGQGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 445699999999999999999999999999974 56799999999999999999999999998754
No 56
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.76 E-value=3.5e-08 Score=74.69 Aligned_cols=68 Identities=18% Similarity=0.179 Sum_probs=61.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
.++.|..+++.|+|++|++.|+++++.+|+......+++++|.||..+|++++|+..++++++...++
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~ 72 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTH 72 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCC
Confidence 46899999999999999999999999999864444689999999999999999999999999997665
No 57
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.75 E-value=3.7e-08 Score=72.29 Aligned_cols=68 Identities=24% Similarity=0.322 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
...+..|..+++.|+|++|+..|++++..+|+. ..+|+++|.+|..+|++++|+..+++++++..++.
T Consensus 44 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 111 (125)
T 1na0_A 44 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 111 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH
Confidence 445699999999999999999999999999863 45799999999999999999999999999977653
No 58
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.74 E-value=8.7e-09 Score=97.55 Aligned_cols=98 Identities=9% Similarity=-0.019 Sum_probs=77.0
Q ss_pred hhccccchhhHHHHHHH--hhHHHHHhhHhHHHH-HHHHHHHHHcCC-HHHHHHHHHHHHcCCCCccchhHHHHHHHHHH
Q 022783 187 ERNSGVISNRVREIQMQ--NYMKKKEQKERREQD-LREGLQLYRTGK-YEVAREKFESVLGSKPTPEESSVASYNVACCY 262 (292)
Q Consensus 187 ~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~~~~-~n~G~~L~k~gd-YeeAIe~fekALeldP~~~d~a~a~YN~Accy 262 (292)
+.+.|.+.......+++ .|.+...+.+..... +++|.++.+.|+ |++|+..|++||+++|++ ..+|+|++.+|
T Consensus 100 ~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~---~~a~~~~g~~~ 176 (382)
T 2h6f_A 100 YDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKN---YQVWHHRRVLV 176 (382)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHH
T ss_pred HHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHH
Confidence 33444444443333343 566666666655444 599999999997 999999999999999974 56899999999
Q ss_pred HhcCCHHHHHHHHHHHHHhCccChh
Q 022783 263 SKLNQVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 263 akLgq~eeALe~LekAIelG~~Df~ 287 (292)
..+|++++|+.+|++||++..+++.
T Consensus 177 ~~~g~~~eAl~~~~kal~ldP~~~~ 201 (382)
T 2h6f_A 177 EWLRDPSQELEFIADILNQDAKNYH 201 (382)
T ss_dssp HHHTCCTTHHHHHHHHHHHCTTCHH
T ss_pred HHccCHHHHHHHHHHHHHhCccCHH
Confidence 9999999999999999999887654
No 59
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.73 E-value=2.1e-08 Score=89.24 Aligned_cols=95 Identities=13% Similarity=0.075 Sum_probs=72.9
Q ss_pred hccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHh
Q 022783 188 RNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSK 264 (292)
Q Consensus 188 rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accyak 264 (292)
++.|.+....++.+++ .|.+.....+.. .-++++|..+++.|+|++|+..|++|++++|++ ..+|+|+|.+|..
T Consensus 8 ~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~~ 84 (281)
T 2c2l_A 8 KEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS---VKAHFFLGQCQLE 84 (281)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTC---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHH
Confidence 3344444333444443 454444444433 334699999999999999999999999999974 5689999999999
Q ss_pred cCCHHHHHHHHHHHHHhCccC
Q 022783 265 LNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 265 Lgq~eeALe~LekAIelG~~D 285 (292)
+|++++|+..+++|+++..++
T Consensus 85 ~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 85 MESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp TTCHHHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999987654
No 60
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.72 E-value=8.5e-09 Score=94.65 Aligned_cols=66 Identities=17% Similarity=0.152 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 217 QDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 217 ~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
-++++|..++++|+|++|+..|+++|+++|++ ..+|||+|.+|..+|++++|+.+|++|+++..++
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~---~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~ 297 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEKN---PKALFRRGKAKAELGQMDSARDDFRKAQKYAPDD 297 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC
Confidence 34699999999999999999999999999974 5689999999999999999999999999886553
No 61
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.72 E-value=7.6e-08 Score=72.03 Aligned_cols=68 Identities=19% Similarity=0.303 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
..++++|..+++.|+|++|+..|+++++.+|++ ..+|+++|.||..+|++++|+..+++|+++...+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~ 84 (133)
T 2lni_A 17 LMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD---AKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFI 84 (133)
T ss_dssp HHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC---HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCch
Confidence 456799999999999999999999999999974 56799999999999999999999999999977653
No 62
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.70 E-value=4.4e-08 Score=94.59 Aligned_cols=99 Identities=14% Similarity=0.065 Sum_probs=81.8
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHH
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVAC 260 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Ac 260 (292)
-.++++.|.+....++.+++ .|.++..+.+.. ..+.++|..+++.|+|++|++.|++|++++|+. ..+|+|+|.
T Consensus 6 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~---~~~~~~lg~ 82 (477)
T 1wao_1 6 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKY---IKGYYRRAA 82 (477)
T ss_dssp HTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---HHHHHHHHH
Confidence 35567778777777777775 555555555443 445699999999999999999999999999974 568999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 261 CYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 261 cyakLgq~eeALe~LekAIelG~~D 285 (292)
+|..+|++++|++.+++|+++..++
T Consensus 83 ~~~~~g~~~eA~~~~~~al~~~p~~ 107 (477)
T 1wao_1 83 SNMALGKFRAALRDYETVVKVKPHD 107 (477)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999997664
No 63
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.70 E-value=8.7e-08 Score=69.80 Aligned_cols=68 Identities=12% Similarity=0.060 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
...+..|..++..|+|++|+..|++++..+|++ ..+|+++|.||..+|++++|+..+++++++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~ 72 (118)
T 1elw_A 5 NELKEKGNKALSVGNIDDALQCYSEAIKLDPHN---HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWG 72 (118)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc---HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccH
Confidence 456799999999999999999999999999974 45799999999999999999999999999976643
No 64
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.69 E-value=3.3e-08 Score=82.62 Aligned_cols=64 Identities=3% Similarity=-0.039 Sum_probs=29.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHcCCCCccch----hHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 220 REGLQLYRTGKYEVAREKFESVLGSKPTPEES----SVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 220 n~G~~L~k~gdYeeAIe~fekALeldP~~~d~----a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
++|..+++.|+|++|++.|+++++++|++... ..+|+++|.++..+|++++|++.+++|+++..
T Consensus 81 ~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 148 (228)
T 4i17_A 81 GKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTS 148 (228)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCC
Confidence 44444444555555555555555444442110 12344445555555555555555555444433
No 65
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.69 E-value=6.4e-08 Score=81.29 Aligned_cols=100 Identities=19% Similarity=0.154 Sum_probs=77.8
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHH
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVAC 260 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Ac 260 (292)
..++++.|.+....++.+++ .|.+.....+.. ..++++|..++..|+|++|++.|+++++++|+. ..+|+++|.
T Consensus 43 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~---~~~~~~la~ 119 (275)
T 1xnf_A 43 AQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTY---NYAHLNRGI 119 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---THHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccc---cHHHHHHHH
Confidence 45556666666666666665 444444443332 445699999999999999999999999999974 467999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 261 CYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 261 cyakLgq~eeALe~LekAIelG~~Df 286 (292)
||..+|++++|+..+++++++..++.
T Consensus 120 ~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 120 ALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 99999999999999999999987654
No 66
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.68 E-value=5.1e-08 Score=70.62 Aligned_cols=64 Identities=16% Similarity=0.179 Sum_probs=58.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
.+.+|..++..|+|++|+..|+++++++|+. ..+|+++|.+|..+|++++|+..+++|+++...
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQLDPEE---SKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCcCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 3588999999999999999999999999974 457999999999999999999999999999766
No 67
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.67 E-value=1.7e-07 Score=77.39 Aligned_cols=71 Identities=18% Similarity=0.228 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccch-------------hHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEES-------------SVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~-------------a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
...++.|..+++.|+|++|+..|++++++.|+..+. ..+|+|+|.||..+|++++|+.+|++|+++.
T Consensus 39 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 118 (198)
T 2fbn_A 39 FDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKID 118 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 445699999999999999999999999998874310 2689999999999999999999999999997
Q ss_pred ccCh
Q 022783 283 YEDF 286 (292)
Q Consensus 283 ~~Df 286 (292)
.++.
T Consensus 119 p~~~ 122 (198)
T 2fbn_A 119 KNNV 122 (198)
T ss_dssp TTCH
T ss_pred cccH
Confidence 6643
No 68
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.66 E-value=4.1e-08 Score=84.21 Aligned_cols=70 Identities=16% Similarity=0.244 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHh--------cCCHHHHHHHHHHHHHhCccC
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSK--------LNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accyak--------Lgq~eeALe~LekAIelG~~D 285 (292)
...+.+|..+++.|+|++|+..|+++|.+.|+......+||++|.||.. +|++++|+..++++++...++
T Consensus 53 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~ 130 (261)
T 3qky_A 53 DAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNH 130 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCc
Confidence 3457999999999999999999999999999766667789999999999 999999999999999987653
No 69
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.63 E-value=3.9e-07 Score=75.25 Aligned_cols=65 Identities=14% Similarity=0.179 Sum_probs=46.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
.++.|..++..|+|++|+..|+++++++|+. ..+|+++|.+|..+|++++|+..+++|+++..++
T Consensus 142 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 206 (258)
T 3uq3_A 142 ARLEGKEYFTKSDWPNAVKAYTEMIKRAPED---ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF 206 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCccc---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHH
Confidence 3477777777777777777777777777753 3467777777777777777777777777776543
No 70
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.62 E-value=1e-07 Score=76.79 Aligned_cols=95 Identities=8% Similarity=-0.011 Sum_probs=71.8
Q ss_pred hccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHH-HHHcCCH--HHHHHHHHHHHcCCCCccchhHHHHHHHHH
Q 022783 188 RNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQ-LYRTGKY--EVAREKFESVLGSKPTPEESSVASYNVACC 261 (292)
Q Consensus 188 rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~-L~k~gdY--eeAIe~fekALeldP~~~d~a~a~YN~Acc 261 (292)
++.|.+....++..++ .|.+...+.+.. .-.++.|.. ++..|+| ++|+..|+++++++|++ ..+|+++|.+
T Consensus 48 ~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~la~~ 124 (177)
T 2e2e_A 48 ALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNE---ITALMLLASD 124 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTC---HHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCc---HHHHHHHHHH
Confidence 3444444444444443 444444443333 345699999 7799999 99999999999999974 4679999999
Q ss_pred HHhcCCHHHHHHHHHHHHHhCccC
Q 022783 262 YSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 262 yakLgq~eeALe~LekAIelG~~D 285 (292)
|..+|++++|+..+++|+++..++
T Consensus 125 ~~~~g~~~~A~~~~~~al~~~p~~ 148 (177)
T 2e2e_A 125 AFMQANYAQAIELWQKVMDLNSPR 148 (177)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCCTT
T ss_pred HHHcccHHHHHHHHHHHHhhCCCC
Confidence 999999999999999999998765
No 71
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.61 E-value=1.2e-07 Score=71.82 Aligned_cols=81 Identities=20% Similarity=0.418 Sum_probs=61.5
Q ss_pred cceEEEEecC----CceeEEeeeC-CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccC
Q 022783 84 YEEYEVEIEQ----PYGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV 158 (292)
Q Consensus 84 ~~~~~v~l~K----PlGl~~~~~~-~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~ 158 (292)
++.++|+|.| ++|+.+..+. +.+++|..|.|+|.|+++|.+++||+|+++... .+ ......++...++...
T Consensus 3 ~~~~~v~l~k~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~---~v-~~~~~~~~~~~~~~~~ 78 (92)
T 2qg1_A 3 SDTLTIGLQKKPGKGLGLSIVGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGE---DV-RNATQEAVAALLKCSL 78 (92)
T ss_dssp -CEEEEEEECCTTSCCSEEEECCSSSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTE---EC-TTCCHHHHHHHHHHCC
T ss_pred ceEEEEEEEeCCCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHHcCC
Confidence 4678899987 4899997764 459999999999999999999999999997642 11 1112345666777666
Q ss_pred CceEEEEeec
Q 022783 159 GPLLMKMQKR 168 (292)
Q Consensus 159 g~v~l~l~r~ 168 (292)
+++.|++.|+
T Consensus 79 ~~v~l~v~R~ 88 (92)
T 2qg1_A 79 GTVTLEVGRI 88 (92)
T ss_dssp SEEEEEEECC
T ss_pred CeEEEEEEcc
Confidence 7899999885
No 72
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.61 E-value=1.2e-07 Score=78.26 Aligned_cols=95 Identities=12% Similarity=0.054 Sum_probs=73.9
Q ss_pred HHhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHH
Q 022783 185 RAERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACC 261 (292)
Q Consensus 185 ~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Acc 261 (292)
.+..+.|.+....++.+++ .|.+.....+.. .-.++.|..+++.|+|++|+..|+++++++|+. ..+|+++|.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~---~~~~~~l~~~ 216 (258)
T 3uq3_A 140 EEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF---VRAYIRKATA 216 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHH---HHHHHHHHHH
Confidence 3444555555555555554 444444443333 345699999999999999999999999999974 5679999999
Q ss_pred HHhcCCHHHHHHHHHHHHHhC
Q 022783 262 YSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 262 yakLgq~eeALe~LekAIelG 282 (292)
|..+|++++|+..+++|+++.
T Consensus 217 ~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 217 QIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHhC
Confidence 999999999999999999997
No 73
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.60 E-value=3e-07 Score=67.87 Aligned_cols=68 Identities=22% Similarity=0.233 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
...+..|..++..|+|++|+..|++++..+|+. ..+|+++|.||..+|++++|+..+++++++..++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~ 80 (131)
T 2vyi_A 13 ERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN---AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYS 80 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCH
Confidence 445699999999999999999999999999973 56799999999999999999999999999976653
No 74
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.60 E-value=2.2e-07 Score=68.88 Aligned_cols=66 Identities=18% Similarity=0.222 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
..++..|..++..|+|++|+..|++++..+|+. ..+|+++|.+|..+|++++|+..+++++++..+
T Consensus 5 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 70 (131)
T 1elr_A 5 LKEKELGNDAYKKKDFDTALKHYDKAKELDPTN---MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE 70 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc---HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc
Confidence 445689999999999999999999999999973 567999999999999999999999999998654
No 75
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.60 E-value=1.4e-07 Score=86.28 Aligned_cols=71 Identities=18% Similarity=0.250 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccc------------hhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEE------------SSVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d------------~a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
..++++|+.+++.|+|++|+..|++||+++|+..+ ...+|+|+|.||.++|++++|+.+|++||++..
T Consensus 148 ~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p 227 (336)
T 1p5q_A 148 TIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDS 227 (336)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 44569999999999999999999999999997420 146899999999999999999999999999987
Q ss_pred cCh
Q 022783 284 EDF 286 (292)
Q Consensus 284 ~Df 286 (292)
++.
T Consensus 228 ~~~ 230 (336)
T 1p5q_A 228 NNE 230 (336)
T ss_dssp TCH
T ss_pred CcH
Confidence 654
No 76
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.59 E-value=2.9e-07 Score=71.67 Aligned_cols=69 Identities=13% Similarity=0.141 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 215 REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 215 ~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
...++++|..++..|+|++|+..|+++++++|++ ..+|+++|.||..+|++++|+..+++|+++...+.
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~ 81 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYI 81 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccH
Confidence 3456799999999999999999999999999974 56799999999999999999999999999976643
No 77
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.58 E-value=4e-07 Score=76.41 Aligned_cols=68 Identities=15% Similarity=0.147 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
..++.+|..++..|+|++|+..|+++++++|+. ..+|+++|.+|..+|++++|+..+++|+++...+.
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~ 111 (275)
T 1xnf_A 44 QLLYERGVLYDSLGLRALARNDFSQALAIRPDM---PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYN 111 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcccc
Confidence 445699999999999999999999999999974 56799999999999999999999999999976543
No 78
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.58 E-value=1.3e-07 Score=90.40 Aligned_cols=71 Identities=20% Similarity=0.224 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccc------------hhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEE------------SSVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d------------~a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
..++++|+.+++.|+|++|+..|++||+++|+... ...+|+|+|.||.++|++++|+.+|++||++..
T Consensus 269 ~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p 348 (457)
T 1kt0_A 269 AIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDS 348 (457)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Confidence 44569999999999999999999999999997420 146899999999999999999999999999987
Q ss_pred cCh
Q 022783 284 EDF 286 (292)
Q Consensus 284 ~Df 286 (292)
++.
T Consensus 349 ~~~ 351 (457)
T 1kt0_A 349 ANE 351 (457)
T ss_dssp TCH
T ss_pred ccH
Confidence 654
No 79
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.58 E-value=2.4e-07 Score=79.31 Aligned_cols=70 Identities=21% Similarity=0.265 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 215 REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 215 ~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
....+++|..+++.|+|++|+..|+++++.+|+......+||++|.||..+|++++|+..+++++++..+
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~ 84 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQI 84 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCC
Confidence 3566899999999999999999999999999986555678999999999999999999999999999654
No 80
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.58 E-value=2.2e-07 Score=70.99 Aligned_cols=82 Identities=18% Similarity=0.299 Sum_probs=61.8
Q ss_pred cceEEEEecCC-----ceeEEeeeC-CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhcc
Q 022783 84 YEEYEVEIEQP-----YGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR 157 (292)
Q Consensus 84 ~~~~~v~l~KP-----lGl~~~~~~-~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r 157 (292)
++.++|+|.|+ +|+.+.... +.+++|..|.|+|.|+++|.|++||+|+.+... .+ .....-.+...++..
T Consensus 2 ~~~~~v~l~k~~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~---~v-~~~~~~~~~~~~~~~ 77 (95)
T 2vwr_A 2 MEILQVALHKRDSGEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGH---DL-KYGTPELAAQIIQAS 77 (95)
T ss_dssp EEEEEEEEECSSTTCCCCEEEEECSSSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTE---EC-TTCCHHHHHHHHHHC
T ss_pred cEEEEEEEEECCCCCcccEEEEeccCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHHcC
Confidence 36788999873 899997664 459999999999999999999999999997631 11 111234555666655
Q ss_pred CCceEEEEeecc
Q 022783 158 VGPLLMKMQKRY 169 (292)
Q Consensus 158 ~g~v~l~l~r~~ 169 (292)
..++.|.+.|.-
T Consensus 78 g~~v~l~v~R~~ 89 (95)
T 2vwr_A 78 GERVNLTIARPG 89 (95)
T ss_dssp CSEEEEEEEEES
T ss_pred CCEEEEEEEcCC
Confidence 678899998853
No 81
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.58 E-value=1.3e-07 Score=83.77 Aligned_cols=100 Identities=12% Similarity=0.030 Sum_probs=72.4
Q ss_pred HHhhccccchhhH-HHHHHH--hhHHHHHhhHhH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccch---
Q 022783 185 RAERNSGVISNRV-REIQMQ--NYMKKKEQKERR-------EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEES--- 251 (292)
Q Consensus 185 ~a~rN~GvI~~~l-~eiqea--~Y~kkk~lk~~~-------~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~--- 251 (292)
.++.|.|.+.... .+..++ .|.++..+.+.. .-..+.|..+.+.|+|++|+..|+++++++|++...
T Consensus 118 ~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 197 (292)
T 1qqe_A 118 NFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWS 197 (292)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGG
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHH
Confidence 4556667666653 555554 555555443321 224588999999999999999999999999875332
Q ss_pred -hHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 252 -SVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 252 -a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
..+|+|++.||..+|++++|+.+|++|+++...
T Consensus 198 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~ 231 (292)
T 1qqe_A 198 LKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPN 231 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC---
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 236899999999999999999999999877543
No 82
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.57 E-value=1.7e-07 Score=79.04 Aligned_cols=69 Identities=13% Similarity=0.123 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHH----------------HHHHHHhcCCHHHHHHHHHHHH
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYN----------------VACCYSKLNQVKAGLSALEDAL 279 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN----------------~AccyakLgq~eeALe~LekAI 279 (292)
...+.+|..+++.|+|++|+..|+++++++|++ ..+|++ +|.||..+|++++|+.++++|+
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 81 (208)
T 3urz_A 5 DEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDR---TEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELL 81 (208)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHH---HHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC---hHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 456799999999999999999999999999963 456888 9999999999999999999999
Q ss_pred HhCccChh
Q 022783 280 LAGYEDFK 287 (292)
Q Consensus 280 elG~~Df~ 287 (292)
++.+++..
T Consensus 82 ~~~p~~~~ 89 (208)
T 3urz_A 82 QKAPNNVD 89 (208)
T ss_dssp HHCTTCHH
T ss_pred HHCCCCHH
Confidence 99887654
No 83
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.57 E-value=9e-08 Score=84.90 Aligned_cols=95 Identities=18% Similarity=0.161 Sum_probs=69.0
Q ss_pred hhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHH
Q 022783 187 ERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYS 263 (292)
Q Consensus 187 ~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accya 263 (292)
+.+.|.+...+++..++ .|.+.....+.. ..+.++|..+.+.|+|++|+..|+++++++|+. ..+|+|+|.+|.
T Consensus 216 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~l~~~~~ 292 (365)
T 4eqf_A 216 QTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGF---IRSRYNLGISCI 292 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc---hHHHHHHHHHHH
Confidence 44555555555555554 444444433332 344588888888999999999999999888863 557889999999
Q ss_pred hcCCHHHHHHHHHHHHHhCcc
Q 022783 264 KLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 264 kLgq~eeALe~LekAIelG~~ 284 (292)
.+|++++|+..+++|+++..+
T Consensus 293 ~~g~~~~A~~~~~~al~~~~~ 313 (365)
T 4eqf_A 293 NLGAYREAVSNFLTALSLQRK 313 (365)
T ss_dssp HHTCCHHHHHHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHHHHHHhCcc
Confidence 999999999999999887654
No 84
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.57 E-value=1.2e-07 Score=83.92 Aligned_cols=102 Identities=8% Similarity=-0.113 Sum_probs=77.9
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhhHh-------HHHHHHHHHHHHHc-CCHHHHHHHHHHHHcCCCCccc---
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQKER-------REQDLREGLQLYRT-GKYEVAREKFESVLGSKPTPEE--- 250 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~-------~~~~~n~G~~L~k~-gdYeeAIe~fekALeldP~~~d--- 250 (292)
..++.|.|.+...+.+.+++ .|.++..+... .....+.|..+... |+|++|+.+|++||++.|+..+
T Consensus 77 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~ 156 (292)
T 1qqe_A 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVAL 156 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHH
Confidence 45667777777777666665 45555444332 12345999999996 9999999999999998875322
Q ss_pred hhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 251 SSVASYNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 251 ~a~a~YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
...+|+|+|.+|..+|++++|+..+++|+++..++
T Consensus 157 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 191 (292)
T 1qqe_A 157 SNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC
Confidence 24579999999999999999999999999987553
No 85
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.57 E-value=2.5e-07 Score=82.00 Aligned_cols=92 Identities=12% Similarity=0.117 Sum_probs=71.2
Q ss_pred ccchhhHHHHHHH--hhHHHHHhhHh---HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhc
Q 022783 191 GVISNRVREIQMQ--NYMKKKEQKER---REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKL 265 (292)
Q Consensus 191 GvI~~~l~eiqea--~Y~kkk~lk~~---~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakL 265 (292)
|.+...+++..++ .|.+.....+. ....+++|..+.+.|+|++|++.|+++++++|+. ..+|+|+|.+|..+
T Consensus 184 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~l~~~~~~~ 260 (365)
T 4eqf_A 184 SKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPED---YSLWNRLGATLANG 260 (365)
T ss_dssp -----CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHT
T ss_pred HHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHc
Confidence 5555556666664 44444444433 3445699999999999999999999999999974 56899999999999
Q ss_pred CCHHHHHHHHHHHHHhCccC
Q 022783 266 NQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 266 gq~eeALe~LekAIelG~~D 285 (292)
|++++|+..+++|+++..++
T Consensus 261 g~~~~A~~~~~~al~~~p~~ 280 (365)
T 4eqf_A 261 DRSEEAVEAYTRALEIQPGF 280 (365)
T ss_dssp TCHHHHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHHHHHHhcCCCc
Confidence 99999999999999997664
No 86
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.55 E-value=1.1e-07 Score=91.08 Aligned_cols=102 Identities=8% Similarity=-0.080 Sum_probs=81.2
Q ss_pred HHhhccccchhhH---------HHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHc--------CCHHHHHHHHHHHHcC
Q 022783 185 RAERNSGVISNRV---------REIQMQ--NYMKKKEQKERR-EQDLREGLQLYRT--------GKYEVAREKFESVLGS 244 (292)
Q Consensus 185 ~a~rN~GvI~~~l---------~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~--------gdYeeAIe~fekALel 244 (292)
.++.+.|.+...+ ++.+++ .|.+...+.+.. ..++++|..+... |+|++|+..|++|+++
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 250 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV 250 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh
Confidence 4556677777766 777775 565555555543 4456999999999 9999999999999999
Q ss_pred CCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 245 KPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 245 dP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
+|...+...+|+|+|.||..+|++++|++++++|+++..++.
T Consensus 251 ~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 292 (474)
T 4abn_A 251 DRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWP 292 (474)
T ss_dssp CGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 992212356899999999999999999999999999987654
No 87
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.55 E-value=2.1e-07 Score=71.77 Aligned_cols=71 Identities=13% Similarity=0.052 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCC----ccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 215 REQDLREGLQLYRTGKYEVAREKFESVLGSKPT----PEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 215 ~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~----~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
..+++..|..+++.++|+.|+.+|++|+...+. ......+++++|.||.++|++++|+..+++|+++.+++
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~ 79 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEH 79 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC
Confidence 457899999999999999999999999964311 11345689999999999999999999999999998775
No 88
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.54 E-value=2.5e-07 Score=78.55 Aligned_cols=70 Identities=13% Similarity=0.133 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
...+++|..+++.|+|++|+..|+++++..|+......+++++|.||..+|++++|+..+++++++..++
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~ 74 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH 74 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCC
Confidence 4567999999999999999999999999999764455689999999999999999999999999997665
No 89
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.54 E-value=3.6e-07 Score=67.16 Aligned_cols=63 Identities=24% Similarity=0.328 Sum_probs=43.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
.+..|..++..|+|++|+..|++++...|+. ..+|+++|.+|..+|++++|+..++++++...
T Consensus 72 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 134 (136)
T 2fo7_A 72 WYNLGNAYYKQGDYDEAIEYYQKALELDPRS---AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 134 (136)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---hHHHHHHHHHHHHHccHHHHHHHHHHHHccCC
Confidence 3466777777777777777777777766652 34577777777777777777777777776643
No 90
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.54 E-value=2.4e-07 Score=72.22 Aligned_cols=66 Identities=20% Similarity=0.345 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 217 QDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 217 ~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
-.+..|..+++.|+|++|++.|+++++.+|+. ..+|+++|.+|..+|++++|+..+++++++..++
T Consensus 112 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 177 (186)
T 3as5_A 112 VRFRLGVALDNLGRFDEAIDSFKIALGLRPNE---GKVHRAIAFSYEQMGRHEEALPHFKKANELDEGA 177 (186)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHhcCccc---hHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 34577888888888888888888888887753 4568888888888888888888888888776543
No 91
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.53 E-value=1.3e-07 Score=83.21 Aligned_cols=97 Identities=12% Similarity=0.083 Sum_probs=68.7
Q ss_pred HHhhccccchhhHHHHHHH-hhHHHHHh------hHhH---HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCcc---ch
Q 022783 185 RAERNSGVISNRVREIQMQ-NYMKKKEQ------KERR---EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPE---ES 251 (292)
Q Consensus 185 ~a~rN~GvI~~~l~eiqea-~Y~kkk~l------k~~~---~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~---d~ 251 (292)
.++.|.|.+...+.+.+++ .|+++... .... .-.++.|..+++.|+|++|++.|++||++.++.. ..
T Consensus 156 ~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~ 235 (293)
T 3u3w_A 156 YIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALI 235 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHH
Confidence 3556666666665555554 33322221 1111 2335999999999999999999999997765431 23
Q ss_pred hHHHHHHHHHHHhcCC-HHHHHHHHHHHHHh
Q 022783 252 SVASYNVACCYSKLNQ-VKAGLSALEDALLA 281 (292)
Q Consensus 252 a~a~YN~AccyakLgq-~eeALe~LekAIel 281 (292)
+.+|+|+|.||.++|+ +++|++.+++|+++
T Consensus 236 ~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 236 GQLYYQRGECLRKLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 6789999999999995 69999999999876
No 92
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.53 E-value=4e-07 Score=66.96 Aligned_cols=68 Identities=24% Similarity=0.314 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
...+..|..+...|++++|+..|++++..+|+. ..+|+++|.+|..+|++++|+..++++++....+.
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 103 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS---AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA 103 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc---hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh
Confidence 345688999999999999999999999999863 45799999999999999999999999999876643
No 93
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.52 E-value=3.6e-07 Score=70.43 Aligned_cols=84 Identities=14% Similarity=0.259 Sum_probs=62.8
Q ss_pred ccccceEEEEecC----CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc
Q 022783 81 EEKYEEYEVEIEQ----PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (292)
Q Consensus 81 ~~~~~~~~v~l~K----PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~ 156 (292)
+..++.++|+|.| .||+.+.. .+.+++|..|.|+|.|+++|.|++||+|+++.. ..+-. ...-.+...++.
T Consensus 4 ~~~~~~~~v~l~~~~~~glG~~~~~-~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing---~~v~~-~~~~~~~~~~~~ 78 (96)
T 2qkv_A 4 RNSLEKFNVDLMKKAGKELGLSLSP-NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNG---DALEG-LPFQVSYALFKG 78 (96)
T ss_dssp CCCCCCEEEEEECBTTBCCCEEEEE-CSSSEEEEEECTTSCHHHHHHCCTTCEEEEETT---EECTT-CCHHHHHHHHHT
T ss_pred hHHCceEEEEEEeCCCCCccEEEEe-CCCcEEEEEeCCCChHHhcCCCCCCCEEEEECC---EECCC-CCHHHHHHHHhc
Confidence 3456778999964 68888776 456899999999999999999999999999763 22211 113345566776
Q ss_pred cCCceEEEEeecc
Q 022783 157 RVGPLLMKMQKRY 169 (292)
Q Consensus 157 r~g~v~l~l~r~~ 169 (292)
..+++.|++.|+.
T Consensus 79 ~~~~v~l~v~R~~ 91 (96)
T 2qkv_A 79 ANGKVSMEVTRPK 91 (96)
T ss_dssp CSSEEEEEEECCC
T ss_pred CCCcEEEEEEeCC
Confidence 6788999999863
No 94
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.52 E-value=3.5e-07 Score=70.17 Aligned_cols=81 Identities=21% Similarity=0.458 Sum_probs=62.3
Q ss_pred ceEEEEecC---CceeEEeeeCC--CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCC
Q 022783 85 EEYEVEIEQ---PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVG 159 (292)
Q Consensus 85 ~~~~v~l~K---PlGl~~~~~~~--G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g 159 (292)
+.++|+|.| ++|+.+....+ ++++|..|.|++.|+++|.|++||+|+++-. ..+- ...+.++...|+....
T Consensus 5 ~~~~v~l~~~~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng---~~v~-~~~~~~~~~~l~~~g~ 80 (97)
T 1n7e_A 5 IIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINS---SSLK-GKPLSEAIHLLQMAGE 80 (97)
T ss_dssp CEEEEEEECTTSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETT---EECT-TCCHHHHHHHHHTCCS
T ss_pred eEEEEEEEeCCCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECC---EECC-CCCHHHHHHHHHcCCC
Confidence 678999987 78899977654 6999999999999999999999999999763 2221 1124566677775456
Q ss_pred ceEEEEeecc
Q 022783 160 PLLMKMQKRY 169 (292)
Q Consensus 160 ~v~l~l~r~~ 169 (292)
++.|.+.|.-
T Consensus 81 ~v~l~v~R~~ 90 (97)
T 1n7e_A 81 TVTLKIKKQT 90 (97)
T ss_dssp EEEEEEECCC
T ss_pred eEEEEEEeCC
Confidence 7889998853
No 95
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.52 E-value=2.4e-07 Score=82.36 Aligned_cols=69 Identities=25% Similarity=0.306 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccChh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df~ 287 (292)
...+++|+.+++.|+|++|+..|+++|+++|++ ..+|+|+|.||..+|++++|+.++++|+++..++..
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~ 73 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAITRNPLV---AVYYTNRALCYLKMQQPEQALADCRRALELDGQSVK 73 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHH
Confidence 345699999999999999999999999999974 568999999999999999999999999999876543
No 96
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.52 E-value=2.2e-07 Score=89.49 Aligned_cols=96 Identities=10% Similarity=-0.035 Sum_probs=57.7
Q ss_pred hhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHH
Q 022783 187 ERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYS 263 (292)
Q Consensus 187 ~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accya 263 (292)
+++.|.+....++.+++ .|.+...+.+.. .-.+++|..+.+.|+|++|++.|+++++++|++ ..+|+|+|.||.
T Consensus 26 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~la~~~~ 102 (568)
T 2vsy_A 26 WLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEH---PGIALWLGHALE 102 (568)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHH
Confidence 34444444444444443 333333333332 233477777777777777777777777777753 345777777777
Q ss_pred hcCCHHHHHHHHHHHHHhCccC
Q 022783 264 KLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 264 kLgq~eeALe~LekAIelG~~D 285 (292)
.+|++++|++.+++|+++..++
T Consensus 103 ~~g~~~~A~~~~~~al~~~p~~ 124 (568)
T 2vsy_A 103 DAGQAEAAAAAYTRAHQLLPEE 124 (568)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTC
T ss_pred HcCCHHHHHHHHHHHHHhCCCC
Confidence 7777777777777777766543
No 97
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.52 E-value=1e-07 Score=83.85 Aligned_cols=98 Identities=14% Similarity=0.121 Sum_probs=69.2
Q ss_pred HHHhhccccchhhHHHHHHH-hhH-HHHHh-hH---h---H-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCcc---c
Q 022783 184 IRAERNSGVISNRVREIQMQ-NYM-KKKEQ-KE---R---R-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPE---E 250 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea-~Y~-kkk~l-k~---~---~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~---d 250 (292)
..++.|.|.+...+++.+++ .|+ ++... +. . . .-.++.|..+++.|+|++|++.|++||++.++.. .
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~ 234 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMAL 234 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHH
Confidence 45666777777776666665 333 33211 10 0 1 2345999999999999999999999997654311 2
Q ss_pred hhHHHHHHHHHHHhcCCHHHH-HHHHHHHHHh
Q 022783 251 SSVASYNVACCYSKLNQVKAG-LSALEDALLA 281 (292)
Q Consensus 251 ~a~a~YN~AccyakLgq~eeA-Le~LekAIel 281 (292)
.+.+|+|+|.||..+|++++| ...+++|+++
T Consensus 235 ~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~ 266 (293)
T 2qfc_A 235 IGQLYYQRGECLRKLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 367899999999999999999 7779999766
No 98
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.52 E-value=5.4e-07 Score=68.34 Aligned_cols=65 Identities=15% Similarity=0.156 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCc---cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 217 QDLREGLQLYRTGKYEVAREKFESVLGSKPTP---EESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 217 ~~~n~G~~L~k~gdYeeAIe~fekALeldP~~---~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
...+.|..++..|+|++|++.|++++++.+.. .....+++|+|.+|..+|++++|+..+++|+++
T Consensus 51 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 51 AYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 118 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34588888899999999999999988654432 223567889999999999999999999988876
No 99
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.51 E-value=3.3e-07 Score=83.69 Aligned_cols=100 Identities=18% Similarity=0.025 Sum_probs=75.8
Q ss_pred HHhhccccchhhHHHHHHH--hhHHHHHhhHhHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHH
Q 022783 185 RAERNSGVISNRVREIQMQ--NYMKKKEQKERREQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCY 262 (292)
Q Consensus 185 ~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accy 262 (292)
.++++.|...-..++..++ .|.+.....+....++++|..+++.|+|++|+..|+++++++|++ ..+|+++|.||
T Consensus 7 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~l~~~~ 83 (514)
T 2gw1_A 7 LALKDKGNQFFRNKKYDDAIKYYNWALELKEDPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDY---SKVLLRRASAN 83 (514)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCC---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhcCccHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHH---HHHHHHHHHHH
Confidence 3444444444444444443 444444444444556799999999999999999999999999974 46799999999
Q ss_pred HhcCCHHHHHHHHHHHHHhCccChh
Q 022783 263 SKLNQVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 263 akLgq~eeALe~LekAIelG~~Df~ 287 (292)
..+|++++|+..++++++++..+..
T Consensus 84 ~~~g~~~~A~~~~~~~~~~~~~~~~ 108 (514)
T 2gw1_A 84 EGLGKFADAMFDLSVLSLNGDFNDA 108 (514)
T ss_dssp HHTTCHHHHHHHHHHHHHSSSCCGG
T ss_pred HHHhhHHHHHHHHHHHHhcCCCccc
Confidence 9999999999999999999865433
No 100
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.50 E-value=2.1e-07 Score=81.72 Aligned_cols=95 Identities=16% Similarity=0.121 Sum_probs=62.6
Q ss_pred hccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHh
Q 022783 188 RNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSK 264 (292)
Q Consensus 188 rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accyak 264 (292)
.+.|.+....++.+++ .|.+.....+.. ....++|..+.+.|+|++|+..|+++++++|+. ..+|+++|.+|..
T Consensus 221 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~l~~~~~~ 297 (368)
T 1fch_A 221 CGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGY---IRSRYNLGISCIN 297 (368)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---HHHHHHHHHHHHH
Confidence 3344444444444443 333333333332 334578888888888888888888888888753 4568888888888
Q ss_pred cCCHHHHHHHHHHHHHhCccC
Q 022783 265 LNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 265 Lgq~eeALe~LekAIelG~~D 285 (292)
+|++++|+..+++|+++..++
T Consensus 298 ~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 298 LGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HTCHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHhCCCC
Confidence 888888888888888776544
No 101
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.50 E-value=7e-07 Score=75.75 Aligned_cols=69 Identities=9% Similarity=0.069 Sum_probs=62.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccChh
Q 022783 219 LREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 219 ~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df~ 287 (292)
+..|..+++.|+|++|+..|+++|+..|+......+++++|.||.++|++++|++.+++++..+.++-+
T Consensus 151 ~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~~~~ 219 (225)
T 2yhc_A 151 YSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNTLE 219 (225)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSCCCC
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCCchh
Confidence 588999999999999999999999999986555678999999999999999999999999998877544
No 102
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.50 E-value=3.1e-07 Score=72.19 Aligned_cols=78 Identities=18% Similarity=0.354 Sum_probs=60.0
Q ss_pred EEEEecC----CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceE
Q 022783 87 YEVEIEQ----PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (292)
Q Consensus 87 ~~v~l~K----PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~ 162 (292)
..|+|.| +||+.+....+++++|..|.|++.|+++|.|++||+|+.+.. ..+. ...+.++...|+...+++.
T Consensus 14 ~~v~l~K~~~~~lG~~l~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING---~~v~-~~~~~~~~~~l~~~~~~v~ 89 (97)
T 2ejy_A 14 RLIQFEKVTEEPMGICLKLNEKQSCTVARILHGGMIHRQGSLHVGDEILEING---TNVT-NHSVDQLQKAMKETKGMIS 89 (97)
T ss_dssp EEEEEEECSSSCCSEEEEECTTCCEEEEEECSSSHHHHHTCCCTTCEEEEETT---BCCC-SSCSHHHHHHHHHCCEEEE
T ss_pred EEEEEEeCCCCCeeEEEEeCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECC---EECC-CCCHHHHHHHHHcCCCeEE
Confidence 3566655 899999877778999999999999999999999999999863 2221 1135566777776677888
Q ss_pred EEEeec
Q 022783 163 MKMQKR 168 (292)
Q Consensus 163 l~l~r~ 168 (292)
|++.+.
T Consensus 90 L~V~~~ 95 (97)
T 2ejy_A 90 LKVIPN 95 (97)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 888764
No 103
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.49 E-value=2.9e-07 Score=77.62 Aligned_cols=96 Identities=15% Similarity=0.172 Sum_probs=64.2
Q ss_pred hhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHH-HHH
Q 022783 187 ERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVA-CCY 262 (292)
Q Consensus 187 ~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~A-ccy 262 (292)
+.+.|.+...+++.+++ .|.+.....+.. ....+.|..++..|+|++|++.|+++++++|+. ..+|+|+| ++|
T Consensus 77 ~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~---~~~~~~l~~~~~ 153 (272)
T 3u4t_A 77 FEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTD---PKVFYELGQAYY 153 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCC---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCc---HHHHHHHHHHHH
Confidence 34444444444444444 333333333332 344588888888888888888888888888863 45688888 666
Q ss_pred HhcCCHHHHHHHHHHHHHhCccCh
Q 022783 263 SKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 263 akLgq~eeALe~LekAIelG~~Df 286 (292)
... ++++|+..+++|+++..++.
T Consensus 154 ~~~-~~~~A~~~~~~a~~~~p~~~ 176 (272)
T 3u4t_A 154 YNK-EYVKADSSFVKVLELKPNIY 176 (272)
T ss_dssp HTT-CHHHHHHHHHHHHHHSTTCH
T ss_pred HHH-HHHHHHHHHHHHHHhCccch
Confidence 664 88888888888888876643
No 104
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.49 E-value=5.6e-07 Score=74.87 Aligned_cols=66 Identities=14% Similarity=0.023 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCC-----CCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSK-----PTPEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeld-----P~~~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
....++|..+...|+|++|++.|++++.+. |+.+....+|+|+|.+|..+|++++|+..+++|+++
T Consensus 86 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 86 ATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344699999999999999999999999872 333355678999999999999999999999999988
No 105
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.49 E-value=5e-07 Score=70.42 Aligned_cols=67 Identities=15% Similarity=0.205 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
.-.+..|..++..|+|++|++.|++++..+|+. ..+|+++|.+|..+|++++|+..++++++...++
T Consensus 77 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 143 (186)
T 3as5_A 77 KVATVLGLTYVQVQKYDLAVPLLIKVAEANPIN---FNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNE 143 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHh---HHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccc
Confidence 345689999999999999999999999999863 4679999999999999999999999999987654
No 106
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.49 E-value=6e-07 Score=72.59 Aligned_cols=64 Identities=22% Similarity=0.211 Sum_probs=32.5
Q ss_pred HHHHHHHHHc-CCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 219 LREGLQLYRT-GKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 219 ~n~G~~L~k~-gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
+..|..++.. |+|++|+..|+++++ .|..+....+|+++|.+|..+|++++|+..++++++...
T Consensus 80 ~~l~~~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 144 (225)
T 2vq2_A 80 NNYGWFLCGRLNRPAESMAYFDKALA-DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQP 144 (225)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHHHT-STTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHc-CcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3555555555 555555555555555 222112234455555555555555555555555555543
No 107
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.48 E-value=1.1e-06 Score=68.25 Aligned_cols=79 Identities=20% Similarity=0.382 Sum_probs=59.0
Q ss_pred EEEEecC----CceeEEeeeCCC----CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc--
Q 022783 87 YEVEIEQ----PYGLKFAKGRDG----GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-- 156 (292)
Q Consensus 87 ~~v~l~K----PlGl~~~~~~~G----~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~-- 156 (292)
.+|++.| +||+.+.....| +++|..|.+++.|+++|.|++||+|+++. |..+ ....+.++...|+.
T Consensus 11 ~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~In---g~~v-~~~~~~~~~~~l~~~~ 86 (101)
T 2yt7_A 11 REVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAIN---GTSL-VGLPLAACQAAVRETK 86 (101)
T ss_dssp EEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEES---SCBC-TTSCHHHHHHHHHHTT
T ss_pred EEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEEC---CEEC-CCCCHHHHHHHHHhCC
Confidence 4455543 799999865545 79999999999999977799999999976 3333 11345567778876
Q ss_pred cCCceEEEEeecc
Q 022783 157 RVGPLLMKMQKRY 169 (292)
Q Consensus 157 r~g~v~l~l~r~~ 169 (292)
...+|.|++.|..
T Consensus 87 ~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 87 SQTSVTLSIVHCP 99 (101)
T ss_dssp TSSEEEEEECCCC
T ss_pred CCCeEEEEEEeCC
Confidence 4567899998865
No 108
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.48 E-value=5.6e-07 Score=74.86 Aligned_cols=98 Identities=16% Similarity=0.144 Sum_probs=73.1
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHh---------hHhHHHHHHHHHHHHHcCCHHHHHHHHHHHHcC-----CCC
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQ---------KERREQDLREGLQLYRTGKYEVAREKFESVLGS-----KPT 247 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~l---------k~~~~~~~n~G~~L~k~gdYeeAIe~fekALel-----dP~ 247 (292)
..++.+.|.+...+.+.+++ .|.+.... ........++|..++..|+|++|+..|++++++ .++
T Consensus 85 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 164 (283)
T 3edt_B 85 AATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPD 164 (283)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 44556666666666666664 33333333 112234469999999999999999999999987 222
Q ss_pred ccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 248 PEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 248 ~~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
.+....+++|+|.+|..+|++++|+..+++++++
T Consensus 165 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 165 DPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 2245678999999999999999999999999987
No 109
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.48 E-value=7.4e-07 Score=67.57 Aligned_cols=97 Identities=16% Similarity=0.080 Sum_probs=70.0
Q ss_pred HHhhccccchhhHHHHHHH--hhHHHHHhhHh-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCC---ccchh
Q 022783 185 RAERNSGVISNRVREIQMQ--NYMKKKEQKER-------REQDLREGLQLYRTGKYEVAREKFESVLGSKPT---PEESS 252 (292)
Q Consensus 185 ~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~-------~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~---~~d~a 252 (292)
.++.+.|.+...+.+..++ .|.+....... .....+.|..++..|+|++|++.|++++++.+. .....
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 4555566665555555554 33333222221 233469999999999999999999999965332 22346
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 253 VASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 253 ~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
.+++++|.+|..+|++++|++.+++|+++
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 158 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEI 158 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 78999999999999999999999999987
No 110
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.47 E-value=4.9e-07 Score=69.09 Aligned_cols=80 Identities=20% Similarity=0.373 Sum_probs=63.5
Q ss_pred ceEEEEecC---CceeEEeeeC------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccc--hhhHHHH
Q 022783 85 EEYEVEIEQ---PYGLKFAKGR------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGRTMYT 153 (292)
Q Consensus 85 ~~~~v~l~K---PlGl~~~~~~------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~--~g~~~~a 153 (292)
+.++|+|.| ++|+.+..+. +.+++|..|.|++.|+++|.|++||+|+++.. . +... +.++..+
T Consensus 3 ~~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing---~---~v~~~~~~~~~~~ 76 (97)
T 2jil_A 3 RTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDG---I---RLLGTTHAEAMSI 76 (97)
T ss_dssp EEEEEEEECBTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETT---E---ECSSCCHHHHHHH
T ss_pred eEEEEEEEeCCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECC---E---ECCCCCHHHHHHH
Confidence 467888887 6899998764 35999999999999999999999999999763 1 2223 5667778
Q ss_pred hhccCCceEEEEeeccC
Q 022783 154 IRQRVGPLLMKMQKRYG 170 (292)
Q Consensus 154 i~~r~g~v~l~l~r~~~ 170 (292)
|+....++.|.+.|...
T Consensus 77 l~~~g~~v~l~v~R~~~ 93 (97)
T 2jil_A 77 LKQCGQEAALLIEYDVS 93 (97)
T ss_dssp HHHSCSEEEEEEEEECC
T ss_pred HHcCCCeEEEEEEeCCC
Confidence 87766678999999654
No 111
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.46 E-value=1.1e-06 Score=68.54 Aligned_cols=83 Identities=22% Similarity=0.443 Sum_probs=64.9
Q ss_pred ccceEEEEec---CCceeEEeeeC--------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHH
Q 022783 83 KYEEYEVEIE---QPYGLKFAKGR--------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTM 151 (292)
Q Consensus 83 ~~~~~~v~l~---KPlGl~~~~~~--------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~ 151 (292)
..+.++|+|. +++|+.+..+. +.+++|..|.+++.|+++|.|++||+|+++.. ..+ ....+.++.
T Consensus 5 ~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng---~~v-~~~~~~~~~ 80 (105)
T 1wha_A 5 SSGRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSING---VDV-TEARHDHAV 80 (105)
T ss_dssp CCEEEEEEECCCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESS---CBC-TTCCHHHHH
T ss_pred CCeeEEEEEEeCCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECC---EEC-CCCCHHHHH
Confidence 4577888885 56899998754 35999999999999999999999999999763 111 112256777
Q ss_pred HHhhccCCceEEEEeecc
Q 022783 152 YTIRQRVGPLLMKMQKRY 169 (292)
Q Consensus 152 ~ai~~r~g~v~l~l~r~~ 169 (292)
..|+.....+.|++.|..
T Consensus 81 ~~l~~~g~~v~l~v~R~~ 98 (105)
T 1wha_A 81 SLLTAASPTIALLLEREA 98 (105)
T ss_dssp HHHTSCCSCEEEEEEECC
T ss_pred HHHHcCCCeEEEEEEECC
Confidence 888876778999999975
No 112
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.45 E-value=2.8e-07 Score=79.06 Aligned_cols=67 Identities=9% Similarity=0.120 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHHHH----cCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHh----cCCHHHHHHHHHHHHHhCccC
Q 022783 214 RREQDLREGLQLYR----TGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSK----LNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 214 ~~~~~~n~G~~L~k----~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accyak----Lgq~eeALe~LekAIelG~~D 285 (292)
.....+++|..+.. .++|++|+++|+++++.+| ..+++|+|.+|.. .+++++|++.+++|+++|+++
T Consensus 181 ~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~-----~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~ 255 (273)
T 1ouv_A 181 DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN-----GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKG 255 (273)
T ss_dssp CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHH
T ss_pred CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC-----HHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHH
Confidence 34556788888888 8888899988888888876 3468888999888 888999999999998888764
No 113
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.45 E-value=1.1e-06 Score=64.29 Aligned_cols=68 Identities=24% Similarity=0.322 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
..++..|..++..|+|++|++.|++++..+|+. ..+|+++|.+|..+|++++|+..++++++...++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 77 (125)
T 1na0_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 77 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccH
Confidence 345689999999999999999999999999863 45799999999999999999999999999876543
No 114
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.45 E-value=6.6e-07 Score=67.78 Aligned_cols=81 Identities=19% Similarity=0.438 Sum_probs=61.7
Q ss_pred cceEEEEecCC---ceeEEeeeC------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHh
Q 022783 84 YEEYEVEIEQP---YGLKFAKGR------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (292)
Q Consensus 84 ~~~~~v~l~KP---lGl~~~~~~------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai 154 (292)
.+.++|+|.|+ ||+.+.... +++++|..|.+++.|+++|.|++||+|+++... .+ ....+.++...+
T Consensus 3 ~~~~~v~l~~~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~---~v-~~~~~~~~~~~~ 78 (97)
T 2iwn_A 3 SETFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGT---NL-QGFTNQQAVEVL 78 (97)
T ss_dssp EEEEEEEEECBTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTE---EC-TTSCHHHHHHHH
T ss_pred cEEEEEEEecCCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCE---EC-CCCCHHHHHHHH
Confidence 46788999887 999998762 469999999999999999989999999998742 11 111234556677
Q ss_pred hccCCceEEEEeec
Q 022783 155 RQRVGPLLMKMQKR 168 (292)
Q Consensus 155 ~~r~g~v~l~l~r~ 168 (292)
+....++.|++.|.
T Consensus 79 ~~~~~~v~l~v~r~ 92 (97)
T 2iwn_A 79 RHTGQTVLLTLMRR 92 (97)
T ss_dssp HTCCSEEEEEEEEE
T ss_pred HcCCCeEEEEEEeC
Confidence 76566789998874
No 115
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.45 E-value=9.2e-07 Score=69.96 Aligned_cols=80 Identities=15% Similarity=0.258 Sum_probs=60.9
Q ss_pred ceEEEEec----CCceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCc
Q 022783 85 EEYEVEIE----QPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGP 160 (292)
Q Consensus 85 ~~~~v~l~----KPlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~ 160 (292)
+.++|+|. ..+|+.+.. .+.+++|..|.|+|.|+++|.|++||+|+++.. ..+-.. ..-.+...++...++
T Consensus 2 ~~~~v~L~k~~~~glG~~i~~-~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing---~~v~~~-~~~~~~~~~~~~~~~ 76 (106)
T 2la8_A 2 EKFNVDLMKKAGKELGLSLSP-NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNG---DALEGL-PFQVCYALFKGANGK 76 (106)
T ss_dssp EEEEEEECCBSSSTTCCEEEE-CSSSEEEEECCTTSCHHHHTTCCTTCEEEEESS---CBCSSS-CHHHHHHHHHSCBSC
T ss_pred eEEEEEEEeCCCCccCEEEEe-CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECC---EECCCC-CHHHHHHHHhCCCCe
Confidence 56788887 468888876 456899999999999999999999999998763 222111 233455677777788
Q ss_pred eEEEEeecc
Q 022783 161 LLMKMQKRY 169 (292)
Q Consensus 161 v~l~l~r~~ 169 (292)
|.|.+.|+.
T Consensus 77 v~l~v~R~~ 85 (106)
T 2la8_A 77 VSMEVTRPK 85 (106)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEeCC
Confidence 999999963
No 116
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.45 E-value=9.8e-07 Score=67.52 Aligned_cols=84 Identities=23% Similarity=0.381 Sum_probs=63.2
Q ss_pred ceEEEEecC---CceeEEeeeCC---CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccC
Q 022783 85 EEYEVEIEQ---PYGLKFAKGRD---GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV 158 (292)
Q Consensus 85 ~~~~v~l~K---PlGl~~~~~~~---G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~ 158 (292)
++++|+|.| ++|+.+..+.+ ++++|..|.+++.|+++|.|++||+|+++... .+ ....+.+++..++...
T Consensus 4 ~~~~v~l~~~~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~---~v-~~~~~~~~~~~~~~~~ 79 (98)
T 2opg_A 4 CETTIEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGI---DL-RKATHDEAINVLRQTP 79 (98)
T ss_dssp EEEEEEEECBTTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTE---EC-TTCCHHHHHHHHHTCC
T ss_pred CEEEEEEEECCCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHHhCC
Confidence 457777765 68999987765 79999999999999999999999999997631 11 1112446667777666
Q ss_pred CceEEEEeeccCCc
Q 022783 159 GPLLMKMQKRYGKM 172 (292)
Q Consensus 159 g~v~l~l~r~~~~~ 172 (292)
.++.|++.|.-...
T Consensus 80 ~~v~l~v~R~~~~~ 93 (98)
T 2opg_A 80 QRVRLTLYRDEAPY 93 (98)
T ss_dssp SEEEEEEEECSSCC
T ss_pred CeEEEEEEcCCCCC
Confidence 88999998865443
No 117
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.45 E-value=9.1e-07 Score=76.19 Aligned_cols=66 Identities=18% Similarity=0.013 Sum_probs=59.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
.+.+|..+.+.|+|++|+..|+++++++|+. ..+|+++|.+|..+|++++|+..+++|+++..++.
T Consensus 275 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~ 340 (359)
T 3ieg_A 275 KERICHCFSKDEKPVEAIRICSEVLQMEPDN---VNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQ 340 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCccc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 3478999999999999999999999999974 56799999999999999999999999999987643
No 118
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.44 E-value=1.3e-06 Score=76.61 Aligned_cols=94 Identities=14% Similarity=0.130 Sum_probs=73.2
Q ss_pred ccccchhhHHHHHHH--hhHHHHHhhHh---HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHH
Q 022783 189 NSGVISNRVREIQMQ--NYMKKKEQKER---REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYS 263 (292)
Q Consensus 189 N~GvI~~~l~eiqea--~Y~kkk~lk~~---~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accya 263 (292)
+.|.+. ..+..+++ .|.+.....+. ....+++|..+.+.|+|++|+..|+++++++|+. ..+|+++|.+|.
T Consensus 187 ~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~l~~~~~ 262 (368)
T 1fch_A 187 ILGSLL-SDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPND---YLLWNKLGATLA 262 (368)
T ss_dssp TTHHHH-HHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHH
T ss_pred HHHHHh-hcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC---HHHHHHHHHHHH
Confidence 344444 44555554 44444444444 2445699999999999999999999999999974 467999999999
Q ss_pred hcCCHHHHHHHHHHHHHhCccCh
Q 022783 264 KLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 264 kLgq~eeALe~LekAIelG~~Df 286 (292)
.+|++++|+..+++|+++..++.
T Consensus 263 ~~g~~~~A~~~~~~al~~~~~~~ 285 (368)
T 1fch_A 263 NGNQSEEAVAAYRRALELQPGYI 285 (368)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HcCCHHHHHHHHHHHHHhCCCcH
Confidence 99999999999999999976543
No 119
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.44 E-value=1.7e-06 Score=70.38 Aligned_cols=84 Identities=15% Similarity=0.273 Sum_probs=64.3
Q ss_pred cccceEEEEecC---CceeEEeeeCC-----CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHH
Q 022783 82 EKYEEYEVEIEQ---PYGLKFAKGRD-----GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYT 153 (292)
Q Consensus 82 ~~~~~~~v~l~K---PlGl~~~~~~~-----G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~a 153 (292)
...+.++|+|.| +||+.+..+.+ .++||..|.+++.|+++|.|++||+|+.+-.. .+- ...+.++...
T Consensus 26 ~~~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~---~v~-~~~~~~~~~~ 101 (130)
T 1i16_A 26 AEATVCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGT---AMQ-GLTRFEAWNI 101 (130)
T ss_dssp SSEEEEEEEEETTSSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSC---BGG-GSCHHHHHHH
T ss_pred CCCcEEEEEEEcCCCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---ECC-CCCHHHHHHH
Confidence 345667888877 89999987655 48999999999999999669999999998632 221 1135677888
Q ss_pred hhccCC-ceEEEEeecc
Q 022783 154 IRQRVG-PLLMKMQKRY 169 (292)
Q Consensus 154 i~~r~g-~v~l~l~r~~ 169 (292)
|+...+ +|.|+++|.-
T Consensus 102 l~~~~~~~v~l~v~r~~ 118 (130)
T 1i16_A 102 IKALPDGPVTIVIRRKS 118 (130)
T ss_dssp HHTSCSSEEEEEEEEES
T ss_pred HHhCCCceEEEEEEeCC
Confidence 887654 5999999873
No 120
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.44 E-value=2.7e-07 Score=79.10 Aligned_cols=68 Identities=15% Similarity=0.051 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
..+++.|..+.+.|+|++|+..|+++++++|+. ..+|+++|.||..+|++++|++.+++|+++..++.
T Consensus 237 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 304 (330)
T 3hym_B 237 PLLNNLGHVCRKLKKYAEALDYHRQALVLIPQN---ASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDT 304 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---SHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccc---hHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCch
Confidence 455699999999999999999999999999973 45799999999999999999999999999987654
No 121
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.44 E-value=6.7e-07 Score=81.68 Aligned_cols=69 Identities=22% Similarity=0.224 Sum_probs=62.9
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 214 RREQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 214 ~~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
....++.+|..+++.|+|++|+..|++++..+|+ ..+|+++|.||..+|++++|+.+|++|+++..++.
T Consensus 5 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~----~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 73 (514)
T 2gw1_A 5 YALALKDKGNQFFRNKKYDDAIKYYNWALELKED----PVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYS 73 (514)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCH
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc----HHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHH
Confidence 3456779999999999999999999999999995 46899999999999999999999999999987754
No 122
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.43 E-value=3e-07 Score=84.92 Aligned_cols=95 Identities=18% Similarity=0.053 Sum_probs=58.9
Q ss_pred HHhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHH
Q 022783 185 RAERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACC 261 (292)
Q Consensus 185 ~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Acc 261 (292)
.++++.|...-..+++.++ .|.+.....+.. .-++++|..+++.|+|++|+..|+++++++|++ ..+|+++|.|
T Consensus 26 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~la~~ 102 (537)
T 3fp2_A 26 VQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDH---SKALLRRASA 102 (537)
T ss_dssp HHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCch---HHHHHHHHHH
Confidence 4445555544444444443 444444433333 334578888888888888888888888887763 4567888888
Q ss_pred HHhcCCHHHHHHHHHHHHHhCc
Q 022783 262 YSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 262 yakLgq~eeALe~LekAIelG~ 283 (292)
|..+|++++|+..++ ++.+..
T Consensus 103 ~~~~g~~~~A~~~~~-~~~~~~ 123 (537)
T 3fp2_A 103 NESLGNFTDAMFDLS-VLSLNG 123 (537)
T ss_dssp HHHHTCHHHHHHHHH-HHC---
T ss_pred HHHcCCHHHHHHHHH-HHhcCC
Confidence 888888888888884 665543
No 123
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.43 E-value=7.8e-07 Score=78.21 Aligned_cols=66 Identities=17% Similarity=0.098 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH---cCCCCccch-hHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 217 QDLREGLQLYRTGKYEVAREKFESVL---GSKPTPEES-SVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 217 ~~~n~G~~L~k~gdYeeAIe~fekAL---eldP~~~d~-a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
-..+.|..++..|+|++|+..|++|+ +..|+.... ..+++|+|.+|..+|++++|+..+++|+++.
