BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022785
(292 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FKT4|QKIL2_ARATH KH domain-containing protein At5g56140 OS=Arabidopsis thaliana
GN=At5g56140 PE=2 SV=1
Length = 315
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/289 (79%), Positives = 250/289 (86%), Gaps = 8/289 (2%)
Query: 8 RFMAYSLS----PSAPHSPHLPS-LRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAY 62
RFM YS S PSAP SP+ LRS SS ++QEKYLSELLAERHKL PFLPVLP+A+
Sbjct: 28 RFMTYSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAF 87
Query: 63 RLLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQ 122
RLLNQEI+RVTTLL NA+VL QSGL+H SPL SGGIF N AD NG AS+F SE S +
Sbjct: 88 RLLNQEILRVTTLLENATVLSQSGLDHPSPLASGGIFQNARADMNGWASQFPSERS--VP 145
Query: 123 SSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRV 182
SS NWL+S GSSSGLI KRTIRVDIPV+ YPNFNFVGRLLGPRGNSLKRVEAST+CRV
Sbjct: 146 SSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRV 205
Query: 183 LIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKP 242
LIRGRGSIKDP +EEMMRGKPGYEHLNEPLHILVEAELP+EIVDARLMQAREIL+DLL P
Sbjct: 206 LIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTP 265
Query: 243 VDESHDFYKKQQLRELALLNGTLREEGSPMSGSVSPFHNSLGMKRAKTR 291
++E+HD YKKQQLRELALLNGTLREEGSPMSGSVSP+ NSLGMKRAKTR
Sbjct: 266 MEETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPY-NSLGMKRAKTR 313
>sp|Q0WLR1|QKIL1_ARATH KH domain-containing protein At4g26480 OS=Arabidopsis thaliana
GN=At4g26480 PE=2 SV=1
Length = 308
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/290 (77%), Positives = 249/290 (85%), Gaps = 10/290 (3%)
Query: 8 RFMAY----SLSPSAPHSPHLPS-LRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAY 62
RF+ Y S+ PSAP SP+ LRS S +++QEKYLSELLAERHKL PFLPVLP+
Sbjct: 24 RFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHVC 83
Query: 63 RLLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQ 122
RL+NQEI+RVTTLL NA L QS +H SPL SGGIF N AD NG AS+F SE S +
Sbjct: 84 RLMNQEILRVTTLLENA--LSQSRFDHPSPLASGGIFQNSRADMNGWASQFPSERS--VS 139
Query: 123 SSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRV 182
SS A NWL+S GSSSGLIVKRTIRVDIPV+KYPN+NFVGRLLGPRGNSLKRVEAST+CRV
Sbjct: 140 SSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRV 199
Query: 183 LIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKP 242
LIRGRGSIKDP +E+MMRGKPGYEHLNEPLHILVEAELP+EIVDARLMQAREIL+DLL P
Sbjct: 200 LIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTP 259
Query: 243 VDESHDFYKKQQLRELALLNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 292
V+E+HDFYKKQQLRELALLNG+LREEGSPMSGS+SP+ NSLGMKRAKTRG
Sbjct: 260 VEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPY-NSLGMKRAKTRG 308
>sp|Q8GYR4|QKIL4_ARATH KH domain-containing protein At3g08620 OS=Arabidopsis thaliana
GN=At3g08620 PE=2 SV=1
Length = 283
Score = 277 bits (708), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 155/286 (54%), Positives = 190/286 (66%), Gaps = 9/286 (3%)
Query: 7 GRFMAYSLSPSAPHSPHLPSLRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAYRLLN 66
G + + SPS SP + R+ SS + Q Y+S+LLAE KL PF+ VLP RLLN
Sbjct: 3 GLYNYNNFSPSRAASPQI---RTPSSDVDSQ--YISQLLAEHQKLGPFMQVLPICSRLLN 57
Query: 67 QEIMRVTTLLGNASVLGQSGLEH--ASPLTSGGIFSNGGADTNGLASRFQSEISGLMQSS 124
QEI R+T ++ N L H SP+ S + SN G + E G
Sbjct: 58 QEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIG-GPHG 116
Query: 125 SAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLI 184
A W + S S VKR +R+D+PV+ YPNFNFVGRLLGPRGNSLKRVEA+T CRV I
Sbjct: 117 MAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYI 176
Query: 185 RGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVD 244
RG+GSIKDP +EE ++GKPGYEHLNE LHIL+EA+LP++IVD +L QA+EI+E+L+KPVD
Sbjct: 177 RGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVD 236
Query: 245 ESHDFYKKQQLRELALLNGTLREEGSPMSGSVSPFHNSLGMKRAKT 290
ES D+ K+QQLRELALLN LRE SGSVSPF NS MKR KT
Sbjct: 237 ESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPF-NSNAMKRPKT 281
>sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica
GN=SPIN1 PE=1 SV=1
Length = 281
Score = 274 bits (701), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 152/272 (55%), Positives = 191/272 (70%), Gaps = 15/272 (5%)
Query: 25 PSLRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLG- 83
P +RS + + Q YL+ELLAE KL PF+ VLP +LL+QEIMRV++++ N
Sbjct: 17 PQIRSNPTDVDSQ--YLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNHGFGDF 74
Query: 84 -----QSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSG 138
+S +SP NG + NGL E G Q +S +W + S S
