Your job contains 1 sequence.
>022785
MASSGGGRFMAYSLSPSAPHSPHLPSLRSASSAILDQEKYLSELLAERHKLNPFLPVLPN
AYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGL
MQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTEC
RVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLL
KPVDESHDFYKKQQLRELALLNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022785
(292 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2161845 - symbol:AT5G56140 "AT5G56140" species... 1086 6.1e-110 1
UNIPROTKB|Q75GR5 - symbol:SPIN1 "KH domain-containing pro... 714 1.6e-70 1
TAIR|locus:2077818 - symbol:AT3G08620 "AT3G08620" species... 702 3.0e-69 1
TAIR|locus:2064097 - symbol:AT2G38610 "AT2G38610" species... 694 2.1e-68 1
TAIR|locus:2024326 - symbol:AT1G09660 "AT1G09660" species... 657 1.8e-64 1
UNIPROTKB|G5EFF1 - symbol:asd-2 "Protein ASD-2, isoform c... 317 4.9e-33 2
ZFIN|ZDB-GENE-990415-230 - symbol:qkia "QKI, KH domain co... 321 6.7e-33 2
FB|FBgn0264491 - symbol:how "held out wings" species:7227... 307 7.9e-33 2
ZFIN|ZDB-GENE-040426-1462 - symbol:qki2 "QKI, KH domain c... 329 1.0e-32 2
WB|WBGene00006423 - symbol:asd-2 species:6239 "Caenorhabd... 317 1.4e-32 2
WB|WBGene00001595 - symbol:gld-1 species:6239 "Caenorhabd... 302 2.8e-31 2
ZFIN|ZDB-GENE-081028-54 - symbol:qkib "QKI, KH domain con... 337 1.4e-30 1
UNIPROTKB|Q5W9D7 - symbol:QKI "Protein quaking" species:9... 335 2.3e-30 1
UNIPROTKB|Q9GMY1 - symbol:QKI "Protein quaking" species:9... 335 2.3e-30 1
UNIPROTKB|Q96PU8 - symbol:QKI "Protein quaking" species:9... 335 2.3e-30 1
UNIPROTKB|Q5W9D5 - symbol:QKI "Protein quaking" species:9... 335 2.3e-30 1
MGI|MGI:97837 - symbol:Qk "quaking" species:10090 "Mus mu... 335 2.3e-30 1
RGD|1584886 - symbol:Qk "quaking" species:10116 "Rattus n... 335 2.3e-30 1
UNIPROTKB|D4A2X0 - symbol:Qk "Protein Qk" species:10116 "... 335 2.3e-30 1
UNIPROTKB|F1LMH5 - symbol:Qk "Protein Qk" species:10116 "... 335 2.3e-30 1
UNIPROTKB|F1NWU9 - symbol:QKI "Protein quaking" species:9... 334 3.0e-30 1
UNIPROTKB|F1NWV0 - symbol:QKI "Protein quaking" species:9... 334 3.0e-30 1
UNIPROTKB|Q9YH18 - symbol:QKI "Protein quaking" species:9... 334 3.0e-30 1
UNIPROTKB|F1N7N1 - symbol:QKI "Protein quaking" species:9... 334 3.0e-30 1
UNIPROTKB|F1PLY2 - symbol:QKI "Protein quaking" species:9... 334 3.0e-30 1
UNIPROTKB|F1PX61 - symbol:QKI "Protein quaking" species:9... 334 3.0e-30 1
UNIPROTKB|F1SBW4 - symbol:QKI "Protein quaking" species:9... 334 3.0e-30 1
UNIPROTKB|J9NVZ6 - symbol:QKI "Protein quaking" species:9... 333 3.8e-30 1
UNIPROTKB|F5GXS8 - symbol:QKI "Protein quaking" species:9... 333 3.8e-30 1
UNIPROTKB|F5GYM3 - symbol:QKI "Protein quaking" species:9... 333 3.8e-30 1
UNIPROTKB|E1BP48 - symbol:KHDRBS2 "Uncharacterized protei... 273 1.4e-29 2
UNIPROTKB|E1BVW8 - symbol:KHDRBS2 "Uncharacterized protei... 273 1.8e-29 2
UNIPROTKB|E2QWN2 - symbol:KHDRBS2 "Uncharacterized protei... 273 2.9e-29 2
UNIPROTKB|Q5VWX1 - symbol:KHDRBS2 "KH domain-containing, ... 273 2.9e-29 2
UNIPROTKB|F1RZV6 - symbol:KHDRBS2 "Uncharacterized protei... 273 2.9e-29 2
RGD|621738 - symbol:Khdrbs2 "KH domain containing, RNA bi... 275 3.7e-29 2
MGI|MGI:2159649 - symbol:Khdrbs2 "KH domain containing, R... 271 9.6e-29 2
ZFIN|ZDB-GENE-061013-497 - symbol:khdrbs2 "KH domain cont... 266 3.2e-28 2
UNIPROTKB|A4FV24 - symbol:KHDRBS3 "Uncharacterized protei... 256 4.1e-28 2
UNIPROTKB|E2RLG8 - symbol:KHDRBS3 "Uncharacterized protei... 256 4.1e-28 2
UNIPROTKB|O75525 - symbol:KHDRBS3 "KH domain-containing, ... 256 4.1e-28 2
MGI|MGI:1313312 - symbol:Khdrbs3 "KH domain containing, R... 257 8.4e-28 2
RGD|620921 - symbol:Khdrbs3 "KH domain containing, RNA bi... 257 8.4e-28 2
UNIPROTKB|E1C4N4 - symbol:KHDRBS1 "KH domain-containing, ... 245 1.7e-25 2
ZFIN|ZDB-GENE-040426-2344 - symbol:khdrbs1b "KH domain co... 241 3.5e-25 2
UNIPROTKB|F1NLF2 - symbol:KHDRBS1 "KH domain-containing, ... 245 1.5e-24 2
UNIPROTKB|Q8UUW7 - symbol:KHDRBS1 "KH domain-containing, ... 245 2.4e-24 2
UNIPROTKB|J9NRH2 - symbol:KHDRBS1 "Uncharacterized protei... 242 3.4e-24 2
UNIPROTKB|Q29RQ2 - symbol:KHDRBS1 "Uncharacterized protei... 242 5.0e-24 2
UNIPROTKB|Q07666 - symbol:KHDRBS1 "KH domain-containing, ... 242 5.0e-24 2
UNIPROTKB|I3LP11 - symbol:LOC100739434 "Uncharacterized p... 242 5.0e-24 2
UNIPROTKB|F1PLD5 - symbol:KHDRBS1 "Uncharacterized protei... 242 5.1e-24 2
MGI|MGI:893579 - symbol:Khdrbs1 "KH domain containing, RN... 237 1.9e-23 2
RGD|621459 - symbol:Khdrbs1 "KH domain containing, RNA bi... 237 1.9e-23 2
UNIPROTKB|F1P522 - symbol:QKI "Protein quaking" species:9... 268 2.9e-23 1
FB|FBgn0034739 - symbol:CG3927 species:7227 "Drosophila m... 240 3.4e-23 2
FB|FBgn0022987 - symbol:qkr54B "quaking related 54B" spec... 240 3.5e-23 2
FB|FBgn0022985 - symbol:qkr58E-2 "quaking related 58E-2" ... 227 4.3e-22 2
UNIPROTKB|E5RJZ9 - symbol:KHDRBS3 "KH domain-containing, ... 256 5.5e-22 1
UNIPROTKB|F1RRV9 - symbol:KHDRBS3 "Uncharacterized protei... 256 5.5e-22 1
FB|FBgn0034740 - symbol:nsr "novel spermatogenesis regula... 233 6.0e-22 2
UNIPROTKB|E5RG12 - symbol:KHDRBS3 "KH domain-containing, ... 255 7.0e-22 1
UNIPROTKB|I3LAN7 - symbol:LOC100625959 "Uncharacterized p... 255 7.0e-22 1
ZFIN|ZDB-GENE-000210-25 - symbol:khdrbs1a "KH domain cont... 219 8.5e-22 2
TAIR|locus:2176222 - symbol:AT5G51300 species:3702 "Arabi... 262 1.7e-21 1
UNIPROTKB|F1NKE9 - symbol:KHDRBS3 "Uncharacterized protei... 251 1.9e-21 1
FB|FBgn0022984 - symbol:qkr58E-3 "quaking related 58E-3" ... 228 2.0e-21 2
UNIPROTKB|F5H8C8 - symbol:QKI "Protein quaking" species:9... 249 3.0e-21 1
FB|FBgn0034659 - symbol:CG4021 species:7227 "Drosophila m... 220 1.4e-20 2
RGD|620645 - symbol:Sf1 "splicing factor 1" species:10116... 238 4.4e-20 1
CGD|CAL0004717 - symbol:orf19.329 species:5476 "Candida a... 239 1.4e-19 1
UNIPROTKB|B4DX42 - symbol:SF1 "Splicing factor 1" species... 238 1.5e-19 1
FB|FBgn0034731 - symbol:CG10384 species:7227 "Drosophila ... 238 2.0e-19 1
WB|WBGene00022101 - symbol:Y69A2AR.32 species:6239 "Caeno... 234 2.3e-19 1
WB|WBGene00019509 - symbol:K07H8.9 species:6239 "Caenorha... 231 2.5e-19 1
UNIPROTKB|F1LM37 - symbol:Sf1 "Protein Sf1" species:10116... 238 3.0e-19 1
UNIPROTKB|E2RRT4 - symbol:SF1 "Uncharacterized protein" s... 238 4.2e-19 1
UNIPROTKB|A2VDM7 - symbol:SF1 "Uncharacterized protein" s... 238 4.2e-19 1
UNIPROTKB|Q15637 - symbol:SF1 "Splicing factor 1" species... 238 4.2e-19 1
UNIPROTKB|F1RQR0 - symbol:SF1 "Uncharacterized protein" s... 238 4.2e-19 1
MGI|MGI:1095403 - symbol:Sf1 "splicing factor 1" species:... 238 4.4e-19 1
UNIPROTKB|F1LSC3 - symbol:Sf1 "Protein Sf1" species:10116... 238 4.4e-19 1
WB|WBGene00044674 - symbol:B0280.17 species:6239 "Caenorh... 228 5.1e-19 1
DICTYBASE|DDB_G0293554 - symbol:sf1 "CCHC-type zinc finge... 233 8.3e-19 1
SGD|S000004106 - symbol:MSL5 "Component of the commitment... 231 1.2e-18 1
ZFIN|ZDB-GENE-030131-2492 - symbol:sf1 "splicing factor 1... 234 1.2e-18 1
FB|FBgn0025571 - symbol:SF1 "Splicing factor 1" species:7... 229 5.7e-18 1
UNIPROTKB|K7GNY3 - symbol:KHDRBS3 "Uncharacterized protei... 215 1.2e-17 1
WB|WBGene00013808 - symbol:sfa-1 species:6239 "Caenorhabd... 224 1.6e-17 1
ASPGD|ASPL0000074583 - symbol:AN10615 species:162425 "Eme... 210 3.3e-16 1
FB|FBgn0022986 - symbol:qkr58E-1 "quaking related 58E-1" ... 204 6.4e-16 1
POMBASE|SPCC962.06c - symbol:bpb1 "zinc finger splicing f... 204 1.7e-15 1
UNIPROTKB|H0YAQ3 - symbol:KHDRBS3 "KH domain-containing, ... 193 2.6e-15 1
WB|WBGene00013325 - symbol:Y57G11C.36 species:6239 "Caeno... 198 5.1e-15 1
GENEDB_PFALCIPARUM|PFF1135w - symbol:PFF1135w "transcript... 187 2.1e-12 1
UNIPROTKB|C6KT72 - symbol:PFF1135w "Transcription or spli... 187 2.1e-12 1
UNIPROTKB|H0YAQ1 - symbol:KHDRBS3 "KH domain-containing, ... 141 6.0e-09 1
>TAIR|locus:2161845 [details] [associations]
symbol:AT5G56140 "AT5G56140" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR004087 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003723 EMBL:AB011476
eggNOG:COG5176 KO:K14945 HSSP:Q32NN2 EMBL:AY080852 EMBL:BT000873
IPI:IPI00544767 RefSeq:NP_200425.1 UniGene:At.29404
ProteinModelPortal:Q9FKT4 SMR:Q9FKT4 PRIDE:Q9FKT4
EnsemblPlants:AT5G56140.1 GeneID:835713 KEGG:ath:AT5G56140
TAIR:At5g56140 HOGENOM:HOG000238548 InParanoid:Q9FKT4 OMA:AKRTIRV
PhylomeDB:Q9FKT4 ProtClustDB:CLSN2916672 Genevestigator:Q9FKT4
Uniprot:Q9FKT4
Length = 315
Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
Identities = 220/296 (74%), Positives = 240/296 (81%)
Query: 1 MASSGGGRFMAYXXXXXXXXXX-----XXXXXXXXXXXILDQEKYLSELLAERHKLNPFL 55
+ GGGRFM Y ++QEKYLSELLAERHKL PFL
Sbjct: 21 IGGGGGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFL 80
Query: 56 PVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQS 115
PVLP+A+RLLNQEI+RVTTLL NA+VL QSGL+H SPL SGGIF N AD NG AS+F S
Sbjct: 81 PVLPHAFRLLNQEILRVTTLLENATVLSQSGLDHPSPLASGGIFQNARADMNGWASQFPS 140
Query: 116 EISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVE 175
E S + SS NWL+S GSSSGLI KRTIRVDIPV+ YPNFNFVGRLLGPRGNSLKRVE
Sbjct: 141 ERS--VPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVE 198
Query: 176 ASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREI 235
AST+CRVLIRGRGSIKDP +EEMMRGKPGYEHLNEPLHILVEAELP+EIVDARLMQAREI
Sbjct: 199 ASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREI 258
Query: 236 LEDLLKPVDESHDFYKKQQLRELALLNGTLREEGSPMSGSVSPFHNSLGMKRAKTR 291
L+DLL P++E+HD YKKQQLRELALLNGTLREEGSPMSGSVSP+ NSLGMKRAKTR
Sbjct: 259 LDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPY-NSLGMKRAKTR 313
>UNIPROTKB|Q75GR5 [details] [associations]
symbol:SPIN1 "KH domain-containing protein SPIN1"
species:39947 "Oryza sativa Japonica Group" [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0048577 "negative regulation of short-day
photoperiodism, flowering" evidence=IMP] [GO:0048579 "negative
regulation of long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 GO:GO:0003723 GO:GO:0009908 GO:GO:0048577 HSSP:Q9BW01
eggNOG:COG5176 EMBL:CM000140 GO:GO:0048579 KO:K14945 OMA:IMRVSSI
EMBL:AC139172 EMBL:AK065405 RefSeq:NP_001051685.1 UniGene:Os.5675
ProteinModelPortal:Q75GR5 EnsemblPlants:LOC_Os03g60110.1
GeneID:4334557 KEGG:dosa:Os01t0886300-01 KEGG:dosa:Os03t0815700-01
KEGG:osa:4334557 Gramene:Q75GR5 ProtClustDB:CLSN2694450
Uniprot:Q75GR5
Length = 281
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 147/256 (57%), Positives = 186/256 (72%)
Query: 39 KYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASV--LGQSGLEHASPLTSG 96
+YL+ELLAE KL PF+ VLP +LL+QEIMRV++++ N + SP++S
Sbjct: 29 QYLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNHGFGDFDRHRFRSPSPMSSP 88
Query: 97 GIFSNGGADTNGLA--SRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKY 154
SN NG + + E G Q +S +W + S S +VK+ +R+D+PV+ Y
Sbjct: 89 NPRSNRSG--NGFSPWNGLHQERLGFPQGTS-MDWQGAPPSPSSHVVKKILRLDVPVDSY 145
Query: 155 PNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHI 214
PNFNFVGR+LGPRGNSLKRVEAST CRV IRG+GSIKDP +E+ +RGKPGYEHL++PLHI
Sbjct: 146 PNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGKEDKLRGKPGYEHLSDPLHI 205
Query: 215 LVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLREEGSPMSG 274
L+EAE P I+DARL A+E++E+LLKPVDES DFYK+QQLRELA+LN TLRE+ SP G
Sbjct: 206 LIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKRQQLRELAMLNSTLRED-SPHPG 264
Query: 275 SVSPFHNSLGMKRAKT 290
SVSPF N GMKRAKT
Sbjct: 265 SVSPFSNG-GMKRAKT 279
>TAIR|locus:2077818 [details] [associations]
symbol:AT3G08620 "AT3G08620" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0010048 "vernalization response" evidence=RCA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC012562 eggNOG:COG5176 KO:K14945 HSSP:Q32NN2
HOGENOM:HOG000238548 ProtClustDB:CLSN2683215 EMBL:AK117438
IPI:IPI00536963 RefSeq:NP_187474.2 UniGene:At.40250
ProteinModelPortal:Q8GYR4 SMR:Q8GYR4 PaxDb:Q8GYR4 PRIDE:Q8GYR4
EnsemblPlants:AT3G08620.1 GeneID:820009 KEGG:ath:AT3G08620
TAIR:At3g08620 InParanoid:Q9C9Z4 OMA:IFRITGM PhylomeDB:Q8GYR4
Genevestigator:Q8GYR4 Uniprot:Q8GYR4
Length = 283
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 146/255 (57%), Positives = 176/255 (69%)
Query: 39 KYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASP--LTSG 96
+Y+S+LLAE KL PF+ VLP RLLNQEI R+T ++ N L H SP + S
Sbjct: 30 QYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASP 89
Query: 97 GIFSN-GGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYP 155
+ SN G G I G A W + S S VKR +R+D+PV+ YP
Sbjct: 90 NLMSNVSGGGLGGWNGLPPERIGG--PHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYP 147
Query: 156 NFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHIL 215
NFNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +EE ++GKPGYEHLNE LHIL
Sbjct: 148 NFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHIL 207
Query: 216 VEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLREEGSPMSGS 275
+EA+LP++IVD +L QA+EI+E+L+KPVDES D+ K+QQLRELALLN LRE SGS
Sbjct: 208 IEADLPIDIVDIKLRQAQEIIEELVKPVDESQDYIKRQQLRELALLNSNLRENSPGPSGS 267
Query: 276 VSPFHNSLGMKRAKT 290
VSPF NS MKR KT
Sbjct: 268 VSPF-NSNAMKRPKT 281
>TAIR|locus:2064097 [details] [associations]
symbol:AT2G38610 "AT2G38610" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC005499 eggNOG:COG5176 KO:K14945 HSSP:Q32NN2
HOGENOM:HOG000238548 EMBL:AY042804 EMBL:AY064682 EMBL:AY065112
EMBL:BT000084 IPI:IPI00520364 PIR:B84807 RefSeq:NP_181395.1
RefSeq:NP_850296.1 UniGene:At.23456 ProteinModelPortal:Q9ZVI3
SMR:Q9ZVI3 IntAct:Q9ZVI3 PaxDb:Q9ZVI3 PRIDE:Q9ZVI3
EnsemblPlants:AT2G38610.1 EnsemblPlants:AT2G38610.2 GeneID:818443
KEGG:ath:AT2G38610 TAIR:At2g38610 InParanoid:Q9ZVI3 OMA:IMRVSSI
PhylomeDB:Q9ZVI3 ProtClustDB:CLSN2683215 Genevestigator:Q9ZVI3
Uniprot:Q9ZVI3
Length = 286
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 152/265 (57%), Positives = 183/265 (69%)
Query: 35 LDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASP-- 92
+D +YL+ELLAE KL PF+ VLP RLLNQE+ RV+ ++ N L H SP
Sbjct: 27 IDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVSGMMSNQGFGDFDRLRHRSPSP 86
Query: 93 LTSGGIFSN----GGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVD 148
+ S + SN G NGL+ Q +SG +W + GS S VKR +R++
Sbjct: 87 MASSNLMSNVSNTGLGGWNGLS---QERLSGT--PGMTMDWQGAPGSPSSYTVKRILRLE 141
Query: 149 IPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHL 208
IPV+ YPNFNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +E+ +RG+PGYEHL
Sbjct: 142 IPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEHL 201
Query: 209 NEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGT-LRE 267
NE LHIL+EA+LP IV+ RL QA+EI+E+LLKPVDES DF K+QQLRELALLN LRE
Sbjct: 202 NEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQQLRELALLNSNNLRE 261
Query: 268 E--GSPMSGSVSPFHNSLGMKRAKT 290
E G GSVSPF NS G KR KT
Sbjct: 262 ESPGPSGGGSVSPF-NSSG-KRPKT 284
>TAIR|locus:2024326 [details] [associations]
symbol:AT1G09660 "AT1G09660" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR004087 PROSITE:PS50084 SMART:SM00322 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003723
eggNOG:COG5176 EMBL:AC000132 KO:K14945 HSSP:Q32NN2
HOGENOM:HOG000238548 EMBL:AK118683 EMBL:AF419590 EMBL:AY079111
EMBL:BX842524 EMBL:AK175370 EMBL:AK175796 EMBL:AK176267
EMBL:AK176765 EMBL:AK176899 IPI:IPI00517028 IPI:IPI00535968
PIR:D86230 PIR:E86230 RefSeq:NP_172437.2 RefSeq:NP_973800.1
UniGene:At.10221 ProteinModelPortal:Q8GWR3 SMR:Q8GWR3 IntAct:Q8GWR3
EnsemblPlants:AT1G09660.1 GeneID:837494 KEGG:ath:AT1G09660
TAIR:At1g09660 InParanoid:Q8GWR3 OMA:VEASTQC PhylomeDB:Q8GWR3
ProtClustDB:CLSN2690390 Genevestigator:Q8GWR3 Uniprot:Q8GWR3
Length = 298
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 141/262 (53%), Positives = 177/262 (67%)
Query: 36 DQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLTS 95
D+E+YL+ELL ER KL PFL V+PN RLLN EI RV+ S EH SP S
Sbjct: 41 DRERYLTELLQERQKLGPFLQVMPNCCRLLNHEIRRVS------SFPDLDRYEHGSPFRS 94
Query: 96 GGIFSNGGADTNGLASRFQSEISGLMQSS-----SAQNWLSSQGSSSGLIVKRTIRVDIP 150
G +NG D G + E L ++S S W+ G + IVK+ IR+D+P
Sbjct: 95 LGQPTNGKLDLEGWSMMQAEENCHLQRASPFRGPSPVGWIGMPGLPNPPIVKKVIRLDVP 154
Query: 151 VEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNE 210
V+KYP++NFVGR+LGPRGNSLKRVE +T CRV IRGRGS+KD +EE ++GKPGYEHL E
Sbjct: 155 VDKYPSYNFVGRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCE 214
Query: 211 PLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLREEG- 269
PLH+L+EAELP +I+++RL A LE LLKP+DES D YK++QL+ELA LNGTLREE
Sbjct: 215 PLHVLIEAELPEDIINSRLEHAVHFLESLLKPMDESMDHYKREQLKELAALNGTLREESP 274
Query: 270 SP-MSGSVSPFHNSLGMKRAKT 290
SP +S +SP + KRAKT
Sbjct: 275 SPSLSPCLSPSMSPFNSKRAKT 296
>UNIPROTKB|G5EFF1 [details] [associations]
symbol:asd-2 "Protein ASD-2, isoform c" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0007411 GO:GO:0002119 GO:GO:0003727
GO:GO:0040017 GO:GO:0007413 GO:GO:0097157
GeneTree:ENSGT00550000074434 GO:GO:0000381 GO:GO:0043186
EMBL:FO080897 UniGene:Cel.16725 GeneID:188703 KEGG:cel:CELE_T21G5.5
CTD:188703 EMBL:EF630626 RefSeq:NP_001021627.1 SMR:G5EFF1
