Query 022795
Match_columns 292
No_of_seqs 265 out of 964
Neff 5.7
Searched_HMMs 46136
Date Fri Mar 29 06:11:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022795.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022795hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02915 cellulose synthase A 100.0 3.9E-87 8.5E-92 696.5 21.0 270 12-292 191-480 (1044)
2 PLN02400 cellulose synthase 100.0 8E-87 1.7E-91 696.0 20.9 270 12-292 260-549 (1085)
3 PLN02436 cellulose synthase A 100.0 7.7E-87 1.7E-91 694.2 20.1 270 12-292 269-558 (1094)
4 PLN02195 cellulose synthase A 100.0 9.9E-86 2.2E-90 682.8 20.7 270 12-292 156-445 (977)
5 PLN02638 cellulose synthase A 100.0 1.5E-85 3.3E-90 686.1 20.6 270 12-292 253-542 (1079)
6 PLN02189 cellulose synthase 100.0 1.9E-85 4.1E-90 683.7 19.9 271 11-292 234-524 (1040)
7 PLN02248 cellulose synthase-li 100.0 4E-85 8.7E-90 683.0 21.5 275 12-292 266-611 (1135)
8 PLN02190 cellulose synthase-li 100.0 4.7E-85 1E-89 665.9 21.1 268 8-292 3-278 (756)
9 PLN02893 Cellulose synthase-li 100.0 2.1E-84 4.5E-89 662.8 19.0 268 7-292 5-290 (734)
10 PF03552 Cellulose_synt: Cellu 100.0 3.6E-67 7.8E-72 533.4 13.1 180 108-292 1-192 (720)
11 TIGR03030 CelA cellulose synth 99.9 1.6E-24 3.5E-29 224.7 18.3 166 29-206 56-226 (713)
12 PRK11498 bcsA cellulose syntha 99.9 1.8E-23 3.9E-28 219.6 17.5 152 28-206 184-337 (852)
13 PRK05454 glucosyltransferase M 99.5 1.6E-12 3.5E-17 135.1 18.6 167 28-206 40-216 (691)
14 COG1215 Glycosyltransferases, 99.2 6.7E-11 1.4E-15 113.9 11.8 81 105-206 53-135 (439)
15 TIGR03111 glyc2_xrt_Gpos1 puta 99.1 3.5E-10 7.6E-15 111.5 12.5 84 102-205 45-128 (439)
16 PRK14583 hmsR N-glycosyltransf 99.1 7.4E-10 1.6E-14 109.2 13.2 80 103-205 72-152 (444)
17 cd04191 Glucan_BSP_ModH Glucan 99.0 1E-09 2.2E-14 101.4 8.1 87 108-206 1-91 (254)
18 cd06421 CESA_CelA_like CESA_Ce 99.0 1.2E-09 2.6E-14 95.6 8.2 81 106-205 1-81 (234)
19 PRK11204 N-glycosyltransferase 99.0 5.8E-09 1.3E-13 101.1 13.3 81 102-205 50-131 (420)
20 cd06437 CESA_CaSu_A2 Cellulose 98.7 3.1E-08 6.7E-13 87.7 8.2 84 106-205 1-84 (232)
21 TIGR03472 HpnI hopanoid biosyn 98.7 9.6E-08 2.1E-12 92.1 11.9 52 103-160 38-89 (373)
22 cd06439 CESA_like_1 CESA_like_ 98.7 2E-08 4.4E-13 89.4 5.6 82 102-205 25-106 (251)
23 TIGR03469 HonB hopene-associat 98.7 2E-07 4.2E-12 90.4 12.4 55 102-161 36-90 (384)
24 cd06435 CESA_NdvC_like NdvC_li 98.6 1.7E-07 3.6E-12 82.8 8.4 80 109-206 1-80 (236)
25 PRK14716 bacteriophage N4 adso 98.6 7.3E-07 1.6E-11 90.2 12.7 83 103-206 63-147 (504)
26 cd06427 CESA_like_2 CESA_like_ 98.5 3.2E-07 6.9E-12 82.1 7.9 51 106-160 1-51 (241)
27 PRK11234 nfrB bacteriophage N4 98.5 1.2E-06 2.5E-11 92.3 12.0 85 102-207 59-145 (727)
28 cd02520 Glucosylceramide_synth 98.4 5.7E-07 1.2E-11 78.0 7.0 49 106-160 1-49 (196)
29 cd06438 EpsO_like EpsO protein 98.4 7.1E-07 1.5E-11 76.5 6.6 43 110-156 1-43 (183)
30 cd04190 Chitin_synth_C C-termi 98.3 4.5E-07 9.7E-12 82.1 3.3 41 110-153 1-49 (244)
31 cd04195 GT2_AmsE_like GT2_AmsE 98.2 3.1E-06 6.8E-11 72.6 7.0 77 109-205 1-77 (201)
32 cd04196 GT_2_like_d Subfamily 98.2 3.4E-06 7.3E-11 72.4 7.1 47 109-161 1-47 (214)
33 cd04184 GT2_RfbC_Mx_like Myxoc 98.2 6E-06 1.3E-10 70.7 8.4 51 106-161 1-51 (202)
34 PTZ00260 dolichyl-phosphate be 98.2 1.9E-05 4.2E-10 75.6 11.9 55 103-161 67-127 (333)
35 PF13641 Glyco_tranf_2_3: Glyc 98.2 2.5E-07 5.3E-12 81.1 -1.1 78 106-205 1-83 (228)
36 COG0463 WcaA Glycosyltransfera 98.1 5.3E-06 1.1E-10 66.1 5.5 52 105-162 2-53 (291)
37 PRK15489 nfrB bacteriophage N4 98.0 3.8E-05 8.3E-10 80.6 11.2 46 102-153 67-116 (703)
38 cd04192 GT_2_like_e Subfamily 98.0 9.8E-06 2.1E-10 70.3 5.4 47 110-160 1-47 (229)
39 cd02525 Succinoglycan_BP_ExoA 97.9 3.9E-05 8.4E-10 67.4 8.3 50 107-160 1-50 (249)
40 PRK10063 putative glycosyl tra 97.9 1.8E-05 3.8E-10 72.6 6.2 51 106-160 1-52 (248)
41 PF00535 Glycos_transf_2: Glyc 97.9 5.6E-06 1.2E-10 67.1 1.8 64 109-193 1-64 (169)
42 PRK10018 putative glycosyl tra 97.9 5.4E-05 1.2E-09 71.0 8.2 44 104-153 3-46 (279)
43 PRK10073 putative glycosyl tra 97.8 3.7E-05 7.9E-10 73.4 6.7 50 105-160 5-54 (328)
44 cd06433 GT_2_WfgS_like WfgS an 97.8 6.7E-05 1.5E-09 63.1 6.7 46 109-160 1-46 (202)
45 cd04185 GT_2_like_b Subfamily 97.7 4.1E-05 8.9E-10 65.9 4.8 45 110-160 1-45 (202)
46 cd06420 GT2_Chondriotin_Pol_N 97.7 7.7E-05 1.7E-09 62.8 5.9 45 110-160 1-45 (182)
47 COG2943 MdoH Membrane glycosyl 97.7 0.0027 5.9E-08 64.6 17.7 164 28-206 63-237 (736)
48 PRK13915 putative glucosyl-3-p 97.7 9.9E-05 2.1E-09 70.0 6.9 53 104-160 29-81 (306)
49 PLN02726 dolichyl-phosphate be 97.7 0.00011 2.4E-09 66.0 6.7 54 104-161 7-60 (243)
50 cd06434 GT2_HAS Hyaluronan syn 97.6 0.00012 2.6E-09 64.3 6.0 46 107-159 1-46 (235)
51 cd06913 beta3GnTL1_like Beta 1 97.6 9.6E-05 2.1E-09 64.8 5.3 47 110-161 1-47 (219)
52 cd06423 CESA_like CESA_like is 97.6 0.00017 3.6E-09 58.1 6.1 46 110-161 1-46 (180)
53 cd04188 DPG_synthase DPG_synth 97.5 0.00014 3.1E-09 63.4 5.4 47 110-160 1-49 (211)
54 cd04179 DPM_DPG-synthase_like 97.5 0.00022 4.7E-09 60.0 6.3 48 110-161 1-48 (185)
55 cd06436 GlcNAc-1-P_transferase 97.5 0.00012 2.7E-09 63.4 4.8 44 110-160 1-44 (191)
56 cd02510 pp-GalNAc-T pp-GalNAc- 97.5 0.00016 3.4E-09 67.1 5.7 50 109-161 1-50 (299)
57 cd06442 DPM1_like DPM1_like re 97.4 0.00035 7.5E-09 60.7 6.4 46 110-160 1-46 (224)
58 cd02511 Beta4Glucosyltransfera 97.4 0.00036 7.8E-09 62.3 6.6 41 107-156 1-41 (229)
59 cd02522 GT_2_like_a GT_2_like_ 97.4 0.00026 5.5E-09 61.4 5.4 47 108-160 1-47 (221)
60 cd04186 GT_2_like_c Subfamily 97.2 0.00079 1.7E-08 54.9 5.5 46 110-161 1-46 (166)
61 PRK10714 undecaprenyl phosphat 97.0 0.0011 2.5E-08 63.2 5.7 54 105-162 5-59 (325)
62 cd04187 DPM1_like_bac Bacteria 97.0 0.0021 4.5E-08 54.4 6.6 45 110-160 1-48 (181)
63 cd00761 Glyco_tranf_GTA_type G 96.7 0.0048 1E-07 48.3 6.4 47 110-162 1-47 (156)
64 cd02526 GT2_RfbF_like RfbF is 96.4 0.0063 1.4E-07 53.3 5.6 36 110-153 1-36 (237)
65 COG1216 Predicted glycosyltran 95.4 0.041 8.9E-07 51.6 6.7 71 105-198 2-72 (305)
66 cd02514 GT13_GLCNAC-TI GT13_GL 95.0 0.11 2.4E-06 50.4 8.4 42 108-153 2-43 (334)
67 KOG2977 Glycosyltransferase [G 94.9 0.078 1.7E-06 50.6 6.7 62 107-179 68-132 (323)
68 PF03142 Chitin_synth_2: Chiti 93.9 0.14 2.9E-06 52.7 6.6 44 104-150 23-66 (527)
69 KOG2978 Dolichol-phosphate man 92.5 0.15 3.2E-06 46.3 3.8 52 106-160 3-54 (238)
70 KOG3738 Predicted polypeptide 92.1 0.22 4.7E-06 49.7 4.8 50 103-155 121-170 (559)
71 PF10111 Glyco_tranf_2_2: Glyc 85.2 2.6 5.6E-05 39.1 6.6 58 109-179 1-62 (281)
72 TIGR01556 rhamnosyltran L-rham 84.3 1.8 3.9E-05 39.5 5.0 32 114-153 2-33 (281)
73 PF13704 Glyco_tranf_2_4: Glyc 74.8 5.9 0.00013 30.3 4.5 35 120-159 3-37 (97)
74 KOG3736 Polypeptide N-acetylga 73.5 2.2 4.8E-05 44.4 2.2 50 103-155 139-188 (578)
75 PF03071 GNT-I: GNT-I family; 73.1 3.5 7.5E-05 41.6 3.4 45 104-153 91-136 (434)
76 KOG3737 Predicted polypeptide 68.8 13 0.00028 37.5 6.2 49 102-153 151-199 (603)
77 PF01580 FtsK_SpoIIIE: FtsK/Sp 52.3 74 0.0016 27.6 7.6 81 119-229 48-128 (205)
78 COG4097 Predicted ferric reduc 46.1 1.1E+02 0.0023 30.9 8.1 68 104-190 342-409 (438)
79 KOG2051 Nonsense-mediated mRNA 45.4 21 0.00046 39.7 3.6 54 204-287 1068-1122(1128)
80 KOG2547 Ceramide glucosyltrans 44.7 1.3E+02 0.0027 30.4 8.4 45 103-153 82-126 (431)
81 TIGR02584 cas_NE0113 CRISPR-as 39.9 39 0.00085 30.9 3.9 70 110-185 1-75 (209)
82 PF09623 Cas_NE0113: CRISPR-as 39.7 2.3E+02 0.0049 26.2 8.9 61 109-178 3-63 (224)
83 cd04191 Glucan_BSP_ModH Glucan 39.0 11 0.00024 34.7 0.3 23 265-291 66-88 (254)
84 PF14979 TMEM52: Transmembrane 38.7 1.3E+02 0.0027 26.3 6.6 77 58-140 15-92 (154)
85 PF03452 Anp1: Anp1; InterPro 35.6 96 0.0021 29.5 5.9 54 104-161 23-78 (269)
86 PF11712 Vma12: Endoplasmic re 35.2 71 0.0015 26.9 4.6 19 61-79 116-134 (142)
87 PLN02893 Cellulose synthase-li 30.0 32 0.0007 37.0 2.0 23 186-208 268-294 (734)
88 COG1519 KdtA 3-deoxy-D-manno-o 29.6 94 0.002 31.4 5.0 148 27-221 3-179 (419)
89 PRK11509 hydrogenase-1 operon 27.9 1.3E+02 0.0028 25.5 4.9 67 106-190 34-100 (132)
90 PF00809 Pterin_bind: Pterin b 27.4 3E+02 0.0064 24.6 7.5 90 107-230 72-163 (210)
91 cd06432 GT8_HUGT1_C_like The C 27.3 1.6E+02 0.0036 27.0 6.0 57 109-179 2-58 (248)
92 PF01644 Chitin_synth_1: Chiti 26.9 1.4E+02 0.003 26.4 5.1 40 115-157 2-55 (163)
93 cd02742 GH20_hexosaminidase Be 25.2 1.7E+02 0.0037 27.6 5.8 28 120-149 13-40 (303)
94 PF04844 Ovate: Transcriptiona 25.1 42 0.0009 24.7 1.3 38 211-248 3-51 (59)
95 PLN02189 cellulose synthase 24.7 1.5E+02 0.0033 33.3 6.0 26 184-209 500-529 (1040)
96 PF04971 Lysis_S: Lysis protei 24.4 1.5E+02 0.0033 22.5 4.2 49 38-92 14-62 (68)
97 PRK13964 coaD phosphopantethei 22.4 2.1E+02 0.0047 24.3 5.3 58 110-192 32-91 (140)
98 KOG1413 N-acetylglucosaminyltr 22.1 2.1E+02 0.0045 28.7 5.7 44 105-153 66-110 (411)
99 KOG4518 Hydroxypyruvate isomer 21.7 1.3E+02 0.0029 27.8 4.0 63 106-179 31-101 (264)
100 COG4226 HicB Predicted nucleas 20.9 66 0.0014 26.7 1.8 42 144-185 26-70 (111)
101 cd06570 GH20_chitobiase-like_1 20.8 2.3E+02 0.005 27.1 5.8 50 121-179 16-83 (311)
102 PF08844 DUF1815: Domain of un 20.5 80 0.0017 25.6 2.1 17 134-153 28-44 (105)
103 PF11215 DUF3010: Protein of u 20.5 1.5E+02 0.0033 25.4 4.0 55 135-200 25-80 (138)
104 PF15632 ATPgrasp_Ter: ATP-gra 20.2 4.1E+02 0.0089 25.8 7.4 62 107-187 66-127 (329)
105 PRK14126 cell division protein 20.2 1.3E+02 0.0028 23.4 3.3 23 199-221 60-82 (85)
No 1
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=3.9e-87 Score=696.48 Aligned_cols=270 Identities=36% Similarity=0.625 Sum_probs=242.2