Sbjct: 75 DRHRFRSPSPMSSPNPRSNRSGNGFSPWNGL----HQERLGFPQGTSM-DWQGAPPSPSS 129
Query: 139 LIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEM 198
+VK+ +R+D+PV+ YPNFNFVGR+LGPRGNSLKRVEAST CRV IRG+GSIKDP +E+
Sbjct: 130 HVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGKEDK 189
Query: 199 MRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREL 258
+RGKPGYEHL++PLHIL+EAE P I+DARL A+E++E+LLKPVDES DFYK+QQLREL
Sbjct: 190 LRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKRQQLREL 249
Query: 259 ALLNGTLREEGSPMSGSVSPFHNSLGMKRAKT 290
A+LN TLRE+ SP GSVSPF N GMKRAKT
Sbjct: 250 AMLNSTLRED-SPHPGSVSPFSNG-GMKRAKT 279
>sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610 OS=Arabidopsis thaliana
GN=At2g38610 PE=1 SV=1
Length = 286
Score = 271 bits (693), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 154/286 (53%), Positives = 190/286 (66%), Gaps = 21/286 (7%)
Query: 14 LSPSAPHSPHLPSLRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVT 73
SP+ SP + S+ +D +YL+ELLAE KL PF+ VLP RLLNQE+ RV+
Sbjct: 11 FSPARAASPQI-----RSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVS 65
Query: 74 TLLGNASVLGQSGLEH--ASPLTSGGIFSN----GGADTNGLASRFQSEISGLMQSSSAQ 127
++ N L H SP+ S + SN G NGL+ S G+
Sbjct: 66 GMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGM-----TM 120
Query: 128 NWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGR 187
+W + GS S VKR +R++IPV+ YPNFNFVGRLLGPRGNSLKRVEA+T CRV IRG+
Sbjct: 121 DWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGK 180
Query: 188 GSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESH 247
GSIKDP +E+ +RG+PGYEHLNE LHIL+EA+LP IV+ RL QA+EI+E+LLKPVDES
Sbjct: 181 GSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQ 240
Query: 248 DFYKKQQLRELALLN-GTLREE--GSPMSGSVSPFHNSLGMKRAKT 290
DF K+QQLRELALLN LREE G GSVSPF++S KR KT
Sbjct: 241 DFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSS--GKRPKT 284
>sp|Q8GWR3|QKIL5_ARATH KH domain-containing protein At1g09660 OS=Arabidopsis thaliana
GN=At1g09660 PE=2 SV=1
Length = 298
Score = 261 bits (668), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/294 (51%), Positives = 187/294 (63%), Gaps = 25/294 (8%)
Query: 7 GRFMAYSLS---PSAPHSPHLPSLRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAYR 63
G F Y LS S SP PS D+E+YL+ELL ER KL PFL V+PN R
Sbjct: 18 GSFFQYPLSGFRASPNRSPCPPS---------DRERYLTELLQERQKLGPFLQVMPNCCR 68
Query: 64 LLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQS 123
LLN EI RV+ S EH SP S G +NG D G + E L ++
Sbjct: 69 LLNHEIRRVS------SFPDLDRYEHGSPFRSLGQPTNGKLDLEGWSMMQAEENCHLQRA 122
Query: 124 S-----SAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEAST 178
S S W+ G + IVK+ IR+D+PV+KYP++NFVGR+LGPRGNSLKRVE +T
Sbjct: 123 SPFRGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELAT 182
Query: 179 ECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILED 238
CRV IRGRGS+KD +EE ++GKPGYEHL EPLH+L+EAELP +I+++RL A LE
Sbjct: 183 HCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLES 242
Query: 239 LLKPVDESHDFYKKQQLRELALLNGTLREEG-SP-MSGSVSPFHNSLGMKRAKT 290
LLKP+DES D YK++QL+ELA LNGTLREE SP +S +SP + KRAKT
Sbjct: 243 LLKPMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNSKRAKT 296
>sp|Q32NN2|QKIA_XENLA Protein quaking-A OS=Xenopus laevis GN=qki-a PE=1 SV=2
Length = 341
Score = 137 bits (346), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 110/172 (63%), Gaps = 1/172 (0%)
Query: 97 GIFSNGGADTNGLASRFQSEI-SGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYP 155
GIF++ + SR + ++ + M SSS + S G IV+ ++ +PV++YP
Sbjct: 36 GIFTHLERLLDEEISRVRKDMYNDTMNSSSNEKRTSELPDGIGPIVQLQEKLYVPVKEYP 95
Query: 156 NFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHIL 215
+FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L
Sbjct: 96 DFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVL 155
Query: 216 VEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
+ E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 ITVEDAQNRAELKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 207
>sp|Q5W9D5|QKI_PIG Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1
Length = 341
Score = 134 bits (336), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>sp|Q9QYS9|QKI_MOUSE Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1
Length = 341
Score = 134 bits (336), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>sp|Q96PU8|QKI_HUMAN Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1
Length = 341
Score = 134 bits (336), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>sp|Q5W9D6|QKI_HORSE Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1
Length = 341
