BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 022784
         (292 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P57523|DHAS_BUCAI Aspartate-semialdehyde dehydrogenase OS=Buchnera aphidicola subsp.
           Acyrthosiphon pisum (strain APS) GN=asd PE=3 SV=1
          Length = 371

 Score = 32.3 bits (72), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 26/46 (56%)

Query: 105 DGVCIEIKKLGRNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPN 150
           DG C+ I  L  +S+    K++ D SL+ +  I+ ++ K  D +PN
Sbjct: 264 DGTCVRIGSLRCHSQSFVIKLKKDVSLEDIEEIIRNHNKWVDVIPN 309


>sp|Q9SKH2|Y2369_ARATH BTB/POZ domain-containing protein At2g13690 OS=Arabidopsis thaliana
           GN=PRL1-IFG PE=2 SV=2
          Length = 544

 Score = 31.6 bits (70), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 174 LAFGIKFNAKGVLDCYEKDLEIFPSGKKRDIEFKMIEGDFQLFEGKWS--IEQFNGGKFE 231
           +A GIKF ++ VL C  K LE  P  +  + + + + G +   +   S  + +FN  + E
Sbjct: 241 VAAGIKF-SRAVLSCL-KYLEAVPWTEDEEEKLRRLLGIYSFDDDAVSEILARFNSNETE 298

Query: 232 DSESLLSQKFQTTLSYSVDVRPKLWLPVRLVEGRLC 267
           + +  LS+K   +++   DV P+  L   LV+G LC
Sbjct: 299 NLQDSLSKKLVWSITSCSDVNPRNELK-SLVKGLLC 333


>sp|P38157|MAL33_YEAST Maltose fermentation regulatory protein MAL33 OS=Saccharomyces
           cerevisiae (strain ATCC 204508 / S288c) GN=MAL33 PE=3
           SV=1
          Length = 468

 Score = 31.2 bits (69), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 6/85 (7%)

Query: 63  FKRNGTSYCSNTNSSELDIEEEDD--DDVLSEEGSGSQTQSLHGDGVCIEIKKLGRNSRR 120
           F+ NGT + SN N++ + +E   D  DD+     + +    +HG G+ ++  ++      
Sbjct: 343 FQMNGTKFFSNANNAHILVEIAKDMLDDIFL---TPNNLYDVHGPGIPMKSLEVANALVD 399

Query: 121 IRSKIEIDASLDTVWHILTDYEKLA 145
           I +K + +  L+  W+IL D  K  
Sbjct: 400 IVNKYDHNMKLEA-WNILCDVSKFV 423


>sp|Q80X50|UBP2L_MOUSE Ubiquitin-associated protein 2-like OS=Mus musculus GN=Ubap2l PE=1
           SV=1
          Length = 1107

 Score = 31.2 bits (69), Expect = 8.3,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 38/80 (47%)

Query: 24  ATTATSHSTSRFPFTSTRSSIQKTPHSILSVSPEFNLSQFKRNGTSYCSNTNSSELDIEE 83
           +TT TS + ++ P    RS+  +   S +S SP+ +L+Q K   +S  +    +   +E 
Sbjct: 598 STTYTSQNNAQGPLYEQRSTQTRRYPSSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEG 657

Query: 84  EDDDDVLSEEGSGSQTQSLH 103
                V SE  S S   SL+
Sbjct: 658 ATGSAVKSESPSTSSIPSLN 677


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.133    0.383 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,118,681
Number of Sequences: 539616
Number of extensions: 4497524
Number of successful extensions: 15540
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 15121
Number of HSP's gapped (non-prelim): 426
length of query: 292
length of database: 191,569,459
effective HSP length: 116
effective length of query: 176
effective length of database: 128,974,003
effective search space: 22699424528
effective search space used: 22699424528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)