T Consensus 157 ~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 157 IENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34599999999999999999999999 445543222 2689999999999999999999999998874
No 124
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.43 E-value=5.8e-07 Score=80.56 Aligned_cols=65 Identities=15% Similarity=0.132 Sum_probs=45.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
..++|..+++.|++++|++.|+++++++|+. ..+|+|+|.+|..+|++++|++.+++|+++..++
T Consensus 240 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 304 (388)
T 1w3b_A 240 HGNLACVYYEQGLIDLAIDTYRRAIELQPHF---PDAYCNLANALKEKGSVAEAEDCYNTALRLCPTH 304 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCSSC---HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccc
Confidence 3467777777777777777777777777753 3457777777777777777777777777765543
No 125
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.43 E-value=8.3e-07 Score=73.07 Aligned_cols=98 Identities=21% Similarity=0.162 Sum_probs=71.2
Q ss_pred HhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHH
Q 022783 186 AERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCY 262 (292)
Q Consensus 186 a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accy 262 (292)
++.+.|.+....++.+++ .|.+.....+.. ...+..|..+...|+|++|++.|+++++++|+. ..+|+++|.+|
T Consensus 59 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~~a~~~ 135 (243)
T 2q7f_A 59 PYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMEN---GDLFYMLGTVL 135 (243)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCS---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC---HHHHHHHHHHH
Confidence 444455555555555554 333333333322 444688999999999999999999999998864 45799999999
Q ss_pred HhcCCHHHHHHHHHHHHHhCccCh
Q 022783 263 SKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 263 akLgq~eeALe~LekAIelG~~Df 286 (292)
..+|++++|+..++++++...++.
T Consensus 136 ~~~~~~~~A~~~~~~~~~~~~~~~ 159 (243)
T 2q7f_A 136 VKLEQPKLALPYLQRAVELNENDT 159 (243)
T ss_dssp HHTSCHHHHHHHHHHHHHHCTTCH
T ss_pred HHhccHHHHHHHHHHHHHhCCccH
Confidence 999999999999999999876543
No 126
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.43 E-value=8.1e-07 Score=68.55 Aligned_cols=83 Identities=22% Similarity=0.407 Sum_probs=61.4
Q ss_pred cccceEEEEecC---CceeEEeeeCCC-CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhcc
Q 022783 82 EKYEEYEVEIEQ---PYGLKFAKGRDG-GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR 157 (292)
Q Consensus 82 ~~~~~~~v~l~K---PlGl~~~~~~~G-~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r 157 (292)
.+.+..+|+|.| ++|+.+..+.++ +++|..|.|++.|+++|.|++||+|+++.. ..+ .....-.+...++..
T Consensus 8 ~~~~~~~v~l~k~~~glG~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng---~~v-~~~~~~~~~~~~~~~ 83 (104)
T 3i4w_A 8 IPREPRRIVIHRGSTGLGFNIVGGEXGEGIFISFILAGGPADLSGELRKGDQILSVNG---VDL-RNASHEQAAIALKNA 83 (104)
T ss_dssp CCSSCEEEEEECBTTBTSEEEEECC-CCCEEEEEECTTSHHHHHCCCCTTEEEEEETT---EEC-TTCCHHHHHHHHHTS
T ss_pred CCCccEEEEEEeCCCccCEEEECCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHHcC
Confidence 344556777766 789999887666 999999999999999999999999999763 333 111223455566666
Q ss_pred CCceEEEEeec
Q 022783 158 VGPLLMKMQKR 168 (292)
Q Consensus 158 ~g~v~l~l~r~ 168 (292)
..++.|.+.|.
T Consensus 84 ~~~v~l~v~r~ 94 (104)
T 3i4w_A 84 GQTVTIIAQYK 94 (104)
T ss_dssp CSEEEEEEEEC
T ss_pred CCeEEEEEEEC
Confidence 67889999884
No 127
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.43 E-value=9e-07 Score=71.49 Aligned_cols=86 Identities=20% Similarity=0.371 Sum_probs=64.7
Q ss_pred ccccccceEEEEecC----CceeEEeeeC-----CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhh
Q 022783 79 EQEEKYEEYEVEIEQ----PYGLKFAKGR-----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR 149 (292)
Q Consensus 79 ~~~~~~~~~~v~l~K----PlGl~~~~~~-----~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~ 149 (292)
.+-.+.....|+|.| +||+.+..+. +.+++|..|.++|.|+++|.|++||+|+.+.. ..+ ......+
T Consensus 18 ~~~~~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg---~~v-~~~~~~~ 93 (118)
T 3b76_A 18 LYFQSMHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDG---VEL-TEVSRSE 93 (118)
T ss_dssp CCCEEEEEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETT---EEG-GGSCHHH
T ss_pred cccCCCCcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECC---EEC-CCCCHHH
Confidence 344455566677744 5899998764 34899999999999999999999999999763 211 2224557
Q ss_pred HHHHhhccCCceEEEEeec
Q 022783 150 TMYTIRQRVGPLLMKMQKR 168 (292)
Q Consensus 150 ~~~ai~~r~g~v~l~l~r~ 168 (292)
+..+|+...+.|.|++.|.
T Consensus 94 ~~~~l~~~~~~v~L~v~R~ 112 (118)
T 3b76_A 94 AVALLKRTSSSIVLKALEV 112 (118)
T ss_dssp HHHHHHSCCSEEEEEEEEE
T ss_pred HHHHHHcCCCeEEEEEEEC
Confidence 7888887788899999885
No 128
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.43 E-value=5.2e-07 Score=76.04 Aligned_cols=62 Identities=10% Similarity=0.130 Sum_probs=34.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 219 LREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 219 ~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
+.+|..+...|+|++|++.|+++++++|+. ..+|+++|.+|..+|++++|+..+++|+++..
T Consensus 78 ~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~ 139 (272)
T 3u4t_A 78 EYYGKILMKKGQDSLAIQQYQAAVDRDTTR---LDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTT 139 (272)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---THHHHHHHHHHHHTTCHHHHHHHHGGGCCSSC
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhcCccc---HHHHHHHHHHHHHccCHHHHHHHHHHHhhcCC
Confidence 455555555555555555555555555542 23455555555555555555555555555533
No 129
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.42 E-value=9.5e-07 Score=72.71 Aligned_cols=95 Identities=9% Similarity=0.060 Sum_probs=70.8
Q ss_pred ccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhc
Q 022783 189 NSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKL 265 (292)
Q Consensus 189 N~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakL 265 (292)
+.|.+...+++.+++ .|.+.....+.. ...+..|..+.+.|+|++|+..|+++++++|+. ..+++++|.+|..+
T Consensus 96 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~l~~~~~~~ 172 (243)
T 2q7f_A 96 GAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEND---TEARFQFGMCLANE 172 (243)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc---HHHHHHHHHHHHHc
Confidence 344444444444443 333333333322 445689999999999999999999999999963 45799999999999
Q ss_pred CCHHHHHHHHHHHHHhCccCh
Q 022783 266 NQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 266 gq~eeALe~LekAIelG~~Df 286 (292)
|++++|+..++++++...++.
T Consensus 173 ~~~~~A~~~~~~~~~~~~~~~ 193 (243)
T 2q7f_A 173 GMLDEALSQFAAVTEQDPGHA 193 (243)
T ss_dssp TCCHHHHHHHHHHHHHCTTCH
T ss_pred CCHHHHHHHHHHHHHhCcccH
Confidence 999999999999999976543
No 130
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.42 E-value=7.2e-08 Score=96.77 Aligned_cols=96 Identities=11% Similarity=0.048 Sum_probs=52.2
Q ss_pred HHhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHH
Q 022783 185 RAERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACC 261 (292)
Q Consensus 185 ~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Acc 261 (292)
.++++.|.+...+++.+++ .|.+..++.+.. .-++++|..+++.|+|++|++.|++||+++|++ ..+|+|+|.|
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~---~~~~~~lg~~ 510 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGE---LAPKLALAAT 510 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC---SHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---hHHHHHHHHH
Confidence 3444455555444444443 444444433333 334577777777777777777777777777753 2334444544
Q ss_pred HHhcCCHHHHHHHHHHHHHhCcc
Q 022783 262 YSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 262 yakLgq~eeALe~LekAIelG~~ 284 (292)
|..+|++++ +++|++|+++..+
T Consensus 511 ~~~~g~~~~-~~~~~~al~~~P~ 532 (681)
T 2pzi_A 511 AELAGNTDE-HKFYQTVWSTNDG 532 (681)
T ss_dssp HHHHTCCCT-TCHHHHHHHHCTT
T ss_pred HHHcCChHH-HHHHHHHHHhCCc
Confidence 444444444 4444444444433
No 131
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.42 E-value=8.5e-07 Score=69.92 Aligned_cols=82 Identities=23% Similarity=0.450 Sum_probs=63.9
Q ss_pred ceEEEEecC----CceeEEeeeC----CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc
Q 022783 85 EEYEVEIEQ----PYGLKFAKGR----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (292)
Q Consensus 85 ~~~~v~l~K----PlGl~~~~~~----~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~ 156 (292)
+.++|+|.| +||+.+..+. +.++||..|.|+|.|+++|.|++||+|+.+-.. .+ ......++...|+.
T Consensus 5 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~---~v-~~~~~~~~~~~l~~ 80 (108)
T 3cbz_A 5 NIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDM---NF-ENMSNDDAVRVLRD 80 (108)
T ss_dssp CEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTE---ET-TSCCHHHHHHHHHH
T ss_pred eEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHHh
Confidence 668899885 6999998763 469999999999999999999999999998632 11 11135567777875
Q ss_pred c---CCceEEEEeeccC
Q 022783 157 R---VGPLLMKMQKRYG 170 (292)
Q Consensus 157 r---~g~v~l~l~r~~~ 170 (292)
. .++|.|++.|+.-
T Consensus 81 ~~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 81 IVHKPGPIVLTVAKSGG 97 (108)
T ss_dssp HHTSSSCEEEEEECCCC
T ss_pred cccCCCeEEEEEEeCCC
Confidence 4 6789999999643
No 132
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.42 E-value=1.2e-06 Score=66.20 Aligned_cols=81 Identities=21% Similarity=0.342 Sum_probs=59.6
Q ss_pred ccceEEEEecC-----CceeEEeeeC-CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc
Q 022783 83 KYEEYEVEIEQ-----PYGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (292)
Q Consensus 83 ~~~~~~v~l~K-----PlGl~~~~~~-~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~ 156 (292)
+.+..+|+|.| .+|+.+..+. +.+++|..|.+++.|+++| |++||+|+++... .+-.. ..-+....++.
T Consensus 4 ~~~~~~v~l~k~~~~~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~---~v~~~-~~~~~~~~~~~ 78 (91)
T 1m5z_A 4 PVELHKVTLYKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHV---RTRDF-DCCLVVPLIAE 78 (91)
T ss_dssp CCEEEEEEEECCTTCSSSSEEEEECTTSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTE---ECTTC-CHHHHHHHHHT
T ss_pred CcceEEEEEEECCCCCCccEEEEeccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHc
Confidence 44678888876 6899998764 4599999999999999999 9999999998642 11111 12234455665
Q ss_pred cCCceEEEEeec
Q 022783 157 RVGPLLMKMQKR 168 (292)
Q Consensus 157 r~g~v~l~l~r~ 168 (292)
...++.|.+.|.
T Consensus 79 ~g~~v~l~v~R~ 90 (91)
T 1m5z_A 79 SGNKLDLVISRN 90 (91)
T ss_dssp STTEEEEEEEEC
T ss_pred CCCEEEEEEEeC
Confidence 556789998885
No 133
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.42 E-value=9.4e-07 Score=79.86 Aligned_cols=96 Identities=13% Similarity=0.109 Sum_probs=71.3
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhhHhH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHc-----CC-CCc
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQKERR-------EQDLREGLQLYRTGKYEVAREKFESVLG-----SK-PTP 248 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-------~~~~n~G~~L~k~gdYeeAIe~fekALe-----ld-P~~ 248 (292)
..++.|.|.+...+++.+++ .|.+...+.++. ....++|..+...|+|++|+..|++|++ .+ |
T Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~-- 261 (383)
T 3ulq_A 184 LQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILP-- 261 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGG--
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccch--
Confidence 45666777777666666665 343333332211 2345999999999999999999999998 34 4
Q ss_pred cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 249 EESSVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 249 ~d~a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
....+++|+|.+|..+|++++|+..+++|+++.
T Consensus 262 -~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 262 -SLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYS 294 (383)
T ss_dssp -GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 346789999999999999999999999998873
No 134
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.41 E-value=1.1e-06 Score=68.67 Aligned_cols=84 Identities=29% Similarity=0.525 Sum_probs=64.1
Q ss_pred ccceEEEEecC---CceeEEe-----ee-----CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhh
Q 022783 83 KYEEYEVEIEQ---PYGLKFA-----KG-----RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR 149 (292)
Q Consensus 83 ~~~~~~v~l~K---PlGl~~~-----~~-----~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~ 149 (292)
+.+.++|+|.| +||+.+. .+ .+++++|..|.++|.|+++|.|++||+|+++... .+ .....-+
T Consensus 7 ~~~~~~v~l~k~~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~---~v-~~~~~~~ 82 (108)
T 1q7x_A 7 PGDIFEVELAKNDNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGV---SL-EGATHKQ 82 (108)
T ss_dssp SSSEEEEEEESSSCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTE---EC-BSCTTSH
T ss_pred CCcEEEEEEEECCCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCE---EC-CCCCHHH
Confidence 44678999976 8999998 32 2469999999999999999999999999997631 11 1114446
Q ss_pred HHHHhhccCCceEEEEeeccC
Q 022783 150 TMYTIRQRVGPLLMKMQKRYG 170 (292)
Q Consensus 150 ~~~ai~~r~g~v~l~l~r~~~ 170 (292)
+..+++.....+.|.+.|...
T Consensus 83 ~~~~~~~~g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 83 AVETLRNTGQVVHLLLEKGQS 103 (108)
T ss_dssp HHHHHHHTTSEEEEEEECCCC
T ss_pred HHHHHHcCCCeEEEEEEeCCc
Confidence 667777666788999998544
No 135
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.41 E-value=6.1e-07 Score=80.44 Aligned_cols=66 Identities=15% Similarity=0.074 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 217 QDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 217 ~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
...++|..+.+.|++++|+..|+++++++|+. ..+|+|+|.+|.++|++++|+..+++|+++..++
T Consensus 307 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~ 372 (388)
T 1w3b_A 307 SLNNLANIKREQGNIEEAVRLYRKALEVFPEF---AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 372 (388)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTC---HHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 34578888888888888888888888888863 4568888888888888888888888888876553
No 136
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.41 E-value=2.8e-07 Score=88.10 Aligned_cols=97 Identities=16% Similarity=0.067 Sum_probs=73.4
Q ss_pred HhhccccchhhHHHH-HHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHH
Q 022783 186 AERNSGVISNRVREI-QMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACC 261 (292)
Q Consensus 186 a~rN~GvI~~~l~ei-qea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Acc 261 (292)
++++.|.+...+.+. +++ .|.+..++.+.. .-++++|..+++.|+|++|+++|+++|+++|+ ..+|+|+|.+
T Consensus 104 ~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~----~~~~~~lg~~ 179 (474)
T 4abn_A 104 ALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN----KVSLQNLSMV 179 (474)
T ss_dssp HHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC----HHHHHHHHHH
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC----HHHHHHHHHH
Confidence 334444444444444 443 455554444443 44569999999999999999999999999997 3679999999
Q ss_pred HHhc---------CCHHHHHHHHHHHHHhCccCh
Q 022783 262 YSKL---------NQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 262 yakL---------gq~eeALe~LekAIelG~~Df 286 (292)
|..+ |++++|+..+++|+++..++.
T Consensus 180 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 213 (474)
T 4abn_A 180 LRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDG 213 (474)
T ss_dssp HTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCH
Confidence 9999 999999999999999987654
No 137
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.41 E-value=4.5e-07 Score=69.05 Aligned_cols=72 Identities=19% Similarity=0.372 Sum_probs=57.5
Q ss_pred CCceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCccccccc--chhhHHHHhhccCCceEEEEeeccC
Q 022783 93 QPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAA--EYGRTMYTIRQRVGPLLMKMQKRYG 170 (292)
Q Consensus 93 KPlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~--~~g~~~~ai~~r~g~v~l~l~r~~~ 170 (292)
.+||+.+..+.+|+++|..|.++|.|++++.+++||+|+++.. ++.. .+.++...|+...+++.|++.|+..
T Consensus 13 ~~lG~~i~~~~~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing------~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 86 (88)
T 1kwa_A 13 EPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREING------ISVANQTVEQLQKMLREMRGSITFKIVPSYR 86 (88)
T ss_dssp SCCCEEEECSCGGGEEEEEECTTSHHHHHTCCCTTCEEEEETT------EEGGGSCHHHHHHHHHHCCEEEEEEEECCCC
T ss_pred CceeEEEEeCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC------EECCCCCHHHHHHHHhcCCCcEEEEEECCcC
Confidence 3599999876678999999999999999555999999999863 2233 5567778888777799999988543
No 138
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.40 E-value=6.7e-07 Score=83.72 Aligned_cols=68 Identities=19% Similarity=0.321 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHc----------------CCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLG----------------SKPTPEESSVASYNVACCYSKLNQVKAGLSALEDAL 279 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALe----------------ldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAI 279 (292)
..++++|+.+++.|+|++|+..|++||+ ++|. ...+|+|+|.||.++|++++|+++|++||
T Consensus 224 ~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~---~~~~~~nla~~~~~~g~~~~A~~~~~~al 300 (370)
T 1ihg_A 224 EDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV---ALSCVLNIGACKLKMSDWQGAVDSCLEAL 300 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH---HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH---HHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 4456999999999999999999999998 5553 45789999999999999999999999999
Q ss_pred HhCccCh
Q 022783 280 LAGYEDF 286 (292)
Q Consensus 280 elG~~Df 286 (292)
++..++.
T Consensus 301 ~~~p~~~ 307 (370)
T 1ihg_A 301 EIDPSNT 307 (370)
T ss_dssp TTCTTCH
T ss_pred HhCchhH
Confidence 9987654
No 139
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.40 E-value=4.9e-08 Score=71.77 Aligned_cols=91 Identities=13% Similarity=0.160 Sum_probs=65.7
Q ss_pred hhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccc---hhHHHHHHHH
Q 022783 187 ERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEE---SSVASYNVAC 260 (292)
Q Consensus 187 ~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d---~a~a~YN~Ac 260 (292)
+++.|.+....++.+++ .|.+...+.+.. .-.+++|..+++.|+|++|++.|+++|+++|++.+ ...++++++.
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~ 86 (111)
T 2l6j_A 7 QKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLEL 86 (111)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHH
Confidence 34444444444444443 455554444443 44569999999999999999999999999997422 1567999999
Q ss_pred HHHhcCCHHHHHHHHHH
Q 022783 261 CYSKLNQVKAGLSALED 277 (292)
Q Consensus 261 cyakLgq~eeALe~Lek 277 (292)
++..+|++++|+..+++
T Consensus 87 ~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 87 AQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHCCCCCSSSSSS
T ss_pred HHHHHHhHhhhHhHHHH
Confidence 99999998888776554
No 140
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.40 E-value=2.7e-07 Score=70.52 Aligned_cols=60 Identities=10% Similarity=0.080 Sum_probs=48.2
Q ss_pred HcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 227 RTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 227 k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
..|+|++|+..|+++|+++++.++...+|+|+|.||..+|++++|+..+++|+++..++.
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 61 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQ 61 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCch
Confidence 468999999999999999533334567899999999999999999999999999987754
No 141
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.40 E-value=7.1e-07 Score=69.75 Aligned_cols=85 Identities=18% Similarity=0.353 Sum_probs=63.5
Q ss_pred cccceEEEEecC---CceeEEeee--------CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhH
Q 022783 82 EKYEEYEVEIEQ---PYGLKFAKG--------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRT 150 (292)
Q Consensus 82 ~~~~~~~v~l~K---PlGl~~~~~--------~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~ 150 (292)
+..+.++|+|.| +||+.+... .+.++||..|.|++.|+++|.|++||+|+.+.. ..+ .....-++
T Consensus 6 ~~~~~~~v~l~k~~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng---~~v-~~~~~~~~ 81 (107)
T 1wf8_A 6 SGLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDG---ISL-VGVTQNFA 81 (107)
T ss_dssp CCEEEEEEEEECBTTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETT---EEC-BSCCHHHH
T ss_pred CCceEEEEEEEECCCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECC---EEC-CCCCHHHH
Confidence 356778888855 789999872 245899999999999999999999999999763 111 11123355
Q ss_pred HHHhhccCCceEEEEeeccC
Q 022783 151 MYTIRQRVGPLLMKMQKRYG 170 (292)
Q Consensus 151 ~~ai~~r~g~v~l~l~r~~~ 170 (292)
..+++....++.|++.|...
T Consensus 82 ~~~~~~~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 82 ATVLRNTKGNVRFVIGREKP 101 (107)
T ss_dssp HHHHHHCCSEEEEEEEEECC
T ss_pred HHHHhcCCCeEEEEEEeCCC
Confidence 66777667789999998643
No 142
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.38 E-value=4.2e-07 Score=83.32 Aligned_cols=71 Identities=17% Similarity=0.240 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccc--------------hhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEE--------------SSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d--------------~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
..++++|+.+++.|+|++|+..|++||.++|++.. ...+|+|+|.||.++|++++|+.+|++||++
T Consensus 180 ~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 259 (338)
T 2if4_A 180 DRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTE 259 (338)
T ss_dssp HHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 44569999999999999999999999999996310 0138999999999999999999999999999
Q ss_pred CccCh
Q 022783 282 GYEDF 286 (292)
Q Consensus 282 G~~Df 286 (292)
..++.
T Consensus 260 ~p~~~ 264 (338)
T 2if4_A 260 EEKNP 264 (338)
T ss_dssp CTTCH
T ss_pred CCCCH
Confidence 87654
No 143
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.38 E-value=1.8e-06 Score=67.37 Aligned_cols=85 Identities=16% Similarity=0.409 Sum_probs=64.7
Q ss_pred ccceEEEEecC---CceeEEeeeC----------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhh
Q 022783 83 KYEEYEVEIEQ---PYGLKFAKGR----------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR 149 (292)
Q Consensus 83 ~~~~~~v~l~K---PlGl~~~~~~----------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~ 149 (292)
.++.++|+|.| ++|+.+..+. +.+++|..|.+++.|+++|.|++||+|+.+-. ..+ ....+-+
T Consensus 6 ~~~~~~v~l~k~~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng---~~v-~~~~~~~ 81 (107)
T 1uhp_A 6 SGKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNG---RDL-SRATHDQ 81 (107)
T ss_dssp SSEEEEEEECCSSSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETT---EEC-TTCCHHH
T ss_pred CcEEEEEEEEeCCCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECC---EEC-CCCCHHH
Confidence 45778999986 5999997643 45999999999999999944999999999753 222 2233456
Q ss_pred HHHHhhccCCceEEEEeeccCC
Q 022783 150 TMYTIRQRVGPLLMKMQKRYGK 171 (292)
Q Consensus 150 ~~~ai~~r~g~v~l~l~r~~~~ 171 (292)
++..|+....++.|++.|.-..
T Consensus 82 ~~~~~~~~~~~v~l~v~R~~~~ 103 (107)
T 1uhp_A 82 AVEAFKTAKEPIVVQVLRRTSG 103 (107)
T ss_dssp HHHHHHHCCSSEEEEEEECCSS
T ss_pred HHHHHHcCCCcEEEEEEeCCCC
Confidence 7777877677899999886543
No 144
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.38 E-value=1.6e-06 Score=66.90 Aligned_cols=84 Identities=24% Similarity=0.417 Sum_probs=63.2
Q ss_pred cceEEEEecC---CceeEEeeeC-------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHH
Q 022783 84 YEEYEVEIEQ---PYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYT 153 (292)
Q Consensus 84 ~~~~~v~l~K---PlGl~~~~~~-------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~a 153 (292)
.+.++|+|.| +||+.+..+. +.+++|..|.+++.|+++|.|++||+|+.+.. ..+ .......+..+
T Consensus 3 ~~~~~v~l~k~~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng---~~v-~~~~~~~~~~~ 78 (102)
T 2i1n_A 3 FKYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNE---VDV-SEVVHSRAVEA 78 (102)
T ss_dssp EEEEEEEEECBTTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETT---EEC-SSCCHHHHHHH
T ss_pred ceEEEEEEEECCCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECC---EEC-CCCCHHHHHHH
Confidence 3556777775 6899998754 35999999999999999999999999999763 222 11224566677
Q ss_pred hhccCCceEEEEeeccCC
Q 022783 154 IRQRVGPLLMKMQKRYGK 171 (292)
Q Consensus 154 i~~r~g~v~l~l~r~~~~ 171 (292)
++....++.|.+.|....
T Consensus 79 ~~~~g~~v~l~v~R~~~~ 96 (102)
T 2i1n_A 79 LKEAGPVVRLVVRRRQPP 96 (102)
T ss_dssp HHHSCSEEEEEEEEECCC
T ss_pred HHcCCCeEEEEEEeCCCC
Confidence 777667889999986544
No 145
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.38 E-value=1.5e-06 Score=70.11 Aligned_cols=85 Identities=22% Similarity=0.419 Sum_probs=66.5
Q ss_pred ccccceEEEEecC----CceeEEeee-------CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccc--h
Q 022783 81 EEKYEEYEVEIEQ----PYGLKFAKG-------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--Y 147 (292)
Q Consensus 81 ~~~~~~~~v~l~K----PlGl~~~~~-------~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~--~ 147 (292)
+...+.++|+|.| +||+.+... .+++++|..|.+++.|+++|.|++||+|+++... +... +
T Consensus 11 ~~~~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~------~v~~~~~ 84 (129)
T 2dmz_A 11 SSLFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGV------NIQGFAN 84 (129)
T ss_dssp SCCEEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTB------CCTTCCH
T ss_pred CCCCcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCE------ECCCCCH
Confidence 3456889999954 799999874 3468999999999999999999999999998742 2223 5
Q ss_pred hhHHHHhhccCCceEEEEeeccCC
Q 022783 148 GRTMYTIRQRVGPLLMKMQKRYGK 171 (292)
Q Consensus 148 g~~~~ai~~r~g~v~l~l~r~~~~ 171 (292)
.++..+|+.....|.|++.|.-..
T Consensus 85 ~~~~~~l~~~~~~v~l~v~R~~~~ 108 (129)
T 2dmz_A 85 HDVVEVLRNAGQVVHLTLVRRKTS 108 (129)
T ss_dssp HHHHHHHHHCCSSEEEEEEEESSS
T ss_pred HHHHHHHHcCCCeEEEEEEeCCcc
Confidence 567777877667889999986543
No 146
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.38 E-value=1.5e-06 Score=72.53 Aligned_cols=62 Identities=18% Similarity=0.133 Sum_probs=32.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHc--CCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 219 LREGLQLYRTGKYEVAREKFESVLG--SKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 219 ~n~G~~L~k~gdYeeAIe~fekALe--ldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
+..|..++..|+|++|++.|++++. .+|. ...+|+++|.+|..+|++++|+..++++++...
T Consensus 109 ~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~---~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~ 172 (252)
T 2ho1_A 109 NNYGGFLYEQKRYEEAYQRLLEASQDTLYPE---RSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNR 172 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTCTTCTT---HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhCccCcc---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCc
Confidence 3555555555555555555555555 3332 233455555555555555555555555555543
No 147
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.38 E-value=1.3e-06 Score=69.25 Aligned_cols=86 Identities=20% Similarity=0.397 Sum_probs=61.2
Q ss_pred ccccccceEEEEecC---CceeEEeeeC--CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHH
Q 022783 79 EQEEKYEEYEVEIEQ---PYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYT 153 (292)
Q Consensus 79 ~~~~~~~~~~v~l~K---PlGl~~~~~~--~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~a 153 (292)
.+-...+.++|+|.| ++|+.+..+. +.+++|..|.+++.|+++|.|++||+|+++.. ..+ ......++...
T Consensus 18 ~~~~~~~~~~v~l~~~~~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng---~~v-~~~~~~~~~~~ 93 (112)
T 2r4h_A 18 LYFQSMDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEING---ETT-KNMKHSRAIEL 93 (112)
T ss_dssp -----CCEEEEEEECBTTBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETT---EEC-TTCCHHHHHHH
T ss_pred cccCCCceEEEEEEcCCCccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECC---EEC-CCCCHHHHHHH
Confidence 344455667888876 5899987654 46999999999999999999999999999763 222 11134456667
Q ss_pred hhccCCceEEEEeec
Q 022783 154 IRQRVGPLLMKMQKR 168 (292)
Q Consensus 154 i~~r~g~v~l~l~r~ 168 (292)
++....+|.|++.|.
T Consensus 94 l~~~g~~v~l~v~R~ 108 (112)
T 2r4h_A 94 IKNGGRRVRLFLKRG 108 (112)
T ss_dssp HHTTTTEEEEEEECC
T ss_pred HHcCCCeEEEEEEeC
Confidence 776556789999885
No 148
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.38 E-value=8e-07 Score=75.98 Aligned_cols=94 Identities=19% Similarity=0.208 Sum_probs=67.8
Q ss_pred hccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHh
Q 022783 188 RNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSK 264 (292)
Q Consensus 188 rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accyak 264 (292)
.+.|.+....++.+++ .|.+.....+.. ......|..++..|+|++|+..|+++++++|+. ..+|+++|.+|..
T Consensus 176 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~l~~~~~~ 252 (327)
T 3cv0_A 176 ASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGY---VRVMYNMAVSYSN 252 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHH
Confidence 3344444444444443 333333333332 334689999999999999999999999998863 4579999999999
Q ss_pred cCCHHHHHHHHHHHHHhCcc
Q 022783 265 LNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 265 Lgq~eeALe~LekAIelG~~ 284 (292)
+|++++|+..+++|+++..+
T Consensus 253 ~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 253 MSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp TTCHHHHHHHHHHHHHHHTT
T ss_pred hccHHHHHHHHHHHHHhCCc
Confidence 99999999999999888655
No 149
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.37 E-value=1.6e-06 Score=74.34 Aligned_cols=64 Identities=11% Similarity=0.030 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHHHH----cCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHh----cCCHHHHHHHHHHHHHhC
Q 022783 214 RREQDLREGLQLYR----TGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSK----LNQVKAGLSALEDALLAG 282 (292)
Q Consensus 214 ~~~~~~n~G~~L~k----~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accyak----Lgq~eeALe~LekAIelG 282 (292)
.....+++|..+.. .+++++|+..|+++++.+. ..+++|+|.+|.. .+++++|+..+++|++.|
T Consensus 73 ~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~-----~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~ 144 (273)
T 1ouv_A 73 YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKY-----AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN 144 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcCC-----ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC
Confidence 33445577777777 7777777777777776641 3467777777777 777777777777777776
No 150
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.37 E-value=1.8e-06 Score=73.93 Aligned_cols=91 Identities=18% Similarity=0.060 Sum_probs=67.2
Q ss_pred ccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhc
Q 022783 189 NSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKL 265 (292)
Q Consensus 189 N~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakL 265 (292)
+.|.+....++.+++ .|.+.....+.. ...+..|..+...|+|++|+..|+++++++|+. ..+|+++|.+|..+
T Consensus 130 ~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~---~~~~~~l~~~~~~~ 206 (330)
T 3hym_B 130 AYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPED---PFVMHEVGVVAFQN 206 (330)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC---HHHHHHHHHHHHHT
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCC---hHHHHHHHHHHHHc
Confidence 344444444444443 344443333332 445689999999999999999999999999974 46799999999999
Q ss_pred CCHHHHHHHHHHHHHhC
Q 022783 266 NQVKAGLSALEDALLAG 282 (292)
Q Consensus 266 gq~eeALe~LekAIelG 282 (292)
|++++|+..+++|+++.
T Consensus 207 ~~~~~A~~~~~~a~~~~ 223 (330)
T 3hym_B 207 GEWKTAEKWFLDALEKI 223 (330)
T ss_dssp TCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHh
Confidence 99999999999998863
No 151
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.36 E-value=1.4e-06 Score=67.85 Aligned_cols=85 Identities=21% Similarity=0.427 Sum_probs=63.0
Q ss_pred ccccceEEEEe--cC---CceeEEeee-------CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchh
Q 022783 81 EEKYEEYEVEI--EQ---PYGLKFAKG-------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYG 148 (292)
Q Consensus 81 ~~~~~~~~v~l--~K---PlGl~~~~~-------~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g 148 (292)
+...+.++|+| ++ +||+.+..+ .+.+++|..|.+++.|+++|.|++||+|+++... .+-. ..+.
T Consensus 8 ~~~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~---~v~~-~~~~ 83 (108)
T 2jre_A 8 ASGFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDV---NVQG-MAQS 83 (108)
T ss_dssp SSSCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTE---ECTT-SCHH
T ss_pred ccCcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCE---ECCC-CCHH
Confidence 34567899999 44 489999764 3459999999999999999999999999998632 1111 1244
Q ss_pred hHHHHhhccCCceEEEEeecc
Q 022783 149 RTMYTIRQRVGPLLMKMQKRY 169 (292)
Q Consensus 149 ~~~~ai~~r~g~v~l~l~r~~ 169 (292)
++..+|+....++.|++.|.-
T Consensus 84 ~~~~~l~~~g~~v~l~v~R~~ 104 (108)
T 2jre_A 84 DVVEVLRNAGNPVRLLLIRRL 104 (108)
T ss_dssp HHHHHHHHHCSEEEEEEEECC
T ss_pred HHHHHHHcCCCeEEEEEEeCC
Confidence 566777765567899998853
No 152
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.36 E-value=2.3e-07 Score=93.14 Aligned_cols=96 Identities=9% Similarity=-0.042 Sum_probs=76.8
Q ss_pred hccccchhhHHHHHHHh---hHHHHHhhHh-HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHH
Q 022783 188 RNSGVISNRVREIQMQN---YMKKKEQKER-REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYS 263 (292)
Q Consensus 188 rN~GvI~~~l~eiqea~---Y~kkk~lk~~-~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accya 263 (292)
...|....++..++... +.......+. ..-.+.+|..+++.|+|++|++.|+++++++|++ ..+|+|+|.+|.
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~---~~a~~~lg~~~~ 478 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWR---WRLVWYRAVAEL 478 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcch---HHHHHHHHHHHH
Confidence 77888888888888764 3222222233 3556799999999999999999999999999974 567999999999
Q ss_pred hcCCHHHHHHHHHHHHHhCccCh
Q 022783 264 KLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 264 kLgq~eeALe~LekAIelG~~Df 286 (292)
.+|++++|++++++|+++..++.
T Consensus 479 ~~g~~~~A~~~~~~al~l~P~~~ 501 (681)
T 2pzi_A 479 LTGDYDSATKHFTEVLDTFPGEL 501 (681)
T ss_dssp HHTCHHHHHHHHHHHHHHSTTCS
T ss_pred HcCCHHHHHHHHHHHHHhCCCCh
Confidence 99999999999999999987754
No 153
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=98.36 E-value=1.3e-06 Score=69.42 Aligned_cols=81 Identities=21% Similarity=0.251 Sum_probs=62.4
Q ss_pred ceEEEEecC---CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhcc--CC
Q 022783 85 EEYEVEIEQ---PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR--VG 159 (292)
Q Consensus 85 ~~~~v~l~K---PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r--~g 159 (292)
+..+|+|.| |||+.+..+.+|.+||..|.+||-|+++|.|.+||.|+.+... .| ....-.++...++.- ..
T Consensus 5 ~~k~V~l~K~~~~LG~tI~~~g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~---~v-~g~~h~evv~lLk~~~~g~ 80 (95)
T 3gge_A 5 IEKEVNVYKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGE---NI-VGWRHYDVAKKLKELKKEE 80 (95)
T ss_dssp EEEEEEEECCSSCCCEEEECSSSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTE---EC-TTCCHHHHHHHHHHSCTTC
T ss_pred eEEEEEEEECCCCceEEEEcCCCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCE---Ec-cCCCHHHHHHHHHhCCCCC
Confidence 456788876 9999998767889999999999999999999999999998742 11 112233677788864 34
Q ss_pred ceEEEEeecc
Q 022783 160 PLLMKMQKRY 169 (292)
Q Consensus 160 ~v~l~l~r~~ 169 (292)
++.|+|-+|-
T Consensus 81 ~~~L~lv~p~ 90 (95)
T 3gge_A 81 LFTMKLIEPK 90 (95)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEECcc
Confidence 6889888764
No 154
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.36 E-value=2.1e-06 Score=66.87 Aligned_cols=83 Identities=22% Similarity=0.432 Sum_probs=63.3
Q ss_pred ccceEEEEecC----CceeEEeeeCC--CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc
Q 022783 83 KYEEYEVEIEQ----PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (292)
Q Consensus 83 ~~~~~~v~l~K----PlGl~~~~~~~--G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~ 156 (292)
.....+|+|.| ++|+.+..+.+ .+++|..|.+++.|+++| |++||+|+++... .+ ....+.++...|+.
T Consensus 13 ~~~~~~v~l~k~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~---~v-~~~~~~~~~~~l~~ 87 (104)
T 1wi2_A 13 QFLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDV---DF-QDIEHSKAVEILKT 87 (104)
T ss_dssp SSCCEEEEECCCTTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHT-CCTTCEEEEETTE---EC-SSCCHHHHHHHHHH
T ss_pred CCCCEEEEEEeCCCCCccEEEEcccCCCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCE---EC-CCCCHHHHHHHHhC
Confidence 33457788876 48899987644 489999999999999999 9999999997632 11 11226677778887
Q ss_pred cCCceEEEEeeccCC
Q 022783 157 RVGPLLMKMQKRYGK 171 (292)
Q Consensus 157 r~g~v~l~l~r~~~~ 171 (292)
..++.|+++|...+
T Consensus 88 -~~~v~l~v~r~~~~ 101 (104)
T 1wi2_A 88 -AREISMRVRFFSGP 101 (104)
T ss_dssp -SSSEEEEEECCCCS
T ss_pred -CCEEEEEEEECCCC
Confidence 67899999997654
No 155
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.35 E-value=1e-06 Score=79.70 Aligned_cols=98 Identities=10% Similarity=0.037 Sum_probs=71.1
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhh-------H-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCc---cc
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQK-------E-RREQDLREGLQLYRTGKYEVAREKFESVLGSKPTP---EE 250 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk-------~-~~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~---~d 250 (292)
..++++.|.+...+++...+ .|.++..+- . ......+.|..+...|+|++|++.|++||++.|.. ..
T Consensus 143 a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 222 (383)
T 3ulq_A 143 AEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQL 222 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHH
Confidence 34555666666555555554 333333321 1 12334599999999999999999999999775532 23
Q ss_pred hhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 251 SSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 251 ~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
...+++|+|.||..+|++++|+..+++|+++
T Consensus 223 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 253 (383)
T 3ulq_A 223 MGRTLYNIGLCKNSQSQYEDAIPYFKRAIAV 253 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999985
No 156
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.35 E-value=1.3e-06 Score=70.68 Aligned_cols=65 Identities=14% Similarity=0.088 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
.-.++.|..+.+.|+|++|+..|+++++.+|+. ..+|+++|.+|..+|++++|+..++++++...
T Consensus 114 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 114 IANLNKGICSAKQGQFGLAEAYLKRSLAAQPQF---PPAFKELARTKMLAGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---chHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 345699999999999999999999999999974 46799999999999999999999999999876
No 157
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.35 E-value=2.5e-06 Score=66.85 Aligned_cols=82 Identities=24% Similarity=0.415 Sum_probs=61.3
Q ss_pred ceEEEEecC---CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCce
Q 022783 85 EEYEVEIEQ---PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL 161 (292)
Q Consensus 85 ~~~~v~l~K---PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v 161 (292)
+..+|+|.| +||+.+..+.+.+++|..|.+++.|+++|.|++||+|+++.. ..+ ......++...|+.....|
T Consensus 15 ~~~~v~l~~~~~~lG~~l~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng---~~v-~~~~~~~~~~~l~~~g~~v 90 (111)
T 2dlu_A 15 HVEEVELINDGSGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGG---TNV-QGMTSEQVAQVLRNCGNSV 90 (111)
T ss_dssp EEEEEEEECCSSCCCEEEECCSSSSBEEEEECTTSSHHHHTCCCSSCEEEEESS---CCC-TTSCHHHHHHHHHHHCSEE
T ss_pred ceEEEEEEeCCCccCEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHHhCCCeE
Confidence 446677654 699999887778999999999999999999999999999763 111 1112345566666555678
Q ss_pred EEEEeeccC
Q 022783 162 LMKMQKRYG 170 (292)
Q Consensus 162 ~l~l~r~~~ 170 (292)
.|++.|...
T Consensus 91 ~l~v~R~~~ 99 (111)
T 2dlu_A 91 RMLVARDPA 99 (111)
T ss_dssp EEEEEESCT
T ss_pred EEEEEeCCC
Confidence 999988544
No 158
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.34 E-value=2.1e-06 Score=66.20 Aligned_cols=79 Identities=20% Similarity=0.414 Sum_probs=60.0
Q ss_pred ceEEEEecC----CceeEEeeeCC-----------CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccc--h
Q 022783 85 EEYEVEIEQ----PYGLKFAKGRD-----------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--Y 147 (292)
Q Consensus 85 ~~~~v~l~K----PlGl~~~~~~~-----------G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~--~ 147 (292)
..|.|+|.| .||+.+....+ ++++|..|.|+|.|+++|.|++||+|+++... +... +
T Consensus 4 dp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~------~v~~~~~ 77 (103)
T 2fcf_A 4 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGM------DLRDASH 77 (103)
T ss_dssp SCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTE------ECTTCCH
T ss_pred CCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCE------ECCCCCH
Confidence 347777775 47888865432 58999999999999999999999999997631 2233 6
Q ss_pred hhHHHHhhccCCceEEEEeecc
Q 022783 148 GRTMYTIRQRVGPLLMKMQKRY 169 (292)
Q Consensus 148 g~~~~ai~~r~g~v~l~l~r~~ 169 (292)
.++..+|+...+++.|++.|.-
T Consensus 78 ~~~~~~l~~~~~~v~l~v~r~~ 99 (103)
T 2fcf_A 78 EQAVEAIRKAGNPVVFMVQSII 99 (103)
T ss_dssp HHHHHHHHTCCSSEEEEEECCC
T ss_pred HHHHHHHHhCCCcEEEEEEECC
Confidence 6777888877789999998853
No 159
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.34 E-value=2.4e-06 Score=65.09 Aligned_cols=81 Identities=28% Similarity=0.531 Sum_probs=61.1
Q ss_pred ceEEEEec---CCceeEEeeeC-----CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc
Q 022783 85 EEYEVEIE---QPYGLKFAKGR-----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (292)
Q Consensus 85 ~~~~v~l~---KPlGl~~~~~~-----~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~ 156 (292)
+.++|+|. .+||+.+..+. +++++|..|.+++.|+++|.|++||+|+++... .+ ....+.++...++.
T Consensus 5 ~~~~v~l~k~~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~---~v-~~~~~~~~~~~l~~ 80 (96)
T 1d5g_A 5 DIFEVELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGV---SL-EGATHKQAVETLRN 80 (96)
T ss_dssp CEEEEEEECSSSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTE---EC-TTCCHHHHHHHHHS
T ss_pred CEEEEEEEeCCCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHHc
Confidence 56778875 57999998653 359999999999999999999999999997631 11 11144566677776
Q ss_pred cCCceEEEEeecc
Q 022783 157 RVGPLLMKMQKRY 169 (292)
Q Consensus 157 r~g~v~l~l~r~~ 169 (292)
...++.|.+.|..
T Consensus 81 ~g~~v~l~v~R~~ 93 (96)
T 1d5g_A 81 TGQVVHLLLEKGQ 93 (96)
T ss_dssp CCSEEEEEEECCS
T ss_pred CCCeEEEEEEcCC
Confidence 5567899998854
No 160
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.34 E-value=1.1e-06 Score=84.50 Aligned_cols=97 Identities=12% Similarity=0.081 Sum_probs=77.2
Q ss_pred HhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHH
Q 022783 186 AERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCY 262 (292)
Q Consensus 186 a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accy 262 (292)
++.+.|.+...+++.+++ .|.+...+.+.. .-.+++|..+.+.|+|++|++.|+++++++|++ ..+++|+|.+|
T Consensus 59 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~l~~~~ 135 (568)
T 2vsy_A 59 AVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEE---PYITAQLLNWR 135 (568)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHH
Confidence 445556666555555554 455554444443 445699999999999999999999999999974 46799999999
Q ss_pred Hhc---CCHHHHHHHHHHHHHhCccC
Q 022783 263 SKL---NQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 263 akL---gq~eeALe~LekAIelG~~D 285 (292)
..+ |++++|++.+++|++.+..+
T Consensus 136 ~~~~~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 136 RRLCDWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp HHTTCCTTHHHHHHHHHHHHHHTCCC
T ss_pred HHhhccccHHHHHHHHHHHHhcCCcc
Confidence 999 99999999999999998764
No 161
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.34 E-value=1.9e-06 Score=67.06 Aligned_cols=82 Identities=24% Similarity=0.438 Sum_probs=60.6
Q ss_pred eEEEEecC---CceeEEeeeC-------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhh
Q 022783 86 EYEVEIEQ---PYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIR 155 (292)
Q Consensus 86 ~~~v~l~K---PlGl~~~~~~-------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~ 155 (292)
.++|+|.| ++|+.+..+. +.+++|..|.++|.|+++|.|++||+|+++.. ..+ .....-++...++
T Consensus 4 ~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng---~~v-~~~~~~~~~~~~~ 79 (105)
T 2awx_A 4 IMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNS---VSL-EEVTHEEAVTALK 79 (105)
T ss_dssp EEEEEEECBTTBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETT---EEC-TTCBHHHHHHHHH
T ss_pred EEEEEEEECCCCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHH
Confidence 45677654 7899998653 25999999999999999999999999999763 222 1123445667777
Q ss_pred ccCCceEEEEeeccCC
Q 022783 156 QRVGPLLMKMQKRYGK 171 (292)
Q Consensus 156 ~r~g~v~l~l~r~~~~ 171 (292)
.....+.|++.|....
T Consensus 80 ~~~~~v~l~v~R~~~~ 95 (105)
T 2awx_A 80 NTSDFVYLKVAKPTSM 95 (105)
T ss_dssp SCCSEEEEEEECCCC-
T ss_pred cCCCeEEEEEEcCCCC
Confidence 6667889999986543
No 162
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.33 E-value=8.7e-07 Score=79.40 Aligned_cols=63 Identities=13% Similarity=0.054 Sum_probs=40.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHH-HHHHHHHHHHhCcc
Q 022783 219 LREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKA-GLSALEDALLAGYE 284 (292)
Q Consensus 219 ~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~ee-ALe~LekAIelG~~ 284 (292)
+++|..+.+.|+|++|++.|+++|+++|++ ..+|+|++.++..+|+.++ +...+++++++.++
T Consensus 204 ~~la~~~~~~g~~~eA~~~l~~al~~~p~~---~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~ 267 (291)
T 3mkr_A 204 NGQAACHMAQGRWEAAEGVLQEALDKDSGH---PETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRS 267 (291)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCC
Confidence 356666667777777777777777766653 3356677777777776654 34566666666654
No 163
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.33 E-value=1.2e-06 Score=70.01 Aligned_cols=81 Identities=17% Similarity=0.242 Sum_probs=62.1
Q ss_pred eEEEEecC----CceeEEeeeCC---CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccC
Q 022783 86 EYEVEIEQ----PYGLKFAKGRD---GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV 158 (292)
Q Consensus 86 ~~~v~l~K----PlGl~~~~~~~---G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~ 158 (292)
.++|+|.| +||+.+..+.+ ++++|..|.+++.|+++|.|++||+|+++.. ..+ ....+.++...|+...
T Consensus 16 ~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing---~~v-~~~~~~~~~~~l~~~g 91 (117)
T 1v62_A 16 PLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDG---TSM-EHCSLLEATKLLASIS 91 (117)
T ss_dssp SEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETT---EET-TSCCHHHHHHHHHSCS
T ss_pred cEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHHhCC
Confidence 46677765 68999987643 4699999999999999999999999999763 222 1134556778888666
Q ss_pred CceEEEEeeccC
Q 022783 159 GPLLMKMQKRYG 170 (292)
Q Consensus 159 g~v~l~l~r~~~ 170 (292)
..|.|++.|..-
T Consensus 92 ~~v~l~v~r~~~ 103 (117)
T 1v62_A 92 EKVRLEILPVPQ 103 (117)
T ss_dssp SEEEEEECCBTT
T ss_pred CeEEEEEEECCC
Confidence 788999988654
No 164
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.32 E-value=1.9e-06 Score=69.21 Aligned_cols=85 Identities=14% Similarity=0.236 Sum_probs=64.2
Q ss_pred cccceEEEEecC---CceeEEeeeC--CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc
Q 022783 82 EKYEEYEVEIEQ---PYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (292)
Q Consensus 82 ~~~~~~~v~l~K---PlGl~~~~~~--~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~ 156 (292)
...+.++|+|.| .+|+.+..+. +++++|..|.+++.|+++|.|++||+|+++... .+ ......+++.+|+.
T Consensus 16 ~~~~~~~v~l~~~~~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~---~v-~~~~~~~~~~~l~~ 91 (123)
T 1ueq_A 16 LKGTFLSTTLKKSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEV---CV-LGHTHADVVKLFQS 91 (123)
T ss_dssp CCSEEEEEEEECCTTSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTE---EC-TTSCHHHHHHHHHT
T ss_pred CCCcEEEEEEEeCCCceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHHh
Confidence 344678888887 4889988653 458999999999999999999999999997631 11 11135567788886
Q ss_pred c--CCceEEEEeeccC
Q 022783 157 R--VGPLLMKMQKRYG 170 (292)
Q Consensus 157 r--~g~v~l~l~r~~~ 170 (292)
. ...|.|++.|...
T Consensus 92 ~~~g~~v~l~v~R~~~ 107 (123)
T 1ueq_A 92 VPIGQSVNLVLCRGYP 107 (123)
T ss_dssp SCTTCEEEEEEEESCC
T ss_pred CCCCCeEEEEEEeCCC
Confidence 4 4678999999653
No 165
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.32 E-value=1.7e-06 Score=64.93 Aligned_cols=75 Identities=24% Similarity=0.470 Sum_probs=58.1
Q ss_pred EEEEec--CCceeEEeeeCC--CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccc--hhhHHHHhhccCCc
Q 022783 87 YEVEIE--QPYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGRTMYTIRQRVGP 160 (292)
Q Consensus 87 ~~v~l~--KPlGl~~~~~~~--G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~--~g~~~~ai~~r~g~ 160 (292)
++|+++ .|+|+.+..+.+ .+++|..|.|++.|+++| +++||+|+.+... +... +.++...|+....+
T Consensus 4 ~~v~~~~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~------~v~~~~~~~~~~~l~~~~~~ 76 (87)
T 2pa1_A 4 LTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDAD-LRPGDIIVAINGE------SAEGMLHAEAQSKIRQSPSP 76 (87)
T ss_dssp EEEEECSSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTT-CCTTCEEEEETTE------ESTTCCHHHHHHHHHTCCSS
T ss_pred EEEEECCCCccCEEEecccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCE------ECCCCCHHHHHHHHHcCCCe
Confidence 444444 478999987654 589999999999999999 9999999997632 2223 56677788866689
Q ss_pred eEEEEeec
Q 022783 161 LLMKMQKR 168 (292)
Q Consensus 161 v~l~l~r~ 168 (292)
+.|.+.|.
T Consensus 77 v~l~v~R~ 84 (87)
T 2pa1_A 77 LRLQLDRI 84 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 99999985
No 166
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.31 E-value=1.6e-06 Score=78.37 Aligned_cols=65 Identities=18% Similarity=0.030 Sum_probs=56.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
....|..+.+.|+|++|+..|+++++++|++ ..+|+++|.+|..+|++++|+..+++|+++..++
T Consensus 298 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~---~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 362 (450)
T 2y4t_A 298 KERICHCFSKDEKPVEAIRVCSEVLQMEPDN---VNALKDRAEAYLIEEMYDEAIQDYETAQEHNEND 362 (450)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCccc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcch
Confidence 4588899999999999999999999998863 4679999999999999999999999999987664
No 167
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.31 E-value=1.6e-06 Score=65.48 Aligned_cols=79 Identities=19% Similarity=0.352 Sum_probs=59.8
Q ss_pred ceEEEEecC----CceeEEeeeC--CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccC
Q 022783 85 EEYEVEIEQ----PYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV 158 (292)
Q Consensus 85 ~~~~v~l~K----PlGl~~~~~~--~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~ 158 (292)
..++|+|.| ++|+.+..+. +.+++|..|.+++.|+++|.+++||+|+.+.. ..+ ....+.++...++...
T Consensus 4 ~~~~v~l~k~~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing---~~v-~~~~~~~~~~~~~~~~ 79 (90)
T 1qav_A 4 QRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNG---EDL-SSATHDEAVQALKKTG 79 (90)
T ss_dssp SCEEEEEECCTTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETT---EEC-TTCCHHHHHHHHHTCC
T ss_pred ccEEEEEEeCCCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHHhCC
Confidence 457788877 7999998763 35899999999999999945999999999763 111 1123456677787666
Q ss_pred CceEEEEee
Q 022783 159 GPLLMKMQK 167 (292)
Q Consensus 159 g~v~l~l~r 167 (292)
.++.|+++|
T Consensus 80 ~~v~l~v~r 88 (90)
T 1qav_A 80 KEVVLEVKY 88 (90)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEE
Confidence 788998887
No 168
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.31 E-value=2.4e-06 Score=67.72 Aligned_cols=79 Identities=25% Similarity=0.389 Sum_probs=59.8
Q ss_pred eEEEEecC----CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCce
Q 022783 86 EYEVEIEQ----PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL 161 (292)
Q Consensus 86 ~~~v~l~K----PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v 161 (292)
..+|+|.| +||+.+... +++++|..|.+++.|+++|.+++||+|+++.. ..+ ....+.++...|+...+.+
T Consensus 26 ~~~v~l~k~~~~~lG~~i~~~-~~gv~V~~V~~~spA~~aGll~~GD~I~~vng---~~v-~~~~~~~~~~~l~~~~~~v 100 (113)
T 1va8_A 26 VKIVRIEKARDIPLGATVRNE-MDSVIISRIVKGGAAEKSGLLHEGDEVLEING---IEI-RGKDVNEVFDLLSDMHGTL 100 (113)
T ss_dssp CEEEEEEECTTCCCCEEEEEC-SSSEEEEEECTTSHHHHHTCCCTTCEEEEETT---EEC-TTCCHHHHHHHHHHCCEEE
T ss_pred eEEEEEEeCCCCceeEEEEeC-CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHHcCCCeE
Confidence 34566664 889888764 67999999999999999996699999999763 111 1124556778888777889
Q ss_pred EEEEeecc
Q 022783 162 LMKMQKRY 169 (292)
Q Consensus 162 ~l~l~r~~ 169 (292)
.|++.|..
T Consensus 101 ~l~v~r~~ 108 (113)
T 1va8_A 101 TFVLIPSS 108 (113)
T ss_dssp EEEEECCC
T ss_pred EEEEEECC
Confidence 99998743
No 169
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.31 E-value=3.5e-06 Score=67.79 Aligned_cols=64 Identities=19% Similarity=0.216 Sum_probs=45.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcC---CCCc-cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGS---KPTP-EESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALel---dP~~-~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
..+.|..+...|+|++|+..|++++++ .++. .....+++|+|.+|..+|++++|+..+++|+++
T Consensus 69 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 136 (203)
T 3gw4_A 69 LHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVY 136 (203)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 347778888888888888888888765 3321 133556778888888888888888888877755
No 170
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.31 E-value=2e-06 Score=72.91 Aligned_cols=66 Identities=14% Similarity=0.034 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCC-----CCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSK-----PTPEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeld-----P~~~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
....++|..+...|+|++|+..|++++++. ++......+++++|.+|..+|++++|++.+++|+++
T Consensus 112 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 112 ATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344699999999999999999999999874 333355678999999999999999999999999987
No 171
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.30 E-value=3.9e-06 Score=65.64 Aligned_cols=86 Identities=13% Similarity=0.322 Sum_probs=63.5
Q ss_pred ccceEEEEecC---CceeEEeeeCC-----CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHh
Q 022783 83 KYEEYEVEIEQ---PYGLKFAKGRD-----GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (292)
Q Consensus 83 ~~~~~~v~l~K---PlGl~~~~~~~-----G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai 154 (292)
..+.+.+++.| ++|+.+....+ ++++|..|.+++.|+++|.|++||+|+++-. ..+ ....+.++...|
T Consensus 9 ~~~~~~~~l~~~~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing---~~v-~~~~~~~~~~~l 84 (111)
T 2koj_A 9 VGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNG---VDL-AGKSQEEVVSLL 84 (111)
T ss_dssp SCEEEEEEEECBTTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETT---EEC-TTSCHHHHHHHH
T ss_pred cCcEEEEEEEECCCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECC---EEC-CCCCHHHHHHHH
Confidence 34667888764 78999987643 5899999999999999998999999999763 223 111244566777
Q ss_pred hcc--CCceEEEEeeccCCc
Q 022783 155 RQR--VGPLLMKMQKRYGKM 172 (292)
Q Consensus 155 ~~r--~g~v~l~l~r~~~~~ 172 (292)
+.. ..+|.|++.|.-..+
T Consensus 85 ~~~~~g~~v~l~v~R~~~~~ 104 (111)
T 2koj_A 85 RSTKMEGTVSLLVFRQEEAF 104 (111)
T ss_dssp HHCCCSSEEEEEEEECCCCC
T ss_pred HhCCCCCeEEEEEEeCCCCc
Confidence 753 457899998865444
No 172
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.30 E-value=2.9e-06 Score=64.00 Aligned_cols=78 Identities=15% Similarity=0.376 Sum_probs=60.0
Q ss_pred EEEEecC---CceeEEeeeCC-CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccch--hhHHHHhhccCCc
Q 022783 87 YEVEIEQ---PYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEY--GRTMYTIRQRVGP 160 (292)
Q Consensus 87 ~~v~l~K---PlGl~~~~~~~-G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~--g~~~~ai~~r~g~ 160 (292)
..|+|.| ++|+.+..+.+ .+++|..|.+++.|+++| |++||+|+.+... +...+ .++...|+....+
T Consensus 6 r~v~l~k~~~g~G~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~------~v~~~~~~~~~~~l~~~~~~ 78 (90)
T 2he4_A 6 RLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQ------NVEGLRHAEVVASIKAREDE 78 (90)
T ss_dssp EEEEEECBTTBCCEEEEECSSSSSEEEEEECTTSHHHHHT-CCTTCEEEEETTE------ECTTSCHHHHHHHHTTSSSE
T ss_pred EEEEEEECCCCccEEEEccCCCCCEEEEEECCCChHHHCC-CCCCCEEEEECCE------ECCCCCHHHHHHHHHcCCCc
Confidence 4566654 58899887654 589999999999999999 9999999997642 22233 5677788876778
Q ss_pred eEEEEeeccCC
Q 022783 161 LLMKMQKRYGK 171 (292)
Q Consensus 161 v~l~l~r~~~~ 171 (292)
+.|.+.|+-.+
T Consensus 79 v~l~v~r~~~~ 89 (90)
T 2he4_A 79 ARLLVVGPSTR 89 (90)
T ss_dssp EEEEEECCCCC
T ss_pred EEEEEEccCCC
Confidence 99999986543
No 173
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.30 E-value=1.7e-06 Score=77.03 Aligned_cols=63 Identities=8% Similarity=-0.017 Sum_probs=43.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCcc---chhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPE---ESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~---d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
..+.|..+.. |+|++|+..|++||++.|... ....+++|+|.+|..+|++++|+..+++|+++
T Consensus 119 ~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 119 LDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3477777766 777777777777776655321 12456777777777777777777777777765
No 174
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.30 E-value=3.7e-06 Score=72.36 Aligned_cols=68 Identities=16% Similarity=0.168 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
...+..|..+...|+|++|+..|+++++++|+. ..+|+++|.+|..+|++++|+..+++|++...++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~ 222 (359)
T 3ieg_A 155 ELRELRAECFIKEGEPRKAISDLKAASKLKSDN---TEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHK 222 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccch
Confidence 345699999999999999999999999999974 46799999999999999999999999999977654
No 175
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.29 E-value=2.8e-06 Score=69.12 Aligned_cols=77 Identities=17% Similarity=0.089 Sum_probs=62.9
Q ss_pred HhhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 022783 203 QNYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALL 280 (292)
Q Consensus 203 a~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIe 280 (292)
..|.+.....+.. .-.+++|..+...|+|++|+..|+++|+.+|++.+ ..+|+|++.+|..+|+.++|+.++.++|.
T Consensus 95 ~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~-~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 95 KRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQD-GEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTT-THHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccCh-HHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 3455544444443 44579999999999999999999999999997533 34799999999999999999999999985
No 176
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.29 E-value=2.6e-06 Score=68.24 Aligned_cols=82 Identities=23% Similarity=0.412 Sum_probs=61.9
Q ss_pred ccceEEEEecC---CceeEEeeeC-------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHH
Q 022783 83 KYEEYEVEIEQ---PYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMY 152 (292)
Q Consensus 83 ~~~~~~v~l~K---PlGl~~~~~~-------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ 152 (292)
+.+..+|+|.| ++|+.+..+. +.+++|..|.++|.|+++|.|++||+|+++.. ..+ ......++..
T Consensus 22 ~~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng---~~v-~~~~~~~~~~ 97 (117)
T 2byg_A 22 SMTVVEIKLFKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNN---YSL-EEVTHEEAVA 97 (117)
T ss_dssp EEEEEEEEEECBTTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETT---EEC-TTCCHHHHHH
T ss_pred CCceEEEEEEeCCCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC---EEC-CCCCHHHHHH
Confidence 33456677754 7899998653 35899999999999999999999999999763 111 1124556778
Q ss_pred HhhccCCceEEEEeec
Q 022783 153 TIRQRVGPLLMKMQKR 168 (292)
Q Consensus 153 ai~~r~g~v~l~l~r~ 168 (292)
.|+.....|.|++.|.