Q ss_pred CCCCceeeeecccch-hHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 022795 12 NSLPLHVSHVKKSSL-IINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPI 90 (292)
Q Consensus 12 ~~~~l~~~~~~~~~~-~~~R~~~~~~~~~l~~yl~wR~~~tl~~~~~~~~~~~~wl~l~~aE~~~~~~~ll~~~~~~~pv 90 (292)
..+||+++.+.++.. .+||+++++++++++++|+||+++ |. .+++|+|+++++||+||+|+|+|+|+.||+|+
T Consensus 191 ~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~----~~--~~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv 264 (1044)
T PLN02915 191 ARQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILT----PA--YDAYPLWLISVICEIWFALSWILDQFPKWFPI 264 (1044)
T ss_pred cCCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcC----cC--CCchHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 468899998776553 479999999999999999999988 22 25689999999999999999999999999999
Q ss_pred CCCCCCCCCCC-------CCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHH
Q 022795 91 SRTVFPERLPE-------ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAW 163 (292)
Q Consensus 91 ~r~~~~~~l~~-------~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~ 163 (292)
+|.+++++|.+ +++||+|||||||+||.+|||.+++|||||+||+|||.+||+|||||||+|.+|||+|.||+
T Consensus 265 ~R~t~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa 344 (1044)
T PLN02915 265 NRETYLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETA 344 (1044)
T ss_pred ccccCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHH
Confidence 99999999873 23499999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchHHHHHHhCCCCCCCccceeCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHhhh------------cCCCC
Q 022795 164 KFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEK------------WGLEN 231 (292)
Q Consensus 164 ~fa~~W~pfc~k~gv~~R~P~~Yf~r~~~~~~kagn~n~a~~~~~~k~~Ye~~k~ri~~~~~~------------~~~~~ 231 (292)
+||++|+||||||+|+|||||+||+.+.+.....-..+|.+||++||+||||||+|||.+.++ ++++|
T Consensus 345 ~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W 424 (1044)
T PLN02915 345 EFARRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPW 424 (1044)
T ss_pred HHHHhhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccC
Confidence 999999999999999999999999998765433334699999999999999999999976433 56789
Q ss_pred CCCCCCCCCcchhhhhccCCCcchhhhhhcCCCCceeEeeeccCCCCCCCccccccccccC
Q 022795 232 EGISRSRDHPSVVEVIGENDNEAANEEQQMNNKMPLLVYVAREKRPSHPHNFKAGALNVLV 292 (292)
Q Consensus 232 ~~~~~~~~h~~ivqv~~~~~~~~~d~~~~~~~~lP~lvyvsReKrp~~~H~~KAGamN~l~ 292 (292)
+.+.+ +|||+|||||++++++. |.+ |++||+||||||||||+|+|||||||||||+
T Consensus 425 ~g~~~-~dHp~IIqVll~~~~~~-d~~---g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLl 480 (1044)
T PLN02915 425 PGNNT-RDHPGMIQVYLGSEGAL-DVE---GKELPRLVYVSREKRPGYNHHKKAGAMNALV 480 (1044)
T ss_pred CCCCC-CCCccceEEeecCCCCc-ccc---cCccceeEEEecccCCCCCcchhhhhhhhHh
Confidence 85554 89999999999987643 555 7899999999999999999999999999996
No 2
>PLN02400 cellulose synthase
Probab=100.00 E-value=8e-87 Score=695.95 Aligned_cols=270 Identities=37% Similarity=0.648 Sum_probs=243.7
Q ss_pred CCCCceeeeecccch-hHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 022795 12 NSLPLHVSHVKKSSL-IINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPI 90 (292)
Q Consensus 12 ~~~~l~~~~~~~~~~-~~~R~~~~~~~~~l~~yl~wR~~~tl~~~~~~~~~~~~wl~l~~aE~~~~~~~ll~~~~~~~pv 90 (292)
..+||+++.+.++.+ .+||+++++++++++++|+||+++.. . ++.|+|+++++||+||+|+|+|+|+.||+|+
T Consensus 260 ~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~----~--~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv 333 (1085)
T PLN02400 260 ARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPV----K--DAYGLWLTSVICEIWFALSWLLDQFPKWYPI 333 (1085)
T ss_pred ccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccC----c--ccHHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 457899998766553 67999999999999999999998842 2 3689999999999999999999999999999
Q ss_pred CCCCCCCCCCC-------CCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHH
Q 022795 91 SRTVFPERLPE-------ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAW 163 (292)
Q Consensus 91 ~r~~~~~~l~~-------~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~ 163 (292)
+|.+++++|.+ +++||+|||||||+||.+|||.+++|||||+||+|||.+|++|||||||+|.+|||+|.||+
T Consensus 334 ~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa 413 (1085)
T PLN02400 334 NRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETA 413 (1085)
T ss_pred cceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHH
Confidence 99999999864 24699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchHHHHHHhCCCCCCCccceeCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHh------------hhcCCCC
Q 022795 164 KFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAI------------EKWGLEN 231 (292)
Q Consensus 164 ~fa~~W~pfc~k~gv~~R~P~~Yf~r~~~~~~kagn~n~a~~~~~~k~~Ye~~k~ri~~~~------------~~~~~~~ 231 (292)
+||++|+||||||+|+|||||+||+.+.+........+|.+||++||+||||||+|||.+. .+++++|
T Consensus 414 ~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~W 493 (1085)
T PLN02400 414 EFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTPW 493 (1085)
T ss_pred HHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCccC
Confidence 9999999999999999999999999987655444568999999999999999999999753 1356789
Q ss_pred CCCCCCCCCcchhhhhccCCCcchhhhhhcCCCCceeEeeeccCCCCCCCccccccccccC
Q 022795 232 EGISRSRDHPSVVEVIGENDNEAANEEQQMNNKMPLLVYVAREKRPSHPHNFKAGALNVLV 292 (292)
Q Consensus 232 ~~~~~~~~h~~ivqv~~~~~~~~~d~~~~~~~~lP~lvyvsReKrp~~~H~~KAGamN~l~ 292 (292)
+. ++++|||+|||||++++++. |.+ |++||+||||||||||+|+|||||||||||+
T Consensus 494 ~g-~~~~dHp~iIqVll~~~~~~-d~~---g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLl 549 (1085)
T PLN02400 494 PG-NNPRDHPGMIQVFLGHSGGL-DTD---GNELPRLVYVSREKRPGFQHHKKAGAMNALI 549 (1085)
T ss_pred CC-CCCCCCchhhhhhhcCCCCc-ccc---cccCceeEEEeccCCCCCCcchhhhhhHHHH
Confidence 84 58899999999999997643 445 7889999999999999999999999999996
No 3
>PLN02436 cellulose synthase A
Probab=100.00 E-value=7.7e-87 Score=694.24 Aligned_cols=270 Identities=36% Similarity=0.630 Sum_probs=242.2
Q ss_pred CCCCceeeeecccch-hHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 022795 12 NSLPLHVSHVKKSSL-IINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPI 90 (292)
Q Consensus 12 ~~~~l~~~~~~~~~~-~~~R~~~~~~~~~l~~yl~wR~~~tl~~~~~~~~~~~~wl~l~~aE~~~~~~~ll~~~~~~~pv 90 (292)
..+||+++...++.. .+||+++++++++++++|+||+++.. . ++.|+|+++++||+||+|+|+|+|+.||+|+
T Consensus 269 ~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~----~--~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv 342 (1094)
T PLN02436 269 GRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPV----N--DAYGLWLTSVICEIWFAVSWILDQFPKWYPI 342 (1094)
T ss_pred cCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccC----c--ccHHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 467899998766553 47999999999999999999998842 2 3689999999999999999999999999999
Q ss_pred CCCCCCCCCCC-------CCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHH
Q 022795 91 SRTVFPERLPE-------ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAW 163 (292)
Q Consensus 91 ~r~~~~~~l~~-------~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~ 163 (292)
+|.+++++|.+ +++||+|||||||+||.+|||.+|+|||||+||+|||.+|++|||||||+|.+|||+|.||+
T Consensus 343 ~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa 422 (1094)
T PLN02436 343 ERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETS 422 (1094)
T ss_pred cceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHH
Confidence 99999998864 24699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchHHHHHHhCCCCCCCccceeCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHhh------------hcCCCC
Q 022795 164 KFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIE------------KWGLEN 231 (292)
Q Consensus 164 ~fa~~W~pfc~k~gv~~R~P~~Yf~r~~~~~~kagn~n~a~~~~~~k~~Ye~~k~ri~~~~~------------~~~~~~ 231 (292)
+||++|+||||||+|+|||||+||+.+.+.....-..+|.+||++||+||||||+|||.+.+ .++++|
T Consensus 423 ~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W 502 (1094)
T PLN02436 423 EFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPW 502 (1094)
T ss_pred HHHHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccC
Confidence 99999999999999999999999999866432222458999999999999999999997643 355789
Q ss_pred CCCCCCCCCcchhhhhccCCCcchhhhhhcCCCCceeEeeeccCCCCCCCccccccccccC
Q 022795 232 EGISRSRDHPSVVEVIGENDNEAANEEQQMNNKMPLLVYVAREKRPSHPHNFKAGALNVLV 292 (292)
Q Consensus 232 ~~~~~~~~h~~ivqv~~~~~~~~~d~~~~~~~~lP~lvyvsReKrp~~~H~~KAGamN~l~ 292 (292)
+. ++++|||+|||||++++++. |.+ |++||+||||||||||+|+|||||||||||+
T Consensus 503 ~g-~~~~dHp~IIqVll~~~~~~-d~~---g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLl 558 (1094)
T PLN02436 503 PG-NNVRDHPGMIQVFLGHSGVR-DVE---GNELPRLVYVSREKRPGFDHHKKAGAMNSLI 558 (1094)
T ss_pred CC-CCCCCCccceEEEecCCCCc-ccc---cccCceEEEEecccCCCCCcchhhhhhhhhh
Confidence 84 58899999999999997643 555 8899999999999999999999999999996
No 4
>PLN02195 cellulose synthase A
Probab=100.00 E-value=9.9e-86 Score=682.83 Aligned_cols=270 Identities=35% Similarity=0.622 Sum_probs=242.9
Q ss_pred CCCCceeeeecccch-hHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 022795 12 NSLPLHVSHVKKSSL-IINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPI 90 (292)
Q Consensus 12 ~~~~l~~~~~~~~~~-~~~R~~~~~~~~~l~~yl~wR~~~tl~~~~~~~~~~~~wl~l~~aE~~~~~~~ll~~~~~~~pv 90 (292)
..+||+++.+.++.. .+||+++++++++++++|+||+++..+ ++.|+|+++++||+||+|+|+|+|+.||+|+