IntAct:G5EFF1 EnsemblMetazoa:T21G5.5c WormBase:T21G5.5c
NextBio:939786 Uniprot:G5EFF1
Length = 445
Score = 317 (116.6 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 59/130 (45%), Positives = 91/130 (70%)
Query: 144 TIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKP 203
T +V +P +++P++NFVGR+LGPRG + K++E T C++++RGRGS++D +EE+ RGKP
Sbjct: 131 TEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEELNRGKP 190
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
+EHL+E LH+L++ E +LM+A E + LL P E D K++QL ELA++NG
Sbjct: 191 NWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLLVPAPEGEDDLKRKQLMELAIING 250
Query: 264 TLREEGSPMS 273
T R G+ S
Sbjct: 251 TYRS-GTDQS 259
Score = 59 (25.8 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 39 KYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLL 76
+YLS+LL ++ +L F V + RL ++EI +V +L
Sbjct: 71 EYLSQLLKDKKQLAAFPNVFHHLERLADEEINKVRVVL 108
>ZFIN|ZDB-GENE-990415-230 [details] [associations]
symbol:qkia "QKI, KH domain containing, RNA binding
a" species:7955 "Danio rerio" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=IMP] [GO:0007519 "skeletal muscle tissue
development" evidence=IMP] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IGI] [GO:0017124 "SH3 domain binding"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
ZFIN:ZDB-GENE-990415-230 GO:GO:0003723 GeneTree:ENSGT00550000074434
GO:GO:0008589 GO:GO:0007519 GO:GO:0070935 EMBL:BX936408
EMBL:BX936463 IPI:IPI00993157 Ensembl:ENSDART00000125640
ArrayExpress:F1R190 Bgee:F1R190 Uniprot:F1R190
Length = 486
Score = 321 (118.1 bits), Expect = 6.7e-33, Sum P(2) = 6.7e-33
Identities = 61/130 (46%), Positives = 90/130 (69%)
Query: 138 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREE 197
G IV ++ +PV++YP++NFVGR+LGPRG + K++EA T C++++RGR S++D +EE
Sbjct: 181 GPIVHLQEKLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGCKIMVRGRSSMRDKKKEE 240
Query: 198 MMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRE 257
RGKP +EHLNE LH+L+ E + ++ +A E ++ LL P E D KK QL E
Sbjct: 241 QNRGKPNWEHLNEDLHVLITVEDTQTRAEIKMRRAVEEVKKLLVPAAEGEDNLKKMQLME 300
Query: 258 LALLNGTLRE 267
LA+LNGT R+
Sbjct: 301 LAILNGTYRD 310
Score = 57 (25.1 bits), Expect = 6.7e-33, Sum P(2) = 6.7e-33
Identities = 24/58 (41%), Positives = 31/58 (53%)
Query: 40 YLSELLAERHKLNPFLPVLPNAY----RLLNQEIMRVTTLLGNASVLGQSGLEHASPL 93
YL +LL E+ KL LP L + RLL++EI RV + N SV +GL PL
Sbjct: 121 YLMQLLNEK-KLMTSLPNLCGIFTHLERLLDEEINRVRKDMYNDSV---NGLVDKHPL 174
>FB|FBgn0264491 [details] [associations]
symbol:how "held out wings" species:7227 "Drosophila
melanogaster" [GO:0007525 "somatic muscle development"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC;NAS;IDA]
[GO:0008016 "regulation of heart contraction" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0007521
"muscle cell fate determination" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0007475 "apposition of dorsal and ventral
imaginal disc-derived wing surfaces" evidence=IMP] [GO:0003729
"mRNA binding" evidence=NAS;IDA] [GO:0007498 "mesoderm development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
[GO:0008347 "glial cell migration" evidence=IMP] [GO:0008366 "axon
ensheathment" evidence=IMP] [GO:0007438 "oenocyte development"
evidence=IMP] [GO:0003730 "mRNA 3'-UTR binding" evidence=IDA]
[GO:0008078 "mesodermal cell migration" evidence=IMP] [GO:0045214
"sarcomere organization" evidence=IMP] [GO:0007284 "spermatogonial
cell division" evidence=IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 EMBL:AE014297
GO:GO:0005634 GO:GO:0007155 GO:GO:0008016 GO:GO:0007438
GO:GO:0016203 GO:GO:0003730 GO:GO:0045214 GO:GO:0030718
GO:GO:0008078 GO:GO:0008347 GO:GO:0007475 GO:GO:0007284
eggNOG:COG5176 GeneTree:ENSGT00550000074434 GO:GO:0007525
GO:GO:0000381 GO:GO:0008366 EMBL:U85651 EMBL:U72331 EMBL:AF003106
EMBL:AF003107 EMBL:U87150 EMBL:AY069862 RefSeq:NP_001027203.1
RefSeq:NP_001163683.1 RefSeq:NP_001163684.1 RefSeq:NP_524447.2
RefSeq:NP_732695.1 UniGene:Dm.20227 ProteinModelPortal:O01367
SMR:O01367 IntAct:O01367 MINT:MINT-307488 STRING:O01367
PaxDb:O01367 PRIDE:O01367 EnsemblMetazoa:FBtr0084177
EnsemblMetazoa:FBtr0301401 GeneID:42596 KEGG:dme:Dmel_CG10293
CTD:42596 FlyBase:FBgn0017397 InParanoid:O01367 KO:K14945
OMA:SLFQING OrthoDB:EOG4FJ6RD PhylomeDB:O01367 ChiTaRS:how
GenomeRNAi:42596 NextBio:829604 Bgee:O01367 GermOnline:CG10293
GO:GO:0007521 Uniprot:O01367
Length = 405
Score = 307 (113.1 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 57/130 (43%), Positives = 88/130 (67%)
Query: 138 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREE 197
G +V +V +PV ++P+FNFVGR+LGPRG + K++E T C++++RG+GS++D +E+
Sbjct: 132 GSVVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKED 191
Query: 198 MMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRE 257
RGKP +EHL++ LH+L+ E +L QA ++ LL P E D KK+QL E
Sbjct: 192 ANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLME 251
Query: 258 LALLNGTLRE 267
LA++NGT R+
Sbjct: 252 LAIINGTYRD 261
Score = 67 (28.6 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 40 YLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLT 94
YL++LL +R +L F V + RLL++EI RV AS+ +G++ PLT
Sbjct: 78 YLAQLLKDRKQLAAFPNVFTHVERLLDEEIARV-----RASLFQINGVKK-EPLT 126
>ZFIN|ZDB-GENE-040426-1462 [details] [associations]
symbol:qki2 "QKI, KH domain containing, RNA
binding 2" species:7955 "Danio rerio" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0017124 "SH3 domain binding"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
ZFIN:ZDB-GENE-040426-1462 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0030154 GO:GO:0006417 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 GO:GO:0051028 eggNOG:COG5176
GeneTree:ENSGT00550000074434 KO:K14945 EMBL:AB086654 EMBL:BC061709
EMBL:BC065344 IPI:IPI00501345 IPI:IPI00760231 RefSeq:NP_957136.2
UniGene:Dr.133657 ProteinModelPortal:Q6P104 SMR:Q6P104
Ensembl:ENSDART00000027034 GeneID:393815 KEGG:dre:393815 CTD:393815
HOGENOM:HOG000019831 HOVERGEN:HBG093883 OMA:GMAFPTK
OrthoDB:EOG4RFKSZ NextBio:20814805 Bgee:Q6P104 Uniprot:Q6P104
Length = 319
Score = 329 (120.9 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 62/130 (47%), Positives = 91/130 (70%)
Query: 138 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREE 197
G I + ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE
Sbjct: 77 GPIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 136
Query: 198 MMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRE 257
RGKP +EHLNE LH+L+ E + +L +A E ++ LL P E D KK QL E
Sbjct: 137 QNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 196
Query: 258 LALLNGTLRE 267
LA+LNGT R+
Sbjct: 197 LAILNGTYRD 206
Score = 44 (20.5 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 40 YLSELLAERHKLNPFLP----VLPNAYRLLNQEIMRVTTLLGNASVLGQS 85
YL +L+ ++ KL LP + + RLL++EI RV + N ++ G +
Sbjct: 17 YLMQLMNDK-KLMSSLPNFCGIFNHLERLLDEEIGRVRKDMYNDTLNGST 65
>WB|WBGene00006423 [details] [associations]
symbol:asd-2 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0007411
"axon guidance" evidence=IMP] [GO:0007413 "axonal fasciculation"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0043186 "P granule" evidence=IDA]
[GO:0003727 "single-stranded RNA binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0097157 "pre-mRNA intronic binding"
evidence=IPI] [GO:0030529 "ribonucleoprotein complex" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0007411
GO:GO:0002119 GO:GO:0003727 GO:GO:0040017 GO:GO:0007413
GO:GO:0097157 GeneTree:ENSGT00550000074434 GO:GO:0000381
GO:GO:0043186 EMBL:FO080897 EMBL:FO080896 RefSeq:NP_001250340.1
UniGene:Cel.16725 ProteinModelPortal:D4YW53 SMR:D4YW53
EnsemblMetazoa:T21G5.5d GeneID:188703 KEGG:cel:CELE_T21G5.5
CTD:188703 WormBase:T21G5.5d OMA:IQQYAAG ArrayExpress:D4YW53
Uniprot:D4YW53
Length = 486
Score = 317 (116.6 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 59/130 (45%), Positives = 91/130 (70%)
Query: 144 TIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKP 203
T +V +P +++P++NFVGR+LGPRG + K++E T C++++RGRGS++D +EE+ RGKP
Sbjct: 161 TEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEELNRGKP 220
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
+EHL+E LH+L++ E +LM+A E + LL P E D K++QL ELA++NG
Sbjct: 221 NWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLLVPAPEGEDDLKRKQLMELAIING 280
Query: 264 TLREEGSPMS 273
T R G+ S
Sbjct: 281 TYRS-GTDQS 289
Score = 59 (25.8 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 39 KYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLL 76
+YLS+LL ++ +L F V + RL ++EI +V +L
Sbjct: 101 EYLSQLLKDKKQLAAFPNVFHHLERLADEEINKVRVVL 138
>WB|WBGene00001595 [details] [associations]
symbol:gld-1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0042127 "regulation of
cell proliferation" evidence=IMP] [GO:0040020 "regulation of
meiosis" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0051729 "germline cell cycle switching, mitotic to meiotic cell
cycle" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0043186 "P
granule" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] [GO:0003727
"single-stranded RNA binding" evidence=IDA] [GO:0048027 "mRNA
5'-UTR binding" evidence=IDA] [GO:0017148 "negative regulation of
translation" evidence=IMP] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005829
GO:GO:0009792 GO:GO:0007126 GO:GO:0006898 GO:GO:0030154
GO:GO:0017148 GO:GO:0003727 GO:GO:0048477 GO:GO:0051729
GO:GO:0042127 GO:GO:0048027 GO:GO:0003730 GO:GO:0040027
GO:GO:0040020 eggNOG:COG5176 GeneTree:ENSGT00550000074434
EMBL:Z81130 EMBL:U20535 PIR:T25193 RefSeq:NP_492143.1 PDB:3K6T
PDB:3KBL PDBsum:3K6T PDBsum:3KBL ProteinModelPortal:Q17339
SMR:Q17339 DIP:DIP-24870N IntAct:Q17339 MINT:MINT-1054588
STRING:Q17339 PaxDb:Q17339 EnsemblMetazoa:T23G11.3.1
EnsemblMetazoa:T23G11.3.2 GeneID:172532 KEGG:cel:CELE_T23G11.3
UCSC:T23G11.3 CTD:172532 WormBase:T23G11.3 HOGENOM:HOG000015966
InParanoid:Q17339 OMA:TENRVHL BindingDB:Q17339 ChEMBL:CHEMBL1293302
EvolutionaryTrace:Q17339 NextBio:875927 GermOnline:T23G11.3
Uniprot:Q17339
Length = 463
Score = 302 (111.4 bits), Expect = 2.8e-31, Sum P(2) = 2.8e-31
Identities = 57/135 (42%), Positives = 90/135 (66%)
Query: 137 SGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPARE 196
+G ++ T ++ +P +YP++NFVGR+LGPRG + K++E T C++++RG+GS++D ++E
Sbjct: 199 AGDMISITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKE 258
Query: 197 EMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLR 256
RGK +EHL + LH+LV+ E V +L A E ++ LL P E D K++QL
Sbjct: 259 SAHRGKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPEGTDELKRKQLM 318
Query: 257 ELALLNGTLREEGSP 271
ELA++NGT R SP
Sbjct: 319 ELAIINGTYRPMKSP 333
Score = 61 (26.5 bits), Expect = 2.8e-31, Sum P(2) = 2.8e-31
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 39 KYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLL 76
+YL++L+ E+ L F + N RLL+ EI RV L
Sbjct: 148 EYLADLVKEKKHLTLFPHMFSNVERLLDDEIGRVRVAL 185
>ZFIN|ZDB-GENE-081028-54 [details] [associations]
symbol:qkib "QKI, KH domain containing, RNA binding
b" species:7955 "Danio rerio" [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
SMART:SM00322 ZFIN:ZDB-GENE-081028-54 GO:GO:0003723
GeneTree:ENSGT00550000074434 EMBL:CABZ01010714 EMBL:CABZ01010715
EMBL:CU019624 EMBL:CU467873 EMBL:CU915796 EMBL:FP325125
IPI:IPI00898626 Ensembl:ENSDART00000018737 Uniprot:F1QTT6
Length = 345
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 70/171 (40%), Positives = 107/171 (62%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + S + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSSELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E + LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVNKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>UNIPROTKB|Q5W9D7 [details] [associations]
symbol:QKI "Protein quaking" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0006417
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 GO:GO:0051028
eggNOG:COG5176 KO:K14945 HOGENOM:HOG000019831 HOVERGEN:HBG093883
EMBL:AB177986 IPI:IPI00690241 RefSeq:NP_001007818.1
UniGene:Bt.91293 ProteinModelPortal:Q5W9D7 SMR:Q5W9D7 STRING:Q5W9D7
PRIDE:Q5W9D7 GeneID:493722 KEGG:bta:493722 CTD:9444
NextBio:20865466 Uniprot:Q5W9D7
Length = 341
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>UNIPROTKB|Q9GMY1 [details] [associations]
symbol:QKI "Protein quaking" species:9615 "Canis lupus
familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0006417
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 GO:GO:0051028
eggNOG:COG5176 KO:K14945 HOGENOM:HOG000019831 HOVERGEN:HBG093883
CTD:9444 EMBL:AB047312 RefSeq:NP_001003021.1 UniGene:Cfa.57
ProteinModelPortal:Q9GMY1 SMR:Q9GMY1 PRIDE:Q9GMY1 GeneID:606754
KEGG:cfa:606754 NextBio:20892526 Uniprot:Q9GMY1
Length = 341
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>UNIPROTKB|Q96PU8 [details] [associations]
symbol:QKI "Protein quaking" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0017124
"SH3 domain binding" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042692 "muscle cell
differentiation" evidence=IEA] [GO:0042759 "long-chain fatty acid
biosynthetic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0008380
GO:GO:0007286 GO:GO:0006397 GO:GO:0003723 GO:GO:0042692
GO:GO:0042759 GO:GO:0042552 GO:GO:0010628 GO:GO:0001570
GO:GO:0051028 eggNOG:COG5176 KO:K14945 HOVERGEN:HBG093883
OMA:GMAFPTK OrthoDB:EOG4RFKSZ CTD:9444 EMBL:AB067798 EMBL:AB067799
EMBL:AB067800 EMBL:AB067801 EMBL:AB067808 EMBL:AF142417
EMBL:AF142418 EMBL:AF142419 EMBL:AF142420 EMBL:AF142421
EMBL:AF142422 EMBL:AY780788 EMBL:DQ323998 EMBL:AL356119
EMBL:AL031781 EMBL:BC012222 EMBL:BC019917 EMBL:AK027309
IPI:IPI00385562 IPI:IPI00514277 IPI:IPI00736672 IPI:IPI00749287
IPI:IPI00759828 IPI:IPI00942653 RefSeq:NP_006766.1
RefSeq:NP_996735.1 RefSeq:NP_996736.1 RefSeq:NP_996737.1
UniGene:Hs.510324 ProteinModelPortal:Q96PU8 SMR:Q96PU8
IntAct:Q96PU8 MINT:MINT-1445480 STRING:Q96PU8 PhosphoSite:Q96PU8
DMDM:74761039 PaxDb:Q96PU8 PRIDE:Q96PU8 DNASU:9444
Ensembl:ENST00000275262 Ensembl:ENST00000361195
Ensembl:ENST00000361752 Ensembl:ENST00000361758
Ensembl:ENST00000392127 Ensembl:ENST00000424802
Ensembl:ENST00000453779 GeneID:9444 KEGG:hsa:9444 UCSC:uc003que.3
UCSC:uc003quf.3 UCSC:uc003qug.3 UCSC:uc003quh.3 UCSC:uc003qui.3
UCSC:uc003quj.3 GeneCards:GC06P163835 HGNC:HGNC:21100 HPA:CAB022602
HPA:HPA019123 MIM:609590 neXtProt:NX_Q96PU8 PharmGKB:PA134912180
InParanoid:Q96PU8 ChiTaRS:QKI GenomeRNAi:9444 NextBio:35368
ArrayExpress:Q96PU8 Bgee:Q96PU8 Genevestigator:Q96PU8
GermOnline:ENSG00000112531 Uniprot:Q96PU8
Length = 341
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>UNIPROTKB|Q5W9D5 [details] [associations]
symbol:QKI "Protein quaking" species:9823 "Sus scrofa"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0006417
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 GO:GO:0051028
eggNOG:COG5176 KO:K14945 HOGENOM:HOG000019831 HOVERGEN:HBG093883
OrthoDB:EOG4RFKSZ CTD:9444 EMBL:AB177988 RefSeq:NP_001007196.1
UniGene:Ssc.7659 ProteinModelPortal:Q5W9D5 SMR:Q5W9D5 PRIDE:Q5W9D5
GeneID:492277 KEGG:ssc:492277 Uniprot:Q5W9D5
Length = 341
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>MGI|MGI:97837 [details] [associations]
symbol:Qk "quaking" species:10090 "Mus musculus" [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IGI] [GO:0008366 "axon ensheathment"
evidence=IMP] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0017124
"SH3 domain binding" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0042552 "myelination"
evidence=IMP] [GO:0042692 "muscle cell differentiation"
evidence=IMP] [GO:0042759 "long-chain fatty acid biosynthetic
process" evidence=IMP] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 MGI:MGI:97837 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0008380 GO:GO:0007286
GO:GO:0006397 GO:GO:0003723 GO:GO:0042692 GO:GO:0042759
GO:GO:0042552 GO:GO:0010628 GO:GO:0001570 GO:GO:0051028
eggNOG:COG5176 GeneTree:ENSGT00550000074434 KO:K14945
HOVERGEN:HBG093883 OMA:GMAFPTK OrthoDB:EOG4RFKSZ EMBL:U44940
EMBL:AF090402 EMBL:AF090403 EMBL:AF090404 EMBL:AF091047
EMBL:AF090401 EMBL:AF090392 EMBL:AF090393 EMBL:AF090394
EMBL:AF090395 EMBL:AF090396 EMBL:AF090397 EMBL:AF090400
EMBL:AF467890 EMBL:AK005169 EMBL:AK132303 EMBL:BC053426
EMBL:BC056346 EMBL:AJ012812 EMBL:AJ012813 EMBL:AJ012814
EMBL:AJ012816 EMBL:AJ012817 EMBL:AJ012815 EMBL:AJ012818
EMBL:AJ012820 EMBL:AJ012819 IPI:IPI00130483 IPI:IPI00136596
IPI:IPI00759871 IPI:IPI00759885 IPI:IPI00759892 IPI:IPI00759906
IPI:IPI00759949 IPI:IPI00760097 RefSeq:NP_001152988.1
RefSeq:NP_001152989.1 RefSeq:NP_068681.1 UniGene:Mm.130694
UniGene:Mm.384135 UniGene:Mm.393248 PDB:4DNN PDBsum:4DNN
ProteinModelPortal:Q9QYS9 SMR:Q9QYS9 STRING:Q9QYS9
PhosphoSite:Q9QYS9 PaxDb:Q9QYS9 PRIDE:Q9QYS9
Ensembl:ENSMUST00000042296 Ensembl:ENSMUST00000097414 GeneID:19317