T Consensus 98 ~l~~~g~~v~l~v~R~ 113 (117)
T 2byg_A 98 ILKNTSEVVYLKVGKP 113 (117)
T ss_dssp HHHTCCSEEEEEEEEE
T ss_pred HHHcCCCeEEEEEEeC
Confidence 8886667889999885
No 177
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.29 E-value=2.6e-06 Score=66.89 Aligned_cols=81 Identities=12% Similarity=0.201 Sum_probs=61.4
Q ss_pred eEEEEec---CCceeEEeeeC------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc
Q 022783 86 EYEVEIE---QPYGLKFAKGR------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (292)
Q Consensus 86 ~~~v~l~---KPlGl~~~~~~------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~ 156 (292)
..+|+|. ++||+.+..+. +.+++|..|.+++.|+++|.|++||+|+++-. ..+ ....+.++...|+.
T Consensus 16 ~~~v~l~k~~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng---~~v-~~~~~~~~~~~l~~ 91 (108)
T 2d92_A 16 VKIVELVKDCKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNE---YCL-DNTSLAEAVEILKA 91 (108)
T ss_dssp CEEEEEEECSSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESS---CBC-TTCCHHHHHHHHHH
T ss_pred eEEEEEEECCCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHHh
Confidence 3556654 47999997653 45899999999999999999999999999863 222 12345577888887
Q ss_pred c-CCceEEEEeeccC
Q 022783 157 R-VGPLLMKMQKRYG 170 (292)
Q Consensus 157 r-~g~v~l~l~r~~~ 170 (292)
. .+.|.|++.|+..
T Consensus 92 ~~~~~v~l~v~R~~~ 106 (108)
T 2d92_A 92 VPPGLVHLGICSGPS 106 (108)
T ss_dssp SCSEEEEEEEECCCC
T ss_pred CCCCeEEEEEEcCCC
Confidence 4 5689999999753
No 178
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.29 E-value=6.4e-06 Score=65.25 Aligned_cols=83 Identities=23% Similarity=0.371 Sum_probs=62.5
Q ss_pred ceEEEEecC----CceeEEeeeCC-----------CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhh
Q 022783 85 EEYEVEIEQ----PYGLKFAKGRD-----------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR 149 (292)
Q Consensus 85 ~~~~v~l~K----PlGl~~~~~~~-----------G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~ 149 (292)
..++|+|.| +||+.+..+.+ .+++|..|.+++.|+++|.|++||+|+.+.. ..+-. ..+-+
T Consensus 15 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng---~~v~~-~~~~~ 90 (117)
T 2ehr_A 15 PPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSG---VDLQN-ASHSE 90 (117)
T ss_dssp CCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESS---CBCTT-CCHHH
T ss_pred CCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECC---EECCC-CCHHH
Confidence 446777765 58888866542 5999999999999999999999999999763 22211 22446
Q ss_pred HHHHhhccCCceEEEEeeccCC
Q 022783 150 TMYTIRQRVGPLLMKMQKRYGK 171 (292)
Q Consensus 150 ~~~ai~~r~g~v~l~l~r~~~~ 171 (292)
++..|+....++.|++.|.-..
T Consensus 91 ~~~~~~~~g~~v~l~v~r~~~~ 112 (117)
T 2ehr_A 91 AVEAIKNAGNPVVFIVQSLSST 112 (117)
T ss_dssp HHHHHHTSCSSEEEEECCBSCC
T ss_pred HHHHHHcCCCeEEEEEEECCCC
Confidence 7778887677899999887654
No 179
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.29 E-value=3.6e-06 Score=64.80 Aligned_cols=81 Identities=23% Similarity=0.415 Sum_probs=60.1
Q ss_pred ceEEEEecC---CceeEEeeeC-------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHh
Q 022783 85 EEYEVEIEQ---PYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (292)
Q Consensus 85 ~~~~v~l~K---PlGl~~~~~~-------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai 154 (292)
...+|+|.| ++|+.+..+. +.+++|..|.+++.|+++|.|++||+|+++-. ..+ ......++...+
T Consensus 7 ~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng---~~v-~~~~~~~~~~~~ 82 (101)
T 2jik_A 7 TEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNG---QDL-KNLLHQDAVDLF 82 (101)
T ss_dssp EEEEEEEECCTTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETT---EEC-SSCCHHHHHHHH
T ss_pred ccEEEEEEeCCCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECC---EEC-CCCCHHHHHHHH
Confidence 456777765 7899998763 35999999999999999999999999999763 212 111234566677
Q ss_pred hccCCceEEEEeecc
Q 022783 155 RQRVGPLLMKMQKRY 169 (292)
Q Consensus 155 ~~r~g~v~l~l~r~~ 169 (292)
+.....+.|++.|..
T Consensus 83 ~~~g~~v~l~v~R~~ 97 (101)
T 2jik_A 83 RNAGYAVSLRVQHRL 97 (101)
T ss_dssp HTCCSEEEEEEEEES
T ss_pred HhCCCeEEEEEEeCC
Confidence 655567899998853
No 180
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.29 E-value=2.4e-06 Score=75.03 Aligned_cols=65 Identities=15% Similarity=0.090 Sum_probs=55.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHc----CCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLG----SKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALe----ldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
..+.|..++..|+|++|+..|++||+ ...+......+|+|+|.+|.++|++++|++.+++|+++-
T Consensus 158 ~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~ 226 (293)
T 3u3w_A 158 ENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 45999999999999999999999994 212222446689999999999999999999999998863
No 181
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.29 E-value=2.3e-06 Score=68.77 Aligned_cols=69 Identities=14% Similarity=0.095 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHH-HHhcCCH--HHHHHHHHHHHHhCccChh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACC-YSKLNQV--KAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Acc-yakLgq~--eeALe~LekAIelG~~Df~ 287 (292)
..++..|..++..|+|++|+..|+++++++|++ ..+|+++|.+ |..+|++ ++|+..+++|+++...+..
T Consensus 45 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~ 116 (177)
T 2e2e_A 45 EQWALLGEYYLWQNDYSNSLLAYRQALQLRGEN---AELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEIT 116 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSC---HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHH
Confidence 445699999999999999999999999999974 4579999999 8899999 9999999999999876543
No 182
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.29 E-value=3.7e-06 Score=65.78 Aligned_cols=80 Identities=25% Similarity=0.461 Sum_probs=61.1
Q ss_pred ceEEEEecC---CceeEEeeeC-----CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc
Q 022783 85 EEYEVEIEQ---PYGLKFAKGR-----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (292)
Q Consensus 85 ~~~~v~l~K---PlGl~~~~~~-----~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~ 156 (292)
+.++|+|.| ++|+.+..+. +.+++|..|.+++.|+++|.|++||+|+.+.. ..+ .....-++...++.
T Consensus 8 ~~~~v~l~~~~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng---~~v-~~~~~~~~~~~~~~ 83 (110)
T 1um1_A 8 YVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNG---SSL-LGLGYLRAVDLIRH 83 (110)
T ss_dssp CEEEEEEECCTTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESS---CBC-SSCCHHHHHHHHHT
T ss_pred cEEEEEEEECCCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHHc
Confidence 668888865 5999997753 34899999999999999999999999999763 222 11234456667776
Q ss_pred cCCceEEEEeec
Q 022783 157 RVGPLLMKMQKR 168 (292)
Q Consensus 157 r~g~v~l~l~r~ 168 (292)
...++.|++.|.
T Consensus 84 ~~~~v~l~v~R~ 95 (110)
T 1um1_A 84 GGKKMRFLVAKS 95 (110)
T ss_dssp CCSEEEEEEECC
T ss_pred CCCeEEEEEEeC
Confidence 667889999984
No 183
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.29 E-value=1.6e-06 Score=68.45 Aligned_cols=85 Identities=19% Similarity=0.358 Sum_probs=64.3
Q ss_pred ceEEEEec---CCceeEEeeeCC---CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccC
Q 022783 85 EEYEVEIE---QPYGLKFAKGRD---GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV 158 (292)
Q Consensus 85 ~~~~v~l~---KPlGl~~~~~~~---G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~ 158 (292)
+.++|+|. .+||+.+..+.+ ++++|..|.+++.|+++|.|++||+|+++.. ..+ ....+.+++..|+...
T Consensus 17 ~~~~v~l~~~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng---~~v-~~~~~~~~~~~l~~~~ 92 (116)
T 2dm8_A 17 QEMIIEISKGRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNG---VDL-RNSSHEEAITALRQTP 92 (116)
T ss_dssp SCEEEEEECCSSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETT---EEC-SSSCHHHHHHHHHTCC
T ss_pred CEEEEEEEECCCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHHhCC
Confidence 45777775 478999987655 6999999999999999999999999999763 222 1112456677777666
Q ss_pred CceEEEEeeccCCcc
Q 022783 159 GPLLMKMQKRYGKME 173 (292)
Q Consensus 159 g~v~l~l~r~~~~~~ 173 (292)
.+|.|++.|.-..+.
T Consensus 93 ~~v~l~v~R~~~~~~ 107 (116)
T 2dm8_A 93 QKVRLVVYRDEAHYR 107 (116)
T ss_dssp SEEEEEEECCSSCCC
T ss_pred CeEEEEEEeCCcccc
Confidence 889999998665543
No 184
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.28 E-value=9.5e-07 Score=69.95 Aligned_cols=83 Identities=14% Similarity=0.268 Sum_probs=63.9
Q ss_pred cceEEEEecCC----ceeEEeeeC-----CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHh
Q 022783 84 YEEYEVEIEQP----YGLKFAKGR-----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (292)
Q Consensus 84 ~~~~~v~l~KP----lGl~~~~~~-----~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai 154 (292)
...+.|+|.|+ ||+.+..+. +.+++|..|.++|.|+++|.|++||+|+++.. ..+.....+.++..+|
T Consensus 19 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing---~~v~~~~~~~~~~~~l 95 (117)
T 2o2t_A 19 RHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAING---QALDQTITHQQAISIL 95 (117)
T ss_dssp SCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETT---EECCTTSCHHHHHHHH
T ss_pred CeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECC---EECCCCCCHHHHHHHH
Confidence 35688888886 788887653 34899999999999999999999999999863 2222122556677788
Q ss_pred hccCCceEEEEeecc
Q 022783 155 RQRVGPLLMKMQKRY 169 (292)
Q Consensus 155 ~~r~g~v~l~l~r~~ 169 (292)
+.....|.|.+.|..
T Consensus 96 ~~~~~~v~l~v~R~~ 110 (117)
T 2o2t_A 96 QKAKDTVQLVIARGS 110 (117)
T ss_dssp HHCCSEEEEEEESSC
T ss_pred HcCCCEEEEEEEeCC
Confidence 776678899999864
No 185
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.28 E-value=4.6e-06 Score=69.57 Aligned_cols=67 Identities=10% Similarity=-0.054 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 217 QDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 217 ~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
..+.+|..+++.|+|++|+..|+++++.+|+. ..+++.++.+|..+|++++|+..+++++++..++.
T Consensus 177 ~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~p~~~ 243 (252)
T 2ho1_A 177 VALEMADLLYKEREYVPARQYYDLFAQGGGQN---ARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGSL 243 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCc---HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCH
Confidence 34577777777777777777777777777753 34577777777777777777777777777765543
No 186
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.28 E-value=3.5e-06 Score=81.71 Aligned_cols=64 Identities=14% Similarity=0.018 Sum_probs=58.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHc-----CCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLG-----SKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALe-----ldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
+-++|.+|..+|+|++|+..|+++|+ +-|+.++.+..++|+|..|..+|++++|+..+++|+++
T Consensus 343 ~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 343 MYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 34999999999999999999999995 55666788899999999999999999999999999876
No 187
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.27 E-value=1.9e-06 Score=66.73 Aligned_cols=82 Identities=22% Similarity=0.356 Sum_probs=60.8
Q ss_pred ccceEEEEecC---CceeEEeeeC----CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhh
Q 022783 83 KYEEYEVEIEQ---PYGLKFAKGR----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIR 155 (292)
Q Consensus 83 ~~~~~~v~l~K---PlGl~~~~~~----~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~ 155 (292)
..+.++|+|.| ++|+.+..+. +++++|..|.+++.|+++|.|++||+|+++-. ..+-. ..+.+++..++
T Consensus 9 ~~~~~~v~l~~~~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng---~~v~~-~~~~~~~~~~~ 84 (104)
T 2djt_A 9 ASGHFSVELVRGYAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHING---ESTQG-LTHAQAVERIR 84 (104)
T ss_dssp CCCCEEEEEECCSSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETT---EECTT-CCHHHHHHHHH
T ss_pred CCceEEEEEEeCCCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC---EECCC-CCHHHHHHHHH
Confidence 34668888864 6788887642 56899999999999999999999999999763 22211 12455666777
Q ss_pred ccCCceEEEEeec
Q 022783 156 QRVGPLLMKMQKR 168 (292)
Q Consensus 156 ~r~g~v~l~l~r~ 168 (292)
....+|.|++.|.
T Consensus 85 ~~g~~v~l~v~R~ 97 (104)
T 2djt_A 85 AGGPQLHLVIRRP 97 (104)
T ss_dssp HTCSEEEEEECCC
T ss_pred cCCCeEEEEEEEC
Confidence 6556789999885
No 188
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.27 E-value=2.4e-06 Score=69.34 Aligned_cols=82 Identities=22% Similarity=0.417 Sum_probs=61.4
Q ss_pred ceEEEEec-C---CceeEEeeeCC------CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHh
Q 022783 85 EEYEVEIE-Q---PYGLKFAKGRD------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (292)
Q Consensus 85 ~~~~v~l~-K---PlGl~~~~~~~------G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai 154 (292)
..++|+|. + +||+.+..+.+ .++||..|.++|.|+++|.|++||+|+++-. ..+ ....+.+++..|
T Consensus 25 ~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng---~~v-~~~~~~~~~~~l 100 (127)
T 1wg6_A 25 LTLEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNG---ETL-LGKSNHEAMETL 100 (127)
T ss_dssp EEEEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETT---EES-TTSCHHHHHHHH
T ss_pred eEEEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECC---EEC-CCCCHHHHHHHH
Confidence 45777776 3 69999987642 4899999999999999999999999999763 211 112344677777
Q ss_pred hcc-------CCceEEEEeeccC
Q 022783 155 RQR-------VGPLLMKMQKRYG 170 (292)
Q Consensus 155 ~~r-------~g~v~l~l~r~~~ 170 (292)
+.. .++|.|++.|..-
T Consensus 101 ~~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 101 RRSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp HHHHHHHHHHTCEEEEEEEECSC
T ss_pred HHhhccccCCCCEEEEEEEeCCC
Confidence 754 6789999998643
No 189
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.26 E-value=1.8e-06 Score=76.95 Aligned_cols=98 Identities=11% Similarity=0.017 Sum_probs=72.6
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhhHh-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccc---h
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQKER-------REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEE---S 251 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~-------~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d---~ 251 (292)
..++.|.|.+... .+.+++ .|.+...+... ..-..+.|..+.++|+|++|+..|++++++.|+... .
T Consensus 116 a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 194 (307)
T 2ifu_A 116 AMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTC 194 (307)
T ss_dssp HHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHH
Confidence 3456666666655 555554 55554444332 123459999999999999999999999987664322 2
Q ss_pred hHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 252 SVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 252 a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
..++++++.||..+|++++|+.++++|+ +..
T Consensus 195 ~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p 225 (307)
T 2ifu_A 195 YKKCIAQVLVQLHRADYVAAQKCVRESY-SIP 225 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHT-TST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCC
Confidence 4579999999999999999999999999 643
No 190
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.26 E-value=4e-06 Score=63.47 Aligned_cols=80 Identities=26% Similarity=0.468 Sum_probs=59.0
Q ss_pred ceEEEEecC---CceeEEeeeC-------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHh
Q 022783 85 EEYEVEIEQ---PYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (292)
Q Consensus 85 ~~~~v~l~K---PlGl~~~~~~-------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai 154 (292)
+.++|+|.| ++|+.+..+. +.+++|..|.+++.|+++|.|++||+|+++... .+ .......+...+
T Consensus 3 ~~~~v~l~k~~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~---~v-~~~~~~~~~~~~ 78 (94)
T 2fe5_A 3 TIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNT---NL-QDVRHEEAVASL 78 (94)
T ss_dssp CEEEEEEECCTTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTE---EC-TTCBHHHHHHHH
T ss_pred EEEEEEEEECCCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE---EC-CCCCHHHHHHHH
Confidence 346677754 6999997642 348999999999999999999999999997631 11 111344566777
Q ss_pred hccCCceEEEEeec
Q 022783 155 RQRVGPLLMKMQKR 168 (292)
Q Consensus 155 ~~r~g~v~l~l~r~ 168 (292)
+...+++.|++.|.
T Consensus 79 ~~~~~~v~l~v~R~ 92 (94)
T 2fe5_A 79 KNTSDMVYLKVAKP 92 (94)
T ss_dssp HTCCSEEEEEEECC
T ss_pred HcCCCeEEEEEEcC
Confidence 76667889999874
No 191
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.26 E-value=3.8e-06 Score=64.88 Aligned_cols=81 Identities=21% Similarity=0.328 Sum_probs=61.6
Q ss_pred eEEEEecCC---ceeEEeeeC-CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCce
Q 022783 86 EYEVEIEQP---YGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL 161 (292)
Q Consensus 86 ~~~v~l~KP---lGl~~~~~~-~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v 161 (292)
...|+|.|. +|+.+.... ..+++|..|.+++.|+++| |++||+|+.+.. ..+-.. .+.++...|+....++
T Consensus 7 ~r~v~l~k~~~g~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing---~~v~~~-~~~~~~~~l~~~g~~v 81 (102)
T 2d90_A 7 GRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNG---KSVEAL-DHDGVVEMIRKGGDQT 81 (102)
T ss_dssp SEEEEEECCSSSSSCEEEECSSSSSEEEECCCTTSTTTTTT-CCTTCEEEEESS---CBCTTS-CHHHHHHHHHHSTTEE
T ss_pred CEEEEEeeCCCCccEEEEeecCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECC---EECCCC-CHHHHHHHHHcCCCEE
Confidence 367777775 899998754 4599999999999999999 999999999763 222111 2456677777666789
Q ss_pred EEEEeeccCC
Q 022783 162 LMKMQKRYGK 171 (292)
Q Consensus 162 ~l~l~r~~~~ 171 (292)
.|++.|+-+.
T Consensus 82 ~l~v~r~~~~ 91 (102)
T 2d90_A 82 TLLVLDKEAE 91 (102)
T ss_dssp EEEECSTTCC
T ss_pred EEEEEECCCc
Confidence 9999887665
No 192
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.26 E-value=1.8e-06 Score=67.07 Aligned_cols=83 Identities=18% Similarity=0.393 Sum_probs=63.1
Q ss_pred ccceEEEEecC---CceeEEeeeC--CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhcc
Q 022783 83 KYEEYEVEIEQ---PYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR 157 (292)
Q Consensus 83 ~~~~~~v~l~K---PlGl~~~~~~--~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r 157 (292)
.++.++|+|.| ++|+.+..+. +.+++|..|.+++.|+++|.|++||+|+++-. ..+ ....+.+++..|+..
T Consensus 7 ~~~~~~v~l~~~~~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing---~~v-~~~~~~~~~~~l~~~ 82 (103)
T 1uep_A 7 GYKELDVHLRRMESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDG---IPV-AGKTHRYVIDLMHHA 82 (103)
T ss_dssp SEEEECCEEESSSSSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETT---EEC-TTSCHHHHHHHHHHH
T ss_pred CceEEEEEEEeCCCccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHHhC
Confidence 45667778876 5888887653 45899999999999999999999999999763 222 112355677778765
Q ss_pred --CCceEEEEeecc
Q 022783 158 --VGPLLMKMQKRY 169 (292)
Q Consensus 158 --~g~v~l~l~r~~ 169 (292)
...|.|++.|..
T Consensus 83 ~~g~~v~l~v~R~~ 96 (103)
T 1uep_A 83 ARNGQVNLTVRRKV 96 (103)
T ss_dssp HHHTEEEEEEEEEC
T ss_pred CCCCcEEEEEEeCC
Confidence 578999999864
No 193
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.26 E-value=3.1e-06 Score=76.71 Aligned_cols=97 Identities=12% Similarity=0.041 Sum_probs=73.4
Q ss_pred HHHHhhccccchhhHHHHHHH--hhHHHHHhhHh-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHc-----CCCCc
Q 022783 183 IIRAERNSGVISNRVREIQMQ--NYMKKKEQKER-------REQDLREGLQLYRTGKYEVAREKFESVLG-----SKPTP 248 (292)
Q Consensus 183 ~~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~-------~~~~~n~G~~L~k~gdYeeAIe~fekALe-----ldP~~ 248 (292)
...++.|.|.+...+++..++ .|.++..+..+ .....++|..+...|+|++|+..|++|++ .+|.
T Consensus 181 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~- 259 (378)
T 3q15_A 181 TIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL- 259 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG-
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh-
Confidence 355666777777766666665 34333332211 12345999999999999999999999998 6664
Q ss_pred cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 249 EESSVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 249 ~d~a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
...+++|+|.+|.++|++++|+..+++|+++-
T Consensus 260 --~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 291 (378)
T 3q15_A 260 --LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHI 291 (378)
T ss_dssp --HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999874
No 194
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.26 E-value=3.2e-06 Score=71.70 Aligned_cols=66 Identities=18% Similarity=0.107 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCC-----CCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSK-----PTPEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeld-----P~~~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
.....+|..++..|+|++|+..|++++++. ++......+++++|.+|..+|++++|+..+++|+++
T Consensus 70 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 140 (311)
T 3nf1_A 70 TMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEI 140 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 344699999999999999999999999763 333355678999999999999999999999999987
No 195
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.26 E-value=2e-06 Score=63.96 Aligned_cols=78 Identities=23% Similarity=0.366 Sum_probs=56.0
Q ss_pred eEEEEecC--CceeEEeeeC--CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCce
Q 022783 86 EYEVEIEQ--PYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL 161 (292)
Q Consensus 86 ~~~v~l~K--PlGl~~~~~~--~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v 161 (292)
.+.|+|.+ |+|+.+..+. +.+++|..|.|++.|+++| |++||+|+.+.. ..+-.. .+.++...++...+++
T Consensus 2 ~~~v~l~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng---~~v~~~-~~~~~~~~~~~~~~~v 76 (85)
T 1rgw_A 2 AYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQ-LSQGDLVVAIDG---VNTDTM-THLEAQNKIKSASYNL 76 (85)
T ss_dssp EEEEEECCSSCCCEEECCCGGGTSCCBEEEECTTSHHHHSS-CCCCSBEEEETT---EECTTC-CHHHHHHHHTTCSSCE
T ss_pred cEEEEEeCCCccCEEEEeccCCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECC---EECCCc-CHHHHHHHHHcCCCeE
Confidence 35666655 5777776543 3479999999999999998 999999999763 222111 2345666777666779
Q ss_pred EEEEeec
Q 022783 162 LMKMQKR 168 (292)
Q Consensus 162 ~l~l~r~ 168 (292)
.|++.|.
T Consensus 77 ~l~v~R~ 83 (85)
T 1rgw_A 77 SLTLQKS 83 (85)
T ss_dssp EEEEESC
T ss_pred EEEEEeC
Confidence 9999874
No 196
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.26 E-value=2.6e-06 Score=68.66 Aligned_cols=85 Identities=18% Similarity=0.283 Sum_probs=64.1
Q ss_pred ceEEEEecC----CceeEEeeeCC-----CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhh
Q 022783 85 EEYEVEIEQ----PYGLKFAKGRD-----GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIR 155 (292)
Q Consensus 85 ~~~~v~l~K----PlGl~~~~~~~-----G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~ 155 (292)
+..+|+|.| +||+.+..+.+ .++||..|.+++.|+++|.|++||+|+.+. |..+.....+.+++..|+
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~in---g~~v~~~~~~~~~~~~l~ 101 (128)
T 2db5_A 25 QIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAIN---HTPLDQNISHQQAIALLQ 101 (128)
T ss_dssp EEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEES---SCBCSTTSCHHHHHHHHH
T ss_pred ceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEEC---CEECCCCCCHHHHHHHHH
Confidence 456666665 57888865533 289999999999999999999999999976 333321335667788888
Q ss_pred ccCCceEEEEeeccCCc
Q 022783 156 QRVGPLLMKMQKRYGKM 172 (292)
Q Consensus 156 ~r~g~v~l~l~r~~~~~ 172 (292)
.....|.|++.|.....
T Consensus 102 ~~~~~v~l~v~r~~~~~ 118 (128)
T 2db5_A 102 QTTGSLRLIVAREPVHT 118 (128)
T ss_dssp HCCSEEEEEEEECCCSS
T ss_pred cCCCeEEEEEEcCCCCC
Confidence 76678899999976543
No 197
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.25 E-value=1.4e-06 Score=66.61 Aligned_cols=77 Identities=22% Similarity=0.388 Sum_probs=60.7
Q ss_pred EEEEecC----CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceE
Q 022783 87 YEVEIEQ----PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (292)
Q Consensus 87 ~~v~l~K----PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~ 162 (292)
..|+|.| +||+.+.. .+++++|..|.|++.|+++|.+++||+|+++. |..+ ...+.++...|+...+++.
T Consensus 8 r~v~l~k~~~~~lG~~i~~-~~~~v~V~~V~~~spA~~ag~L~~GD~I~~in---g~~v--~~~~~~~~~~l~~~~~~v~ 81 (91)
T 2e7k_A 8 RMVGIRKTAGEHLGVTFRV-EGGELVIARILHGGMVAQQGLLHVGDIIKEVN---GQPV--GSDPRALQELLRNASGSVI 81 (91)
T ss_dssp CBCCBCCCTTCCCCEEEEE-SSSSEEEEEECSSSHHHHHCCCCTTCEEEEET---TEEC--TTCHHHHHHHHHTCCSSBC
T ss_pred EEEEEEECCCCcEeEEEEe-cCCCEEEEEECCCCHHHHcCCCCCCCEEEEEC---CEEC--CCCHHHHHHHHHcCCCeEE
Confidence 3466654 79999987 46799999999999999998899999999986 3334 2455667778887678899
Q ss_pred EEEeecc
Q 022783 163 MKMQKRY 169 (292)
Q Consensus 163 l~l~r~~ 169 (292)
|++.|.+
T Consensus 82 l~v~~~~ 88 (91)
T 2e7k_A 82 LKILSGP 88 (91)
T ss_dssp EEEECCS
T ss_pred EEEEECC
Confidence 9988753
No 198
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.25 E-value=2.1e-06 Score=68.86 Aligned_cols=80 Identities=15% Similarity=0.335 Sum_probs=62.0
Q ss_pred ceEEEEecC---CceeEEeeeC-----CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc
Q 022783 85 EEYEVEIEQ---PYGLKFAKGR-----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (292)
Q Consensus 85 ~~~~v~l~K---PlGl~~~~~~-----~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~ 156 (292)
+..+|+|.| ++|+.+..+. +.+++|..|.|+|.|+++|.|++||+|+++.. ..+- .....++...|+.
T Consensus 25 ~~~~v~L~k~~~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng---~~v~-~~~~~~~~~~l~~ 100 (117)
T 2fne_A 25 QCKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNG---QSLE-GVTHEEAVAILKR 100 (117)
T ss_dssp EEEEEEECCBTTBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETT---EECT-TCCHHHHHHHHHH
T ss_pred ccEEEEEEeCCCcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECC---EECC-CCCHHHHHHHHHc
Confidence 456788865 6899997653 34899999999999999999999999999863 2121 1245677788887
Q ss_pred cCCceEEEEeec
Q 022783 157 RVGPLLMKMQKR 168 (292)
Q Consensus 157 r~g~v~l~l~r~ 168 (292)
..+.|.|++.|.
T Consensus 101 ~~~~v~l~v~R~ 112 (117)
T 2fne_A 101 TKGTVTLMVLSS 112 (117)
T ss_dssp CCSSEEEEEEEC
T ss_pred CCCeEEEEEEeC
Confidence 778899999885
No 199
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.25 E-value=3.5e-06 Score=67.64 Aligned_cols=83 Identities=19% Similarity=0.315 Sum_probs=62.2
Q ss_pred cceEEEEecC---CceeEEeeeCC---CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhcc
Q 022783 84 YEEYEVEIEQ---PYGLKFAKGRD---GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR 157 (292)
Q Consensus 84 ~~~~~v~l~K---PlGl~~~~~~~---G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r 157 (292)
.+.++|+|.| +||+.+..+.+ .+++|..|.|++.|+++|.|++||+|+++.. ..+-. ...-+++..++..
T Consensus 24 ~~~~~v~l~k~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing---~~v~~-~~~~~~~~~~~~~ 99 (124)
T 2daz_A 24 GELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINN---QILYG-RSHQNASAIIKTA 99 (124)
T ss_dssp SEEEEEEEECCSSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESS---CBCTT-SCHHHHHHHHHHS
T ss_pred CceEEEEEEeCCCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECC---EECCC-CCHHHHHHHHHcC
Confidence 3557888876 78999987643 5999999999999999999999999999763 22211 1233456677766
Q ss_pred CCceEEEEeeccC
Q 022783 158 VGPLLMKMQKRYG 170 (292)
Q Consensus 158 ~g~v~l~l~r~~~ 170 (292)
.++|.|++.|.-.
T Consensus 100 ~~~v~l~v~R~~~ 112 (124)
T 2daz_A 100 PSKVKLVFIRNED 112 (124)
T ss_dssp CSEEEEEEEECTT
T ss_pred CCeEEEEEEeCCC
Confidence 6789999998543
No 200
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.24 E-value=3.6e-06 Score=77.02 Aligned_cols=63 Identities=14% Similarity=-0.031 Sum_probs=54.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHcCCCC------ccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 219 LREGLQLYRTGKYEVAREKFESVLGSKPT------PEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 219 ~n~G~~L~k~gdYeeAIe~fekALeldP~------~~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
-.+|.+++..|+|++|++.|++|+++.+. ......+|+|+|.+|..+|++++|+..+++|+++
T Consensus 55 n~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i 123 (472)
T 4g1t_A 55 NLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHV 123 (472)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 37899999999999999999999976221 1134678999999999999999999999999886
No 201
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.24 E-value=8.3e-06 Score=69.62 Aligned_cols=90 Identities=12% Similarity=0.069 Sum_probs=69.7
Q ss_pred hhhHHHHHHH--hhHHHHHhhHh-HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHH
Q 022783 194 SNRVREIQMQ--NYMKKKEQKER-REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKA 270 (292)
Q Consensus 194 ~~~l~eiqea--~Y~kkk~lk~~-~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~ee 270 (292)
....+..+++ .|.+.....+. ....+..|..+++.|+|++|+..|+++++++|+. ..+|+++|.+|..+|++++
T Consensus 148 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~ 224 (327)
T 3cv0_A 148 FAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDD---AQLWNKLGATLANGNRPQE 224 (327)
T ss_dssp TTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHH
T ss_pred HHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc---HHHHHHHHHHHHHcCCHHH
Confidence 3344444443 33333333332 2445699999999999999999999999999973 4679999999999999999
Q ss_pred HHHHHHHHHHhCccCh
Q 022783 271 GLSALEDALLAGYEDF 286 (292)
Q Consensus 271 ALe~LekAIelG~~Df 286 (292)
|+..+++|+++..++.
T Consensus 225 A~~~~~~a~~~~~~~~ 240 (327)
T 3cv0_A 225 ALDAYNRALDINPGYV 240 (327)
T ss_dssp HHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHcCCCCH
Confidence 9999999999976643
No 202
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.23 E-value=4.4e-06 Score=64.97 Aligned_cols=86 Identities=19% Similarity=0.329 Sum_probs=60.8
Q ss_pred cccceEEEEec--CCceeEEeee-----CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHh
Q 022783 82 EKYEEYEVEIE--QPYGLKFAKG-----RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (292)
Q Consensus 82 ~~~~~~~v~l~--KPlGl~~~~~-----~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai 154 (292)
.+.+.++|+|+ .++|+.+..+ .+.+++|..|.+++.|+++|.|++||+|+.+... .+ .....-++...+
T Consensus 8 ~~~~~~~v~l~~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~---~v-~~~~~~~~~~~~ 83 (106)
T 3axa_A 8 KEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGR---SL-VGLSQERAAELM 83 (106)
T ss_dssp --CCEEEEEEECSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTE---EC-TTCCHHHHHHHH
T ss_pred CCceEEEEEECCCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---EC-CCCCHHHHHHHH
Confidence 34466777773 3577888653 3458999999999999999999999999997632 11 112344566677
Q ss_pred hccCCceEEEEeeccCC
Q 022783 155 RQRVGPLLMKMQKRYGK 171 (292)
Q Consensus 155 ~~r~g~v~l~l~r~~~~ 171 (292)
+....++.|++.|.-..
T Consensus 84 ~~~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 84 TRTSSVVTLEVAKQGAI 100 (106)
T ss_dssp HTCCSEEEEEEECCCSS
T ss_pred HcCCCeEEEEEEeCCcc
Confidence 76666889999986443
No 203
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.23 E-value=2.4e-06 Score=67.23 Aligned_cols=84 Identities=20% Similarity=0.377 Sum_probs=62.8
Q ss_pred cceEEEEecC---CceeEEee---e-----CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHH
Q 022783 84 YEEYEVEIEQ---PYGLKFAK---G-----RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMY 152 (292)
Q Consensus 84 ~~~~~v~l~K---PlGl~~~~---~-----~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ 152 (292)
.+.++|+|.| +||+.+.. + .+.+++|..|.|+|.|+++|.|++||+|+++.. ..+-. ...-++..
T Consensus 3 ~~~~~v~l~k~~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng---~~v~~-~~~~~~~~ 78 (113)
T 2g5m_B 3 MELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDG---TSLVG-VTQSFAAS 78 (113)
T ss_dssp CEEEEEECCCCSSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETT---EECSS-CCHHHHHH
T ss_pred eEEEEEEEEeCCCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC---EECCC-CCHHHHHH
Confidence 4567888864 58999887 2 345999999999999999999999999999763 22211 12445666
Q ss_pred HhhccCCceEEEEeeccCC
Q 022783 153 TIRQRVGPLLMKMQKRYGK 171 (292)
Q Consensus 153 ai~~r~g~v~l~l~r~~~~ 171 (292)
+++....++.|.+.|.--.
T Consensus 79 ~~~~~g~~v~l~v~R~~~~ 97 (113)
T 2g5m_B 79 VLRNTKGRVRFMIGRERPG 97 (113)
T ss_dssp HHHHSCSSCEEEEEECCCC
T ss_pred HHhcCCCeEEEEEEeCCCC
Confidence 7776678899999986543
No 204
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.23 E-value=3.2e-06 Score=79.58 Aligned_cols=67 Identities=12% Similarity=0.095 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 217 QDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 217 ~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
.+..+|..+.+.|++++|++.|+++++++|++ ..+|++++.+|..+|++++|++.+++++++..++-
T Consensus 518 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~ 584 (597)
T 2xpi_A 518 TWANLGHAYRKLKMYDAAIDALNQGLLLSTND---ANVHTAIALVYLHKKIPGLAITHLHESLAISPNEI 584 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh
Confidence 44689999999999999999999999999863 45799999999999999999999999999987653
No 205
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.22 E-value=2.4e-06 Score=77.25 Aligned_cols=93 Identities=11% Similarity=0.087 Sum_probs=71.3
Q ss_pred HhhccccchhhHHHHHHHhhHHHHHhhHh-HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHh
Q 022783 186 AERNSGVISNRVREIQMQNYMKKKEQKER-REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSK 264 (292)
Q Consensus 186 a~rN~GvI~~~l~eiqea~Y~kkk~lk~~-~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accyak 264 (292)
.++..|.+..++..++ +.....+. ...++.+|..++..|+|++|+..|+++++++|+. ..+|+++|.+|..
T Consensus 35 ~~~~~g~~~~A~~~~~-----~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~l~~~~~~ 106 (450)
T 2y4t_A 35 KLLAAGQLADALSQFH-----AAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDF---TAARLQRGHLLLK 106 (450)
T ss_dssp HHHHTTCHHHHHHHHH-----HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHH-----HHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc---HHHHHHHHHHHHH
Confidence 3445555544433333 33332222 3445699999999999999999999999999974 5679999999999
Q ss_pred cCCHHHHHHHHHHHHHhCccCh
Q 022783 265 LNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 265 Lgq~eeALe~LekAIelG~~Df 286 (292)
+|++++|+..+++++++..++.
T Consensus 107 ~g~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 107 QGKLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp TTCHHHHHHHHHHHHTSCCCHH
T ss_pred cCCHHHHHHHHHHHHhcCCCCh
Confidence 9999999999999999876543
No 206
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.22 E-value=4.1e-06 Score=69.33 Aligned_cols=86 Identities=20% Similarity=0.310 Sum_probs=61.8
Q ss_pred cccccceEEEEecC-------CceeEEeeeC--------------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccC
Q 022783 80 QEEKYEEYEVEIEQ-------PYGLKFAKGR--------------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFG 138 (292)
Q Consensus 80 ~~~~~~~~~v~l~K-------PlGl~~~~~~--------------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg 138 (292)
..+....+.|+|.| +||+.+..+. +.+++|..|.|++.|+++| |++||+|+++...
T Consensus 18 ~~~~~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~-- 94 (139)
T 2vz5_A 18 LYFQSMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGW-- 94 (139)
T ss_dssp ----CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTE--
T ss_pred ccCCCceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCE--
Confidence 33444667888888 8999986532 3699999999999999999 9999999997631
Q ss_pred cccccccchhhHHHHhhccCC-ceEEEEeeccC
Q 022783 139 TEIWPAAEYGRTMYTIRQRVG-PLLMKMQKRYG 170 (292)
Q Consensus 139 ~e~w~a~~~g~~~~ai~~r~g-~v~l~l~r~~~ 170 (292)
-.......++..+|+...| +|.|++.|.-.
T Consensus 95 --~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~ 125 (139)
T 2vz5_A 95 --DMTMVTHDQARKRLTKRSEEVVRLLVTRQSL 125 (139)
T ss_dssp --ECTTCCHHHHHHHHCCTTCSEEEEEEEECC-
T ss_pred --EcCCCCHHHHHHHHHhCCCCEEEEEEEECCE
Confidence 1111135677788887654 58999998543
No 207
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.22 E-value=2.9e-06 Score=68.28 Aligned_cols=99 Identities=11% Similarity=0.044 Sum_probs=70.8
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHh------hH--hHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCC---ccc
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQ------KE--RREQDLREGLQLYRTGKYEVAREKFESVLGSKPT---PEE 250 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~l------k~--~~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~---~~d 250 (292)
..++.+.|.+...+.+.+++ .|.+.... .. ......+.|..+...|+|++|+..|++++++.+. ...
T Consensus 66 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 145 (203)
T 3gw4_A 66 HRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVA 145 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHH
Confidence 45556666666665555554 33333332 11 1233469999999999999999999999965332 122
Q ss_pred hhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 251 SSVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 251 ~a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
...+++|+|.+|..+|++++|+..+++|+++.
T Consensus 146 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 177 (203)
T 3gw4_A 146 IACAFRGLGDLAQQEKNLLEAQQHWLRARDIF 177 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 35568999999999999999999999998873
No 208
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.21 E-value=8e-06 Score=63.88 Aligned_cols=82 Identities=24% Similarity=0.415 Sum_probs=60.6
Q ss_pred cccceEEEEecC---CceeEEeee--------CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhH
Q 022783 82 EKYEEYEVEIEQ---PYGLKFAKG--------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRT 150 (292)
Q Consensus 82 ~~~~~~~v~l~K---PlGl~~~~~--------~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~ 150 (292)
...+.+.|++.| .||+.+..+ .+.+++|..|.+++.|+++| |++||+|+.+.. ..+-....+ +.
T Consensus 12 ~~~~~~~~~l~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing---~~v~~~~~~-~~ 86 (110)
T 1x5q_A 12 IEEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNG---VALQGAEHH-EA 86 (110)
T ss_dssp CCCEEEEEEEECSSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETT---EECTTCCHH-HH
T ss_pred CCcceEEEEEecCCCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECC---EECCCcCHH-HH
Confidence 345778899877 688998754 34699999999999999999 999999999873 222222222 34
Q ss_pred HHHhhccCCceEEEEeec
Q 022783 151 MYTIRQRVGPLLMKMQKR 168 (292)
Q Consensus 151 ~~ai~~r~g~v~l~l~r~ 168 (292)
...++....+|.|++.|.
T Consensus 87 ~~~~~~~g~~v~l~v~R~ 104 (110)
T 1x5q_A 87 VEALRGAGTAVQMRVWRE 104 (110)
T ss_dssp HHHHHSCCSEEEEEEEEC
T ss_pred HHHhhCCCCeEEEEEEEC
Confidence 445555566889999985
No 209
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.21 E-value=3.4e-06 Score=64.48 Aligned_cols=78 Identities=19% Similarity=0.393 Sum_probs=58.5
Q ss_pred EEEEecC----CceeEEeeeCC--------CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHh
Q 022783 87 YEVEIEQ----PYGLKFAKGRD--------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (292)
Q Consensus 87 ~~v~l~K----PlGl~~~~~~~--------G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai 154 (292)
.+|+|.| +||+.+..+.+ .+++|..|.+++.|+++|.|++||+|+++.. ..+-.. ...++..++
T Consensus 7 ~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing---~~v~~~-~~~~~~~~l 82 (98)
T 1ihj_A 7 HMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNG---KDVRNS-TEQAVIDLI 82 (98)
T ss_dssp EEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETT---EECTTC-CHHHHHHHH
T ss_pred EEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC---EECCCC-CHHHHHHHH
Confidence 5688888 89999976532 2899999999999999999999999999763 222111 124556677
Q ss_pred hccCCceEEEEeec
Q 022783 155 RQRVGPLLMKMQKR 168 (292)
Q Consensus 155 ~~r~g~v~l~l~r~ 168 (292)
+....++.|++.|.
T Consensus 83 ~~~g~~v~l~v~R~ 96 (98)
T 1ihj_A 83 KEADFKIELEIQTF 96 (98)
T ss_dssp HHSCSEEEEEEEEC
T ss_pred hcCCCeEEEEEEeC
Confidence 76566889999884
No 210
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.21 E-value=6.4e-06 Score=65.66 Aligned_cols=86 Identities=22% Similarity=0.361 Sum_probs=63.9
Q ss_pred ccccceEEEEecC---CceeEEeeeC-------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhH
Q 022783 81 EEKYEEYEVEIEQ---PYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRT 150 (292)
Q Consensus 81 ~~~~~~~~v~l~K---PlGl~~~~~~-------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~ 150 (292)
.......+|+|.| +||+.+..+. +.+++|..|.+++.|+++|.|++||+|+.+-. ..+-.. .+-++
T Consensus 13 ~~~~~~~~v~l~r~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng---~~v~~~-~~~~~ 88 (120)
T 2eno_A 13 DYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNG---QDLKNL-LHQDA 88 (120)
T ss_dssp CEEEEEEEEEEECCSSSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETT---EECCSC-CHHHH
T ss_pred CCCCceEEEEEEECCCCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECC---EECCCC-CHHHH
Confidence 3445667788876 5899998753 45999999999999999999999999999863 222111 23366
Q ss_pred HHHhhccCCceEEEEeeccC
Q 022783 151 MYTIRQRVGPLLMKMQKRYG 170 (292)
Q Consensus 151 ~~ai~~r~g~v~l~l~r~~~ 170 (292)
...++.....|.|++.|...
T Consensus 89 ~~~~~~~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 89 VDLFRNAGYAVSLRVQHRLQ 108 (120)
T ss_dssp HHHHHHHCSEEEEEEEEEEE
T ss_pred HHHHHcCCCeEEEEEEeCCc
Confidence 67777656678999988654
No 211
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.21 E-value=8.5e-06 Score=62.01 Aligned_cols=79 Identities=22% Similarity=0.411 Sum_probs=57.3
Q ss_pred ceEEEEecC--CceeEEeeeC----------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHH
Q 022783 85 EEYEVEIEQ--PYGLKFAKGR----------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMY 152 (292)
Q Consensus 85 ~~~~v~l~K--PlGl~~~~~~----------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ 152 (292)
.+++|++.| +||+.+..+. +.+++|..|.|++.|++ | |++||+|+.+.. ..+ .....-++..
T Consensus 3 ~~~~v~l~~~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng---~~v-~~~~~~~~~~ 76 (95)
T 1mfg_A 3 MEIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANG---YSF-INIEHGQAVS 76 (95)
T ss_dssp EEEEEEEECSSSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETT---EEC-TTCBHHHHHH
T ss_pred eEEEEEECCCCCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECC---EEc-CCCCHHHHHH
Confidence 457777776 5888887643 34899999999999999 7 999999999763 212 1112334556
Q ss_pred HhhccCCceEEEEeecc
Q 022783 153 TIRQRVGPLLMKMQKRY 169 (292)
Q Consensus 153 ai~~r~g~v~l~l~r~~ 169 (292)
.++....++.|++.|..
T Consensus 77 ~~~~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 77 LLKTFQNTVELIIVREV 93 (95)
T ss_dssp HHHHCCSEEEEEEEEEC
T ss_pred HhhcCCCeEEEEEEeCC
Confidence 66655677899999864
No 212
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.20 E-value=3.5e-06 Score=72.38 Aligned_cols=81 Identities=21% Similarity=0.432 Sum_probs=63.0
Q ss_pred ccceEEEEecC---CceeEEee---e-----CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHH
Q 022783 83 KYEEYEVEIEQ---PYGLKFAK---G-----RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTM 151 (292)
Q Consensus 83 ~~~~~~v~l~K---PlGl~~~~---~-----~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~ 151 (292)
..+.++|+|.| +||+.+.. + .++++||..|.+||.|+++|.|++||+|+.+.. ..| ......++.
T Consensus 78 ~~~~~~v~l~k~~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG---~~v-~~~~~~~~~ 153 (170)
T 3egg_C 78 RLELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDG---TSL-VGVTQSFAA 153 (170)
T ss_dssp TSEEEEEEEECBTTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETT---EEC-TTBCHHHHH
T ss_pred CceEEEEEEEeCCCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECC---EEC-CCCCHHHHH
Confidence 45678888875 89999987 2 235899999999999999999999999999873 222 112334677
Q ss_pred HHhhccCCceEEEEee
Q 022783 152 YTIRQRVGPLLMKMQK 167 (292)
Q Consensus 152 ~ai~~r~g~v~l~l~r 167 (292)
..|+...+.|.|++.|
T Consensus 154 ~~l~~~g~~v~L~V~R 169 (170)
T 3egg_C 154 SVLRNTKGRVRFMIGR 169 (170)
T ss_dssp HHHHHCCSEEEEEEEE
T ss_pred HHHHcCCCEEEEEEEe
Confidence 7888777889999988
No 213
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.20 E-value=3.8e-06 Score=63.23 Aligned_cols=80 Identities=20% Similarity=0.389 Sum_probs=57.3
Q ss_pred ceEEEEecC---CceeEEeeeC--CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccC-
Q 022783 85 EEYEVEIEQ---PYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV- 158 (292)
Q Consensus 85 ~~~~v~l~K---PlGl~~~~~~--~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~- 158 (292)
++.+|+|.| ++|+.+..+. +.+++|..|.|+|.|+++|.+++||+|+.+.. ..+ ......++...|+...
T Consensus 2 ~~~~v~l~~~~~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing---~~v-~~~~~~~~~~~l~~~~~ 77 (90)
T 2q9v_A 2 MEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDG---TPV-IGKSHQLVVQLMQQAAK 77 (90)
T ss_dssp EEEEEEEECBTTBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETT---EEC-TTSCHHHHHHHHHHHHH
T ss_pred CcEEEEEEECCCccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHHhCCC
Confidence 345666654 5788887653 23699999999999999999999999999763 222 1123446667777553
Q ss_pred -CceEEEEeec
Q 022783 159 -GPLLMKMQKR 168 (292)
Q Consensus 159 -g~v~l~l~r~ 168 (292)
++|.|++.|.
T Consensus 78 ~~~v~l~v~R~ 88 (90)
T 2q9v_A 78 QGHVNLTVRQT 88 (90)
T ss_dssp HTEEEEEEEEC
T ss_pred CCeEEEEEEec
Confidence 3899999874
No 214
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.20 E-value=4.2e-06 Score=66.39 Aligned_cols=86 Identities=21% Similarity=0.374 Sum_probs=62.8
Q ss_pred ccccceEEEEecCC---ceeEEeeeCC-CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc
Q 022783 81 EEKYEEYEVEIEQP---YGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (292)
Q Consensus 81 ~~~~~~~~v~l~KP---lGl~~~~~~~-G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~ 156 (292)
+...+..+|+|.|+ ||+.+....+ .+++|..|.+++.|+++|.|++||+|+++.. ..+-... .-.+...++.
T Consensus 10 ~~~~~~~~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng---~~v~~~~-~~~~~~~~~~ 85 (119)
T 1tp5_A 10 DIPREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNG---VDLRNAS-HEQAAIALKN 85 (119)
T ss_dssp CCCCSCEEEEEECTTSCCCEEEEECGGGCCEEEEEECTTSHHHHHSCCCTTEEEEEETT---EECTTCC-HHHHHHHHHT
T ss_pred CCCCccEEEEEEECCCCccEEEecCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC---EECCCCC-HHHHHHHHHc
Confidence 34556788999875 8999987644 5999999999999999998999999999863 2221111 1234445555
Q ss_pred cCCceEEEEeeccC
Q 022783 157 RVGPLLMKMQKRYG 170 (292)
Q Consensus 157 r~g~v~l~l~r~~~ 170 (292)
...++.|.+.|+..
T Consensus 86 ~~~~v~l~v~r~~~ 99 (119)
T 1tp5_A 86 AGQTVTIIAQYKPE 99 (119)
T ss_dssp SCSEEEEEEEECHH
T ss_pred CCCeEEEEEEECCc
Confidence 56678999988654
No 215
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.19 E-value=6.1e-06 Score=63.62 Aligned_cols=81 Identities=20% Similarity=0.366 Sum_probs=60.0
Q ss_pred eEEEEecC----CceeEEeeeCC--CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCC
Q 022783 86 EYEVEIEQ----PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVG 159 (292)
Q Consensus 86 ~~~v~l~K----PlGl~~~~~~~--G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g 159 (292)
..+|+|.| +||+.+....+ .+++|..|.+++.|+++| |++||+|+.+.. ..+-... +-.++..++. ..
T Consensus 11 ~~~v~l~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing---~~v~~~~-~~~~~~~~~~-~~ 84 (100)
T 2eeh_A 11 IHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAG-LCVGDKITEVNG---LSLESTT-MGSAVKVLTS-SS 84 (100)
T ss_dssp ECCEEECCCSSSSCSEEEECCTTTTCCEEEEEECTTSHHHHHT-CCSSCEEEEETT---EECSSCC-HHHHHHHHHS-CS
T ss_pred EEEEEEEECCCCCccEEEEccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECC---EECCCCC-HHHHHHhhcC-CC
Confidence 34456643 39999987643 589999999999999999 999999999763 2222222 5667777776 68
Q ss_pred ceEEEEeeccCCc
Q 022783 160 PLLMKMQKRYGKM 172 (292)
Q Consensus 160 ~v~l~l~r~~~~~ 172 (292)
++.|++.|.--..
T Consensus 85 ~v~l~v~R~g~~p 97 (100)
T 2eeh_A 85 RLHMMVRRMGSGP 97 (100)
T ss_dssp SEEEEEEECSCCC
T ss_pred EEEEEEEECCcCC
Confidence 8999999864433
No 216
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.19 E-value=6.9e-06 Score=62.49 Aligned_cols=80 Identities=25% Similarity=0.448 Sum_probs=58.1
Q ss_pred cceEEEEecCC---ceeEEeee--------CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHH
Q 022783 84 YEEYEVEIEQP---YGLKFAKG--------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMY 152 (292)
Q Consensus 84 ~~~~~v~l~KP---lGl~~~~~--------~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ 152 (292)
++++.|++.|. ||+.+..+ .+++++|..|.|++.|+++| |++||+|+++.. ..+-....+ ..+.
T Consensus 2 ~~~~~v~~~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing---~~v~~~~~~-~~~~ 76 (97)
T 2w4f_A 2 MEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNG---VALQGAEHH-EAVE 76 (97)
T ss_dssp -CEEEEEEECBTTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETT---EECTTCCHH-HHHH
T ss_pred ceEEEEEEEeCCCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECC---EECCCcCHH-HHHH
Confidence 46688888774 78888764 34699999999999999999 999999999873 223222233 2334
Q ss_pred HhhccCCceEEEEeec
Q 022783 153 TIRQRVGPLLMKMQKR 168 (292)
Q Consensus 153 ai~~r~g~v~l~l~r~ 168 (292)
.++....++.|++.|.
T Consensus 77 ~~~~~g~~v~l~v~R~ 92 (97)
T 2w4f_A 77 ALRGAGTAVQMRVWRE 92 (97)
T ss_dssp HHHTSCSEEEEEEECC
T ss_pred HHhCCCCeEEEEEEeC
Confidence 5555566789999884
No 217
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.19 E-value=6.6e-06 Score=64.45 Aligned_cols=81 Identities=19% Similarity=0.324 Sum_probs=61.3
Q ss_pred ceEEEEecC----CceeEEeeeC-CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccc--hhhHHHHhhcc
Q 022783 85 EEYEVEIEQ----PYGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGRTMYTIRQR 157 (292)
Q Consensus 85 ~~~~v~l~K----PlGl~~~~~~-~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~--~g~~~~ai~~r 157 (292)
+.++|+|.| ++|+.+.... .++++|..|.+++.|+++|.|++||+|+++... +... +.++...|+..
T Consensus 1 n~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~------~v~~~~~~~~~~~l~~~ 74 (112)
T 1qau_A 1 NVISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDR------PLVDLSYDSALEVLRGI 74 (112)
T ss_dssp CEEEEEEECBTTTBTSEEEEECSSSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTE------ECTTSCHHHHHHHHHHS
T ss_pred CEEEEEEEcCCCCceeEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCE------ECCCCCHHHHHHHHHhC
Confidence 357888843 5999998765 349999999999999999966999999997632 2222 55667777765
Q ss_pred C-CceEEEEeeccCC
Q 022783 158 V-GPLLMKMQKRYGK 171 (292)
Q Consensus 158 ~-g~v~l~l~r~~~~ 171 (292)
. .++.|.+.|.-..
T Consensus 75 ~g~~v~l~v~R~g~~ 89 (112)
T 1qau_A 75 ASETHVVLILRGPEG 89 (112)
T ss_dssp CSSSEEEEEEECCTT
T ss_pred CCCcEEEEEEeCCcc
Confidence 4 6889999986443
No 218
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.18 E-value=7.3e-06 Score=61.03 Aligned_cols=77 Identities=10% Similarity=0.231 Sum_probs=54.5
Q ss_pred EEEEecC---CceeEEeeeCCC--CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhcc--CC
Q 022783 87 YEVEIEQ---PYGLKFAKGRDG--GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR--VG 159 (292)
Q Consensus 87 ~~v~l~K---PlGl~~~~~~~G--~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r--~g 159 (292)
++|+|.| .+|+.+..+.++ +++|..|.|++.|+++|.+++||+|+.+-.. .+ ......++..+|+.. ..
T Consensus 2 ~~v~l~k~~~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~---~v-~~~~~~~~~~~l~~~~~g~ 77 (85)
T 2i04_A 2 IHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDT---CV-LGHTHAQVVKIFQSIPIGA 77 (85)
T ss_dssp EEEEEECBTTBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTE---EC-TTCCHHHHHHHHHTSCTTC
T ss_pred EEEEEEECCCCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHHhCCCCC
Confidence 4566654 578888765443 7999999999999999999999999997632 11 111234566777754 35
Q ss_pred ceEEEEee
Q 022783 160 PLLMKMQK 167 (292)
Q Consensus 160 ~v~l~l~r 167 (292)
++.|++.|
T Consensus 78 ~v~l~v~R 85 (85)
T 2i04_A 78 SVDLELCR 85 (85)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 67888765
No 219
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.17 E-value=7.1e-06 Score=65.92 Aligned_cols=82 Identities=15% Similarity=0.351 Sum_probs=60.9
Q ss_pred ccceEEEEecC---CceeEEeeeCC-----CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHh
Q 022783 83 KYEEYEVEIEQ---PYGLKFAKGRD-----GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (292)
Q Consensus 83 ~~~~~~v~l~K---PlGl~~~~~~~-----G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai 154 (292)
..+++.|++.+ ++|+.+....+ .+++|..|.|++.|+++|.|++||+|+++... .+ ....+.++...|
T Consensus 28 ~~~~~~v~l~~~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~---~v-~~~~~~~~~~~l 103 (121)
T 2kom_A 28 IGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGV---DL-VGKSQEEVVSLL 103 (121)
T ss_dssp SCEEEEEEEECCTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTE---EC-TTSCHHHHHHHH
T ss_pred CCeEEEEEEEcCCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE---Ec-CCCCHHHHHHHH
Confidence 45678888876 57888877643 58999999999999999989999999998632 11 111245666777
Q ss_pred hcc--CCceEEEEeec
Q 022783 155 RQR--VGPLLMKMQKR 168 (292)
Q Consensus 155 ~~r--~g~v~l~l~r~ 168 (292)
+.. ..+|.|++.|.
T Consensus 104 ~~~~~g~~v~l~v~R~ 119 (121)
T 2kom_A 104 RSTKMEGTVSLLVFRQ 119 (121)
T ss_dssp HHCCSSCEEEEEEEEC
T ss_pred hcCCCCCEEEEEEEeC
Confidence 753 45789998874
No 220
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.17 E-value=2.6e-06 Score=66.01 Aligned_cols=85 Identities=20% Similarity=0.321 Sum_probs=62.7
Q ss_pred cccccceEEEEecCC---ceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc
Q 022783 80 QEEKYEEYEVEIEQP---YGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (292)
Q Consensus 80 ~~~~~~~~~v~l~KP---lGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~ 156 (292)
.+...+++.|+|.|. +|+.+.. +.+++|..|.+++.|+++| |++||+|+.+-.. .+ ....+.++...|+.
T Consensus 10 ~~~~~~~~~v~l~~~~~g~G~~~~~--~~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~---~v-~~~~~~~~~~~l~~ 82 (100)
T 1whd_A 10 DPENGEKLQITIRRGKDGFGFTICC--DSPVRVQAVDSGGPAERAG-LQQLDTVLQLNER---PV-EHWKCVELAHEIRS 82 (100)
T ss_dssp SCCCCEEEEEEEECCSSSSSCBCCC--SSSCBCCBCCTTSHHHHHT-CCSSCEEEEETTE---EC-TTCCHHHHHHHHHH
T ss_pred CccccceEEEEEECCCCeeeEEEeC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---EC-CCCCHHHHHHHHHc
Confidence 345667888888765 6666654 3689999999999999999 9999999998642 11 11134556677776
Q ss_pred cCCceEEEEeeccCC
Q 022783 157 RVGPLLMKMQKRYGK 171 (292)
Q Consensus 157 r~g~v~l~l~r~~~~ 171 (292)
..+.|.|++.|..++
T Consensus 83 ~~~~v~l~v~R~~~~ 97 (100)
T 1whd_A 83 CPSEIILLVWRVSGP 97 (100)
T ss_dssp CSSEEEEEEEECCSS
T ss_pred CCCeEEEEEEECCCC
Confidence 677799999987553
No 221
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.16 E-value=5.5e-06 Score=70.22 Aligned_cols=65 Identities=17% Similarity=0.195 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhc-C-----CHHHHHHHHHHHHHhCcc
Q 022783 216 EQDLREGLQLYR----TGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKL-N-----QVKAGLSALEDALLAGYE 284 (292)
Q Consensus 216 ~~~~n~G~~L~k----~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakL-g-----q~eeALe~LekAIelG~~ 284 (292)
...+++|..+.. .+++++|+.+|++|+++ |.+ ..++||++.+|..- | ++++|+..+++|++.|+.
T Consensus 126 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~---~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~ 200 (212)
T 3rjv_A 126 DAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRT---GYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFD 200 (212)
T ss_dssp HHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCT---THHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCC---HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCH
Confidence 444566666666 56666666666666666 321 23566666666553 2 566666666666666654
No 222
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.16 E-value=4.3e-06 Score=75.72 Aligned_cols=98 Identities=8% Similarity=0.059 Sum_probs=71.0
Q ss_pred HHHhhccccchhhHHHHHHH--hhHHHHHhhH--------hHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCC---Cccc
Q 022783 184 IRAERNSGVISNRVREIQMQ--NYMKKKEQKE--------RREQDLREGLQLYRTGKYEVAREKFESVLGSKP---TPEE 250 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~--------~~~~~~n~G~~L~k~gdYeeAIe~fekALeldP---~~~d 250 (292)
..++++.|.+...+++...+ .|.++...-. ......+.|..+...|+|++|++.|++||++.+ +...