T Consensus 156 ~~~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~------~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv 229 (977)
T PLN02195 156 AYEPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPVD------SAFGLWLTSVICEIWFAFSWVLDQFPKWSPI 229 (977)
T ss_pred ccCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCccc------cchHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 457899998776553 479999999999999999999988422 3569999999999999999999999999999
Q ss_pred CCCCCCCCCCC-------CCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHH
Q 022795 91 SRTVFPERLPE-------ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAW 163 (292)
Q Consensus 91 ~r~~~~~~l~~-------~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~ 163 (292)
+|.+++++|.+ +++||+|||||||+||.+|||.+++|||||+||+|||.+|++|||||||||.+|||+|.||+
T Consensus 230 ~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa 309 (977)
T PLN02195 230 NRETYIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETA 309 (977)
T ss_pred cceECHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHH
Confidence 99999998864 24699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchHHHHHHhCCCCCCCccceeCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHhh------------hcCCCC
Q 022795 164 KFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIE------------KWGLEN 231 (292)
Q Consensus 164 ~fa~~W~pfc~k~gv~~R~P~~Yf~r~~~~~~kagn~n~a~~~~~~k~~Ye~~k~ri~~~~~------------~~~~~~ 231 (292)
+||++|+||||||+|+|||||+||+.+.+........+|.+||++||+||||||+|||.+.+ +++++|
T Consensus 310 ~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W 389 (977)
T PLN02195 310 EFARKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPW 389 (977)
T ss_pred HHHHhhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccC
Confidence 99999999999999999999999999876554445689999999999999999999997642 456788
Q ss_pred CCCCCCCCCcchhhhhccCCCcchhhhhhcCCCCceeEeeeccCCCCCCCccccccccccC
Q 022795 232 EGISRSRDHPSVVEVIGENDNEAANEEQQMNNKMPLLVYVAREKRPSHPHNFKAGALNVLV 292 (292)
Q Consensus 232 ~~~~~~~~h~~ivqv~~~~~~~~~d~~~~~~~~lP~lvyvsReKrp~~~H~~KAGamN~l~ 292 (292)
+ +++++|||+|||||++++++. |.+ |++||+||||||||||+|+|||||||||+|+
T Consensus 390 ~-g~~~~dHp~IIqVll~~~~~~-d~~---g~~lP~LVYVSREKrPg~~Hh~KAGamNall 445 (977)
T PLN02195 390 P-GNNTRDHPGMIQVFLGETGAR-DIE---GNELPRLVYVSREKRPGYQHHKKAGAENALV 445 (977)
T ss_pred C-CCCCCCCcchhhhhccCCCCc-ccc---cccCceeEEEeccCCCCCCcccccchhHHHH
Confidence 7 458899999999999887643 555 7899999999999999999999999999985
No 5
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=1.5e-85 Score=686.10 Aligned_cols=270 Identities=36% Similarity=0.659 Sum_probs=243.0
Q ss_pred CCCCceeeeecccc-hhHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 022795 12 NSLPLHVSHVKKSS-LIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPI 90 (292)
Q Consensus 12 ~~~~l~~~~~~~~~-~~~~R~~~~~~~~~l~~yl~wR~~~tl~~~~~~~~~~~~wl~l~~aE~~~~~~~ll~~~~~~~pv 90 (292)
..+||+++...++. +.+||+++++++++++++|+||+++.. .++.|+|+++++||+||+|+|+|+|+.||+|+
T Consensus 253 ~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~------~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv 326 (1079)
T PLN02638 253 ARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPV------RNAYALWLISVICEIWFALSWILDQFPKWLPV 326 (1079)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccC------CccHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 56889999876655 367999999999999999999998842 25689999999999999999999999999999
Q ss_pred CCCCCCCCCCC-------CCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHH
Q 022795 91 SRTVFPERLPE-------ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAW 163 (292)
Q Consensus 91 ~r~~~~~~l~~-------~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~ 163 (292)
+|.+++++|.+ +++||+|||||||+||.+|||.+|+|||||+||+|||.+|++|||||||+|.+|||+|.||+
T Consensus 327 ~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa 406 (1079)
T PLN02638 327 NRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETS 406 (1079)
T ss_pred ccccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHH
Confidence 99999998864 24699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchHHHHHHhCCCCCCCccceeCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHhh------------hcCCCC
Q 022795 164 KFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIE------------KWGLEN 231 (292)
Q Consensus 164 ~fa~~W~pfc~k~gv~~R~P~~Yf~r~~~~~~kagn~n~a~~~~~~k~~Ye~~k~ri~~~~~------------~~~~~~ 231 (292)
+||++|+||||||+|+|||||+||+.+.+........+|.+||++||+||||||+|||.+.. +++++|
T Consensus 407 ~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W 486 (1079)
T PLN02638 407 EFARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPW 486 (1079)
T ss_pred HHHHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccC
Confidence 99999999999999999999999999876543444569999999999999999999997541 345788
Q ss_pred CCCCCCCCCcchhhhhccCCCcchhhhhhcCCCCceeEeeeccCCCCCCCccccccccccC
Q 022795 232 EGISRSRDHPSVVEVIGENDNEAANEEQQMNNKMPLLVYVAREKRPSHPHNFKAGALNVLV 292 (292)
Q Consensus 232 ~~~~~~~~h~~ivqv~~~~~~~~~d~~~~~~~~lP~lvyvsReKrp~~~H~~KAGamN~l~ 292 (292)
+. ++++|||+||||+++++++. |.+ |++||+||||||||||+|+|||||||||||+
T Consensus 487 ~g-~~~~dHp~IiqVll~~~~~~-d~~---g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLl 542 (1079)
T PLN02638 487 PG-NNTRDHPGMIQVFLGHSGGL-DTE---GNELPRLVYVSREKRPGFQHHKKAGAMNALV 542 (1079)
T ss_pred CC-CCCCCCHHHHHHHhcCCCcc-ccc---cccccceEEEecccCCCCCcccccchHHHHH
Confidence 85 48899999999999997643 445 7889999999999999999999999999986
No 6
>PLN02189 cellulose synthase
Probab=100.00 E-value=1.9e-85 Score=683.70 Aligned_cols=271 Identities=36% Similarity=0.634 Sum_probs=242.7
Q ss_pred CCCCCceeeeecccch-hHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 022795 11 QNSLPLHVSHVKKSSL-IINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRP 89 (292)
Q Consensus 11 ~~~~~l~~~~~~~~~~-~~~R~~~~~~~~~l~~yl~wR~~~tl~~~~~~~~~~~~wl~l~~aE~~~~~~~ll~~~~~~~p 89 (292)
...+||+++...+... .+||+++++++++++++|+||+++.. .++.|+|+++++||+||+|+|+|+|+.||+|
T Consensus 234 ~~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~------~~~~~~W~~s~~~E~wFaf~Wll~q~~kw~P 307 (1040)
T PLN02189 234 EARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPV------HDAIGLWLTSIICEIWFAVSWILDQFPKWFP 307 (1040)
T ss_pred cCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcC------ccchHHHHHHHHHHHHHHHHHHHccCccccc
Confidence 4578899998776553 47999999999999999999998842 1358999999999999999999999999999
Q ss_pred cCCCCCCCCCCC-------CCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHH
Q 022795 90 ISRTVFPERLPE-------ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREA 162 (292)
Q Consensus 90 v~r~~~~~~l~~-------~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea 162 (292)
++|.+++++|.+ +++||+|||||||+||.+|||.+|+|||||+||+|||.+|++|||||||+|.+|||+|.||
T Consensus 308 v~R~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EA 387 (1040)
T PLN02189 308 IDRETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSET 387 (1040)
T ss_pred ccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHH
Confidence 999999998864 2349999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhchHHHHHHhCCCCCCCccceeCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHh------------hhcCCC
Q 022795 163 WKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAI------------EKWGLE 230 (292)
Q Consensus 163 ~~fa~~W~pfc~k~gv~~R~P~~Yf~r~~~~~~kagn~n~a~~~~~~k~~Ye~~k~ri~~~~------------~~~~~~ 230 (292)
++||++|+||||||+|+|||||+||+.+.+........+|.+||++||+||||||+|||.+. .+++++
T Consensus 388 a~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~ 467 (1040)
T PLN02189 388 AEFARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTP 467 (1040)
T ss_pred HHHHHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCcc
Confidence 99999999999999999999999999986644344456999999999999999999999654 234578
Q ss_pred CCCCCCCCCCcchhhhhccCCCcchhhhhhcCCCCceeEeeeccCCCCCCCccccccccccC
Q 022795 231 NEGISRSRDHPSVVEVIGENDNEAANEEQQMNNKMPLLVYVAREKRPSHPHNFKAGALNVLV 292 (292)
Q Consensus 231 ~~~~~~~~~h~~ivqv~~~~~~~~~d~~~~~~~~lP~lvyvsReKrp~~~H~~KAGamN~l~ 292 (292)
|+.+ +++|||+||||+++++++. |.+ |++||+||||||||||+|||||||||||||+
T Consensus 468 W~g~-~~~dHp~IiQVll~~~~~~-d~~---g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLl 524 (1040)
T PLN02189 468 WPGN-NTRDHPGMIQVFLGHSGGH-DTE---GNELPRLVYVSREKRPGFQHHKKAGAMNALI 524 (1040)
T ss_pred CCCC-CCCCCHHHHHHHhcCCCCc-ccc---ccccceeEEEeccCCCCCCcccchhhHHHHH
Confidence 8854 8899999999999997653 445 8889999999999999999999999999986
No 7
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=4e-85 Score=683.04 Aligned_cols=275 Identities=37% Similarity=0.628 Sum_probs=240.5
Q ss_pred CCCCceeeeecccch-hHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 022795 12 NSLPLHVSHVKKSSL-IINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPI 90 (292)
Q Consensus 12 ~~~~l~~~~~~~~~~-~~~R~~~~~~~~~l~~yl~wR~~~tl~~~~~~~~~~~~wl~l~~aE~~~~~~~ll~~~~~~~pv 90 (292)
..+||+++...+... .+||+++++++++++++|+||+++ |. .++.|+|+++++||+||+|+|+|+|+.||+|+
T Consensus 266 ~~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~----~~--~~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv 339 (1135)
T PLN02248 266 PWRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRN----PN--EDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPI 339 (1135)
T ss_pred CCCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcC----CC--CcchHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 458899998766553 479999999999999999999988 22 25689999999999999999999999999999