KEGG:mmu:19317 UCSC:uc008akb.2 UCSC:uc008ake.2 UCSC:uc012ajv.1
CTD:19317 InParanoid:Q9QYS9 NextBio:296279 Bgee:Q9QYS9
CleanEx:MM_QK Genevestigator:Q9QYS9 GermOnline:ENSMUSG00000062078
Uniprot:Q9QYS9
Length = 341
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>RGD|1584886 [details] [associations]
symbol:Qk "quaking" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007286 "spermatid development" evidence=ISO] [GO:0008366 "axon
ensheathment" evidence=ISO] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=ISO] [GO:0017124 "SH3 domain binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042552
"myelination" evidence=ISO] [GO:0042692 "muscle cell
differentiation" evidence=ISO] [GO:0042759 "long-chain fatty acid
biosynthetic process" evidence=ISO] [GO:0051028 "mRNA transport"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0008380 GO:GO:0007286
GO:GO:0006397 GO:GO:0003723 GO:GO:0042692 GO:GO:0042759
GO:GO:0042552 GO:GO:0010628 GO:GO:0001570 GO:GO:0051028
eggNOG:COG5176 HOGENOM:HOG000019831 HOVERGEN:HBG093883 OMA:GMAFPTK
OrthoDB:EOG4RFKSZ EMBL:AABR03000138 EMBL:AB054997 IPI:IPI00394474
UniGene:Rn.228876 ProteinModelPortal:Q91XU1 SMR:Q91XU1
STRING:Q91XU1 PhosphoSite:Q91XU1 RGD:628653 InParanoid:Q91XU1
ArrayExpress:Q91XU1 Genevestigator:Q91XU1
GermOnline:ENSRNOG00000017174 Uniprot:Q91XU1
Length = 341
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>UNIPROTKB|D4A2X0 [details] [associations]
symbol:Qk "Protein Qk" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 RGD:1584886
GO:GO:0003723 IPI:IPI00213936 PRIDE:D4A2X0
Ensembl:ENSRNOT00000023290 ArrayExpress:D4A2X0 Uniprot:D4A2X0
Length = 338
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>UNIPROTKB|F1LMH5 [details] [associations]
symbol:Qk "Protein Qk" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0042692
"muscle cell differentiation" evidence=IEA] [GO:0042759 "long-chain
fatty acid biosynthetic process" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 RGD:1584886
GO:GO:0005886 GO:GO:0005634 GO:GO:0007286 GO:GO:0003723
GO:GO:0042692 GO:GO:0042759 GO:GO:0042552 GO:GO:0010628
GO:GO:0001570 IPI:IPI01016326 Ensembl:ENSRNOT00000035402
ArrayExpress:F1LMH5 Uniprot:F1LMH5
Length = 341
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>UNIPROTKB|F1NWU9 [details] [associations]
symbol:QKI "Protein quaking" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 GO:GO:0003723
GeneTree:ENSGT00550000074434 IPI:IPI00682938 EMBL:AADN02035543
EMBL:AADN02035544 Ensembl:ENSGALT00000018845 ArrayExpress:F1NWU9
Uniprot:F1NWU9
Length = 334
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKKMQLMELAILNGTYRD 206
>UNIPROTKB|F1NWV0 [details] [associations]
symbol:QKI "Protein quaking" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0042692
"muscle cell differentiation" evidence=IEA] [GO:0042759 "long-chain
fatty acid biosynthetic process" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 GO:GO:0005886
GO:GO:0005634 GO:GO:0003723 GO:GO:0042759 GO:GO:0010628
GeneTree:ENSGT00550000074434 OMA:GMAFPTK IPI:IPI00760364
EMBL:AADN02035543 EMBL:AADN02035544 Ensembl:ENSGALT00000018844
ArrayExpress:F1NWV0 Uniprot:F1NWV0
Length = 340
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKKMQLMELAILNGTYRD 206
>UNIPROTKB|Q9YH18 [details] [associations]
symbol:QKI "Protein quaking" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0017124
"SH3 domain binding" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0006417
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 GO:GO:0051028
eggNOG:COG5176 KO:K14945 HOGENOM:HOG000019831 HOVERGEN:HBG093883
CTD:9444 EMBL:U86764 EMBL:U86765 EMBL:U86766 EMBL:U86767
IPI:IPI00582039 IPI:IPI00595503 IPI:IPI00682938 IPI:IPI00760364
RefSeq:NP_989641.2 UniGene:Gga.3168 ProteinModelPortal:Q9YH18
SMR:Q9YH18 STRING:Q9YH18 GeneID:374204 KEGG:gga:374204
InParanoid:Q9YH18 NextBio:20813708 Uniprot:Q9YH18
Length = 340
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKKMQLMELAILNGTYRD 206
>UNIPROTKB|F1N7N1 [details] [associations]
symbol:QKI "Protein quaking" species:9913 "Bos taurus"
[GO:0042759 "long-chain fatty acid biosynthetic process"
evidence=IEA] [GO:0042692 "muscle cell differentiation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IEA] [GO:0007286
"spermatid development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0005886 GO:GO:0005634 GO:GO:0007286 GO:GO:0003723
GO:GO:0042692 GO:GO:0042759 GO:GO:0042552 GO:GO:0010628
GO:GO:0001570 GeneTree:ENSGT00550000074434 IPI:IPI00690241
EMBL:DAAA02027443 EMBL:DAAA02027444 EMBL:DAAA02027445
EMBL:DAAA02027446 EMBL:DAAA02027447 Ensembl:ENSBTAT00000054202
OMA:CLTHLKF Uniprot:F1N7N1
Length = 315
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 66/157 (42%), Positives = 102/157 (64%)
Query: 111 SRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNS 170
SR + ++ + S + + + G IV+ ++ +PV++YP+FNFVGR+LGPRG +
Sbjct: 24 SRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLT 83
Query: 171 LKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLM 230
K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+ E + +L
Sbjct: 84 AKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLK 143
Query: 231 QAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
+A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 144 RAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 180
>UNIPROTKB|F1PLY2 [details] [associations]
symbol:QKI "Protein quaking" species:9615 "Canis lupus
familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00550000074434 EMBL:AAEX03000337
EMBL:AAEX03000338 Ensembl:ENSCAFT00000001203 Uniprot:F1PLY2
Length = 310
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 66/157 (42%), Positives = 102/157 (64%)
Query: 111 SRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNS 170
SR + ++ + S + + + G IV+ ++ +PV++YP+FNFVGR+LGPRG +
Sbjct: 24 SRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLT 83
Query: 171 LKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLM 230
K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+ E + +L
Sbjct: 84 AKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLK 143
Query: 231 QAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
+A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 144 RAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 180
>UNIPROTKB|F1PX61 [details] [associations]
symbol:QKI "Protein quaking" species:9615 "Canis lupus
familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00550000074434 OMA:CLTHLKF
EMBL:AAEX03000337 EMBL:AAEX03000338 Ensembl:ENSCAFT00000035144
Uniprot:F1PX61
Length = 339
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 66/157 (42%), Positives = 102/157 (64%)
Query: 111 SRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNS 170
SR + ++ + S + + + G IV+ ++ +PV++YP+FNFVGR+LGPRG +
Sbjct: 53 SRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLT 112
Query: 171 LKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLM 230
K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+ E + +L
Sbjct: 113 AKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLK 172
Query: 231 QAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
+A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 173 RAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 209
>UNIPROTKB|F1SBW4 [details] [associations]
symbol:QKI "Protein quaking" species:9823 "Sus scrofa"
[GO:0042759 "long-chain fatty acid biosynthetic process"
evidence=IEA] [GO:0042692 "muscle cell differentiation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IEA] [GO:0007286
"spermatid development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0005886 GO:GO:0005634 GO:GO:0007286 GO:GO:0003723
GO:GO:0042692 GO:GO:0042759 GO:GO:0042552 GO:GO:0010628
GO:GO:0001570 GeneTree:ENSGT00550000074434 OMA:CLTHLKF
EMBL:AEMK01188940 EMBL:CU062434 EMBL:CU074317
Ensembl:ENSSSCT00000004455 Uniprot:F1SBW4
Length = 311
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 66/157 (42%), Positives = 102/157 (64%)
Query: 111 SRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNS 170
SR + ++ + S + + + G IV+ ++ +PV++YP+FNFVGR+LGPRG +
Sbjct: 25 SRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLT 84
Query: 171 LKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLM 230
K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+ E + +L
Sbjct: 85 AKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLK 144
Query: 231 QAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
+A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 145 RAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 181
>UNIPROTKB|J9NVZ6 [details] [associations]
symbol:QKI "Protein quaking" species:9615 "Canis lupus
familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00550000074434 EMBL:AAEX03000337
EMBL:AAEX03000338 Ensembl:ENSCAFT00000045317 Uniprot:J9NVZ6
Length = 286
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 63/130 (48%), Positives = 92/130 (70%)
Query: 138 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREE 197
G IV+ ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE
Sbjct: 22 GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 81
Query: 198 MMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRE 257
RGKP +EHLNE LH+L+ E + +L +A E ++ LL P E D KK QL E
Sbjct: 82 QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 141
Query: 258 LALLNGTLRE 267
LA+LNGT R+
Sbjct: 142 LAILNGTYRD 151
>UNIPROTKB|F5GXS8 [details] [associations]
symbol:QKI "Protein quaking" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 GO:GO:0003723
EMBL:AL356119 EMBL:AL031781 HGNC:HGNC:21100 ChiTaRS:QKI
IPI:IPI01009757 ProteinModelPortal:F5GXS8 SMR:F5GXS8
Ensembl:ENST00000537041 ArrayExpress:F5GXS8 Bgee:F5GXS8
Uniprot:F5GXS8
Length = 160
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 63/130 (48%), Positives = 92/130 (70%)
Query: 138 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREE 197
G IV+ ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE
Sbjct: 22 GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 81
Query: 198 MMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRE 257
RGKP +EHLNE LH+L+ E + +L +A E ++ LL P E D KK QL E
Sbjct: 82 QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 141
Query: 258 LALLNGTLRE 267
LA+LNGT R+
Sbjct: 142 LAILNGTYRD 151
>UNIPROTKB|F5GYM3 [details] [associations]
symbol:QKI "Protein quaking" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0042692
"muscle cell differentiation" evidence=IEA] [GO:0042759 "long-chain
fatty acid biosynthetic process" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 GO:GO:0007286
GO:GO:0003723 GO:GO:0042692 GO:GO:0042759 GO:GO:0042552
GO:GO:0010628 GO:GO:0001570 EMBL:AL356119 EMBL:AL031781
HGNC:HGNC:21100 ChiTaRS:QKI IPI:IPI01009310
ProteinModelPortal:F5GYM3 SMR:F5GYM3 Ensembl:ENST00000544823
ArrayExpress:F5GYM3 Bgee:F5GYM3 Uniprot:F5GYM3
Length = 170
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 63/130 (48%), Positives = 92/130 (70%)
Query: 138 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREE 197
G IV+ ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE
Sbjct: 22 GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 81
Query: 198 MMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRE 257
RGKP +EHLNE LH+L+ E + +L +A E ++ LL P E D KK QL E
Sbjct: 82 QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 141
Query: 258 LALLNGTLRE 267
LA+LNGT R+
Sbjct: 142 LAILNGTYRD 151
>UNIPROTKB|E1BP48 [details] [associations]
symbol:KHDRBS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0008266 "poly(U)
RNA binding" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0008266
GeneTree:ENSGT00550000074434 GO:GO:0008143 CTD:202559 OMA:PPIARGV
EMBL:DAAA02054729 EMBL:DAAA02054730 EMBL:DAAA02054731
EMBL:DAAA02054732 EMBL:DAAA02054733 EMBL:DAAA02054734
EMBL:DAAA02054735 EMBL:DAAA02054736 EMBL:DAAA02054737
EMBL:DAAA02054738 EMBL:DAAA02054739 EMBL:DAAA02054740
EMBL:DAAA02054741 EMBL:DAAA02054742 EMBL:DAAA02054743
EMBL:DAAA02054744 EMBL:DAAA02054745 EMBL:DAAA02054746
IPI:IPI00913818 RefSeq:XP_002697212.1 Ensembl:ENSBTAT00000061105
GeneID:789972 KEGG:bta:789972 NextBio:20929992 Uniprot:E1BP48
Length = 348
Score = 273 (101.2 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 57/126 (45%), Positives = 87/126 (69%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
+K + RV IPV++YP FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R
Sbjct: 58 IKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELR 117
Query: 201 --GKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREL 258
G+ Y HL++ LH+L+E P +R+ A E ++ L P + +D +++QLREL
Sbjct: 118 KSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLREL 175
Query: 259 ALLNGT 264
+ LNG+
Sbjct: 176 SYLNGS 181
Score = 70 (29.7 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 35 LDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEI 69
+++EKYL EL+AER L+P +A RLL +EI
Sbjct: 1 MEEEKYLPELMAERDSLDPSFV---HASRLLAEEI 32
>UNIPROTKB|E1BVW8 [details] [associations]
symbol:KHDRBS2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0008266
GeneTree:ENSGT00550000074434 GO:GO:0008143 CTD:202559 OMA:PPIARGV
EMBL:AADN02002672 EMBL:AADN02002673 EMBL:AADN02002674
EMBL:AADN02002675 EMBL:AADN02002676 EMBL:AADN02002677
EMBL:AADN02002678 EMBL:AADN02002679 EMBL:AADN02002680
IPI:IPI00593041 RefSeq:XP_426201.2 UniGene:Gga.14902
Ensembl:ENSGALT00000026242 GeneID:428643 KEGG:gga:428643
NextBio:20829580 Uniprot:E1BVW8
Length = 348
Score = 273 (101.2 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 57/126 (45%), Positives = 87/126 (69%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
+K + RV IPV++YP FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R
Sbjct: 58 IKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELR 117
Query: 201 --GKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREL 258
G+ Y HL++ LH+L+E P +R+ A E ++ L P + +D +++QLREL
Sbjct: 118 KSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLREL 175
Query: 259 ALLNGT 264
+ LNG+
Sbjct: 176 SYLNGS 181
Score = 69 (29.3 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 35 LDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEI 69
++QEKYL EL+AE+ L+P +A RLL EI
Sbjct: 1 MEQEKYLPELMAEKDSLDPSFV---HAMRLLADEI 32
>UNIPROTKB|E2QWN2 [details] [associations]
symbol:KHDRBS2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=IEA] [GO:0017124 "SH3 domain binding" evidence=IEA]
[GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0008266 GeneTree:ENSGT00550000074434 GO:GO:0008143 CTD:202559
OMA:PPIARGV EMBL:AAEX03008417 EMBL:AAEX03008418 EMBL:AAEX03008419
RefSeq:XP_538980.2 ProteinModelPortal:E2QWN2
Ensembl:ENSCAFT00000003891 GeneID:481859 KEGG:cfa:481859
NextBio:20856585 Uniprot:E2QWN2
Length = 349
Score = 273 (101.2 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 57/126 (45%), Positives = 87/126 (69%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
+K + RV IPV++YP FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R
Sbjct: 58 IKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELR 117
Query: 201 --GKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREL 258
G+ Y HL++ LH+L+E P +R+ A E ++ L P + +D +++QLREL
Sbjct: 118 KSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLREL 175
Query: 259 ALLNGT 264
+ LNG+
Sbjct: 176 SYLNGS 181
Score = 67 (28.6 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 35 LDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEI 69
+++EKYL EL+AE+ L+P +A RLL +EI
Sbjct: 1 MEEEKYLPELMAEKDSLDPSFV---HASRLLAEEI 32
>UNIPROTKB|Q5VWX1 [details] [associations]
symbol:KHDRBS2 "KH domain-containing, RNA-binding, signal
transduction-associated protein 2" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0008266 GO:GO:0006355 GO:GO:0006351
eggNOG:COG5176 GO:GO:0008143 HOGENOM:HOG000230771
HOVERGEN:HBG079164 CTD:202559 OMA:PPIARGV OrthoDB:EOG418BP2
EMBL:AY077838 EMBL:AK292043 EMBL:AL360220 EMBL:AL049544
EMBL:AL138882 EMBL:AL355347 EMBL:AL391644 EMBL:Z93021 EMBL:CH471143
EMBL:BC034043 IPI:IPI00166708 RefSeq:NP_689901.2 UniGene:Hs.519794
HSSP:Q32NN2 ProteinModelPortal:Q5VWX1 SMR:Q5VWX1 IntAct:Q5VWX1
MINT:MINT-1449914 STRING:Q5VWX1 PhosphoSite:Q5VWX1 DMDM:74762274
PaxDb:Q5VWX1 PRIDE:Q5VWX1 DNASU:202559 Ensembl:ENST00000281156
GeneID:202559 KEGG:hsa:202559 UCSC:uc003peg.2 GeneCards:GC06M062447
H-InvDB:HIX0005989 HGNC:HGNC:18114 HPA:HPA029392 MIM:610487
neXtProt:NX_Q5VWX1 PharmGKB:PA30093 InParanoid:Q5VWX1
PhylomeDB:Q5VWX1 GenomeRNAi:202559 NextBio:90301
ArrayExpress:Q5VWX1 Bgee:Q5VWX1 CleanEx:HS_KHDRBS2
Genevestigator:Q5VWX1 Uniprot:Q5VWX1
Length = 349
Score = 273 (101.2 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 57/126 (45%), Positives = 87/126 (69%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
+K + RV IPV++YP FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R
Sbjct: 58 IKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELR 117