Score = 134 bits (336), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>sp|Q7JJZ8|QKI_FELCA Protein quaking OS=Felis catus GN=QKI PE=2 SV=1
Length = 341
Score = 134 bits (336), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>sp|Q9GMY1|QKI_CANFA Protein quaking OS=Canis familiaris GN=QKI PE=2 SV=1
Length = 341
Score = 134 bits (336), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>sp|Q5W9D7|QKI_BOVIN Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1
Length = 341
Score = 134 bits (336), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>sp|Q91XU1|QKI_RAT Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2
Length = 341
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>sp|Q9YH18|QKI_CHICK Protein quaking OS=Gallus gallus GN=QKI PE=2 SV=2
Length = 340
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 108/171 (63%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + SR + ++ + S + + + G IV+ ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKKMQLMELAILNGTYRD 206
>sp|Q6IRN2|QKIB_XENLA Protein quaking-B OS=Xenopus laevis GN=qki-b PE=1 SV=1
Length = 342
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 92/130 (70%)
Query: 138 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREE 197
G IV+ ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE
Sbjct: 78 GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 137
Query: 198 MMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRE 257
RGKP +EHLNE LH+L+ E + +L +A E ++ LL P E D KK QL E
Sbjct: 138 QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 197
Query: 258 LALLNGTLRE 267
LA+LNGT R+
Sbjct: 198 LAILNGTYRD 207
>sp|Q6P104|QKIB_DANRE Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1
Length = 319
Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 105/171 (61%)
Query: 97 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPN 156
GIF++ + R + ++ + S S + G I + ++ +PV++YP+
Sbjct: 36 GIFNHLERLLDEEIGRVRKDMYNDTLNGSTDKRTSELPDAVGPIAQLQEKLYVPVKEYPD 95
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILV 216
FNFVGR+LGPRG + K++EA T C++++RG+GS++D +EE RGKP +EHLNE LH+L+
Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155
Query: 217 EAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
E + +L +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 156 TVEDSQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
>sp|O01367|HOW_DROME Protein held out wings OS=Drosophila melanogaster GN=how PE=1 SV=1
Length = 405
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 120/228 (52%), Gaps = 44/228 (19%)
Query: 40 YLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIF 99
YL++LL +R +L F V + RLL++EI RV AS+ +G++ PLT
Sbjct: 78 YLAQLLKDRKQLAAFPNVFTHVERLLDEEIARV-----RASLFQINGVKK-EPLTLP--- 128
Query: 100 SNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNF 159
G +V +V +PV ++P+FNF
Sbjct: 129 -----------------------------------EPEGSVVTMNEKVYVPVREHPDFNF 153
Query: 160 VGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAE 219
VGR+LGPRG + K++E T C++++RG+GS++D +E+ RGKP +EHL++ LH+L+ E
Sbjct: 154 VGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVE 213
Query: 220 LPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
+L QA ++ LL P E D KK+QL ELA++NGT R+
Sbjct: 214 DTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAIINGTYRD 261
>sp|Q6P0D0|QKIA_DANRE Protein quaking-A OS=Danio rerio GN=qkia PE=2 SV=2
Length = 341
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 122/232 (52%), Gaps = 46/232 (19%)
Query: 40 YLSELLAERHKLNPFLPVLPNAY----RLLNQEIMRVTTLLGNASVLGQSGLEHASPLTS 95
YL +LL E+ KL LP L + RLL++EI RV + N SV
Sbjct: 17 YLMQLLNEK-KLMTSLPNLCGIFTHLERLLDEEINRVRKDMYNDSV-------------- 61
Query: 96 GGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYP 155
NGL + E+ G IV ++ +PV++YP
Sbjct: 62 -----------NGLVDKHPLELP----------------EPVGPIVHLQEKLFVPVKEYP 94
Query: 156 NFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHIL 215
++NFVGR+LGPRG + K++EA T C++++RGR S++D +EE RGKP +EHLNE LH+L
Sbjct: 95 DYNFVGRILGPRGLTAKQLEAETGCKIMVRGRSSMRDKKKEEQNRGKPNWEHLNEDLHVL 154
Query: 216 VEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
+ E + ++ +A E ++ LL P E D KK QL ELA+LNGT R+
Sbjct: 155 ITVEDTQTRAEIKMRRAVEEVKKLLVPAAEGEDNLKKMQLMELAILNGTYRD 206
>sp|Q17339|GLD1_CAEEL Female germline-specific tumor suppressor gld-1 OS=Caenorhabditis
elegans GN=gld-1 PE=1 SV=1
Length = 463
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 117/233 (50%), Gaps = 47/233 (20%)
Query: 39 KYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGI 98
+YL++L+ E+ L F + N RLL+ EI RV L