Q ss_pred CCCCCCCCCCC------------CCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHH
Q 022795 91 SRTVFPERLPE------------ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLG 158 (292)
Q Consensus 91 ~r~~~~~~l~~------------~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~ 158 (292)
+|.+++++|.+ +++||+|||||||+||++|||.+++|||||+||+|||.+||+||||||||+.+|||+
T Consensus 340 ~R~t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~A 419 (1135)
T PLN02248 340 NRATDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEA 419 (1135)
T ss_pred ccccCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHH
Confidence 99999888754 246999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchHHHHHHhCCCCCCCccceeCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHhh-------------
Q 022795 159 MREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIE------------- 225 (292)
Q Consensus 159 l~ea~~fa~~W~pfc~k~gv~~R~P~~Yf~r~~~~~~kagn~n~a~~~~~~k~~Ye~~k~ri~~~~~------------- 225 (292)
|.||++||++|+||||||+|+|||||+||+.+.+........+|.+||+.||+||||||+|||.+.+
T Consensus 420 L~EAa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~ 499 (1135)
T PLN02248 420 MAEAASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNARE 499 (1135)
T ss_pred HHHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhH
Confidence 9999999999999999999999999999999876554445689999999999999999999996521
Q ss_pred --h---------cC-----------------CCCC----C---CCCCCCCcchhhhhccCCCcc-----h-----hhhhh
Q 022795 226 --K---------WG-----------------LENE----G---ISRSRDHPSVVEVIGENDNEA-----A-----NEEQQ 260 (292)
Q Consensus 226 --~---------~~-----------------~~~~----~---~~~~~~h~~ivqv~~~~~~~~-----~-----d~~~~ 260 (292)
+ |+ ++|+ + +++++|||+|||||+++++.. . -|.++
T Consensus 500 e~~~~~~~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~ 579 (1135)
T PLN02248 500 EIKAKKKQRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTD 579 (1135)
T ss_pred HHHhhhhhhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCcccccccccccc
Confidence 0 22 3333 2 579999999999999876511 1 12235
Q ss_pred cCCCCceeEeeeccCCCCCCCccccccccccC
Q 022795 261 MNNKMPLLVYVAREKRPSHPHNFKAGALNVLV 292 (292)
Q Consensus 261 ~~~~lP~lvyvsReKrp~~~H~~KAGamN~l~ 292 (292)
+|.+||+||||||||||+|+|||||||||||+
T Consensus 580 ~d~~lP~LVYVSREKRPg~~Hh~KAGAMNALl 611 (1135)
T PLN02248 580 VDIRLPMLVYVSREKRPGYDHNKKAGAMNALV 611 (1135)
T ss_pred cccccceeEEEecccCCCCCcccccchhhhHH
Confidence 67799999999999999999999999999995
No 8
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=4.7e-85 Score=665.86 Aligned_cols=268 Identities=36% Similarity=0.652 Sum_probs=237.6
Q ss_pred HhcCCCCCceeeeecccchhHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 022795 8 EKQQNSLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRW 87 (292)
Q Consensus 8 ~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~l~~yl~wR~~~tl~~~~~~~~~~~~wl~l~~aE~~~~~~~ll~~~~~~ 87 (292)
++..+++|||++.+.+.. ++|++.+++++++++|++||+++.++. .++|+++++||+||+|+|+|+|+.+|
T Consensus 3 ~~~~~~~pL~~~~~~~~~--~~r~~~~~vl~~~~~~l~~R~~~~~~~-------~~~W~~~~~~E~wf~~~WlL~q~~kw 73 (756)
T PLN02190 3 DSSSSLPPLCERISHKSY--FLRAVDLTILGLLFSLLLYRILHMSEN-------DTVWLVAFLCESCFSFVWLLITCIKW 73 (756)
T ss_pred cccCCCCCceeeeeccch--hHHHHHHHHHHHHHHHHHHHHhCCCcc-------cHHHHHHHHHHHHHHHHHHHhcccee
Confidence 445577899999987755 599999999999999999999996542 25789999999999999999999999
Q ss_pred cccCCCCCCCCCCC-CCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHh
Q 022795 88 RPISRTVFPERLPE-ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFA 166 (292)
Q Consensus 88 ~pv~r~~~~~~l~~-~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa 166 (292)
+|++|.+++++|.+ -++||+||||||||||.+|||++|+|||+|++++|||.||++|||||||+|++|||+|.||++||
T Consensus 74 ~pv~r~~~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA 153 (756)
T PLN02190 74 SPAEYKPYPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFA 153 (756)
T ss_pred eecCCCCCcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHH
Confidence 99999999999876 35699999999999999999999999999999999999999999999999999999999999999
Q ss_pred hchHHHHHHhCCCCCCCccceeCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHhhh-------cCCCCCCCCCCCC
Q 022795 167 RSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEK-------WGLENEGISRSRD 239 (292)
Q Consensus 167 ~~W~pfc~k~gv~~R~P~~Yf~r~~~~~~kagn~n~a~~~~~~k~~Ye~~k~ri~~~~~~-------~~~~~~~~~~~~~ 239 (292)
++|+||||||||+|||||+||+.+.... ...+|.+||+.||+||||||+||+++... +..+..++++++|
T Consensus 154 ~~WvPFCrK~~IepRaPe~YF~~~~~~~---~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~d 230 (756)
T PLN02190 154 KIWVPFCKKYNVRVRAPFRYFLNPPVAT---EDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPND 230 (756)
T ss_pred hhhcccccccCCCcCCHHHHhcCCCCCC---CCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCC
Confidence 9999999999999999999999854321 23599999999999999999999987421 1123335689999
Q ss_pred CcchhhhhccCCCcchhhhhhcCCCCceeEeeeccCCCCCCCccccccccccC
Q 022795 240 HPSVVEVIGENDNEAANEEQQMNNKMPLLVYVAREKRPSHPHNFKAGALNVLV 292 (292)
Q Consensus 240 h~~ivqv~~~~~~~~~d~~~~~~~~lP~lvyvsReKrp~~~H~~KAGamN~l~ 292 (292)
||+|||||+|++++ +.+ |++||+||||||||||+|+|||||||||||+
T Consensus 231 H~~iiqVll~~~~~--~~~---~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLl 278 (756)
T PLN02190 231 HSTIVKVVWENKGG--VGD---EKEVPHLVYISREKRPNYLHHYKAGAMNFLV 278 (756)
T ss_pred CccceEEEecCCCC--ccc---cccCceEEEEeccCCCCCCcccccchhHHHH
Confidence 99999999999553 223 7899999999999999999999999999985
No 9
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=2.1e-84 Score=662.83 Aligned_cols=268 Identities=42% Similarity=0.697 Sum_probs=242.4
Q ss_pred HHhcCCCCCceeeeecccchhHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 022795 7 MEKQQNSLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYR 86 (292)
Q Consensus 7 ~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~l~~yl~wR~~~tl~~~~~~~~~~~~wl~l~~aE~~~~~~~ll~~~~~ 86 (292)
+++....+|||++++.+ .+.+||+++++++++++++|+||+++.+.. ...|.|+++++||+||+|+|+++|+.|
T Consensus 5 ~~~~~~~~pL~~~~~~~-~~~~~R~~~~~~~~~i~~ll~~r~~~~~~~-----~~~~~w~~~~~~e~wf~f~W~l~q~~k 78 (734)
T PLN02893 5 TTASTGAPPLHTCHPMR-RTIANRVFAVVYSCAILALLYHHVIALLHS-----TTTLITLLLLLADIVLAFMWATTQAFR 78 (734)
T ss_pred ccCCCCCCCceeeeecC-CchHHHHHHHHHHHHHHHHHHHHhcccccc-----cchHHHHHHHHHHHHHHHHHHHccCcc
Confidence 34455779999999976 445799999999999999999999887543 237899999999999999999999999
Q ss_pred hcccCCCCCCCCCCC---CCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHH
Q 022795 87 WRPISRTVFPERLPE---ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAW 163 (292)
Q Consensus 87 ~~pv~r~~~~~~l~~---~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~ 163 (292)
|+|++|.+++++|.+ .++||+|||||||+||.+|||.+++|||+|+||+|||.||++|||||||||.+|||+|.||+
T Consensus 79 ~~Pv~r~~~~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa 158 (734)
T PLN02893 79 MCPVHRRVFIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAA 158 (734)
T ss_pred ccccccccCHHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHH
Confidence 999999999999875 45799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchHHHHHHhCCCCCCCccceeCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHh---------------hhcC
Q 022795 164 KFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAI---------------EKWG 228 (292)
Q Consensus 164 ~fa~~W~pfc~k~gv~~R~P~~Yf~r~~~~~~kagn~n~a~~~~~~k~~Ye~~k~ri~~~~---------------~~~~ 228 (292)
+||++|+||||||||+|||||+||+.+.. ++..||+.||+||||||+|||.+. ++++
T Consensus 159 ~FA~~WvPFCrk~~ie~R~P~~YF~~~~~--------~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f 230 (734)
T PLN02893 159 KFATHWLPFCKKNKIVERCPEAYFSSNSH--------SWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAF 230 (734)
T ss_pred HHHHhhcccccccCCCcCCHHHHhccCCC--------ccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhccccccc
Confidence 99999999999999999999999998732 356799999999999999999762 2456
Q ss_pred CCCCCCCCCCCCcchhhhhccCCCcchhhhhhcCCCCceeEeeeccCCCCCCCccccccccccC
Q 022795 229 LENEGISRSRDHPSVVEVIGENDNEAANEEQQMNNKMPLLVYVAREKRPSHPHNFKAGALNVLV 292 (292)
Q Consensus 229 ~~~~~~~~~~~h~~ivqv~~~~~~~~~d~~~~~~~~lP~lvyvsReKrp~~~H~~KAGamN~l~ 292 (292)
+.|.++++++|||+||||++|++++. |.+ |.+||+||||||||||+|||||||||||+|+
T Consensus 231 ~~w~~~~~~~dH~~ivqV~l~~~~~~-d~~---g~~lP~lvYvsReKrp~~~Hh~KAGaLN~ll 290 (734)
T PLN02893 231 SRWTDKFTRQDHPTVIQVLLESGKDK-DIT---GHTMPNLIYVSREKSKNSPHHFKAGALNTLL 290 (734)
T ss_pred ccCcCCCCCCCCCceeeeeccCCCcc-chh---hccCCceEEEeCCCCCCCCcccccchHHHHH
Confidence 78999999999999999999997643 455 7789999999999999999999999999985
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=3.6e-67 Score=533.42 Aligned_cols=180 Identities=47% Similarity=0.843 Sum_probs=166.4
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCCCCCCccce
Q 022795 108 IDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYF 187 (292)
Q Consensus 108 VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R~P~~Yf 187 (292)
|||||||+||.+|||.+++|||+|+||+|||.+||+|||||||+|++|||+|.||++|||+|+||||||+|+|||||+||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHhh------------hcCCCCCCCCCCCCCcchhhhhccCCCcch
Q 022795 188 SDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIE------------KWGLENEGISRSRDHPSVVEVIGENDNEAA 255 (292)
Q Consensus 188 ~r~~~~~~kagn~n~a~~~~~~k~~Ye~~k~ri~~~~~------------~~~~~~~~~~~~~~h~~ivqv~~~~~~~~~ 255 (292)
+.+.+.+......+|++||++||++|||||+|||.+.+ .++++|+ +++++|||+||||+++++++.