Query: 201 --GKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREL 258
G+ Y HL++ LH+L+E P +R+ A E ++ L P + +D +++QLREL
Sbjct: 118 KSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLREL 175
Query: 259 ALLNGT 264
+ LNG+
Sbjct: 176 SYLNGS 181
Score = 67 (28.6 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 35 LDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEI 69
+++EKYL EL+AE+ L+P +A RLL +EI
Sbjct: 1 MEEEKYLPELMAEKDSLDPSFV---HASRLLAEEI 32
>UNIPROTKB|F1RZV6 [details] [associations]
symbol:KHDRBS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0008266 "poly(U)
RNA binding" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0008266
GeneTree:ENSGT00550000074434 GO:GO:0008143 OMA:PPIARGV
EMBL:CT797468 EMBL:CT961061 EMBL:CU407231 EMBL:CU570917
EMBL:FP565898 Ensembl:ENSSSCT00000001662 Uniprot:F1RZV6
Length = 277
Score = 273 (101.2 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 57/126 (45%), Positives = 87/126 (69%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
+K + RV IPV++YP FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R
Sbjct: 58 IKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELR 117
Query: 201 --GKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREL 258
G+ Y HL++ LH+L+E P +R+ A E ++ L P + +D +++QLREL
Sbjct: 118 KSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLREL 175
Query: 259 ALLNGT 264
+ LNG+
Sbjct: 176 SYLNGS 181
Score = 67 (28.6 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 35 LDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEI 69
+++EKYL EL+AE+ L+P +A RLL +EI
Sbjct: 1 MEEEKYLPELMAEKDSLDPSFV---HASRLLAEEI 32
>RGD|621738 [details] [associations]
symbol:Khdrbs2 "KH domain containing, RNA binding, signal
transduction associated 2" species:10116 "Rattus norvegicus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA;ISO] [GO:0008266 "poly(U) RNA binding"
evidence=IEA;ISO] [GO:0017124 "SH3 domain binding"
evidence=IEA;ISO] [GO:0042169 "SH2 domain binding"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA;ISO] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 RGD:621738 GO:GO:0005634
GO:GO:0008266 GO:GO:0006355 GO:GO:0006351 eggNOG:COG5176
GeneTree:ENSGT00550000074434 GO:GO:0008143 HOGENOM:HOG000230771
HOVERGEN:HBG079164 CTD:202559 OMA:PPIARGV OrthoDB:EOG418BP2
HSSP:Q32NN2 EMBL:AF305618 IPI:IPI00200486 RefSeq:NP_579852.1
UniGene:Rn.154423 ProteinModelPortal:Q920F3 STRING:Q920F3
PhosphoSite:Q920F3 PRIDE:Q920F3 Ensembl:ENSRNOT00000016578
GeneID:170843 KEGG:rno:170843 UCSC:RGD:621738 InParanoid:Q920F3
NextBio:621265 ArrayExpress:Q920F3 Genevestigator:Q920F3
Uniprot:Q920F3
Length = 349
Score = 275 (101.9 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 59/131 (45%), Positives = 89/131 (67%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
+K + RV IPV++YP FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R
Sbjct: 58 IKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELR 117
Query: 201 --GKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREL 258
G+ Y HL++ LH+L+E P +R+ A E ++ L P + +D +++QLREL
Sbjct: 118 KSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLREL 175
Query: 259 ALLNGTLREEG 269
+ LNG+ E G
Sbjct: 176 SYLNGS-EESG 185
Score = 64 (27.6 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 35 LDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEI 69
+ +EKYL EL+AE+ L+P +A RLL +EI
Sbjct: 1 MGEEKYLPELMAEKDSLDPSFV---HASRLLAEEI 32
>MGI|MGI:2159649 [details] [associations]
symbol:Khdrbs2 "KH domain containing, RNA binding, signal
transduction associated 2" species:10090 "Mus musculus" [GO:0003723
"RNA binding" evidence=IEA] [GO:0005070 "SH3/SH2 adaptor activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IDA] [GO:0008266
"poly(U) RNA binding" evidence=IDA] [GO:0017124 "SH3 domain
binding" evidence=IDA] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IDA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 MGI:MGI:2159649 GO:GO:0005634
GO:GO:0008266 GO:GO:0006355 GO:GO:0005070 GO:GO:0017124
GO:GO:0006351 GO:GO:0042169 GO:GO:0046982 eggNOG:COG5176
GeneTree:ENSGT00550000074434 GO:GO:0008143 HOGENOM:HOG000230771
HOVERGEN:HBG079164 CTD:202559 OMA:PPIARGV OrthoDB:EOG418BP2
HSSP:Q32NN2 EMBL:AF098796 EMBL:BC066814 EMBL:BC132117 EMBL:BC132119
IPI:IPI00322691 IPI:IPI00874354 RefSeq:NP_573498.1
UniGene:Mm.336594 ProteinModelPortal:Q9WU01 SMR:Q9WU01
STRING:Q9WU01 PhosphoSite:Q9WU01 PaxDb:Q9WU01 PRIDE:Q9WU01
Ensembl:ENSMUST00000027226 GeneID:170771 KEGG:mmu:170771
UCSC:uc007ano.1 UCSC:uc007anp.1 InParanoid:Q9WU01 ChiTaRS:KHDRBS2
NextBio:370395 Bgee:Q9WU01 Genevestigator:Q9WU01 Uniprot:Q9WU01
Length = 349
Score = 271 (100.5 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 58/131 (44%), Positives = 88/131 (67%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
+K + RV IPV++YP FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D +EE +R
Sbjct: 58 IKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKTKEEELR 117
Query: 201 --GKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREL 258
G+ Y HL++ LH+L+E P +R+ A E ++ L P + +D +++QLREL
Sbjct: 118 KSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLREL 175
Query: 259 ALLNGTLREEG 269
+ LNG+ E G
Sbjct: 176 SYLNGS-EESG 185
Score = 64 (27.6 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 35 LDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEI 69
+ +EKYL EL+AE+ L+P +A RLL +EI
Sbjct: 1 MGEEKYLPELMAEKDSLDPSFV---HASRLLAEEI 32
>ZFIN|ZDB-GENE-061013-497 [details] [associations]
symbol:khdrbs2 "KH domain containing, RNA binding,
signal transduction associated 2" species:7955 "Danio rerio"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 ZFIN:ZDB-GENE-061013-497
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0003723
eggNOG:COG5176 GeneTree:ENSGT00550000074434 HOGENOM:HOG000230771
HOVERGEN:HBG079164 EMBL:BC124701 IPI:IPI00802483
RefSeq:NP_001070758.1 UniGene:Dr.92774 ProteinModelPortal:Q08BJ2
PRIDE:Q08BJ2 Ensembl:ENSDART00000101134 GeneID:768147
KEGG:dre:768147 CTD:202559 InParanoid:Q08BJ2 OMA:PPIARGV
OrthoDB:EOG418BP2 NextBio:20918466 Bgee:Q08BJ2 Uniprot:Q08BJ2
Length = 346
Score = 266 (98.7 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 55/126 (43%), Positives = 85/126 (67%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
+K + RV IPV++YP FNFVG+LLGPRGNS+KR++ T ++ I G+GS++D +EE +R
Sbjct: 58 IKLSERVLIPVQQYPKFNFVGKLLGPRGNSMKRLQEETGAKMSILGKGSMRDKGKEEELR 117
Query: 201 --GKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREL 258
G+ Y HL+ LH+L+E P +R+ A E ++ L P + +D +++QLREL
Sbjct: 118 KSGEAKYAHLSNDLHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLREL 175
Query: 259 ALLNGT 264
+ LNG+
Sbjct: 176 SYLNGS 181
Score = 64 (27.6 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 35 LDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEI 69
+DQ+KYL EL+AE+ L+ +A RLL +EI
Sbjct: 1 MDQDKYLPELVAEKESLDASFV---HAMRLLAEEI 32
>UNIPROTKB|A4FV24 [details] [associations]
symbol:KHDRBS3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 SMART:SM00322
GO:GO:0005634 GO:GO:0003723 eggNOG:COG5176
GeneTree:ENSGT00550000074434 HOGENOM:HOG000230771
HOVERGEN:HBG079164 CTD:10656 KO:K14942 OMA:ETYGEYE
OrthoDB:EOG4DBTFN EMBL:DAAA02037568 EMBL:DAAA02037569 EMBL:BC123651
IPI:IPI00717873 RefSeq:NP_001076981.1 UniGene:Bt.50935
STRING:A4FV24 Ensembl:ENSBTAT00000002827 GeneID:615095
KEGG:bta:615095 InParanoid:A4FV24 NextBio:20899441 Uniprot:A4FV24
Length = 346
Score = 256 (95.2 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 62/150 (41%), Positives = 91/150 (60%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
+V IPV+++P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R G+
Sbjct: 59 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 118
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN+ LH+L+E P AR+ A E ++ L P + +D ++ QL+EL LNG
Sbjct: 119 KYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNG 176
Query: 264 TLREEGSPMSGSVSPFHNSLGMKR-AKTRG 292
P+ P + G+ A TRG
Sbjct: 177 GSENADVPVVRG-KPTLRTRGVPTPAITRG 205
Score = 73 (30.8 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEI 69
+EKYL EL+AE+ L+P +A RL+NQEI
Sbjct: 2 EEKYLPELMAEKDSLDPSFT---HALRLVNQEI 31
>UNIPROTKB|E2RLG8 [details] [associations]
symbol:KHDRBS3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
SMART:SM00322 GO:GO:0005634 GO:GO:0003723
GeneTree:ENSGT00550000074434 CTD:10656 KO:K14942 OMA:ETYGEYE
EMBL:AAEX03008846 RefSeq:XP_848348.1 Ensembl:ENSCAFT00000001808
GeneID:475106 KEGG:cfa:475106 Uniprot:E2RLG8
Length = 346
Score = 256 (95.2 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 62/150 (41%), Positives = 91/150 (60%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
+V IPV+++P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R G+
Sbjct: 59 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 118
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN+ LH+L+E P AR+ A E ++ L P + +D ++ QL+EL LNG
Sbjct: 119 KYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNG 176
Query: 264 TLREEGSPMSGSVSPFHNSLGMKR-AKTRG 292
P+ P + G+ A TRG
Sbjct: 177 GSENADVPVVRG-KPTLRTRGVPTPAITRG 205
Score = 73 (30.8 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEI 69
+EKYL EL+AE+ L+P +A RL+NQEI
Sbjct: 2 EEKYLPELMAEKDSLDPSFT---HALRLVNQEI 31
>UNIPROTKB|O75525 [details] [associations]
symbol:KHDRBS3 "KH domain-containing, RNA-binding, signal
transduction-associated protein 3" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0017124 "SH3 domain binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR004087 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0006355 GO:GO:0003727
GO:GO:0006397 GO:GO:0007283 GO:GO:0006351 GO:GO:0003723
eggNOG:COG5176 GO:GO:0033120 HOGENOM:HOG000230771
HOVERGEN:HBG079164 HPA:HPA029392 EMBL:AF051321 EMBL:AF051322
EMBL:AF069681 EMBL:BC032606 EMBL:BC068536 IPI:IPI00008570
IPI:IPI00744983 RefSeq:NP_006549.1 UniGene:Hs.444558
ProteinModelPortal:O75525 SMR:O75525 IntAct:O75525
MINT:MINT-1411200 STRING:O75525 PhosphoSite:O75525 PaxDb:O75525
PRIDE:O75525 DNASU:10656 Ensembl:ENST00000355849 GeneID:10656
KEGG:hsa:10656 UCSC:uc003yuv.3 UCSC:uc003yuw.3 CTD:10656
GeneCards:GC08P136538 HGNC:HGNC:18117 HPA:HPA000275 HPA:HPA000500
MIM:610421 neXtProt:NX_O75525 PharmGKB:PA30094 InParanoid:O75525
KO:K14942 OMA:ETYGEYE OrthoDB:EOG4DBTFN PhylomeDB:O75525
GenomeRNAi:10656 NextBio:40513 ArrayExpress:O75525 Bgee:O75525
CleanEx:HS_KHDRBS3 Genevestigator:O75525 GermOnline:ENSG00000131773
Uniprot:O75525
Length = 346
Score = 256 (95.2 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 62/150 (41%), Positives = 91/150 (60%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
+V IPV+++P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R G+
Sbjct: 59 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 118
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN+ LH+L+E P AR+ A E ++ L P + +D ++ QL+EL LNG
Sbjct: 119 KYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNG 176
Query: 264 TLREEGSPMSGSVSPFHNSLGMKR-AKTRG 292
P+ P + G+ A TRG
Sbjct: 177 GSENADVPVVRG-KPTLRTRGVPAPAITRG 205
Score = 73 (30.8 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEI 69
+EKYL EL+AE+ L+P +A RL+NQEI
Sbjct: 2 EEKYLPELMAEKDSLDPSFT---HALRLVNQEI 31
>MGI|MGI:1313312 [details] [associations]
symbol:Khdrbs3 "KH domain containing, RNA binding, signal
transduction associated 3" species:10090 "Mus musculus" [GO:0003723
"RNA binding" evidence=ISO] [GO:0003727 "single-stranded RNA
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=ISO]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0033120
"positive regulation of RNA splicing" evidence=ISO]
InterPro:IPR004087 PROSITE:PS50084 SMART:SM00322 MGI:MGI:1313312
GO:GO:0005634 GO:GO:0006355 GO:GO:0003727 GO:GO:0006397
GO:GO:0006351 GO:GO:0003723 eggNOG:COG5176
GeneTree:ENSGT00550000074434 GO:GO:0033120 HOGENOM:HOG000230771
HOVERGEN:HBG079164 CTD:10656 KO:K14942 OMA:ETYGEYE
OrthoDB:EOG4DBTFN EMBL:AF079763 EMBL:AF099092 EMBL:BC031507
EMBL:BC057577 IPI:IPI00314520 RefSeq:NP_034288.2 UniGene:Mm.17964
ProteinModelPortal:Q9R226 SMR:Q9R226 IntAct:Q9R226 STRING:Q9R226
PhosphoSite:Q9R226 PaxDb:Q9R226 PRIDE:Q9R226
Ensembl:ENSMUST00000022954 GeneID:13992 KEGG:mmu:13992
UCSC:uc007wbf.1 InParanoid:Q9R226 NextBio:284872 Bgee:Q9R226
Genevestigator:Q9R226 GermOnline:ENSMUSG00000022332 Uniprot:Q9R226
Length = 346
Score = 257 (95.5 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 61/149 (40%), Positives = 88/149 (59%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
+V IPV+++P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R G+
Sbjct: 59 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 118
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN+ LH+L+E P AR+ A E ++ L P + +D ++ QL+EL LNG
Sbjct: 119 KYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNG 176
Query: 264 TLREEGSPMSGSVSPFHNSLGMKRAKTRG 292
P+ S A TRG
Sbjct: 177 GSENADVPVVRGKSTLRTRGVTTPAITRG 205
Score = 69 (29.3 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEI 69
+EKYL EL+AE+ L+P +A RL+N+EI
Sbjct: 2 EEKYLPELMAEKDSLDPSFT---HALRLVNREI 31
>RGD|620921 [details] [associations]
symbol:Khdrbs3 "KH domain containing, RNA binding, signal
transduction associated 3" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA;ISO;ISS] [GO:0003727
"single-stranded RNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IDA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0033120
"positive regulation of RNA splicing" evidence=IMP] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR004087 PROSITE:PS50084
SMART:SM00322 RGD:620921 GO:GO:0005634 GO:GO:0006355 GO:GO:0003727
GO:GO:0006397 GO:GO:0006351 GO:GO:0033120 HOGENOM:HOG000230771
HOVERGEN:HBG079164 CTD:10656 KO:K14942 OrthoDB:EOG4DBTFN
EMBL:AF152547 IPI:IPI00203901 RefSeq:NP_071585.1 UniGene:Rn.229046
ProteinModelPortal:Q9JLP1 STRING:Q9JLP1 PhosphoSite:Q9JLP1
PRIDE:Q9JLP1 GeneID:64015 KEGG:rno:64015 UCSC:RGD:620921
eggNOG:NOG249423 InParanoid:Q9JLP1 NextBio:612594
ArrayExpress:Q9JLP1 Genevestigator:Q9JLP1
GermOnline:ENSRNOG00000009539 Uniprot:Q9JLP1
Length = 346
Score = 257 (95.5 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 61/149 (40%), Positives = 88/149 (59%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
+V IPV+++P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R G+
Sbjct: 59 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 118
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN+ LH+L+E P AR+ A E ++ L P + +D ++ QL+EL LNG
Sbjct: 119 KYFHLNDDLHVLIEVFAPPAEAYARMGHALEDIKKFLIP--DYNDEIRQAQLQELTYLNG 176
Query: 264 TLREEGSPMSGSVSPFHNSLGMKRAKTRG 292
P+ S A TRG
Sbjct: 177 GSENADVPVVRGKSTLRTRGVTTPAITRG 205
Score = 69 (29.3 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEI 69
+EKYL EL+AE+ L+P +A RL+N+EI
Sbjct: 2 EEKYLPELMAEKDSLDPSFT---HALRLVNREI 31
>UNIPROTKB|E1C4N4 [details] [associations]
symbol:KHDRBS1 "KH domain-containing, RNA-binding, signal
transduction-associated protein 1" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005070 "SH3/SH2
adaptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046831 "regulation of RNA export from nucleus" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0045892 GO:GO:0016020
GO:GO:0003723 GO:GO:0007166 GeneTree:ENSGT00550000074434
GO:GO:0046831 EMBL:AADN02043780 EMBL:AADN02043781 EMBL:AADN02043782
IPI:IPI00822118 Ensembl:ENSGALT00000040759 Uniprot:E1C4N4
Length = 355
Score = 245 (91.3 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 56/134 (41%), Positives = 82/134 (61%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+EE +R G P
Sbjct: 64 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 123
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN LH+ +E P A + A E ++ L P D D ++Q L EL+ LNG
Sbjct: 124 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP-DMMDDICQEQFL-ELSYLNG 181
Query: 264 T---LREEGSPMSG 274
R G P+ G
Sbjct: 182 VPEPTRGRGGPVRG 195
Score = 59 (25.8 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRV 72
+ KYL EL+AE+ L+P +A +LL+ EI ++
Sbjct: 4 ENKYLPELMAEKDSLDPSFT---HAMQLLSAEIEKI 36
>ZFIN|ZDB-GENE-040426-2344 [details] [associations]
symbol:khdrbs1b "KH domain containing, RNA
binding, signal transduction associated 1b" species:7955 "Danio
rerio" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
ZFIN:ZDB-GENE-040426-2344 GO:GO:0003723 EMBL:BX547939 HSSP:Q9BW01
eggNOG:COG5176 GeneTree:ENSGT00550000074434 InterPro:IPR012956
Pfam:PF08143 HOGENOM:HOG000230771 HOVERGEN:HBG079164 KO:K13198
OMA:FMELSYL OrthoDB:EOG4JHCGB EMBL:BC067711 EMBL:BC155179
IPI:IPI00494960 RefSeq:NP_998400.1 UniGene:Dr.162044
Ensembl:ENSDART00000103471 GeneID:406516 KEGG:dre:406516 CTD:406516
InParanoid:Q6NW62 NextBio:20818091 Uniprot:Q6NW62
Length = 352
Score = 241 (89.9 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 51/136 (37%), Positives = 80/136 (58%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