T Consensus 141 a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~ 220 (378)
T 3q15_A 141 AEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRF 220 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 44555666665555555554 3333332211 123345999999999999999999999997643 2223
Q ss_pred hhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 251 SSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 251 ~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
...+++|+|.||..+|++++|+..+++|+++
T Consensus 221 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~ 251 (378)
T 3q15_A 221 IAISLLNIANSYDRSGDDQMAVEHFQKAAKV 251 (378)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999985
No 223
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.16 E-value=5.8e-06 Score=61.97 Aligned_cols=78 Identities=24% Similarity=0.443 Sum_probs=56.5
Q ss_pred eEEEEe--cCCceeEEeeeCC--CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCce
Q 022783 86 EYEVEI--EQPYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL 161 (292)
Q Consensus 86 ~~~v~l--~KPlGl~~~~~~~--G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v 161 (292)
.++|+| +.|+|+.+..+.+ .+++|..|.|++.|+++| |++||+|+++.. ..+-.. .+.++...++....++
T Consensus 4 ~~~v~l~~~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing---~~v~~~-~~~~~~~~~~~~g~~v 78 (88)
T 2uzc_A 4 NYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQAN-VRIGDVVLSIDG---INAQGM-THLEAQNKIKGCTGSL 78 (88)
T ss_dssp EEEEEEESSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETT---EECTTC-CHHHHHHHHHTCCSEE
T ss_pred EEEEEEcCCCcccEEEECcCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECC---EECCCC-CHHHHHHHHHhCCCeE
Confidence 344444 4567888876543 479999999999999999 999999999763 222111 1356667777666788
Q ss_pred EEEEeec
Q 022783 162 LMKMQKR 168 (292)
Q Consensus 162 ~l~l~r~ 168 (292)
.|++.|.
T Consensus 79 ~l~v~R~ 85 (88)
T 2uzc_A 79 NMTLQRE 85 (88)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 9999884
No 224
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.16 E-value=4e-06 Score=67.91 Aligned_cols=79 Identities=23% Similarity=0.449 Sum_probs=59.3
Q ss_pred eEEEEecC-----CceeEEeeeC-----------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhh
Q 022783 86 EYEVEIEQ-----PYGLKFAKGR-----------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR 149 (292)
Q Consensus 86 ~~~v~l~K-----PlGl~~~~~~-----------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~ 149 (292)
...|+|.| +||+.+..+. +++++|..|.++|.|+++|.+++||+|+.+.. ..+ ....+.+
T Consensus 30 ~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng---~~v-~~~~~~~ 105 (128)
T 1nf3_C 30 HRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNG---IEV-SGKSLDQ 105 (128)
T ss_dssp CEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETT---EES-TTCCHHH
T ss_pred cEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECC---EEC-CCCCHHH
Confidence 35566665 4899887542 24899999999999999998999999999863 222 1134556
Q ss_pred HHHHhhccCCceEEEEeec
Q 022783 150 TMYTIRQRVGPLLMKMQKR 168 (292)
Q Consensus 150 ~~~ai~~r~g~v~l~l~r~ 168 (292)
+...|+...+.|.|++.|.
T Consensus 106 ~~~~l~~~~~~v~l~v~r~ 124 (128)
T 1nf3_C 106 VTDMMIANSRNLIITVRPA 124 (128)
T ss_dssp HHHHHHHTTTSEEEEEECC
T ss_pred HHHHHHcCCCeEEEEEEEC
Confidence 7778876677899999874
No 225
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.16 E-value=8.4e-06 Score=72.37 Aligned_cols=82 Identities=11% Similarity=0.039 Sum_probs=60.8
Q ss_pred hhHHHHHhhHhHHH-HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCc-------------------------------cch
Q 022783 204 NYMKKKEQKERREQ-DLREGLQLYRTGKYEVAREKFESVLGSKPTP-------------------------------EES 251 (292)
Q Consensus 204 ~Y~kkk~lk~~~~~-~~n~G~~L~k~gdYeeAIe~fekALeldP~~-------------------------------~d~ 251 (292)
.|.+.....+...+ .+.+|..+.+.|++++|+..|++++..+|+. ++.
T Consensus 139 ~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~ 218 (287)
T 3qou_A 139 LLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPED 218 (287)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCcc
Confidence 55555555554433 4588888888888888887777776555531 122
Q ss_pred hHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccC
Q 022783 252 SVASYNVACCYSKLNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 252 a~a~YN~AccyakLgq~eeALe~LekAIelG~~D 285 (292)
..+++|+|.+|..+|++++|+..|.++++...++
T Consensus 219 ~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 219 AALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 4679999999999999999999999999987553
No 226
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.15 E-value=3.7e-06 Score=77.60 Aligned_cols=63 Identities=16% Similarity=0.229 Sum_probs=36.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 219 LREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 219 ~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
+..|..+...|+|++|+..|+++++++|+. ..+|+++|.+|..+|++++|+..++++++...+
T Consensus 314 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~ 376 (537)
T 3fp2_A 314 YHRGQMYFILQDYKNAKEDFQKAQSLNPEN---VYPYIQLACLLYKQGKFTESEAFFNETKLKFPT 376 (537)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 455666666666666666666666655542 234555666666666666666666666555443
No 227
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.15 E-value=6.7e-06 Score=61.96 Aligned_cols=73 Identities=19% Similarity=0.409 Sum_probs=55.4
Q ss_pred CCceeEEeeeCC-CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEeeccC
Q 022783 93 QPYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRYG 170 (292)
Q Consensus 93 KPlGl~~~~~~~-G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r~~~ 170 (292)
.++|+.+..+.+ .+++|..|.+++.|+++| |++||+|+++... .+ ......++...|+...+.+.+.+.|+-+
T Consensus 14 ~g~G~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~---~v-~~~~~~~~~~~l~~~~~~~~~~~~~r~~ 87 (91)
T 1g9o_A 14 NGYGFHLHGEKGKLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGE---NV-EKETHQQVVSRIRAALNAVRLLVVDPET 87 (91)
T ss_dssp TBCCEEEEECTTCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTE---EC-TTCCHHHHHHHHHTCSSEEEEEEECCCC
T ss_pred CcccEEEEecCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCE---EC-CCCCHHHHHHHHHcCCCcEEEEEEcCCc
Confidence 478999977654 599999999999999999 9999999998742 11 1112446778888877888777666544
No 228
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.15 E-value=5.1e-06 Score=70.40 Aligned_cols=95 Identities=7% Similarity=-0.011 Sum_probs=74.6
Q ss_pred HHhhccccchhhHH----HHHHH-hhHHHHHhhHhHHHHHHHHHHHHH----cCCHHHHHHHHHHHHcCCCCccchhHHH
Q 022783 185 RAERNSGVISNRVR----EIQMQ-NYMKKKEQKERREQDLREGLQLYR----TGKYEVAREKFESVLGSKPTPEESSVAS 255 (292)
Q Consensus 185 ~a~rN~GvI~~~l~----eiqea-~Y~kkk~lk~~~~~~~n~G~~L~k----~gdYeeAIe~fekALeldP~~~d~a~a~ 255 (292)
.+.++.|.+... . ..+++ .|+++..........+++|..+.. .+++++|+.+|++|++..|.. ....++
T Consensus 51 ~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~-~~~~a~ 128 (212)
T 3rjv_A 51 DALALLAQLKIR-NPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESD-AAVDAQ 128 (212)
T ss_dssp HHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSH-HHHHHH
T ss_pred HHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCc-chHHHH
Confidence 455555555544 3 44444 445555556677889999999988 899999999999999998831 124689
Q ss_pred HHHHHHHHh----cCCHHHHHHHHHHHHHh
Q 022783 256 YNVACCYSK----LNQVKAGLSALEDALLA 281 (292)
Q Consensus 256 YN~Accyak----Lgq~eeALe~LekAIel 281 (292)
+|++.+|.. .+++++|+..+++|+++
T Consensus 129 ~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 129 MLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 999999999 89999999999999998
No 229
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.15 E-value=6.7e-06 Score=63.60 Aligned_cols=83 Identities=22% Similarity=0.402 Sum_probs=59.6
Q ss_pred ccccceEEEEecC--CceeEEeeeC----------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchh
Q 022783 81 EEKYEEYEVEIEQ--PYGLKFAKGR----------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYG 148 (292)
Q Consensus 81 ~~~~~~~~v~l~K--PlGl~~~~~~----------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g 148 (292)
+...+.++|++.| +||+.+..+. +.+++|..|.+++.|++ | |++||+|+.+... .+ .....-
T Consensus 7 ~~~~~~~~v~l~~~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~---~v-~~~~~~ 80 (103)
T 1n7t_A 7 ELAKQEIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGY---SF-INIEHG 80 (103)
T ss_dssp SSSCCCEEEEEECSSCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTE---EC-SSCCHH
T ss_pred CcccEEEEEEEccCCCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCE---EC-CCCCHH
Confidence 3445667777765 6888887643 45899999999999999 7 9999999998631 11 111234
Q ss_pred hHHHHhhccCCceEEEEeecc
Q 022783 149 RTMYTIRQRVGPLLMKMQKRY 169 (292)
Q Consensus 149 ~~~~ai~~r~g~v~l~l~r~~ 169 (292)
++...++....++.|++.|..
T Consensus 81 ~~~~~~~~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 81 QAVSLLKTFQNTVELIIVREV 101 (103)
T ss_dssp HHHHHHHHCCSEEEEEEECCC
T ss_pred HHHHHhhcCCCeEEEEEEecC
Confidence 566677755677899999864
No 230
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.15 E-value=8.7e-06 Score=74.43 Aligned_cols=70 Identities=9% Similarity=0.027 Sum_probs=59.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHH-HHhcCCHHHHHHHHHHHHHhCccChh
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACC-YSKLNQVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Acc-yakLgq~eeALe~LekAIelG~~Df~ 287 (292)
.+++|..+.+.|+|++|++.|+++|+++|++.+...++++.+.+ +..+|++++|+..+++|+++..+.+.
T Consensus 337 ~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~~~ 407 (472)
T 4g1t_A 337 CSILASLHALADQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSRE 407 (472)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCCHH
T ss_pred hhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccHH
Confidence 46899999999999999999999999999865555667887754 56889999999999999999877544
No 231
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.14 E-value=9.8e-06 Score=79.75 Aligned_cols=98 Identities=11% Similarity=0.021 Sum_probs=72.3
Q ss_pred HHHhhccccchhhHHHHHHHhhHHHHHhhHh----HHHHHHHHHHHHHcCCHHHHHHHHHHHHc-----CCCCccchhHH
Q 022783 184 IRAERNSGVISNRVREIQMQNYMKKKEQKER----REQDLREGLQLYRTGKYEVAREKFESVLG-----SKPTPEESSVA 254 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea~Y~kkk~lk~~----~~~~~n~G~~L~k~gdYeeAIe~fekALe-----ldP~~~d~a~a 254 (292)
...++..|.+..++...+..--...+.+-.. ....-++|..|..+|+|++|+..|+++|+ +-|+.++.+..
T Consensus 316 a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~ 395 (490)
T 3n71_A 316 IDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMA 395 (490)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 4456677776655444443322111211111 13334999999999999999999999995 55776778889
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 255 SYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 255 ~YN~AccyakLgq~eeALe~LekAIel 281 (292)
++|+|.+|..+|++++|+..+++|+++
T Consensus 396 l~nLa~~~~~~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 396 VMRAGLTNWHAGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999875
No 232
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.14 E-value=8.5e-07 Score=72.24 Aligned_cols=28 Identities=21% Similarity=0.236 Sum_probs=15.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHcCCC
Q 022783 219 LREGLQLYRTGKYEVAREKFESVLGSKP 246 (292)
Q Consensus 219 ~n~G~~L~k~gdYeeAIe~fekALeldP 246 (292)
+.+|..+.+.|++++|+..|+++++.+|
T Consensus 44 ~~la~~~~~~g~~~~A~~~~~~a~~~~p 71 (176)
T 2r5s_A 44 LAKADCLLETKQFELAQELLATIPLEYQ 71 (176)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTCCGGGC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHhhhccC
Confidence 3555555555555555555555555555
No 233
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.13 E-value=1.2e-05 Score=71.16 Aligned_cols=94 Identities=11% Similarity=0.023 Sum_probs=69.1
Q ss_pred cccchhhHHHHHHH--hhHHHHH-hhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhc
Q 022783 190 SGVISNRVREIQMQ--NYMKKKE-QKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKL 265 (292)
Q Consensus 190 ~GvI~~~l~eiqea--~Y~kkk~-lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakL 265 (292)
.|++.......+++ .|.++.. +.+.. .-+++.|..+.+.|++++|++.|+++|+++|+. ...+|++.+.++..+
T Consensus 70 ~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~~~~~~~~ 147 (308)
T 2ond_A 70 KGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDID--PTLVYIQYMKFARRA 147 (308)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSC--THHHHHHHHHHHHHH
T ss_pred ccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccC--ccHHHHHHHHHHHHh
Confidence 45554333333443 5555555 34433 334688999999999999999999999999873 223799999999999
Q ss_pred CCHHHHHHHHHHHHHhCccC
Q 022783 266 NQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 266 gq~eeALe~LekAIelG~~D 285 (292)
|++++|+..+++|+++...+
T Consensus 148 ~~~~~A~~~~~~a~~~~p~~ 167 (308)
T 2ond_A 148 EGIKSGRMIFKKAREDARTR 167 (308)
T ss_dssp HCHHHHHHHHHHHHTSTTCC
T ss_pred cCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999876543
No 234
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.13 E-value=4e-06 Score=64.92 Aligned_cols=84 Identities=17% Similarity=0.370 Sum_probs=61.8
Q ss_pred cccceEEEEecC--CceeEEeeeCC--CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhcc
Q 022783 82 EKYEEYEVEIEQ--PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR 157 (292)
Q Consensus 82 ~~~~~~~v~l~K--PlGl~~~~~~~--G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r 157 (292)
....+++|++.+ |+|+.+..+.+ .+++|..|.|++.|+++|.|++||+|+++-. ..+... +..++..++..
T Consensus 8 ~~~~~~~v~~~~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing---~~v~~~--~~~~~~~~~~~ 82 (100)
T 2edp_A 8 GSFQYVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNING---TPLYGS--RQEALILIKGS 82 (100)
T ss_dssp CCCEEEEEECCSCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETT---EECCSC--SHHHHHHHHTC
T ss_pred CCcEEEEEEECCCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECC---EEccch--HHHHHHHHHhC
Confidence 345678888864 78888876533 3799999999999999944999999999763 222221 44566777766
Q ss_pred CCceEEEEeeccC
Q 022783 158 VGPLLMKMQKRYG 170 (292)
Q Consensus 158 ~g~v~l~l~r~~~ 170 (292)
..++.|++.|.-.
T Consensus 83 ~~~v~l~v~R~~~ 95 (100)
T 2edp_A 83 FRILKLIVRRRNS 95 (100)
T ss_dssp CSSCEEEEEECCC
T ss_pred CCeEEEEEEeCCC
Confidence 6788999998643
No 235
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.12 E-value=1.3e-05 Score=65.61 Aligned_cols=81 Identities=17% Similarity=0.322 Sum_probs=59.5
Q ss_pred EEEEecC----CceeEEeeeCCC--------------CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchh
Q 022783 87 YEVEIEQ----PYGLKFAKGRDG--------------GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYG 148 (292)
Q Consensus 87 ~~v~l~K----PlGl~~~~~~~G--------------~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g 148 (292)
..|+|.| ++|+.+..+.+. +++|..|.+++.|+++| |++||+|+++.. ..+ ......
T Consensus 29 r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng---~~v-~~~~~~ 103 (132)
T 3l4f_D 29 KTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNG---QNV-VKVGHR 103 (132)
T ss_dssp CEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESS---SBC-TTSCHH
T ss_pred EEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECC---EEC-CCCCHH
Confidence 4666655 689999887552 69999999999999999 999999999863 111 112344
Q ss_pred hHHHHhhccCCceEEEEeeccCCc
Q 022783 149 RTMYTIRQRVGPLLMKMQKRYGKM 172 (292)
Q Consensus 149 ~~~~ai~~r~g~v~l~l~r~~~~~ 172 (292)
++...|+.....+.|++.|...+.
T Consensus 104 ~~~~~l~~~g~~v~l~v~~~~~~~ 127 (132)
T 3l4f_D 104 QVVNMIRQGGNTLMVKVVMVTRHP 127 (132)
T ss_dssp HHHHHHHHTTTEEEEEEECCCC--
T ss_pred HHHHHHHcCCCEEEEEEEECCCCC
Confidence 677788876678889888865443
No 236
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.12 E-value=5.6e-06 Score=66.65 Aligned_cols=84 Identities=18% Similarity=0.314 Sum_probs=62.0
Q ss_pred ccceEEEEecC----CceeEEeeeCC-----CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHH
Q 022783 83 KYEEYEVEIEQ----PYGLKFAKGRD-----GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYT 153 (292)
Q Consensus 83 ~~~~~~v~l~K----PlGl~~~~~~~-----G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~a 153 (292)
+.+..+|+|.| ++|+.+..+.+ .+++|..|.|+|.|+++|.|++||+|+.+-.. .+ .....-+++..
T Consensus 22 ~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~---~v-~~~~~~~~~~~ 97 (120)
T 2iwo_A 22 SMGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGT---ST-EGMTHTQAVNL 97 (120)
T ss_dssp ---CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTE---EC-TTCBHHHHHHH
T ss_pred CCCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCE---EC-CCCCHHHHHHH
Confidence 33556777765 78999987643 38999999999999999559999999997632 22 11235567788
Q ss_pred hhccCCceEEEEeeccC
Q 022783 154 IRQRVGPLLMKMQKRYG 170 (292)
Q Consensus 154 i~~r~g~v~l~l~r~~~ 170 (292)
|+...+.|.|++.|..-
T Consensus 98 l~~~~~~v~l~v~r~g~ 114 (120)
T 2iwo_A 98 LKNASGSIEMQVVAGGD 114 (120)
T ss_dssp HHHCCSEEEEEEECCTT
T ss_pred HHcCCCeEEEEEEECCc
Confidence 88778889999998643
No 237
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.12 E-value=8.2e-07 Score=85.69 Aligned_cols=66 Identities=12% Similarity=0.123 Sum_probs=59.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
++++|..+++.|+|++|++.|++||+++|+. ..+|+|+|.||..+|++++|++++++|+++..++.
T Consensus 9 ~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 74 (477)
T 1wao_1 9 LKTQANDYFKAKDYENAIKFYSQAIELNPSN---AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYI 74 (477)
T ss_dssp SSSSSSSTTTTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCH
Confidence 3478889999999999999999999999974 56899999999999999999999999999976653
No 238
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.12 E-value=7.2e-06 Score=65.92 Aligned_cols=73 Identities=18% Similarity=0.298 Sum_probs=57.7
Q ss_pred CceeEEeeeCC----CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccC-CceEEEEeec
Q 022783 94 PYGLKFAKGRD----GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV-GPLLMKMQKR 168 (292)
Q Consensus 94 PlGl~~~~~~~----G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~-g~v~l~l~r~ 168 (292)
.||+.+....+ ++++|..|.+++.|+++|.|++||+|+.+.. . +...+.++..+|+... ..|.|++.|.
T Consensus 33 ~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing---~---~v~~~~~~~~~l~~~~g~~v~l~v~R~ 106 (124)
T 1wh1_A 33 KLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQING---I---EVQNREEAVALLTSEENKNFSLLIARP 106 (124)
T ss_dssp CCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESS---C---BCCSHHHHHHHHTCSSCCSCCEEEEEC
T ss_pred cccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC---E---ECCCHHHHHHHHHhCCCCEEEEEEEEC
Confidence 58999987653 7999999999999999998999999999763 2 2334567777888754 5789999986
Q ss_pred cCCc
Q 022783 169 YGKM 172 (292)
Q Consensus 169 ~~~~ 172 (292)
-..+
T Consensus 107 g~~~ 110 (124)
T 1wh1_A 107 ELQL 110 (124)
T ss_dssp SSCC
T ss_pred CEEe
Confidence 5543
No 239
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.10 E-value=1e-05 Score=60.89 Aligned_cols=80 Identities=24% Similarity=0.411 Sum_probs=57.0
Q ss_pred ceEEEEec--CCceeEEeeeC--CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCc
Q 022783 85 EEYEVEIE--QPYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGP 160 (292)
Q Consensus 85 ~~~~v~l~--KPlGl~~~~~~--~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~ 160 (292)
++++|+++ .|+|+.+..+. +.+++|..|.|++.|+++| |++||+|+.+-.. .+- ...+.++...++....+
T Consensus 3 ~~~~v~~~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~---~v~-~~~~~~~~~~~~~~g~~ 77 (89)
T 2q3g_A 3 DSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGE---NAG-SLTHIEAQNKIRACGER 77 (89)
T ss_dssp EEEEEEEESSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTE---EGG-GCCHHHHHHHHHTCTTE
T ss_pred cEEEEEEcCCCcccEEEECcCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECC-CCCHHHHHHHHHhCCCE
Confidence 34555555 45777776553 3489999999999999999 9999999997631 111 11345666777765667
Q ss_pred eEEEEeecc
Q 022783 161 LLMKMQKRY 169 (292)
Q Consensus 161 v~l~l~r~~ 169 (292)
+.|++.|.-
T Consensus 78 v~l~v~R~~ 86 (89)
T 2q3g_A 78 LSLGLSRAI 86 (89)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEeCC
Confidence 899998853
No 240
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.10 E-value=1.1e-05 Score=65.39 Aligned_cols=79 Identities=19% Similarity=0.373 Sum_probs=59.8
Q ss_pred ceEEEEecC----CceeEEeee-----------CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccc--h
Q 022783 85 EEYEVEIEQ----PYGLKFAKG-----------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--Y 147 (292)
Q Consensus 85 ~~~~v~l~K----PlGl~~~~~-----------~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~--~ 147 (292)
..++|++.| .||+.+... .+.+++|..|.|+|.|+++|.|++||+|+++... +... .
T Consensus 24 ~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~------~v~~~~~ 97 (123)
T 2iwq_A 24 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGM------DLRDASH 97 (123)
T ss_dssp CCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTE------ECTTCCH
T ss_pred CCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE------ECCCCCH
Confidence 345566653 578887542 2358999999999999999999999999998632 2333 5
Q ss_pred hhHHHHhhccCCceEEEEeecc
Q 022783 148 GRTMYTIRQRVGPLLMKMQKRY 169 (292)
Q Consensus 148 g~~~~ai~~r~g~v~l~l~r~~ 169 (292)
.++..+|+...+++.|+++|.-
T Consensus 98 ~~~~~~l~~~~~~v~l~v~r~~ 119 (123)
T 2iwq_A 98 EQAVEAIRKAGNPVVFMVQSII 119 (123)
T ss_dssp HHHHHHHHHCCSSEEEEEECCC
T ss_pred HHHHHHHHcCCCeEEEEEEECC
Confidence 6777888877779999998843
No 241
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.10 E-value=1e-05 Score=64.09 Aligned_cols=81 Identities=22% Similarity=0.454 Sum_probs=57.7
Q ss_pred EEEecC---CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEE
Q 022783 88 EVEIEQ---PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMK 164 (292)
Q Consensus 88 ~v~l~K---PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~ 164 (292)
.|+|.| ++|+.+....+++++|..|.+++.|+++| |++||+|+++.. ..+-....+ .....++....++.|+
T Consensus 22 ~v~l~~~~~~lG~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~Il~vng---~~v~~~~~~-~~~~~~~~~g~~v~l~ 96 (117)
T 1uit_A 22 HVKVQKGSEPLGISIVSGEKGGIYVSKVTVGSIAHQAG-LEYGDQLLEFNG---INLRSATEQ-QARLIIGQQCDTITIL 96 (117)
T ss_dssp EEEEECSSCCCCEEEEECTTSCEEEEEECTTSHHHHHT-CCTTCEECEETT---EETTTCCHH-HHHHHTTSCCSEEEEE
T ss_pred EEEEEeCCCCccEEEEccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECC---EECCCCCHH-HHHHHHHcCCCeEEEE
Confidence 456555 89999988778899999999999999999 999999999863 222122222 1222334445678999
Q ss_pred EeeccCCcc
Q 022783 165 MQKRYGKME 173 (292)
Q Consensus 165 l~r~~~~~~ 173 (292)
+.|....+.
T Consensus 97 v~r~~~~~~ 105 (117)
T 1uit_A 97 AQYNPHVHQ 105 (117)
T ss_dssp ECCCSCCCC
T ss_pred EEECCchhh
Confidence 998655443
No 242
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.09 E-value=9.8e-06 Score=61.18 Aligned_cols=73 Identities=18% Similarity=0.348 Sum_probs=55.4
Q ss_pred EecCCceeEEeeeCC--CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchh--hHHHHhhccCCceEEEE
Q 022783 90 EIEQPYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYG--RTMYTIRQRVGPLLMKM 165 (292)
Q Consensus 90 ~l~KPlGl~~~~~~~--G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g--~~~~ai~~r~g~v~l~l 165 (292)
.=+.|+|+.+..+.+ .+++|..|.|++.|+++| |++||+|+++.. . +...+. ++...|+....++.|.+
T Consensus 10 ~~~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing---~---~v~~~~~~~~~~~l~~~g~~v~l~v 82 (91)
T 2pkt_A 10 QGPGPWGFRLVGGKDFEQPLAISRVTPGSKAALAN-LCIGDVITAIDG---E---NTSNMTHLEAQNRIKGCTDNLTLTV 82 (91)
T ss_dssp ESSSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETT---E---ECTTCCHHHHHHHHHTCSSEEEEEE
T ss_pred CCCCCCCEEEEccCCCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECC---E---ECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 334578899887644 489999999999999999 999999999763 2 222333 56677777566789999
Q ss_pred eecc
Q 022783 166 QKRY 169 (292)
Q Consensus 166 ~r~~ 169 (292)
.|.-
T Consensus 83 ~R~g 86 (91)
T 2pkt_A 83 ARSE 86 (91)
T ss_dssp EEEC
T ss_pred EECC
Confidence 9854
No 243
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.09 E-value=1.5e-05 Score=63.91 Aligned_cols=76 Identities=13% Similarity=0.065 Sum_probs=64.0
Q ss_pred hhHHHHHhhHhHHHHHHHHHHHHH----cCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHh----cCCHHHHHHHH
Q 022783 204 NYMKKKEQKERREQDLREGLQLYR----TGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSK----LNQVKAGLSAL 275 (292)
Q Consensus 204 ~Y~kkk~lk~~~~~~~n~G~~L~k----~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accyak----Lgq~eeALe~L 275 (292)
.|+++..........+++|..|.. .+++++|+.+|++|.+..- ..+++|++.+|.. .+++++|+..+
T Consensus 46 ~~~~~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~-----~~a~~~Lg~~y~~G~g~~~d~~~A~~~~ 120 (138)
T 1klx_A 46 QYLSKACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLND-----QDGCLILGYKQYAGKGVVKNEKQAVKTF 120 (138)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHTSSSCCCHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcCCC-----HHHHHHHHHHHHCCCCCCcCHHHHHHHH
Confidence 444444444555677899999999 8999999999999998742 4579999999999 99999999999
Q ss_pred HHHHHhCcc
Q 022783 276 EDALLAGYE 284 (292)
Q Consensus 276 ekAIelG~~ 284 (292)
++|.+.|..
T Consensus 121 ~~Aa~~g~~ 129 (138)
T 1klx_A 121 EKACRLGSE 129 (138)
T ss_dssp HHHHHTTCH
T ss_pred HHHHHCCCH
Confidence 999999965
No 244
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.09 E-value=1.4e-05 Score=64.01 Aligned_cols=82 Identities=16% Similarity=0.207 Sum_probs=63.3
Q ss_pred ceEEEEecC----CceeEEeeeCC--CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccC
Q 022783 85 EEYEVEIEQ----PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV 158 (292)
Q Consensus 85 ~~~~v~l~K----PlGl~~~~~~~--G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~ 158 (292)
...+|+|.| .+|+.+..+.+ .+++|..|.++|.|+++|.+++||+|+++... .+ ......++...|+...
T Consensus 19 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~---~v-~~~~~~~~~~~l~~~~ 94 (125)
T 3hpk_A 19 VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGR---SI-KGKTKVEVAKMIQEVK 94 (125)
T ss_dssp EEEEEEEECCTTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTE---EC-TTCCHHHHHHHHHHSC
T ss_pred CCeEEEEEeCCCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHHcCC
Confidence 445677777 68999987744 48999999999999999999999999998632 11 2224556778888777
Q ss_pred CceEEEEeeccC
Q 022783 159 GPLLMKMQKRYG 170 (292)
Q Consensus 159 g~v~l~l~r~~~ 170 (292)
+.|.|+++|.-+
T Consensus 95 ~~v~l~v~r~~~ 106 (125)
T 3hpk_A 95 GEVTIHYNKLQA 106 (125)
T ss_dssp SEEEEEEEEECS
T ss_pred CeEEEEEEECCC
Confidence 889999998544
No 245
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.09 E-value=2.2e-06 Score=66.00 Aligned_cols=85 Identities=19% Similarity=0.416 Sum_probs=62.6
Q ss_pred ccceEEEEecC---CceeEEeeeCCC--CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhcc
Q 022783 83 KYEEYEVEIEQ---PYGLKFAKGRDG--GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR 157 (292)
Q Consensus 83 ~~~~~~v~l~K---PlGl~~~~~~~G--~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r 157 (292)
..+.+.|++.| ++|+.+..+.+. +++|..|.+++.|+++|.|++||+|+++.. ..+-. ....+++..|+..
T Consensus 9 ~~~~~~v~l~~~~~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng---~~v~~-~~~~~~~~~~~~~ 84 (103)
T 1wfv_A 9 DFDYFTVDMEKGAKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEING---ESTRD-MTHARAIELIKSG 84 (103)
T ss_dssp CSCCEECCEECCTTSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETT---EECSS-CCHHHHHHHHHHH
T ss_pred CceEEEEEEecCCCcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECC---EECCC-CCHHHHHHHHHcC
Confidence 34567788864 589999877553 899999999999999999999999999863 22211 1244566677744
Q ss_pred CCceEEEEeeccCC
Q 022783 158 VGPLLMKMQKRYGK 171 (292)
Q Consensus 158 ~g~v~l~l~r~~~~ 171 (292)
..+|.|++.|.-..
T Consensus 85 g~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 85 GRRVRLLLKRGTGS 98 (103)
T ss_dssp CSEECEEEECTTCS
T ss_pred CCeEEEEEEECCCC
Confidence 56789999986544
No 246
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.09 E-value=6.8e-06 Score=62.43 Aligned_cols=73 Identities=22% Similarity=0.432 Sum_probs=57.4
Q ss_pred CCceeEEeeeC-CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEeecc
Q 022783 93 QPYGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRY 169 (292)
Q Consensus 93 KPlGl~~~~~~-~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r~~ 169 (292)
.+||+.+..+. +++++|..|.++|.|+++|.|++||+|+.+.. ..+ ......++...|+...+++.|++.|..
T Consensus 15 ~~lG~~i~~~~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing---~~v-~~~~~~~~~~~l~~~~~~v~l~v~~~~ 88 (93)
T 3o46_A 15 EPLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVNG---IPV-EDKRPEEIIQILAQSQGAITFKIIPGS 88 (93)
T ss_dssp SCCCEEEEECTTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETT---EES-TTSCHHHHHHHHHHCCEEEEEEEECC-
T ss_pred CCccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 48999998753 56999999999999999999999999999863 222 223455677888877788999988754
No 247
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.09 E-value=5.3e-06 Score=64.84 Aligned_cols=83 Identities=22% Similarity=0.396 Sum_probs=62.5
Q ss_pred ccceEEEEecC---CceeEEeeeCC-CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccC
Q 022783 83 KYEEYEVEIEQ---PYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV 158 (292)
Q Consensus 83 ~~~~~~v~l~K---PlGl~~~~~~~-G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~ 158 (292)
..+...|+|.| ++|+.+..+.+ .+++|..|.+++.|+++|.|++||+|+++-.. .+-.. ....+...++...
T Consensus 13 ~~~~~~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~---~v~~~-~~~~~~~~~~~~~ 88 (113)
T 1um7_A 13 AREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGV---NLRNA-THEQAAAALKRAG 88 (113)
T ss_dssp CCSEEEEEEECCSSCSSBCCBCCSTTCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSC---BCTTC-CHHHHHHHHHSCC
T ss_pred CCceEEEEEEECCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---ECCCC-CHHHHHHHHHhCC
Confidence 44678888877 68999887654 59999999999999999989999999998632 22111 2345556677656
Q ss_pred CceEEEEeecc
Q 022783 159 GPLLMKMQKRY 169 (292)
Q Consensus 159 g~v~l~l~r~~ 169 (292)
..+.|.+.|..
T Consensus 89 ~~v~l~v~r~~ 99 (113)
T 1um7_A 89 QSVTIVAQYRP 99 (113)
T ss_dssp SEEEEEEECCH
T ss_pred CcEEEEEEECc
Confidence 77899998854
No 248
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.09 E-value=7e-06 Score=69.31 Aligned_cols=63 Identities=16% Similarity=0.103 Sum_probs=44.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHcCCCCc---cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 219 LREGLQLYRTGKYEVAREKFESVLGSKPTP---EESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 219 ~n~G~~L~k~gdYeeAIe~fekALeldP~~---~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
...|..+...|+|++|+..|++++++.|.. .....+++++|.+|..+|++++|+..+++|+++
T Consensus 267 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 332 (338)
T 3ro2_A 267 YSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI 332 (338)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 477777777777777777777777654432 122446777777777778888888777777776
No 249
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.08 E-value=5.3e-06 Score=58.73 Aligned_cols=79 Identities=23% Similarity=0.237 Sum_probs=55.9
Q ss_pred HHhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHH
Q 022783 185 RAERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACC 261 (292)
Q Consensus 185 ~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Acc 261 (292)
.+.++.|.+....++.+++ .|.+.....+.. ...++.|..+++.|+|++|+..|+++++++|++ ..+++|++.+
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~---~~~~~~l~~~ 86 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---AEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC---HHHHHHHHHH
Confidence 3444455554444444443 444444433332 445699999999999999999999999999974 4579999999
Q ss_pred HHhcC
Q 022783 262 YSKLN 266 (292)
Q Consensus 262 yakLg 266 (292)
+..+|
T Consensus 87 ~~~~g 91 (91)
T 1na3_A 87 KQKQG 91 (91)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 98765
No 250
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.08 E-value=2.4e-05 Score=60.76 Aligned_cols=82 Identities=17% Similarity=0.318 Sum_probs=57.2
Q ss_pred cccceEEEEecCC----ceeEEeeeCC--------CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhh
Q 022783 82 EKYEEYEVEIEQP----YGLKFAKGRD--------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR 149 (292)
Q Consensus 82 ~~~~~~~v~l~KP----lGl~~~~~~~--------G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~ 149 (292)
+.++.++|+|.|. +|+.+..+.+ .+++|..|.|++.|+ +| |++||+|+++.. ..+-....+ .
T Consensus 4 ~~~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng---~~v~~~~~~-~ 77 (107)
T 2h2b_A 4 MIWEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNG---VSMDNVEHA-F 77 (107)
T ss_dssp CCEEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETT---EECTTCCHH-H
T ss_pred ccceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECC---EECCCccHH-H
Confidence 3456788888775 8899886543 499999999999999 77 999999999863 222222222 2
Q ss_pred HHHHhhccCCceEEEEeecc
Q 022783 150 TMYTIRQRVGPLLMKMQKRY 169 (292)
Q Consensus 150 ~~~ai~~r~g~v~l~l~r~~ 169 (292)
.+..++....++.|++.|.-
T Consensus 78 ~~~~~~~~g~~v~l~v~R~~ 97 (107)
T 2h2b_A 78 AVQQLRKSGKNAKITIRRKK 97 (107)
T ss_dssp HHHHHHTCCSEEEEEEEEES
T ss_pred HHHHhhCCCCEEEEEEEECC
Confidence 22334444567899998853
No 251
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.07 E-value=4.8e-06 Score=64.58 Aligned_cols=82 Identities=22% Similarity=0.344 Sum_probs=59.8
Q ss_pred ceEEEEec--CCceeEEeeeCCC--CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCc
Q 022783 85 EEYEVEIE--QPYGLKFAKGRDG--GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGP 160 (292)
Q Consensus 85 ~~~~v~l~--KPlGl~~~~~~~G--~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~ 160 (292)
++++|+|. .|+|+.+..+.+. +++|..|.+++.|+++| |++||+|+++.. ..+... ..-.++..++....+
T Consensus 5 ~~~~v~l~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing---~~v~~~-~~~~~~~~~~~~g~~ 79 (103)
T 1wf7_A 5 SSGSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH-VRIGDVVLSIDG---ISAQGM-THLEAQNKIKACTGS 79 (103)
T ss_dssp CCEEEEEESSSCCSCCEEEETTTTEEEEECCCCTTCHHHHTT-CCTTCBEEEETT---EECSSC-CHHHHHHHHHHCSSE
T ss_pred CEEEEEEeCCCccCEEEeccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECC---EECCCC-CHHHHHHHHHcCCCe
Confidence 45777776 7788888876543 69999999999999999 999999999763 223222 223455666655667
Q ss_pred eEEEEeeccCC
Q 022783 161 LLMKMQKRYGK 171 (292)
Q Consensus 161 v~l~l~r~~~~ 171 (292)
+.|++.|.-..
T Consensus 80 v~l~v~R~g~~ 90 (103)
T 1wf7_A 80 LNMTLQRASAA 90 (103)
T ss_dssp EEEEECCCSCC
T ss_pred EEEEEEeCCCc
Confidence 89999886443
No 252
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.07 E-value=1.5e-05 Score=71.33 Aligned_cols=60 Identities=15% Similarity=0.055 Sum_probs=53.4
Q ss_pred HHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccChhh
Q 022783 226 YRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDFKV 288 (292)
Q Consensus 226 ~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df~~ 288 (292)
...|+|++|+..|+++++.+|++ ..+|+|+|.||..+|++++|+..+++|+++..++...
T Consensus 177 ~~~~~~~eA~~~~~~~l~~~p~~---~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~ 236 (291)
T 3mkr_A 177 AGGEKLQDAYYIFQEMADKCSPT---LLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPET 236 (291)
T ss_dssp HCTTHHHHHHHHHHHHHHHSCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hCchHHHHHHHHHHHHHHhCCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 34599999999999999999973 5689999999999999999999999999998876543
No 253
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.07 E-value=5.7e-06 Score=64.97 Aligned_cols=81 Identities=21% Similarity=0.419 Sum_probs=60.7
Q ss_pred EEEEec----CCceeEEeeeC-----------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHH
Q 022783 87 YEVEIE----QPYGLKFAKGR-----------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTM 151 (292)
Q Consensus 87 ~~v~l~----KPlGl~~~~~~-----------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~ 151 (292)
.+|+|. .+||+.+..+. +.+++|..|.+++.|+++|.|++||+|+.+.. ..+- ...+.+++
T Consensus 11 ~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng---~~v~-~~~~~~~~ 86 (111)
T 1uju_A 11 RELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQ---QSLL-GLTHGEAV 86 (111)
T ss_dssp SCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSS---CBCT-TSCHHHHH
T ss_pred EEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC---EECC-CCCHHHHH
Confidence 445553 46899998754 23899999999999999999999999999763 2221 12455777
Q ss_pred HHhhccCCceEEEEeeccCC
Q 022783 152 YTIRQRVGPLLMKMQKRYGK 171 (292)
Q Consensus 152 ~ai~~r~g~v~l~l~r~~~~ 171 (292)
.+|+.....+.|++.|.+-.
T Consensus 87 ~~l~~~g~~v~l~v~r~~~~ 106 (111)
T 1uju_A 87 QLLRSVGDTLTVLVCDGFES 106 (111)
T ss_dssp HHHSSCSSEEEECCCCCCCC
T ss_pred HHHHcCCCeEEEEEEECCCC
Confidence 88887667889999987643
No 254
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.07 E-value=1.6e-05 Score=62.72 Aligned_cols=82 Identities=20% Similarity=0.314 Sum_probs=59.3
Q ss_pred ccceEEEEecC----CceeEEeeeC----CC-----CeEEEEeCCCCCccc-ccCcccCCEEEEeccccCcccccccchh
Q 022783 83 KYEEYEVEIEQ----PYGLKFAKGR----DG-----GTYIDAIAPGGSADK-TGMFQVGDKVLATSAVFGTEIWPAAEYG 148 (292)
Q Consensus 83 ~~~~~~v~l~K----PlGl~~~~~~----~G-----~v~V~~v~~ggnA~k-~g~i~vGD~l~~~Sa~fg~e~w~a~~~g 148 (292)
..+..+|+|.| ++|+.+.... .| .++|..|.+++.|++ +| |++||+|+++.. ..+.. ..+.
T Consensus 8 ~~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing---~~v~~-~~~~ 82 (114)
T 1uew_A 8 SLQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNG---QSIIN-MPHA 82 (114)
T ss_dssp CCCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETT---BCTTT-SCHH
T ss_pred cccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECC---EECCC-CCHH
Confidence 34557788865 6899997542 23 569999999999999 77 999999999763 22221 1245
Q ss_pred hHHHHhhccCCceEEEEeecc
Q 022783 149 RTMYTIRQRVGPLLMKMQKRY 169 (292)
Q Consensus 149 ~~~~ai~~r~g~v~l~l~r~~ 169 (292)
++..+|+.....|.|++.|.-
T Consensus 83 ~~~~~l~~~g~~v~l~v~r~~ 103 (114)
T 1uew_A 83 DIVKLIKDAGLSVTLRIIPQE 103 (114)
T ss_dssp HHHHHHHHTTTEEEEEECCCS
T ss_pred HHHHHHHcCCCeEEEEEEeCC
Confidence 677778775667889998853
No 255
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.07 E-value=9.9e-06 Score=61.13 Aligned_cols=79 Identities=20% Similarity=0.423 Sum_probs=58.1
Q ss_pred EEEEec---CCceeEEeeeC--CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCce
Q 022783 87 YEVEIE---QPYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL 161 (292)
Q Consensus 87 ~~v~l~---KPlGl~~~~~~--~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v 161 (292)
..|+|. .++|+.+..+. +.+++|..|.+++.|+++|.|++||+|+++.. ..+- ...+.++...++...+++
T Consensus 7 r~v~l~k~~~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng---~~v~-~~~~~~~~~~~~~~~~~v 82 (93)
T 2dkr_A 7 GVVELPKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNG---VSVE-GEQHEKAVELLKAAQGSV 82 (93)
T ss_dssp CEEEEECCTTCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETT---EECT-TSCHHHHHHHHHHCCSEE
T ss_pred EEEEEEeCCCCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC---EECC-CCCHHHHHHHHHhCCCcE
Confidence 345554 57899997643 46999999999999999966999999999763 1121 113456667777666789
Q ss_pred EEEEeecc
Q 022783 162 LMKMQKRY 169 (292)
Q Consensus 162 ~l~l~r~~ 169 (292)
.|.+.|..
T Consensus 83 ~l~v~r~~ 90 (93)
T 2dkr_A 83 KLVVRSGP 90 (93)
T ss_dssp EEEECCCC
T ss_pred EEEEEeCC
Confidence 99998854
No 256
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.06 E-value=1e-05 Score=61.37 Aligned_cols=70 Identities=19% Similarity=0.334 Sum_probs=53.5
Q ss_pred CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEeeccCC
Q 022783 94 PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRYGK 171 (292)
Q Consensus 94 PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r~~~~ 171 (292)
++|+.+. +++||..|.++|.|+++|.+++||+|+.+... .+ ......++...|+...+.+.|++.+....
T Consensus 14 ~~G~~~~----~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~---~v-~~~~~~~~~~~i~~~~~~v~L~v~~~~~~ 83 (88)
T 3e17_A 14 EYGLRLG----SQIFVKEMTRTGLATKDGNLHEGDIILKINGT---VT-ENMSLTDARKLIEKSRGKLQLVVLRDLEH 83 (88)
T ss_dssp CCCEEEE----EEEEEEEECTTSHHHHHCCCCTTCEEEEETTE---EC-TTCCHHHHHHHHHHTTTEEEEEECCC---
T ss_pred CCCEEEe----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHHcCCCeEEEEEeCCCcc
Confidence 5677664 48999999999999999999999999998742 11 11345577888998889999998876543
No 257
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.06 E-value=1.9e-05 Score=62.59 Aligned_cols=83 Identities=22% Similarity=0.384 Sum_probs=60.5
Q ss_pred ccccceEEEEec----CCceeEEeeeC--------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchh
Q 022783 81 EEKYEEYEVEIE----QPYGLKFAKGR--------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYG 148 (292)
Q Consensus 81 ~~~~~~~~v~l~----KPlGl~~~~~~--------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g 148 (292)
+...+.++|+|. .+||+.+..+. +.+++|..|.|++.|+ +| |++||+|+.+.. ..+ .....-
T Consensus 10 ~~~~~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng---~~v-~~~~~~ 83 (117)
T 2csj_A 10 EVIWEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNG---TPM-EDVLHS 83 (117)
T ss_dssp CEEEEEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESS---CBC-BTCCHH
T ss_pred cccceEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECC---EEC-CCcCHH
Confidence 345677888885 46889988764 3389999999999997 66 999999999763 222 111233
Q ss_pred hHHHHhhccCCceEEEEeecc
Q 022783 149 RTMYTIRQRVGPLLMKMQKRY 169 (292)
Q Consensus 149 ~~~~ai~~r~g~v~l~l~r~~ 169 (292)
++..+|+....++.|++.|+-
T Consensus 84 ~~~~~l~~~~~~v~l~v~R~~ 104 (117)
T 2csj_A 84 FAVQQLRKSGKIAAIVVKRPR 104 (117)
T ss_dssp HHHHHHHHSCSEEEEEEEEEE
T ss_pred HHHHHHhcCCCeEEEEEEECC
Confidence 566677766678899998854
No 258
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.06 E-value=1.5e-05 Score=64.51 Aligned_cols=72 Identities=19% Similarity=0.365 Sum_probs=55.2
Q ss_pred EecCCceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccch--hhHHHHhhc--cCCceEEEE
Q 022783 90 EIEQPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEY--GRTMYTIRQ--RVGPLLMKM 165 (292)
Q Consensus 90 ~l~KPlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~--g~~~~ai~~--r~g~v~l~l 165 (292)
.-..+||+.+..+.+++++|..|.|++.|+++| |++||+|+++.. . +...+ .++..+|.. ...++.|.+
T Consensus 36 ~~~~~lG~~l~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng---~---~v~~~~~~~~~~~l~~~~~g~~v~l~v 108 (124)
T 3tsv_A 36 RKGDSVGLRLAGGNDVGIFVAGVLEDSPAAKEG-LEEGDQILRVNN---V---DFTNIIREEAVLFLLDLPKGEEVTILA 108 (124)
T ss_dssp ECSSCCCEEEEECTTSCEEEEEECTTCHHHHTT-CCTTEEEEEETT---E---ECSSCCHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCceeEEEecCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECC---E---ECCCCCHHHHHHHHHhcCCCCEEEEEE
Confidence 334589999988778899999999999999999 999999999763 2 22222 455666663 345688999
Q ss_pred eec
Q 022783 166 QKR 168 (292)
Q Consensus 166 ~r~ 168 (292)
+|.
T Consensus 109 ~R~ 111 (124)
T 3tsv_A 109 QKK 111 (124)
T ss_dssp EEC
T ss_pred EEC
Confidence 884
No 259
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.06 E-value=7.9e-06 Score=66.25 Aligned_cols=82 Identities=11% Similarity=0.215 Sum_probs=60.8
Q ss_pred ceEEEEecC---CceeEEeeeCC--CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhcc--
Q 022783 85 EEYEVEIEQ---PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR-- 157 (292)
Q Consensus 85 ~~~~v~l~K---PlGl~~~~~~~--G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r-- 157 (292)
+.++|+|.| .+|+.+..+.+ .+++|..|.++|.|+++|.|++||+|+.+-.. -.......++..+|+..
T Consensus 18 ~~~~v~l~~~~~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~----~v~~~~~~~~~~~l~~~~~ 93 (129)
T 2kpk_A 18 KFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDT----CVLGHTHAQVVKIFQSIPI 93 (129)
T ss_dssp EEEEEEEEECSSCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTE----ECTTSCHHHHHHHHHHSCT
T ss_pred cEEEEEEEECCCcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE----ECCCCCHHHHHHHHHhCCC
Confidence 556777765 68898876533 37999999999999999999999999997632 11111344667778765
Q ss_pred CCceEEEEeeccC
Q 022783 158 VGPLLMKMQKRYG 170 (292)
Q Consensus 158 ~g~v~l~l~r~~~ 170 (292)
...|.|++.|..-
T Consensus 94 g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 94 GASVDLELCRGYP 106 (129)
T ss_dssp TEEEEEEEEECSC
T ss_pred CCeEEEEEEeCCC
Confidence 4568999999753
No 260
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.06 E-value=1.4e-05 Score=71.53 Aligned_cols=99 Identities=16% Similarity=0.090 Sum_probs=73.2
Q ss_pred HHHhhccccchhhHHH-----------------HHHH--hhHHHHHhhH-------hHHHHHHHHHHHHHcCCHHHHHHH
Q 022783 184 IRAERNSGVISNRVRE-----------------IQMQ--NYMKKKEQKE-------RREQDLREGLQLYRTGKYEVAREK 237 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~e-----------------iqea--~Y~kkk~lk~-------~~~~~~n~G~~L~k~gdYeeAIe~ 237 (292)
..++.+.|.+...+.+ .+++ .|.+...+.. ......++|..++..|+|++|+..
T Consensus 166 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 245 (411)
T 4a1s_A 166 GRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEH 245 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 4466777888877777 6665 3333322211 112345899999999999999999
Q ss_pred HHHHHcCCCCcc---chhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 238 FESVLGSKPTPE---ESSVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 238 fekALeldP~~~---d~a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
|++++++.|... ....+++|+|.+|..+|++++|+..+++|+++.
T Consensus 246 ~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 293 (411)
T 4a1s_A 246 HQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALA 293 (411)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 999998776421 224479999999999999999999999998764
No 261
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.05 E-value=2.5e-05 Score=59.52 Aligned_cols=78 Identities=18% Similarity=0.331 Sum_probs=56.4
Q ss_pred ceEEEEecC---CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCce
Q 022783 85 EEYEVEIEQ---PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL 161 (292)
Q Consensus 85 ~~~~v~l~K---PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v 161 (292)
....|+|.| ++|+.+.. +.+++|..|.+++.|+++| |++||+|+++.. ..+-..... +++..++ ...++
T Consensus 8 ~~r~v~l~~~~~~~G~~l~~--~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing---~~v~~~~~~-~~~~~~~-~g~~v 79 (93)
T 2dls_A 8 VQRCVIIQKDQHGFGFTVSG--DRIVLVQSVRPGGAAMKAG-VKEGDRIIKVNG---TMVTNSSHL-EVVKLIK-SGAYV 79 (93)
T ss_dssp CEEEEEEECSSSSCCEEEEC--SSSCEEEEECSSSTTTTTT-CCSSCEEEEETT---EECSSSCHH-HHHHHHT-SSSEE
T ss_pred CCEEEEEEeCCCceeEEEeC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECC---EECCCCCHH-HHHHhhc-CCCEE
Confidence 345566655 57777754 5689999999999999999 999999999774 222222223 5666676 36788
Q ss_pred EEEEeeccC
Q 022783 162 LMKMQKRYG 170 (292)
Q Consensus 162 ~l~l~r~~~ 170 (292)
.|++.|...
T Consensus 80 ~l~v~R~~~ 88 (93)
T 2dls_A 80 ALTLLGSSS 88 (93)
T ss_dssp EEEEECCCC
T ss_pred EEEEEECCC
Confidence 999998643
No 262
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.05 E-value=1.5e-05 Score=70.14 Aligned_cols=64 Identities=16% Similarity=0.085 Sum_probs=49.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCc---cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTP---EESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~---~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
..+.|..+...|+|++|+..|++++++.+.. .....+++++|.+|..+|++++|+..+++|+++
T Consensus 270 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 336 (406)
T 3sf4_A 270 CYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI 336 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3588888888888888888888888764432 123557888888888888888888888888776
No 263
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.05 E-value=8.3e-06 Score=66.61 Aligned_cols=71 Identities=21% Similarity=0.334 Sum_probs=53.5
Q ss_pred CceeEEeeeC-----CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccC--CceEEEEe
Q 022783 94 PYGLKFAKGR-----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV--GPLLMKMQ 166 (292)
Q Consensus 94 PlGl~~~~~~-----~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~--g~v~l~l~ 166 (292)
+||+.+..+. +.++||..|.++|.|+++|.|++||+|+.+-.. -.....+.++...|+... ..|.|++.
T Consensus 49 ~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~----~v~~~~~~~~~~~l~~~~~g~~v~l~v~ 124 (131)
T 1wfg_A 49 MLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGR----LLQGATFEEVYNIILESKPEPQVELVVS 124 (131)
T ss_dssp TTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTE----ECTTCCHHHHHHHHHHTSSSSEEEEEEE
T ss_pred CCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE----ECCCCCHHHHHHHHHhcCCCCEEEEEEE
Confidence 4899996542 238999999999999999999999999997632 111123456777887653 67899998
Q ss_pred ec
Q 022783 167 KR 168 (292)
Q Consensus 167 r~ 168 (292)
|.
T Consensus 125 R~ 126 (131)
T 1wfg_A 125 RS 126 (131)
T ss_dssp EE
T ss_pred cC
Confidence 85
No 264
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.05 E-value=8.4e-06 Score=60.54 Aligned_cols=77 Identities=23% Similarity=0.393 Sum_probs=55.6
Q ss_pred EEEEecCC---ceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEE
Q 022783 87 YEVEIEQP---YGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLM 163 (292)
Q Consensus 87 ~~v~l~KP---lGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l 163 (292)
.+|+|.|. +|+.+.. +.+++|..|.+++.|+++| |++||+|+++.. ..+-.. .+.+++..|+.....+.|
T Consensus 4 r~v~l~~~~~g~G~~~~~--~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing---~~v~~~-~~~~~~~~l~~~~~~v~l 76 (83)
T 2kv8_A 4 RSVEVARGRAGYGFTLSG--QAPCVLSCVMRGSPADFVG-LRAGDQILAVNE---INVKKA-SHEDVVKLIGKCSGVLHM 76 (83)
T ss_dssp EEEEECCCSSCCSCBCCC--SSSCBCCBCCTTSTTTTTT-CCTTCEEEEETT---EECSSC-CHHHHHHHHTTCSSCEEE
T ss_pred EEEEEEeCCCcccEEEEc--CCCeEEEEeCCCChHHHcC-CCCCCEEEEECC---EECCCC-CHHHHHHHHHhCCCeEEE
Confidence 56666654 5555543 4479999999999999999 999999999763 222221 135677777766678999
Q ss_pred EEeeccC
Q 022783 164 KMQKRYG 170 (292)
Q Consensus 164 ~l~r~~~ 170 (292)
++.|..|
T Consensus 77 ~v~R~~g 83 (83)
T 2kv8_A 77 VIAEGVG 83 (83)
T ss_dssp EEECCCC
T ss_pred EEEcCCC
Confidence 9999754
No 265
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.04 E-value=1.5e-05 Score=70.14 Aligned_cols=99 Identities=18% Similarity=0.085 Sum_probs=69.7
Q ss_pred HHHhhccccchhhHHH--------------------HHHH--hhHHHHHhhH------h-HHHHHHHHHHHHHcCCHHHH
Q 022783 184 IRAERNSGVISNRVRE--------------------IQMQ--NYMKKKEQKE------R-REQDLREGLQLYRTGKYEVA 234 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~e--------------------iqea--~Y~kkk~lk~------~-~~~~~n~G~~L~k~gdYeeA 234 (292)
..++.+.|.+...+.+ .+++ .|.+...+-. . .....+.|..++..|+|++|
T Consensus 127 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 206 (406)
T 3sf4_A 127 ARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDA 206 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHH
T ss_pred HHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHH
Confidence 3466777777777777 6665 3333322211 1 12345889999999999999
Q ss_pred HHHHHHHHcCCCCcc---chhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 235 REKFESVLGSKPTPE---ESSVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 235 Ie~fekALeldP~~~---d~a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
+..|++++++.|+.. ....+|+|+|.+|..+|++++|+..+++|+++.
T Consensus 207 ~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 257 (406)
T 3sf4_A 207 VIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLA 257 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 999999997655422 234578999999999999999999999998763
No 266
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.04 E-value=1.6e-05 Score=60.88 Aligned_cols=76 Identities=12% Similarity=0.245 Sum_probs=56.3
Q ss_pred ceEEEEecC----CceeEEee-------eC--CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccc--hhh
Q 022783 85 EEYEVEIEQ----PYGLKFAK-------GR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGR 149 (292)
Q Consensus 85 ~~~~v~l~K----PlGl~~~~-------~~--~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~--~g~ 149 (292)
...+|+|.| ++|+.+.. +. +.+++|..|.+++.|+++| |++||+|+.+... +... +.+
T Consensus 4 ~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~------~v~~~~~~~ 76 (96)
T 2ego_A 4 QRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGL------NVEGIRHRE 76 (96)
T ss_dssp CEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTE------ECTTCCHHH
T ss_pred ccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCE------ECCCCCHHH
Confidence 346677765 67888875 22 2389999999999999999 9999999998631 2222 456
Q ss_pred HHHHhhccCCceEEEEee
Q 022783 150 TMYTIRQRVGPLLMKMQK 167 (292)
Q Consensus 150 ~~~ai~~r~g~v~l~l~r 167 (292)
+...|+...+++.|++.+
T Consensus 77 ~~~~l~~~~~~v~l~v~~ 94 (96)
T 2ego_A 77 IVDIIKASGNVLRLETLY 94 (96)
T ss_dssp HHHHHHHTTTEEEEEEEC
T ss_pred HHHHHHhCCCeEEEEEEE
Confidence 777787777788888876
No 267
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.04 E-value=1.2e-05 Score=62.64 Aligned_cols=83 Identities=20% Similarity=0.335 Sum_probs=61.0
Q ss_pred EEEEecC----CceeEEeeeCC--CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCc
Q 022783 87 YEVEIEQ----PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGP 160 (292)
Q Consensus 87 ~~v~l~K----PlGl~~~~~~~--G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~ 160 (292)
..|+|.| ++|+.+.-+.+ .+++|..|.++|.|++++.|++||+|+.+.. ..+ ....+.++...|+...+.
T Consensus 11 ~~v~l~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing---~~v-~~~~~~~~~~~l~~~~~~ 86 (103)
T 2dc2_A 11 RKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNG---VNL-RDTKHKEAVTILSQQRGE 86 (103)
T ss_dssp EEEEEECCSSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETT---EES-TTSCHHHHHHHHHHCCSE
T ss_pred EEEEEEeCCCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHHhCCCc
Confidence 5666654 78999986633 3899999999999999744999999999863 222 112466778888888889
Q ss_pred eEEEEeeccCCcc
Q 022783 161 LLMKMQKRYGKME 173 (292)
Q Consensus 161 v~l~l~r~~~~~~ 173 (292)
+.|++.|.+...+
T Consensus 87 v~l~v~~~~~~~~ 99 (103)
T 2dc2_A 87 IEFEVVYVALEHH 99 (103)
T ss_dssp EEEEEEECC----
T ss_pred EEEEEEecCCcch
Confidence 9999999877643
No 268
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.04 E-value=1.3e-05 Score=61.73 Aligned_cols=70 Identities=20% Similarity=0.468 Sum_probs=52.3
Q ss_pred CceeEEeee--------------CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccC-
Q 022783 94 PYGLKFAKG--------------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV- 158 (292)
Q Consensus 94 PlGl~~~~~--------------~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~- 158 (292)
+||+.+..+ .++|++|..|.|++.|+++| |++||+|+++.. ..+ ....+.++..+|+...
T Consensus 20 ~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing---~~v-~~~~~~~~~~~l~~~~g 94 (104)
T 3sfj_A 20 ILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNG---WDM-TMVTHDQARKRLTKRSE 94 (104)
T ss_dssp ECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETT---EEC-TTCCHHHHHHHHTCTTC
T ss_pred cccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECC---EEC-CCCCHHHHHHHHHhCCC
Confidence 489988732 24589999999999999999 999999999762 222 1122556777887654
Q ss_pred CceEEEEeec
Q 022783 159 GPLLMKMQKR 168 (292)
Q Consensus 159 g~v~l~l~r~ 168 (292)
.++.|.+.|+
T Consensus 95 ~~v~l~v~R~ 104 (104)
T 3sfj_A 95 EVVRLLVTRQ 104 (104)
T ss_dssp SEEEEEEEEC
T ss_pred CEEEEEEEcC
Confidence 4788888874
No 269
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.03 E-value=1.1e-05 Score=75.87 Aligned_cols=63 Identities=21% Similarity=0.283 Sum_probs=33.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHcC------CCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 220 REGLQLYRTGKYEVAREKFESVLGS------KPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 220 n~G~~L~k~gdYeeAIe~fekALel------dP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
..|..+.+.|++++|++.|++++++ +|+ ....+|++++.+|.++|++++|++.++++++++.+
T Consensus 480 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~--~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~ 548 (597)
T 2xpi_A 480 ELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEK--PWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTN 548 (597)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSG--GGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhhhccccchh--hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 4555555555555555555555544 221 11344555555555555566666555555555543
No 270
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.03 E-value=1.3e-05 Score=60.66 Aligned_cols=80 Identities=23% Similarity=0.340 Sum_probs=57.5
Q ss_pred EEEEecC---CceeEEeeeCC-CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceE
Q 022783 87 YEVEIEQ---PYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (292)
Q Consensus 87 ~~v~l~K---PlGl~~~~~~~-G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~ 162 (292)
-.|+|.| .+|+.+..+.+ .+++|..|.+++.|+++| |++||+|+++... .+ ....+.++...|+...+.+.