Sbjct: 148 EYLADLVKEKKHLTLFPHMFSNVERLLDDEIGRVRVAL---------------------- 185
Query: 99 FSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFN 158
FQ+E + A G ++ T ++ +P +YP++N
Sbjct: 186 --------------FQTEFPRVELPEPA-----------GDMISITEKIYVPKNEYPDYN 220
Query: 159 FVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEA 218
FVGR+LGPRG + K++E T C++++RG+GS++D ++E RGK +EHL + LH+LV+
Sbjct: 221 FVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRGKANWEHLEDDLHVLVQC 280
Query: 219 ELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLREEGSP 271
E V +L A E ++ LL P E D K++QL ELA++NGT R SP
Sbjct: 281 EDTENRVHIKLQAALEQVKKLLIPAPEGTDELKRKQLMELAIINGTYRPMKSP 333
>sp|Q920F3|KHDR2_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Rattus norvegicus GN=Khdrbs2 PE=1 SV=1
Length = 349
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 119/232 (51%), Gaps = 53/232 (22%)
Query: 35 LDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLT 94
+ +EKYL EL+AE+ L+P +A RLL +EI +
Sbjct: 1 MGEEKYLPELMAEKDSLDP---SFVHASRLLAEEIEKF---------------------- 35
Query: 95 SGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKY 154
G R + E + S +N +K + RV IPV++Y
Sbjct: 36 ------------QGSDGRKEDEEKKYLDVISNKN------------IKLSERVLIPVKQY 71
Query: 155 PNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKPGYEHLNEPL 212
P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R G+ Y HL++ L
Sbjct: 72 PKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDEL 131
Query: 213 HILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGT 264
H+L+E P +R+ A E ++ L P + +D +++QLREL+ LNG+
Sbjct: 132 HVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLNGS 181
>sp|Q5VWX1|KHDR2_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Homo sapiens GN=KHDRBS2 PE=1 SV=1
Length = 349
Score = 110 bits (276), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 120/232 (51%), Gaps = 53/232 (22%)
Query: 35 LDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLT 94
+++EKYL EL+AE+ L+P +A RLL +EI +
Sbjct: 1 MEEEKYLPELMAEKDSLDP---SFVHASRLLAEEIEKF---------------------- 35
Query: 95 SGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKY 154
G + + E + S +N +K + RV IPV++Y
Sbjct: 36 ------------QGSDGKKEDEEKKYLDVISNKN------------IKLSERVLIPVKQY 71
Query: 155 PNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKPGYEHLNEPL 212
P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R G+ Y HL++ L
Sbjct: 72 PKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDEL 131
Query: 213 HILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGT 264
H+L+E P +R+ A E ++ L P + +D +++QLREL+ LNG+
Sbjct: 132 HVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLNGS 181
>sp|Q08BJ2|KHDR2_DANRE KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Danio rerio GN=khdrbs2 PE=2 SV=1
Length = 346
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 117/232 (50%), Gaps = 53/232 (22%)
Query: 35 LDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLT 94
+DQ+KYL EL+AE+ L+ +A RLL +EI +
Sbjct: 1 MDQDKYLPELVAEKESLDA---SFVHAMRLLAEEIEKF---------------------- 35
Query: 95 SGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKY 154
G R E+ + S +N +K + RV IPV++Y
Sbjct: 36 ------------EGDELRKDGEVKKYLDIISNKN------------IKLSERVLIPVQQY 71
Query: 155 PNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKPGYEHLNEPL 212
P FNFVG+LLGPRGNS+KR++ T ++ I G+GS++D +EE +R G+ Y HL+ L
Sbjct: 72 PKFNFVGKLLGPRGNSMKRLQEETGAKMSILGKGSMRDKGKEEELRKSGEAKYAHLSNDL 131
Query: 213 HILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGT 264
H+L+E P +R+ A E ++ L P + +D +++QLREL+ LNG+
Sbjct: 132 HVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLNGS 181
>sp|Q9WU01|KHDR2_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Mus musculus GN=Khdrbs2 PE=1 SV=1
Length = 349
Score = 107 bits (268), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 120/233 (51%), Gaps = 55/233 (23%)
Query: 35 LDQEKYLSELLAERHKLNP-FLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPL 93
+ +EKYL EL+AE+ L+P F+ +A RLL +EI +
Sbjct: 1 MGEEKYLPELMAEKDSLDPSFV----HASRLLAEEIEKF--------------------- 35
Query: 94 TSGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEK 153
G + + E + S +N +K + RV IPV++
Sbjct: 36 -------------QGSDGKKEDEEKKYLDVISNKN------------IKLSERVLIPVKQ 70
Query: 154 YPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKPGYEHLNEP 211
YP FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D +EE +R G+ Y HL++
Sbjct: 71 YPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKTKEEELRKSGEAKYAHLSDE 130
Query: 212 LHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGT 264