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~-~~~~~dH~~iiqv~~~~~~~~- 158 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWP-GNTRRDHPGIIQVLLDNPGGK- 158 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCC-CCCCcCChhheEeeccCCCCc-
Confidence 99877665556789999999999999999999997532 1246887 679999999999999987653
Q ss_pred hhhhhcCCCCceeEeeeccCCCCCCCccccccccccC
Q 022795 256 NEEQQMNNKMPLLVYVAREKRPSHPHNFKAGALNVLV 292 (292)
Q Consensus 256 d~~~~~~~~lP~lvyvsReKrp~~~H~~KAGamN~l~ 292 (292)
|.+ |++||+||||||||||+|||||||||||||+
T Consensus 159 ~~~---g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~ 192 (720)
T PF03552_consen 159 DVD---GNELPMLVYVSREKRPGYPHHFKAGAMNALL 192 (720)
T ss_pred ccc---cCcCCeEEEEeccCCCCCCchhhhccccccc
Confidence 556 8899999999999999999999999999996
No 11
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=99.92 E-value=1.6e-24 Score=224.74 Aligned_cols=166 Identities=28% Similarity=0.429 Sum_probs=135.7
Q ss_pred HHHHHHHHHHH-HHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCc
Q 022795 29 NRSLVLLHFTS-LAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPG 107 (292)
Q Consensus 29 ~R~~~~~~~~~-l~~yl~wR~~~tl~~~~~~~~~~~~wl~l~~aE~~~~~~~ll~~~~~~~pv~r~~~~~~l~~~~~lP~ 107 (292)
.|++.++.+++ .+.|++||++.||+. .+.....++++++++|+++.+..+++.+..++|..|.+.+.+ ...+.+|+
T Consensus 56 ~~~~~~~~~~~~~~~y~~wr~~~tl~~--~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~P~ 132 (713)
T TIGR03030 56 PRLLLLVLSVFISLRYLWWRLTETLPF--DNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVPLP-LDPEEWPT 132 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCC--CccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccCCC-CCcccCCe
Confidence 47776666665 478999999999985 334566788889999999999988888888888777643321 12466899
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHH----HHHHHHHhhchHHHHHHhCCCCCCC
Q 022795 108 IDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLG----MREAWKFARSWLPFCKRFGIKTICP 183 (292)
Q Consensus 108 VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~----l~ea~~fa~~W~pfc~k~gv~~R~P 183 (292)
|||+||||| |+++++.+|+.+++++|||.++++|||+|||++|.|... ..|+.+-+..+..+|+++||.
T Consensus 133 VsViIP~yN---E~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~~v~---- 205 (713)
T TIGR03030 133 VDVFIPTYN---EDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKLGVN---- 205 (713)
T ss_pred eEEEEcCCC---CCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHcCcE----
Confidence 999999999 999999999999999999999999999999999988532 333333345677999999999
Q ss_pred ccceeCCCCCCCCCChhhhHHHH
Q 022795 184 EAYFSDPENGDGDSGNAEFIVER 206 (292)
Q Consensus 184 ~~Yf~r~~~~~~kagn~n~a~~~ 206 (292)
|++|++|.|+|+||+|.+.++
T Consensus 206 --yi~r~~n~~~KAgnLN~al~~ 226 (713)
T TIGR03030 206 --YITRPRNVHAKAGNINNALKH 226 (713)
T ss_pred --EEECCCCCCCChHHHHHHHHh
Confidence 999999999999999998874
No 12
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=99.91 E-value=1.8e-23 Score=219.61 Aligned_cols=152 Identities=25% Similarity=0.468 Sum_probs=125.8
Q ss_pred HHHHHHH-HHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCC-CCCC
Q 022795 28 INRSLVL-LHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPE-ADQL 105 (292)
Q Consensus 28 ~~R~~~~-~~~~~l~~yl~wR~~~tl~~~~~~~~~~~~wl~l~~aE~~~~~~~ll~~~~~~~pv~r~~~~~~l~~-~~~l 105 (292)
+.|++.+ +.+++.+.|++||++.||+.. +..+.+++++++++|+++.+..+++.+..+.|..|.+.+ ++. .+.+
T Consensus 184 ~~~~~l~~l~~~~~~rY~~WR~~~tL~~~--~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~~--~~~~~~~~ 259 (852)
T PRK11498 184 FSALMLIVLSLTVSCRYIWWRYTSTLNWD--DPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVP--LPKDMSLW 259 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeCCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCC--CCcccCCC
Confidence 3454443 344446899999999999862 345677888899999999998888888877777775422 333 4568
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCCCCCCcc
Q 022795 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEA 185 (292)
Q Consensus 106 P~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R~P~~ 185 (292)
|+|||+||||| |+.+++.+|+.+++++|||.++++|||+|||++| +.. .+|+++||+
T Consensus 260 P~VsViIPtYN---E~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D-------~t~-------~la~~~~v~------ 316 (852)
T PRK11498 260 PTVDIFVPTYN---EDLNVVKNTIYASLGIDWPKDKLNIWILDDGGRE-------EFR-------QFAQEVGVK------ 316 (852)
T ss_pred CcEEEEEecCC---CcHHHHHHHHHHHHhccCCCCceEEEEEeCCCCh-------HHH-------HHHHHCCcE------
Confidence 99999999999 9999999999999999999999999999999999 433 788999999
Q ss_pred ceeCCCCCCCCCChhhhHHHH
Q 022795 186 YFSDPENGDGDSGNAEFIVER 206 (292)
Q Consensus 186 Yf~r~~~~~~kagn~n~a~~~ 206 (292)
|++|++|.++||||+|++.+.
T Consensus 317 yI~R~~n~~gKAGnLN~aL~~ 337 (852)
T PRK11498 317 YIARPTHEHAKAGNINNALKY 337 (852)
T ss_pred EEEeCCCCcchHHHHHHHHHh
Confidence 999999999999999998874
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=99.48 E-value=1.6e-12 Score=135.08 Aligned_cols=167 Identities=14% Similarity=0.093 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhH---HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCC-CCC--CCC
Q 022795 28 INRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLL---PWLLVFAAELLLSFQWLLGIAYRWRPISRTVF-PER--LPE 101 (292)
Q Consensus 28 ~~R~~~~~~~~~l~~yl~wR~~~tl~~~~~~~~~~~---~wl~l~~aE~~~~~~~ll~~~~~~~pv~r~~~-~~~--l~~ 101 (292)
+.|++.++..++...|..|+...+++..+....... +..+++..+.+.+...+++.+...+...+... .+. .+.
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~~~~~~~~~~~~~~~~~ 119 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLRGRDKYSISASAAGDPP 119 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccCCcccccCCC
Confidence 667777777778899999999999876332211111 12233444555555555555443221111110 000 011
Q ss_pred CCCCCceEEEEecCCCCCCChHH----HHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhC
Q 022795 102 ADQLPGIDVFICTADPTKEPTVE----VMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFG 177 (292)
Q Consensus 102 ~~~lP~VDVfI~Tynp~~Ep~~v----v~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~g 177 (292)
....|.|+|+||+|| |+++. ++.|+.|+.+.+||. +++++|+|||+++.+...- | +.|..+|++++
T Consensus 120 ~~~~~~VaVliP~yN---Ed~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~e-~-----~~~~~L~~~~~ 189 (691)
T PRK05454 120 PPPEARTAILMPIYN---EDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAAE-E-----AAWLELRAELG 189 (691)
T ss_pred CCCCCceEEEEeCCC---CChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHHH-H-----HHHHHHHHhcC
Confidence 345789999999999 99875 455556666789984 8999999999998553321 1 13668999985
Q ss_pred CCCCCCccceeCCCCCCCCCChhhhHHHH
Q 022795 178 IKTICPEAYFSDPENGDGDSGNAEFIVER 206 (292)
Q Consensus 178 v~~R~P~~Yf~r~~~~~~kagn~n~a~~~ 206 (292)
- .....|..|..|.++|+||+|.+.++
T Consensus 190 ~--~~~i~yr~R~~n~~~KaGNl~~~~~~ 216 (691)
T PRK05454 190 G--EGRIFYRRRRRNVGRKAGNIADFCRR 216 (691)
T ss_pred C--CCcEEEEECCcCCCccHHHHHHHHHh
Confidence 2 22345888999999999999876654
No 14
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.23 E-value=6.7e-11 Score=113.91 Aligned_cols=81 Identities=27% Similarity=0.459 Sum_probs=60.9
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhC--CCCCC
Q 022795 105 LPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFG--IKTIC 182 (292)
Q Consensus 105 lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~g--v~~R~ 182 (292)
+|.|||+||+|| |+++++++|+.++.++||| +++|+|+|||++|.|.+.+.+ .+.+++ +....