T Consensus 7 r~v~l~~~~~~~G~~l~~~~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~---~v-~~~~~~~~~~~l~~~~~~~~ 81 (95)
T 3r68_A 7 RVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGK---SV-EALDHDGVVEMIRKGGDQTT 81 (95)
T ss_dssp EEEEEECBTTBCSCEEEEC--CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTE---EC-TTCCHHHHHHHHHTTTTEEE
T ss_pred EEEEEecCCCcccEEEEecCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCE---EC-CCCCHHHHHHHHHhCCCeEE
Confidence 3455544 68899887644 399999999999999999 9999999998631 11 11133567788888788888
Q ss_pred EEEeeccCC
Q 022783 163 MKMQKRYGK 171 (292)
Q Consensus 163 l~l~r~~~~ 171 (292)
+.+.|+-++
T Consensus 82 ~~~~r~~~~ 90 (95)
T 3r68_A 82 LLVLDKELE 90 (95)
T ss_dssp EEEEECC--
T ss_pred EEEECCccc
Confidence 888776543
No 271
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.03 E-value=2.1e-05 Score=62.55 Aligned_cols=85 Identities=25% Similarity=0.433 Sum_probs=62.3
Q ss_pred cccceEEEEecC----------CceeEEeeeCC-------CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccc
Q 022783 82 EKYEEYEVEIEQ----------PYGLKFAKGRD-------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPA 144 (292)
Q Consensus 82 ~~~~~~~v~l~K----------PlGl~~~~~~~-------G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a 144 (292)
......+|+|.| +||+.+..+.+ .+++|..|.+++.|+++|.|++||+|+.+.. ..+ ..
T Consensus 9 ~~~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng---~~v-~~ 84 (117)
T 1ujd_A 9 YIFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNG---IPL-TS 84 (117)
T ss_dssp CSSCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETT---EEC-TT
T ss_pred CCCceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECC---EEc-CC
Confidence 344445666655 47899876543 2799999999999999999999999999863 222 12
Q ss_pred cchhhHHHHhhccCCceEEEEeeccC
Q 022783 145 AEYGRTMYTIRQRVGPLLMKMQKRYG 170 (292)
Q Consensus 145 ~~~g~~~~ai~~r~g~v~l~l~r~~~ 170 (292)
..+-++...|+...++|.|+++|...
T Consensus 85 ~~~~~~~~~l~~~~~~v~l~v~R~~~ 110 (117)
T 1ujd_A 85 KTYEEVQSIISQQSGEAEICVRLDLN 110 (117)
T ss_dssp CCHHHHHHHHSCCSSCEEEEEESSCC
T ss_pred CCHHHHHHHHhcCCCEEEEEEEECCc
Confidence 23456777888877889999998644
No 272
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.02 E-value=1.8e-05 Score=63.48 Aligned_cols=88 Identities=17% Similarity=0.327 Sum_probs=65.3
Q ss_pred cccccceEEEEecC----CceeEEeee------CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhh
Q 022783 80 QEEKYEEYEVEIEQ----PYGLKFAKG------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR 149 (292)
Q Consensus 80 ~~~~~~~~~v~l~K----PlGl~~~~~------~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~ 149 (292)
.-...+.++|+|.| .+|+.+..+ .+..++|..|.+++.|+++|.|++||+|+++.. ..+ ....+.+
T Consensus 10 ~~~~~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing---~~v-~~~~~~~ 85 (122)
T 1v5q_A 10 QVVHTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAING---IPT-EDSTFEE 85 (122)
T ss_dssp CCCCEEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETT---EES-SSSCHHH
T ss_pred ccccceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECC---EEC-CCCCHHH
Confidence 34456788999975 488998754 235799999999999999999999999999763 222 1122556
Q ss_pred HHHHhhcc--CCceEEEEeeccCC
Q 022783 150 TMYTIRQR--VGPLLMKMQKRYGK 171 (292)
Q Consensus 150 ~~~ai~~r--~g~v~l~l~r~~~~ 171 (292)
+..+|+.. ..++.|+++|....
T Consensus 86 ~~~~l~~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 86 ANQLLRDSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp HHHHHHHHTTTTCEEEEEEEECCC
T ss_pred HHHHHHhCCCCCeEEEEEEECCcc
Confidence 77777765 35899999996543
No 273
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.02 E-value=8.2e-06 Score=59.53 Aligned_cols=67 Identities=27% Similarity=0.418 Sum_probs=52.3
Q ss_pred cCCceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCccccccc--chhhHHHHhhccCCceEEEEeec
Q 022783 92 EQPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAA--EYGRTMYTIRQRVGPLLMKMQKR 168 (292)
Q Consensus 92 ~KPlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~--~~g~~~~ai~~r~g~v~l~l~r~ 168 (292)
.+++|+.+. ++++|..|.+++.|+++|.|++||+|+++.. . +.. .+..+..+|+...+++.|.+.|.
T Consensus 12 ~~~~g~~~~----~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing---~---~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 80 (81)
T 2rcz_A 12 NEEYGLRLA----SHIFVKEISQDSLAARDGNIQEGDVVLKING---T---VTENMSLTDAKTLIERSKGKLKMVVQRD 80 (81)
T ss_dssp TCCCCEEEE----EEEEEEEECTTSHHHHHSSCCTTCEEEEETT---E---ECTTCCHHHHHHHHHTSTTEEEEEEEC-
T ss_pred CCCCCEEEe----CCEEEEEECCCChHHHCCCCCCCCEEEEECC---E---ECCCCCHHHHHHHHHCCCCeEEEEEEeC
Confidence 457787776 6899999999999999998999999999763 2 223 45566777876667888888873
No 274
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.02 E-value=1.1e-05 Score=64.14 Aligned_cols=86 Identities=17% Similarity=0.268 Sum_probs=61.7
Q ss_pred cccceEEEEecC----CceeEEeeeCC---CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHh
Q 022783 82 EKYEEYEVEIEQ----PYGLKFAKGRD---GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (292)
Q Consensus 82 ~~~~~~~v~l~K----PlGl~~~~~~~---G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai 154 (292)
...+...|.|.| ++|+.+..+.+ .+++|..|.|++.|+++|.|++||+|+++-. ..+ ....+-++..+|
T Consensus 12 ~~~~~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing---~~v-~~~~~~~~~~~l 87 (119)
T 1x6d_A 12 QLDGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSING---KSL-KGTTHHDALAIL 87 (119)
T ss_dssp SCTTEEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETT---EEC-SSCCHHHHHHHH
T ss_pred CCCCeEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECC---EEC-CCCCHHHHHHHH
Confidence 344566777766 69999977643 5899999999999999999999999999763 222 222455677788
Q ss_pred hccCCceE-EEEeeccCC
Q 022783 155 RQRVGPLL-MKMQKRYGK 171 (292)
Q Consensus 155 ~~r~g~v~-l~l~r~~~~ 171 (292)
+...+.+. +.+.|..-.
T Consensus 88 ~~~~~~~~~l~v~R~~~~ 105 (119)
T 1x6d_A 88 RQAREPRQAVIVTRKLTP 105 (119)
T ss_dssp HHTTSSSEEEEEEECCCS
T ss_pred HhCCCCeEEEEEEcCCCc
Confidence 76666654 677775433
No 275
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.02 E-value=1.6e-05 Score=71.06 Aligned_cols=65 Identities=14% Similarity=0.110 Sum_probs=52.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccch---hHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPEES---SVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~---a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
++.+|..++..|+|++|+..|++++++.....+. ..+|+++|.+|..+|++++|+..+++|+++.
T Consensus 89 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 156 (411)
T 4a1s_A 89 YSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLA 156 (411)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 4588999999999999999999998775433233 4678899999999999999999999998874
No 276
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.01 E-value=1.8e-05 Score=66.78 Aligned_cols=66 Identities=17% Similarity=0.065 Sum_probs=49.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccch---hHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPEES---SVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~---a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
....|..++..|+|++|++.|++++++.+...+. ..+|+++|.+|..+|++++|+..+++|+++..
T Consensus 46 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 114 (338)
T 3ro2_A 46 YSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISR 114 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 3477888888888888888888888765543222 45778888888888888888888888887753
No 277
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.01 E-value=1.5e-05 Score=62.48 Aligned_cols=75 Identities=27% Similarity=0.461 Sum_probs=57.7
Q ss_pred cCCceeEEeeeC-------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEE
Q 022783 92 EQPYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMK 164 (292)
Q Consensus 92 ~KPlGl~~~~~~-------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~ 164 (292)
..++|+.+.-+. +++++|..|.+++.|+++|.|++||+|+.+... .+ ......+++.+++...++|.|+
T Consensus 12 ~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~---~v-~~~~~~~~~~~l~~~~~~v~l~ 87 (106)
T 4amh_A 12 SKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNV---AL-EEVTHEEAVTALKNTSDFVYLK 87 (106)
T ss_dssp CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTE---EC-SSCCHHHHHHHHHSCCSEEEEE
T ss_pred CCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHhCCCCeEEEE
Confidence 467899987653 348999999999999999999999999998642 12 1123446677888777899999
Q ss_pred EeeccC
Q 022783 165 MQKRYG 170 (292)
Q Consensus 165 l~r~~~ 170 (292)
+.|.-.
T Consensus 88 v~R~~~ 93 (106)
T 4amh_A 88 VAKPGS 93 (106)
T ss_dssp EECCSS
T ss_pred EEeCCC
Confidence 999654
No 278
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.01 E-value=1.3e-05 Score=63.65 Aligned_cols=81 Identities=19% Similarity=0.339 Sum_probs=59.8
Q ss_pred ceEEEEecC----CceeEEeeeCC--CCeEEEEeCCCCCcccc-cCcccCCEEEEeccccCcccccccchhhHHHHhhcc
Q 022783 85 EEYEVEIEQ----PYGLKFAKGRD--GGTYIDAIAPGGSADKT-GMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR 157 (292)
Q Consensus 85 ~~~~v~l~K----PlGl~~~~~~~--G~v~V~~v~~ggnA~k~-g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r 157 (292)
+...|+|.| ++|+.+..+.+ .+++|..|.+++.|+++ |.|++||+|+++-.. .+ ....+-++...|+..
T Consensus 15 ~~~~v~l~k~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~---~v-~~~~~~~~~~~~~~~ 90 (119)
T 2cs5_A 15 NLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGR---DI-AEHTHDQVVLFIKAS 90 (119)
T ss_dssp CCEEEEECCCSSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTB---CT-TSSCHHHHHHHHHHH
T ss_pred CeEEEEEEeCCCCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCE---EC-CCCCHHHHHHHHHhc
Confidence 457788887 69999987643 37999999999999999 349999999997631 11 112344566677755
Q ss_pred C----CceEEEEeecc
Q 022783 158 V----GPLLMKMQKRY 169 (292)
Q Consensus 158 ~----g~v~l~l~r~~ 169 (292)
. .+|.|++.|..
T Consensus 91 ~~~~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 91 CERHSGELMLLVRPNA 106 (119)
T ss_dssp HHCCSSCEEEEEECCC
T ss_pred cccCCCEEEEEEEccc
Confidence 3 48999999863
No 279
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.99 E-value=1.9e-05 Score=67.47 Aligned_cols=71 Identities=13% Similarity=0.113 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHcCC-CCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccChh
Q 022783 215 REQDLREGLQLYRTG---KYEVAREKFESVLGSK-PTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 215 ~~~~~n~G~~L~k~g---dYeeAIe~fekALeld-P~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df~ 287 (292)
....|+.|..|.+.+ ++++||..+++.+..+ |. +...++||+|..|+++|+|++|+..|+++|++-+++.+
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~--~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~Q 106 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKE--EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQ 106 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHH--HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcc--chHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHH
Confidence 466789999999988 8889999999999887 63 33567999999999999999999999999999887543
No 280
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=97.98 E-value=1.9e-05 Score=59.36 Aligned_cols=66 Identities=27% Similarity=0.419 Sum_probs=52.1
Q ss_pred CCceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCccccccc--chhhHHHHhhccCCceEEEEeec
Q 022783 93 QPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAA--EYGRTMYTIRQRVGPLLMKMQKR 168 (292)
Q Consensus 93 KPlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~--~~g~~~~ai~~r~g~v~l~l~r~ 168 (292)
+++|+.+. ++++|..|.+++.|+++|.|++||+|+++.. . +.. .+.++..+|+...+++.|.+.|.
T Consensus 15 ~~~g~~~~----~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing---~---~v~~~~~~~~~~~l~~~~~~v~l~v~r~ 82 (92)
T 3cyy_A 15 EEYGLRLA----SHIFVKEISQDSLAARDGNIQEGDVVLKING---T---VTENMSLTDAKTLIERSKGKLKMVVQRD 82 (92)
T ss_dssp SCCCEEEE----EEEEEEEECTTCHHHHSCCCCTTCEEEEETT---E---ECTTCCHHHHHHHHHTTTTEEEEEEEC-
T ss_pred CCCCEEEe----CCEEEEEECCCChHHhcCCCCCCCEEEEECC---E---ECCCCCHHHHHHHHHcCCCcEEEEEEeC
Confidence 36788775 6899999999999999998999999999763 2 223 55566778877667889999884
No 281
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=97.97 E-value=2e-05 Score=60.02 Aligned_cols=74 Identities=22% Similarity=0.382 Sum_probs=55.3
Q ss_pred CCceeEEeee--CCC--CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEeec
Q 022783 93 QPYGLKFAKG--RDG--GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKR 168 (292)
Q Consensus 93 KPlGl~~~~~--~~G--~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r~ 168 (292)
.++|+.+... .++ +++|..|.+++.|+++| |++||+|+++... .+ ....+.++..+|+....++.|.+.|.
T Consensus 14 ~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~---~v-~~~~~~~~~~~l~~~g~~v~l~v~r~ 88 (96)
T 2v90_A 14 QGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGE---SV-EGLGHEETVSRIQGQGSCVSLTVVDP 88 (96)
T ss_dssp TBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTE---EC-TTCCHHHHHHHHHTTTTEEEEEEECC
T ss_pred CcccEEEEeccCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCE---EC-CCCCHHHHHHHHHcCCCEEEEEEECC
Confidence 4788888774 222 79999999999999999 9999999997642 11 11225567777877667889999986
Q ss_pred cCC
Q 022783 169 YGK 171 (292)
Q Consensus 169 ~~~ 171 (292)
-..
T Consensus 89 ~~~ 91 (96)
T 2v90_A 89 EAD 91 (96)
T ss_dssp CTT
T ss_pred CCc
Confidence 543
No 282
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=97.95 E-value=1.2e-05 Score=64.50 Aligned_cols=81 Identities=19% Similarity=0.314 Sum_probs=61.3
Q ss_pred ceEEEEec----CCceeEEeeeCC-CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccc--hhhHHHHhhcc
Q 022783 85 EEYEVEIE----QPYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGRTMYTIRQR 157 (292)
Q Consensus 85 ~~~~v~l~----KPlGl~~~~~~~-G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~--~g~~~~ai~~r 157 (292)
+.++|+|. ..+|+.+....+ ++++|..|.+++.|+++|.|++||+|+++... +... +.++...|+..
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~------~v~~~~~~~~~~~l~~~ 81 (127)
T 1b8q_A 8 NVISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDR------PLVDLSYDSALEVLRGI 81 (127)
T ss_dssp CSEEEEEECTTTSCCSCCEEECTTSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTE------ECSSSCHHHHHHHHHSC
T ss_pred ceEEEEEEeCCCCcEeEEEEecCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCE------ECCCCCHHHHHHHHHhC
Confidence 45677773 468888887644 59999999999999999966999999998632 2233 56677788765
Q ss_pred C-CceEEEEeeccCC
Q 022783 158 V-GPLLMKMQKRYGK 171 (292)
Q Consensus 158 ~-g~v~l~l~r~~~~ 171 (292)
. .++.|.+.|.-..
T Consensus 82 ~g~~v~l~v~R~g~~ 96 (127)
T 1b8q_A 82 ASETHVVLILRGPEG 96 (127)
T ss_dssp CSSCEEEEEECCCCS
T ss_pred CCCeEEEEEEeCCce
Confidence 4 5789999986544
No 283
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=97.95 E-value=2.4e-05 Score=58.39 Aligned_cols=77 Identities=22% Similarity=0.385 Sum_probs=55.0
Q ss_pred EEEEecC----CceeEEeeeC--CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCc
Q 022783 87 YEVEIEQ----PYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGP 160 (292)
Q Consensus 87 ~~v~l~K----PlGl~~~~~~--~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~ 160 (292)
++|+|.| ++|+.+..+. +.+++|..|.|++.|++++.+++||+|+++.. ..+ ......++...|+...++
T Consensus 4 ~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng---~~v-~~~~~~~~~~~~~~~~~~ 79 (87)
T 4e34_A 4 RKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNG---VNL-RDTKHKEAVTILSQQRGE 79 (87)
T ss_dssp EEEEEECCTTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETT---EEC-TTCCHHHHHHHHHHCCSE
T ss_pred EEEEEEECCCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHHcCCCe
Confidence 5566655 6888887653 33799999999999999533999999999863 222 112445666777766667
Q ss_pred eEEEEee
Q 022783 161 LLMKMQK 167 (292)
Q Consensus 161 v~l~l~r 167 (292)
+.|++++
T Consensus 80 v~l~v~~ 86 (87)
T 4e34_A 80 IEFEVVY 86 (87)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8888764
No 284
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=97.94 E-value=3.6e-05 Score=60.12 Aligned_cols=78 Identities=18% Similarity=0.343 Sum_probs=56.2
Q ss_pred EEEEec----CCceeEEeeeCC--------------CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchh
Q 022783 87 YEVEIE----QPYGLKFAKGRD--------------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYG 148 (292)
Q Consensus 87 ~~v~l~----KPlGl~~~~~~~--------------G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g 148 (292)
..|+|. .++|+.+..+.+ .+++|..|.+++.|+++| |++||+|+++... .+-. ....
T Consensus 9 ~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~---~v~~-~~~~ 83 (109)
T 1q3o_A 9 KTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQ---NVVK-VGHR 83 (109)
T ss_dssp EEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTE---ECTT-CCHH
T ss_pred EEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCC-CCHH
Confidence 456664 478999877643 179999999999999999 9999999998642 1111 1235
Q ss_pred hHHHHhhccCCceEEEEeecc
Q 022783 149 RTMYTIRQRVGPLLMKMQKRY 169 (292)
Q Consensus 149 ~~~~ai~~r~g~v~l~l~r~~ 169 (292)
++...|+.....+.|++.|.-
T Consensus 84 ~~~~~l~~~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 84 QVVNMIRQGGNTLMVKVVMVT 104 (109)
T ss_dssp HHHHHHHHTTTEEEEEEEEEE
T ss_pred HHHHHHHhCCCEEEEEEEECC
Confidence 666777765667888887753
No 285
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.94 E-value=1.5e-05 Score=60.78 Aligned_cols=77 Identities=17% Similarity=0.222 Sum_probs=54.7
Q ss_pred EEEEe--cCCceeEEeeeC--CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceE
Q 022783 87 YEVEI--EQPYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (292)
Q Consensus 87 ~~v~l--~KPlGl~~~~~~--~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~ 162 (292)
+.|+| +.|+|+.+..+. +.+++|..|.|++.|+++| |++||+|+++... .+-.. .+-.+...++....++.
T Consensus 10 ~~v~l~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~---~v~~~-~~~~~~~~~~~~g~~v~ 84 (94)
T 2eeg_A 10 HSVTLRGPSPWGFRLVGGRDFSAPLTISRVHAGSKAALAA-LCPGDLIQAINGE---STELM-THLEAQNRIKGCHDHLT 84 (94)
T ss_dssp EEEEECCSSCCSCCEECCTTTTSCCEECCCCSSSHHHHTT-CCTTCEEEEETTE---ETTTC-CHHHHHHHHHTCCSCEE
T ss_pred EEEEEeCCCccCEEEECccCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHcCCCeEE
Confidence 44444 456778776654 4589999999999999999 9999999998632 22111 23455566666556789
Q ss_pred EEEeec
Q 022783 163 MKMQKR 168 (292)
Q Consensus 163 l~l~r~ 168 (292)
|++.|.
T Consensus 85 l~v~R~ 90 (94)
T 2eeg_A 85 LSVSSG 90 (94)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999884
No 286
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=97.93 E-value=3.5e-05 Score=60.81 Aligned_cols=78 Identities=22% Similarity=0.326 Sum_probs=57.4
Q ss_pred eEEEEec----CCceeEEeee-CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCc
Q 022783 86 EYEVEIE----QPYGLKFAKG-RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGP 160 (292)
Q Consensus 86 ~~~v~l~----KPlGl~~~~~-~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~ 160 (292)
.|.+.|. +.+|+.+.-. ...+++|..|.+++.|+++| |++||+|+++.. ..+-. ..+.++...|+....+
T Consensus 14 p~~~~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing---~~v~~-~~~~~~~~~l~~~g~~ 88 (114)
T 2edz_A 14 PRECKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAG-LLDGDRVLRING---VFVDK-EEHAQVVELVRKSGNS 88 (114)
T ss_dssp CEEEEEECCTTCCCSCEEECCTTCCSCEEECCCTTCTTGGGT-CCTTCEEEEESS---SBCSS-SCHHHHHHHHHHTCSE
T ss_pred CEEEEEeCCCCCcccEEEEEecCCCCeEEEEeCCCChHHHcC-CCCCCEEEEECC---EECCC-CCHHHHHHHHHcCCCE
Confidence 3555553 4688887654 34589999999999999999 999999999863 22222 2345667777765678
Q ss_pred eEEEEeec
Q 022783 161 LLMKMQKR 168 (292)
Q Consensus 161 v~l~l~r~ 168 (292)
|.|++.|.
T Consensus 89 v~l~v~R~ 96 (114)
T 2edz_A 89 VTLLVLDG 96 (114)
T ss_dssp EEEEEECH
T ss_pred EEEEEEEC
Confidence 89999884
No 287
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=97.93 E-value=1.7e-05 Score=78.93 Aligned_cols=83 Identities=6% Similarity=-0.043 Sum_probs=70.5
Q ss_pred HhhHHHHHhhHhHHHHH-HHHHHHHHcC--CHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcC-CHHHHHHHHHHH
Q 022783 203 QNYMKKKEQKERREQDL-REGLQLYRTG--KYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLN-QVKAGLSALEDA 278 (292)
Q Consensus 203 a~Y~kkk~lk~~~~~~~-n~G~~L~k~g--dYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLg-q~eeALe~LekA 278 (292)
..|.+.....++.++++ .++..+.+.+ +|++|++.++++|+++|.+ ..+|++++.++.++| .++++++.++++
T Consensus 94 ~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N---~~aW~~R~~~l~~l~~~~~~el~~~~~~ 170 (567)
T 1dce_A 94 GFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN---FHCWDYRRFVAAQAAVAPAEELAFTDSL 170 (567)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTCCCHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhcccc---ccHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 36666666666667765 8999999999 7799999999999999984 457999999999999 899999999999
Q ss_pred HHhCccChhh
Q 022783 279 LLAGYEDFKV 288 (292)
Q Consensus 279 IelG~~Df~~ 288 (292)
|+..+.|+..
T Consensus 171 I~~~p~n~sa 180 (567)
T 1dce_A 171 ITRNFSNYSS 180 (567)
T ss_dssp TTTTCCCHHH
T ss_pred HHHCCCCccH
Confidence 9999887653
No 288
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=97.92 E-value=1.4e-05 Score=61.90 Aligned_cols=71 Identities=24% Similarity=0.369 Sum_probs=52.9
Q ss_pred CCceeEEeeeCC-CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEeec
Q 022783 93 QPYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKR 168 (292)
Q Consensus 93 KPlGl~~~~~~~-G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r~ 168 (292)
.++|+.+.-..+ ++++|..|.|++.|+++| +++||+|+++.. ..+- .....++...|+....+|.|.+.|.
T Consensus 13 ~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing---~~v~-~~~~~~~~~~l~~~g~~v~l~v~r~ 84 (106)
T 3ngh_A 13 QNYGFFLRIEKDTDGHLIRVIEEGSPAEKAG-LLDGDRVLRING---VFVD-KEEHAQVVELVRKSGNSVTLLVLDG 84 (106)
T ss_dssp CCCCCEEECCTTCCSCEEECCCTTSHHHHTT-CCTTCEEEEETT---EECT-TSCHHHHHHHHHHTTTEEEEEEECH
T ss_pred CeeCEEEEEEeCCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECC---EECC-CCCHHHHHHHHHhCCCEEEEEEEEC
Confidence 367888876543 489999999999999999 999999999863 2221 1123366677776667889999874
No 289
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.92 E-value=1.4e-05 Score=61.94 Aligned_cols=80 Identities=14% Similarity=0.305 Sum_probs=58.5
Q ss_pred EEEEecC---CceeEEeeeC-CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceE
Q 022783 87 YEVEIEQ---PYGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (292)
Q Consensus 87 ~~v~l~K---PlGl~~~~~~-~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~ 162 (292)
..|+|.| ++|+.+.... +.+++|..|.+++.|+++| |++||+|+.+... .+ ....+.++...++.....+.
T Consensus 10 r~v~l~k~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~---~v-~~~~~~~~~~~~~~~~~~v~ 84 (106)
T 2eei_A 10 RLCYLVKEGGSYGFSLKTVQGKKGVYMTDITPQGVAMRAG-VLADDHLIEVNGE---NV-EDASHEEVVEKVKKSGSRVM 84 (106)
T ss_dssp EEEEEECCSSSCSCCEECCSSCCSCEECCCCTTSHHHHHT-CCSSEEEEEETTE---EC-TTCCHHHHHHHHHHHCSEEE
T ss_pred EEEEEEECCCCCCEEEEeccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---EC-CCCCHHHHHHHHHhCCCeEE
Confidence 4566665 6888886543 4589999999999999999 9999999997631 11 12234456667766567889
Q ss_pred EEEeeccCC
Q 022783 163 MKMQKRYGK 171 (292)
Q Consensus 163 l~l~r~~~~ 171 (292)
|.+.|+-..
T Consensus 85 l~v~r~~~~ 93 (106)
T 2eei_A 85 FLLVDKETD 93 (106)
T ss_dssp EEECCTTTS
T ss_pred EEEEcCchh
Confidence 999887654
No 290
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=97.92 E-value=3.8e-05 Score=65.55 Aligned_cols=84 Identities=14% Similarity=0.241 Sum_probs=63.0
Q ss_pred ceEEEEecC----CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCc
Q 022783 85 EEYEVEIEQ----PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGP 160 (292)
Q Consensus 85 ~~~~v~l~K----PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~ 160 (292)
..++|++.| .||+.+.. .+.+++|..|.++|.|+++|.|++||+|+++... .|-. ...-++...++...++
T Consensus 113 ~~~~v~l~~~~~~~lG~~~~~-~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~---~v~~-~~~~~~~~~l~~~~~~ 187 (206)
T 3r0h_A 113 EKFNVDLMKKAGKELGLSLSP-NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGD---ALEG-LPFQVCYALFKGANGK 187 (206)
T ss_dssp EEEEEEEECCTTCCCCEEEEE-CSSCEEEEEECTTSCHHHHHHCCTTCEEEEETTE---ECTT-CCHHHHHHHHHTCCSE
T ss_pred cEEEEEEecCCCCccCeEEEc-CCceEEEEEECCCChHHHcCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHHcCCCe
Confidence 456677643 57888885 3467999999999999999999999999998742 1211 1234567788877889
Q ss_pred eEEEEeeccCCcc
Q 022783 161 LLMKMQKRYGKME 173 (292)
Q Consensus 161 v~l~l~r~~~~~~ 173 (292)
+.|.+.|+....+
T Consensus 188 v~L~V~R~~~~~~ 200 (206)
T 3r0h_A 188 VSMEVTRPKPTLR 200 (206)
T ss_dssp EEEEEEEECCCCC
T ss_pred EEEEEEeCCCCCC
Confidence 9999999776544
No 291
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=97.92 E-value=4e-05 Score=65.38 Aligned_cols=82 Identities=13% Similarity=0.219 Sum_probs=60.5
Q ss_pred cceEEEEecC---CceeEEeeeCC----CCeEEEEeCCCCCcccccCcccCCEEEEeccccCccc--ccccchhhHHHHh
Q 022783 84 YEEYEVEIEQ---PYGLKFAKGRD----GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEI--WPAAEYGRTMYTI 154 (292)
Q Consensus 84 ~~~~~v~l~K---PlGl~~~~~~~----G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~--w~a~~~g~~~~ai 154 (292)
-++++|+|.| +||+.+..+.+ .+++|..|.|++-|+++|.|++||+|+++.. ..+ |... .-.++.++
T Consensus 17 ~~~~~v~~~~~~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng---~~v~~~~~~-~~~~~~~~ 92 (206)
T 3r0h_A 17 NKKILIELKVEKKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDING---TPIHVGSMT-TLKVHQLF 92 (206)
T ss_dssp TSCEEEEEECTTSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETT---EECCGGGSC-HHHHHHHH
T ss_pred CCEEEEEEEeCCCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECC---EEcCCCccC-HHHHHHHH
Confidence 3567788855 89999976543 3799999999999999999999999999863 222 3233 23455677
Q ss_pred hccCCc-eEEEEeecc
Q 022783 155 RQRVGP-LLMKMQKRY 169 (292)
Q Consensus 155 ~~r~g~-v~l~l~r~~ 169 (292)
+...+. +.|++.|.-
T Consensus 93 ~~~~~~~v~l~v~R~~ 108 (206)
T 3r0h_A 93 HTTYEKAVTLTVFRAD 108 (206)
T ss_dssp HSCCSSEEEEEEECCS
T ss_pred HhcCCCceEEEEEecc
Confidence 766666 888888753
No 292
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.91 E-value=1.4e-05 Score=60.92 Aligned_cols=77 Identities=21% Similarity=0.431 Sum_probs=57.4
Q ss_pred EEEEe--cCCceeEEeeeCC--CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceE
Q 022783 87 YEVEI--EQPYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (292)
Q Consensus 87 ~~v~l--~KPlGl~~~~~~~--G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~ 162 (292)
+.|++ ..+||+.+..+.+ .+++|..|.+++.|+++| |++||+|+.+-. ..+-. ..+.++...|+....++.
T Consensus 8 ~~~~~~~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing---~~v~~-~~~~~~~~~l~~~~~~v~ 82 (94)
T 1vb7_A 8 LTVDVAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAAD-LRPGDIIVAING---QSAEN-MLHAEAQSKIRQSASPLR 82 (94)
T ss_dssp EEEEECSSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHT-CCTTCEEEEETT---EECTT-CCHHHHHHHHHTCCSSEE
T ss_pred EEEEecCCCCccEEEecccCCCCCeEEEEECCCCHHHHCC-CCCCCEEEEECC---EECCC-CCHHHHHHHHHhCCCcEE
Confidence 44554 4568888887644 389999999999999999 999999999763 11111 112566778876668999
Q ss_pred EEEeec
Q 022783 163 MKMQKR 168 (292)
Q Consensus 163 l~l~r~ 168 (292)
|++.|.
T Consensus 83 l~v~R~ 88 (94)
T 1vb7_A 83 LQLDRS 88 (94)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 999985
No 293
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.91 E-value=2.6e-05 Score=75.15 Aligned_cols=63 Identities=11% Similarity=-0.143 Sum_probs=57.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHc-----CCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 219 LREGLQLYRTGKYEVAREKFESVLG-----SKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 219 ~n~G~~L~k~gdYeeAIe~fekALe-----ldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
-++|.+|..+|+|++|+..|+++|+ +-|+.++.+..++|+|..|..+|++++|+..+++|+++
T Consensus 333 ~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 333 DCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 4899999999999999999999995 45666678889999999999999999999999999875
No 294
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.90 E-value=1.2e-05 Score=71.26 Aligned_cols=65 Identities=15% Similarity=0.116 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
...+..|..+...|++++|+..|+++|+.+|++ ..+++++|.+|..+|++++|+..++++++...
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~---~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p 182 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQLSNQN---GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQ 182 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSC---HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGC
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcc---hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhc
Confidence 445799999999999999999999999999974 45799999999999999999999999877654
No 295
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.90 E-value=1.8e-05 Score=59.57 Aligned_cols=52 Identities=19% Similarity=0.234 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 232 EVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 232 eeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
++|++.|+++++.+|++ ..+|+++|.+|..+|++++|+..|++|+++..++.
T Consensus 2 ~~a~~~~~~al~~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 53 (115)
T 2kat_A 2 QAITERLEAMLAQGTDN---MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYS 53 (115)
T ss_dssp CCHHHHHHHHHTTTCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHHHHHHhCCCc---HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcH
Confidence 46899999999999974 46899999999999999999999999999987643
No 296
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=97.90 E-value=1.4e-05 Score=60.51 Aligned_cols=78 Identities=18% Similarity=0.303 Sum_probs=56.5
Q ss_pred EEEEecC---CceeEEeeeC-CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceE
Q 022783 87 YEVEIEQ---PYGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (292)
Q Consensus 87 ~~v~l~K---PlGl~~~~~~-~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~ 162 (292)
..|+|.| ++|+.+.... ..+++|..|.|++.|+++| |++||+|+++... -.....+.++..+|+....++.
T Consensus 5 r~v~l~k~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~----~v~~~~~~~~~~~l~~~g~~v~ 79 (91)
T 2vsp_A 5 KLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGV----NVLDEPYEKVVDRIQSSGKNVT 79 (91)
T ss_dssp EEEEEECBTTBTSCCCBCCTTCSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTE----ECTTSCHHHHHHHHTTSCSEEE
T ss_pred EEEEEEeCCCcccEEEEeccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCE----ECCCCCHHHHHHHHHcCCCEEE
Confidence 4566665 5788887643 3589999999999999999 9999999997631 1111255677778886667889
Q ss_pred EEEeecc
Q 022783 163 MKMQKRY 169 (292)
Q Consensus 163 l~l~r~~ 169 (292)
|++.|.-
T Consensus 80 l~v~r~~ 86 (91)
T 2vsp_A 80 LLVCGKK 86 (91)
T ss_dssp EEEEC--
T ss_pred EEEEeCC
Confidence 9998853
No 297
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=97.90 E-value=4.1e-05 Score=61.06 Aligned_cols=78 Identities=17% Similarity=0.230 Sum_probs=57.5
Q ss_pred EEEEecC----CceeEEeeeCCC--CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCc
Q 022783 87 YEVEIEQ----PYGLKFAKGRDG--GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGP 160 (292)
Q Consensus 87 ~~v~l~K----PlGl~~~~~~~G--~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~ 160 (292)
-+|+|.| .+|+.+..+.+. +++|..|.+++.|+++|.|++||+|+++.. ..+ ....+.++...|+...+.
T Consensus 26 ~~V~l~~~~~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing---~~v-~~~~~~~~~~~l~~~~~~ 101 (114)
T 2gzv_A 26 GKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNG---RSI-KGKTKVEVAKMIQEVKGE 101 (114)
T ss_dssp EEEEEECCTTSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETT---EEC-TTCCHHHHHHHHHHCCSE
T ss_pred EEEEEEECCCCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHHcCCCe
Confidence 3455543 389999876543 799999999999999999999999999763 222 113455677788766677
Q ss_pred eEEEEeec
Q 022783 161 LLMKMQKR 168 (292)
Q Consensus 161 v~l~l~r~ 168 (292)
+.|++.+.
T Consensus 102 v~l~v~~~ 109 (114)
T 2gzv_A 102 VTIHYNKL 109 (114)
T ss_dssp EEEEEECC
T ss_pred EEEEEEec
Confidence 88888764
No 298
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=97.90 E-value=6.3e-05 Score=56.31 Aligned_cols=77 Identities=16% Similarity=0.303 Sum_probs=52.5
Q ss_pred ceEEEEecC---CceeEEeeeCC-CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc-c-C
Q 022783 85 EEYEVEIEQ---PYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-R-V 158 (292)
Q Consensus 85 ~~~~v~l~K---PlGl~~~~~~~-G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~-r-~ 158 (292)
+.++|+|.| .+|+.+....+ ++++|..| +++.|+ +| |++||+|+++.. ..+-. ..+.++...|+. . .
T Consensus 3 ~~~~v~l~k~~~g~G~~~~~~~~~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng---~~v~~-~~~~~~~~~l~~~~~g 75 (88)
T 3bpu_A 3 ELITVHIVKGPMGFGFTIADSPGGGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNK---KNVQA-LTHNQVVDMLVESPKG 75 (88)
T ss_dssp EEEEEEEECBTTBSSCEEEECTTSSSEEEEEC-CC--CC-TT-CCTTCEEEEETT---EECTT-SCHHHHHHHHHTSCTT
T ss_pred cEEEEEEEcCCCceeEEEEecCCCCcEEEEEe-cCChhH-hC-CCCCCEEEEECC---EEcCC-CCHHHHHHHHHhCCCC
Confidence 457788866 58889887644 58888887 899888 77 999999999863 22211 113566677773 3 3
Q ss_pred CceEEEEeec
Q 022783 159 GPLLMKMQKR 168 (292)
Q Consensus 159 g~v~l~l~r~ 168 (292)
.++.|++.|.
T Consensus 76 ~~v~l~v~R~ 85 (88)
T 3bpu_A 76 SEVTLLVQRQ 85 (88)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEeC
Confidence 4788888874
No 299
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.89 E-value=6.3e-05 Score=69.72 Aligned_cols=112 Identities=7% Similarity=-0.134 Sum_probs=87.3
Q ss_pred cCCccccccccHHH-HHHHhhccccchhhHHHHHHHhhHHHHHhhHhHHHHH-HHHHHHHHcC--CHHHHHHHHHHHHcC
Q 022783 169 YGKMEQTGELSEKE-IIRAERNSGVISNRVREIQMQNYMKKKEQKERREQDL-REGLQLYRTG--KYEVAREKFESVLGS 244 (292)
Q Consensus 169 ~~~~~~~~~~~e~~-~~~a~rN~GvI~~~l~eiqea~Y~kkk~lk~~~~~~~-n~G~~L~k~g--dYeeAIe~fekALel 244 (292)
.-++-...++.+.. .+++.+..|..+.. ....+.+...+.+..+.++ .+|.++..++ +|++||+.++++|..
T Consensus 23 ~~~i~y~~~y~~~~~~~~a~~~~~e~s~~----aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~ 98 (306)
T 3dra_A 23 ICQILYDEDYKQIMGLLLALMKAEEYSER----ALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALD 98 (306)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHHTTCCSHH----HHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH
T ss_pred ceeeeeCHHHHHHHHHHHHHHHcCCCCHH----HHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence 33444555666665 47888888877631 2345555555555556654 8999999999 999999999999999
Q ss_pred CCCccchhHHHHHHHHHH----Hhc---CCHHHHHHHHHHHHHhCccChh
Q 022783 245 KPTPEESSVASYNVACCY----SKL---NQVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 245 dP~~~d~a~a~YN~Accy----akL---gq~eeALe~LekAIelG~~Df~ 287 (292)
+|++ ..+|+++..++ ..+ ++++++++.|+++++....+|.
T Consensus 99 nPk~---y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~ 145 (306)
T 3dra_A 99 NEKN---YQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHH 145 (306)
T ss_dssp CTTC---CHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHH
T ss_pred Cccc---HHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHH
Confidence 9984 46799999999 888 8999999999999999888774
No 300
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=97.88 E-value=3e-05 Score=59.28 Aligned_cols=73 Identities=18% Similarity=0.429 Sum_probs=54.3
Q ss_pred EEEecC---CceeEEeeeC-CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccc--hhhHHHHhhccCCce
Q 022783 88 EVEIEQ---PYGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGRTMYTIRQRVGPL 161 (292)
Q Consensus 88 ~v~l~K---PlGl~~~~~~-~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~--~g~~~~ai~~r~g~v 161 (292)
.|+|.| .+|+.+..+. .++++|..|.+++.|+++| |++||+|+++... +... +.++..+|+...+.+
T Consensus 12 ~~~l~~~~~g~G~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~------~v~~~~~~~~~~~l~~~~~~~ 84 (98)
T 2jxo_A 12 LCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGV------CMEGKQHGDVVSAIRAGGDET 84 (98)
T ss_dssp EEEEECTTTCCCEEEECCCSSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTE------ECTTCCHHHHHHHHHTTTTEE
T ss_pred EEEEEeCCCcccEEEEecCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE------ECCCCCHHHHHHHHHhCCCcE
Confidence 445554 4888887654 3599999999999999999 9999999997632 2233 667778888766655
Q ss_pred -EEEEee
Q 022783 162 -LMKMQK 167 (292)
Q Consensus 162 -~l~l~r 167 (292)
.|++.|
T Consensus 85 ~~l~v~R 91 (98)
T 2jxo_A 85 KLLVVDR 91 (98)
T ss_dssp EEEECCH
T ss_pred EEEEEEC
Confidence 477766
No 301
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.88 E-value=5.6e-05 Score=71.13 Aligned_cols=93 Identities=16% Similarity=0.124 Sum_probs=69.2
Q ss_pred Hhhccccchhh---HHHHHHH-hhHHHHHhhHhHHHHHHHHHHHHH----cCCHHHHHHHHHHHHcCCCCccchhHHHHH
Q 022783 186 AERNSGVISNR---VREIQMQ-NYMKKKEQKERREQDLREGLQLYR----TGKYEVAREKFESVLGSKPTPEESSVASYN 257 (292)
Q Consensus 186 a~rN~GvI~~~---l~eiqea-~Y~kkk~lk~~~~~~~n~G~~L~k----~gdYeeAIe~fekALeldP~~~d~a~a~YN 257 (292)
+.++.|.+... .+..+++ .++++..........+++|..+.. .+++++|+.+|++|++..+ ..+++|
T Consensus 330 a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~~-----~~a~~~ 404 (490)
T 2xm6_A 330 AQANLGAIYFRLGSEEEHKKAVEWFRKAAAKGEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQGL-----SAAQVQ 404 (490)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC-----HHHHHH
T ss_pred HHHHHHHHHHhCCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCCC-----HHHHHH
Confidence 34455555432 2244444 333333333445567799999999 8999999999999998753 457999
Q ss_pred HHHHHHh----cCCHHHHHHHHHHHHHhCc
Q 022783 258 VACCYSK----LNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 258 ~Accyak----Lgq~eeALe~LekAIelG~ 283 (292)
++.+|.. .+++++|+..+++|++.|.
T Consensus 405 Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 405 LGEIYYYGLGVERDYVQAWAWFDTASTNDM 434 (490)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 9999999 8999999999999999984
No 302
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=97.88 E-value=3.5e-05 Score=59.77 Aligned_cols=79 Identities=19% Similarity=0.327 Sum_probs=57.2
Q ss_pred ceEEEEecC----CceeEEeeeCC--CCeEEEEeCCCCCcccccC-cccCCEEEEeccccCcccccccchhhHHHHhhcc
Q 022783 85 EEYEVEIEQ----PYGLKFAKGRD--GGTYIDAIAPGGSADKTGM-FQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR 157 (292)
Q Consensus 85 ~~~~v~l~K----PlGl~~~~~~~--G~v~V~~v~~ggnA~k~g~-i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r 157 (292)
....|+|.| ++|+.+..+.+ .+++|..|.|++.|+++|. |++||+|+.+... .+-. ...-++...|+..
T Consensus 17 ~~~~v~l~~~~~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~---~v~~-~~~~~~~~~i~~~ 92 (107)
T 3nfk_A 17 NLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGR---DIAE-HTHDQVVLFIKAS 92 (107)
T ss_dssp CCEEEEECCCTTSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTE---ECTT-CCHHHHHHHHHCG
T ss_pred CEEEEEEEcCCCCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCE---ECCC-CCHHHHHHHHHhc
Confidence 446777765 78888876544 3799999999999999995 9999999998632 2211 1223556677655
Q ss_pred C----CceEEEEee
Q 022783 158 V----GPLLMKMQK 167 (292)
Q Consensus 158 ~----g~v~l~l~r 167 (292)
. +.|.|+++|
T Consensus 93 ~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 93 CERHSGELMLLVRP 106 (107)
T ss_dssp GGSBTTBEEEEEEC
T ss_pred cccCCcEEEEEEEc
Confidence 4 489999887
No 303
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=97.87 E-value=3.7e-05 Score=58.23 Aligned_cols=76 Identities=18% Similarity=0.302 Sum_probs=53.8
Q ss_pred EEEecCC---ceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEE
Q 022783 88 EVEIEQP---YGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMK 164 (292)
Q Consensus 88 ~v~l~KP---lGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~ 164 (292)
.|+|.|. +|+.+.. +.+++|..|.+++.|+++| |++||+|+.+... .+ ....+.++...|+...+.+.|.
T Consensus 6 ~v~l~~~~~g~G~~l~~--~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~---~v-~~~~~~~~~~~l~~~~~~v~l~ 78 (91)
T 2f5y_A 6 QITIPRGKDGFGFTICC--DSPVRVQAVDSGGPAERAG-LQQLDTVLQLNER---PV-EHWKCVELAHEIRSCPSEIILL 78 (91)
T ss_dssp EEEEECBTTBTSEEEEC--SSSCEEEEECTTSHHHHHT-CCTTCEEEEETTE---EC-TTCCHHHHHHHHHTCSSEEEEE
T ss_pred EEEEEeCCCCccEEEec--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---EC-CCCCHHHHHHHHHcCCCeEEEE
Confidence 4555544 6666643 4579999999999999999 9999999998642 11 1113445667777656678999
Q ss_pred EeeccC
Q 022783 165 MQKRYG 170 (292)
Q Consensus 165 l~r~~~ 170 (292)
+.|...
T Consensus 79 v~R~~~ 84 (91)
T 2f5y_A 79 VWRMVP 84 (91)
T ss_dssp EEECC-
T ss_pred EEeCCC
Confidence 998644
No 304
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=97.87 E-value=2.7e-05 Score=67.00 Aligned_cols=78 Identities=24% Similarity=0.411 Sum_probs=59.5
Q ss_pred ceEEEEecC----CceeEEeeeC--CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccC
Q 022783 85 EEYEVEIEQ----PYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV 158 (292)
Q Consensus 85 ~~~~v~l~K----PlGl~~~~~~--~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~ 158 (292)
+..+|+|.| ++|+.+..+. +++++|..|.|||.|+++| +++||+|+++... -.....+..+...|+. .
T Consensus 84 ~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~----~v~~~~~~~~~~~l~~-~ 157 (192)
T 3k1r_A 84 KLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVG-LQVGDEIVRINGY----SISSCTHEEVINLIRT-E 157 (192)
T ss_dssp SCEEEEEETTSTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTEEEEEETTE----ECTTCCHHHHHHHHTS-S
T ss_pred ceEEEEEEeCCCCceeEEEEcccccCCCEEEEEECCCChHHHcC-CCCCCEEEEECCE----ECCCCCHHHHHHHHcC-C
Confidence 446677765 5888887653 4489999999999999999 9999999998631 1112225567788888 7
Q ss_pred CceEEEEeec
Q 022783 159 GPLLMKMQKR 168 (292)
Q Consensus 159 g~v~l~l~r~ 168 (292)
++|.|++.|.
T Consensus 158 ~~v~l~v~r~ 167 (192)
T 3k1r_A 158 KTVSIKVRHI 167 (192)
T ss_dssp SEEEEEEEEC
T ss_pred CeEEEEEEEC
Confidence 8899999885
No 305
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.87 E-value=6e-05 Score=58.10 Aligned_cols=78 Identities=12% Similarity=0.173 Sum_probs=56.2
Q ss_pred cceEEEEecC---CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhcc--C
Q 022783 84 YEEYEVEIEQ---PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR--V 158 (292)
Q Consensus 84 ~~~~~v~l~K---PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r--~ 158 (292)
.+.++|+|.| .+|+.+....+ +++|..|.++ |+++| |++||+|+.+.. ..+ ....+.++...|+.. .
T Consensus 9 ~~~~~v~l~~~~~g~G~~i~~~~~-Gv~V~~v~~~--a~~aG-L~~GD~I~~vng---~~v-~~~~~~~~~~~l~~~~~g 80 (96)
T 1ujv_A 9 AELMTLTIVKGAQGFGFTIADSPT-GQRVKQILDI--QGCPG-LCEGDLIVEINQ---QNV-QNLSHTEVVDILKDCPIG 80 (96)
T ss_dssp CCCEEEEEECCSSSSSEEEEEETT-EEEEEEESCG--GGSTT-CCSSCEEEEETT---EEC-SSCCHHHHHHHHHHSCTT
T ss_pred ceEEEEEEEeCCCceeEEEEcCCC-CEEEEEEecc--cccCC-CCCCCEEEEECC---EEC-CCCCHHHHHHHHHcCCCC
Confidence 3568888876 58888865443 6999999994 77787 999999999863 222 111335677888864 4
Q ss_pred CceEEEEeecc
Q 022783 159 GPLLMKMQKRY 169 (292)
Q Consensus 159 g~v~l~l~r~~ 169 (292)
.+|.|++.|.-
T Consensus 81 ~~v~l~v~R~g 91 (96)
T 1ujv_A 81 SETSLIIHRGS 91 (96)
T ss_dssp SEEEEEEECCS
T ss_pred CEEEEEEEECC
Confidence 67899999854
No 306
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=97.86 E-value=3.4e-05 Score=57.89 Aligned_cols=69 Identities=17% Similarity=0.361 Sum_probs=50.2
Q ss_pred CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc--cCCceEEEEeec
Q 022783 94 PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ--RVGPLLMKMQKR 168 (292)
Q Consensus 94 PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~--r~g~v~l~l~r~ 168 (292)
.+|+.+... +++++|..|.|++.|+++| |++||+|+++-. ..+ ....+..+..+|+. ...++.|++.|.
T Consensus 18 ~lG~~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing---~~v-~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 88 (90)
T 2eaq_A 18 DFGFTIKWD-IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINN---TKF-SYNDSKEWEEAMAKAQETGHLVMDVRRY 88 (90)
T ss_dssp CCSEEEEEE-TTEEEEEEECTTSHHHHTT-CCTTCEEEEETT---EEC-CTTCHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred cccEEEEec-CCCEEEEEECCCChHHHcC-CCCCCEEEEECC---EEc-cCCCHHHHHHHHHhcCCCCEEEEEEEeC
Confidence 489888754 5689999999999999999 999999999763 222 01234445556653 245788988874
No 307
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=97.86 E-value=5.6e-05 Score=75.16 Aligned_cols=82 Identities=13% Similarity=-0.031 Sum_probs=69.9
Q ss_pred HhhHHHHHhhHhHHHHH-HHHHHHHHcCC----------HHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcC--CHH
Q 022783 203 QNYMKKKEQKERREQDL-REGLQLYRTGK----------YEVAREKFESVLGSKPTPEESSVASYNVACCYSKLN--QVK 269 (292)
Q Consensus 203 a~Y~kkk~lk~~~~~~~-n~G~~L~k~gd----------YeeAIe~fekALeldP~~~d~a~a~YN~AccyakLg--q~e 269 (292)
..|.+..+..+..+.++ .++.++...++ |++|++.|+++|+.+|++ ..+|++++-++.+++ +++
T Consensus 50 ~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~---y~aW~hR~w~l~~l~~~~~~ 126 (567)
T 1dce_A 50 ELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKS---YGTWHHRCWLLSRLPEPNWA 126 (567)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHTCSSCCHH
T ss_pred HHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcccccHH
Confidence 35656666666556665 88999998888 999999999999999984 568999999999999 779
Q ss_pred HHHHHHHHHHHhCccChh
Q 022783 270 AGLSALEDALLAGYEDFK 287 (292)
Q Consensus 270 eALe~LekAIelG~~Df~ 287 (292)
+|++.|++||++..++|.
T Consensus 127 ~el~~~~k~l~~d~~N~~ 144 (567)
T 1dce_A 127 RELELCARFLEADERNFH 144 (567)
T ss_dssp HHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHhhcccccc
Confidence 999999999999888764
No 308
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.85 E-value=6.3e-05 Score=59.36 Aligned_cols=78 Identities=19% Similarity=0.365 Sum_probs=55.2
Q ss_pred EEEEec--CCceeEEeeeC----CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhcc---
Q 022783 87 YEVEIE--QPYGLKFAKGR----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR--- 157 (292)
Q Consensus 87 ~~v~l~--KPlGl~~~~~~----~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r--- 157 (292)
..|+|. .+||+.+.-+. +.++||..|.++|.|+++|.|++||+|+++-.. .+- ...+.++...|+..
T Consensus 17 ~~v~l~k~~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~---~~~-~~~~~~~~~~l~~~~~r 92 (109)
T 1wi4_A 17 RVITVTKETGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKE---SMI-GVSFEEAKSIITRAKLR 92 (109)
T ss_dssp EEEEECCSSCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTS---CCT-TCCHHHHHHHHHHSCCS
T ss_pred EEEEEeCCCccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCE---ECC-CCCHHHHHHHHHccccC
Confidence 444554 46777777542 227999999999999999999999999998742 221 12355677777744
Q ss_pred -CCceEEEEeec
Q 022783 158 -VGPLLMKMQKR 168 (292)
Q Consensus 158 -~g~v~l~l~r~ 168 (292)
..++.|.+.|.
T Consensus 93 ~~~~~~l~v~R~ 104 (109)
T 1wi4_A 93 SESPWEIAFIRS 104 (109)
T ss_dssp SSSCEEEEEECC
T ss_pred CCceEEEEEEeC
Confidence 35778888874
No 309
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=97.85 E-value=5.3e-05 Score=63.45 Aligned_cols=82 Identities=22% Similarity=0.416 Sum_probs=58.0
Q ss_pred cceEEEEec---CCceeEEeeeC-------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHH
Q 022783 84 YEEYEVEIE---QPYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYT 153 (292)
Q Consensus 84 ~~~~~v~l~---KPlGl~~~~~~-------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~a 153 (292)
++..+|+|. .+||+.+.-+. +.+++|..|.|++-|+++|.|++||+|+++.. ..+-.... -..+.+
T Consensus 4 ~~~~~v~l~~~~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng---~~v~~~~~-~~~~~~ 79 (196)
T 3gsl_A 4 MEYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNE---VDVREVTH-SAAVEA 79 (196)
T ss_dssp EEEEEEEEECBTTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETT---EECTTCCH-HHHHHH
T ss_pred cEEEEEEEEECCCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECC---EECCCCCH-HHHHHH
Confidence 345566666 58999998764 45999999999999999999999999999863 22221111 133445
Q ss_pred hhccCCceEEEEeecc
Q 022783 154 IRQRVGPLLMKMQKRY 169 (292)
Q Consensus 154 i~~r~g~v~l~l~r~~ 169 (292)
++.-..++.|++.|..
T Consensus 80 ~~~~g~~v~l~v~r~~ 95 (196)
T 3gsl_A 80 LKEAGSIVRLYVMRRK 95 (196)
T ss_dssp HHTSCSEEEEEEEEEC
T ss_pred HHhCCCcEEEEEEecC
Confidence 5555567788887754
No 310
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.84 E-value=7.6e-05 Score=59.61 Aligned_cols=82 Identities=16% Similarity=0.214 Sum_probs=57.0
Q ss_pred eEEEEecCCceeEEeeeC---CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhcc----C
Q 022783 86 EYEVEIEQPYGLKFAKGR---DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR----V 158 (292)
Q Consensus 86 ~~~v~l~KPlGl~~~~~~---~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r----~ 158 (292)
.+.+.-...+|+.+..+. .|.++|..|.++|.|+++|.|++||+|+++.. ..+ ....+.++...|+.. .
T Consensus 21 ~~~~~~~~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing---~~v-~~~~~~~~~~~l~~~~~~~g 96 (118)
T 1v6b_A 21 LLRIKKEGSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAING---KIV-TDYTLAEAEAALQKAWNQGG 96 (118)
T ss_dssp EEEEESCSCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESS---CBC-TTCBHHHHHHHHHHHHHHTC
T ss_pred EEEECCCCccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHHHhhhcCC
Confidence 344444567888887653 35799999999999999955999999999763 222 111244555556533 5
Q ss_pred CceEEEEeeccCC
Q 022783 159 GPLLMKMQKRYGK 171 (292)
Q Consensus 159 g~v~l~l~r~~~~ 171 (292)
.+|.|++.|....
T Consensus 97 ~~v~l~v~r~~~~ 109 (118)
T 1v6b_A 97 DWIDLVVAVCPPK 109 (118)
T ss_dssp SEEEEEEECCCSC
T ss_pred CeEEEEEEeCCcc
Confidence 5799999996544
No 311
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.84 E-value=5e-06 Score=60.66 Aligned_cols=70 Identities=11% Similarity=0.125 Sum_probs=51.4
Q ss_pred hhHHHHHhhHhH-H-HHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 204 NYMKKKEQKERR-E-QDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 204 ~Y~kkk~lk~~~-~-~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
.|.+.....+.. . -.+++|..++..|+|++|++.|+++++++|++ ..+|+| +.+.+|+..++++++.
T Consensus 22 ~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~--------~~~~~a~~~~~~~~~~ 90 (99)
T 2kc7_A 22 ALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDS---PALQAR--------KMVMDILNFYNKDMYN 90 (99)
T ss_dssp HHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTS---THHHHH--------HHHHHHHHHHCCTTHH
T ss_pred HHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc---HHHHHH--------HHHHHHHHHHHHHhcc
Confidence 344443333333 3 45699999999999999999999999999974 334554 6678888888888766
Q ss_pred Ccc
Q 022783 282 GYE 284 (292)
Q Consensus 282 G~~ 284 (292)
..+
T Consensus 91 ~p~ 93 (99)
T 2kc7_A 91 QLE 93 (99)
T ss_dssp HHC
T ss_pred Ccc
Confidence 543
No 312
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=97.84 E-value=5.9e-05 Score=58.46 Aligned_cols=79 Identities=24% Similarity=0.358 Sum_probs=58.1
Q ss_pred EEEEecC---CceeEEeeeCC---------C-----CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhh
Q 022783 87 YEVEIEQ---PYGLKFAKGRD---------G-----GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR 149 (292)
Q Consensus 87 ~~v~l~K---PlGl~~~~~~~---------G-----~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~ 149 (292)
..|+|.| ++|+.+..+.+ | .+||..|.+++.|+++| |++||+|+.+.. .-.....+-+
T Consensus 8 r~v~l~k~~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing----~~v~~~~~~~ 82 (107)
T 3qe1_A 8 RVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNG----VNVEGATHKQ 82 (107)
T ss_dssp EEEEEECBTTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETT----EECTTCCHHH
T ss_pred EEEEEEECCCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECC----EECCCCCHHH
Confidence 5677766 48898866522 2 24699999999999999 999999999763 2122224456
Q ss_pred HHHHhhccCCceEEEEeeccC
Q 022783 150 TMYTIRQRVGPLLMKMQKRYG 170 (292)
Q Consensus 150 ~~~ai~~r~g~v~l~l~r~~~ 170 (292)
+..+|+.....+.|++.|...
T Consensus 83 ~~~~l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 83 VVDLIRAGEKELILTVLSVES 103 (107)
T ss_dssp HHHHHHHCSSEEEEEEECSSC
T ss_pred HHHHHHcCCCEEEEEEEcCCC
Confidence 777888667788999998654
No 313
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.80 E-value=8.2e-05 Score=59.78 Aligned_cols=80 Identities=19% Similarity=0.401 Sum_probs=56.8
Q ss_pred EEEEec--CCceeEEeeeCC--CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceE
Q 022783 87 YEVEIE--QPYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (292)
Q Consensus 87 ~~v~l~--KPlGl~~~~~~~--G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~ 162 (292)
+.|++. .++|+.+....+ .+++|..|.+++.|+++| |++||+|+++.. ..+-.... -.++..++. ..++.
T Consensus 24 v~v~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng---~~v~~~~~-~~~~~~~~~-~~~v~ 97 (128)
T 1uf1_A 24 VNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSG-LKVGDQILEVNG---RSFLNILH-DEAVRLLKS-SRHLI 97 (128)
T ss_dssp EEEECCSSCCCCEEEECCTTTTCCCEEEEECTTCHHHHHT-CCTTCEEEEETT---EECSSCCH-HHHHHHHTT-CSEEE
T ss_pred EEEEECCCCccCEEEECcccCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECC---EECCCCCH-HHHHHHHhc-CCeEE
Confidence 445544 579999877543 389999999999999999 999999999863 22222212 345566665 46899
Q ss_pred EEEeeccCCc
Q 022783 163 MKMQKRYGKM 172 (292)
Q Consensus 163 l~l~r~~~~~ 172 (292)
|.+.|.--..
T Consensus 98 l~v~R~g~~~ 107 (128)
T 1uf1_A 98 LTVKDVGRLP 107 (128)
T ss_dssp EEEECCSCCS
T ss_pred EEEEECCccc
Confidence 9998854443
No 314
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.79 E-value=6.1e-05 Score=69.78 Aligned_cols=66 Identities=12% Similarity=0.088 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHcCC--CCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 217 QDLREGLQLYRTGKYEVAREKFESVLGSK--PTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 217 ~~~n~G~~L~k~gdYeeAIe~fekALeld--P~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
-.+++|.++..+|++++|+.+|++++.-. |. ....++||+|.|+.++|+.++|...|++++....+
T Consensus 173 a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~--~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 173 AGVAHGVAAANLALFTEAERRLTEANDSPAGEA--CARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTT--THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCcc--ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 35799999999999999999999998543 43 24557999999999999999999999999998765
No 315
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=97.79 E-value=3e-05 Score=60.11 Aligned_cols=72 Identities=22% Similarity=0.286 Sum_probs=53.9
Q ss_pred EEEEecC----CceeEEeee---------CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCccccccc--chhhHH
Q 022783 87 YEVEIEQ----PYGLKFAKG---------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAA--EYGRTM 151 (292)
Q Consensus 87 ~~v~l~K----PlGl~~~~~---------~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~--~~g~~~ 151 (292)
.+|+|.| ++|+.+... .+.+++|..|.+++.|+++| |++||+|+.+-.. +.. .+.++.