LH+L+E P +R+ A E ++ L P + +D +++QLREL+ LNG+
Sbjct: 131 LHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLNGS 181
>sp|Q0VFL3|KHDR2_XENTR KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Xenopus tropicalis GN=khdrbs2 PE=2 SV=1
Length = 345
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 120/232 (51%), Gaps = 53/232 (22%)
Query: 35 LDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLT 94
+++EKYL EL+AE+ L+P +A RLL++EI++ GN + L+
Sbjct: 1 MEEEKYLPELMAEKDSLDP---SFVHAMRLLDEEIVKFQDSEGNKEDGEKKYLD------ 51
Query: 95 SGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKY 154
I SN +K + RV IPV++Y
Sbjct: 52 ---IISNKN-------------------------------------IKLSERVLIPVKQY 71
Query: 155 PNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKPGYEHLNEPL 212
P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D +EE +R + + HL++ L
Sbjct: 72 PKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKIKEEELRKSDEAKHAHLSDEL 131
Query: 213 HILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGT 264
H+L+E P +R+ A E ++ L P + +D +++QLREL+ LNG+
Sbjct: 132 HVLLEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLNGS 181
>sp|Q9JLP1|KHDR3_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Rattus norvegicus GN=Khdrbs3 PE=1 SV=1
Length = 346
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 81/120 (67%), Gaps = 4/120 (3%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
+V IPV+++P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R G+
Sbjct: 59 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 118
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN+ LH+L+E P AR+ A E ++ L P + +D ++ QL+EL LNG
Sbjct: 119 KYFHLNDDLHVLIEVFAPPAEAYARMGHALEDIKKFLIP--DYNDEIRQAQLQELTYLNG 176
>sp|Q9R226|KHDR3_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Mus musculus GN=Khdrbs3 PE=1 SV=1
Length = 346
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 81/120 (67%), Gaps = 4/120 (3%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
+V IPV+++P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R G+
Sbjct: 59 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 118
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN+ LH+L+E P AR+ A E ++ L P + +D ++ QL+EL LNG
Sbjct: 119 KYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNG 176
>sp|O75525|KHDR3_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Homo sapiens GN=KHDRBS3 PE=1 SV=1
Length = 346
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 81/120 (67%), Gaps = 4/120 (3%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
+V IPV+++P FNFVG+LLGPRGNSLKR++ T ++ I G+GS++D A+EE +R G+
Sbjct: 59 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 118
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN+ LH+L+E P AR+ A E ++ L P + +D ++ QL+EL LNG
Sbjct: 119 KYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNG 176
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 37 QEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMR 71
+EKYL EL+AE+ L+ P +A RL+NQEI +
Sbjct: 2 EEKYLPELMAEKDSLD---PSFTHALRLVNQEIEK 33
>sp|Q91V33|KHDR1_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Rattus norvegicus GN=Khdrbs1 PE=1 SV=1
Length = 443
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 120/250 (48%), Gaps = 55/250 (22%)
Query: 17 SAPHSPHLPSLRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLL 76
SAP +P LP +A++ + + KYL EL+AE+ L+P +A +LL+ EI ++
Sbjct: 81 SAP-TPLLPPSATAAAKMEPENKYLPELMAEKDSLDP---SFTHAMQLLSVEIEKIQ--- 133
Query: 77 GNASVLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSS 136
G + +N+L
Sbjct: 134 -----------------------------------------KGESKKDDEENYLDLFSHK 152
Query: 137 SGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPARE 196
+ +K RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+E
Sbjct: 153 N---MKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKE 209
Query: 197 EMMR--GKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQ 254
E +R G P Y HLN LH+ +E P A + A E ++ L P + D ++Q
Sbjct: 210 EELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQ 267
Query: 255 LRELALLNGT 264
EL+ LNG
Sbjct: 268 FLELSYLNGV 277
>sp|Q07666|KHDR1_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Homo sapiens GN=KHDRBS1 PE=1 SV=1
Length = 443
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 115/246 (46%), Gaps = 54/246 (21%)
Query: 21 SPHLPSLRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNAS 80
+P LP +AS + + KYL EL+AE+ L+P +A +LL EI ++
Sbjct: 84 TPLLPPSATASVKMEPENKYLPELMAEKDSLDP---SFTHAMQLLTAEIEKIQ------- 133
Query: 81 VLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLI 140
G + +N+L +