+K R+ IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D +EE +R
Sbjct: 57 IKLKERILIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKNKEEELR 116
Query: 201 --GKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREL 258
G+P Y HL+ LH+ +E PV R+ A E ++ L P D D + +Q E+
Sbjct: 117 KNGEPKYAHLSMELHVFIEVFAPVPDAYMRMAHAMEEIKKFLFP-DMMDDICQ-EQFMEM 174
Query: 259 ALLNGTLREEGSPMSG 274
LNG G G
Sbjct: 175 KFLNGGQEHGGRGRGG 190
Score = 60 (26.2 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRV 72
+ KYL +LLAER L+P +A +L++ EI ++
Sbjct: 4 ENKYLPQLLAERDSLDPSFT---HAMKLISAEIEKI 36
>UNIPROTKB|F1NLF2 [details] [associations]
symbol:KHDRBS1 "KH domain-containing, RNA-binding, signal
transduction-associated protein 1" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005070 "SH3/SH2
adaptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046831 "regulation of RNA export from nucleus" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0045892 GO:GO:0016020
GO:GO:0003723 GO:GO:0007166 GeneTree:ENSGT00550000074434
IPI:IPI00603250 GO:GO:0046831 OMA:FMELSYL EMBL:AADN02043780
EMBL:AADN02043781 EMBL:AADN02043782 Ensembl:ENSGALT00000005175
Uniprot:F1NLF2
Length = 433
Score = 245 (91.3 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 56/134 (41%), Positives = 82/134 (61%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+EE +R G P
Sbjct: 142 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 201
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN LH+ +E P A + A E ++ L P D D ++Q L EL+ LNG
Sbjct: 202 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP-DMMDDICQEQFL-ELSYLNG 259
Query: 264 T---LREEGSPMSG 274
R G P+ G
Sbjct: 260 VPEPTRGRGGPVRG 273
Score = 59 (25.8 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRV 72
+ KYL EL+AE+ L+P +A +LL+ EI ++
Sbjct: 82 ENKYLPELMAEKDSLDPSFT---HAMQLLSAEIEKI 114
>UNIPROTKB|Q8UUW7 [details] [associations]
symbol:KHDRBS1 "KH domain-containing, RNA-binding, signal
transduction-associated protein 1" species:9031 "Gallus gallus"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=IDA] [GO:0007166 "cell
surface receptor signaling pathway" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0016020 "membrane" evidence=ISS] [GO:0045948
"positive regulation of translational initiation" evidence=ISS]
[GO:0046833 "positive regulation of RNA export from nucleus"
evidence=ISS] [GO:0046831 "regulation of RNA export from nucleus"
evidence=ISS] [GO:0005070 "SH3/SH2 adaptor activity" evidence=ISS]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0045892 GO:GO:0000086
GO:GO:0016020 GO:GO:0005070 GO:GO:0006351 GO:GO:0003723
GO:GO:0007166 eggNOG:COG5176 EMBL:AY057837 IPI:IPI00603250
RefSeq:NP_989561.1 UniGene:Gga.3874 ProteinModelPortal:Q8UUW7
SMR:Q8UUW7 STRING:Q8UUW7 PRIDE:Q8UUW7 GeneID:374071 KEGG:gga:374071
CTD:10657 HOGENOM:HOG000230771 HOVERGEN:HBG079164 InParanoid:Q8UUW7
KO:K13198 NextBio:20813592 GO:GO:0046831 Uniprot:Q8UUW7
Length = 433
Score = 245 (91.3 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 56/134 (41%), Positives = 82/134 (61%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+EE +R G P
Sbjct: 142 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 201
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN LH+ +E P A + A E ++ L P D D ++Q L EL+ LNG
Sbjct: 202 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP-DMMDDICQEQFL-ELSYLNG 259
Query: 264 T---LREEGSPMSG 274
R G P+ G
Sbjct: 260 VPEPTRGRGGPVRG 273
Score = 57 (25.1 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRV 72
+ KYL EL+AE+ L+P +A +LL+ EI ++
Sbjct: 82 ENKYLPELMAEKDSLDPSST---HAMQLLSAEIEKI 114
Score = 41 (19.5 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 85 SGLEHASPLTSGGIFSNGGADTNGLAS 111
+G +H PL +GG + G + G A+
Sbjct: 40 AGAQHPQPLLTGGAAA-GSSGAQGPAA 65
>UNIPROTKB|J9NRH2 [details] [associations]
symbol:KHDRBS1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074434
EMBL:AAEX03001657 EMBL:AAEX03001658 Ensembl:ENSCAFT00000043112
Uniprot:J9NRH2
Length = 423
Score = 242 (90.2 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 56/134 (41%), Positives = 82/134 (61%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+EE +R G P
Sbjct: 139 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 198
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN LH+ +E P A + A E ++ L P D D ++Q L EL+ LNG
Sbjct: 199 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP-DMMDDICQEQFL-ELSYLNG 256
Query: 264 T---LREEGSPMSG 274
R G P+ G
Sbjct: 257 VPEPSRGRGVPVRG 270
Score = 58 (25.5 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRV 72
+ KYL EL+AE+ L+P +A +LL EI ++
Sbjct: 80 ENKYLPELMAEKDSLDPSFT---HAMQLLTAEIEKI 112
>UNIPROTKB|Q29RQ2 [details] [associations]
symbol:KHDRBS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046831 "regulation of RNA export from nucleus"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005070 "SH3/SH2 adaptor
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0045892 GO:GO:0016020
GO:GO:0003723 GO:GO:0007166 eggNOG:COG5176
GeneTree:ENSGT00550000074434 CTD:10657 HOGENOM:HOG000230771
HOVERGEN:HBG079164 KO:K13198 GO:GO:0046831 OMA:FMELSYL
OrthoDB:EOG4JHCGB EMBL:DAAA02006245 EMBL:BC114075 IPI:IPI00691512
RefSeq:NP_001039907.1 UniGene:Bt.23430 SMR:Q29RQ2 STRING:Q29RQ2
Ensembl:ENSBTAT00000016581 GeneID:538775 KEGG:bta:538775
InParanoid:Q29RQ2 NextBio:20877572 Uniprot:Q29RQ2
Length = 443
Score = 242 (90.2 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 56/134 (41%), Positives = 82/134 (61%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+EE +R G P
Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN LH+ +E P A + A E ++ L P D D ++Q L EL+ LNG
Sbjct: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP-DMMDDICQEQFL-ELSYLNG 276
Query: 264 T---LREEGSPMSG 274
R G P+ G
Sbjct: 277 VPEPSRGRGVPVRG 290
Score = 58 (25.5 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRV 72
+ KYL EL+AE+ L+P +A +LL EI ++
Sbjct: 100 ENKYLPELMAEKDSLDPSFT---HAMQLLTAEIEKI 132
>UNIPROTKB|Q07666 [details] [associations]
symbol:KHDRBS1 "KH domain-containing, RNA-binding, signal
transduction-associated protein 1" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017124 "SH3 domain
binding" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0070618 "Grb2-Sos complex" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=ISS]
[GO:0046831 "regulation of RNA export from nucleus" evidence=ISS]
[GO:0016020 "membrane" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IDA] [GO:0005070 "SH3/SH2 adaptor activity" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0046833 "positive regulation of
RNA export from nucleus" evidence=IDA] [GO:0045948 "positive
regulation of translational initiation" evidence=IDA] [GO:0031647
"regulation of protein stability" evidence=IDA] [GO:0007050 "cell
cycle arrest" evidence=TAS] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0006397 "mRNA processing" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0008283 "cell proliferation"
evidence=TAS] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0045892
GO:GO:0000086 GO:GO:0016020 GO:GO:0003677 EMBL:CH471059
GO:GO:0008283 GO:GO:0006397 GO:GO:0007050 GO:GO:0006351
GO:GO:0003723 GO:GO:0007166 PDB:3QHE PDBsum:3QHE eggNOG:COG5176
EMBL:AL445248 CTD:10657 HOGENOM:HOG000230771 HOVERGEN:HBG079164
KO:K13198 GO:GO:0046831 EMBL:M88108 EMBL:U78971 EMBL:AK091346
EMBL:AL139249 EMBL:BC000717 EMBL:BC010132 EMBL:BC019109
IPI:IPI00008575 IPI:IPI00082310 IPI:IPI00385834 PIR:A38219
RefSeq:NP_001258807.1 RefSeq:NP_006550.1 UniGene:Hs.445893 PDB:2XA6
PDBsum:2XA6 ProteinModelPortal:Q07666 SMR:Q07666 DIP:DIP-29007N
IntAct:Q07666 MINT:MINT-102826 STRING:Q07666 PhosphoSite:Q07666
DMDM:62511098 PaxDb:Q07666 PRIDE:Q07666 DNASU:10657
Ensembl:ENST00000327300 Ensembl:ENST00000492989 GeneID:10657
KEGG:hsa:10657 UCSC:uc001bua.1 UCSC:uc001bub.3
GeneCards:GC01P032479 HGNC:HGNC:18116 HPA:CAB005355 MIM:602489
neXtProt:NX_Q07666 PharmGKB:PA30092 InParanoid:Q07666 OMA:FMELSYL
OrthoDB:EOG4JHCGB PhylomeDB:Q07666 BindingDB:Q07666
ChEMBL:CHEMBL1795190 ChiTaRS:KHDRBS1 EvolutionaryTrace:Q07666
GenomeRNAi:10657 NextBio:40517 PMAP-CutDB:Q07666
ArrayExpress:Q07666 Bgee:Q07666 CleanEx:HS_KHDRBS1
Genevestigator:Q07666 GermOnline:ENSG00000121774 Uniprot:Q07666
Length = 443
Score = 242 (90.2 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 56/134 (41%), Positives = 82/134 (61%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+EE +R G P
Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN LH+ +E P A + A E ++ L P D D ++Q L EL+ LNG
Sbjct: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP-DMMDDICQEQFL-ELSYLNG 276
Query: 264 T---LREEGSPMSG 274
R G P+ G
Sbjct: 277 VPEPSRGRGVPVRG 290
Score = 58 (25.5 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRV 72
+ KYL EL+AE+ L+P +A +LL EI ++
Sbjct: 100 ENKYLPELMAEKDSLDPSFT---HAMQLLTAEIEKI 132
>UNIPROTKB|I3LP11 [details] [associations]
symbol:LOC100739434 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0046831 "regulation of RNA export from nucleus"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005070 "SH3/SH2 adaptor
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074434
EMBL:FP325355 EMBL:FP340586 Ensembl:ENSSSCT00000031351 OMA:REEPESY
Uniprot:I3LP11
Length = 443
Score = 242 (90.2 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 56/134 (41%), Positives = 82/134 (61%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+EE +R G P
Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN LH+ +E P A + A E ++ L P D D ++Q L EL+ LNG
Sbjct: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP-DMMDDICQEQFL-ELSYLNG 276
Query: 264 T---LREEGSPMSG 274
R G P+ G
Sbjct: 277 VPEPSRGRGVPVRG 290
Score = 58 (25.5 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRV 72
+ KYL EL+AE+ L+P +A +LL EI ++
Sbjct: 100 ENKYLPELMAEKDSLDPSFT---HAMQLLTAEIEKI 132
>UNIPROTKB|F1PLD5 [details] [associations]
symbol:KHDRBS1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0046831 "regulation of RNA export from
nucleus" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005070
"SH3/SH2 adaptor activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0045892
GO:GO:0016020 GO:GO:0003723 GO:GO:0007166
GeneTree:ENSGT00550000074434 GO:GO:0046831 OMA:FMELSYL
EMBL:AAEX03001657 EMBL:AAEX03001658 Ensembl:ENSCAFT00000017162
Uniprot:F1PLD5
Length = 444
Score = 242 (90.2 bits), Expect = 5.1e-24, Sum P(2) = 5.1e-24
Identities = 56/134 (41%), Positives = 82/134 (61%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+EE +R G P
Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN LH+ +E P A + A E ++ L P D D ++Q L EL+ LNG
Sbjct: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP-DMMDDICQEQFL-ELSYLNG 276
Query: 264 T---LREEGSPMSG 274
R G P+ G
Sbjct: 277 VPEPSRGRGVPVRG 290
Score = 58 (25.5 bits), Expect = 5.1e-24, Sum P(2) = 5.1e-24
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRV 72
+ KYL EL+AE+ L+P +A +LL EI ++
Sbjct: 100 ENKYLPELMAEKDSLDPSFT---HAMQLLTAEIEKI 132
>MGI|MGI:893579 [details] [associations]
symbol:Khdrbs1 "KH domain containing, RNA binding, signal
transduction associated 1" species:10090 "Mus musculus" [GO:0003723
"RNA binding" evidence=ISO;IDA] [GO:0005070 "SH3/SH2 adaptor
activity" evidence=ISO;IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007166 "cell surface receptor signaling
pathway" evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO]
[GO:0017124 "SH3 domain binding" evidence=ISO] [GO:0032403 "protein
complex binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045948 "positive
regulation of translational initiation" evidence=ISO] [GO:0046831
"regulation of RNA export from nucleus" evidence=IDA] [GO:0046833
"positive regulation of RNA export from nucleus" evidence=ISO]
[GO:0070618 "Grb2-Sos complex" evidence=ISO] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
MGI:MGI:893579 GO:GO:0005634 GO:GO:0045892 GO:GO:0016020
GO:GO:0006351 GO:GO:0003723 GO:GO:0007049 GO:GO:0007166
eggNOG:COG5176 GeneTree:ENSGT00550000074434 CTD:10657
HOVERGEN:HBG079164 KO:K13198 GO:GO:0046831 OMA:FMELSYL
OrthoDB:EOG4JHCGB ChiTaRS:KHDRBS1 EMBL:U17961 EMBL:U17046
EMBL:AK050520 EMBL:AK152084 EMBL:AL669834 EMBL:CU210913
EMBL:BC002051 IPI:IPI00458765 PIR:I49140 PIR:S43974
RefSeq:NP_035447.3 UniGene:Mm.489797 UniGene:Mm.8256
ProteinModelPortal:Q60749 SMR:Q60749 DIP:DIP-2861N IntAct:Q60749
STRING:Q60749 PhosphoSite:Q60749 PaxDb:Q60749 PRIDE:Q60749
Ensembl:ENSMUST00000066257 Ensembl:ENSMUST00000129342 GeneID:20218
KEGG:mmu:20218 UCSC:uc008uyd.1 InParanoid:B2KG38 NextBio:297827
Bgee:Q60749 Genevestigator:Q60749 GermOnline:ENSMUSG00000028790
Uniprot:Q60749
Length = 443
Score = 237 (88.5 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 52/120 (43%), Positives = 77/120 (64%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+EE +R G P
Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN LH+ +E P A + A E ++ L P D D ++Q L EL+ LNG
Sbjct: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP-DMMDDICQEQFL-ELSYLNG 276
Score = 58 (25.5 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRV 72
+ KYL EL+AE+ L+P +A +LL+ EI ++
Sbjct: 100 ENKYLPELMAEKDSLDPSFT---HAMQLLSVEIEKI 132
>RGD|621459 [details] [associations]
symbol:Khdrbs1 "KH domain containing, RNA binding, signal
transduction associated 1" species:10116 "Rattus norvegicus"
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISO;ISS;TAS] [GO:0005070
"SH3/SH2 adaptor activity" evidence=ISO;IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007166 "cell surface receptor
signaling pathway" evidence=ISO;IDA] [GO:0009966 "regulation of
signal transduction" evidence=NAS] [GO:0016020 "membrane"
evidence=ISO;ISS] [GO:0017124 "SH3 domain binding" evidence=IDA]
[GO:0032403 "protein complex binding" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0045948 "positive regulation of translational
initiation" evidence=ISO;ISS] [GO:0046831 "regulation of RNA export
from nucleus" evidence=ISO;ISS] [GO:0046833 "positive regulation of
RNA export from nucleus" evidence=ISO;ISS] [GO:0070618 "Grb2-Sos
complex" evidence=IDA] [GO:0031647 "regulation of protein
stability" evidence=ISO] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 RGD:621459 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0000086 GO:GO:0009966
GO:GO:0032403 GO:GO:0017124 GO:GO:0006351 GO:GO:0003723
GO:GO:0007166 eggNOG:COG5176 CTD:10657 HOGENOM:HOG000230771
HOVERGEN:HBG079164 KO:K13198 GO:GO:0046831 OrthoDB:EOG4JHCGB
EMBL:AF305619 EMBL:AF393783 EMBL:BC061987 IPI:IPI00205097
RefSeq:NP_569089.1 UniGene:Rn.92906 ProteinModelPortal:Q91V33
SMR:Q91V33 IntAct:Q91V33 STRING:Q91V33 PhosphoSite:Q91V33
PRIDE:Q91V33 GeneID:117268 KEGG:rno:117268 NextBio:620165
ArrayExpress:Q91V33 Genevestigator:Q91V33 GO:GO:0070618
Uniprot:Q91V33
Length = 443
Score = 237 (88.5 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 52/120 (43%), Positives = 77/120 (64%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+EE +R G P
Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN LH+ +E P A + A E ++ L P D D ++Q L EL+ LNG
Sbjct: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP-DMMDDICQEQFL-ELSYLNG 276
Score = 58 (25.5 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRV 72
+ KYL EL+AE+ L+P +A +LL+ EI ++
Sbjct: 100 ENKYLPELMAEKDSLDPSFT---HAMQLLSVEIEKI 132
>UNIPROTKB|F1P522 [details] [associations]
symbol:QKI "Protein quaking" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 GO:GO:0003723
GeneTree:ENSGT00550000074434 EMBL:AADN02035543 EMBL:AADN02035544
IPI:IPI01017166 Ensembl:ENSGALT00000031822 ArrayExpress:F1P522
Uniprot:F1P522
Length = 186
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 55/146 (37%), Positives = 92/146 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKP 242
E + +L +A E ++ LL P
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLIP 181
>FB|FBgn0034739 [details] [associations]
symbol:CG3927 species:7227 "Drosophila melanogaster"
[GO:0003723 "RNA binding" evidence=ISM;IEA] [GO:0016607 "nuclear
speck" evidence=IDA] [GO:0046331 "lateral inhibition" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF13014 PROSITE:PS50084
SMART:SM00322 GO:GO:0016607 GO:GO:0003723 GO:GO:0046331 HSSP:Q9BW01
eggNOG:COG5176 EMBL:AY075269 ProteinModelPortal:Q8T8U7 SMR:Q8T8U7
STRING:Q8T8U7 PaxDb:Q8T8U7 PRIDE:Q8T8U7 FlyBase:FBgn0034739
InParanoid:Q8T8U7 ArrayExpress:Q8T8U7 Bgee:Q8T8U7 Uniprot:Q8T8U7
Length = 275
Score = 240 (89.5 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 55/146 (37%), Positives = 86/146 (58%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
+V +PV K+P FNF G++LGP+GNSL+R++ T C+++I+GR S++D +EE +R G P
Sbjct: 89 KVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEEELRSSGDP 148
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLN- 262
Y HL++ L + V A P AR+ A + L P D++ D + +QQ REL +N
Sbjct: 149 RYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIP-DDNDDVWHEQQ-RELMEMNP 206