T Consensus 17 ~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~------~v~~~~~~~~~ 89 (104)
T 2z17_A 17 KLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGV------STEGFTYKQVV 89 (104)
T ss_dssp CEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTE------ECTTCCHHHHH
T ss_pred eEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCE------EcCCCCHHHHH
Confidence 4555665 589998762 23599999999999999999 9999999997631 222 556777
Q ss_pred HHhhccCCceEEEE
Q 022783 152 YTIRQRVGPLLMKM 165 (292)
Q Consensus 152 ~ai~~r~g~v~l~l 165 (292)
..|+...++|.|++
T Consensus 90 ~~l~~~~~~v~l~v 103 (104)
T 2z17_A 90 DLIRSSGNLLTIET 103 (104)
T ss_dssp HHHHHTTTEEEEEC
T ss_pred HHHHhCCCcEEEEE
Confidence 88887766666653
No 316
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.76 E-value=4.2e-05 Score=58.87 Aligned_cols=77 Identities=19% Similarity=0.409 Sum_probs=54.1
Q ss_pred eEEEEecC-----CceeEEeeeC--CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccC
Q 022783 86 EYEVEIEQ-----PYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV 158 (292)
Q Consensus 86 ~~~v~l~K-----PlGl~~~~~~--~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~ 158 (292)
..+|+|.| ++|+.+.... +.+++|..|.+++.|+++| |++||+|+++... .+-.... -.++..++. .
T Consensus 9 ~~~v~l~~~~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~---~v~~~~~-~~~~~~~~~-~ 82 (101)
T 1uez_A 9 VRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDK---SLARVTH-AEAVKALKG-S 82 (101)
T ss_dssp CEEECCCCCCTTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHT-CCSSCCEEEETTE---ECSSCCH-HHHHHHSSS-S
T ss_pred cEEEEEEECCCCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCcCH-HHHHHhhcC-C
Confidence 34566655 7999998764 3489999999999999999 9999999998632 2211122 234444443 4
Q ss_pred CceEEEEeec
Q 022783 159 GPLLMKMQKR 168 (292)
Q Consensus 159 g~v~l~l~r~ 168 (292)
.++.|++.|.
T Consensus 83 ~~v~l~v~R~ 92 (101)
T 1uez_A 83 KKLVLSVYSA 92 (101)
T ss_dssp SSCCEEECCC
T ss_pred CeEEEEEEEC
Confidence 5788999875
No 317
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.76 E-value=2.2e-05 Score=60.86 Aligned_cols=76 Identities=21% Similarity=0.293 Sum_probs=58.8
Q ss_pred EEEecCCceeEEeeeCCC--CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccc--hhhHHHHhhccCCceEE
Q 022783 88 EVEIEQPYGLKFAKGRDG--GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGRTMYTIRQRVGPLLM 163 (292)
Q Consensus 88 ~v~l~KPlGl~~~~~~~G--~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~--~g~~~~ai~~r~g~v~l 163 (292)
.+.=..++|+.+..+.|. +++|..|.+++.|+++| |++||+|+.+... +... +.++..+|+....++.|
T Consensus 10 ~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~------~v~~~~~~~~~~~l~~~g~~v~l 82 (103)
T 1v5l_A 10 VLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN-LCPGDVILAIDGF------GTESMTHADAQDRIKAASYQLCL 82 (103)
T ss_dssp EEESSSCCSBCCEEETTTTEEEECSCBCTTSTTGGGT-CCTTCBEEEETTE------ECSSCCHHHHHHHHTTCCSEEEC
T ss_pred EEcCCCCcCEEEeccccCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCE------ECCCCCHHHHHHHHHhCCCeEEE
Confidence 334456899999877643 79999999999999999 9999999997631 2333 66777888876778899
Q ss_pred EEeeccC
Q 022783 164 KMQKRYG 170 (292)
Q Consensus 164 ~l~r~~~ 170 (292)
.+.|.--
T Consensus 83 ~v~R~g~ 89 (103)
T 1v5l_A 83 KIDRAET 89 (103)
T ss_dssp EECCCTT
T ss_pred EEEECCe
Confidence 9988543
No 318
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=97.76 E-value=1.4e-05 Score=68.56 Aligned_cols=58 Identities=21% Similarity=0.190 Sum_probs=51.5
Q ss_pred HHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCH----------HHHHHHHHHHHHhCccCh
Q 022783 226 YRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQV----------KAGLSALEDALLAGYEDF 286 (292)
Q Consensus 226 ~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~----------eeALe~LekAIelG~~Df 286 (292)
-+.++|++|++.|+++++++|++ ..+|+|++.|+..++++ ++|+..|++||++.+++.
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~---aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~ 80 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLD---ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKD 80 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcH
Confidence 46788999999999999999974 56799999999999875 599999999999987754
No 319
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=97.76 E-value=0.00011 Score=57.74 Aligned_cols=71 Identities=15% Similarity=0.405 Sum_probs=52.2
Q ss_pred cCCceeEEeeeC--CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEeec
Q 022783 92 EQPYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKR 168 (292)
Q Consensus 92 ~KPlGl~~~~~~--~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r~ 168 (292)
..+||+.+.... +.+++|..|.+++.|+++| |++||+|+.+... .+-... .-++...++.. +++.|++.|.
T Consensus 26 ~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~---~v~~~~-~~~~~~~~~~~-~~v~l~v~r~ 98 (114)
T 1x5n_A 26 SRGLGCSISSGPIQKPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGV---DFSNLD-HKEAVNVLKSS-RSLTISIVAA 98 (114)
T ss_dssp SCCCCEEEEECCSSSCSEEEEEECTTSTTTTTT-CCTTCEEEEETTE---ETTSCC-TTHHHHHHHHC-SSEEEEECSS
T ss_pred CCceeEEEeecCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCCC-HHHHHHHHhcC-CeEEEEEEcC
Confidence 457899998653 3589999999999999999 9999999998632 221111 23455566644 6899999885
No 320
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.76 E-value=8.1e-05 Score=59.85 Aligned_cols=85 Identities=18% Similarity=0.237 Sum_probs=61.1
Q ss_pred cccccceEEEEecC------CceeEEeee-CC--CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhH
Q 022783 80 QEEKYEEYEVEIEQ------PYGLKFAKG-RD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRT 150 (292)
Q Consensus 80 ~~~~~~~~~v~l~K------PlGl~~~~~-~~--G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~ 150 (292)
+-.+.+.++|+|.| ++|+.+... .+ .+++|..|.+++.|+++| |++||+|+.+-. ..+-.. .+.++
T Consensus 10 e~~~~~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing---~~v~~~-~~~~~ 84 (114)
T 2d8i_A 10 EICPKVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINN---RAADAL-NSSML 84 (114)
T ss_dssp CSSCCEEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHT-CCTTCCEEEESS---CBGGGC-CHHHH
T ss_pred EeccCceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECC---EECCCc-CHHHH
Confidence 33455678888875 589888753 23 389999999999999999 999999999863 222111 23455
Q ss_pred HHHhhccCCceEEEEeeccCC
Q 022783 151 MYTIRQRVGPLLMKMQKRYGK 171 (292)
Q Consensus 151 ~~ai~~r~g~v~l~l~r~~~~ 171 (292)
..+|+.. ++.|++.|....
T Consensus 85 ~~~l~~~--~v~l~v~R~p~~ 103 (114)
T 2d8i_A 85 KDFLSQP--SLGLLVRTYPEL 103 (114)
T ss_dssp HHHHTSS--EEEEEEEECCCS
T ss_pred HHHHhCC--cEEEEEEECCCC
Confidence 6667653 899999997654
No 321
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=97.72 E-value=0.00023 Score=62.93 Aligned_cols=82 Identities=11% Similarity=-0.042 Sum_probs=65.5
Q ss_pred HhhHHHHHhhHhHHH-HHHHHHHHH-------HcCCH-------HHHHHHHHHHHc-CCCCccchhHHHHHHHHHHHhcC
Q 022783 203 QNYMKKKEQKERREQ-DLREGLQLY-------RTGKY-------EVAREKFESVLG-SKPTPEESSVASYNVACCYSKLN 266 (292)
Q Consensus 203 a~Y~kkk~lk~~~~~-~~n~G~~L~-------k~gdY-------eeAIe~fekALe-ldP~~~d~a~a~YN~AccyakLg 266 (292)
..|.+.-...+...+ +++.|..+. +.|++ ++|+..|++||+ ++|++ ..+|++.|.++..+|
T Consensus 37 ~~~~~al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~---~~~~~~~~~~~~~~~ 113 (308)
T 2ond_A 37 FAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKN---MLLYFAYADYEESRM 113 (308)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTC---HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCccc---HHHHHHHHHHHHhcC
Confidence 366666555544433 457787775 46886 999999999999 79973 568999999999999
Q ss_pred CHHHHHHHHHHHHHhCccChh
Q 022783 267 QVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 267 q~eeALe~LekAIelG~~Df~ 287 (292)
++++|+..+++||++...+..
T Consensus 114 ~~~~A~~~~~~al~~~p~~~~ 134 (308)
T 2ond_A 114 KYEKVHSIYNRLLAIEDIDPT 134 (308)
T ss_dssp CHHHHHHHHHHHHTSSSSCTH
T ss_pred CHHHHHHHHHHHHhccccCcc
Confidence 999999999999999876653
No 322
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.71 E-value=7.9e-05 Score=68.50 Aligned_cols=85 Identities=18% Similarity=0.298 Sum_probs=64.6
Q ss_pred cccceEEEEecC----CceeEEeeeCC--CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhh
Q 022783 82 EKYEEYEVEIEQ----PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIR 155 (292)
Q Consensus 82 ~~~~~~~v~l~K----PlGl~~~~~~~--G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~ 155 (292)
...+...|+|.| +||+.+..+.+ .+++|..|.+||.|++++.|++||+|+.|-. ..| ......++...|+
T Consensus 74 ~~~~~r~V~L~k~~~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG---~~v-~~~t~~e~v~~l~ 149 (263)
T 1z87_A 74 LLLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNG---EDL-SSATHDEAVQALK 149 (263)
T ss_dssp TSCSSEEECCCTTTTCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESS---CBC-TTSCHHHHHHHHH
T ss_pred CCCccEEEEEEeCCCCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECC---EEC-CCcCHHHHHHHHh
Confidence 444678899877 58999987754 4899999999999999544999999999763 222 1223456778888
Q ss_pred ccCCceEEEEeeccC
Q 022783 156 QRVGPLLMKMQKRYG 170 (292)
Q Consensus 156 ~r~g~v~l~l~r~~~ 170 (292)
...+.|.|++.|...
T Consensus 150 ~~g~~V~L~V~R~~~ 164 (263)
T 1z87_A 150 KTGKEVVLEVKYMKE 164 (263)
T ss_dssp HCCSCCCEEEECCSS
T ss_pred cCCCeEEEEEEeCcc
Confidence 777889999999543
No 323
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=97.71 E-value=7.8e-05 Score=58.44 Aligned_cols=58 Identities=19% Similarity=0.330 Sum_probs=46.1
Q ss_pred CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEeecc
Q 022783 104 DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRY 169 (292)
Q Consensus 104 ~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r~~ 169 (292)
.+|++|..|.+++.|+++| |++||+|+++.. .+...+.....+|+. ..++.|++.|.-
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing------~~v~~~~~~~~~l~~-~~~v~l~v~R~g 91 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGE------QMVQNAEDVYEAVRT-QSQLAVQIRRGR 91 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETT------EECCSHHHHHHHHHH-CSSEEEEEEETT
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECC------EECCCHHHHHHHHhC-CCeEEEEEEECC
Confidence 5699999999999999999 999999999863 233455566666765 578999998853
No 324
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.70 E-value=6.2e-05 Score=58.94 Aligned_cols=79 Identities=19% Similarity=0.255 Sum_probs=57.2
Q ss_pred eEEEEecC---CceeEEeeeCCC---CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc---
Q 022783 86 EYEVEIEQ---PYGLKFAKGRDG---GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ--- 156 (292)
Q Consensus 86 ~~~v~l~K---PlGl~~~~~~~G---~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~--- 156 (292)
+..|+|.| +||+.+.-+.+. .++|..|.+++.|+++|.|++||+|+.+-. ..+ ....+.++...|+.
T Consensus 7 ~~~v~l~k~~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng---~~v-~~~~~~~~~~~l~~~~~ 82 (103)
T 1ufx_A 7 GTLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNG---LTL-RGKEHREAARIIAEAFK 82 (103)
T ss_dssp SEEEEEECCSSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETT---EEC-TTCBHHHHHHHHHHHHH
T ss_pred eEEEEEEcCCCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHHHhcc
Confidence 35667766 789999876553 469999999999999999999999999863 212 11234456666664
Q ss_pred --cCCceEEEEeec
Q 022783 157 --RVGPLLMKMQKR 168 (292)
Q Consensus 157 --r~g~v~l~l~r~ 168 (292)
...++.|.+.|.
T Consensus 83 ~~~~~~i~l~v~r~ 96 (103)
T 1ufx_A 83 TKDRDYIDFLVTEF 96 (103)
T ss_dssp CSSCSEEEEEECCC
T ss_pred cCCCCeEEEEEEEc
Confidence 356778888774
No 325
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=97.69 E-value=0.00011 Score=57.79 Aligned_cols=79 Identities=22% Similarity=0.330 Sum_probs=54.1
Q ss_pred cccceEEEEecCC------ceeEEeee-CCC--CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHH
Q 022783 82 EKYEEYEVEIEQP------YGLKFAKG-RDG--GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMY 152 (292)
Q Consensus 82 ~~~~~~~v~l~KP------lGl~~~~~-~~G--~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ 152 (292)
|.++.-.|.|.|+ +|+.+... .+| +++|.+|.|++.|+++| +++||+|+.+... -...-.+..+..
T Consensus 3 ~~~~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~----~v~~~~~~~l~~ 77 (94)
T 3kzd_A 3 MGKVTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNR----AADALNSSMLKD 77 (94)
T ss_dssp -CCEEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTE----EGGGCCHHHHHH
T ss_pred cccceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCE----ECCCCCHHHHHH
Confidence 4556666677665 88988774 343 89999999999999999 9999999997632 111123455666
Q ss_pred HhhccCCceEEEEee
Q 022783 153 TIRQRVGPLLMKMQK 167 (292)
Q Consensus 153 ai~~r~g~v~l~l~r 167 (292)
+|+++ ++.|++..
T Consensus 78 ~l~~~--~l~ltV~~ 90 (94)
T 3kzd_A 78 FLSQP--SLGLLVRT 90 (94)
T ss_dssp HHHSS--EEEEEEEE
T ss_pred HHhCC--eEEEEEEe
Confidence 77654 46665543
No 326
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=97.67 E-value=0.00014 Score=62.15 Aligned_cols=81 Identities=17% Similarity=0.359 Sum_probs=59.4
Q ss_pred ceEEEEecC----CceeEEeeeC------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHh
Q 022783 85 EEYEVEIEQ----PYGLKFAKGR------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (292)
Q Consensus 85 ~~~~v~l~K----PlGl~~~~~~------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai 154 (292)
+.++|+|.| .+|+.+..+. +.+++|..|.|++-|+++|.|++||+|+++.. ..+ ....+..+...|
T Consensus 6 ~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng---~~v-~~~~~~~~~~~l 81 (196)
T 1p1d_A 6 ETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAING---IPT-EDSTFEEANQLL 81 (196)
T ss_dssp EEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETT---BCS-TTSCHHHHHHHH
T ss_pred EEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC---EEC-CCCCHHHHHHHH
Confidence 567788766 4899998863 34799999999999999999999999999763 212 111334566777
Q ss_pred hcc--CCceEEEEeecc
Q 022783 155 RQR--VGPLLMKMQKRY 169 (292)
Q Consensus 155 ~~r--~g~v~l~l~r~~ 169 (292)
+.. ...+.|++.|.-
T Consensus 82 ~~~~~g~~v~l~v~R~~ 98 (196)
T 1p1d_A 82 RDSSITSKVTLEIEFDV 98 (196)
T ss_dssp HTCCSSSEEEEEEEECS
T ss_pred HhCCCCCeEEEEEEecC
Confidence 755 346788888754
No 327
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.66 E-value=0.00018 Score=58.01 Aligned_cols=70 Identities=13% Similarity=0.206 Sum_probs=52.3
Q ss_pred CceeEEeeeC-----CCCeEEEEeCC--CCCcccccCcccCCEEEEeccccCcccccccch--hhHHHHhhccCCceEEE
Q 022783 94 PYGLKFAKGR-----DGGTYIDAIAP--GGSADKTGMFQVGDKVLATSAVFGTEIWPAAEY--GRTMYTIRQRVGPLLMK 164 (292)
Q Consensus 94 PlGl~~~~~~-----~G~v~V~~v~~--ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~--g~~~~ai~~r~g~v~l~ 164 (292)
++|+.|.-.. ..+++|..|.+ ++.|+++| |++||+|+++.. . +...+ .++..+|+....++.|+
T Consensus 28 ~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng---~---~v~~~~~~dl~~~l~~~g~~v~l~ 100 (118)
T 2yub_A 28 RRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEING---T---PVRTLRVEEVEDAIKQTSQTLQLL 100 (118)
T ss_dssp SCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESS---S---BTTTSCHHHHHHHHHCCSSCEEEE
T ss_pred CceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECC---E---ECCCcCHHHHHHHHHhCCCEEEEE
Confidence 4677766432 35899999999 99999999 999999999863 2 23333 56677777665578999
Q ss_pred EeeccC
Q 022783 165 MQKRYG 170 (292)
Q Consensus 165 l~r~~~ 170 (292)
+.|.-.
T Consensus 101 v~R~g~ 106 (118)
T 2yub_A 101 IEHDPV 106 (118)
T ss_dssp EEECSS
T ss_pred EEECCE
Confidence 988544
No 328
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=97.65 E-value=0.0001 Score=70.89 Aligned_cols=75 Identities=21% Similarity=0.392 Sum_probs=57.7
Q ss_pred EEecCCceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc-cCC-ceEEEEe
Q 022783 89 VEIEQPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-RVG-PLLMKMQ 166 (292)
Q Consensus 89 v~l~KPlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~-r~g-~v~l~l~ 166 (292)
+.-..+||+.+..++++|++|..|.+||.|+++| |++||+|+.+... .+ ......++...|+. .+| +|.|++.
T Consensus 15 ~~k~~~lG~~i~gg~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~---~v-~~~~~~e~~~~l~~~~~g~~v~l~v~ 89 (391)
T 3tsz_A 15 FRKGDSVGLRLAGGNDVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNV---DF-TNIIREEAVLFLLDLPKGEEVTILAQ 89 (391)
T ss_dssp EECCSSCCEEEEEETTTEEEEEEECTTCHHHHTT-CCTTEEEEEETTE---EC-TTCCHHHHHHHHHHSCTTSEEEEEEE
T ss_pred eecCCceeEEEEecCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---EC-CCCCHHHHHHHHHhhcCCCeEEEEEe
Confidence 3334489999988888999999999999999999 9999999998741 11 11235667778875 455 6888888
Q ss_pred ec
Q 022783 167 KR 168 (292)
Q Consensus 167 r~ 168 (292)
|.
T Consensus 90 r~ 91 (391)
T 3tsz_A 90 KK 91 (391)
T ss_dssp EC
T ss_pred eC
Confidence 75
No 329
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=97.64 E-value=0.00014 Score=60.93 Aligned_cols=81 Identities=26% Similarity=0.461 Sum_probs=59.8
Q ss_pred eEEEEec---CCceeEEeeeC-------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhh
Q 022783 86 EYEVEIE---QPYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIR 155 (292)
Q Consensus 86 ~~~v~l~---KPlGl~~~~~~-------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~ 155 (292)
.++|++. .++|+.+.... +.+++|..|.|+|.|+++|.+++||+|+++-.. .+ ....+.++...|+
T Consensus 101 ~~~v~l~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~---~v-~~~~~~~~~~~l~ 176 (196)
T 3gsl_A 101 VMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSV---GL-EDVMHEDAVAALK 176 (196)
T ss_dssp EEEEEEEEBTTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTE---EC-SSCBHHHHHHHHH
T ss_pred cEEEEEecCCCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCC---cC-CCCCHHHHHHHHH
Confidence 3455543 46888886542 348999999999999999999999999998742 11 1122556778888
Q ss_pred ccCCceEEEEeeccC
Q 022783 156 QRVGPLLMKMQKRYG 170 (292)
Q Consensus 156 ~r~g~v~l~l~r~~~ 170 (292)
....++.|.+.|+-.
T Consensus 177 ~~~~~v~l~v~R~~~ 191 (196)
T 3gsl_A 177 NTYDVVYLKVAKPSN 191 (196)
T ss_dssp SCCEEEEEEEEEESC
T ss_pred cCCCeEEEEEeCCCC
Confidence 777889999998644
No 330
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.64 E-value=0.00024 Score=63.29 Aligned_cols=64 Identities=9% Similarity=-0.032 Sum_probs=55.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCcc--chhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPE--ESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~--d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
..++|..++..|+|++|+..|++++++.|... ....+|+++|.++..+|++++|+..+++|+++
T Consensus 138 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~ 203 (373)
T 1hz4_A 138 VRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENL 203 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 35899999999999999999999998877532 23467999999999999999999999999877
No 331
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=97.63 E-value=0.00011 Score=72.77 Aligned_cols=76 Identities=21% Similarity=0.388 Sum_probs=58.1
Q ss_pred EEEec--CCceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc--cCCceEE
Q 022783 88 EVEIE--QPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ--RVGPLLM 163 (292)
Q Consensus 88 ~v~l~--KPlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~--r~g~v~l 163 (292)
.|++. ++||+.+.-++++|+||..|.+||.|+++| |++||+|+.+... .| ......+++..|+. -.++|.|
T Consensus 4 ~V~l~k~~~lG~~i~gg~~~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~---~v-~~~t~~e~~~~L~~~~~g~~v~L 78 (468)
T 3shw_A 4 LVKFRKGDSVGLRLAGGNDVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNV---DF-TNIIREEAVLFLLDLPKGEEVTI 78 (468)
T ss_dssp EEEEECCSSCCEEEEEETTTEEEEEEECSSSHHHHTT-CCTTEEEEEETTE---EC-TTCCHHHHHHHHHHSCTTSEEEE
T ss_pred EEEEecCCccceEEEccCcCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---EC-CCCCHHHHHHHHHhcCCCCEEEE
Confidence 34554 589999988888999999999999999999 9999999998642 11 11235566778876 3467888
Q ss_pred EEeec
Q 022783 164 KMQKR 168 (292)
Q Consensus 164 ~l~r~ 168 (292)
++.|.
T Consensus 79 ~V~r~ 83 (468)
T 3shw_A 79 LAQKK 83 (468)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88883
No 332
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=97.62 E-value=0.00016 Score=57.66 Aligned_cols=76 Identities=14% Similarity=0.193 Sum_probs=53.1
Q ss_pred EEEecC---CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCc-eEE
Q 022783 88 EVEIEQ---PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGP-LLM 163 (292)
Q Consensus 88 ~v~l~K---PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~-v~l 163 (292)
.|+|.| ++|+.+. .+.+++|..|.|++.|+++| |++||+|+++-.. .+ ......++...|+...+. |.|
T Consensus 26 ~v~l~k~~~~~G~~l~--~~~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~---~v-~~~~~~dv~~~i~~~~~~~v~l 98 (109)
T 2vsv_A 26 SIRFTAEEGDLGFTLR--GNAPVQVHFLDPYCSASVAG-AREGDYIVSIQLV---DC-KWLTLSEVMKLLKSFGEDEIEM 98 (109)
T ss_dssp EEEECCGGGCCCEEEE--SSSSCEEEEECTTSHHHHTT-CCTTCEEEEETTE---EC-TTCCHHHHHHHHHTTTTSCEEE
T ss_pred EEEEEeCCCceeEEEe--CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCE---EC-CCCCHHHHHHHHHhCCCCeEEE
Confidence 455554 4666553 34579999999999999999 9999999998632 11 111345566777766554 999
Q ss_pred EEeeccC
Q 022783 164 KMQKRYG 170 (292)
Q Consensus 164 ~l~r~~~ 170 (292)
++.|+..
T Consensus 99 ~V~~~~~ 105 (109)
T 2vsv_A 99 KVVSLLD 105 (109)
T ss_dssp EEESCC-
T ss_pred EEEECCC
Confidence 9988653
No 333
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.60 E-value=0.00022 Score=54.65 Aligned_cols=66 Identities=15% Similarity=-0.017 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHcCC---HHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 216 EQDLREGLQLYRTGK---YEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 216 ~~~~n~G~~L~k~gd---YeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
.-.+..|..++..++ .++|...+++||+++|++ ..+++.+|..+...|+|++|+..++++++...+
T Consensus 7 ~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~---~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 7 TQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYN---EAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 345688999976655 799999999999999984 457999999999999999999999999998776
No 334
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.60 E-value=0.00019 Score=67.47 Aligned_cols=59 Identities=15% Similarity=0.172 Sum_probs=27.9
Q ss_pred HHHHHHHHH----cCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHh----cCCHHHHHHHHHHHHHhC
Q 022783 219 LREGLQLYR----TGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSK----LNQVKAGLSALEDALLAG 282 (292)
Q Consensus 219 ~n~G~~L~k----~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accyak----Lgq~eeALe~LekAIelG 282 (292)
+++|..+.. .+++++|+++|+++++... ..++++++.+|.. .+++++|+..+++|++.|
T Consensus 151 ~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~~-----~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~ 217 (490)
T 2xm6_A 151 QSMGDAYFEGDGVTRDYVMAREWYSKAAEQGN-----VWSCNQLGYMYSRGLGVERNDAISAQWYRKSATSG 217 (490)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC-----HHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHCC
Confidence 344444444 4444445555544444321 2345555555554 455555555555555544
No 335
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=97.60 E-value=0.00021 Score=60.57 Aligned_cols=71 Identities=20% Similarity=0.395 Sum_probs=53.4
Q ss_pred CCceeEEeeeC----------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceE
Q 022783 93 QPYGLKFAKGR----------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (292)
Q Consensus 93 KPlGl~~~~~~----------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~ 162 (292)
+.||+.+.-+. +.+++|..|.|++.|++ | |++||+|+.+.. ..+-. ...-+++.+++...+.|.
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng---~~v~~-~~~~~~~~~~~~~~~~v~ 75 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANG---YSFIN-IEHGQAVSLLKTFQNTVE 75 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETT---EECTT-CCHHHHHHHHHHCCSEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECC---EECCC-CCHHHHHHHHHcCCCeEE
Confidence 45788887653 35999999999999999 7 999999999752 22222 224466777877777899
Q ss_pred EEEeecc
Q 022783 163 MKMQKRY 169 (292)
Q Consensus 163 l~l~r~~ 169 (292)
|.+.|..
T Consensus 76 l~v~r~~ 82 (195)
T 2qbw_A 76 LIIVREV 82 (195)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 9999953
No 336
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=97.57 E-value=9.4e-05 Score=56.54 Aligned_cols=72 Identities=14% Similarity=0.199 Sum_probs=51.8
Q ss_pred cCCceeEEeeeC----CC-----CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceE
Q 022783 92 EQPYGLKFAKGR----DG-----GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (292)
Q Consensus 92 ~KPlGl~~~~~~----~G-----~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~ 162 (292)
..++|+.+.... ++ +++|..|.+++.|+++| |++||+|+++.. .-.......++...|+.....+.
T Consensus 12 ~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing----~~v~~~~~~~~~~~l~~~g~~v~ 86 (99)
T 3khf_A 12 GKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHING----ESVLGLVHMDVVELLLKSGNKIS 86 (99)
T ss_dssp CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETT----EECTTCCHHHHHHHHHHSCSEEE
T ss_pred CCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECC----EECCCCCHHHHHHHHhcCCCEEE
Confidence 346788776542 11 56899999999999999 999999999763 22222245567777875567788
Q ss_pred EEEeec
Q 022783 163 MKMQKR 168 (292)
Q Consensus 163 l~l~r~ 168 (292)
|++.|.
T Consensus 87 l~v~r~ 92 (99)
T 3khf_A 87 LRTTAL 92 (99)
T ss_dssp EEEECS
T ss_pred EEEEEC
Confidence 888873
No 337
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.57 E-value=0.00012 Score=67.88 Aligned_cols=98 Identities=10% Similarity=-0.044 Sum_probs=74.1
Q ss_pred hccccchhhHH--HHHH--HhhHHHHHhhHhHHHHH-HHHHHH----HHc---CCHHHHHHHHHHHHcCCCCccchhHHH
Q 022783 188 RNSGVISNRVR--EIQM--QNYMKKKEQKERREQDL-REGLQL----YRT---GKYEVAREKFESVLGSKPTPEESSVAS 255 (292)
Q Consensus 188 rN~GvI~~~l~--eiqe--a~Y~kkk~lk~~~~~~~-n~G~~L----~k~---gdYeeAIe~fekALeldP~~~d~a~a~ 255 (292)
...|.+...+. .+++ ..+.+.....++.+..+ .++.++ ... ++++++++.++++|+.+|++ ..+|
T Consensus 71 n~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkn---y~aW 147 (306)
T 3dra_A 71 IYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKN---HHVW 147 (306)
T ss_dssp HHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTC---HHHH
T ss_pred HHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCC---HHHH
Confidence 33444444433 3333 35555555555555554 777777 666 89999999999999999984 4689
Q ss_pred HHHHHHHHhcCCHH--HHHHHHHHHHHhCccChhh
Q 022783 256 YNVACCYSKLNQVK--AGLSALEDALLAGYEDFKV 288 (292)
Q Consensus 256 YN~AccyakLgq~e--eALe~LekAIelG~~Df~~ 288 (292)
+++.-++.+++.++ ++++.++++|+..+.+|..
T Consensus 148 ~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sA 182 (306)
T 3dra_A 148 SYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSA 182 (306)
T ss_dssp HHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHH
Confidence 99999999999999 9999999999999988753
No 338
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.56 E-value=0.00016 Score=66.99 Aligned_cols=131 Identities=10% Similarity=0.080 Sum_probs=89.5
Q ss_pred ccchhhHHHHhhccCCceEEEEe-ec-cCCccccccccHHHH---H-HHhhccccchhhHHHHHHHhhHHHHHhhHhHHH
Q 022783 144 AAEYGRTMYTIRQRVGPLLMKMQ-KR-YGKMEQTGELSEKEI---I-RAERNSGVISNRVREIQMQNYMKKKEQKERREQ 217 (292)
Q Consensus 144 a~~~g~~~~ai~~r~g~v~l~l~-r~-~~~~~~~~~~~e~~~---~-~a~rN~GvI~~~l~eiqea~Y~kkk~lk~~~~~ 217 (292)
.+.+|.-..+++-.++.+.-.+. -+ ||++++ .--+-.+. | ..+...|.+..+...++.... ..+....
T Consensus 64 ~~a~~~~~~~l~l~p~~l~a~~~~~g~y~~~~~-~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~-----~~p~~~~ 137 (282)
T 4f3v_A 64 RRNFGQLSGSVQISMSTLNARIAIGGLYGDITY-PVTSPLAITMGFAACEAAQGNYADAMEALEAAPV-----AGSEHLV 137 (282)
T ss_dssp GGGTTHHHHTTTCCGGGGCCEEECCTTTCCCEE-ECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCC-----TTCHHHH
T ss_pred HHHHHHHHHHhcCChhhhhhhhccCCccccccc-ccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHh-----cCCchHH
Confidence 34566666777777788877776 44 566554 11121221 2 455666776666555554322 1111125
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
.+..|+.+++.++|++|+..|++++...++ .....++||+++++..+|++++|+.+|++|+..
T Consensus 138 ~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~-~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g 200 (282)
T 4f3v_A 138 AWMKAVVYGAAERWTDVIDQVKSAGKWPDK-FLAGAAGVAHGVAAANLALFTEAERRLTEANDS 200 (282)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTTGGGCSCH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHhhccCCc-ccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcC
Confidence 579999999999999999999999876422 112457999999999999999999999999853
No 339
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.54 E-value=0.00033 Score=62.39 Aligned_cols=66 Identities=9% Similarity=-0.044 Sum_probs=56.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCC-----ccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPT-----PEESSVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~-----~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
..++|..+...|+|++|+..|++++++.+. ......+++|+|.+|..+|++++|+..+++|+++..
T Consensus 96 ~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 166 (373)
T 1hz4_A 96 LIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLS 166 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Confidence 358999999999999999999999975431 123456799999999999999999999999998754
No 340
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=97.54 E-value=0.00023 Score=60.76 Aligned_cols=79 Identities=20% Similarity=0.367 Sum_probs=61.0
Q ss_pred ceEEEEec---CCceeEEeeeC------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCccccccc--chhhHHHH
Q 022783 85 EEYEVEIE---QPYGLKFAKGR------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAA--EYGRTMYT 153 (292)
Q Consensus 85 ~~~~v~l~---KPlGl~~~~~~------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~--~~g~~~~a 153 (292)
..+.|++. .++|+.+..+. ..+++|..|.+++.|+++|.+++||+|+.+-. .+.. .+.++..+
T Consensus 106 ~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing------~~v~~~~~~~~~~~ 179 (200)
T 2qt5_A 106 RTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDG------IRLLGTTHAEAMSI 179 (200)
T ss_dssp EEEEEEEECBTTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETT------EECTTCCHHHHHHH
T ss_pred eEEEEEEecCCCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECC------EECCCCCHHHHHHH
Confidence 44666654 45899987653 34899999999999999999999999999763 2333 56677788
Q ss_pred hhccCCceEEEEeecc
Q 022783 154 IRQRVGPLLMKMQKRY 169 (292)
Q Consensus 154 i~~r~g~v~l~l~r~~ 169 (292)
|+....++.|.++|.-
T Consensus 180 l~~~~~~v~l~v~R~~ 195 (200)
T 2qt5_A 180 LKQCGQEATLLIEYDV 195 (200)
T ss_dssp HHTTCSEEEEEEEEEE
T ss_pred HHcCCCeEEEEEEECC
Confidence 8875668899999853
No 341
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=97.52 E-value=0.00017 Score=57.56 Aligned_cols=75 Identities=17% Similarity=0.403 Sum_probs=55.9
Q ss_pred EEEEec---CCceeEEeeeC-CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccc--hhhHHHHhhccCCc
Q 022783 87 YEVEIE---QPYGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGRTMYTIRQRVGP 160 (292)
Q Consensus 87 ~~v~l~---KPlGl~~~~~~-~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~--~g~~~~ai~~r~g~ 160 (292)
..|+|. ..+|+.+..+. .++++|..|.+++.|+++| |++||+|+++... +... +.++..+|+...+.
T Consensus 11 r~v~l~~~~~g~G~~l~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~------~v~~~~~~~~~~~l~~~~~~ 83 (128)
T 2kjd_A 11 RLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGV------CMEGKQHGDVVSAIRAGGDE 83 (128)
T ss_dssp EEEEEECCSSSCCEEEEECSSSCSEEEEEECTTSHHHHHT-CCTTCEEEEETTE------ECTTCCHHHHHHHHHTTCSE
T ss_pred EEEEEecCCCcccEEEEecCCCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCE------ECCCCCHHHHHHHHHhCCCC
Confidence 344444 45888887764 3599999999999999999 9999999998642 2333 66777888876554
Q ss_pred -eEEEEeec
Q 022783 161 -LLMKMQKR 168 (292)
Q Consensus 161 -v~l~l~r~ 168 (292)
+.|.+.|.
T Consensus 84 ~~~l~v~R~ 92 (128)
T 2kjd_A 84 TKLLVVDRE 92 (128)
T ss_dssp EEEEEECHH
T ss_pred EEEEEEEeC
Confidence 45888774
No 342
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.51 E-value=0.00012 Score=60.13 Aligned_cols=83 Identities=13% Similarity=0.231 Sum_probs=59.4
Q ss_pred ceEEEEecC---CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc-cC-C
Q 022783 85 EEYEVEIEQ---PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-RV-G 159 (292)
Q Consensus 85 ~~~~v~l~K---PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~-r~-g 159 (292)
..++++|.| -||+.+.. .+++++|..|.++|.|+++|.|++||+|+++-. ..| ....+.++..+|+. .+ .
T Consensus 27 ~~~~~~l~k~~~glG~~i~~-~~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG---~~v-~~~s~~d~~~~l~~~~~G~ 101 (126)
T 1wif_A 27 KVIQTKLTVGNLGLGLVVIQ-NGPYLQISHLINKGAAASDGILQPGDVLISVGH---ANV-LGYTLREFLKLLQNITIGT 101 (126)
T ss_dssp CEEEEEEECCTTCCCCCEEE-ETTEEEECCCCTTSSGGGCSSSCTTCBEEEESS---SCC-TTCCHHHHHHHHTSCCSSC
T ss_pred ceEEEEEecCCceEeEEEEc-CCCcEEEEEECCCCHHHHcCCCCCCCEEEEECC---EEc-CCCCHHHHHHHHhcCCCCC
Confidence 345666554 35555554 456899999999999999999999999999862 222 11245677788886 33 4
Q ss_pred ceEEEEeeccCCc
Q 022783 160 PLLMKMQKRYGKM 172 (292)
Q Consensus 160 ~v~l~l~r~~~~~ 172 (292)
+|.|++.|.|-.+
T Consensus 102 ~v~l~V~R~~~~i 114 (126)
T 1wif_A 102 VLQIKAYRGFLEI 114 (126)
T ss_dssp EEEEEEESSSSCC
T ss_pred EEEEEEEECCCcc
Confidence 6899999985443
No 343
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.50 E-value=0.00041 Score=55.40 Aligned_cols=59 Identities=5% Similarity=-0.097 Sum_probs=53.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHh----cCCHHHHHHHHHHHHHhCcc
Q 022783 221 EGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSK----LNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 221 ~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~Accyak----Lgq~eeALe~LekAIelG~~ 284 (292)
+|..+...+.+++|+++|++|.+... ..++||++.+|.. .+++++|+..+++|.+.|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g~-----~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~ 93 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELNS-----GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQ 93 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCCC-----HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcCCCH
Confidence 99999999999999999999998743 4689999999999 89999999999999999854
No 344
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.50 E-value=0.00014 Score=55.79 Aligned_cols=77 Identities=19% Similarity=0.321 Sum_probs=56.3
Q ss_pred ceEEEEecC-----CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCC
Q 022783 85 EEYEVEIEQ-----PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVG 159 (292)
Q Consensus 85 ~~~~v~l~K-----PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g 159 (292)
..++|+|.| ++|+.+.. +.+++|..|.+++.|+ +| |++||+|+++.. ..+ ....+-+++..++....
T Consensus 8 ~~~~v~l~~~~~~~~~G~~l~~--~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing---~~v-~~~~~~~~~~~~~~~g~ 79 (96)
T 2edv_A 8 VRHTVKIDKDTLLQDYGFHISE--SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNN---EPA-EDLSWERAVDILREAED 79 (96)
T ss_dssp EEEEEEECCCSSSCSCSBCCCS--SSSCBCCCBCSSSSST-TT-SCTTCBEEEESS---CBS-TTCCHHHHHHHHHHCSS
T ss_pred ccEEEEEEECCCCCcccEEEec--CCCeEEEEECCCCchh-hC-CCCCCEEEEECC---EEC-CCCCHHHHHHHHHcCCC
Confidence 447788875 45666643 5689999999999996 66 999999999763 222 11234466677776677
Q ss_pred ceEEEEeecc
Q 022783 160 PLLMKMQKRY 169 (292)
Q Consensus 160 ~v~l~l~r~~ 169 (292)
+|.|.+.|..
T Consensus 80 ~v~l~v~R~~ 89 (96)
T 2edv_A 80 SLSITVVRCT 89 (96)
T ss_dssp CEEEEEEECC
T ss_pred eEEEEEEECC
Confidence 8999999976
No 345
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.48 E-value=0.0004 Score=68.30 Aligned_cols=65 Identities=11% Similarity=-0.091 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHc-----CCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 217 QDLREGLQLYRTGKYEVAREKFESVLG-----SKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 217 ~~~n~G~~L~k~gdYeeAIe~fekALe-----ldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
+.++++..+..+|+|++|+..|+++|+ +.|+..+....++|+|.+|..+|+|++|+..+++||++
T Consensus 311 ~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i 380 (490)
T 3n71_A 311 DTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDG 380 (490)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 445777788899999999999999995 44666677888999999999999999999999999876
No 346
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=97.47 E-value=0.00036 Score=59.49 Aligned_cols=78 Identities=19% Similarity=0.362 Sum_probs=56.8
Q ss_pred ceEEEEecC----CceeEEeeeC--CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccch--hhHHHHhhc
Q 022783 85 EEYEVEIEQ----PYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEY--GRTMYTIRQ 156 (292)
Q Consensus 85 ~~~~v~l~K----PlGl~~~~~~--~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~--g~~~~ai~~ 156 (292)
..+.|+|.| +||+.+..+. +++++|..|.+++.|+++|.|++||+|+++.. . +...+ .+++.+++.
T Consensus 7 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng---~---~v~~~~~~~~~~~~~~ 80 (200)
T 2qt5_A 7 GSTVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNG---I---NLAKFRHDEIISLLKN 80 (200)
T ss_dssp EEEEEEEECCTTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETT---E---ECTTSCHHHHHHHHHT
T ss_pred CCEEEEEEeCCCCCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECC---E---ECCCCCHHHHHHHHHh
Confidence 446777754 7999998763 45899999999999999944999999999763 2 22222 445566665
Q ss_pred cCCceEEEEeec
Q 022783 157 RVGPLLMKMQKR 168 (292)
Q Consensus 157 r~g~v~l~l~r~ 168 (292)
-..+|.|++.|.
T Consensus 81 ~g~~v~l~v~R~ 92 (200)
T 2qt5_A 81 VGERVVLEVEYE 92 (200)
T ss_dssp CCSEEEEEEEEE
T ss_pred CCCeEEEEEecc
Confidence 556788888875
No 347
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=97.47 E-value=0.00054 Score=65.14 Aligned_cols=114 Identities=7% Similarity=-0.065 Sum_probs=86.6
Q ss_pred eccCCccccccccHHH-HHHHhhccccchhhHHHHHHHhhHHHHHhhHhHHHHH-HHHHHHHHcC-CHHHHHHHHHHHHc
Q 022783 167 KRYGKMEQTGELSEKE-IIRAERNSGVISNRVREIQMQNYMKKKEQKERREQDL-REGLQLYRTG-KYEVAREKFESVLG 243 (292)
Q Consensus 167 r~~~~~~~~~~~~e~~-~~~a~rN~GvI~~~l~eiqea~Y~kkk~lk~~~~~~~-n~G~~L~k~g-dYeeAIe~fekALe 243 (292)
-+.-++....++.+.- .++++...+.... -....+.+...+.+..+..+ .++.++...+ +++++++.++++|.
T Consensus 42 ~~~~~i~y~~~y~~~~~~~r~~~~~~e~se----~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~ 117 (349)
T 3q7a_A 42 NPVVPIMYSEEYKDAMDYFRAIAAKEEKSE----RALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAV 117 (349)
T ss_dssp SCSSCBCCCHHHHHHHHHHHHHHHTTCCSH----HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCeeeeeeCHHHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 3444555656666665 4677777666543 12335555555555556654 8899999999 59999999999999
Q ss_pred CCCCccchhHHHHHHHHHHHhc-C-CHHHHHHHHHHHHHhCccChh
Q 022783 244 SKPTPEESSVASYNVACCYSKL-N-QVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 244 ldP~~~d~a~a~YN~AccyakL-g-q~eeALe~LekAIelG~~Df~ 287 (292)
.+|++ ..+|+++..|+..+ + +++++|+.|+++|+....+|.
T Consensus 118 ~nPKn---y~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~ 160 (349)
T 3q7a_A 118 QNLKS---YQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYH 160 (349)
T ss_dssp TTCCC---HHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHH
T ss_pred hCCCc---HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHH
Confidence 99984 56899999999998 8 999999999999999887764
No 348
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=97.45 E-value=0.00072 Score=63.69 Aligned_cols=82 Identities=6% Similarity=-0.045 Sum_probs=68.6
Q ss_pred hhHHHHHhhHhHHHHH-HHHHHHHHcC--CHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCC-HHHHHHHHHHHH
Q 022783 204 NYMKKKEQKERREQDL-REGLQLYRTG--KYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQ-VKAGLSALEDAL 279 (292)
Q Consensus 204 ~Y~kkk~lk~~~~~~~-n~G~~L~k~g--dYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq-~eeALe~LekAI 279 (292)
.+.......++.++.+ .++..+...+ +|++++++++++|+.+|.+ ..+|+++..+...+|. ++++++.++++|
T Consensus 96 ~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprN---y~AW~~R~~vl~~l~~~~~eel~~~~~~I 172 (331)
T 3dss_A 96 FLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN---FHCWDYRRFVAAQAAVAPAEELAFTDSLI 172 (331)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 5555555555556665 8899999988 4999999999999999984 4589999999999999 699999999999
Q ss_pred HhCccChhh
Q 022783 280 LAGYEDFKV 288 (292)
Q Consensus 280 elG~~Df~~ 288 (292)
+..+.|+..
T Consensus 173 ~~~p~N~SA 181 (331)
T 3dss_A 173 TRNFSNYSS 181 (331)
T ss_dssp HHCSCCHHH
T ss_pred HHCCCCHHH
Confidence 999998764
No 349
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=97.41 E-value=0.0004 Score=53.12 Aligned_cols=73 Identities=11% Similarity=0.157 Sum_probs=54.0
Q ss_pred eEEEEecC----CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCce
Q 022783 86 EYEVEIEQ----PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL 161 (292)
Q Consensus 86 ~~~v~l~K----PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v 161 (292)
...|+|.| ++|+.+. +| +|..|.+++.|+++| +++||+|+.|-.. =.......++...||.-.+.|
T Consensus 5 ~r~v~l~k~~~g~~Gf~i~---~g--~I~~v~~gspA~~aG-l~~GD~Il~VNG~----~v~~~~~~evv~llr~~g~~V 74 (82)
T 1r6j_A 5 PRTITMHKDSTGHVGFIFK---NG--KITSIVKDSSAARNG-LLTEHNICEINGQ----NVIGLKDSQIADILSTSGTVV 74 (82)
T ss_dssp CEEEEEECCTTSCCCEEEE---TT--EEEEECTTSHHHHHT-CCSSEEEEEETTE----ECTTCCHHHHHHHHHHSCSEE
T ss_pred eEEEEEEECCCCCeEEEEE---CC--EEEEecCCCHHHHcC-CCCCCEEEEECCE----EcCCCCHHHHHHHHhcCCCEE
Confidence 36788877 5777774 23 489999999999999 8899999998742 122234567888999656678
Q ss_pred EEEEeec
Q 022783 162 LMKMQKR 168 (292)
Q Consensus 162 ~l~l~r~ 168 (292)
.|++...
T Consensus 75 ~L~v~p~ 81 (82)
T 1r6j_A 75 TITIMPA 81 (82)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 8887654
No 350
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.41 E-value=0.00034 Score=58.32 Aligned_cols=73 Identities=22% Similarity=0.426 Sum_probs=53.0
Q ss_pred EEEEecC----CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhh--HHHHhhccCC-
Q 022783 87 YEVEIEQ----PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR--TMYTIRQRVG- 159 (292)
Q Consensus 87 ~~v~l~K----PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~--~~~ai~~r~g- 159 (292)
.+|+|.| .||+.+... +++++|..|.|++.|+++| |++||+|+++... +...+.. ....++...|
T Consensus 6 r~v~l~k~~~~~lG~~~~~~-~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~------~v~~~~~~~~~~~~~~~~~~ 77 (166)
T 1w9e_A 6 REVILCKDQDGKIGLRLKSI-DNGIFVQLVQANSPASLVG-LRFGDQVLQINGE------NCAGWSSDKAHKVLKQAFGE 77 (166)
T ss_dssp EEEEEECCTTSCCSEEEEEE-TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTE------ECTTCCHHHHHHHHHHCCSS
T ss_pred EEEEEEeCCCCcEeEEEEeC-CCCEEEEEECCCChHHHcC-CCCCCEEEEECCE------ECCCCCHHHHHHHHhcCCCC
Confidence 5677766 689999874 5789999999999999999 9999999998632 2222222 3345555455
Q ss_pred ceEEEEee
Q 022783 160 PLLMKMQK 167 (292)
Q Consensus 160 ~v~l~l~r 167 (292)
++.|++.|
T Consensus 78 ~v~l~vr~ 85 (166)
T 1w9e_A 78 KITMTIRD 85 (166)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEc
Confidence 77888843
No 351
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=97.38 E-value=0.00046 Score=58.88 Aligned_cols=77 Identities=21% Similarity=0.358 Sum_probs=59.9
Q ss_pred eEEEEecC----CceeEEeeeC----CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccc--hhhHHHHhh
Q 022783 86 EYEVEIEQ----PYGLKFAKGR----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGRTMYTIR 155 (292)
Q Consensus 86 ~~~v~l~K----PlGl~~~~~~----~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~--~g~~~~ai~ 155 (292)
.+.|++++ .||+.+.... ..+++|..|.+++.|+++|.+++||+|+.+.. .+... +..+..+|+
T Consensus 108 ~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng------~~v~~~~~~~~~~~l~ 181 (196)
T 1p1d_A 108 TFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDN------IRLDSCSMEDAVQILQ 181 (196)
T ss_dssp CEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETT------EEGGGCCHHHHHHHHH
T ss_pred cEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECC------EECCCCCHHHHHHHHH
Confidence 46777763 5899987642 35899999999999999998999999999763 12333 666777787
Q ss_pred ccCCceEEEEeec
Q 022783 156 QRVGPLLMKMQKR 168 (292)
Q Consensus 156 ~r~g~v~l~l~r~ 168 (292)
....++.|.++|.
T Consensus 182 ~~~~~v~l~v~R~ 194 (196)
T 1p1d_A 182 QCEDLVKLKIRKD 194 (196)
T ss_dssp HCTTCEEEEEECC
T ss_pred hCCCEEEEEEEeC
Confidence 6678899999885
No 352
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=97.38 E-value=0.00024 Score=56.94 Aligned_cols=70 Identities=19% Similarity=0.350 Sum_probs=51.0
Q ss_pred ecCCceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc---cCCceEEEEe
Q 022783 91 IEQPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ---RVGPLLMKMQ 166 (292)
Q Consensus 91 l~KPlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~---r~g~v~l~l~ 166 (292)
-....|+.+.. .++++.|.+|.+|+.|+++| +++||+|+++-. .. .....+.++...|+. ..++|.|.+.
T Consensus 26 ~~~g~G~~l~~-~~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing---~~-v~~~s~~dv~~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 26 QEEDYGFDIEE-KNKAVVVKSVQRGSLAEVAG-LQVGRKIYSINE---DL-VFLRPFSEVESILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp CSSSSSEEEEE-ETTEEEEEEECTTSHHHHHT-CCTTCBEEEETT---EE-STTSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCcccEEEEc-cCCCeEEEEECCCCHHHHcC-CCCCCEEEEECC---EE-cCcCCHHHHHHHHHHhhccCCeEEEEEe
Confidence 34567777776 46689999999999999999 999999999862 22 222345555556654 5788887765
No 353
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.38 E-value=0.00039 Score=71.32 Aligned_cols=83 Identities=22% Similarity=0.404 Sum_probs=63.2
Q ss_pred ceEEEEecC---CceeEEeeeCC-CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCc
Q 022783 85 EEYEVEIEQ---PYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGP 160 (292)
Q Consensus 85 ~~~~v~l~K---PlGl~~~~~~~-G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~ 160 (292)
+...|+|.| +||+.+..+.+ .+++|..|.+||.|+++|.|++||+|+.+.. ..+ ......++..+|+...+.
T Consensus 307 ~~~~v~l~~~~~~lG~~i~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg---~~v-~~~~~~e~~~~l~~~~~~ 382 (721)
T 2xkx_A 307 EPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNG---VDL-RNASHEQAAIALKNAGQT 382 (721)
T ss_pred ceEEEEEEECCCCccEEEeccCCCCCeEEEEeCCCChHHhcCCCccCCEEEEECC---EEC-CCCCHHHHHHHHHhcCCe
Confidence 455677665 58998876544 5999999999999999999999999999874 212 111355677888877888
Q ss_pred eEEEEeeccCC
Q 022783 161 LLMKMQKRYGK 171 (292)
Q Consensus 161 v~l~l~r~~~~ 171 (292)
|.|.+.|....
T Consensus 383 v~L~v~r~~~~ 393 (721)
T 2xkx_A 383 VTIIAQYKPEE 393 (721)
T ss_pred EEEEEEeCchh
Confidence 99999887654
No 354
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.35 E-value=0.00027 Score=54.15 Aligned_cols=64 Identities=22% Similarity=0.449 Sum_probs=46.5
Q ss_pred CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEee
Q 022783 94 PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQK 167 (292)
Q Consensus 94 PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r 167 (292)
++|+.+. .| +|..|.++|.|+++| |++||+|+.+.. ..+ ......++...|+.....+.|++.+
T Consensus 25 ~lG~~~~---~G--~V~~V~~~spA~~aG-L~~GD~Il~Ing---~~v-~~~~~~~~~~~l~~~g~~v~l~v~p 88 (90)
T 1y7n_A 25 QLGFSVQ---NG--IICSLMRGGIAERGG-VRVGHRIIEING---QSV-VATPHEKIVHILSNAVGEIHMKTMP 88 (90)
T ss_dssp CCCEEEE---TT--EEEEECTTSHHHHHT-CCSSCEEEEETT---EEC-TTSCHHHHHHHHHHCCEEEEEEEEC
T ss_pred ccCeEec---CC--EEEEECCCCHHHHcC-CCCCCEEEEECC---EEC-CCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 4777663 23 999999999999999 999999999763 222 1134556777787656677777764
No 355
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.35 E-value=0.00041 Score=65.75 Aligned_cols=80 Identities=19% Similarity=0.306 Sum_probs=52.5
Q ss_pred HHHHHH-hhHHHHHhhHhHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHh----cCC
Q 022783 198 REIQMQ-NYMKKKEQKERREQDLREGLQLYRTG-----KYEVAREKFESVLGSKPTPEESSVASYNVACCYSK----LNQ 267 (292)
Q Consensus 198 ~eiqea-~Y~kkk~lk~~~~~~~n~G~~L~k~g-----dYeeAIe~fekALeldP~~~d~a~a~YN~Accyak----Lgq 267 (292)
+..+++ .|+++..........+++|..|. .| ++++|+.+|++|+ |. ...++||+|.+|.. ..+
T Consensus 265 ~d~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g---~~~A~~~Lg~~y~~G~g~~~d 337 (452)
T 3e4b_A 265 GDVEQMMKYLDNGRAADQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GR---EVAADYYLGQIYRRGYLGKVY 337 (452)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TT---CHHHHHHHHHHHHTTTTSSCC
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CC---CHHHHHHHHHHHHCCCCCCcC
Confidence 333443 33333333333455668887777 44 8888888888888 43 24578888888877 348
Q ss_pred HHHHHHHHHHHHHhCcc
Q 022783 268 VKAGLSALEDALLAGYE 284 (292)
Q Consensus 268 ~eeALe~LekAIelG~~ 284 (292)
+++|+..+++|.+.|..
T Consensus 338 ~~~A~~~~~~Aa~~g~~ 354 (452)
T 3e4b_A 338 PQKALDHLLTAARNGQN 354 (452)
T ss_dssp HHHHHHHHHHHHTTTCT
T ss_pred HHHHHHHHHHHHhhChH
Confidence 88888888888887754
No 356
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.30 E-value=0.00058 Score=61.57 Aligned_cols=65 Identities=12% Similarity=0.165 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccch--------------hHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 217 QDLREGLQLYRTGKYEVAREKFESVLGSKPTPEES--------------SVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 217 ~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~--------------a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
..+++|..+.+.|+|++|++.|.++++..|+..+. ..++++++.+|..+|++++|++.+.+++++
T Consensus 6 ~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~ 84 (434)
T 4b4t_Q 6 SKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEY 84 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 34688999999999999999999999988874221 246899999999999999999999998775
No 357
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=96.36 E-value=4.1e-05 Score=61.01 Aligned_cols=74 Identities=23% Similarity=0.442 Sum_probs=49.9
Q ss_pred EEEEecC----CceeEEeeeCC--CCeEEEEeCCCCCccc-ccCcccCCEEEEeccccCcccccccchhhHHHHhhccCC
Q 022783 87 YEVEIEQ----PYGLKFAKGRD--GGTYIDAIAPGGSADK-TGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVG 159 (292)
Q Consensus 87 ~~v~l~K----PlGl~~~~~~~--G~v~V~~v~~ggnA~k-~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g 159 (292)
.+|+|.| ++|+.+..+.+ .+++|..|.++|.|++ +| |++||+|+++.. ..+ ....+.++..+|+...+
T Consensus 29 ~~v~l~k~~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING---~~v-~~~~~~~~~~~l~~~~~ 103 (112)
T 2lob_A 29 RKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGG-LHVGDAILAVNG---VNL-RDTKHKEAVTILSQQRG 103 (112)
Confidence 4555544 57888776533 4799999999999999 66 999999999763 222 11234455666665555
Q ss_pred ceEEEE
Q 022783 160 PLLMKM 165 (292)
Q Consensus 160 ~v~l~l 165 (292)
.+.|++
T Consensus 104 ~v~l~V 109 (112)
T 2lob_A 104 EIEFEV 109 (112)
Confidence 566554
No 358
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.25 E-value=0.0011 Score=64.28 Aligned_cols=62 Identities=8% Similarity=-0.135 Sum_probs=52.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHc-----CCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 220 REGLQLYRTGKYEVAREKFESVLG-----SKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 220 n~G~~L~k~gdYeeAIe~fekALe-----ldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
+........|+|++|+..|+++|+ +.|+..+....++|+|.+|..+|+|++|+..+++||++
T Consensus 303 e~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i 369 (433)
T 3qww_A 303 EEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKP 369 (433)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 333444567999999999999996 45666677888999999999999999999999999876
No 359
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.25 E-value=0.00096 Score=64.21 Aligned_cols=65 Identities=11% Similarity=-0.017 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHcC-----CCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 217 QDLREGLQLYRTGKYEVAREKFESVLGS-----KPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 217 ~~~n~G~~L~k~gdYeeAIe~fekALel-----dP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
+.++....++.+|+|++|++.|+++|++ .|+.......+.|+|.+|..+|+|++|+..+++||++
T Consensus 289 ~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i 358 (429)
T 3qwp_A 289 ESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEP 358 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 4456666788899999999999999964 4555666788999999999999999999999999876
No 360
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.25 E-value=7.9e-05 Score=59.95 Aligned_cols=60 Identities=15% Similarity=0.352 Sum_probs=46.9
Q ss_pred CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEeecc
Q 022783 105 GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRY 169 (292)
Q Consensus 105 G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r~~ 169 (292)
.+++|..|.+++.|+++| |++||+|+.+-.. .+ ....+.++..+|+.....|.|++.|.-
T Consensus 61 ~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~---~v-~~~~~~~~~~~l~~~g~~v~l~v~r~~ 120 (126)
T 2yuy_A 61 DTIFVKQVKEGGPAFEAG-LCTGDRIIKVNGE---SV-IGKTYSQVIALIQNSDTTLELSVMPKD 120 (126)
T ss_dssp CCCCBCCCCSSSHHHHHT-CCSSCCCCEETTE---EC-SSCCHHHHHHHHHTCTTEEEEECCCCC
T ss_pred CCEEEEEECCCChHHHcC-CCCCCEEEEECCE---EC-CCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 469999999999999999 9999999998632 11 112556777888876778899998854
No 361
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.22 E-value=0.0005 Score=65.15 Aligned_cols=59 Identities=17% Similarity=0.137 Sum_probs=37.2
Q ss_pred HHHHHHHHHc----CCHHHHHHHHHHHHcCCCCccchhHHHHHHHHH-H--HhcCCHHHHHHHHHHHHHhCc
Q 022783 219 LREGLQLYRT----GKYEVAREKFESVLGSKPTPEESSVASYNVACC-Y--SKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 219 ~n~G~~L~k~----gdYeeAIe~fekALeldP~~~d~a~a~YN~Acc-y--akLgq~eeALe~LekAIelG~ 283 (292)
+++|..|... +++++|+.+|+++. |. ...+++|+|.+ | ...+++++|+..+++|++.|.
T Consensus 217 ~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g---~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g~ 282 (452)
T 3e4b_A 217 DSVARVLGDATLGTPDEKTAQALLEKIA---PG---YPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAADQ 282 (452)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHG---GG---STHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHc---CC---CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCCC
Confidence 4666666443 56666666666666 33 23457777776 3 456777777777777777663
No 362
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.19 E-value=0.0007 Score=69.46 Aligned_cols=82 Identities=23% Similarity=0.440 Sum_probs=56.9
Q ss_pred ccceEEEEecC---CceeEEeeeC-------CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHH
Q 022783 83 KYEEYEVEIEQ---PYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMY 152 (292)
Q Consensus 83 ~~~~~~v~l~K---PlGl~~~~~~-------~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ 152 (292)
.++.++|+|.| +||+.+.-+. +.+++|..|.|||-|+++|.|++||+|+.+... .+ ......+++.
T Consensus 57 ~~~~~~v~l~k~~~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~---~v-~~~~~~~~~~ 132 (721)
T 2xkx_A 57 EMEYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEV---DV-REVTHSAAVE 132 (721)
T ss_pred CceEEEEEEEeCCCCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCE---EC-CCCCHHHHHH
Confidence 34567888865 7889887653 458999999999999999999999999998642 11 1111234455
Q ss_pred HhhccCCceEEEEeec
Q 022783 153 TIRQRVGPLLMKMQKR 168 (292)
Q Consensus 153 ai~~r~g~v~l~l~r~ 168 (292)
+|+.-...|.|++.|.