Sbjct: 134 -------------------------------------KGDSKKDDEENYLDLFSHKN--- 153
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
+K RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+EE +R
Sbjct: 154 MKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELR 213
Query: 201 --GKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREL 258
G P Y HLN LH+ +E P A + A E ++ L P + D ++Q EL
Sbjct: 214 KGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLEL 271
Query: 259 ALLNGT 264
+ LNG
Sbjct: 272 SYLNGV 277
>sp|Q60749|KHDR1_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Mus musculus GN=Khdrbs1 PE=1 SV=2
Length = 443
Score = 98.2 bits (243), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 119/250 (47%), Gaps = 55/250 (22%)
Query: 17 SAPHSPHLPSLRSASSAILDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLL 76
SAP +P LP +A+ + + KYL EL+AE+ L+P +A +LL+ EI ++
Sbjct: 81 SAP-TPLLPPSATAAVKMEPENKYLPELMAEKDSLDP---SFTHAMQLLSVEIEKIQ--- 133
Query: 77 GNASVLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSS 136
G + +N+L
Sbjct: 134 -----------------------------------------KGESKKDDEENYLDLFSHK 152
Query: 137 SGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPARE 196
+ +K RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+E
Sbjct: 153 N---MKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKE 209
Query: 197 EMMR--GKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQ 254
E +R G P Y HLN LH+ +E P A + A E ++ L P + D ++Q
Sbjct: 210 EELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQ 267
Query: 255 LRELALLNGT 264
EL+ LNG
Sbjct: 268 FLELSYLNGV 277
>sp|Q750X2|BBP_ASHGO Branchpoint-bridging protein OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=BBP PE=3 SV=2
Length = 507
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 79/125 (63%), Gaps = 6/125 (4%)
Query: 149 IPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD-PAREEMMRGKPGYEH 207
IP+ YP NFVG LLGPRGN+LK+++ + C+++IRGRGS+K+ A ++ +G +
Sbjct: 155 IPINDYPEINFVGLLLGPRGNTLKQLQQQSGCKIVIRGRGSVKEGKAATDLPKGA---MN 211
Query: 208 LNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLRE 267
+NEPLH ++ A+ +I I++ + P E + K+ QLRELA+LNGTLRE
Sbjct: 212 MNEPLHCVISADTEEKIPLGINAVESIIIKAITSP--EGQNDLKRGQLRELAVLNGTLRE 269
Query: 268 EGSPM 272
+ P
Sbjct: 270 DNRPC 274
>sp|Q54BM5|BBP_DICDI Branchpoint-bridging protein OS=Dictyostelium discoideum GN=sf1
PE=3 SV=1
Length = 501
Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 83/128 (64%), Gaps = 15/128 (11%)
Query: 142 KRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRG 201
K+T ++ IP++ +P +NF+G ++GPRGN+ KR+E + ++ IRG+GS +D G
Sbjct: 178 KKTRKIYIPIKNHPEYNFIGLIIGPRGNTQKRMEKESGAKIAIRGKGSSRD--------G 229
Query: 202 KPGYEHL--NEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELA 259
KP N+ LH+L+ A + VD +L +A ++ + L PV+E + +K+QQLRELA
Sbjct: 230 KPTKLQFQENDELHVLLTA----DTVD-QLDKAEVLVREFLIPVEEGKNEHKRQQLRELA 284
Query: 260 LLNGTLRE 267
+NGTLRE
Sbjct: 285 EMNGTLRE 292
>sp|Q8UUW7|KHDR1_CHICK KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Gallus gallus GN=KHDRBS1 PE=2 SV=1
Length = 433
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 76/121 (62%), Gaps = 4/121 (3%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKP 203
RV IPV++YP FNFVG++LGP+GN++KR++ T ++ + G+GS++D A+EE +R G P
Sbjct: 142 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 201
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
Y HLN LH+ +E P A + A E ++ L P + D ++Q EL+ LNG
Sbjct: 202 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLNG 259
Query: 264 T 264
Sbjct: 260 V 260
>sp|Q15637|SF01_HUMAN Splicing factor 1 OS=Homo sapiens GN=SF1 PE=1 SV=4
Length = 639
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 79/129 (61%), Gaps = 16/129 (12%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGY 205
+V IP ++YP NFVG L+GPRGN+LK +E +++IRG+GS+K+ GK G
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE--------GKVGR 190
Query: 206 EH------LNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELA 259
+ +EPLH LV A +E V + Q R IL+ ++ ++ +D +K QLRELA
Sbjct: 191 KDGQMLPGEDEPLHALVTANT-MENVKKAVEQIRNILKQGIETPEDQNDL-RKMQLRELA 248
Query: 260 LLNGTLREE 268
LNGTLRE+
Sbjct: 249 RLNGTLRED 257
>sp|Q64213|SF01_MOUSE Splicing factor 1 OS=Mus musculus GN=Sf1 PE=1 SV=6
Length = 653
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 79/129 (61%), Gaps = 16/129 (12%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGY 205
+V IP ++YP NFVG L+GPRGN+LK +E +++IRG+GS+K+ GK G
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE--------GKVGR 190