Query: 263 -GTLREEGSPMSGSVSPFHNSLGMKR 287
+ G M+ S F ++G R
Sbjct: 207 KSAKKSNGLNMAPYRSNFDKAIGAIR 232
Score = 42 (19.8 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 38 EKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRV 72
+K+L++L AER +L+ P+ L+++ + RV
Sbjct: 32 QKFLADLDAERKRLSAEFPLCA---LLIDESVDRV 63
>FB|FBgn0022987 [details] [associations]
symbol:qkr54B "quaking related 54B" species:7227 "Drosophila
melanogaster" [GO:0003723 "RNA binding" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0003729 "mRNA binding" evidence=NAS]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
EMBL:AE013599 GO:GO:0005737 GO:GO:0003723
GeneTree:ENSGT00550000074434 KO:K14942 RefSeq:NP_523772.1
RefSeq:NP_725679.1 RefSeq:NP_725680.2 UniGene:Dm.667 GeneID:36966
KEGG:dme:Dmel_CG4816 CTD:36966 FlyBase:FBgn0022987 GenomeRNAi:36966
NextBio:801273 EMBL:AF096272 EMBL:AY095201 SMR:Q7KNS5
EnsemblMetazoa:FBtr0086923 EnsemblMetazoa:FBtr0086925
EnsemblMetazoa:FBtr0306248 UCSC:CG4816-RA InParanoid:Q7KNS5
OMA:AYARIAY Uniprot:Q7KNS5
Length = 428
Score = 240 (89.5 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 52/137 (37%), Positives = 81/137 (59%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGK--P 203
RV +P+ ++P FNFVG+LLGP+GNSL+R++ T C++ + GR S++D +EE +R P
Sbjct: 124 RVLVPIREHPKFNFVGKLLGPKGNSLRRLQEETLCKMTVLGRNSMRDRVKEEELRSSKDP 183
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN LH+ + P AR+ A L L P +S+D +++QLREL + +
Sbjct: 184 KYAHLNSDLHVEISTIAPPAEAYARIAYAMAELRKYLIP--DSNDIIRQEQLREL-MDST 240
Query: 264 TLREEGSPMSGSVSPFH 280
+L + + SG H
Sbjct: 241 SLNDNDNAKSGYKKTSH 257
Score = 51 (23.0 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 39 KYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTT 74
+Y+ + +AER++++ P+ A +LL EI +V T
Sbjct: 67 EYIRDCMAERNRMDRKFPI---AEKLLEGEIEKVQT 99
>FB|FBgn0022985 [details] [associations]
symbol:qkr58E-2 "quaking related 58E-2" species:7227
"Drosophila melanogaster" [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 EMBL:AE013599
GO:GO:0003723 HSSP:Q9BW01 GeneTree:ENSGT00550000074434
FlyBase:FBgn0022985 EMBL:BT021292 RefSeq:NP_523810.2
UniGene:Dm.7238 SMR:Q9W254 EnsemblMetazoa:FBtr0071828 GeneID:37562
KEGG:dme:Dmel_CG5821 UCSC:CG5821-RA CTD:37562 InParanoid:Q9W254
OMA:LRNSADA GenomeRNAi:37562 NextBio:804299 Uniprot:Q9W254
Length = 416
Score = 227 (85.0 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 50/120 (41%), Positives = 74/120 (61%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
+K + +V +P+ K FN+VG+LLGP+GNSL+R++ T+C+++I GR S+KD AREE +R
Sbjct: 126 IKLSQKVHVPI-KDKKFNYVGKLLGPKGNSLRRLQEETQCKIVILGRFSMKDRAREEELR 184
Query: 201 GKPG--YEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREL 258
Y HLN PLH+ V P AR+ A + L P + HD +++Q REL
Sbjct: 185 NSADAKYAHLNLPLHVEVSTIAPPAEAYARVAYALAEIRRYLTP--DKHDDIRQEQYREL 242
Score = 54 (24.1 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 38 EKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRV 72
+KY+ EL+ ER ++ P+ A +L+++ + RV
Sbjct: 74 QKYMQELMTERSRMENHFPL---AVKLIDEALERV 105
>UNIPROTKB|E5RJZ9 [details] [associations]
symbol:KHDRBS3 "KH domain-containing, RNA-binding, signal
transduction-associated protein 3" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR004087 SMART:SM00322 GO:GO:0005634 GO:GO:0003723
HGNC:HGNC:18117 EMBL:AC040914 EMBL:AC104371 IPI:IPI01010991
ProteinModelPortal:E5RJZ9 SMR:E5RJZ9 Ensembl:ENST00000524199
ArrayExpress:E5RJZ9 Bgee:E5RJZ9 Uniprot:E5RJZ9
Length = 265
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 62/150 (41%), Positives = 91/150 (60%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
+V IPV+++P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R G+
Sbjct: 31 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 90
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN+ LH+L+E P AR+ A E ++ L P + +D ++ QL+EL LNG
Sbjct: 91 KYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNG 148
Query: 264 TLREEGSPMSGSVSPFHNSLGMKR-AKTRG 292
P+ P + G+ A TRG
Sbjct: 149 GSENADVPVVRG-KPTLRTRGVPAPAITRG 177
>UNIPROTKB|F1RRV9 [details] [associations]
symbol:KHDRBS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
SMART:SM00322 GO:GO:0003723 OMA:ETYGEYE EMBL:CU151851
Ensembl:ENSSSCT00000006524 Uniprot:F1RRV9
Length = 300
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 62/150 (41%), Positives = 91/150 (60%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
+V IPV+++P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R G+
Sbjct: 13 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 72
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN+ LH+L+E P AR+ A E ++ L P + +D ++ QL+EL LNG
Sbjct: 73 KYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNG 130
Query: 264 TLREEGSPMSGSVSPFHNSLGMKR-AKTRG 292
P+ P + G+ A TRG
Sbjct: 131 GSENADVPVVRG-KPTLRTRGVPTPAITRG 159
>FB|FBgn0034740 [details] [associations]
symbol:nsr "novel spermatogenesis regulator" species:7227
"Drosophila melanogaster" [GO:0003723 "RNA binding"
evidence=ISM;IEA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0010608 "posttranscriptional regulation of gene expression"
evidence=IMP] [GO:0007291 "sperm individualization" evidence=IMP]
[GO:0007288 "sperm axoneme assembly" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 EMBL:AE013599 GO:GO:0016607 GO:GO:0003723
GO:GO:0007291 HSSP:Q9BW01 GeneTree:ENSGT00550000074434
GO:GO:0007288 GO:GO:0010608 RefSeq:NP_611682.1
ProteinModelPortal:Q9W224 SMR:Q9W224 MINT:MINT-834857 STRING:Q9W224
EnsemblMetazoa:FBtr0071861 GeneID:37577 KEGG:dme:Dmel_CG3875
UCSC:CG3875-RA CTD:37577 FlyBase:FBgn0034740 InParanoid:Q9W224
OrthoDB:EOG4SXKV2 PhylomeDB:Q9W224 GenomeRNAi:37577 NextBio:804376
ArrayExpress:Q9W224 Bgee:Q9W224 Uniprot:Q9W224
Length = 340
Score = 233 (87.1 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 55/151 (36%), Positives = 88/151 (58%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
+K T +V +PV K+P FNF ++LGP+GNS++R++ T C+++I+GR S++D +EE +R
Sbjct: 84 MKITQKVFVPVNKFPKFNFARKILGPKGNSVRRLKEETNCKIVIKGRSSMRDRNKEEELR 143
Query: 201 --GKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREL 258
G P Y HL++ L + V A P AR+ A + L P D++ D + +QQ REL
Sbjct: 144 SSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIP-DDNDDVWHEQQ-REL 201
Query: 259 ALLN--GTLREEGSPMSGSVSPFHNSLGMKR 287
+N + G M+ S F ++G R
Sbjct: 202 MEMNPESAKKSNGLNMAPYRSIFDKTIGGNR 232
Score = 37 (18.1 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 38 EKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRV 72
+K+L++L ER +L+ P+ L+++ + RV
Sbjct: 32 QKFLADLDEERKRLSAEFPLCA---LLIDESVDRV 63
>UNIPROTKB|E5RG12 [details] [associations]
symbol:KHDRBS3 "KH domain-containing, RNA-binding, signal
transduction-associated protein 3" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
SMART:SM00322 GO:GO:0003723 HGNC:HGNC:18117 EMBL:AC040914
EMBL:AC104371 IPI:IPI00980277 ProteinModelPortal:E5RG12 SMR:E5RG12
Ensembl:ENST00000517394 ArrayExpress:E5RG12 Bgee:E5RG12
Uniprot:E5RG12
Length = 161
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 55/120 (45%), Positives = 81/120 (67%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
+V IPV+++P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R G+
Sbjct: 32 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 91
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN+ LH+L+E P AR+ A E ++ L P + +D ++ QL+EL LNG
Sbjct: 92 KYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNG 149
>UNIPROTKB|I3LAN7 [details] [associations]
symbol:LOC100625959 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 SMART:SM00322 GO:GO:0003723
GeneTree:ENSGT00550000074434 Ensembl:ENSSSCT00000023135 OMA:PEMNDEI
Uniprot:I3LAN7
Length = 151
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 55/120 (45%), Positives = 81/120 (67%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
+V IPV+++P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R G+
Sbjct: 6 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 65
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN+ LH+L+E P AR+ A E ++ L P + +D ++ QL+EL LNG
Sbjct: 66 KYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNG 123
>ZFIN|ZDB-GENE-000210-25 [details] [associations]
symbol:khdrbs1a "KH domain containing, RNA binding,
signal transduction associated 1a" species:7955 "Danio rerio"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
ZFIN:ZDB-GENE-000210-25 GO:GO:0003723 EMBL:CR376783
GeneTree:ENSGT00550000074434 HOGENOM:HOG000230771
HOVERGEN:HBG079164 EMBL:BC067717 IPI:IPI00504880 RefSeq:NP_571000.1
UniGene:Dr.153239 STRING:Q6NW56 Ensembl:ENSDART00000074787
GeneID:30082 KEGG:dre:30082 CTD:30082 InParanoid:Q6NW56 OMA:ADTEYYD
NextBio:20806567 Uniprot:Q6NW56
Length = 370
Score = 219 (82.2 bits), Expect = 8.5e-22, Sum P(2) = 8.5e-22
Identities = 51/144 (35%), Positives = 80/144 (55%)
Query: 135 SSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPA 194
+S + VK RV IPV++YP FNFVG++LGP+G+++KR++ T ++ + G+GS++D
Sbjct: 63 ASKSVRVKE--RVLIPVKQYPRFNFVGKILGPQGSTIKRLQEDTGAKISVLGKGSMRDKN 120
Query: 195 REEMMR--GKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKK 252
+EE +R G P Y HL LH+ +E P+ R+ A + ++ L PV E D
Sbjct: 121 KEEELRKGGDPKYAHLGMELHVHIEVFAPIPDCYLRMAHAMDEVKKFLMPV-EGMDEMHP 179
Query: 253 QQLRELALLNGT--LREEGSPMSG 274
+ LNG + G M G
Sbjct: 180 DAFMDPGFLNGAQDMSGHGRGMPG 203
Score = 56 (24.8 bits), Expect = 8.5e-22, Sum P(2) = 8.5e-22
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 39 KYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRV 72
KYL ELLAE+ L+ +A +LL+ EI RV
Sbjct: 16 KYLPELLAEKDSLDSSFT---HAMKLLSAEIERV 46
>TAIR|locus:2176222 [details] [associations]
symbol:AT5G51300 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=NAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=RCA] InterPro:IPR000504
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
PROSITE:PS50102 PROSITE:PS50158 SMART:SM00322 SMART:SM00343
SMART:SM00360 EMBL:CP002688 GO:GO:0008380 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723 Gene3D:4.10.60.10
SUPFAM:SSF57756 HSSP:Q9BW01 KO:K13095 EMBL:AB023044 OMA:GDGPSHE
EMBL:AY142629 EMBL:AK316802 EMBL:AK317057 IPI:IPI00537668
RefSeq:NP_001032055.1 RefSeq:NP_199943.1 RefSeq:NP_851169.1
UniGene:At.22924 ProteinModelPortal:Q9LU44 SMR:Q9LU44 IntAct:Q9LU44
STRING:Q9LU44 PRIDE:Q9LU44 EnsemblPlants:AT5G51300.1
EnsemblPlants:AT5G51300.2 EnsemblPlants:AT5G51300.3 GeneID:835204
KEGG:ath:AT5G51300 TAIR:At5g51300 InParanoid:Q9LU44
PhylomeDB:Q9LU44 ProtClustDB:CLSN2687224 Genevestigator:Q9LU44
Uniprot:Q9LU44
Length = 804
Score = 262 (97.3 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 55/120 (45%), Positives = 84/120 (70%)
Query: 149 IPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHL 208
IP++++P +NF+G ++GPRGN+ KR+E T +++IRG+GS+K+ R + +
Sbjct: 247 IPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKE-GRHQQKKDLKYDPSE 305
Query: 209 NEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLREE 268
NE LH+LVEAE E ++A A ++E LL+PVDE + +K+QQLRELA LNGT+R+E
Sbjct: 306 NEDLHVLVEAETQ-EALEA----AAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDE 360
>UNIPROTKB|F1NKE9 [details] [associations]
symbol:KHDRBS3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR004087 SMART:SM00322
GO:GO:0005634 GO:GO:0003723 GeneTree:ENSGT00550000074434
OMA:ETYGEYE EMBL:AADN02037546 EMBL:AADN02037547 IPI:IPI00813297
Ensembl:ENSGALT00000026120 Uniprot:F1NKE9
Length = 327
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 54/120 (45%), Positives = 80/120 (66%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
+V IPV+++P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D +EE +R G+
Sbjct: 41 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKTKEEELRKSGEA 100
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN+ LH+L+E P AR+ A E ++ L P + +D ++ QL+EL LNG
Sbjct: 101 KYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNG 158
>FB|FBgn0022984 [details] [associations]
symbol:qkr58E-3 "quaking related 58E-3" species:7227
"Drosophila melanogaster" [GO:0003723 "RNA binding"
evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003729
"mRNA binding" evidence=NAS] [GO:0006915 "apoptotic process"
evidence=IGI;IMP;IPI] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0016607 "nuclear
speck" evidence=IDA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0006915
GO:GO:0016607 GO:GO:0003723 HSSP:Q9BW01 GO:GO:0000381
FlyBase:FBgn0022984 EMBL:AY058724 ProteinModelPortal:Q95TJ8
DIP:DIP-21348N IntAct:Q95TJ8 MINT:MINT-310636 STRING:Q95TJ8
PRIDE:Q95TJ8 InParanoid:Q95TJ8 ArrayExpress:Q95TJ8 Bgee:Q95TJ8
Uniprot:Q95TJ8
Length = 320
Score = 228 (85.3 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 50/121 (41%), Positives = 75/121 (61%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
+K T +V +PV++YP FNF G++LGP+GNSL+R++ T+C++ I+GR SI+D +EE +R
Sbjct: 81 MKITQKVFVPVKQYPKFNFTGKILGPKGNSLRRLQEETQCKIAIKGRSSIRDRNKEEQLR 140
Query: 201 --GKPGYEHLNEPLHILVEA-ELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRE 257
G P Y HL + L + V P E AR+ A + L P + +D +QLRE
Sbjct: 141 STGDPRYAHLQKDLFLEVSTVATPAECY-ARIAYALAEIRKYLIP--DKNDEVSHEQLRE 197
Query: 258 L 258
L
Sbjct: 198 L 198
Score = 37 (18.1 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 38 EKYLSELLAERHKLNPFLPV 57
+K+L++L ER +L+ P+
Sbjct: 29 QKFLADLDEERQRLSADFPL 48
>UNIPROTKB|F5H8C8 [details] [associations]
symbol:QKI "Protein quaking" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0042692
"muscle cell differentiation" evidence=IEA] [GO:0042759 "long-chain
fatty acid biosynthetic process" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 GO:GO:0007286
GO:GO:0003723 GO:GO:0042692 GO:GO:0042759 GO:GO:0042552
GO:GO:0010628 GO:GO:0001570 EMBL:AL356119 EMBL:AL031781
HGNC:HGNC:21100 ChiTaRS:QKI IPI:IPI01010211
ProteinModelPortal:F5H8C8 SMR:F5H8C8 Ensembl:ENST00000544436
ArrayExpress:F5H8C8 Bgee:F5H8C8 Uniprot:F5H8C8
Length = 100
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 42/79 (53%), Positives = 64/79 (81%)
Query: 138 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREE 197
G IV+ ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE
Sbjct: 22 GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 81
Query: 198 MMRGKPGYEHLNEPLHILV 216
RGKP +EHLNE LH+L+
Sbjct: 82 QNRGKPNWEHLNEDLHVLI 100
>FB|FBgn0034659 [details] [associations]
symbol:CG4021 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0003723 "RNA
binding" evidence=ISM;IEA] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF13014
SMART:SM00322 EMBL:AE013599 GO:GO:0016607 GO:GO:0003723
GeneTree:ENSGT00550000074434 RefSeq:NP_611610.2 UniGene:Dm.15712
ProteinModelPortal:Q9W2D0 SMR:Q9W2D0 STRING:Q9W2D0
EnsemblMetazoa:FBtr0071716 GeneID:37484 KEGG:dme:Dmel_CG4021
UCSC:CG4021-RA FlyBase:FBgn0034659 InParanoid:Q9W2D0
OrthoDB:EOG4SQVCF PhylomeDB:Q9W2D0 GenomeRNAi:37484 NextBio:803886
ArrayExpress:Q9W2D0 Bgee:Q9W2D0 Uniprot:Q9W2D0
Length = 319
Score = 220 (82.5 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 44/114 (38%), Positives = 72/114 (63%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGY 205
+V +PV +YP FNF G++LGP+GNSL+R++ T+C++ ++GR S++D +EE +R P Y
Sbjct: 87 KVFVPVNQYPKFNFAGKILGPKGNSLRRLQEETQCKIALKGRSSMRDRNKEEELRSDPRY 146
Query: 206 EHLNEPLHILVEA-ELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREL 258
HL + L + V +P E +R+ A + L P +++D +QLREL
Sbjct: 147 AHLQKNLFLEVSTVAIPAEC-HSRIAYALAEIRKYLIP--DNNDEVSHEQLREL 197
Score = 37 (18.1 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 38 EKYLSELLAERHKLNPFLPV 57
+K+L++L ER +L+ P+
Sbjct: 30 QKFLADLDEERQRLSAEFPL 49
>RGD|620645 [details] [associations]
symbol:Sf1 "splicing factor 1" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0006917 "induction of apoptosis"
evidence=NAS] [GO:0022402 "cell cycle process" evidence=ISO]
[GO:0030238 "male sex determination" evidence=ISO] [GO:0033327
"Leydig cell differentiation" evidence=ISO] [GO:0048662 "negative
regulation of smooth muscle cell proliferation" evidence=IMP]
[GO:0050810 "regulation of steroid biosynthetic process"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:620645 GO:GO:0006917 GO:GO:0033327 GO:GO:0050810
GO:GO:0005681 GO:GO:0003723 GO:GO:0048662 HSSP:Q9BW01
eggNOG:COG5176 GO:GO:0022402 GO:GO:0030238 HOGENOM:HOG000237321
OrthoDB:EOG4VHK6F IPI:IPI00558327 EMBL:AF079873 UniGene:Rn.1074
UniGene:Rn.220071 STRING:O88629 UCSC:RGD:620645 InParanoid:O88629
ArrayExpress:O88629 Genevestigator:O88629 Uniprot:O88629
Length = 173
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 55/125 (44%), Positives = 80/125 (64%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGK--P 203
+V IP ++YP NFVG L+GPRGN+LK +E +++IRG+GS+K+ + G+ P
Sbjct: 28 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE-GKVGRKDGQMLP 86
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
G + EPLH LV A +E V + Q R IL+ ++ ++ +D +K QLRELA LNG
Sbjct: 87 GED---EPLHALVTANT-MENVKKAVEQIRNILKQGIETPEDQNDL-RKMQLRELARLNG 141