T Consensus 53 ~p~vsviiP~yn---E~~~~~~~~l~s~~~~dyp--~~evivv~d~~~d~~~~~~~~----------~~~~~~~~~~~~~ 117 (439)
T COG1215 53 LPKVSVIIPAYN---EEPEVLEETLESLLSQDYP--RYEVIVVDDGSTDETYEILEE----------LGAEYGPNFRVIY 117 (439)
T ss_pred CCceEEEEecCC---CchhhHHHHHHHHHhCCCC--CceEEEECCCCChhHHHHHHH----------HHhhcCcceEEEe
Confidence 599999999999 9999999999999999999 599999999999955444443 223331 11110
Q ss_pred CccceeCCCCCCCCCChhhhHHHH
Q 022795 183 PEAYFSDPENGDGDSGNAEFIVER 206 (292)
Q Consensus 183 P~~Yf~r~~~~~~kagn~n~a~~~ 206 (292)
| +...+.|+|++|.+...
T Consensus 118 ~------~~~~~gK~~al~~~l~~ 135 (439)
T COG1215 118 P------EKKNGGKAGALNNGLKR 135 (439)
T ss_pred c------cccCccchHHHHHHHhh
Confidence 0 24567788889887764
No 15
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.15 E-value=3.5e-10 Score=111.53 Aligned_cols=84 Identities=15% Similarity=0.204 Sum_probs=64.0
Q ss_pred CCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCCCC
Q 022795 102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTI 181 (292)
Q Consensus 102 ~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R 181 (292)
.+.+|.|+|+||+|| |+ +.+.+||.|+.+++||.++++|+|+|||++|.|.+.+.+++ +++..
T Consensus 45 ~~~~P~vsVIIP~yN---e~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~----------~~~~~--- 107 (439)
T TIGR03111 45 IGKLPDITIIIPVYN---SE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQ----------NEFPG--- 107 (439)
T ss_pred cCCCCCEEEEEEeCC---Ch-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHH----------HhCCC---
Confidence 356899999999999 77 89999999999999999899999999999998877665532 33221
Q ss_pred CCccceeCCCCCCCCCChhhhHHH
Q 022795 182 CPEAYFSDPENGDGDSGNAEFIVE 205 (292)
Q Consensus 182 ~P~~Yf~r~~~~~~kagn~n~a~~ 205 (292)
.++...+..+.|++++|.+.+
T Consensus 108 ---v~v~~~~~~~Gka~AlN~gl~ 128 (439)
T TIGR03111 108 ---LSLRYMNSDQGKAKALNAAIY 128 (439)
T ss_pred ---eEEEEeCCCCCHHHHHHHHHH
Confidence 133322233567788888776
No 16
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.11 E-value=7.4e-10 Score=109.18 Aligned_cols=80 Identities=15% Similarity=0.191 Sum_probs=61.2
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHh-CCCCC
Q 022795 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRF-GIKTI 181 (292)
Q Consensus 103 ~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~-gv~~R 181 (292)
...|.|+|+||+|| |+ ..+.+|+.|+++++|| +++|+|+|||++|.|.+.+.+ +++++ ++.
T Consensus 72 ~~~p~vsViIP~yN---E~-~~i~~~l~sll~q~yp--~~eIivVdDgs~D~t~~~~~~----------~~~~~~~v~-- 133 (444)
T PRK14583 72 KGHPLVSILVPCFN---EG-LNARETIHAALAQTYT--NIEVIAINDGSSDDTAQVLDA----------LLAEDPRLR-- 133 (444)
T ss_pred CCCCcEEEEEEeCC---CH-HHHHHHHHHHHcCCCC--CeEEEEEECCCCccHHHHHHH----------HHHhCCCEE--
Confidence 45799999999999 88 5689999999999999 699999999999977766554 23333 233
Q ss_pred CCccceeCCCCCCCCCChhhhHHH
Q 022795 182 CPEAYFSDPENGDGDSGNAEFIVE 205 (292)
Q Consensus 182 ~P~~Yf~r~~~~~~kagn~n~a~~ 205 (292)
++..+.|. .|++++|.+.+
T Consensus 134 ----vv~~~~n~-Gka~AlN~gl~ 152 (444)
T PRK14583 134 ----VIHLAHNQ-GKAIALRMGAA 152 (444)
T ss_pred ----EEEeCCCC-CHHHHHHHHHH
Confidence 55545443 37788887765
No 17
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=99.00 E-value=1e-09 Score=101.38 Aligned_cols=87 Identities=16% Similarity=0.279 Sum_probs=64.3
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHhc----CCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCCCCCC
Q 022795 108 IDVFICTADPTKEPTVEVMNTVLSAMA----LDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICP 183 (292)
Q Consensus 108 VDVfI~Tynp~~Ep~~vv~~Tvls~la----lDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R~P 183 (292)
|+|+||+|| |+++++.+|+.+++. .||+. +++|||+|||+++-.. ..|. +.|..+|++++- ..-
T Consensus 1 ~SIliP~~n---e~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~--~~~~----~~~~~l~~~~~~--~~~ 68 (254)
T cd04191 1 TAIVMPVYN---EDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIW--LAEE----AAWLDLCEELGA--QGR 68 (254)
T ss_pred CEEEEeCCC---CCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHH--HHHH----HHHHHHHHHhCC--CCc
Confidence 689999998 999999999999875 56622 7999999999987211 1111 235568877631 111
Q ss_pred ccceeCCCCCCCCCChhhhHHHH
Q 022795 184 EAYFSDPENGDGDSGNAEFIVER 206 (292)
Q Consensus 184 ~~Yf~r~~~~~~kagn~n~a~~~ 206 (292)
-.|..|..+.+.|+||+|.+...
T Consensus 69 v~~~~r~~~~g~Kag~l~~~~~~ 91 (254)
T cd04191 69 IYYRRRRENTGRKAGNIADFCRR 91 (254)
T ss_pred EEEEEcCCCCCccHHHHHHHHHH
Confidence 23999999999999999988864
No 18
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.00 E-value=1.2e-09 Score=95.55 Aligned_cols=81 Identities=35% Similarity=0.569 Sum_probs=64.8
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCCCCCCcc
Q 022795 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEA 185 (292)
Q Consensus 106 P~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R~P~~ 185 (292)
|.|.|+||||| |+++.+..++.|+++.+||.++++|+|+|||+++.|.+.+. .++.+..+.
T Consensus 1 p~vsviip~~n---~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~----------~~~~~~~~~------ 61 (234)
T cd06421 1 PTVDVFIPTYN---EPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAA----------ELGVEYGYR------ 61 (234)
T ss_pred CceEEEEecCC---CcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHH----------HhhcccCce------
Confidence 78999999999 88789999999999999998889999999999984433332 233333444
Q ss_pred ceeCCCCCCCCCChhhhHHH
Q 022795 186 YFSDPENGDGDSGNAEFIVE 205 (292)
Q Consensus 186 Yf~r~~~~~~kagn~n~a~~ 205 (292)
|...+.+.+.++|++|.+.+
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~ 81 (234)
T cd06421 62 YLTRPDNRHAKAGNLNNALA 81 (234)
T ss_pred EEEeCCCCCCcHHHHHHHHH
Confidence 88887777888888888776
No 19
>PRK11204 N-glycosyltransferase; Provisional
Probab=98.99 E-value=5.8e-09 Score=101.14 Aligned_cols=81 Identities=19% Similarity=0.274 Sum_probs=63.4
Q ss_pred CCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhC-CCC
Q 022795 102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFG-IKT 180 (292)
Q Consensus 102 ~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~g-v~~ 180 (292)
....|.|+|+||+|| |+ +.+.+|+.|+++++|| +.+|+|+|||++|.|.+.+.+ +++++. +.
T Consensus 50 ~~~~p~vsViIp~yn---e~-~~i~~~l~sl~~q~yp--~~eiiVvdD~s~d~t~~~l~~----------~~~~~~~v~- 112 (420)
T PRK11204 50 LKEYPGVSILVPCYN---EG-ENVEETISHLLALRYP--NYEVIAINDGSSDNTGEILDR----------LAAQIPRLR- 112 (420)
T ss_pred cCCCCCEEEEEecCC---CH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCccHHHHHHH----------HHHhCCcEE-
Confidence 345799999999999 76 7899999999999999 799999999999976655443 344443 44
Q ss_pred CCCccceeCCCCCCCCCChhhhHHH
Q 022795 181 ICPEAYFSDPENGDGDSGNAEFIVE 205 (292)
Q Consensus 181 R~P~~Yf~r~~~~~~kagn~n~a~~ 205 (292)
++..+.|.+ |++++|.+.+
T Consensus 113 -----~i~~~~n~G-ka~aln~g~~ 131 (420)
T PRK11204 113 -----VIHLAENQG-KANALNTGAA 131 (420)
T ss_pred -----EEEcCCCCC-HHHHHHHHHH
Confidence 776566644 7888888766
No 20
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=98.74 E-value=3.1e-08 Score=87.73 Aligned_cols=84 Identities=23% Similarity=0.267 Sum_probs=63.0
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCCCCCCcc
Q 022795 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEA 185 (292)
Q Consensus 106 P~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R~P~~ 185 (292)
|.|+|+||+|| |+ +.+.++|.|+++++||.+++.|+|+|| ++|.|.+.+.+.. +.|. .+...+.
T Consensus 1 p~vSViIp~yN---e~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~---~~~~--~~~~~i~------ 64 (232)
T cd06437 1 PMVTVQLPVFN---EK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIV---EEYA--AQGVNIK------ 64 (232)
T ss_pred CceEEEEecCC---cH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHH---HHHh--hcCCceE------
Confidence 67999999999 76 789999999999999998899999998 8888888776532 1110 1122333
Q ss_pred ceeCCCCCCCCCChhhhHHH
Q 022795 186 YFSDPENGDGDSGNAEFIVE 205 (292)
Q Consensus 186 Yf~r~~~~~~kagn~n~a~~ 205 (292)
++.+..+.+.|++++|.+.+
T Consensus 65 ~~~~~~~~G~k~~a~n~g~~ 84 (232)
T cd06437 65 HVRRADRTGYKAGALAEGMK 84 (232)
T ss_pred EEECCCCCCCchHHHHHHHH
Confidence 77777666667777876665
No 21
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=98.73 E-value=9.6e-08 Score=92.15 Aligned_cols=52 Identities=17% Similarity=0.243 Sum_probs=45.0
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHH
Q 022795 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMR 160 (292)
Q Consensus 103 ~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ 160 (292)
...|.|+|+||+|| |+ +.+.+|+.|++++||| .++|+|.||+++|.|.+.+.