Query: 206 EH------LNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELA 259
+ +EPLH LV A +E V + Q R IL+ ++ ++ +D +K QLRELA
Sbjct: 191 KDGQMLPGEDEPLHALVTANT-MENVKKAVEQIRNILKQGIETPEDQNDL-RKMQLRELA 248
Query: 260 LLNGTLREE 268
LNGTLRE+
Sbjct: 249 RLNGTLRED 257
>sp|Q5AED9|BBP_CANAL Branchpoint-bridging protein OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=BBP PE=3 SV=1
Length = 455
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 83/127 (65%), Gaps = 5/127 (3%)
Query: 143 RTI-RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRG 201
RT+ R+ +PV+ YP+ NFVG L+GPRGN+LK+++ + R+ IRG+GS+K+ +
Sbjct: 147 RTVERLYVPVKDYPDINFVGFLIGPRGNTLKKLQEDSGARLQIRGKGSVKEGKSSDGFGS 206
Query: 202 KPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLL-KPVDESHDFYKKQQLRELAL 260
+ + LH+L+ A+ P++I A + EI++ L+ P + +F K+ QL+ELA+
Sbjct: 207 SQTGTDIQDDLHVLITADSPLKISKA-VKLVNEIIDKLIFSP--QGMNFMKRDQLKELAV 263
Query: 261 LNGTLRE 267
LNGTLRE
Sbjct: 264 LNGTLRE 270
>sp|Q12186|BBP_YEAST Branchpoint-bridging protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MSL5 PE=1 SV=1
Length = 476
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 76/124 (61%), Gaps = 4/124 (3%)
Query: 149 IPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHL 208
IPV++YP+ NFVG LLGPRG +L++++ + C++ IRGRGS+K+ + PG +
Sbjct: 154 IPVDQYPDVNFVGLLLGPRGRTLRKLQEDSNCKIAIRGRGSVKEGKNASDL--PPGAMNF 211
Query: 209 NEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLREE 268
+PLH L+ A+ +I + +++ + P E + K+ QLRELA LNGTLRE+
Sbjct: 212 EDPLHCLIIADSEDKIQKGIKVCQNIVIKAVTSP--EGQNDLKRGQLRELAELNGTLRED 269
Query: 269 GSPM 272
P
Sbjct: 270 NRPC 273
>sp|Q6FW77|BBP_CANGA Branchpoint-bridging protein OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=BBP
PE=3 SV=1
Length = 465
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 149 IPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHL 208
IPV +YP NFVG LLGPRG +L++++ + C++ IRGRGS+K+ + PG
Sbjct: 140 IPVSQYPQINFVGLLLGPRGKTLRKMQEDSGCKIAIRGRGSVKEGKTSSDL--PPGAMDF 197
Query: 209 NEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTLREE 268
++PLH L+ A+ +I + +++ + P E + K+ QLRELA LNGTLRE+
Sbjct: 198 SDPLHCLIIADNEEKIENGIKACRNIVIKAVTSP--EGQNELKRGQLRELAELNGTLRED 255
Query: 269 GSPMS 273
P +
Sbjct: 256 NRPCA 260
>sp|Q6C187|BBP_YARLI Branchpoint-bridging protein OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=BBP PE=3 SV=1
Length = 605
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 79/134 (58%), Gaps = 11/134 (8%)
Query: 147 VDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD-PAREEMMRGKPGY 205
V IPV +YP+ NF+G+LLG RG +LK++E + ++ IRGRGS+K R ++ P
Sbjct: 183 VYIPVNEYPDINFIGQLLGARGKTLKKMEQESGAKICIRGRGSVKQGKGRTDI----PFQ 238
Query: 206 EHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNGTL 265
+ LH L+ +E +I AR +Q + + D V E + K+ QLRELA LNGTL
Sbjct: 239 STAEDDLHCLIISEDEEKI--ARAVQLVQQVIDTAASVPEGQNELKRSQLRELAALNGTL 296
Query: 266 REE----GSPMSGS 275
R++ G+P S S
Sbjct: 297 RDDENYGGAPQSSS 310
>sp|Q4WXV6|BBP_ASPFU Branchpoint-bridging protein OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=bbp PE=3
SV=1
Length = 566
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 82/134 (61%), Gaps = 17/134 (12%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
K +V +PV YP NF+G L+GPRGN+LK++EA + ++ IRG+GS+K+ +
Sbjct: 179 TKTQEKVYVPVNDYPEINFIGLLIGPRGNTLKKMEAESGAKIAIRGKGSVKE------GK 232
Query: 201 GKPGYEHLN---EPLHILVEAELPVEIVDARLMQAREILEDLLKP---VDESHDFYKKQQ 254
G+ H + E LH L+ A+ + ++ +A++++ ++++ + E + K+ Q
Sbjct: 233 GRSDAAHASNQEEDLHCLIMAD-----TEEKVNKAKKLVHNVIETAASIPEGQNELKRNQ 287
Query: 255 LRELALLNGTLREE 268
LRELA LNGTLR++
Sbjct: 288 LRELAALNGTLRDD 301
>sp|O74555|BBP_SCHPO Branchpoint-bridging protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=bpb1 PE=1 SV=1
Length = 587
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 80/132 (60%), Gaps = 13/132 (9%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
K +V +PV+ YP NF+G L+GPRG++LK +EA + ++ IRG+GS+K E R
Sbjct: 184 AKTQEKVYVPVKDYPEINFIGLLIGPRGHTLKDMEAKSGAKIAIRGKGSVK----EGKGR 239
Query: 201 GKPGYE-HLNEPLHILVEAELPVEIVDARLMQAREILEDLLKP---VDESHDFYKKQQLR 256
P ++ E LH LV A+ + ++ A ++++++++ V E + K+ QLR
Sbjct: 240 SDPSVRGNMEEDLHCLVTAD-----SEDKINHAIKLIDNVIQTAASVPEGQNDLKRNQLR 294
Query: 257 ELALLNGTLREE 268
+LA LNGTLR++
Sbjct: 295 QLATLNGTLRDD 306
>sp|Q8NIW7|BBP_NEUCR Branchpoint-bridging protein OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=bpb-1 PE=3 SV=1
Length = 607
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 80/134 (59%), Gaps = 17/134 (12%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