Query: 264 TLREE 268
TLRE+
Sbjct: 142 TLRED 146
>CGD|CAL0004717 [details] [associations]
symbol:orf19.329 species:5476 "Candida albicans" [GO:0000243
"commitment complex" evidence=IEA] [GO:0045131 "pre-mRNA branch
point binding" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084
PROSITE:PS50158 SMART:SM00322 SMART:SM00343 CGD:CAL0004717
GO:GO:0008380 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0005681 GO:GO:0003723 Gene3D:4.10.60.10 EMBL:AACQ01000027
EMBL:AACQ01000026 RefSeq:XP_720024.1 RefSeq:XP_720156.1 HSSP:Q9BW01
ProteinModelPortal:Q5AED9 STRING:Q5AED9 GeneID:3638211
GeneID:3638361 KEGG:cal:CaO19.329 KEGG:cal:CaO19.7961
eggNOG:COG5176 KO:K13095 Uniprot:Q5AED9
Length = 455
Score = 239 (89.2 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 51/127 (40%), Positives = 83/127 (65%)
Query: 143 RTI-RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRG 201
RT+ R+ +PV+ YP+ NFVG L+GPRGN+LK+++ + R+ IRG+GS+K+ +
Sbjct: 147 RTVERLYVPVKDYPDINFVGFLIGPRGNTLKKLQEDSGARLQIRGKGSVKEGKSSDGFGS 206
Query: 202 KPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLL-KPVDESHDFYKKQQLRELAL 260
+ + LH+L+ A+ P++I A + EI++ L+ P + +F K+ QL+ELA+
Sbjct: 207 SQTGTDIQDDLHVLITADSPLKISKA-VKLVNEIIDKLIFSP--QGMNFMKRDQLKELAV 263
Query: 261 LNGTLRE 267
LNGTLRE
Sbjct: 264 LNGTLRE 270
>UNIPROTKB|B4DX42 [details] [associations]
symbol:SF1 "Splicing factor 1" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0022402 "cell cycle process"
evidence=IEA] [GO:0030238 "male sex determination" evidence=IEA]
[GO:0033327 "Leydig cell differentiation" evidence=IEA] [GO:0050810
"regulation of steroid biosynthetic process" evidence=IEA]
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084 PROSITE:PS50158
SMART:SM00322 SMART:SM00343 GO:GO:0033327 GO:GO:0050810
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0048662
Gene3D:4.10.60.10 GO:GO:0022402 GO:GO:0030238 EMBL:AP001462
UniGene:Hs.502829 HGNC:HGNC:12950 HOVERGEN:HBG063318 ChiTaRS:SF1
EMBL:AK301803 IPI:IPI00386118 SMR:B4DX42 STRING:B4DX42
Ensembl:ENST00000422298 UCSC:uc010rnm.2 Uniprot:B4DX42
Length = 433
Score = 238 (88.8 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 55/125 (44%), Positives = 80/125 (64%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGK--P 203
+V IP ++YP NFVG L+GPRGN+LK +E +++IRG+GS+K+ + G+ P
Sbjct: 24 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE-GKVGRKDGQMLP 82
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
G + EPLH LV A +E V + Q R IL+ ++ ++ +D +K QLRELA LNG
Sbjct: 83 GED---EPLHALVTANT-MENVKKAVEQIRNILKQGIETPEDQNDL-RKMQLRELARLNG 137
Query: 264 TLREE 268
TLRE+
Sbjct: 138 TLRED 142
>FB|FBgn0034731 [details] [associations]
symbol:CG10384 species:7227 "Drosophila melanogaster"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
SMART:SM00322 EMBL:AE013599 GO:GO:0003723
GeneTree:ENSGT00550000074434 UniGene:Dm.10916 GeneID:37567
KEGG:dme:Dmel_CG10384 FlyBase:FBgn0034731 GenomeRNAi:37567
NextBio:804326 RefSeq:NP_611673.2 ProteinModelPortal:Q9W249
SMR:Q9W249 PRIDE:Q9W249 EnsemblMetazoa:FBtr0300683 UCSC:CG10384-RA
InParanoid:Q9W249 OMA:DYHDDIR PhylomeDB:Q9W249 ArrayExpress:Q9W249
Bgee:Q9W249 Uniprot:Q9W249
Length = 470
Score = 238 (88.8 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 55/145 (37%), Positives = 82/145 (56%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
VK ++V +PV +P FNFVG+LLGP+GNS+KR++ T C++ + GRGS++D +EE +R
Sbjct: 10 VKVAVKVAVPVRDHPKFNFVGKLLGPKGNSMKRLQEDTMCKMAVLGRGSMRDRRKEEELR 69
Query: 201 GKPG--YEHLNEPLHILVEA-ELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRE 257
G Y HL E LH+ + P E AR+ A + L P + HD +++Q+ E
Sbjct: 70 GSGDSRYAHLFEDLHVEISTFAAPAE-AHARIAYALAEVRRFLVP--DYHDDIRQEQMWE 126
Query: 258 LALLNGTLREEGSPMSGSVSPFHNS 282
+ L T + S SP NS
Sbjct: 127 MQALTSTPALGAHSLEDSHSPTINS 151
>WB|WBGene00022101 [details] [associations]
symbol:Y69A2AR.32 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0010171 GO:GO:0040018 GO:GO:0003723
GeneTree:ENSGT00550000074434 EMBL:FO081818 RefSeq:NP_741340.2
ProteinModelPortal:H2L0S1 PRIDE:H2L0S1 EnsemblMetazoa:Y69A2AR.32a
GeneID:177042 KEGG:cel:CELE_Y69A2AR.32 CTD:177042
WormBase:Y69A2AR.32a OMA:PLHVYIE Uniprot:H2L0S1
Length = 384
Score = 234 (87.4 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 49/130 (37%), Positives = 75/130 (57%)
Query: 149 IPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSI------KDPAREEMMRGK 202
+PVEKYP +NFVGR+LGPRG ++K++E T CR+ +RGR S P + K
Sbjct: 77 VPVEKYPKYNFVGRILGPRGMTVKQLEKETGCRIFVRGRASTTASNPESKPNKSTPSFSK 136
Query: 203 PGYEHLN------EPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLR 256
P ++ EPLH+ +E + A++ A E+++ LL P + D K+QQL
Sbjct: 137 PSLSIISRNALTEEPLHVYIECQDTQSAAQAKMAHAVEVIQRLLSPPKDGKDELKRQQLV 196
Query: 257 ELALLNGTLR 266
+++L+NGT R
Sbjct: 197 DISLINGTYR 206
>WB|WBGene00019509 [details] [associations]
symbol:K07H8.9 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0040007 GO:GO:0002119 GO:GO:0000003 GO:GO:0003723 HSSP:Q9BW01
eggNOG:COG5176 GeneTree:ENSGT00550000074434 EMBL:FO081300
PIR:T33021 RefSeq:NP_501390.1 ProteinModelPortal:O45180 SMR:O45180
STRING:O45180 EnsemblMetazoa:K07H8.9 GeneID:177620
KEGG:cel:CELE_K07H8.9 UCSC:K07H8.9 CTD:177620 WormBase:K07H8.9
HOGENOM:HOG000016492 InParanoid:O45180 OMA:ISMADIG NextBio:897640
Uniprot:O45180
Length = 254
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 50/127 (39%), Positives = 73/127 (57%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPARE-EMM 199
V T + IPVE YP +NF+GR++GPRG + K++E T CR++IRG S K
Sbjct: 119 VTLTESIRIPVETYPTYNFIGRIIGPRGTTAKQLEKDTGCRIMIRGNHSNKMYGNALHKT 178
Query: 200 RGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELA 259
G + ++ PL ++VE P AR+ A E ++ LL P + D K++QL ELA
Sbjct: 179 HGDGSQDAIDLPLRVIVETSGPRREATARITAALETVQVLLVPPPDGRDELKRRQLVELA 238
Query: 260 LLNGTLR 266
++NGT R
Sbjct: 239 IMNGTYR 245
>UNIPROTKB|F1LM37 [details] [associations]
symbol:Sf1 "Protein Sf1" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084
PROSITE:PS50158 SMART:SM00322 SMART:SM00343 RGD:620645
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10
GeneTree:ENSGT00550000074434 IPI:IPI00558327
Ensembl:ENSRNOT00000044866 ArrayExpress:F1LM37 Uniprot:F1LM37
Length = 548
Score = 238 (88.8 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 55/125 (44%), Positives = 80/125 (64%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGK--P 203
+V IP ++YP NFVG L+GPRGN+LK +E +++IRG+GS+K+ + G+ P
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE-GKVGRKDGQMLP 197
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
G + EPLH LV A +E V + Q R IL+ ++ ++ +D +K QLRELA LNG
Sbjct: 198 GED---EPLHALVTANT-MENVKKAVEQIRNILKQGIETPEDQNDL-RKMQLRELARLNG 252
Query: 264 TLREE 268
TLRE+
Sbjct: 253 TLRED 257
>UNIPROTKB|E2RRT4 [details] [associations]
symbol:SF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001878
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098
PROSITE:PS50084 PROSITE:PS50158 SMART:SM00322 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GeneTree:ENSGT00550000074434 OMA:GDGPSHE EMBL:AAEX03011644
ProteinModelPortal:E2RRT4 Ensembl:ENSCAFT00000022618 Uniprot:E2RRT4
Length = 638
Score = 238 (88.8 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 55/125 (44%), Positives = 80/125 (64%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGK--P 203
+V IP ++YP NFVG L+GPRGN+LK +E +++IRG+GS+K+ + G+ P
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE-GKVGRKDGQMLP 197
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
G + EPLH LV A +E V + Q R IL+ ++ ++ +D +K QLRELA LNG
Sbjct: 198 GED---EPLHALVTANT-MENVKKAVEQIRNILKQGIETPEDQNDL-RKMQLRELARLNG 252
Query: 264 TLREE 268
TLRE+
Sbjct: 253 TLRED 257
>UNIPROTKB|A2VDM7 [details] [associations]
symbol:SF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050810 "regulation of steroid biosynthetic process"
evidence=IEA] [GO:0033327 "Leydig cell differentiation"
evidence=IEA] [GO:0030238 "male sex determination" evidence=IEA]
[GO:0022402 "cell cycle process" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084 PROSITE:PS50158
SMART:SM00322 SMART:SM00343 GO:GO:0033327 GO:GO:0050810
GO:GO:0046872 GO:GO:0008270 GO:GO:0005681 GO:GO:0003723
eggNOG:COG5176 KO:K13095 GeneTree:ENSGT00550000074434 GO:GO:0022402
GO:GO:0030238 CTD:7536 HOVERGEN:HBG063318 OMA:GDGPSHE
EMBL:DAAA02063538 EMBL:BC133313 IPI:IPI00729661 IPI:IPI00999378
RefSeq:NP_001075083.1 UniGene:Bt.7991 SMR:A2VDM7 STRING:A2VDM7
Ensembl:ENSBTAT00000001376 GeneID:541229 KEGG:bta:541229
NextBio:20879080 Uniprot:A2VDM7
Length = 639
Score = 238 (88.8 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 55/125 (44%), Positives = 80/125 (64%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGK--P 203
+V IP ++YP NFVG L+GPRGN+LK +E +++IRG+GS+K+ + G+ P
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE-GKVGRKDGQMLP 197
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
G + EPLH LV A +E V + Q R IL+ ++ ++ +D +K QLRELA LNG
Sbjct: 198 GED---EPLHALVTANT-MENVKKAVEQIRNILKQGIETPEDQNDL-RKMQLRELARLNG 252
Query: 264 TLREE 268
TLRE+
Sbjct: 253 TLRED 257
>UNIPROTKB|Q15637 [details] [associations]
symbol:SF1 "Splicing factor 1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0022402 "cell cycle process" evidence=IEA] [GO:0030238 "male
sex determination" evidence=IEA] [GO:0033327 "Leydig cell
differentiation" evidence=IEA] [GO:0050810 "regulation of steroid
biosynthetic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0000245 "spliceosomal complex assembly"
evidence=NAS] [GO:0005840 "ribosome" evidence=NAS] [GO:0003676
"nucleic acid binding" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0003714 "transcription corepressor activity"
evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IDA]
[GO:0000389 "mRNA 3'-splice site recognition" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001878
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098
PROSITE:PS50084 PROSITE:PS50158 SMART:SM00322 SMART:SM00343
GO:GO:0005634 GO:GO:0003714 GO:GO:0006355 GO:GO:0033327
GO:GO:0050810 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0005840 GO:GO:0048662
eggNOG:COG5176 KO:K13095 GO:GO:0022402 GO:GO:0030238 GO:GO:0000389
EMBL:AP001462 EMBL:Y08765 EMBL:Y08766 EMBL:L49345 EMBL:L49380
EMBL:D26120 EMBL:AK293753 EMBL:BC000773 EMBL:BC008080 EMBL:BC008724
EMBL:BC011657 EMBL:BC020217 EMBL:BC038446 EMBL:AJ000051
EMBL:AJ000052 IPI:IPI00294627 IPI:IPI00386114 IPI:IPI00386117
IPI:IPI00386119 IPI:IPI00386120 IPI:IPI00852591 IPI:IPI00941553
PIR:G02919 RefSeq:NP_001171501.1 RefSeq:NP_001171502.1
RefSeq:NP_004621.2 RefSeq:NP_973724.1 RefSeq:NP_973726.2
RefSeq:NP_973727.1 UniGene:Hs.502829 PDB:1K1G PDB:4FXW PDB:4FXX
PDBsum:1K1G PDBsum:4FXW PDBsum:4FXX ProteinModelPortal:Q15637
SMR:Q15637 DIP:DIP-29410N IntAct:Q15637 MINT:MINT-1582417
STRING:Q15637 DMDM:38258418 PaxDb:Q15637 PRIDE:Q15637 DNASU:7536
Ensembl:ENST00000227503 Ensembl:ENST00000334944
Ensembl:ENST00000377387 Ensembl:ENST00000377390
Ensembl:ENST00000377394 Ensembl:ENST00000433274 GeneID:7536
KEGG:hsa:7536 UCSC:uc001oaz.2 UCSC:uc001oba.2 UCSC:uc001obb.2
UCSC:uc001obc.2 UCSC:uc001obd.2 CTD:7536 GeneCards:GC11M064532
HGNC:HGNC:12950 HPA:HPA018883 MIM:601516 neXtProt:NX_Q15637
PharmGKB:PA37533 HOVERGEN:HBG063318 ChiTaRS:SF1
EvolutionaryTrace:Q15637 GenomeRNAi:7536 NextBio:29487
ArrayExpress:Q15637 Bgee:Q15637 CleanEx:HS_SF1
Genevestigator:Q15637 GermOnline:ENSG00000168066 Uniprot:Q15637
Length = 639
Score = 238 (88.8 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 55/125 (44%), Positives = 80/125 (64%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGK--P 203
+V IP ++YP NFVG L+GPRGN+LK +E +++IRG+GS+K+ + G+ P
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE-GKVGRKDGQMLP 197
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
G + EPLH LV A +E V + Q R IL+ ++ ++ +D +K QLRELA LNG
Sbjct: 198 GED---EPLHALVTANT-MENVKKAVEQIRNILKQGIETPEDQNDL-RKMQLRELARLNG 252
Query: 264 TLREE 268
TLRE+
Sbjct: 253 TLRED 257
>UNIPROTKB|F1RQR0 [details] [associations]
symbol:SF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050810 "regulation of steroid biosynthetic process"
evidence=IEA] [GO:0033327 "Leydig cell differentiation"
evidence=IEA] [GO:0030238 "male sex determination" evidence=IEA]
[GO:0022402 "cell cycle process" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084 PROSITE:PS50158
SMART:SM00322 SMART:SM00343 GO:GO:0033327 GO:GO:0050810
GO:GO:0046872 GO:GO:0008270 GO:GO:0005681 GO:GO:0003723
GeneTree:ENSGT00550000074434 GO:GO:0022402 GO:GO:0030238
OMA:GDGPSHE EMBL:FP101995 Ensembl:ENSSSCT00000014232
ArrayExpress:F1RQR0 Uniprot:F1RQR0
Length = 639
Score = 238 (88.8 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 55/125 (44%), Positives = 80/125 (64%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGK--P 203
+V IP ++YP NFVG L+GPRGN+LK +E +++IRG+GS+K+ + G+ P
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE-GKVGRKDGQMLP 197
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
G + EPLH LV A +E V + Q R IL+ ++ ++ +D +K QLRELA LNG
Sbjct: 198 GED---EPLHALVTANT-MENVKKAVEQIRNILKQGIETPEDQNDL-RKMQLRELARLNG 252
Query: 264 TLREE 268
TLRE+
Sbjct: 253 TLRED 257
>MGI|MGI:1095403 [details] [associations]
symbol:Sf1 "splicing factor 1" species:10090 "Mus musculus"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0022402
"cell cycle process" evidence=IGI] [GO:0030238 "male sex
determination" evidence=IGI] [GO:0033327 "Leydig cell
differentiation" evidence=IGI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048662 "negative regulation of smooth muscle
cell proliferation" evidence=ISO] [GO:0050810 "regulation of
steroid biosynthetic process" evidence=IGI] InterPro:IPR001878
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098
PROSITE:PS50084 PROSITE:PS50158 SMART:SM00322 SMART:SM00343
MGI:MGI:1095403 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0008380 GO:GO:0033327 GO:GO:0050810 GO:GO:0046872
GO:GO:0008270 GO:GO:0006397 GO:GO:0006351 GO:GO:0005681
GO:GO:0003723 GO:GO:0048662 Gene3D:4.10.60.10 eggNOG:COG5176
GeneTree:ENSGT00550000074434 GO:GO:0022402 GO:GO:0030238
EMBL:AC127556 HOVERGEN:HBG063318 ChiTaRS:SF1 EMBL:X80159
EMBL:X85802 EMBL:Y08907 EMBL:Y12838 EMBL:AC167245 EMBL:BC009091
EMBL:BC055370 IPI:IPI00116284 IPI:IPI00387376 IPI:IPI01008154
UniGene:Mm.256422 ProteinModelPortal:Q64213 SMR:Q64213
STRING:Q64213 PhosphoSite:Q64213 PaxDb:Q64213 PRIDE:Q64213
Ensembl:ENSMUST00000131252 HOGENOM:HOG000237321 InParanoid:Q64213
OMA:GDGPSHE Bgee:Q64213 CleanEx:MM_SF1 Genevestigator:Q64213
GermOnline:ENSMUSG00000024949 Uniprot:Q64213
Length = 653
Score = 238 (88.8 bits), Expect = 4.4e-19, P = 4.4e-19
Identities = 55/125 (44%), Positives = 80/125 (64%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGK--P 203
+V IP ++YP NFVG L+GPRGN+LK +E +++IRG+GS+K+ + G+ P
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE-GKVGRKDGQMLP 197
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
G + EPLH LV A +E V + Q R IL+ ++ ++ +D +K QLRELA LNG
Sbjct: 198 GED---EPLHALVTANT-MENVKKAVEQIRNILKQGIETPEDQNDL-RKMQLRELARLNG 252
Query: 264 TLREE 268
TLRE+
Sbjct: 253 TLRED 257
>UNIPROTKB|F1LSC3 [details] [associations]
symbol:Sf1 "Protein Sf1" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084
PROSITE:PS50158 SMART:SM00322 SMART:SM00343 RGD:620645
GO:GO:0033327 GO:GO:0050810 GO:GO:0046872 GO:GO:0008270
GO:GO:0005681 GO:GO:0003723 Gene3D:4.10.60.10
GeneTree:ENSGT00550000074434 GO:GO:0022402 GO:GO:0030238
IPI:IPI00561804 PRIDE:F1LSC3 Ensembl:ENSRNOT00000028628
ArrayExpress:F1LSC3 Uniprot:F1LSC3
Length = 653
Score = 238 (88.8 bits), Expect = 4.4e-19, P = 4.4e-19
Identities = 55/125 (44%), Positives = 80/125 (64%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGK--P 203
+V IP ++YP NFVG L+GPRGN+LK +E +++IRG+GS+K+ + G+ P
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE-GKVGRKDGQMLP 197
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
G + EPLH LV A +E V + Q R IL+ ++ ++ +D +K QLRELA LNG
Sbjct: 198 GED---EPLHALVTANT-MENVKKAVEQIRNILKQGIETPEDQNDL-RKMQLRELARLNG 252
Query: 264 TLREE 268
TLRE+
Sbjct: 253 TLRED 257
>WB|WBGene00044674 [details] [associations]
symbol:B0280.17 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0008219 "cell death" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0009792 GO:GO:0008219 GO:GO:0000003 GO:GO:0003723
eggNOG:COG5176 GeneTree:ENSGT00550000074434 EMBL:FO080148
RefSeq:NP_001040836.2 ProteinModelPortal:Q2V4X2 SMR:Q2V4X2
EnsemblMetazoa:B0280.17 GeneID:4363051 KEGG:cel:CELE_B0280.17
UCSC:B0280.17 CTD:4363051 WormBase:B0280.17 HOGENOM:HOG000020938
InParanoid:Q2V4X2 OMA:IRGKGCT NextBio:959623 Uniprot:Q2V4X2
Length = 260
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 45/122 (36%), Positives = 75/122 (61%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGY 205
+V P E N N VGRL+GPRG +++++E C++ IRG+G KD A+EE +R + G+
Sbjct: 142 KVFFPPETANNTNPVGRLIGPRGMTIRQLEKDLGCKLFIRGKGCTKDDAKEERLRERVGW 201