T Consensus 38 ~~~p~VSViiP~~n---ee-~~l~~~L~Sl~~q~Yp--~~EIivvdd~s~D~t~~iv~ 89 (373)
T TIGR03472 38 RAWPPVSVLKPLHG---DE-PELYENLASFCRQDYP--GFQMLFGVQDPDDPALAVVR 89 (373)
T ss_pred CCCCCeEEEEECCC---CC-hhHHHHHHHHHhcCCC--CeEEEEEeCCCCCcHHHHHH
Confidence 34799999999999 87 5789999999999999 49999999999997765544
No 22
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=98.70 E-value=2e-08 Score=89.43 Aligned_cols=82 Identities=23% Similarity=0.404 Sum_probs=61.3
Q ss_pred CCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCCCC
Q 022795 102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTI 181 (292)
Q Consensus 102 ~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R 181 (292)
....|.|.|+||||| |+ ..+.+++.++.+.+||.++++|+|+|||++|.|.+.+.+ ++++ ++.
T Consensus 25 ~~~~~~isVvip~~n---~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~----------~~~~-~v~-- 87 (251)
T cd06439 25 PAYLPTVTIIIPAYN---EE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIARE----------YADK-GVK-- 87 (251)
T ss_pred CCCCCEEEEEEecCC---cH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHH----------HhhC-cEE--
Confidence 456899999999998 66 789999999999999987799999999999966554442 3333 455
Q ss_pred CCccceeCCCCCCCCCChhhhHHH
Q 022795 182 CPEAYFSDPENGDGDSGNAEFIVE 205 (292)
Q Consensus 182 ~P~~Yf~r~~~~~~kagn~n~a~~ 205 (292)
++..+.+.+ ++++.|.+.+
T Consensus 88 ----~i~~~~~~g-~~~a~n~gi~ 106 (251)
T cd06439 88 ----LLRFPERRG-KAAALNRALA 106 (251)
T ss_pred ----EEEcCCCCC-hHHHHHHHHH
Confidence 666555533 4556665444
No 23
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=98.68 E-value=2e-07 Score=90.42 Aligned_cols=55 Identities=29% Similarity=0.337 Sum_probs=48.0
Q ss_pred CCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHH
Q 022795 102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMRE 161 (292)
Q Consensus 102 ~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~e 161 (292)
++..|.|+|+||+|| |+ +.+.+++.|+++.+||. +++|+|+|||++|.|.+.+.+
T Consensus 36 ~~~~p~VSVIIpa~N---e~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~ 90 (384)
T TIGR03469 36 PEAWPAVVAVVPARN---EA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARA 90 (384)
T ss_pred CCCCCCEEEEEecCC---cH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHH
Confidence 456899999999999 77 78999999999999995 589999999999977666554
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=98.60 E-value=1.7e-07 Score=82.81 Aligned_cols=80 Identities=25% Similarity=0.398 Sum_probs=59.4
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCCCCCCcccee
Q 022795 109 DVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFS 188 (292)
Q Consensus 109 DVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R~P~~Yf~ 188 (292)
.|+||||| |+++.+.+++.|+.+++|| +.+|+|+|||++|-|.....+ .+|++++.+ -.++.
T Consensus 1 siiip~~n---e~~~~l~~~l~sl~~q~~~--~~eiiVvdd~s~D~t~~~~i~---------~~~~~~~~~----i~~i~ 62 (236)
T cd06435 1 SIHVPCYE---EPPEMVKETLDSLAALDYP--NFEVIVIDNNTKDEALWKPVE---------AHCAQLGER----FRFFH 62 (236)
T ss_pred CeeEeeCC---CcHHHHHHHHHHHHhCCCC--CcEEEEEeCCCCchhHHHHHH---------HHHHHhCCc----EEEEE
Confidence 48999999 8889999999999999999 689999999999966522211 456665532 12566
Q ss_pred CCCCCCCCCChhhhHHHH
Q 022795 189 DPENGDGDSGNAEFIVER 206 (292)
Q Consensus 189 r~~~~~~kagn~n~a~~~ 206 (292)
...+.+.|+|++|.+.+.
T Consensus 63 ~~~~~G~~~~a~n~g~~~ 80 (236)
T cd06435 63 VEPLPGAKAGALNYALER 80 (236)
T ss_pred cCCCCCCchHHHHHHHHh
Confidence 665566678888876554
No 25
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=98.55 E-value=7.3e-07 Score=90.21 Aligned_cols=83 Identities=12% Similarity=0.178 Sum_probs=61.8
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHH-hcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhC-CCC
Q 022795 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSA-MALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFG-IKT 180 (292)
Q Consensus 103 ~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~-lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~g-v~~ 180 (292)
...|.|+|+||+|| |. +++.+||.++ .++||| +++|+|+||++++.|.+.+.+. ++++. +.
T Consensus 63 ~~~p~vaIlIPA~N---E~-~vI~~~l~s~L~~ldY~--~~eIiVv~d~ndd~T~~~v~~l----------~~~~p~v~- 125 (504)
T PRK14716 63 VPEKRIAIFVPAWR---EA-DVIGRMLEHNLATLDYE--NYRIFVGTYPNDPATLREVDRL----------AARYPRVH- 125 (504)
T ss_pred CCCCceEEEEeccC---ch-hHHHHHHHHHHHcCCCC--CeEEEEEECCCChhHHHHHHHH----------HHHCCCeE-
Confidence 34899999999999 87 7999999986 579998 8999999999999887766653 34432 22
Q ss_pred CCCccceeCCCCCCCCCChhhhHHHH
Q 022795 181 ICPEAYFSDPENGDGDSGNAEFIVER 206 (292)
Q Consensus 181 R~P~~Yf~r~~~~~~kagn~n~a~~~ 206 (292)
......+.+..|++++|++.+.
T Consensus 126 ----~vv~~~~gp~~Ka~aLN~~l~~ 147 (504)
T PRK14716 126 ----LVIVPHDGPTSKADCLNWIYQA 147 (504)
T ss_pred ----EEEeCCCCCCCHHHHHHHHHHH
Confidence 1222233356788899987653
No 26
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=98.51 E-value=3.2e-07 Score=82.15 Aligned_cols=51 Identities=27% Similarity=0.305 Sum_probs=45.6
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHH
Q 022795 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMR 160 (292)
Q Consensus 106 P~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ 160 (292)
|.|+|+||+|| |+ +.+.+|+.|+++++||.++++|+|+|||++|.|.+.+.
T Consensus 1 p~vsIiIp~~N---e~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~ 51 (241)
T cd06427 1 PVYTILVPLYK---EA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAAR 51 (241)
T ss_pred CeEEEEEecCC---cH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHH
Confidence 78999999999 87 78999999999999998889999999999996655544
No 27
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=98.47 E-value=1.2e-06 Score=92.26 Aligned_cols=85 Identities=14% Similarity=0.243 Sum_probs=62.1
Q ss_pred CCCCCceEEEEecCCCCCCChHHHHHHHHHHh-cCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhC-CC
Q 022795 102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAM-ALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFG-IK 179 (292)
Q Consensus 102 ~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~l-alDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~g-v~ 179 (292)
.++.|.|+|+||+|| |+ .++.+|+.+++ ++||| +++|+|.||++++-|.+.+. .+|++++ +.
T Consensus 59 ~~~~~~vsIlVPa~n---E~-~vi~~~i~~ll~~ldYP--~~eI~vi~~~nD~~T~~~~~----------~l~~~~p~~~ 122 (727)
T PRK11234 59 KPDEKPLAIMVPAWN---ET-GVIGNMAELAATTLDYE--NYHIFVGTYPNDPATQADVD----------AVCARFPNVH 122 (727)
T ss_pred cCCCCCEEEEEecCc---ch-hhHHHHHHHHHHhCCCC--CeEEEEEecCCChhHHHHHH----------HHHHHCCCcE
Confidence 455699999999999 88 89999999987 79999 59999998877775555444 4566664 11
Q ss_pred CCCCccceeCCCCCCCCCChhhhHHHHH
Q 022795 180 TICPEAYFSDPENGDGDSGNAEFIVERE 207 (292)
Q Consensus 180 ~R~P~~Yf~r~~~~~~kagn~n~a~~~~ 207 (292)
.....+.+ ...|++++|++.+.-
T Consensus 123 ----~v~~~~~g-~~gKa~aLN~~l~~~ 145 (727)
T PRK11234 123 ----KVVCARPG-PTSKADCLNNVLDAI 145 (727)
T ss_pred ----EEEeCCCC-CCCHHHHHHHHHHHH
Confidence 01223322 356999999887653
No 28
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=98.42 E-value=5.7e-07 Score=78.03 Aligned_cols=49 Identities=16% Similarity=0.308 Sum_probs=42.3
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHH
Q 022795 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMR 160 (292)
Q Consensus 106 P~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ 160 (292)
|.|+|+||+|| |+. .+.+++.|+++.+|| .++|+|+|||+++-|.+.+.
T Consensus 1 p~vsviip~~n---~~~-~l~~~L~sl~~q~~~--~~eiivVdd~s~d~t~~~~~ 49 (196)
T cd02520 1 PGVSILKPLCG---VDP-NLYENLESFFQQDYP--KYEILFCVQDEDDPAIPVVR 49 (196)
T ss_pred CCeEEEEecCC---CCc-cHHHHHHHHHhccCC--CeEEEEEeCCCcchHHHHHH
Confidence 67999999999 763 589999999999999 59999999999996665444
No 29
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=98.39 E-value=7.1e-07 Score=76.49 Aligned_cols=43 Identities=30% Similarity=0.377 Sum_probs=39.1
Q ss_pred EEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccH
Q 022795 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITL 156 (292)
Q Consensus 110 VfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~ 156 (292)
|+||+|| |+ +.+..|+.++++++||.++++|+|+|||++|-|.
T Consensus 1 VvIp~~n---e~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~ 43 (183)
T cd06438 1 ILIPAHN---EE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTA 43 (183)
T ss_pred CEEeccc---hH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHH
Confidence 6899999 77 8999999999999999888999999999999543
No 30
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=98.29 E-value=4.5e-07 Score=82.09 Aligned_cols=41 Identities=29% Similarity=0.338 Sum_probs=39.1
Q ss_pred EEEecCCCCCCChHHHHHHHHHHhcCCCC--------CCCcEEEEEcCCCCc
Q 022795 110 VFICTADPTKEPTVEVMNTVLSAMALDYP--------PEKLHVYLSDDGGAS 153 (292)
Q Consensus 110 VfI~Tynp~~Ep~~vv~~Tvls~lalDYP--------~~kl~VyVlDDG~s~ 153 (292)
|+||+|| |++.++.+||.|++++||| .++++|+|+|||+++
T Consensus 1 v~ip~yN---E~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d 49 (244)
T cd04190 1 VCVTMYN---EDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK 49 (244)
T ss_pred CEEeeec---CCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc
Confidence 6899999 9878999999999999999 789999999999998
No 31
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=98.23 E-value=3.1e-06 Score=72.55 Aligned_cols=77 Identities=18% Similarity=0.144 Sum_probs=55.6
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCCCCCCcccee
Q 022795 109 DVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFS 188 (292)
Q Consensus 109 DVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R~P~~Yf~ 188 (292)
.|+||||| .|.++.+.+|+.|+++.+|| ..+++|+|||+++.+...+.+ .+++++++. ++.