K +V +PV YP NF+G L+GPRGN+LK++E + ++ IRG+GS+K+ +
Sbjct: 194 TKTQEKVYVPVNDYPEINFIGLLIGPRGNTLKKMETESGAKIAIRGKGSVKE------GK 247
Query: 201 GKPGYEH---LNEPLHILVEAELPVEIVDARLMQAREILEDLLKP---VDESHDFYKKQQ 254
G+ H E LH L+ A+ + ++ +A++++ ++++ + E + K+ Q
Sbjct: 248 GRSDAAHSSNQEEDLHCLIMAD-----TEEKVNKAKKLIHNIIETAASIPEGQNELKRNQ 302
Query: 255 LRELALLNGTLREE 268
LRELA LNGTLR++
Sbjct: 303 LRELAALNGTLRDD 316
>sp|Q6BSP4|BBP_DEBHA Branchpoint-bridging protein OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=BBP PE=3 SV=2
Length = 518
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 14/139 (10%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
VK ++ IPV+ YP+ NFVG LLGPRGN+L++++ + R+ IRG+GS+KD
Sbjct: 160 VKTYEKIYIPVKDYPDINFVGLLLGPRGNTLRQLQEDSGARLAIRGKGSVKDGKSTSSNN 219
Query: 201 GKPGYEHL------------NEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHD 248
N+ LH+++ ++ +I A + + I + + PV ++
Sbjct: 220 DDDDSNSSLSFSNPNLNSSGNDDLHVVITSDSQSKIAKAIKLTNQVIEKAISSPVGQND- 278
Query: 249 FYKKQQLRELALLNGTLRE 267
K+ QLRELA+LNGTLRE
Sbjct: 279 -LKRGQLRELAILNGTLRE 296
>sp|P0CO44|BBP_CRYNJ Branchpoint-bridging protein OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=BBP PE=3 SV=1
Length = 546
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGY 205
+V IPV+++P NF G L+GPRGNSLK++E + ++ IRG+GS+K+ +G+ G
Sbjct: 249 KVYIPVKEFPEINFFGLLVGPRGNSLKKMERESGAKISIRGKGSVKE------GKGRAGN 302
Query: 206 --EHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
+ + LH L+ A+ ++ + + I P E + +K+ QLRELA LNG
Sbjct: 303 FPQDEEDELHCLITADDESKVKTCVALINKVIETAASTP--EGENDHKRNQLRELASLNG 360
Query: 264 TLREE 268
TLR++
Sbjct: 361 TLRDD 365
>sp|P0CO45|BBP_CRYNB Branchpoint-bridging protein OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=BBP PE=3 SV=1
Length = 546
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 146 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGY 205
+V IPV+++P NF G L+GPRGNSLK++E + ++ IRG+GS+K+ +G+ G
Sbjct: 249 KVYIPVKEFPEINFFGLLVGPRGNSLKKMERESGAKISIRGKGSVKE------GKGRAGN 302
Query: 206 --EHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
+ + LH L+ A+ ++ + + I P E + +K+ QLRELA LNG
Sbjct: 303 FPQDEEDELHCLITADDESKVKTCVALINKVIETAASTP--EGENDHKRNQLRELASLNG 360
Query: 264 TLREE 268
TLR++
Sbjct: 361 TLRDD 365
>sp|Q4P0H7|BBP_USTMA Branchpoint-bridging protein OS=Ustilago maydis (strain 521 / FGSC
9021) GN=BBP PE=3 SV=1
Length = 625
Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 8/125 (6%)
Query: 144 TIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKP 203
T +V +P++++P F G L+GPRGN+LK +E + ++ IRG+GS+K +GK
Sbjct: 249 TEKVYLPIKEFPEIKFFGLLVGPRGNTLKTMERQSGAKISIRGKGSVK------TGKGKM 302
Query: 204 GYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELALLNG 263
+ E +H +V A+ + + +++E E + +K+ QLRELA LNG
Sbjct: 303 DADEDEEEMHCVVTADDEASVKKC-IKLINQVIETAAS-TPEGENDHKRNQLRELAALNG 360
Query: 264 TLREE 268
TLR++
Sbjct: 361 TLRDD 365
>sp|P13230|GRP33_ARTSA Glycine-rich protein GRP33 OS=Artemia salina PE=2 SV=1
Length = 308
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 67/108 (62%), Gaps = 4/108 (3%)
Query: 141 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200
VK R +PV+++P +NF+G+LLGP G+++K+++ T ++ I GRGS++D +EE +R
Sbjct: 72 VKLVSRCCLPVDQFPKYNFLGKLLGPGGSTMKQLQDETMTKISILGRGSMRDRNKEEELR 131
Query: 201 --GKPGYEHLNEPLHI-LVEAELPVEIVDARLMQAREILEDLLKPVDE 245
G Y HLNE LHI ++ P E AR+ A ++ + P ++
Sbjct: 132 NSGDVKYAHLNEQLHIEIISIASPAE-AHARMAYALTEIKKYITPEED 178
>sp|Q09911|YAJE_SCHPO Uncharacterized protein C30D11.14c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC30D11.14c PE=4 SV=1
Length = 534
Score = 40.0 bits (92), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 17/99 (17%)
Query: 157 FNFVGRLLGPRGNSLKRVEASTECRVLIRGRGS--IKDPAREEMMRGKPGYEHLNEPLHI 214
F+ ++GP+G +K ++ T RV I+G+GS I+ E +EP+H+
Sbjct: 303 FHLRQAIVGPQGAYVKHIQQETRTRVQIKGQGSAFIEPSTNRES----------DEPIHL 352
Query: 215 LVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQ 253
+ + P I A+++ EDL+ V + + +K Q
Sbjct: 353 CIMSHDPNAIQRAKVL-----CEDLIASVHQQYKAWKSQ 386
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,531,277
Number of Sequences: 539616
Number of extensions: 4706556
Number of successful extensions: 10892
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 10719
Number of HSP's gapped (non-prelim): 181
length of query: 292
length of database: 191,569,459
effective HSP length: 116
effective length of query: 176
effective length of database: 128,974,003
effective search space: 22699424528
effective search space used: 22699424528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)