Query: 206 EHLNEPLHILVEAELPVE-IVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGT 264
EHL EP+H+++ E +L +++L++ L+ D K+ QL +LA++ GT
Sbjct: 202 EHLKEPIHVMISVRSDSEEAASEKLSSIKKMLQEFLEHTDSE---LKRSQLMQLAVIEGT 258
Query: 265 LR 266
L+
Sbjct: 259 LK 260
>DICTYBASE|DDB_G0293554 [details] [associations]
symbol:sf1 "CCHC-type zinc finger-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0000243 "commitment
complex" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50158 SMART:SM00322
SMART:SM00343 dictyBase:DDB_G0293554 GenomeReviews:CM000155_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0000398
EMBL:AAFI02000218 HSSP:Q9BW01 eggNOG:COG5176 KO:K13095
RefSeq:XP_629004.1 ProteinModelPortal:Q54BM5
EnsemblProtists:DDB0233391 GeneID:8629288 KEGG:ddi:DDB_G0293554
InParanoid:Q54BM5 OMA:ENDELHV GO:GO:0000243 Uniprot:Q54BM5
Length = 501
Score = 233 (87.1 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 53/133 (39%), Positives = 85/133 (63%)
Query: 142 KRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRG 201
K+T ++ IP++ +P +NF+G ++GPRGN+ KR+E + ++ IRG+GS +D G
Sbjct: 178 KKTRKIYIPIKNHPEYNFIGLIIGPRGNTQKRMEKESGAKIAIRGKGSSRD--------G 229
Query: 202 KPGYEHL--NEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELA 259
KP N+ LH+L+ A+ VD +L +A ++ + L PV+E + +K+QQLRELA
Sbjct: 230 KPTKLQFQENDELHVLLTADT----VD-QLDKAEVLVREFLIPVEEGKNEHKRQQLRELA 284
Query: 260 LLNGTLREEGSPM 272
+NGTLRE + M
Sbjct: 285 EMNGTLRERPAYM 297
>SGD|S000004106 [details] [associations]
symbol:MSL5 "Component of the commitment complex"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000243 "commitment
complex" evidence=IDA] [GO:0045131 "pre-mRNA branch point binding"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084 PROSITE:PS50158
SMART:SM00322 SMART:SM00343 InterPro:IPR013041 SGD:S000004106
GO:GO:0046872 GO:GO:0008270 EMBL:BK006945 EMBL:X89514
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 SUPFAM:SSF49348
EMBL:U53877 GO:GO:0000398 KO:K13095 GO:GO:0000243
HOGENOM:HOG000197271 OrthoDB:EOG4HQHTF EMBL:Z73288 PIR:S64953
RefSeq:NP_013217.1 PDB:3FMA PDBsum:3FMA ProteinModelPortal:Q12186
SMR:Q12186 DIP:DIP-991N IntAct:Q12186 MINT:MINT-489287
STRING:Q12186 PaxDb:Q12186 EnsemblFungi:YLR116W GeneID:850807
KEGG:sce:YLR116W CYGD:YLR116w GeneTree:ENSGT00550000074434
OMA:PPASHIS EvolutionaryTrace:Q12186 NextBio:967037
Genevestigator:Q12186 GermOnline:YLR116W GO:GO:0045131
Uniprot:Q12186
Length = 476
Score = 231 (86.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 49/123 (39%), Positives = 76/123 (61%)
Query: 149 IPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHL 208
IPV++YP+ NFVG LLGPRG +L++++ + C++ IRGRGS+K+ + PG +
Sbjct: 154 IPVDQYPDVNFVGLLLGPRGRTLRKLQEDSNCKIAIRGRGSVKEGKNASDL--PPGAMNF 211
Query: 209 NEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLREE 268
+PLH L+ A+ +I + +++ + P E + K+ QLRELA LNGTLRE+
Sbjct: 212 EDPLHCLIIADSEDKIQKGIKVCQNIVIKAVTSP--EGQNDLKRGQLRELAELNGTLRED 269
Query: 269 GSP 271
P
Sbjct: 270 NRP 272
>ZFIN|ZDB-GENE-030131-2492 [details] [associations]
symbol:sf1 "splicing factor 1" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50158 SMART:SM00322
SMART:SM00343 ZFIN:ZDB-GENE-030131-2492 GO:GO:0008270 GO:GO:0003723
GO:GO:0060041 eggNOG:COG5176 HOVERGEN:HBG063318 OrthoDB:EOG4VHK6F
EMBL:BC163938 IPI:IPI00902082 UniGene:Dr.132180 STRING:B3DKQ7
HOGENOM:HOG000170299 ArrayExpress:B3DKQ7 Uniprot:B3DKQ7
Length = 663
Score = 234 (87.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 55/125 (44%), Positives = 80/125 (64%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGK--P 203
+V IP ++YP NFVG L+GPRGN+LK +E +++IRG+GS+K+ + G+ P
Sbjct: 211 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECCAKIMIRGKGSVKE-GKVGRKDGQMLP 269
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
G + EPLH LV A +E V + Q R IL+ ++ ++ +D +K QLRELA LNG
Sbjct: 270 GED---EPLHALVTANT-MENVKKAVEQIRNILKQGIETPEDQNDL-RKMQLRELARLNG 324
Query: 264 TLREE 268
TLRE+
Sbjct: 325 TLRED 329
>FB|FBgn0025571 [details] [associations]
symbol:SF1 "Splicing factor 1" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISS;NAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;ISS;NAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0002121
"inter-male aggressive behavior" evidence=IMP] [GO:0007476
"imaginal disc-derived wing morphogenesis" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001878
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
PROSITE:PS50158 SMART:SM00322 SMART:SM00343 EMBL:AE014297
GO:GO:0022008 GO:GO:0008270 GO:GO:0003723 GO:GO:0002121
Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0007476 GO:GO:0071011
GO:GO:0000398 HSSP:Q9BW01 KO:K13095 GeneTree:ENSGT00550000074434
CTD:7536 ChiTaRS:SF1 OMA:PPLMPWM FlyBase:FBgn0025571 EMBL:BT031265
RefSeq:NP_524654.2 UniGene:Dm.3761 SMR:Q9VEJ1 MINT:MINT-896516
STRING:Q9VEJ1 EnsemblMetazoa:FBtr0083456 GeneID:43912
KEGG:dme:Dmel_CG5836 UCSC:CG5836-RA InParanoid:Q9VEJ1
GenomeRNAi:43912 NextBio:836343 Uniprot:Q9VEJ1
Length = 787
Score = 229 (85.7 bits), Expect = 5.7e-18, P = 5.7e-18
Identities = 51/122 (41%), Positives = 79/122 (64%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGY 205
+V IP E++P+ NFVG L+GPRGN+LK +E T +++IRG+GS+K+ + G+P
Sbjct: 394 KVLIPQEQHPDINFVGLLIGPRGNTLKAMEKDTGAKIIIRGKGSVKE-GKVGRKDGQP-L 451
Query: 206 EHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTL 265
+EPLH + A P E V + + ++++ ++ V E H+ ++ QLRELA LNGTL
Sbjct: 452 PGEDEPLHAFITAPNP-EAVRKAVDKIKDVIRQGIE-VPEGHNDLRRMQLRELAQLNGTL 509
Query: 266 RE 267
RE
Sbjct: 510 RE 511
>UNIPROTKB|K7GNY3 [details] [associations]
symbol:KHDRBS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004088
PROSITE:PS50084 GeneTree:ENSGT00550000074434 EMBL:CU151851
Ensembl:ENSSSCT00000035168 Uniprot:K7GNY3
Length = 242
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 55/137 (40%), Positives = 80/137 (58%)
Query: 159 FVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKPGYEHLNEPLHILV 216
FVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R G+ Y HLN+ LH+L+
Sbjct: 1 FVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLI 60
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLREEGSPMSGSV 276
E P AR+ A E ++ L P + +D ++ QL+EL LNG P+
Sbjct: 61 EVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNGGSENADVPVVRG- 117
Query: 277 SPFHNSLGMKR-AKTRG 292
P + G+ A TRG
Sbjct: 118 KPTLRTRGVPTPAITRG 134
>WB|WBGene00013808 [details] [associations]
symbol:sfa-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0042127 "regulation of
cell proliferation" evidence=IMP] [GO:0040020 "regulation of
meiosis" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084 PROSITE:PS50158
SMART:SM00322 SMART:SM00343 GO:GO:0009792 GO:GO:0002009
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0046872 GO:GO:0008270
GO:GO:0010171 GO:GO:0003723 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0040020
HSSP:Q9BW01 KO:K13095 GeneTree:ENSGT00550000074434 EMBL:AL117204
EMBL:AJ243905 PIR:T31502 RefSeq:NP_503033.1 UniGene:Cel.19529
ProteinModelPortal:G5EF97 SMR:G5EF97 EnsemblMetazoa:Y116A8C.32
GeneID:178486 KEGG:cel:CELE_Y116A8C.32 CTD:178486
WormBase:Y116A8C.32 OMA:ANGARCS NextBio:901328 Uniprot:G5EF97
Length = 699
Score = 224 (83.9 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 55/141 (39%), Positives = 80/141 (56%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGY 205
+V IP E++P+ NFVG L+GPRGN+LK +EA T +++IRG+GSIK+ + PG
Sbjct: 306 KVWIPQEQFPDLNFVGLLIGPRGNTLKSLEAETGAKIIIRGKGSIKEGKLTNRLGPMPGE 365
Query: 206 EHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTL 265
NEPLH V + ++ + ++++ + D + +K QLRELALLNGT
Sbjct: 366 ---NEPLHAYVTGT-DMNVIKKACEKIKQVIAEATALPDNNE--LRKLQLRELALLNGTF 419
Query: 266 REE----GSPMSGSVSPFHNS 282
R E G+ S S H S
Sbjct: 420 RPEDLANGARCSNCGSDEHKS 440
>ASPGD|ASPL0000074583 [details] [associations]
symbol:AN10615 species:162425 "Emericella nidulans"
[GO:0000349 "generation of catalytic spliceosome for first
transesterification step" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0000243 "commitment
complex" evidence=IEA] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084
PROSITE:PS50158 SMART:SM00322 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 EMBL:BN001303 Gene3D:4.10.60.10
SUPFAM:SSF57756 HOGENOM:HOG000197271 EnsemblFungi:CADANIAT00005496
OMA:PPLMPWM Uniprot:C8V9G4
Length = 554
Score = 210 (79.0 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 46/126 (36%), Positives = 75/126 (59%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGY 205
+V +PV YP NF+G L+GPRGN+LK++E + ++ IRG+GS+K+ +G+
Sbjct: 179 KVYVPVNDYPEINFIGLLIGPRGNTLKKMETESGAKIAIRGKGSVKEG------KGRSDA 232
Query: 206 EHLN---EPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLN 262
H + E LH L+ A+ ++ A+ + ++E + E + K+ QLRELA LN
Sbjct: 233 AHASNQEEDLHCLIMADTEEKVNKAKKL-VHNVIETAAS-IPEGQNELKRNQLRELAALN 290
Query: 263 GTLREE 268
GTLR++
Sbjct: 291 GTLRDD 296
>FB|FBgn0022986 [details] [associations]
symbol:qkr58E-1 "quaking related 58E-1" species:7227
"Drosophila melanogaster" [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF13014 SMART:SM00322
GO:GO:0022008 GO:GO:0003723 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:Q9BW01 eggNOG:COG5176 OrthoDB:EOG4SBCDH
EMBL:AF038584 ProteinModelPortal:O44435 SMR:O44435 PaxDb:O44435
PRIDE:O44435 FlyBase:FBgn0022986 InParanoid:O44435
ArrayExpress:O44435 Bgee:O44435 Uniprot:O44435
Length = 396
Score = 204 (76.9 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 39/115 (33%), Positives = 71/115 (61%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
+V P+++YP FNFVG++LGP+GN+L++++ T C++++ G S++D +EE +R G P
Sbjct: 116 KVLFPIKEYPKFNFVGKILGPKGNTLRQLQEETMCKMVVMGGNSMRDHGKEEELRSSGNP 175
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREL 258
Y HL+ LH+ + P R+ A + + P +++D + +QLRE+
Sbjct: 176 KYAHLSRDLHVEISTVAPPAEAYHRISYALGEIRKFMIP--DANDDIRLEQLREM 228
>POMBASE|SPCC962.06c [details] [associations]
symbol:bpb1 "zinc finger splicing factor Bpb1"
species:4896 "Schizosaccharomyces pombe" [GO:0000243 "commitment
complex" evidence=IDA] [GO:0000349 "generation of catalytic
spliceosome for first transesterification step" evidence=IDA]
[GO:0003723 "RNA binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084
PROSITE:PS50158 SMART:SM00322 SMART:SM00343 PomBase:SPCC962.06c
GO:GO:0005829 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 HSSP:Q9BW01 KO:K13095 GO:GO:0000243 EMBL:AF073779
PIR:T41653 RefSeq:NP_587871.1 ProteinModelPortal:O74555 SMR:O74555
STRING:O74555 EnsemblFungi:SPCC962.06c.1 GeneID:2538832
KEGG:spo:SPCC962.06c HOGENOM:HOG000197271 OMA:RIEEISH
OrthoDB:EOG4HQHTF NextBio:20800014 GO:GO:0000349 Uniprot:O74555
Length = 587
Score = 204 (76.9 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 47/127 (37%), Positives = 79/127 (62%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGY 205
+V +PV+ YP NF+G L+GPRG++LK +EA + ++ IRG+GS+K E R P
Sbjct: 189 KVYVPVKDYPEINFIGLLIGPRGHTLKDMEAKSGAKIAIRGKGSVK----EGKGRSDPSV 244
Query: 206 E-HLNEPLHILVEAELPVEIVDARLMQAREILEDLLKP---VDESHDFYKKQQLRELALL 261
++ E LH LV A+ + ++ A ++++++++ V E + K+ QLR+LA L
Sbjct: 245 RGNMEEDLHCLVTADS-----EDKINHAIKLIDNVIQTAASVPEGQNDLKRNQLRQLATL 299
Query: 262 NGTLREE 268
NGTLR++
Sbjct: 300 NGTLRDD 306
>UNIPROTKB|H0YAQ3 [details] [associations]
symbol:KHDRBS3 "KH domain-containing, RNA-binding, signal
transduction-associated protein 3" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] GO:GO:0005634 HGNC:HGNC:18117 EMBL:AC040914
EMBL:AC104371 Ensembl:ENST00000517859 Uniprot:H0YAQ3
Length = 196
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 51/132 (38%), Positives = 75/132 (56%)
Query: 164 LGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKPGYEHLNEPLHILVEAELP 221
LGPRGNSLKR++ T ++ I G+GS++D A+EE +R G+ Y HLN+ LH+L+E P
Sbjct: 2 LGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAP 61
Query: 222 VEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLREEGSPMSGSVSPFHN 281
AR+ A E ++ L P + +D ++ QL+EL LNG P+ P
Sbjct: 62 PAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNGGSENADVPVVRG-KPTLR 118
Query: 282 SLGMKR-AKTRG 292
+ G+ A TRG
Sbjct: 119 TRGVPAPAITRG 130
>WB|WBGene00013325 [details] [associations]
symbol:Y57G11C.36 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
EMBL:Z99281 GO:GO:0003723 eggNOG:COG5176
GeneTree:ENSGT00550000074434 RefSeq:NP_872088.1
ProteinModelPortal:Q8I4C4 SMR:Q8I4C4 EnsemblMetazoa:Y57G11C.36.1
EnsemblMetazoa:Y57G11C.36.2 EnsemblMetazoa:Y57G11C.36.3
GeneID:259844 KEGG:cel:CELE_Y57G11C.36 UCSC:Y57G11C.36.1 CTD:259844
WormBase:Y57G11C.36 HOGENOM:HOG000022069 InParanoid:Q8I4C4
OMA:HMYELMN NextBio:952632 Uniprot:Q8I4C4
Length = 380
Score = 198 (74.8 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 65/191 (34%), Positives = 97/191 (50%)
Query: 99 FSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFN 158
+S+GG N + + EI + + + SQ S G ++ TI V PVEK+P++N
Sbjct: 74 YSSGGF--NHVFNLIDKEIQKVGGNDAHDG--GSQMSGDGSMLTETIMV--PVEKFPDYN 127
Query: 159 FVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEA 218
FVGRLLGPRG + K++E +T CR+ I GR + + P + I V A
Sbjct: 128 FVGRLLGPRGTTAKQLEVTTGCRITILGR------TKRDGSSSNPDVTTGPLRVQISVPA 181
Query: 219 ELP--VEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLREEGS---PMS 273
++P +++ + + IL+ P D +D K+QQL LA +NGT + GS P S
Sbjct: 182 DMPQAAKLLKGGVGHIQAILD---VPTD-GNDELKRQQLLILANMNGTYQPRGSATSPGS 237
Query: 274 GSVS-PFHNSL 283
G PF N L
Sbjct: 238 GDYGHPFQNLL 248
>GENEDB_PFALCIPARUM|PFF1135w [details] [associations]
symbol:PFF1135w "transcription or splicing
factor-like protein, putative" species:5833 "Plasmodium falciparum"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
SMART:SM00343 GO:GO:0008380 GO:GO:0008270 GO:GO:0003723
Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K13095 EMBL:AL844505
RefSeq:XP_966218.1 ProteinModelPortal:C6KT72
EnsemblProtists:PFF1135w:mRNA GeneID:3885872 KEGG:pfa:PFF1135w
EuPathDB:PlasmoDB:PF3D7_0623600 HOGENOM:HOG000281592
ProtClustDB:CLSZ2433258 Uniprot:C6KT72
Length = 615
Score = 187 (70.9 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 40/123 (32%), Positives = 74/123 (60%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
+K+ +++IP++KYP +NF+G ++GPRG + KR+EA + ++ IRG+G++K+ + +
Sbjct: 155 IKKIRKIEIPIDKYPEYNFMGLIIGPRGCNHKRLEAESGAQISIRGKGTLKEGKKTDHQT 214
Query: 201 GKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELAL 260
+ + +HI + E VE +A ++ LL P H+ YK++ L +LAL
Sbjct: 215 EIEAA--MPKHVHIAADTEECVE-------KAVSLITPLLDPFHPLHEEYKRKGLEQLAL 265
Query: 261 LNG 263
+NG
Sbjct: 266 VNG 268
>UNIPROTKB|C6KT72 [details] [associations]
symbol:PFF1135w "Transcription or splicing factor-like
protein, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
SMART:SM00343 GO:GO:0008380 GO:GO:0008270 GO:GO:0003723
Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K13095 EMBL:AL844505
RefSeq:XP_966218.1 ProteinModelPortal:C6KT72
EnsemblProtists:PFF1135w:mRNA GeneID:3885872 KEGG:pfa:PFF1135w
EuPathDB:PlasmoDB:PF3D7_0623600 HOGENOM:HOG000281592
ProtClustDB:CLSZ2433258 Uniprot:C6KT72
Length = 615
Score = 187 (70.9 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 40/123 (32%), Positives = 74/123 (60%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
+K+ +++IP++KYP +NF+G ++GPRG + KR+EA + ++ IRG+G++K+ + +
Sbjct: 155 IKKIRKIEIPIDKYPEYNFMGLIIGPRGCNHKRLEAESGAQISIRGKGTLKEGKKTDHQT 214
Query: 201 GKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELAL 260
+ + +HI + E VE +A ++ LL P H+ YK++ L +LAL
Sbjct: 215 EIEAA--MPKHVHIAADTEECVE-------KAVSLITPLLDPFHPLHEEYKRKGLEQLAL 265
Query: 261 LNG 263
+NG
Sbjct: 266 VNG 268
>UNIPROTKB|H0YAQ1 [details] [associations]
symbol:KHDRBS3 "KH domain-containing, RNA-binding, signal
transduction-associated protein 3" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] GO:GO:0005634 HGNC:HGNC:18117 EMBL:AC040914
EMBL:AC104371 Ensembl:ENST00000524282 Uniprot:H0YAQ1
Length = 195
Score = 141 (54.7 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 41/122 (33%), Positives = 65/122 (53%)
Query: 174 VEASTECRVLIRGRGSIKDPAREEMMR--GKPGYEHLNEPLHILVEAELPVEIVDARLMQ 231
++ T ++ I G+GS++D A+EE +R G+ Y HLN+ LH+L+E P AR+
Sbjct: 2 LQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARMGH 61
Query: 232 AREILEDLLKPVDESHDFYKKQQLRELALLNGTLREEGSPMSGSVSPFHNSLGMKR-AKT 290
A E ++ L P + +D ++ QL+EL LNG P+ P + G+ A T
Sbjct: 62 ALEEIKKFLIP--DYNDEIRQAQLQELTYLNGGSENADVPVVRG-KPTLRTRGVPAPAIT 118
Query: 291 RG 292
RG
Sbjct: 119 RG 120
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.134 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 292 271 0.00098 114 3 11 22 0.39 34
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 97
No. of states in DFA: 582 (62 KB)
Total size of DFA: 171 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.53u 0.10s 23.63t Elapsed: 00:00:01
Total cpu time: 23.54u 0.11s 23.65t Elapsed: 00:00:01
Start: Mon May 20 16:48:21 2013 End: Mon May 20 16:48:22 2013