T Consensus 133 ~l~~~g~~v~l~v~R~ 148 (721)
T 2xkx_A 133 ALKEAGSIVRLYVMRR 148 (721)
T ss_pred HhhccccccceEEEec
Confidence 5654444566666554
No 363
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=97.18 E-value=0.00047 Score=65.59 Aligned_cols=99 Identities=12% Similarity=-0.019 Sum_probs=76.3
Q ss_pred hhccccchhhHHH-HHH--HhhHHHHHhhHhHHHHH-HHHHHHHHc-C-CHHHHHHHHHHHHcCCCCccchhHHHHHHHH
Q 022783 187 ERNSGVISNRVRE-IQM--QNYMKKKEQKERREQDL-REGLQLYRT-G-KYEVAREKFESVLGSKPTPEESSVASYNVAC 260 (292)
Q Consensus 187 ~rN~GvI~~~l~e-iqe--a~Y~kkk~lk~~~~~~~-n~G~~L~k~-g-dYeeAIe~fekALeldP~~~d~a~a~YN~Ac 260 (292)
....|.+...++. +++ ..+.+.....++.++.+ .++..+... + +++++++.++++|+.+|++ ..+|+++.-
T Consensus 91 Wn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkN---y~AW~~R~w 167 (349)
T 3q7a_A 91 WQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKN---YHTWAYLHW 167 (349)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTC---HHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCC---HHHHHHHHH
Confidence 3344444444442 333 35555555555556765 888888887 7 9999999999999999984 458999999
Q ss_pred HHHhcCCHH--------HHHHHHHHHHHhCccChhh
Q 022783 261 CYSKLNQVK--------AGLSALEDALLAGYEDFKV 288 (292)
Q Consensus 261 cyakLgq~e--------eALe~LekAIelG~~Df~~ 288 (292)
++.+++.++ ++|+.++++|+..+.||..
T Consensus 168 vl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SA 203 (349)
T 3q7a_A 168 LYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSA 203 (349)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHH
Confidence 999999988 9999999999999888753
No 364
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.17 E-value=0.00036 Score=55.50 Aligned_cols=72 Identities=15% Similarity=0.186 Sum_probs=52.0
Q ss_pred CCceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCC-ceEEEEeeccCC
Q 022783 93 QPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVG-PLLMKMQKRYGK 171 (292)
Q Consensus 93 KPlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g-~v~l~l~r~~~~ 171 (292)
.++|+.+. .+.+++|..|.+++.|+++| |++||+|+++-. ..+- ...+.++...|+...+ ++.|++.|....
T Consensus 26 ~~~G~~l~--~~~~v~V~~V~~~spA~~aG-L~~GD~Il~InG---~~v~-~~~~~d~~~~i~~~~~~~v~l~V~~~~~~ 98 (111)
T 1vae_A 26 GDLGFTLR--GNTPVQVHFLDPHCSASLAG-AKEGDYIVSIQG---VDCK-WLTVSEVMKLLKSFGGEEVEMKVVSLLDS 98 (111)
T ss_dssp SCCSCCEE--SSSSCEECCCCTTSSHHHHH-CCTTCEEEEETT---EECS-SCCHHHHHHHHHHTTTSEECEEEECEECC
T ss_pred CcccEEEe--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECC---EECC-CCCHHHHHHHHHhCCCceEEEEEEecCCC
Confidence 45676663 24579999999999999999 999999999863 2221 1245566777776555 489999887554
No 365
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=97.06 E-value=0.0019 Score=60.78 Aligned_cols=80 Identities=14% Similarity=-0.022 Sum_probs=63.3
Q ss_pred hHHHHHhhHhHHHHH-HHHHHHHHcCC----------HHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCC--HHHH
Q 022783 205 YMKKKEQKERREQDL-REGLQLYRTGK----------YEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQ--VKAG 271 (292)
Q Consensus 205 Y~kkk~lk~~~~~~~-n~G~~L~k~gd----------YeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq--~eeA 271 (292)
+.+.....+..+..+ .++.++...++ |++++..++++|..+|++ ..+|++++.++..+++ ++++
T Consensus 53 t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKn---y~aW~hR~wlL~~l~~~~~~~E 129 (331)
T 3dss_A 53 TSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKS---YGTWHHRCWLLSRLPEPNWARE 129 (331)
T ss_dssp HHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHCSSCCHHHH
T ss_pred HHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHhccCcccHHHH
Confidence 333344444445554 67777766655 799999999999999984 5689999999999994 9999
Q ss_pred HHHHHHHHHhCccChh
Q 022783 272 LSALEDALLAGYEDFK 287 (292)
Q Consensus 272 Le~LekAIelG~~Df~ 287 (292)
++.|++++++...+|.
T Consensus 130 L~~~~k~l~~dprNy~ 145 (331)
T 3dss_A 130 LELCARFLEADERNFH 145 (331)
T ss_dssp HHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHhCCCCHH
Confidence 9999999999888774
No 366
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=97.03 E-value=0.0046 Score=58.60 Aligned_cols=80 Identities=11% Similarity=-0.036 Sum_probs=56.2
Q ss_pred hhHHHHHhhHhHHH-HHHHHHHHHH-------cCCHH-------HHHHHHHHHHc-CCCCccchhHHHHHHHHHHHhcCC
Q 022783 204 NYMKKKEQKERREQ-DLREGLQLYR-------TGKYE-------VAREKFESVLG-SKPTPEESSVASYNVACCYSKLNQ 267 (292)
Q Consensus 204 ~Y~kkk~lk~~~~~-~~n~G~~L~k-------~gdYe-------eAIe~fekALe-ldP~~~d~a~a~YN~AccyakLgq 267 (292)
.|.++....+...+ +++.|..+.+ .|+++ +|++.|++|++ ++|++ ..+|++.+.++..+|+
T Consensus 260 ~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~---~~l~~~~~~~~~~~g~ 336 (530)
T 2ooe_A 260 AYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKN---MLLYFAYADYEESRMK 336 (530)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSC---HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCccc---HHHHHHHHHHHHhcCC
Confidence 45555444443333 3477777664 68876 88888888886 77753 4578888888888888
Q ss_pred HHHHHHHHHHHHHhCccCh
Q 022783 268 VKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 268 ~eeALe~LekAIelG~~Df 286 (292)
+++|...+++|+++...++
T Consensus 337 ~~~A~~~~~~al~~~p~~~ 355 (530)
T 2ooe_A 337 YEKVHSIYNRLLAIEDIDP 355 (530)
T ss_dssp HHHHHHHHHHHHHSSSSCH
T ss_pred HHHHHHHHHHHhCccccCc
Confidence 8888888888888766553
No 367
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=96.98 E-value=0.0018 Score=61.47 Aligned_cols=67 Identities=10% Similarity=0.015 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
.-++..|..+.+.|++++|++.|+++|+++|+. ...+|.+.+.++.++|++++|+..+++|++....
T Consensus 322 ~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~ 388 (530)
T 2ooe_A 322 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDID--PTLVYIQYMKFARRAEGIKSGRMIFKKAREDART 388 (530)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhCccccC--chHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC
Confidence 334588888888999999999999999998863 2347888888888888888888888888876543
No 368
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=96.96 E-value=0.0019 Score=50.43 Aligned_cols=58 Identities=21% Similarity=0.488 Sum_probs=44.4
Q ss_pred CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEeecc
Q 022783 104 DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRY 169 (292)
Q Consensus 104 ~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r~~ 169 (292)
..|++|..|.+++.|+++| |++||+|+++.. . +...+.....+++ ...++.|++.|.-
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing---~---~v~~~~~~~~~l~-~g~~v~l~v~R~g 91 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNG---R---PLVDSSELQEAVL-TESPLLLEVRRGN 91 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEETT---E---ECCSHHHHHHHHH-HCSSEEEEEEETT
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEECC---E---ECCCHHHHHHHHh-CCCeEEEEEEECC
Confidence 4689999999999999999 999999999863 2 3334555556664 3457899998853
No 369
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=96.94 E-value=0.0023 Score=52.20 Aligned_cols=57 Identities=9% Similarity=0.157 Sum_probs=43.4
Q ss_pred CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhcc-CC-ceEEEEeec
Q 022783 104 DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR-VG-PLLMKMQKR 168 (292)
Q Consensus 104 ~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r-~g-~v~l~l~r~ 168 (292)
..+++|..|.+++.|+ +| |++||+|+++.. . +..++.....+|... +| ++.|++.|.
T Consensus 56 ~~g~~V~~V~~~spA~-aG-L~~GD~I~~inG---~---~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 114 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GH-LEKYDVITKVDD---K---EIASSTDLQSALYNHSIGDTIKITYYRN 114 (134)
T ss_dssp CSCEEEEECSTTSGGG-TT-SCSSCEEEEETT---E---ECCCHHHHHHHHHHSSTTCEEEEEEEET
T ss_pred CCCEEEEEECCCCchH-HC-CCCCCEEEEECC---E---EcCCHHHHHHHHHhCCCCCEEEEEEEEC
Confidence 4689999999999999 98 999999999763 2 333445566666654 44 689999884
No 370
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=96.93 E-value=0.00066 Score=60.36 Aligned_cols=76 Identities=16% Similarity=0.413 Sum_probs=54.0
Q ss_pred EEEEecC---CceeEEeeeCC-CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCce-
Q 022783 87 YEVEIEQ---PYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL- 161 (292)
Q Consensus 87 ~~v~l~K---PlGl~~~~~~~-G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v- 161 (292)
..|+|.| .+|+.+..+.+ ++++|..|.+|+.|+++| |++||+|+.|-. ..+ ....+..+...|+.....|
T Consensus 11 r~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG---~~V-~~~s~~dl~~~l~~~g~~v~ 85 (216)
T 2krg_A 11 RLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNG---VCM-EGKQHGDVVSAIRAGGDETK 85 (216)
T ss_dssp EEEEEECCSSSSCEEECCCSSSCSCBEEEECTTSHHHHHT-CCTTCBCCEETT---EEC-TTCCTHHHHHHHHHHCSEEE
T ss_pred EEEEEEeCCCCceEEEEecCCCCCeEEEEeCCCChHHHcC-CCCCCEEEEECC---EEC-CCCCHHHHHHHHHhcCCeEE
Confidence 4455544 47888876543 399999999999999999 999999999863 111 1124556677777655567
Q ss_pred EEEEee
Q 022783 162 LMKMQK 167 (292)
Q Consensus 162 ~l~l~r 167 (292)
.|++.|
T Consensus 86 ~l~V~R 91 (216)
T 2krg_A 86 LLVVDR 91 (216)
T ss_dssp EEECCH
T ss_pred EEEEEE
Confidence 777766
No 371
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=96.92 E-value=0.00069 Score=64.69 Aligned_cols=78 Identities=18% Similarity=0.331 Sum_probs=55.7
Q ss_pred EEEEecC----CceeEEeeeCCC----CeEEEEeCCCCCcccccCcccCCEEEEeccccCccc--ccccchhhHHHHhhc
Q 022783 87 YEVEIEQ----PYGLKFAKGRDG----GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEI--WPAAEYGRTMYTIRQ 156 (292)
Q Consensus 87 ~~v~l~K----PlGl~~~~~~~G----~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~--w~a~~~g~~~~ai~~ 156 (292)
-+|+|.| +||+.+....+| +++|..|.|||-|+++|.|++||+|+++.. ..+ |+.. .+...|+.
T Consensus 206 ~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG---~~v~~~~~~---~~~~~l~~ 279 (388)
T 3suz_A 206 KELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSING---TSLVGLPLA---TCQGIIKG 279 (388)
T ss_dssp EEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETT---EECSSCCST---THHHHTTT
T ss_pred eEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECC---EEccCCCHH---HHHHHHHh
Confidence 4566655 699999886656 799999999999999999999999999873 222 3323 34456664
Q ss_pred c--CCceEEEEeeccC
Q 022783 157 R--VGPLLMKMQKRYG 170 (292)
Q Consensus 157 r--~g~v~l~l~r~~~ 170 (292)
. ..++.|++.|...
T Consensus 280 ~~~~~~v~l~v~r~~~ 295 (388)
T 3suz_A 280 LKNQTQVKLNIVSCPP 295 (388)
T ss_dssp CTTCSCEEEEEEECCS
T ss_pred ccCCCccccccccccc
Confidence 3 3458999988643
No 372
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=96.91 E-value=0.0028 Score=55.14 Aligned_cols=70 Identities=11% Similarity=0.152 Sum_probs=51.8
Q ss_pred CceeEEeee-----CCCCeEEEEeCCCCCcccccCccc-CCEEEEeccccCcccccccchhhHHHHhhcc-CCceEEEEe
Q 022783 94 PYGLKFAKG-----RDGGTYIDAIAPGGSADKTGMFQV-GDKVLATSAVFGTEIWPAAEYGRTMYTIRQR-VGPLLMKMQ 166 (292)
Q Consensus 94 PlGl~~~~~-----~~G~v~V~~v~~ggnA~k~g~i~v-GD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r-~g~v~l~l~ 166 (292)
-||+.+..- ...|++|.+|.+++.|+++| +++ ||+|+.+. ..+-..+++ ..+|+.. ..++.|.+.
T Consensus 96 ~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~in----g~v~~~~~l---~~~l~~~~g~~v~l~v~ 167 (209)
T 3rle_A 96 LLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGAD----TVMNESEDL---FSLIETHEAKPLKLYVY 167 (209)
T ss_dssp SSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEES----SCCCSSSCH---HHHHHHTTTSCEEEEEE
T ss_pred ccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECC----CEeCCHHHH---HHHHHhCCCCeEEEEEE
Confidence 478888742 23689999999999999999 999 99999984 334444444 4455543 456899999
Q ss_pred eccCC
Q 022783 167 KRYGK 171 (292)
Q Consensus 167 r~~~~ 171 (292)
|.-++
T Consensus 168 r~~~~ 172 (209)
T 3rle_A 168 NTDTD 172 (209)
T ss_dssp ETTTT
T ss_pred ECCce
Confidence 97664
No 373
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.81 E-value=0.0068 Score=50.21 Aligned_cols=72 Identities=14% Similarity=0.106 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHHHHcCCHHH---HHHHHHHHHcCC-CCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccChh
Q 022783 214 RREQDLREGLQLYRTGKYEV---AREKFESVLGSK-PTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 214 ~~~~~~n~G~~L~k~gdYee---AIe~fekALeld-P~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df~ 287 (292)
.....|+.|..|.+...-.+ +|..++..+..+ |. .....+|++|..|+++|+|++|+..|+..|+.-+++-+
T Consensus 34 s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~--~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~Q 109 (126)
T 1nzn_A 34 SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKE--EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQ 109 (126)
T ss_dssp CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHH--HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcc--hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHH
Confidence 34667899999988877766 999999999876 53 34567999999999999999999999999999887644
No 374
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=96.78 E-value=0.004 Score=47.97 Aligned_cols=59 Identities=10% Similarity=0.131 Sum_probs=43.6
Q ss_pred CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc-c-CCceEEEEeecc
Q 022783 103 RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-R-VGPLLMKMQKRY 169 (292)
Q Consensus 103 ~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~-r-~g~v~l~l~r~~ 169 (292)
...|++|..|.+++.|++ | |++||+|+++-. . +...+.....++.. + ..++.|++.|.-
T Consensus 5 ~~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing---~---~v~~~~dl~~~l~~~~~g~~v~l~v~R~g 65 (100)
T 3i18_A 5 TYDGVYVMSVKDDVPAAD-V-LHAGDLITEIDG---N---AFKSSQEFIDYIHSKKVGDTVKINYKHGD 65 (100)
T ss_dssp CCCCEEEEEECTTSGGGG-T-CCTTCEEEEETT---B---CCSSHHHHHHHHHTSCTTCEEEEEEEETT
T ss_pred eCCCEEEEEeCCCCchHH-C-CCCCCEEEEECC---E---ECCCHHHHHHHHHhCCCCCEEEEEEEECC
Confidence 357999999999999995 7 999999999763 2 33444555666664 2 356888888853
No 375
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=96.76 E-value=0.0006 Score=50.85 Aligned_cols=64 Identities=6% Similarity=-0.065 Sum_probs=46.3
Q ss_pred HHhhccccchhhHHHHHHH--hhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCc
Q 022783 185 RAERNSGVISNRVREIQMQ--NYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTP 248 (292)
Q Consensus 185 ~a~rN~GvI~~~l~eiqea--~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~ 248 (292)
.+.++.|.+...+++.+++ .|.+...+.+.. .-++++|..+.+.|+|++|++.|+++|++.|+.
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 3455666666666666664 454555444443 445799999999999999999999999988754
No 376
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=96.76 E-value=0.003 Score=58.12 Aligned_cols=68 Identities=21% Similarity=0.321 Sum_probs=51.1
Q ss_pred ceeEEeee-----------CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc-cC-Cce
Q 022783 95 YGLKFAKG-----------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-RV-GPL 161 (292)
Q Consensus 95 lGl~~~~~-----------~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~-r~-g~v 161 (292)
|||.+..- ...+++|..|.|++.|+++| |++||+|+++.. . +...+.+...+|+. ++ .++
T Consensus 223 lGi~~~~~~~~~~~~~g~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing---~---~v~~~~~l~~~l~~~~~g~~v 295 (318)
T 1te0_A 223 IGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAG-IQVNDLIISVDN---K---PAISALETMDQVAEIRPGSVI 295 (318)
T ss_dssp CCEEEEECSCCCSSSSCSSSCCCEEEEEECTTSTTTTTC-CCTTCCEEEETT---E---ECCCHHHHHHHHHTSCTTCEE
T ss_pred ceeEeeecchhHHHhccCCCCCcEEEEEeCCCChHHHCC-CCCCCEEEEECC---E---EcCCHHHHHHHHHhcCCCCEE
Confidence 68877652 24689999999999999999 999999999763 2 33344566677775 44 468
Q ss_pred EEEEeecc
Q 022783 162 LMKMQKRY 169 (292)
Q Consensus 162 ~l~l~r~~ 169 (292)
.|++.|.-
T Consensus 296 ~l~v~R~g 303 (318)
T 1te0_A 296 PVVVMRDD 303 (318)
T ss_dssp EEEEESSS
T ss_pred EEEEEECC
Confidence 99998853
No 377
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=96.74 E-value=0.0022 Score=49.05 Aligned_cols=58 Identities=16% Similarity=0.321 Sum_probs=44.3
Q ss_pred CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhcc--CCceEEEEeecc
Q 022783 104 DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR--VGPLLMKMQKRY 169 (292)
Q Consensus 104 ~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r--~g~v~l~l~r~~ 169 (292)
..|++|..|.+++.|++ | |++||+|+++.. . +...+.+...+|+.. ..++.|.+.|.-
T Consensus 4 ~~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG---~---~v~~~~~l~~~l~~~~~g~~v~l~v~R~g 63 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-R-LEAGDRIAAIDG---Q---PINTSEQIVSYVREKQAGDRVRVTFIRDR 63 (94)
T ss_dssp CCCEECCCCCTTSTTBT-T-BCTTCEEEEETT---B---CCCCHHHHHHHHHHSCTTCCEEEEEEETT
T ss_pred CCcEEEEEECCCChHHh-C-CCCCCEEEEECC---E---ECCCHHHHHHHHHhCCCCCEEEEEEEECC
Confidence 45799999999999998 8 999999999863 2 333445666777754 457899998853
No 378
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=96.72 E-value=0.0015 Score=66.17 Aligned_cols=66 Identities=17% Similarity=0.260 Sum_probs=49.0
Q ss_pred CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc-c-CCceEEEEeec
Q 022783 94 PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-R-VGPLLMKMQKR 168 (292)
Q Consensus 94 PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~-r-~g~v~l~l~r~ 168 (292)
-||+.+.+. +||+.|..|.++|.|+++| |++||+|+++. |..+ ..+++ ..+|+. + ..+|.|++.|.
T Consensus 486 ~lG~~~~~~-~~gv~V~~V~~~spA~~AG-L~~GD~I~aIn---G~~v-~~~~l---~~~l~~~~~g~~v~l~v~R~ 553 (597)
T 4fgm_A 486 NFGAKYKAS-PQGLDVLNVYHDESAYHAG-LSAGDKIIAID---HLQA-TEQSV---KRILERYIPGDTVTIHAFRR 553 (597)
T ss_dssp CCSEEEEEE-TTEEEEEEECTTSHHHHHT-CCTTCEEEEET---TEEC-CTTTH---HHHHTTCCTTCEEEEEEEET
T ss_pred ccceEEecc-CCeEEEEEeCCCChHHHCC-CCCCCEEEEEC---CEEC-CHHHH---HHHHHhcCCCCEEEEEEEEC
Confidence 488888775 4689999999999999999 99999999986 3333 33444 444543 3 34678888885
No 379
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=96.72 E-value=0.0029 Score=60.92 Aligned_cols=60 Identities=8% Similarity=0.013 Sum_probs=52.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 221 EGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 221 ~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
.|..+...|++++|+..+++||.++|+ ..+|.-++.++...|++++|++.+++|+.+.+.
T Consensus 283 lal~~l~~gd~d~A~~~l~rAl~Ln~s----~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~ 342 (372)
T 3ly7_A 283 KAVSALVKGKTDESYQAINTGIDLEMS----WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPG 342 (372)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHhCCCHHHHHHHHHHHHhcCCC----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 455566689999999999999999985 356788899999999999999999999999865
No 380
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.65 E-value=0.0091 Score=53.70 Aligned_cols=65 Identities=14% Similarity=0.127 Sum_probs=54.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCC---ccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPT---PEESSVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~---~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
..++|..+...|+|++|+..+++++..... ......+|.+.+.+|..+|++++|...+++|+..-
T Consensus 138 ~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 138 SIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 358999999999999999999999843221 12345689999999999999999999999997763
No 381
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=96.60 E-value=0.0018 Score=48.65 Aligned_cols=69 Identities=14% Similarity=0.138 Sum_probs=46.7
Q ss_pred cCCceeEEeeeCCC---CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc-c-CCceEEEEe
Q 022783 92 EQPYGLKFAKGRDG---GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-R-VGPLLMKMQ 166 (292)
Q Consensus 92 ~KPlGl~~~~~~~G---~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~-r-~g~v~l~l~ 166 (292)
-+-+|+.-... +| |+.|..+.|++.|+++| |++||+|+.+.. ..+ .++...+.++.. + ..++.|.+.
T Consensus 4 ~~~~~~~p~~~-~g~~~G~~V~~~~~~s~A~~aG-l~~GD~I~~ing---~~v---~~~~d~~~~~~~~~~g~~v~l~v~ 75 (87)
T 2i6v_A 4 FQYVRLSQVKR-DDKVLGYRVSPGKDPVLFESIG-LQDGDMAVALNG---LDL---TDPNVMNTLFQSMNEMTEMSLTVE 75 (87)
T ss_dssp GGTEEEEEEEE-TTEEEEEEEEECSCHHHHHHTT-CCTTCEEEEETT---EET---TCHHHHHHHHHTGGGCSEEEEEEE
T ss_pred HhccceEEEee-CCeEEEEEEEeCCCCCHHHHCC-CCCCCEEEEECC---EEC---CCHHHHHHHHHhcCCCCEEEEEEE
Confidence 34466665543 44 67788888888889999 999999999863 333 334444455543 2 357899998
Q ss_pred ec
Q 022783 167 KR 168 (292)
Q Consensus 167 r~ 168 (292)
|.
T Consensus 76 R~ 77 (87)
T 2i6v_A 76 RD 77 (87)
T ss_dssp ET
T ss_pred EC
Confidence 84
No 382
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=96.60 E-value=0.0012 Score=50.62 Aligned_cols=56 Identities=16% Similarity=0.309 Sum_probs=42.7
Q ss_pred CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhcc--CCceEEEEeecc
Q 022783 106 GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR--VGPLLMKMQKRY 169 (292)
Q Consensus 106 ~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r--~g~v~l~l~r~~ 169 (292)
|++|..|.|++.|++ | |++||+|+++.. . +...+.+...+|+.. ..++.|++.|.-
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG---~---~v~~~~~l~~~l~~~~~g~~v~l~v~R~g 59 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADG---K---NYQSAEKLIDYISSKKAGDKVTLKIEREE 59 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETT---B---CCSSHHHHHHHHSSCCSSCEECEEEESSS
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECC---E---ECCCHHHHHHHHHcCCCCCEEEEEEEECC
Confidence 688999999999999 8 999999999763 2 223445667777755 346899998853
No 383
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=96.58 E-value=0.0048 Score=56.69 Aligned_cols=70 Identities=20% Similarity=0.329 Sum_probs=52.2
Q ss_pred ceeEEeee-CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc-cCC-ceEEEEeeccCC
Q 022783 95 YGLKFAKG-RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-RVG-PLLMKMQKRYGK 171 (292)
Q Consensus 95 lGl~~~~~-~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~-r~g-~v~l~l~r~~~~ 171 (292)
|||.+... ...+++|..|.+++.|+++| |++||+|+++.. . +...+......|.. ++| ++.|++.|.-|+
T Consensus 231 lGi~~~~~~~~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing---~---~v~~~~~l~~~l~~~~~g~~v~l~v~R~~g~ 303 (324)
T 1y8t_A 231 LGVQVTNDKDTLGAKIVEVVAGGAAANAG-VPKGVVVTKVDD---R---PINSADALVAAVRSKAPGATVALTFQDPSGG 303 (324)
T ss_dssp CCEEEESCSSSSSEEEEEECTTSTTTTTT-CCTTCEEEEETT---E---ECCSHHHHHHHHHTSCTTCEEEEEEECSSCC
T ss_pred cceEeeeccCCCceEEEEECCCChHHHcC-CCCCCEEEEECC---E---ECCCHHHHHHHHHhcCCCCEEEEEEEECCCC
Confidence 78888764 35689999999999999999 999999999763 2 33344556666764 344 589999884444
No 384
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=96.52 E-value=0.0028 Score=48.69 Aligned_cols=57 Identities=9% Similarity=0.155 Sum_probs=43.4
Q ss_pred eEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccC--CceEEEEeeccC
Q 022783 107 TYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV--GPLLMKMQKRYG 170 (292)
Q Consensus 107 v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~--g~v~l~l~r~~~ 170 (292)
.+|.+|.+++-|+++| |++||+|+++.. . +...+..+..+|.... .++.|.+.|.-+
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing---~---~v~~~~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDG---I---ETPDWDAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETT---E---ECSSHHHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECC---E---ECCCHHHHHHHHHHhcCCCcEEEEEEECCC
Confidence 4689999999999999 999999999863 2 3344555666676543 478999999764
No 385
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.42 E-value=0.012 Score=65.61 Aligned_cols=59 Identities=10% Similarity=-0.005 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
.-+++.|.++.+.|+|++||++|.+| -+| ..|++++-|+.++|++++|++.|..|++..
T Consensus 1106 ~vWsqLAKAql~~G~~kEAIdsYiKA--dD~------say~eVa~~~~~lGkyEEAIeyL~mArk~~ 1164 (1630)
T 1xi4_A 1106 AVWSQLAKAQLQKGMVKEAIDSYIKA--DDP------SSYMEVVQAANTSGNWEELVKYLQMARKKA 1164 (1630)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHhc--CCh------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhc
Confidence 44569999999999999999999997 222 469999999999999999999999998765
No 386
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=96.39 E-value=0.0062 Score=57.70 Aligned_cols=71 Identities=15% Similarity=0.233 Sum_probs=50.2
Q ss_pred ceeEEeee--CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCC-ceEEEEeeccC
Q 022783 95 YGLKFAKG--RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVG-PLLMKMQKRYG 170 (292)
Q Consensus 95 lGl~~~~~--~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g-~v~l~l~r~~~ 170 (292)
+|+.|... .+++++|..|.+++.|+++| |++||+|+++-.. .+-. .....+...|+...| +|.|++.|.-.
T Consensus 87 iG~~~~~~~~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~---~v~~-~~~~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 87 VGLEITYDGGSGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGT---AVKG-MSLYDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp CSEEEEECTTCSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTE---ECTT-CCHHHHHHHHCBSTTCEEEEEEEETTE
T ss_pred EEEEEEEeecCCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCE---ECCC-CCHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 67777654 36799999999999999999 9999999998642 1111 112345566765544 47888887644
No 387
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.33 E-value=0.012 Score=49.41 Aligned_cols=72 Identities=7% Similarity=0.067 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccChhh
Q 022783 215 REQDLREGLQLYRTG---KYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDFKV 288 (292)
Q Consensus 215 ~~~~~n~G~~L~k~g---dYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df~~ 288 (292)
...-|+.|..|.+.. +..++|..++..+..+|. .....+|.+|..|.++|+|++|+..++..++.-+++-+.
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~--~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA 114 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAES--RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQV 114 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGG--GHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcc--hhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHH
Confidence 456688888887764 456899999999988775 346679999999999999999999999999998776543
No 388
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.31 E-value=0.0073 Score=52.41 Aligned_cols=61 Identities=23% Similarity=0.357 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHcCC---CCc-------------------cchhHHHHHHHHHHHhcCCHHHHHHH
Q 022783 217 QDLREGLQLYRTGKYEVAREKFESVLGSK---PTP-------------------EESSVASYNVACCYSKLNQVKAGLSA 274 (292)
Q Consensus 217 ~~~n~G~~L~k~gdYeeAIe~fekALeld---P~~-------------------~d~a~a~YN~AccyakLgq~eeALe~ 274 (292)
..+..|..+|..++|..|+..|.+||.+. ++. .....+-|-+|.||.+++++++||..
T Consensus 65 ~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~ 144 (167)
T 3ffl_A 65 LLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAI 144 (167)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHH
Confidence 34699999999999999999999998421 110 00124689999999999999999999
Q ss_pred HHH
Q 022783 275 LED 277 (292)
Q Consensus 275 Lek 277 (292)
|+.
T Consensus 145 Le~ 147 (167)
T 3ffl_A 145 LDG 147 (167)
T ss_dssp HHT
T ss_pred Hhc
Confidence 874
No 389
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=96.26 E-value=0.019 Score=43.61 Aligned_cols=72 Identities=10% Similarity=-0.001 Sum_probs=47.6
Q ss_pred HHhhccccchhhHHHHHHHhhHHHHH--h-hHhHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHH
Q 022783 185 RAERNSGVISNRVREIQMQNYMKKKE--Q-KERREQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVA 259 (292)
Q Consensus 185 ~a~rN~GvI~~~l~eiqea~Y~kkk~--l-k~~~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~A 259 (292)
+..++.|+...+..-++++.-..... . .....-..++|..++++|++++|+..|+++|.++|++ ..+.+|++
T Consensus 13 ~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~---~~~~~n~~ 87 (104)
T 2v5f_A 13 KVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEH---QRANGNLK 87 (104)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHH
T ss_pred HHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC---HHHHhhHH
Confidence 45566666666555555542111100 0 0112234599999999999999999999999999984 34588887
No 390
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=96.26 E-value=0.0032 Score=47.05 Aligned_cols=56 Identities=16% Similarity=0.433 Sum_probs=42.3
Q ss_pred eEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccC-CceEEEEeecc
Q 022783 107 TYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV-GPLLMKMQKRY 169 (292)
Q Consensus 107 v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~-g~v~l~l~r~~ 169 (292)
++|..|.+++.|+++| +++||+|+++.. .+...+.++..++.... .++.|++.|.-
T Consensus 6 ~~V~~v~~~spA~~aG-l~~GD~I~~ing------~~v~~~~~~~~~l~~~~g~~v~l~v~R~g 62 (91)
T 2zpm_A 6 PVLENVQPNSAASXAG-LQAGDRIVXVDG------QPLTQWVTFVMLVRDNPGXSLALEIERQG 62 (91)
T ss_dssp CBCSEECTTSHHHHTT-CCTTCEEEEETT------EECCCHHHHHHHHHHCTTCCEEEEEEETT
T ss_pred eEEEEECCCChHHhcC-CCCCCEEEEECC------eEcCCHHHHHHHHhcCCCCeEEEEEEECC
Confidence 5788999999999999 999999999863 23344556666676554 47889998853
No 391
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.22 E-value=0.034 Score=47.18 Aligned_cols=73 Identities=5% Similarity=0.050 Sum_probs=60.7
Q ss_pred HhHHHHHHHHHHHHHcCC---HHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccChh
Q 022783 213 ERREQDLREGLQLYRTGK---YEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 213 ~~~~~~~n~G~~L~k~gd---YeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df~ 287 (292)
......|+.|..|.+..+ -.++|..++..+..+|. .....+|.+|..|+++|+|++|+..|+..|+.-+++-+
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~--~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~Q 112 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAES--RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQ 112 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCS--THHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcc--chhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHH
Confidence 344567899999977654 45799999999988785 34567999999999999999999999999999887644
No 392
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=96.21 E-value=0.023 Score=45.97 Aligned_cols=78 Identities=12% Similarity=0.078 Sum_probs=54.0
Q ss_pred ceEEEEecC---CceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhcc--CC
Q 022783 85 EEYEVEIEQ---PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR--VG 159 (292)
Q Consensus 85 ~~~~v~l~K---PlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r--~g 159 (292)
+.++|+|.| .+|+.+..+.. +.+|..|.+. +..+| |++||+|+.+.. +-.......++..+|+.. ..
T Consensus 12 ~~~~V~L~Kg~~G~GFsI~~~~~-g~~V~~I~~~--~~~aG-L~~GD~Il~VNG----~~v~~~~h~evv~~lk~~~~G~ 83 (113)
T 3soe_A 12 LLVTIPLIKGPKGFGFAIADSPT-GQKVKMILDS--QWCQG-LQKGDIIKEIYH----QNVQNLTHLQVVEVLKQFPVGA 83 (113)
T ss_dssp EEEEEEEECBTTBSSEEEEEETT-EEEEEEESCG--GGSTT-CCTTCEEEEETT----EECTTSCHHHHHHHHHHSCTTC
T ss_pred CEEEEEEEECCCcccEEEeCCCC-CcEEEEecCh--HHhCC-CCCCCEEEEECC----EECCCCCHHHHHHHHHcCCCCC
Confidence 557888875 68888865443 5679899883 55566 999999999862 222222345677888864 34
Q ss_pred ceEEEEeeccC
Q 022783 160 PLLMKMQKRYG 170 (292)
Q Consensus 160 ~v~l~l~r~~~ 170 (292)
+|.|++.|.-.
T Consensus 84 ~v~L~V~R~g~ 94 (113)
T 3soe_A 84 DVPLLILRGGP 94 (113)
T ss_dssp EEEEEEEESSC
T ss_pred EEEEEEEECCc
Confidence 78999999543
No 393
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.20 E-value=0.025 Score=42.97 Aligned_cols=52 Identities=6% Similarity=-0.057 Sum_probs=40.1
Q ss_pred HHhhHHHHHhhHhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhH
Q 022783 202 MQNYMKKKEQKERR-EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSV 253 (292)
Q Consensus 202 ea~Y~kkk~lk~~~-~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~ 253 (292)
...+.+...+.++. ...+.+|+.+++.|+|++||..|+++|+.+|.......
T Consensus 29 ~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~~~~ 81 (93)
T 3bee_A 29 SLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLDRVT 81 (93)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCCHHH
T ss_pred HHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHH
Confidence 34566666666665 44569999999999999999999999999998434433
No 394
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=96.17 E-value=0.0099 Score=54.97 Aligned_cols=58 Identities=19% Similarity=0.365 Sum_probs=45.5
Q ss_pred CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEeecc
Q 022783 104 DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRY 169 (292)
Q Consensus 104 ~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r~~ 169 (292)
..|++|.+|.+++.|+++| |++||+|+++.. ..+ ..+.+...+|+. ..++.|++.|.-
T Consensus 255 ~~gv~V~~V~~~spA~~aG-l~~GDvI~~ing---~~v---~~~~~l~~~l~~-~~~v~l~v~R~g 312 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGE---QMV---QNAEDVYEAVRT-QSQLAVQIRRGR 312 (325)
T ss_dssp SSCEEEEEECTTSHHHHHT-CCTTCEEEEETT---EEC---CSHHHHHHHHTT-CSSEEEEEEETT
T ss_pred CCCeEEEEeCcCChHHHCC-CCCCCEEEEECC---EEc---CCHHHHHHHHhC-CCeEEEEEEECC
Confidence 3589999999999999999 999999999763 333 344555666765 478999998853
No 395
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=96.16 E-value=0.0052 Score=57.71 Aligned_cols=69 Identities=17% Similarity=0.372 Sum_probs=51.4
Q ss_pred ceeEEeee-----------CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhcc-CC-ce
Q 022783 95 YGLKFAKG-----------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR-VG-PL 161 (292)
Q Consensus 95 lGl~~~~~-----------~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r-~g-~v 161 (292)
||+.+..- ...|++|.+|.+++.|+++| |++||+|+++-. . +.....+....|+.. +| .|
T Consensus 242 lGv~~~~~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aG-L~~GDvI~~ing---~---~v~~~~~l~~~l~~~~~g~~v 314 (345)
T 3stj_A 242 LGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAG-VKAGDIITSLNG---K---PLNSFAELRSRIATTEPGTKV 314 (345)
T ss_dssp CCEEEEECCHHHHHHTTCSCCSSEEEEEECTTSHHHHHT-CCTTCEECEETT---E---ECSCHHHHHHHHHTSCTTCEE
T ss_pred cceeeEeecHHHHHhcCCCCCceEEEEEeccCChHHHcC-CCCCCEEEEECC---E---ECCCHHHHHHHHHhcCCCCEE
Confidence 67777542 23589999999999999999 999999999763 1 344556667777653 44 67
Q ss_pred EEEEeeccC
Q 022783 162 LMKMQKRYG 170 (292)
Q Consensus 162 ~l~l~r~~~ 170 (292)
.|++.|.--
T Consensus 315 ~l~v~R~g~ 323 (345)
T 3stj_A 315 KLGLLRNGK 323 (345)
T ss_dssp EEEEEETTE
T ss_pred EEEEEECCE
Confidence 899988543
No 396
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=96.09 E-value=0.0088 Score=46.40 Aligned_cols=56 Identities=13% Similarity=0.168 Sum_probs=38.6
Q ss_pred CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc-c-CCceEEEEeec
Q 022783 106 GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-R-VGPLLMKMQKR 168 (292)
Q Consensus 106 ~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~-r-~g~v~l~l~r~ 168 (292)
|+.|..+.|++.|+++| |++||+|+.+- |..+- ++.....++.. + ..++.|.+.|.
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~in---g~~v~---~~~d~~~~~~~~~~g~~v~l~v~R~ 95 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALN---GLDLT---DPNVMNTLFQSMNEMTEMSLTVERD 95 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEET---TEETT---STTHHHHHHHHHTTCSEEEEEEEET
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEEC---CEECC---CHHHHHHHHHhcCCCCeEEEEEEEC
Confidence 56677777777779999 99999999986 33333 33334444542 3 45789999884
No 397
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=95.98 E-value=0.009 Score=57.67 Aligned_cols=59 Identities=14% Similarity=0.239 Sum_probs=49.7
Q ss_pred CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEeeccC
Q 022783 105 GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRYG 170 (292)
Q Consensus 105 G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r~~~ 170 (292)
.+++|.+|.+++.|+++| |++||+|+.+.. .+...+.+...+|+...+++.|+++|.-.
T Consensus 363 ~gv~V~~V~~~spA~~aG-L~~GD~I~~vng------~~v~~~~~~~~~l~~~~~~v~l~v~R~g~ 421 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAG-LQKDDVIIGVNR------DRVNSIAEMRKVLAAKPAIIALQIVRGNE 421 (436)
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCEEEEECC------EECCCHHHHHHHHHhCCCeEEEEEEECCE
Confidence 489999999999999999 999999999863 24456677778888888899999999643
No 398
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=95.93 E-value=0.033 Score=52.31 Aligned_cols=88 Identities=15% Similarity=-0.031 Sum_probs=68.4
Q ss_pred hhHHHHHHH--hhHHHHHhhHhHHH---HHHHHHHHHHc-----CCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHh
Q 022783 195 NRVREIQMQ--NYMKKKEQKERREQ---DLREGLQLYRT-----GKYEVAREKFESVLGSKPTPEESSVASYNVACCYSK 264 (292)
Q Consensus 195 ~~l~eiqea--~Y~kkk~lk~~~~~---~~n~G~~L~k~-----gdYeeAIe~fekALeldP~~~d~a~a~YN~Accyak 264 (292)
..+.....+ ...++.++.++..+ +.-+|..|++. |+.++|..+|++||+++|+. ....+|..|-.++.
T Consensus 174 ~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~--~id~~v~YA~~l~~ 251 (301)
T 3u64_A 174 ALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAH--DPDHHITYADALCI 251 (301)
T ss_dssp CCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTT--CSHHHHHHHHHTTT
T ss_pred HHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCC--CchHHHHHHHHHHH
Confidence 344555443 66677777776422 35889998884 99999999999999999962 13458888999988
Q ss_pred -cCCHHHHHHHHHHHHHhCcc
Q 022783 265 -LNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 265 -Lgq~eeALe~LekAIelG~~ 284 (292)
+|++++|...|++|+.+..+
T Consensus 252 ~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 252 PLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp TTTCHHHHHHHHHHHHHCCGG
T ss_pred hcCCHHHHHHHHHHHHcCCCC
Confidence 49999999999999998755
No 399
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=95.67 E-value=0.024 Score=45.90 Aligned_cols=57 Identities=18% Similarity=0.315 Sum_probs=41.2
Q ss_pred eCCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc-cC-CceEEEEee
Q 022783 102 GRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-RV-GPLLMKMQK 167 (292)
Q Consensus 102 ~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~-r~-g~v~l~l~r 167 (292)
...+++.|..|.+++.|+++ |++||+|+++-. . +...+.+...++.. +. .++.|++ |
T Consensus 22 ~~~~gv~V~~V~~~spA~~a--L~~GD~Il~InG---~---~v~~~~dl~~~l~~~~~g~~v~l~V-R 80 (125)
T 2hga_A 22 HQPDGVQIDSVVPGSPASKV--LTPGLVIESING---M---PTSNLTTYSAALKTISVGEVINITT-D 80 (125)
T ss_dssp -CCCCEEEEEECSSSGGGGT--SCTTCEEEEETT---E---ECSSHHHHHHHHTTCCTTCEEEEEE-T
T ss_pred CCCCceEEEEECCCChHHHh--cCCCCEEEEECC---E---EcCCHHHHHHHHHhcCCCCEEEEEE-E
Confidence 35678999999999999988 999999999863 2 33344455556663 43 4678888 5
No 400
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=95.64 E-value=0.014 Score=54.55 Aligned_cols=69 Identities=25% Similarity=0.428 Sum_probs=50.7
Q ss_pred ceeEEeeeCC------CCeEEEEeCCCCCcccccCccc-----------CCEEEEeccccCcccccccchhhHHHHhhc-
Q 022783 95 YGLKFAKGRD------GGTYIDAIAPGGSADKTGMFQV-----------GDKVLATSAVFGTEIWPAAEYGRTMYTIRQ- 156 (292)
Q Consensus 95 lGl~~~~~~~------G~v~V~~v~~ggnA~k~g~i~v-----------GD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~- 156 (292)
|||.+..... .|++|.+|.+++.|+++| |++ ||+|+++-. . +...+.+.+.+|..
T Consensus 235 lGi~~~~~~~~~~~~~~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing---~---~v~~~~dl~~~l~~~ 307 (348)
T 3qo6_A 235 LGIKFAPDQSVEQLGVSGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNG---T---KVSNGSDLYRILDQC 307 (348)
T ss_dssp CCCEECCTTTTTTTTCSSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETT---B---CCSSSHHHHHHHTTC
T ss_pred cCcEEccchhhhhcCCceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECC---E---EeCCHHHHHHHHHhC
Confidence 7887754321 489999999999999999 888 999999753 2 33445566777754
Q ss_pred cCC-ceEEEEeeccC
Q 022783 157 RVG-PLLMKMQKRYG 170 (292)
Q Consensus 157 r~g-~v~l~l~r~~~ 170 (292)
++| .|.|++.|.--
T Consensus 308 ~~g~~v~l~v~R~g~ 322 (348)
T 3qo6_A 308 KVGDEVTVEVLRGDH 322 (348)
T ss_dssp CTTCEEEEEEECSSS
T ss_pred CCcCEEEEEEEECCE
Confidence 444 67999988543
No 401
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=95.51 E-value=0.0095 Score=58.67 Aligned_cols=50 Identities=18% Similarity=0.229 Sum_probs=24.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDA 278 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekA 278 (292)
+.+.|..+++.|+|++|+..|+++ + .|.++|-|+.++|++++|++++.+|
T Consensus 125 ~~~IGd~~~~~g~yeeA~~~Y~~a----~-------n~~~LA~~L~~Lg~yq~AVea~~KA 174 (449)
T 1b89_A 125 IQQVGDRCYDEKMYDAAKLLYNNV----S-------NFGRLASTLVHLGEYQAAVDGARKA 174 (449)
T ss_dssp ------------CTTTHHHHHHHT----T-------CHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHh----h-------hHHHHHHHHHHhccHHHHHHHHHHc
Confidence 346666666666666666666655 2 1666666666666666666666666
No 402
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=95.37 E-value=0.016 Score=56.31 Aligned_cols=57 Identities=12% Similarity=0.241 Sum_probs=48.0
Q ss_pred CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEeec
Q 022783 105 GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKR 168 (292)
Q Consensus 105 G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r~ 168 (292)
+|++|.+|.+++.|+++| |++||+|+.+.. .+..++.+...+|+....++.|.+.|.
T Consensus 386 ~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng------~~v~~~~~~~~~l~~~~~~v~l~v~R~ 442 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAG-IRPGDIIISANK------KPVTDVKSLQTIAQEKKKELLVQVLRG 442 (451)
T ss_dssp EEEEEEEECTTSHHHHHT-CCTTCEEEEETT------EECCSHHHHHHHTTSSCSCEEEEEEET
T ss_pred CceEEEEECCCCHHHHcC-CCCCCEEEEECC------EECCCHHHHHHHHhcCCCeEEEEEEEC
Confidence 489999999999999999 999999999863 345566677788887777899999885
No 403
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=95.21 E-value=0.022 Score=49.32 Aligned_cols=58 Identities=9% Similarity=0.138 Sum_probs=39.0
Q ss_pred CCeEEEEeCCCCCcccccCcccC-CEEEEeccccCcccccccchhhHHHHhhcc-CCceEEEEeec
Q 022783 105 GGTYIDAIAPGGSADKTGMFQVG-DKVLATSAVFGTEIWPAAEYGRTMYTIRQR-VGPLLMKMQKR 168 (292)
Q Consensus 105 G~v~V~~v~~ggnA~k~g~i~vG-D~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r-~g~v~l~l~r~ 168 (292)
.|++|..|.|++-|+++| |++| |+|+++... .+-...++ ....++.. ..++.|++.|.
T Consensus 16 ~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~---~v~~~~~~--~~~~~~~~~g~~v~l~v~R~ 75 (209)
T 3rle_A 16 EGYHVLRVQENSPGHRAG-LEPFFDFIVSINGS---RLNKDNDT--LKDLLKANVEKPVKMLIYSS 75 (209)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTTEEEEEETTE---ECCSSSSH--HHHHHHHTTTSCEEEEEEET
T ss_pred CEEEEEEECCCCHHHHCC-CCcCCeEEEEECCE---ECcCHHHH--HHHHHhcCCCCEEEEEEEec
Confidence 389999999999999999 9999 999997642 22111122 11223333 35678888774
No 404
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=95.17 E-value=0.02 Score=47.43 Aligned_cols=45 Identities=20% Similarity=0.347 Sum_probs=36.7
Q ss_pred ceEEEEec----CCceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEecc
Q 022783 85 EEYEVEIE----QPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSA 135 (292)
Q Consensus 85 ~~~~v~l~----KPlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa 135 (292)
.+.+++|. ..||+.+. +| +|..|.+++.|+++| +++||+|+.+..
T Consensus 88 ~~~~v~l~~~~~~~lG~~~~---~g--~v~~v~~~s~a~~aG-l~~GD~I~~ing 136 (166)
T 1w9e_A 88 FERTITMHKDSTGHVGFIFK---NG--KITSIVKDSSAARNG-LLTEHNICEING 136 (166)
T ss_dssp TCEEEEEECCTTSCCSEEEE---TT--EEEEECTTSHHHHTT-CCSSEEEEEETT
T ss_pred CcEEEEEecCCCCcEeEEEe---CC--EEEEEccCCHHHHcC-CCCCCEEEEECC
Confidence 34667776 45888776 34 899999999999999 999999999764
No 405
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=95.16 E-value=0.033 Score=53.79 Aligned_cols=56 Identities=18% Similarity=0.251 Sum_probs=40.1
Q ss_pred CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEeecc
Q 022783 106 GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRY 169 (292)
Q Consensus 106 ~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r~~ 169 (292)
.++|..|.|++.|+++| |++||+|+++-.. .+-.. . +...|+....+|.|++.|.-
T Consensus 91 ~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~---~v~~~-~---~~~~l~~~g~~v~l~v~R~g 146 (403)
T 3k50_A 91 NALISYVVPGSPAEEAG-LQRGHWIMMMNGD---YITKK-V---ESELLQGSTRQLQIGVYKEV 146 (403)
T ss_dssp EEEEEEECTTSHHHHTT-CCTTCEEEEETTB---CBCTT-T---GGGGTSCSCEEEEEEEEEEE
T ss_pred eEEEEEeCCCChHHHcC-CCCCCEEEEECCE---Eccch-h---HHHHhhCCCCEEEEEEEeCC
Confidence 48899999999999999 9999999998742 22111 1 33456553446788887753
No 406
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=95.09 E-value=0.032 Score=54.28 Aligned_cols=70 Identities=19% Similarity=0.321 Sum_probs=51.3
Q ss_pred ceeEEeee-----------CC-CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc-cC-Cc
Q 022783 95 YGLKFAKG-----------RD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-RV-GP 160 (292)
Q Consensus 95 lGl~~~~~-----------~~-G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~-r~-g~ 160 (292)
||+.+..- .. .|++|..|.|++.|+++| |++||+|+++-. . +.........+|.. ++ ..
T Consensus 260 lGv~~~~~~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG---~---~v~~~~~l~~~l~~~~~g~~ 332 (451)
T 3pv2_A 260 MGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAG-LKAGDIITQIND---T---KITQATQVKTTISLLRVGST 332 (451)
T ss_dssp CCEEEEECCHHHHHHTTSCTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETT---E---ECCSHHHHHHHHHTSCTTCE
T ss_pred ccceEEeccHHHHHhcCCCcCCceEEEEecCCCChHHHcC-CCCCCEEEEECC---E---EcCCHHHHHHHHHhcCCCCE
Confidence 78877642 12 689999999999999999 999999999763 2 33445556666664 33 46
Q ss_pred eEEEEeeccCC
Q 022783 161 LLMKMQKRYGK 171 (292)
Q Consensus 161 v~l~l~r~~~~ 171 (292)
+.|++.|.-..
T Consensus 333 v~l~V~R~g~~ 343 (451)
T 3pv2_A 333 VKIIVERDNKP 343 (451)
T ss_dssp EEEEEEETTEE
T ss_pred EEEEEEECCEE
Confidence 78999885433
No 407
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=94.88 E-value=0.028 Score=55.33 Aligned_cols=65 Identities=18% Similarity=0.141 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCc-cchhHHHH-----------------------HHHHHHHhcCCHHHH
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTP-EESSVASY-----------------------NVACCYSKLNQVKAG 271 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~-~d~a~a~Y-----------------------N~AccyakLgq~eeA 271 (292)
..+..+|..|+++|+|++|++.|.+|. +|.. .....++. .+..+|.+.|++++|
T Consensus 149 ~n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEa 226 (449)
T 1b89_A 149 SNFGRLASTLVHLGEYQAAVDGARKAN--STRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEEL 226 (449)
T ss_dssp TCHHHHHHHHHTTTCHHHHHHHHHHHT--CHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred hhHHHHHHHHHHhccHHHHHHHHHHcC--CchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHH
Confidence 345689999999999999999999993 4410 00001111 122468889999999
Q ss_pred HHHHHHHHHhC
Q 022783 272 LSALEDALLAG 282 (292)
Q Consensus 272 Le~LekAIelG 282 (292)
+..|++|+.+-
T Consensus 227 i~lLe~aL~le 237 (449)
T 1b89_A 227 ITMLEAALGLE 237 (449)
T ss_dssp HHHHHHHTTST
T ss_pred HHHHHHHhCCc
Confidence 99999998664
No 408
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=94.72 E-value=0.033 Score=47.32 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccc
Q 022783 215 REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEE 250 (292)
Q Consensus 215 ~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d 250 (292)
++-.+++|+.+++.|+|++|+.+++++|+++|++..
T Consensus 71 rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~Q 106 (152)
T 1pc2_A 71 RDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQ 106 (152)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHH
Confidence 444579999999999999999999999999998643
No 409
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=94.70 E-value=0.042 Score=52.99 Aligned_cols=59 Identities=15% Similarity=0.360 Sum_probs=44.1
Q ss_pred CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc-c-CCceEEEEeeccC
Q 022783 105 GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-R-VGPLLMKMQKRYG 170 (292)
Q Consensus 105 G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~-r-~g~v~l~l~r~~~ 170 (292)
.|++|.+|.+++.|+++| |++||+|+++.. . +...+.....++.. . ...+.|++.|.--
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG---~---~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~ 323 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNG---K---PLNSFAELRSRIATTEPGTKVKLGLLRNGK 323 (436)
T ss_pred cceEEEEECCCChHHHCC-CCCCCEEEEECC---E---ECCCHHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 589999999999999999 999999999763 2 33344555566653 2 3467888888543
No 410
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=94.55 E-value=0.0063 Score=59.19 Aligned_cols=67 Identities=15% Similarity=0.347 Sum_probs=0.0
Q ss_pred ceeEEeee-CCCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEeec
Q 022783 95 YGLKFAKG-RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKR 168 (292)
Q Consensus 95 lGl~~~~~-~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r~ 168 (292)
+|+.+..- ...+++|.+|.+++.|+++| |++||+|+.+-. ++...+.+...+|+...+++.|.+.|.
T Consensus 372 ~G~~l~~~~~~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng------~~v~~~~~l~~~l~~~~~~v~l~v~R~ 439 (448)
T 1ky9_A 372 EGAEMSNKGKDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQ------QAVKNIAELRKVLDSKPSVLALNIQRG 439 (448)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred cceEeeccCCCCeEEEEEecCCCHHHHcC-CCCCCEEEEECC------EECCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 36666431 34589999999999999999 999999998763 233445555667777777888888885
No 411
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=94.39 E-value=0.12 Score=49.65 Aligned_cols=71 Identities=10% Similarity=0.016 Sum_probs=49.3
Q ss_pred HhHHHHHHHHHHHHHc---CCHHHHHHHHHHHHcCCCCccch--------------------------------------
Q 022783 213 ERREQDLREGLQLYRT---GKYEVAREKFESVLGSKPTPEES-------------------------------------- 251 (292)
Q Consensus 213 ~~~~~~~n~G~~L~k~---gdYeeAIe~fekALeldP~~~d~-------------------------------------- 251 (292)
..+++.+-+|..+... .++.+|+.+|++||+++|++...
T Consensus 194 ~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~ 273 (372)
T 3ly7_A 194 GALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPEL 273 (372)
T ss_dssp GGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGG
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccC
Confidence 3457777777777654 34578999999999999975211
Q ss_pred ---hHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 252 ---SVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 252 ---a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
+.+|-=.|.++...|++++|+..+++|+.++.
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~ 308 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEM 308 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC
Confidence 01111134455568999999999999999984
No 412
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=94.33 E-value=0.0075 Score=55.79 Aligned_cols=57 Identities=18% Similarity=0.332 Sum_probs=0.0
Q ss_pred CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEeec
Q 022783 104 DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKR 168 (292)
Q Consensus 104 ~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r~ 168 (292)
..|++|.+|.+++.|+++| |++||+|+++-. ..+ ..+.++..+|+. ..+|.|++.|.
T Consensus 253 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing---~~v---~~~~~~~~~l~~-~~~v~l~v~R~ 309 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGG-LKENDVIISING---QSV---VSANDVSDVIKR-ESTLNMVVRRG 309 (332)
T ss_dssp -----------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcC-CCCCCEEEEECC---EEC---CCHHHHHHHHhC-CCeEEEEEEEC
Confidence 3589999999999999999 999999999753 222 334444455553 45688888884
No 413
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.29 E-value=0.12 Score=57.72 Aligned_cols=79 Identities=15% Similarity=0.042 Sum_probs=48.1
Q ss_pred hhHHHHHhhHhHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCc----------------------cchhHHHHHHHHH
Q 022783 204 NYMKKKEQKERREQDLREGLQLYRTGKYEVAREKFESVLGSKPTP----------------------EESSVASYNVACC 261 (292)
Q Consensus 204 ~Y~kkk~lk~~~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~----------------------~d~a~a~YN~Acc 261 (292)
.|..+++.-.+...+..+|..|.++|+|++|++++.+|...++=. ...+.-+..+..+
T Consensus 1210 ~YeeA~~~Y~kA~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~y 1289 (1630)
T 1xi4_A 1210 MYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINY 1289 (1630)
T ss_pred CHHHHHHHHHhhhHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHH
Confidence 444444444444556677777777788888888887774433200 0001124455667
Q ss_pred HHhcCCHHHHHHHHHHHHHhC
Q 022783 262 YSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 262 yakLgq~eeALe~LekAIelG 282 (292)
|..+|.+++||..|++||.+.
T Consensus 1290 Ye~~G~feEAI~LlE~aL~Le 1310 (1630)
T 1xi4_A 1290 YQDRGYFEELITMLEAALGLE 1310 (1630)
T ss_pred HHHcCCHHHHHHHHHHHhccC
Confidence 777888888888888877654
No 414
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=94.09 E-value=0.22 Score=46.55 Aligned_cols=67 Identities=7% Similarity=-0.124 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
...+-.|.++...|++++|+..+.++|+.+|+. +...++.-.+-+|.++|+.+.|.+.+++..+.-.
T Consensus 101 ~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~-~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~ 167 (310)
T 3mv2_B 101 YELYLLATAQAILGDLDKSLETCVEGIDNDEAE-GTTELLLLAIEVALLNNNVSTASTIFDNYTNAIE 167 (310)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCST-THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCc-CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc
Confidence 345689999999999999999999999998832 3345688889999999999999999999877743
No 415
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=93.55 E-value=0.11 Score=48.90 Aligned_cols=53 Identities=11% Similarity=0.016 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHhCcc
Q 022783 231 YEVAREKFESVLGSKPTPEESSVASYNVACCYSKL-----NQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 231 YeeAIe~fekALeldP~~~d~a~a~YN~AccyakL-----gq~eeALe~LekAIelG~~ 284 (292)
..+|...+++||+++|+. ..+.+|.-++..|... |+.++|..++++||++...
T Consensus 179 l~~A~a~lerAleLDP~~-~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~ 236 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSY-QEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSA 236 (301)
T ss_dssp HHHHHHHHHHHHHHCTTH-HHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHhCCCc-ccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCC
Confidence 578999999999999984 2356899999999996 9999999999999999875
No 416
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=93.31 E-value=0.12 Score=53.56 Aligned_cols=69 Identities=9% Similarity=0.124 Sum_probs=50.3
Q ss_pred CceeEEeeeCCCCeEEEEeCCC--------CCcccccC-cccCCEEEEeccccCcccccccchhhHHHHhhccCC-ceEE
Q 022783 94 PYGLKFAKGRDGGTYIDAIAPG--------GSADKTGM-FQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVG-PLLM 163 (292)
Q Consensus 94 PlGl~~~~~~~G~v~V~~v~~g--------gnA~k~g~-i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g-~v~l 163 (292)
-+|+.|.. .+|+++|..|.+| +.|+++|. |+ ||+|+++-.. .+ .....+...|+...| .|.|
T Consensus 738 g~G~~~~~-~~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~---~~---~~~~~~~~~~~~~~g~~v~l 809 (1045)
T 1k32_A 738 RIACDFKL-DGDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGE---TV---GAGSNIYRVLSEKAGTSARI 809 (1045)
T ss_dssp BCSEEEEE-ETTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTE---EC---BTTBCHHHHHHTTTTSEEEE
T ss_pred eecEEEEE-eCCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCE---Ec---cchhhHHHhhcCCCCCEEEE
Confidence 46788876 4688999999998 99999994 89 9999998642 22 222245567776655 6799
Q ss_pred EEeeccC
Q 022783 164 KMQKRYG 170 (292)
Q Consensus 164 ~l~r~~~ 170 (292)
++.|.-+
T Consensus 810 ~v~r~~~ 816 (1045)
T 1k32_A 810 RLSGKGG 816 (1045)
T ss_dssp EEECSSS
T ss_pred EEECCCC
Confidence 9988653
No 417
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=93.31 E-value=0.13 Score=53.61 Aligned_cols=54 Identities=22% Similarity=0.202 Sum_probs=47.3
Q ss_pred HHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 022783 222 GLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDA 278 (292)
Q Consensus 222 G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekA 278 (292)
+.-|...|+|+-|+++-.+|...-|. + -..||++|-||.++|+|+.||-.|+-+
T Consensus 344 a~FLl~K~~~elAL~~Ak~AV~~aPs--e-F~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 344 TNFLLNRGDYELALGVSNTSTELALD--S-FESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSS--C-HHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHhccCcHHHHHHHHHHHHhcCch--h-hHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 33346789999999999999999997 3 457999999999999999999998876
No 418
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=92.33 E-value=0.025 Score=53.93 Aligned_cols=55 Identities=22% Similarity=0.425 Sum_probs=0.0
Q ss_pred EEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEee
Q 022783 108 YIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQK 167 (292)
Q Consensus 108 ~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r 167 (292)
+|..|.+||.|+++| +++||+|+++... .+ .......+..+|+...+.+.|++..
T Consensus 318 ~I~~V~~gs~A~~aG-L~~GD~Il~VNg~---~v-~~~s~~~~~~~l~~~~~~v~L~V~p 372 (388)
T 3suz_A 318 IICSLMRGGIAERGG-VRVGHRIIEINGQ---SV-VATAHEKIVQALSNSVGEIHMKTMP 372 (388)
T ss_dssp ------------------------------------------------------------
T ss_pred EEEEeecCCHHHHcC-CCCCCEEEEECCE---EC-CCCCHHHHHHHHHhCCCeEEEEEEe
Confidence 899999999999999 9999999997632 22 1112245566777777778777643
No 419
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=91.95 E-value=0.22 Score=41.11 Aligned_cols=38 Identities=21% Similarity=0.344 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccch
Q 022783 214 RREQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEES 251 (292)
Q Consensus 214 ~~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~ 251 (292)
+++-.+.+|+.+|+.|+|++|+..++..|+++|++...
T Consensus 73 ~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA 110 (126)
T 1nzn_A 73 QRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQA 110 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHH
Confidence 34445799999999999999999999999999986443
No 420
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=91.93 E-value=0.6 Score=43.52 Aligned_cols=58 Identities=12% Similarity=0.032 Sum_probs=44.6
Q ss_pred HHHHH--HHHcC--CHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 220 REGLQ--LYRTG--KYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 220 n~G~~--L~k~g--dYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
+++.. ....| +|++|+..|+++++..|+. ....+++| |+..+|++++|...|++.+++
T Consensus 179 ~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~-~~~~lLln---~~~~~g~~~eAe~~L~~l~~~ 240 (310)
T 3mv2_B 179 NLAESYIKFATNKETATSNFYYYEELSQTFPTW-KTQLGLLN---LHLQQRNIAEAQGIVELLLSD 240 (310)
T ss_dssp HHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSH-HHHHHHHH---HHHHHTCHHHHHHHHHHHHSH
T ss_pred HHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCc-ccHHHHHH---HHHHcCCHHHHHHHHHHHHHh
Confidence 55444 44444 9999999999998888852 12456788 899999999999999976665
No 421
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=91.82 E-value=0.33 Score=48.65 Aligned_cols=39 Identities=21% Similarity=0.417 Sum_probs=31.6
Q ss_pred ceeEEeee------------CCCCeEEEEeCCCCCcccccCcccCCEEEEecc
Q 022783 95 YGLKFAKG------------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSA 135 (292)
Q Consensus 95 lGl~~~~~------------~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa 135 (292)
||+.+..- .+.|++|.+|.|++.|+++ |++||+|+.+-.
T Consensus 255 LGv~~~~~~~~~~~~~~~l~~~~Gv~V~~V~~~spA~~a--l~~GDvI~~idg 305 (539)
T 4fln_A 255 LGVLLQKLENPALRECLKVPTNEGVLVRRVEPTSDASKV--LKEGDVIVSFDD 305 (539)
T ss_dssp CCEEEEECCCHHHHHHHTCSSSBCEEEEEECTTSGGGGT--CCTTCEEEEETT
T ss_pred cceEEEecCCHHHHHhcCCCCcCceeeecccCCChHHhC--ccCCCEEEEECC
Confidence 78877653 2359999999999999864 999999999653
No 422
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=91.77 E-value=0.13 Score=49.96 Aligned_cols=58 Identities=17% Similarity=0.373 Sum_probs=43.5
Q ss_pred CCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhc-c-CCceEEEEeecc
Q 022783 105 GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-R-VGPLLMKMQKRY 169 (292)
Q Consensus 105 G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~-r-~g~v~l~l~r~~ 169 (292)
.+++|.+|.+++.|+++| |++||+|+++-. . +...+..+..+|.. + ...+.|++.|.-
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG---~---~v~~~~~l~~~l~~~~~g~~v~l~v~R~g 345 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNG---K---PISSFAALRAQVGTMPVGSKLTLGLLRDG 345 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSS---S---BCCSSHHHHHHTTSSBTTCCCEEEEESSS
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECC---E---EcCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 589999999999999999 999999998753 2 23334455666664 3 346788888853
No 423
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=89.56 E-value=0.65 Score=38.81 Aligned_cols=37 Identities=16% Similarity=0.320 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccch
Q 022783 215 REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEES 251 (292)
Q Consensus 215 ~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~ 251 (292)
++-.+.+|+.+|+.|+|++|+.+-+..|+++|++...
T Consensus 78 Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA 114 (134)
T 3o48_A 78 RECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQV 114 (134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHH
Confidence 4445799999999999999999999999999987443
No 424
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=88.66 E-value=0.87 Score=39.33 Aligned_cols=64 Identities=13% Similarity=-0.026 Sum_probs=52.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHcC---CCCc---cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 219 LREGLQLYRTGKYEVAREKFESVLGS---KPTP---EESSVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 219 ~n~G~~L~k~gdYeeAIe~fekALel---dP~~---~d~a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
++....++..|.|+.|+-..+.++.+ +|+. .....++++.|-.+...++|..|+..|++||...
T Consensus 24 ~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~ 93 (167)
T 3ffl_A 24 IDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQK 93 (167)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 47778889999999999999997744 3331 2235578999999999999999999999998764
No 425
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=88.64 E-value=1.1 Score=37.80 Aligned_cols=37 Identities=16% Similarity=0.320 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccch
Q 022783 215 REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEES 251 (292)
Q Consensus 215 ~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~ 251 (292)
++-.+.+|+.+|++|+|++|..+-+..|+++|++...
T Consensus 77 RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA 113 (144)
T 1y8m_A 77 RECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQV 113 (144)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHH
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHH
Confidence 3444699999999999999999999999999987444
No 426
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=87.48 E-value=4.3 Score=39.36 Aligned_cols=61 Identities=10% Similarity=-0.035 Sum_probs=49.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHH--cCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 220 REGLQLYRTGKYEVAREKFESVL--GSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 220 n~G~~L~k~gdYeeAIe~fekAL--eldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
-.-..+.+.|+.++|++.|++.. .+.|+ ...|.-+-.+|.+.|++++|++.|++--+.|..
T Consensus 145 ~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd----~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ 207 (501)
T 4g26_A 145 PALFGFCRKGDADKAYEVDAHMVESEVVPE----EPELAALLKVSMDTKNADKVYKTLQRLRDLVRQ 207 (501)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTCCCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCCCCC----HHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCC
Confidence 34455678999999999999988 46676 345777788899999999999999998888754
No 427
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=86.52 E-value=3.8 Score=34.97 Aligned_cols=65 Identities=15% Similarity=0.173 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCc--cc-h--hHHH-HHHHHHHHhcCCHHHHHHHHHHHHH
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTP--EE-S--SVAS-YNVACCYSKLNQVKAGLSALEDALL 280 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~--~d-~--a~a~-YN~AccyakLgq~eeALe~LekAIe 280 (292)
...|..|+.+|..|+|=+|-+.++.+....+.. +. . +.+. .=.|+.|...|+..-|...+.+|+.
T Consensus 33 ~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 33 RRAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999776543 11 1 4455 6677888889999999999999977
No 428
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=85.78 E-value=1.1 Score=45.73 Aligned_cols=76 Identities=7% Similarity=-0.021 Sum_probs=60.2
Q ss_pred hhHHHHHhhHhHHHH-HHHHHHHHHcCCHHHHH-HHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 204 NYMKKKEQKERREQD-LREGLQLYRTGKYEVAR-EKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 204 ~Y~kkk~lk~~~~~~-~n~G~~L~k~gdYeeAI-e~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
.|.++-.......+. +.-+.-+...|+.++|+ +.|++|+..+|.. ..+|...|...-..|+++.|-+.++++++.
T Consensus 331 ~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s---~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~ 407 (679)
T 4e6h_A 331 VYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNS---AVLAFSLSEQYELNTKIPEIETTILSCIDR 407 (679)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 455554444444444 46666667788999998 9999999999973 457999999999999999999999999986
Q ss_pred C
Q 022783 282 G 282 (292)
Q Consensus 282 G 282 (292)
.
T Consensus 408 l 408 (679)
T 4e6h_A 408 I 408 (679)
T ss_dssp H
T ss_pred H
Confidence 4
No 429
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=85.68 E-value=3.5 Score=38.64 Aligned_cols=57 Identities=12% Similarity=0.082 Sum_probs=49.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 022783 220 REGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDAL 279 (292)
Q Consensus 220 n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAI 279 (292)
..+..+...|+|++|+....+++..+|-. + .+|.-+-.+|...|+..+|+..|++.-
T Consensus 176 ~~~~~~l~~g~~~~a~~~l~~~~~~~P~~-E--~~~~~lm~al~~~Gr~~~Al~~y~~~r 232 (388)
T 2ff4_A 176 AKAEAEIACGRASAVIAELEALTFEHPYR-E--PLWTQLITAYYLSDRQSDALGAYRRVK 232 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTC-H--HHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCCCC-H--HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 55666788999999999999999999974 2 268899999999999999999998873
No 430
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=84.70 E-value=1.6 Score=33.21 Aligned_cols=31 Identities=13% Similarity=0.176 Sum_probs=25.9
Q ss_pred HhHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 022783 213 ERREQDLREGLQLYRTGKYEVAREKFESVLG 243 (292)
Q Consensus 213 ~~~~~~~n~G~~L~k~gdYeeAIe~fekALe 243 (292)
.++-+.+.+|+..-+.|+|++|+.+|.+||+
T Consensus 17 ~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 17 EMARKYAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 3345667889999999999999999999885
No 431
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=84.00 E-value=2.7 Score=41.49 Aligned_cols=60 Identities=8% Similarity=-0.038 Sum_probs=54.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 219 LREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 219 ~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
+.+|........++.|..+|.+|+.++|+. +..|+.+|..+...|+.-+|+-+|.+|+-.
T Consensus 156 ~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~---G~~~nqLavla~~~~~~l~a~y~y~rsl~~ 215 (497)
T 1ya0_A 156 VHLGDIARYRNQTSQAESYYRHAAQLVPSN---GQPYNQLAILASSKGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTB---SHHHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHhCCCC---CchHHHHHHHHhcccccHHHHHHHHHHHhc
Confidence 588999988889999999999999999974 677999999999999999999999999754
No 432
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=83.60 E-value=1.3 Score=42.07 Aligned_cols=63 Identities=13% Similarity=-0.026 Sum_probs=52.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 219 LREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 219 ~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
..+|.-+++.|+|++|+++|.++.+........-.++.++..++...++|..+...+++|-.+
T Consensus 135 ~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 135 INLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp HHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 488999999999999999999999765554455567888888888899999999999999544
No 433
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=82.77 E-value=1.6 Score=32.97 Aligned_cols=30 Identities=13% Similarity=0.097 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 022783 214 RREQDLREGLQLYRTGKYEVAREKFESVLG 243 (292)
Q Consensus 214 ~~~~~~n~G~~L~k~gdYeeAIe~fekALe 243 (292)
++-+.+.+|+..-+.|+|++|+.+|.+||+
T Consensus 10 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 10 MARKYAILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 344567889999999999999999999885
No 434
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=81.98 E-value=10 Score=33.76 Aligned_cols=67 Identities=13% Similarity=0.132 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH--c--CCCCc-----------cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVL--G--SKPTP-----------EESSVASYNVACCYSKLNQVKAGLSALEDALL 280 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekAL--e--ldP~~-----------~d~a~a~YN~AccyakLgq~eeALe~LekAIe 280 (292)
-+-+-+.+.+.+.++|..|+.+.++.| . -+|+. .|.-.-+.-.|..+...|+.++||.++.....
T Consensus 63 Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~ 142 (242)
T 3kae_A 63 TSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFG 142 (242)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcC
Confidence 445678899999999999999999999 2 33442 23334466678999999999999999988766
Q ss_pred hC
Q 022783 281 AG 282 (292)
Q Consensus 281 lG 282 (292)
.-
T Consensus 143 ~~ 144 (242)
T 3kae_A 143 KS 144 (242)
T ss_dssp HC
T ss_pred Cc
Confidence 53
No 435
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=81.93 E-value=2 Score=37.03 Aligned_cols=64 Identities=16% Similarity=0.047 Sum_probs=54.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccChh
Q 022783 220 REGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDFK 287 (292)
Q Consensus 220 n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df~ 287 (292)
+-+.- .+.+|.++|-+.|+.++.+...+ +.+|.-.|-.-..+|+...|...|.+||..|..+-+
T Consensus 66 rYA~~-~ei~D~d~aR~vy~~a~~~hKkF---AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~ 129 (161)
T 4h7y_A 66 RFAEL-KAIQEPDDARDYFQMARANCKKF---AFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLE 129 (161)
T ss_dssp HHHHH-HHHHCGGGCHHHHHHHHHHCTTB---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHH
T ss_pred HHHHH-HHhcCHHHHHHHHHHHHHHhHHH---HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHH
Confidence 55533 56699999999999999886654 788999999999999999999999999999987544
No 436
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=81.50 E-value=3.4 Score=32.86 Aligned_cols=50 Identities=26% Similarity=0.355 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHH-HHHHHHHHhc
Q 022783 215 REQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVAS-YNVACCYSKL 265 (292)
Q Consensus 215 ~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~-YN~AccyakL 265 (292)
....+.+|-.+|+.++|.+|+..|+++..+-.+. +...++ +.+.-|-.++
T Consensus 53 ~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~-~i~ki~~fyl~ec~kkl 103 (106)
T 2vkj_A 53 ARSLIAEGKDLFETANYGEALVFFEKALNLSDNE-EIKKIASFYLEECRKKL 103 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHccccCH-HHHHHHHHHHHHHHHHh
Confidence 3556789999999999999999999999544332 332333 6777775543
No 437
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=81.14 E-value=2.5 Score=31.76 Aligned_cols=33 Identities=18% Similarity=0.441 Sum_probs=29.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccc
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTPEE 250 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d 250 (292)
.+.+|..|...|++++|+.+|-+||...|++.+
T Consensus 20 eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~ 52 (73)
T 3ax2_A 20 EIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQ 52 (73)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHH
Confidence 358899999999999999999999999998643
No 438
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=80.67 E-value=11 Score=41.25 Aligned_cols=97 Identities=12% Similarity=0.050 Sum_probs=66.1
Q ss_pred HHHhhccccchhhHHHHHHHhhHHHHHhhHhHHHHHHHHHHHHHcCCHHHHHHHHHHHH--cCCCCccchhHHHHHHHHH
Q 022783 184 IRAERNSGVISNRVREIQMQNYMKKKEQKERREQDLREGLQLYRTGKYEVAREKFESVL--GSKPTPEESSVASYNVACC 261 (292)
Q Consensus 184 ~~a~rN~GvI~~~l~eiqea~Y~kkk~lk~~~~~~~n~G~~L~k~gdYeeAIe~fekAL--eldP~~~d~a~a~YN~Acc 261 (292)
+..+-..|.+..++.-+++-.-...+-..++...+--+-..|.+.|+.++|++.|++.. .+.|+ ...|.-+=.|
T Consensus 134 IdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PD----vvTYntLI~g 209 (1134)
T 3spa_A 134 FKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPD----LLSYAAALQC 209 (1134)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC----HHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCc----HHHHHHHHHH
Confidence 44555667777666555442211122223333333355667789999999999999998 57787 3445556668
Q ss_pred HHhcCCH-HHHHHHHHHHHHhCcc
Q 022783 262 YSKLNQV-KAGLSALEDALLAGYE 284 (292)
Q Consensus 262 yakLgq~-eeALe~LekAIelG~~ 284 (292)
+.+.|+. ++|.+.+++-.+.|+.
T Consensus 210 lcK~G~~~e~A~~Ll~EM~~kG~~ 233 (1134)
T 3spa_A 210 MGRQDQDAGTIERCLEQMSQEGLK 233 (1134)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHTCC
T ss_pred HHhCCCcHHHHHHHHHHHHHcCCC
Confidence 8888985 7899999999999975
No 439
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=80.58 E-value=2.3 Score=32.43 Aligned_cols=29 Identities=14% Similarity=0.226 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 022783 215 REQDLREGLQLYRTGKYEVAREKFESVLG 243 (292)
Q Consensus 215 ~~~~~n~G~~L~k~gdYeeAIe~fekALe 243 (292)
+.+.+..|+.+-+.|+|++|+.+|.+|++
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34556888999999999999999999885
No 440
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=80.21 E-value=5.5 Score=38.58 Aligned_cols=61 Identities=7% Similarity=-0.010 Sum_probs=50.4
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHH--cCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 220 REGLQLYRTGKYEVAREKFESVL--GSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 220 n~G~~L~k~gdYeeAIe~fekAL--eldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
..-..+.+.|++++|++.|++.. .+.|+ ...|.-+=.+|++.|++++|++.+++-.+.|..
T Consensus 110 ~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd----~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~ 172 (501)
T 4g26_A 110 NGARLAVAKDDPEMAFDMVKQMKAFGIQPR----LRSYGPALFGFCRKGDADKAYEVDAHMVESEVV 172 (501)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHTTCCCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHcCCCCc----cceehHHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 44556788999999999999987 46676 345666677899999999999999999999865
No 441
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=77.53 E-value=4.1 Score=31.55 Aligned_cols=60 Identities=27% Similarity=0.290 Sum_probs=48.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHcCCCCccch---hHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 022783 219 LREGLQLYRTGKYEVAREKFESVLGSKPTPEES---SVASYNVACCYSKLNQVKAGLSALEDALL 280 (292)
Q Consensus 219 ~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~---a~a~YN~AccyakLgq~eeALe~LekAIe 280 (292)
+..|..+|..|+|=+|-+.++......|.++.. +.+..=.|+.|...|+. |...+.+|+.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 578999999999999999999999666652111 45566667778888998 9999999977
No 442
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=76.26 E-value=6.8 Score=34.94 Aligned_cols=55 Identities=24% Similarity=0.396 Sum_probs=45.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 219 LREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 219 ~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
+-.++.||-.|.|..|+-... .+| ...+.|..+.||.++.+|..|+.++++-|+-
T Consensus 37 lL~~I~LyyngEY~R~Lf~L~---~lN-----T~Ts~YYk~LCy~klKdYkkA~~~le~il~~ 91 (242)
T 3kae_A 37 MLMSIVLYLNGEYTRALFHLH---KLN-----TCTSKYYESLCYKKKKDYKKAIKSLESILEG 91 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH---TCC-----BHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred hhhhhhhhhcchHhHHHHHHH---hcc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 367899999999999887654 233 2456889999999999999999999999843
No 443
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=75.92 E-value=3.8 Score=31.54 Aligned_cols=29 Identities=14% Similarity=0.223 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 022783 215 REQDLREGLQLYRTGKYEVAREKFESVLG 243 (292)
Q Consensus 215 ~~~~~n~G~~L~k~gdYeeAIe~fekALe 243 (292)
+-+.+..|+.+-+.|+|++|+.+|..|++
T Consensus 15 Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 15 AVAVLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34556888889999999999999988874
No 444
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=74.95 E-value=4 Score=30.55 Aligned_cols=28 Identities=18% Similarity=0.233 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLG 243 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALe 243 (292)
...+..|+..-+.|+|++|+.+|..|++
T Consensus 14 ~~l~~~Av~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 14 IELVQKAIDLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3456788888899999999999999886
No 445
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=72.38 E-value=3.1 Score=33.52 Aligned_cols=28 Identities=18% Similarity=0.215 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLG 243 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALe 243 (292)
...+.+|+..-+.|+|++|+.+|..|++
T Consensus 19 i~lv~~Ave~D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 19 IDLASKAAQEDKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 3456778888888999999999988875
No 446
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=70.47 E-value=7.7 Score=37.29 Aligned_cols=52 Identities=8% Similarity=-0.043 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCccCh
Q 022783 231 YEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDF 286 (292)
Q Consensus 231 YeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~Df 286 (292)
.+.....|+++|...|.. ..+|++.|..+...|+.++|...+++|+.. +.+.
T Consensus 195 ~~Rv~~~ye~al~~~p~~---~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~ 246 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYA---EEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGM 246 (493)
T ss_dssp HHHHHHHHHHHHHHTTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSS
T ss_pred HHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcH
Confidence 455778999999988874 568999999999999999999999999998 6643
No 447
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.65 E-value=6.8 Score=31.95 Aligned_cols=38 Identities=16% Similarity=0.162 Sum_probs=28.2
Q ss_pred hHHHHHhhHhHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 022783 205 YMKKKEQKERREQDLREGLQLYRTGKYEVAREKFESVL 242 (292)
Q Consensus 205 Y~kkk~lk~~~~~~~n~G~~L~k~gdYeeAIe~fekAL 242 (292)
|...|.-..+++.+++.|+.+-+.|+-++|+.+|.++|
T Consensus 12 l~~ik~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI 49 (116)
T 2dl1_A 12 IKIIREAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGI 49 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHH
Confidence 34444445566788899999988898888888877766
No 448
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=66.54 E-value=14 Score=35.30 Aligned_cols=61 Identities=16% Similarity=0.078 Sum_probs=48.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHcCCCCccch---hHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 022783 220 REGLQLYRTGKYEVAREKFESVLGSKPTPEES---SVASYNVACCYSKLNQVKAGLSALEDALL 280 (292)
Q Consensus 220 n~G~~L~k~gdYeeAIe~fekALeldP~~~d~---a~a~YN~AccyakLgq~eeALe~LekAIe 280 (292)
++|..|+..|+|.+|++.+.+.+......++. -..|-...-.|..++++.++-..+++|..
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~ 167 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSART 167 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 78999999999999999999999533322122 33477778889999999999999999854
No 449
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=64.92 E-value=5.9 Score=30.93 Aligned_cols=37 Identities=14% Similarity=0.144 Sum_probs=28.6
Q ss_pred HHHHHhhHhHHHHHHHHHHHHHc---CCHHHHHHHHHHHH
Q 022783 206 MKKKEQKERREQDLREGLQLYRT---GKYEVAREKFESVL 242 (292)
Q Consensus 206 ~kkk~lk~~~~~~~n~G~~L~k~---gdYeeAIe~fekAL 242 (292)
.+.|.-..+++.+++.|+..-+. |+-++|+.+|.+++
T Consensus 7 ~~ik~~h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi 46 (89)
T 3eab_A 7 ERVRVFHKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGI 46 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHH
Confidence 34455556678888999999888 88888888888776
No 450
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=64.72 E-value=48 Score=32.02 Aligned_cols=46 Identities=13% Similarity=0.171 Sum_probs=35.6
Q ss_pred HHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 022783 225 LYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDA 278 (292)
Q Consensus 225 L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekA 278 (292)
..+.|++++|++.. ..++. ...|-++|-.+.+.++++.|..+|.++
T Consensus 662 ~l~~~~~~~A~~~~---~~~~~-----~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 662 ALKVGQLTLARDLL---TDESA-----EMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHTCHHHHHHHH---TTCCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhcCCHHHHHHHH---HhhCc-----HhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 45678888888774 23332 246999999999999999999999886
No 451
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=62.53 E-value=5.1 Score=31.57 Aligned_cols=31 Identities=19% Similarity=0.432 Sum_probs=28.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHcCCCCc
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLGSKPTP 248 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALeldP~~ 248 (292)
.+.+|..|...|++++|+.+|-+||...|++
T Consensus 23 eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP 53 (95)
T 1om2_A 23 EIQLGEELLAQGDYEKGVDHLTNAIAVCGQP 53 (95)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 3588999999999999999999999999985
No 452
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=60.59 E-value=8 Score=30.63 Aligned_cols=23 Identities=30% Similarity=0.335 Sum_probs=20.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHH
Q 022783 220 REGLQLYRTGKYEVAREKFESVL 242 (292)
Q Consensus 220 n~G~~L~k~gdYeeAIe~fekAL 242 (292)
.++..+.+.|+|++||++..+|.
T Consensus 20 RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 20 RRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHhcCCHHHHHHHHHHHH
Confidence 56788899999999999988876
No 453
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=60.27 E-value=57 Score=28.03 Aligned_cols=66 Identities=15% Similarity=0.197 Sum_probs=48.1
Q ss_pred HHHHHHHHHH-HHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 216 EQDLREGLQL-YRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 216 ~~~~n~G~~L-~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
.+++++|+.. -+.|+-++=-+.+...+..+|- .+.+++-+|.+|.++|+..+|-+.+.+|-+.|..
T Consensus 91 se~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~---~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG~k 157 (172)
T 1wy6_A 91 NEHVNKALDILVIQGKRDKLEEIGREILKNNEV---SASILVAIANALRRVGDERDATTLLIEACKKGEK 157 (172)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHC--CCS---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhccHhHHHHHHHHHhccCCC---ChHHHHHHHHHHHHhcchhhHHHHHHHHHHhhhH
Confidence 4567888776 4567766555555554543331 1457999999999999999999999999999965
No 454
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=59.21 E-value=25 Score=32.45 Aligned_cols=59 Identities=10% Similarity=0.025 Sum_probs=47.3
Q ss_pred HHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 223 LQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 223 ~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
..+++.|+.++||+.....+.-+|.+.+....++-+= +..|+|+.|+.-|+-+.++..+
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLL---cv~G~w~RA~~QL~~~a~l~p~ 63 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELL---CIDGDFERADEQLMQSIKLFPE 63 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHH---HHHTCHHHHHHHHHHHHHHCGG
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHhCch
Confidence 3567889999999999999999998755555555544 4569999999999999888755
No 455
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=56.23 E-value=26 Score=37.41 Aligned_cols=69 Identities=10% Similarity=-0.131 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHc-CCCCc-------------------cchhHHHHHHHHHHHhcCCHHHHHHHHH
Q 022783 217 QDLREGLQLYRTGKYEVAREKFESVLG-SKPTP-------------------EESSVASYNVACCYSKLNQVKAGLSALE 276 (292)
Q Consensus 217 ~~~n~G~~L~k~gdYeeAIe~fekALe-ldP~~-------------------~d~a~a~YN~AccyakLgq~eeALe~Le 276 (292)
..|=+|..+...|+|++|..+|.+|-. +..+. .-....|+.+...+.+.+.++.+++...
T Consensus 844 ~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~ 923 (1139)
T 4fhn_B 844 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSL 923 (1139)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 346789999999999999999999852 21111 0012336667778999999999999999
Q ss_pred HHHHhCccC
Q 022783 277 DALLAGYED 285 (292)
Q Consensus 277 kAIelG~~D 285 (292)
.||+..-.+
T Consensus 924 lAi~~~~~~ 932 (1139)
T 4fhn_B 924 LADASKETD 932 (1139)
T ss_dssp HHHHHCCSC
T ss_pred HHHHhccCC
Confidence 999876543
No 456
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=54.34 E-value=26 Score=32.04 Aligned_cols=54 Identities=19% Similarity=0.177 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHc----CCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHHHHHHhCccC
Q 022783 232 EVAREKFESVLG----SKPTPEESSVASYNVACCYSK-LNQVKAGLSALEDALLAGYED 285 (292)
Q Consensus 232 eeAIe~fekALe----ldP~~~d~a~a~YN~Accyak-Lgq~eeALe~LekAIelG~~D 285 (292)
+.|...|++|++ +.|..+-.--+.-|-+.+|+. +++.++|+...++|++-...+
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~e 231 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQ 231 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 567888888884 667655554467777877776 899999999999988755443
No 457
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=53.43 E-value=21 Score=36.30 Aligned_cols=50 Identities=10% Similarity=0.042 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCCH----HHHHHHHHHHHHh
Q 022783 231 YEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQV----KAGLSALEDALLA 281 (292)
Q Consensus 231 YeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq~----eeALe~LekAIel 281 (292)
++.+...|++||...|.+... .+|..-+-.....++. +++.+.+.++.+.
T Consensus 119 ~~~v~~lfeRal~~~~~~~sv-~LW~~Yl~f~~~~~~~~~~~~~~r~~vr~~FEr 172 (679)
T 4e6h_A 119 AAVIEPVLARCLSKELGNNDL-SLWLSYITYVRKKNDIITGGEEARNIVIQAFQV 172 (679)
T ss_dssp HHHHHHHHHHHTCSSSCCCCH-HHHHHHHHHHHHHSCSTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCH-HHHHHHHHHHHHhcccccccchhHHHHHHHHHH
Confidence 666666666666555211122 3455444333334443 4455555555553
No 458
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=52.99 E-value=23 Score=31.78 Aligned_cols=53 Identities=15% Similarity=0.094 Sum_probs=39.2
Q ss_pred HHHHHHHHHHH-----cCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHHHHHHhCcc
Q 022783 232 EVAREKFESVL-----GSKPTPEESSVASYNVACCYSK-LNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 232 eeAIe~fekAL-----eldP~~~d~a~a~YN~Accyak-Lgq~eeALe~LekAIelG~~ 284 (292)
+.|...|++|+ ++.|..+-.--+.-|-+.+|.. +++.++|+...++|++-...
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~ 205 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIA 205 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 56777888887 3778765554467777777766 89999999998888765433
No 459
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=51.57 E-value=11 Score=28.44 Aligned_cols=27 Identities=19% Similarity=0.350 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 022783 217 QDLREGLQLYRTGKYEVAREKFESVLG 243 (292)
Q Consensus 217 ~~~n~G~~L~k~gdYeeAIe~fekALe 243 (292)
+.+.+|-.+.-+|+|+.|+.+|+.+++
T Consensus 14 e~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 14 ENVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 345788888999999999999999984
No 460
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=48.80 E-value=40 Score=36.81 Aligned_cols=61 Identities=13% Similarity=-0.125 Sum_probs=50.4
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHH-----cCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 220 REGLQLYRTGKYEVAREKFESVL-----GSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 220 n~G~~L~k~gdYeeAIe~fekAL-----eldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
-+-..|.+.|+.++|.+.|++.- ...|+ ...|+=+=..|++.|++++|++.+++-.+.|+.
T Consensus 132 aLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd----vvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~ 197 (1134)
T 3spa_A 132 AFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT----LDMYNAVMLGWARQGAFKELVYVLFMVKDAGLT 197 (1134)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC----HhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCC
Confidence 44556799999999999997643 46786 345777778899999999999999999999975
No 461
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=47.21 E-value=32 Score=31.26 Aligned_cols=52 Identities=13% Similarity=0.106 Sum_probs=37.9
Q ss_pred HHHHHHHHHHH-----cCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHHHHHHhCc
Q 022783 232 EVAREKFESVL-----GSKPTPEESSVASYNVACCYSK-LNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 232 eeAIe~fekAL-----eldP~~~d~a~a~YN~Accyak-Lgq~eeALe~LekAIelG~ 283 (292)
+.|...|++|+ ++.|..+-.--+.-|-+.+|.. +++.++|+...++|++-..
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai 205 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAI 205 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 56777788776 4778765554457777777665 7999999998888876543
No 462
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=46.42 E-value=33 Score=31.45 Aligned_cols=52 Identities=15% Similarity=0.096 Sum_probs=38.8
Q ss_pred HHHHHHHHHHH-----cCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHHHHHHhCc
Q 022783 232 EVAREKFESVL-----GSKPTPEESSVASYNVACCYSK-LNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 232 eeAIe~fekAL-----eldP~~~d~a~a~YN~Accyak-Lgq~eeALe~LekAIelG~ 283 (292)
+.|...|++|+ ++.|..+-.--+.-|-+.+|.. +++.++|+...++|++-..
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai 230 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 230 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 66788888887 4777765554567777777666 7999999998888876543
No 463
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=44.80 E-value=32 Score=31.35 Aligned_cols=51 Identities=16% Similarity=0.140 Sum_probs=38.2
Q ss_pred HHHHHHHHHHH-----cCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHHHHHHhC
Q 022783 232 EVAREKFESVL-----GSKPTPEESSVASYNVACCYSK-LNQVKAGLSALEDALLAG 282 (292)
Q Consensus 232 eeAIe~fekAL-----eldP~~~d~a~a~YN~Accyak-Lgq~eeALe~LekAIelG 282 (292)
+.|...|++|+ ++.|..+-.--+.-|-+.+|+. +++.++|+...++|++-.
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~A 208 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 46788888887 3778765554567777877766 799999999888887554
No 464
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=43.26 E-value=25 Score=35.16 Aligned_cols=58 Identities=5% Similarity=-0.036 Sum_probs=43.9
Q ss_pred HHcCCHHHHHHHHHHHHcCCC--CccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 226 YRTGKYEVAREKFESVLGSKP--TPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 226 ~k~gdYeeAIe~fekALeldP--~~~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
...+.|+.|....+++.-.+. .+.+..--+|+.|.++.-+++|.+|-++|..|+..-+
T Consensus 242 L~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap 301 (523)
T 4b4t_S 242 LNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAP 301 (523)
T ss_dssp HHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCS
T ss_pred HccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 567899999999999862211 2223344588899999999999999999999986543
No 465
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=43.07 E-value=35 Score=34.09 Aligned_cols=58 Identities=7% Similarity=-0.088 Sum_probs=41.9
Q ss_pred CeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccccchhhHHHHhhccCCceEEEEeeccCC
Q 022783 106 GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRYGK 171 (292)
Q Consensus 106 ~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a~~~g~~~~ai~~r~g~v~l~l~r~~~~ 171 (292)
+|.|..|.|++.|+..| ++.||+|+.+-. -++..+.....+|+.-.+ =+|+|+...+.
T Consensus 416 gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg------~~V~s~~~l~~~l~~~k~-~~l~~~~~~~~ 473 (539)
T 4fln_A 416 IVILSQVLANEVNIGYE-DMNNQQVLKFNG------IPIRNIHHLAHLIDMCKD-KYLVFEFEDNY 473 (539)
T ss_dssp CEEEEEECCCGGGTTCS-SCCSEEEEEETT------EECCSHHHHHHHHHTCCS-SEEEEEETTSC
T ss_pred EEEEEEecCCchhhhcC-CCCCCEEEeECC------EEcCCHHHHHHHHHHcCC-CeEEEEECCCE
Confidence 89999999999999998 899999999763 256666666777763322 34455544454
No 466
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=42.18 E-value=65 Score=29.63 Aligned_cols=92 Identities=10% Similarity=-0.085 Sum_probs=59.3
Q ss_pred HhhccccchhhHHHHHHHhhHHHHHhhHhHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccch--------------
Q 022783 186 AERNSGVISNRVREIQMQNYMKKKEQKERREQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEES-------------- 251 (292)
Q Consensus 186 a~rN~GvI~~~l~eiqea~Y~kkk~lk~~~~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~-------------- 251 (292)
.+...|.+...+...+.+- |....+...-..+-..|+-.|+|+.|++..+...+++|...-.
T Consensus 6 ~ll~~g~L~~al~~~~~~V----R~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE~~R 81 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAI----KASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQAR 81 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHH----HTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHH----HhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHH
Confidence 4455666666665555431 1111222222355667788999999999999999999984111
Q ss_pred ------------------hHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 252 ------------------SVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 252 ------------------a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
-...--.|......|+.++|.+..++|++.
T Consensus 82 ~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ 129 (273)
T 1zbp_A 82 KDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEEL 129 (273)
T ss_dssp HHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhc
Confidence 112233355556678999999999999887
No 467
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=42.00 E-value=35 Score=30.70 Aligned_cols=52 Identities=13% Similarity=0.126 Sum_probs=37.9
Q ss_pred HHHHHHHHHHH-----cCCCCccchhHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhCc
Q 022783 232 EVAREKFESVL-----GSKPTPEESSVASYNVACCYS-KLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 232 eeAIe~fekAL-----eldP~~~d~a~a~YN~Accya-kLgq~eeALe~LekAIelG~ 283 (292)
+.|...|++|+ ++.|..+-.--+.-|-+.+|. -+++.++|+...++|++-..
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai 207 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAM 207 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 56777888876 477876555446777777766 56999999998888876543
No 468
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=40.82 E-value=1.3e+02 Score=28.53 Aligned_cols=63 Identities=14% Similarity=0.068 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHc----CCCCccchhHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVLG----SKPTPEESSVASYNVACCYS-KLNQVKAGLSALEDALL 280 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekALe----ldP~~~d~a~a~YN~Accya-kLgq~eeALe~LekAIe 280 (292)
.+.+...++..+++.++-..|++|.. +.+++.-.+.+..--|..|. ..++|..|-..+-+|.+
T Consensus 142 ~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~ 209 (394)
T 3txn_A 142 QLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFE 209 (394)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHh
Confidence 34778888999999999999999974 32333233556666677888 89999999999999863
No 469
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=39.10 E-value=31 Score=26.02 Aligned_cols=29 Identities=7% Similarity=0.033 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 253 VASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 253 ~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
.-+..+|.-.-..|+|++|+..+..||+.
T Consensus 17 ~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 17 ATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34566666667778888888888888765
No 470
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=39.02 E-value=1.8e+02 Score=26.78 Aligned_cols=64 Identities=19% Similarity=0.214 Sum_probs=46.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHcCCCCc-------------------cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 022783 220 REGLQLYRTGKYEVAREKFESVLGSKPTP-------------------EESSVASYNVACCYSKLNQVKAGLSALEDALL 280 (292)
Q Consensus 220 n~G~~L~k~gdYeeAIe~fekALeldP~~-------------------~d~a~a~YN~AccyakLgq~eeALe~LekAIe 280 (292)
..|......|+.++|++.+.+||.+=-.. .....+..-++-++..+|++++|+..|.+++.
T Consensus 120 ~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~ 199 (388)
T 2ff4_A 120 TAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTF 199 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 45555667889999999999999753211 01123455677788899999999999999988
Q ss_pred hCc
Q 022783 281 AGY 283 (292)
Q Consensus 281 lG~ 283 (292)
..+
T Consensus 200 ~~P 202 (388)
T 2ff4_A 200 EHP 202 (388)
T ss_dssp HST
T ss_pred hCC
Confidence 754
No 471
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=38.05 E-value=71 Score=30.32 Aligned_cols=52 Identities=13% Similarity=0.150 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHcCCCCc-----cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 231 YEVAREKFESVLGSKPTP-----EESSVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 231 YeeAIe~fekALeldP~~-----~d~a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
|+.-++-++.|+++=|.. .....++-=+|.+|.-+++|++|++.++++|+.|
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 344444455555433321 1235678889999999999999999999999875
No 472
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=37.65 E-value=50 Score=31.90 Aligned_cols=59 Identities=15% Similarity=0.175 Sum_probs=38.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHcCC--------CCccch----h-----HHHHHHHH-HHHhcCCHHHHHHHHHH
Q 022783 219 LREGLQLYRTGKYEVAREKFESVLGSK--------PTPEES----S-----VASYNVAC-CYSKLNQVKAGLSALED 277 (292)
Q Consensus 219 ~n~G~~L~k~gdYeeAIe~fekALeld--------P~~~d~----a-----~a~YN~Ac-cyakLgq~eeALe~Lek 277 (292)
-+.|..+.+.++++.|+.+|.++=..+ ..+.+. + .-.+|.|- ||.++|++++|++.|.+
T Consensus 685 ~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~ 761 (814)
T 3mkq_A 685 RALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIK 761 (814)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHH
Confidence 488999999999999999999862111 111010 0 01244454 67778999999888754
No 473
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=37.21 E-value=32 Score=27.19 Aligned_cols=26 Identities=12% Similarity=-0.040 Sum_probs=21.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHH
Q 022783 255 SYNVACCYSKLNQVKAGLSALEDALL 280 (292)
Q Consensus 255 ~YN~AccyakLgq~eeALe~LekAIe 280 (292)
+--+|-.+.+.|+|++||++..+|..
T Consensus 18 ~~RrAe~ll~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 18 QSRRADRLLAAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 44567777889999999999998864
No 474
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=36.84 E-value=48 Score=25.22 Aligned_cols=27 Identities=7% Similarity=0.053 Sum_probs=15.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 255 SYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 255 ~YN~AccyakLgq~eeALe~LekAIel 281 (292)
+.++|.-.-..|+|++|+..+..||+.
T Consensus 18 lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 18 VLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 344444445556666666666666554
No 475
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=36.65 E-value=55 Score=30.07 Aligned_cols=50 Identities=18% Similarity=0.100 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHc-----C--CCCccchhHHHHHHHHHHH-hcCCHHHHHHHHHHHHHh
Q 022783 232 EVAREKFESVLG-----S--KPTPEESSVASYNVACCYS-KLNQVKAGLSALEDALLA 281 (292)
Q Consensus 232 eeAIe~fekALe-----l--dP~~~d~a~a~YN~Accya-kLgq~eeALe~LekAIel 281 (292)
+.|...|++|++ + .|..+-.--+.-|-+.+|. -+++.++|+...++|++-
T Consensus 169 e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 566677777662 4 7776555456778888877 579999999999999887
No 476
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=35.76 E-value=51 Score=24.68 Aligned_cols=26 Identities=12% Similarity=0.031 Sum_probs=14.3
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 256 YNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 256 YN~AccyakLgq~eeALe~LekAIel 281 (292)
-.+|.-.-+.|++++|+..+.+||+.
T Consensus 23 v~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 23 AINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 33344444556666666666666553
No 477
>3pjy_A Hypothetical signal peptide protein; DUF192 family protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.55A {Sinorhizobium meliloti}
Probab=34.99 E-value=17 Score=29.85 Aligned_cols=27 Identities=19% Similarity=0.455 Sum_probs=20.4
Q ss_pred CCCeEEEEeCCCCCcccccCcccCCEEEE
Q 022783 104 DGGTYIDAIAPGGSADKTGMFQVGDKVLA 132 (292)
Q Consensus 104 ~G~v~V~~v~~ggnA~k~g~i~vGD~l~~ 132 (292)
..--||-|+.. |-+++.| |++||+|.-
T Consensus 100 ~~a~~VLEl~a-G~~~~~g-i~~Gd~v~~ 126 (136)
T 3pjy_A 100 EPVAYVLELNA-GTVKRLG-VSPGDRLEG 126 (136)
T ss_dssp SCEEEEEEEET-THHHHHT-CCTTCEEEE
T ss_pred CceeEEEEeCc-ChHHhcC-CCCCCEEEE
Confidence 33568888865 4567778 999999974
No 478
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=34.50 E-value=60 Score=30.74 Aligned_cols=32 Identities=9% Similarity=0.054 Sum_probs=28.1
Q ss_pred hhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 251 SSVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 251 ~a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
...++--+|.+|..+++|++|++.++++|+.|
T Consensus 189 k~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 220 (454)
T 3myv_A 189 KYAARALLARIYLYHDDNRKAFDLADQLIKDA 220 (454)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHhCC
Confidence 35678889999999999999999999999853
No 479
>1jt8_A EIF-1A, probable translation initiation factor 1A; beta barrel, translation factor; NMR {Methanocaldococcus jannaschii} SCOP: b.40.4.5
Probab=34.05 E-value=29 Score=27.36 Aligned_cols=46 Identities=26% Similarity=0.190 Sum_probs=29.9
Q ss_pred ceEEEEecCCce--eEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEE
Q 022783 85 EEYEVEIEQPYG--LKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLA 132 (292)
Q Consensus 85 ~~~~v~l~KPlG--l~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~ 132 (292)
.+....+.+.|| +.--+..||..+...|.-. --|.=-|..||+|+-
T Consensus 20 ~e~~g~V~~~lgn~~~~V~l~nG~~~la~i~GK--mRk~IwI~~GD~VlV 67 (102)
T 1jt8_A 20 NEILGIIEQMLGASRVRVRCLDGKTRLGRIPGR--LKNRIWVREGDVVIV 67 (102)
T ss_dssp CCEEEEEECSSCSSEEEEEEETTEEEEEECCHH--HHHHHCCCSCEEEEE
T ss_pred CEEEEEEEEEcCCCEEEEEECCCCEEEEEEccc--ceeeEEecCCCEEEE
Confidence 567778888888 3333446787777777622 233335788888876
No 480
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=33.66 E-value=51 Score=28.23 Aligned_cols=72 Identities=13% Similarity=0.075 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHcCCH------HHHHHHHHHHHcCCCCc-----cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Q 022783 215 REQDLREGLQLYRTGKY------EVAREKFESVLGSKPTP-----EESSVASYNVACCYSKLNQVKAGLSALEDALLAGY 283 (292)
Q Consensus 215 ~~~~~n~G~~L~k~gdY------eeAIe~fekALeldP~~-----~d~a~a~YN~AccyakLgq~eeALe~LekAIelG~ 283 (292)
.+.++.-...+-+.|+- ++-++.|++|+..-|.. +-+..+|-+-|.. ..+++.++|-+.++.|+++ =
T Consensus 13 yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~-h 90 (161)
T 4h7y_A 13 PEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARAN-C 90 (161)
T ss_dssp HHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHH-C
T ss_pred HHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHH-h
Confidence 35566666666666888 88999999999644432 2235678888866 5669999999999999987 3
Q ss_pred cChhh
Q 022783 284 EDFKV 288 (292)
Q Consensus 284 ~Df~~ 288 (292)
..|.+
T Consensus 91 KkFAK 95 (161)
T 4h7y_A 91 KKFAF 95 (161)
T ss_dssp TTBHH
T ss_pred HHHHH
Confidence 44443
No 481
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=33.23 E-value=9 Score=35.08 Aligned_cols=27 Identities=15% Similarity=0.250 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 022783 217 QDLREGLQLYRTGKYEVAREKFESVLG 243 (292)
Q Consensus 217 ~~~n~G~~L~k~gdYeeAIe~fekALe 243 (292)
+.+.+|+.+-+.|+|++|+.+|.+|++
T Consensus 25 ~lv~~AVe~D~~g~y~eAl~lY~eaIe 51 (257)
T 2ymb_A 25 TVLKRAVELDSESRYPQALVCYQEGID 51 (257)
T ss_dssp ---------------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345888899999999999999999985
No 482
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=32.62 E-value=57 Score=25.05 Aligned_cols=49 Identities=8% Similarity=0.002 Sum_probs=31.4
Q ss_pred chhhHHHHHHH-hhHHHHHhhHhHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 022783 193 ISNRVREIQMQ-NYMKKKEQKERREQDLREGLQLYRTGKYEVAREKFESV 241 (292)
Q Consensus 193 I~~~l~eiqea-~Y~kkk~lk~~~~~~~n~G~~L~k~gdYeeAIe~fekA 241 (292)
+..+|..+... .+......-..+..+++.|.-+++.||+..|+.++.=|
T Consensus 16 leeaL~~i~~~~l~~~a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa 65 (87)
T 2pmr_A 16 LEKNLMEMKSIKLSDDEEAVVERALNYRDDSVYYLEKGDHITSFGCITYA 65 (87)
T ss_dssp HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34444444432 24444555556677788888888888888888877543
No 483
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=32.53 E-value=33 Score=25.82 Aligned_cols=27 Identities=15% Similarity=0.172 Sum_probs=23.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 255 SYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 255 ~YN~AccyakLgq~eeALe~LekAIel 281 (292)
.-.+|.=|+.+|+|+.|+..++.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 567888899999999999999999763
No 484
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=32.31 E-value=63 Score=23.99 Aligned_cols=14 Identities=14% Similarity=0.140 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHcCC
Q 022783 232 EVAREKFESVLGSK 245 (292)
Q Consensus 232 eeAIe~fekALeld 245 (292)
+.|++...+|++.|
T Consensus 9 ~~Ai~lv~~Ave~D 22 (83)
T 2v6y_A 9 DMARKYAILAVKAD 22 (83)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 46666666666554
No 485
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=32.11 E-value=1.1e+02 Score=29.11 Aligned_cols=62 Identities=15% Similarity=0.005 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCccchhHHHHHHHHHHHhcCC-HHHHHHHHHHHHHh
Q 022783 216 EQDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQ-VKAGLSALEDALLA 281 (292)
Q Consensus 216 ~~~~n~G~~L~k~gdYeeAIe~fekALeldP~~~d~a~a~YN~AccyakLgq-~eeALe~LekAIel 281 (292)
...++.++..+-.|+++.|..+|+++|...|. ..+|..-+-.-.+.++ .+.....++.|+..
T Consensus 15 R~vyer~l~~~P~~~~e~~~~iferal~~~ps----~~LW~~Y~~f~~~~~~~~~~i~~~fe~al~~ 77 (493)
T 2uy1_A 15 SAIMEHARRLYMSKDYRSLESLFGRCLKKSYN----LDLWMLYIEYVRKVSQKKFKLYEVYEFTLGQ 77 (493)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHSTTCCC----HHHHHHHHHHHHHHC----CTHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHhccCCC----HHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 34567888888889999999999999998895 2367776666666553 35566677888764
No 486
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=32.06 E-value=74 Score=30.68 Aligned_cols=33 Identities=12% Similarity=0.012 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCcc
Q 022783 252 SVASYNVACCYSKLNQVKAGLSALEDALLAGYE 284 (292)
Q Consensus 252 a~a~YN~AccyakLgq~eeALe~LekAIelG~~ 284 (292)
..++-=+|.+|..+++|++|++.++++|+.||.
T Consensus 182 ~aA~allarv~L~~~~~~~A~~~a~~vi~~gy~ 214 (517)
T 3qnk_A 182 GAAYALKSRVELYDKRYEDVIKSCAEVYKLGYE 214 (517)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 567888999999999999999999999998853
No 487
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=31.46 E-value=67 Score=23.64 Aligned_cols=27 Identities=15% Similarity=-0.012 Sum_probs=16.0
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 255 SYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 255 ~YN~AccyakLgq~eeALe~LekAIel 281 (292)
+..+|.-.-..|++++|+..+..|+++
T Consensus 16 l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 16 LVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 334444444557777777777777664
No 488
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=30.37 E-value=58 Score=25.95 Aligned_cols=19 Identities=16% Similarity=0.172 Sum_probs=10.6
Q ss_pred HhcCCHHHHHHHHHHHHHh
Q 022783 263 SKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 263 akLgq~eeALe~LekAIel 281 (292)
-..|+|++|+..|..||++
T Consensus 29 D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 29 DKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHTCHHHHHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHHH
Confidence 3445666666666665553
No 489
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=29.71 E-value=11 Score=35.82 Aligned_cols=29 Identities=17% Similarity=0.201 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 022783 215 REQDLREGLQLYRTGKYEVAREKFESVLG 243 (292)
Q Consensus 215 ~~~~~n~G~~L~k~gdYeeAIe~fekALe 243 (292)
+-+.+.+|+.+-+.|+|++|+.+|.+|++
T Consensus 11 A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~ 39 (444)
T 2zan_A 11 AIDLASKAAQEDKAGNYEEALQLYQHAVQ 39 (444)
T ss_dssp -----------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34556888888999999999999999885
No 490
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=29.59 E-value=1.4e+02 Score=29.99 Aligned_cols=51 Identities=14% Similarity=0.040 Sum_probs=29.9
Q ss_pred CCHHHHHHHHHHHHcCC-CCc-----------cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 022783 229 GKYEVAREKFESVLGSK-PTP-----------EESSVASYNVACCYSKLNQVKAGLSALEDALL 280 (292)
Q Consensus 229 gdYeeAIe~fekALeld-P~~-----------~d~a~a~YN~AccyakLgq~eeALe~LekAIe 280 (292)
..|++||+.++++-..+ |+. +..+. ||-.|.=.+..|+.++|-..-.+|-+
T Consensus 453 ~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~aGD-yy~~AA~k~~yG~~eqAe~l~~~A~~ 515 (526)
T 2wb7_A 453 DEYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMAGD-YYVNAARKALNGDLEQAKIDAEKAKE 515 (526)
T ss_dssp HHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhccH-HHHHHHHHHhcCccHHHHHHHHHHHH
Confidence 45566666666665332 221 11122 56666677777888888777777744
No 491
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=28.25 E-value=79 Score=29.96 Aligned_cols=31 Identities=16% Similarity=0.112 Sum_probs=27.6
Q ss_pred hhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 251 SSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 251 ~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
...++-=+|.+|.-+++|++|++.++++|+.
T Consensus 195 k~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 195 RWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 3567888999999999999999999999985
No 492
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=27.84 E-value=2.4e+02 Score=26.69 Aligned_cols=62 Identities=10% Similarity=-0.094 Sum_probs=45.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHH----cCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 022783 219 LREGLQLYRTGKYEVAREKFESVL----GSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALL 280 (292)
Q Consensus 219 ~n~G~~L~k~gdYeeAIe~fekAL----eldP~~~d~a~a~YN~AccyakLgq~eeALe~LekAIe 280 (292)
+.....+...++|..|-..+.++. ...+.+.-....+.-.+..|...++|.+|-.++-.+.+
T Consensus 181 l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~ 246 (445)
T 4b4t_P 181 LEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQ 246 (445)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 467777888999999999999874 33332212234466667778888999999988888865
No 493
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=27.53 E-value=1.4e+02 Score=31.34 Aligned_cols=64 Identities=9% Similarity=-0.118 Sum_probs=49.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH-cCCCCc-----------------cc--hhHHHHHHHHHHHhcCCHHHHHHHHHH
Q 022783 218 DLREGLQLYRTGKYEVAREKFESVL-GSKPTP-----------------EE--SSVASYNVACCYSKLNQVKAGLSALED 277 (292)
Q Consensus 218 ~~n~G~~L~k~gdYeeAIe~fekAL-eldP~~-----------------~d--~a~a~YN~AccyakLgq~eeALe~Lek 277 (292)
.|=+|..+...|++++|..+|++|- .+.... .+ ....|.+++-.+-+.+-++.++.-.+.
T Consensus 843 ~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~l 922 (950)
T 4gq2_M 843 VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLL 922 (950)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 4678999999999999999999876 332110 00 122467788889999999999999999
Q ss_pred HHHh
Q 022783 278 ALLA 281 (292)
Q Consensus 278 AIel 281 (292)
||+.
T Consensus 923 AI~~ 926 (950)
T 4gq2_M 923 ADAS 926 (950)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 9975
No 494
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=27.41 E-value=1.6e+02 Score=28.40 Aligned_cols=38 Identities=24% Similarity=0.352 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHH------hcCCHHHHHHHHHHHHHhCcc---Chhhh
Q 022783 252 SVASYNVACCYS------KLNQVKAGLSALEDALLAGYE---DFKVI 289 (292)
Q Consensus 252 a~a~YN~Accya------kLgq~eeALe~LekAIelG~~---Df~~I 289 (292)
..++-=+|.+|. ..++|++|++.++++|+.||. +|..+
T Consensus 188 ~aA~allarvyL~~~~y~~~~~~~~A~~~a~~vi~~~y~L~~~y~~~ 234 (499)
T 3jys_A 188 AVASALLARMYLNAEIYTGKARYTECINACNEVIKAGYQLADNYADL 234 (499)
T ss_dssp HHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHHTTCCCCSCTGGG
T ss_pred HHHHHHHHHHHHhhhhccChhHHHHHHHHHHHHHhcCCccchhHHHH
Confidence 345555666555 578999999999999998765 45443
No 495
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=26.59 E-value=2.4e+02 Score=25.10 Aligned_cols=56 Identities=11% Similarity=0.026 Sum_probs=40.7
Q ss_pred HHcCCHHHHHHHHHHHHc-----CCCCccchhHHHHHHHHHH-HhcCCHHHHHHHHHHHHHh
Q 022783 226 YRTGKYEVAREKFESVLG-----SKPTPEESSVASYNVACCY-SKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 226 ~k~gdYeeAIe~fekALe-----ldP~~~d~a~a~YN~Accy-akLgq~eeALe~LekAIel 281 (292)
+..|+-+.|...|+.|++ +.|..+-.--+.-|-+.+| --+++.++|+...++|++.
T Consensus 136 ~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 136 FGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 455667899999999984 5565544433556666664 4678999999999999653
No 496
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=25.90 E-value=1.2e+02 Score=29.02 Aligned_cols=31 Identities=10% Similarity=-0.081 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 022783 251 SSVASYNVACCYSKLNQVKAGLSALEDALLA 281 (292)
Q Consensus 251 ~a~a~YN~AccyakLgq~eeALe~LekAIel 281 (292)
...++-=+|.+|..+++|++|++.++++|+.
T Consensus 202 k~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 202 NEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 3567888999999999999999999999986
No 497
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=25.80 E-value=75 Score=30.42 Aligned_cols=31 Identities=13% Similarity=0.051 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 022783 252 SVASYNVACCYSKLNQVKAGLSALEDALLAG 282 (292)
Q Consensus 252 a~a~YN~AccyakLgq~eeALe~LekAIelG 282 (292)
..++-=+|.+|..+++|++|++.+++.|+.|
T Consensus 180 ~aA~allarvyL~~~~~~~A~~~a~~vi~~~ 210 (481)
T 3jq1_A 180 GAAYAALGKIYVYEENWQEAINVLEPLTQNP 210 (481)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHGGGGSTT
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhCC
Confidence 5577889999999999999999999999865
No 498
>3m7a_A Uncharacterized protein; structural genomics, unknown function, joint center for structural genomics, JCSG; HET: MSE; 1.22A {Novosphingobium aromaticivorans}
Probab=25.49 E-value=20 Score=29.70 Aligned_cols=24 Identities=33% Similarity=0.376 Sum_probs=18.1
Q ss_pred CeEEEEeCCCCCcccccCcccCCEEE
Q 022783 106 GTYIDAIAPGGSADKTGMFQVGDKVL 131 (292)
Q Consensus 106 ~v~V~~v~~ggnA~k~g~i~vGD~l~ 131 (292)
--||-|+.. |.+++.| |++||+|.
T Consensus 116 a~~VLEl~a-G~~~~~g-i~~Gd~v~ 139 (140)
T 3m7a_A 116 TLAVLEING-GLAARLG-IKPGDKVE 139 (140)
T ss_dssp CSEEEEEET-THHHHHT-CCTTCEEE
T ss_pred ccEEEEeCc-ChHHHcC-CCCCCEEe
Confidence 467888765 4566777 99999985
No 499
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=25.00 E-value=3.2e+02 Score=24.18 Aligned_cols=74 Identities=18% Similarity=0.215 Sum_probs=50.7
Q ss_pred cceEEEEecCCceeEEeeeCCCCeEEEEeCCCCCcccccCcccCCEEEEeccc--cCcccccccchhhHHHHhh-ccCCc
Q 022783 84 YEEYEVEIEQPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAV--FGTEIWPAAEYGRTMYTIR-QRVGP 160 (292)
Q Consensus 84 ~~~~~v~l~KPlGl~~~~~~~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~--fg~e~w~a~~~g~~~~ai~-~r~g~ 160 (292)
..+.+-|-.-||.+.+.. .|..+.|+.-. +.| |.+|.++.++-+. =|..|=+.+ .++..|- ..+.|
T Consensus 25 ~~~~~~~~~~p~~~~~~~-~~~~~~v~~~~------~d~-~~~~~~~~~~ng~~~~~~~~~d~~---~v~~~iigk~N~P 93 (219)
T 2j3t_D 25 RAEAEKTFSYPLDLLLKL-HDERVLVAFGQ------RDG-IRVGHAVLAINGMDVNGRYTADGK---EVLEYLGNPANYP 93 (219)
T ss_dssp --CEEEEECSSCSSEEEE-CSSSEEEEECC------CTT-CCTTCEEEEETTEECBTTBCTTSS---BHHHHTTCGGGCS
T ss_pred CcceeeeccCCcceeeee-ccceeEEeecc------cCC-ccccceeeecCCccCCCcccccCc---eeeeeeecCCCCc
Confidence 345677888999999988 47788886643 566 9999999998652 343232222 4566554 66899
Q ss_pred eEEEEeec
Q 022783 161 LLMKMQKR 168 (292)
Q Consensus 161 v~l~l~r~ 168 (292)
++++.-.+
T Consensus 94 Lyir~f~~ 101 (219)
T 2j3t_D 94 VSIRFGRP 101 (219)
T ss_dssp EEEEEECC
T ss_pred eEEEecCC
Confidence 99988764
No 500
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=24.76 E-value=1e+02 Score=27.52 Aligned_cols=78 Identities=18% Similarity=0.213 Sum_probs=45.0
Q ss_pred EEEEecC---CceeEEeeeC-CCCeEEEEeCCCCCcccccCcccCCEEEEeccccCcccccc-cchhhHHHHhhccCCce
Q 022783 87 YEVEIEQ---PYGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPA-AEYGRTMYTIRQRVGPL 161 (292)
Q Consensus 87 ~~v~l~K---PlGl~~~~~~-~G~v~V~~v~~ggnA~k~g~i~vGD~l~~~Sa~fg~e~w~a-~~~g~~~~ai~~r~g~v 161 (292)
+-|.+.+ =.||.-..+. .|.+.+..|... + .|++||+|+ ||. +|. +.|. --+|.|.+.-....+..
T Consensus 135 v~v~v~~s~~~~Gil~G~~~~~~~l~l~~i~~~--~----~i~~GD~Vv-TSG-l~g-ifP~GipVG~V~~V~~~~~~~~ 205 (255)
T 2j5u_A 135 VSAKVQGKENAFGIINGYDSDTKLLELKQLPYD--M----KFKKGQKVV-TSG-LGG-KFPAGIFIGTIEKVETDKMGLS 205 (255)
T ss_dssp EEEEECSSSCEEEEEEEEETTTTEEEEEEEETT--S----CCCTTCEEE-ECC-TTS-SSCTTCEEEEEEEEEECTTSSE
T ss_pred EEEEEecCCcEEEEEEccCCCCCcEEEEECCCC--C----CCCCCCEEE-ECC-CCC-cCCCCCEEEEEEEEeeCCCCce
Confidence 5566653 3477654443 256777777632 2 399999987 554 332 4444 34555555544445555
Q ss_pred EEEEeeccCCcc
Q 022783 162 LMKMQKRYGKME 173 (292)
Q Consensus 162 ~l~l~r~~~~~~ 173 (292)
.-..-+++.+|.
T Consensus 206 ~~i~v~P~ad~~ 217 (255)
T 2j5u_A 206 QTAFIKPGADMY 217 (255)
T ss_dssp EEEEEEESSCCS
T ss_pred EEEEEEECCCcc
Confidence 555566666653
Done!