T Consensus 1 sviip~~n--~~~~~~l~~~l~Sl~~q~~~--~~eiiivdd~ss~d~t~~~~~---------~~~~~~~i~------~i~ 61 (201)
T cd04195 1 SVLMSVYI--KEKPEFLREALESILKQTLP--PDEVVLVKDGPVTQSLNEVLE---------EFKRKLPLK------VVP 61 (201)
T ss_pred CEEEEccc--cchHHHHHHHHHHHHhcCCC--CcEEEEEECCCCchhHHHHHH---------HHHhcCCeE------EEE
Confidence 48999999 45578999999999999999 479999999996543333322 455666666 888
Q ss_pred CCCCCCCCCChhhhHHH
Q 022795 189 DPENGDGDSGNAEFIVE 205 (292)
Q Consensus 189 r~~~~~~kagn~n~a~~ 205 (292)
.+.|.| .+++.|.+.+
T Consensus 62 ~~~n~G-~~~a~N~g~~ 77 (201)
T cd04195 62 LEKNRG-LGKALNEGLK 77 (201)
T ss_pred cCcccc-HHHHHHHHHH
Confidence 776643 2345666554
No 32
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.22 E-value=3.4e-06 Score=72.43 Aligned_cols=47 Identities=23% Similarity=0.271 Sum_probs=41.1
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHH
Q 022795 109 DVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMRE 161 (292)
Q Consensus 109 DVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~e 161 (292)
+|+||||| |+ ..+.+++.|+++.+|| +++|+|+|||++|.|.+.+.+
T Consensus 1 sIvIp~yn---~~-~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~ 47 (214)
T cd04196 1 AVLMATYN---GE-KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKE 47 (214)
T ss_pred CEEEEecC---cH-HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHH
Confidence 48999998 66 7899999999999999 799999999999977666553
No 33
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=98.21 E-value=6e-06 Score=70.70 Aligned_cols=51 Identities=18% Similarity=0.300 Sum_probs=43.6
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHH
Q 022795 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMRE 161 (292)
Q Consensus 106 P~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~e 161 (292)
|.|+|+||||| |+.+.+.+|+.|+++..|| ..+|+|+|||+++-+.+.+.+
T Consensus 1 p~vsiii~~~n---~~~~~l~~~l~sl~~q~~~--~~eiivvd~gs~d~~~~~~~~ 51 (202)
T cd04184 1 PLISIVMPVYN---TPEKYLREAIESVRAQTYP--NWELCIADDASTDPEVKRVLK 51 (202)
T ss_pred CeEEEEEeccc---CcHHHHHHHHHHHHhCcCC--CeEEEEEeCCCCChHHHHHHH
Confidence 67999999998 6667899999999999998 589999999999866555443
No 34
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=98.17 E-value=1.9e-05 Score=75.57 Aligned_cols=55 Identities=16% Similarity=0.222 Sum_probs=42.2
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHhcC------CCCCCCcEEEEEcCCCCcccHHHHHH
Q 022795 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSAMAL------DYPPEKLHVYLSDDGGASITLLGMRE 161 (292)
Q Consensus 103 ~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lal------DYP~~kl~VyVlDDG~s~~T~~~l~e 161 (292)
...|.|+|+||+|| |+ ..+..++.++.+. ++|....+|+|+|||++|.|.+.+.+
T Consensus 67 ~~~~~isVVIP~yN---e~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~ 127 (333)
T PTZ00260 67 DSDVDLSIVIPAYN---EE-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKD 127 (333)
T ss_pred CCCeEEEEEEeeCC---CH-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHH
Confidence 34689999999999 76 5677877776653 24545799999999999988766543
No 35
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=98.17 E-value=2.5e-07 Score=81.13 Aligned_cols=78 Identities=26% Similarity=0.398 Sum_probs=48.4
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHh---CCCCCC
Q 022795 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRF---GIKTIC 182 (292)
Q Consensus 106 P~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~---gv~~R~ 182 (292)
|.|+|+||+|| |+ +.+.+||.|+++++|| +++|+|+||++++.|.+.+. .+|.++ ++.
T Consensus 1 P~v~Vvip~~~---~~-~~l~~~l~sl~~~~~~--~~~v~vvd~~~~~~~~~~~~----------~~~~~~~~~~v~--- 61 (228)
T PF13641_consen 1 PRVSVVIPAYN---ED-DVLRRCLESLLAQDYP--RLEVVVVDDGSDDETAEILR----------ALAARYPRVRVR--- 61 (228)
T ss_dssp --EEEE--BSS----H-HHHHHHHHHHTTSHHH--TEEEEEEEE-SSS-GCTTHH----------HHHHTTGG-GEE---
T ss_pred CEEEEEEEecC---CH-HHHHHHHHHHHcCCCC--CeEEEEEECCCChHHHHHHH----------HHHHHcCCCceE---
Confidence 78999999998 76 6999999999999996 69999999999986554433 344444 234
Q ss_pred CccceeCCCCCC--CCCChhhhHHH
Q 022795 183 PEAYFSDPENGD--GDSGNAEFIVE 205 (292)
Q Consensus 183 P~~Yf~r~~~~~--~kagn~n~a~~ 205 (292)
++.++.+.+ .|++++|.+.+
T Consensus 62 ---vi~~~~~~g~~~k~~a~n~~~~ 83 (228)
T PF13641_consen 62 ---VIRRPRNPGPGGKARALNEALA 83 (228)
T ss_dssp ---EEE----HHHHHHHHHHHHHHH
T ss_pred ---EeecCCCCCcchHHHHHHHHHH
Confidence 776664433 34455555544
No 36
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.11 E-value=5.3e-06 Score=66.10 Aligned_cols=52 Identities=23% Similarity=0.241 Sum_probs=45.4
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHH
Q 022795 105 LPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREA 162 (292)
Q Consensus 105 lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea 162 (292)
.|.+.|+||||| |+ ..+..+|.|+++..|+. .+|+|+|||++|.|.+.+.+.
T Consensus 2 ~~~~siiip~~n---~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~~~~~~ 53 (291)
T COG0463 2 MPKVSVVIPTYN---EE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTEIAIEY 53 (291)
T ss_pred CccEEEEEeccc---hh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHHHHHHH
Confidence 478999999999 66 89999999999999994 789999999999877766543
No 37
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=98.01 E-value=3.8e-05 Score=80.56 Aligned_cols=46 Identities=11% Similarity=0.255 Sum_probs=39.2
Q ss_pred CCCCCceEEEEecCCCCCCChHHHHHHHHHHh-cCCCCCCCcEEEE---EcCCCCc
Q 022795 102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAM-ALDYPPEKLHVYL---SDDGGAS 153 (292)
Q Consensus 102 ~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~l-alDYP~~kl~VyV---lDDG~s~ 153 (292)
+.+.|.|+|+||+|| |. +++.+||.+++ ++||| ++.|+| .|||.+.
T Consensus 67 ~~~~~~vsIlVPa~n---E~-~VI~~~v~~ll~~ldYp--~~~I~v~~~~nD~~T~ 116 (703)
T PRK15489 67 ERDEQPLAIMVPAWK---EY-DVIAKMIENMLATLDYR--RYVIFVGTYPNDAETI 116 (703)
T ss_pred ccCCCceEEEEeCCC---cH-HHHHHHHHHHHhcCCCC--CeEEEEEecCCCccHH
Confidence 345689999999999 87 99999999986 89999 789999 5887444
No 38
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.99 E-value=9.8e-06 Score=70.27 Aligned_cols=47 Identities=34% Similarity=0.416 Sum_probs=41.7
Q ss_pred EEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHH
Q 022795 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMR 160 (292)
Q Consensus 110 VfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ 160 (292)
|+||||| |+ +.+.+||.|++..+||.++++|+|+|||+++.|.+.+.
T Consensus 1 viip~~n---~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~ 47 (229)
T cd04192 1 VVIAARN---EA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILE 47 (229)
T ss_pred CEEEecC---cH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHH
Confidence 6899998 66 88999999999999998789999999999997766544
No 39
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=97.93 E-value=3.9e-05 Score=67.37 Aligned_cols=50 Identities=16% Similarity=0.216 Sum_probs=42.7
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHH
Q 022795 107 GIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMR 160 (292)
Q Consensus 107 ~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ 160 (292)
.|+|+||||| |+ +.+.+++.++.+.+||..+.+|+|+|||+++.|.+.+.
T Consensus 1 ~~sIiip~~n---~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~ 50 (249)
T cd02525 1 FVSIIIPVRN---EE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQ 50 (249)
T ss_pred CEEEEEEcCC---ch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHH
Confidence 3899999998 66 68899999999999997789999999999996544433
No 40
>PRK10063 putative glycosyl transferase; Provisional
Probab=97.93 E-value=1.8e-05 Score=72.59 Aligned_cols=51 Identities=16% Similarity=0.033 Sum_probs=40.8
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHhcCC-CCCCCcEEEEEcCCCCcccHHHHH
Q 022795 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALD-YPPEKLHVYLSDDGGASITLLGMR 160 (292)
Q Consensus 106 P~VDVfI~Tynp~~Ep~~vv~~Tvls~lalD-YP~~kl~VyVlDDG~s~~T~~~l~ 160 (292)
|.|+|+||||| |+ +.+..|+.|+.++. .+...++|+|+|||++|-|.+.+.
T Consensus 1 ~~vSVIi~~yN---~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~ 52 (248)
T PRK10063 1 MLLSVITVAFR---NL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLE 52 (248)
T ss_pred CeEEEEEEeCC---CH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHH
Confidence 67999999999 65 68999999998642 233379999999999997766544
No 41
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=97.87 E-value=5.6e-06 Score=67.05 Aligned_cols=64 Identities=27% Similarity=0.280 Sum_probs=46.9
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCCCCCCcccee
Q 022795 109 DVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFS 188 (292)
Q Consensus 109 DVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R~P~~Yf~ 188 (292)
+|+||||| | ++.+.+|+.|++...++ ..+|+|+|||+++.|.+.+.+.. . ...++. |+.
T Consensus 1 Svvip~~n---~-~~~l~~~l~sl~~q~~~--~~eiivvdd~s~d~~~~~~~~~~-------~--~~~~i~------~i~ 59 (169)
T PF00535_consen 1 SVVIPTYN---E-AEYLERTLESLLKQTDP--DFEIIVVDDGSTDETEEILEEYA-------E--SDPNIR------YIR 59 (169)
T ss_dssp EEEEEESS-----TTTHHHHHHHHHHHSGC--EEEEEEEECS-SSSHHHHHHHHH-------C--CSTTEE------EEE
T ss_pred CEEEEeeC---C-HHHHHHHHHHHhhccCC--CEEEEEecccccccccccccccc-------c--cccccc------ccc
Confidence 68999999 6 48999999999999666 79999999999996655544422 1 233555 888
Q ss_pred CCCCC
Q 022795 189 DPENG 193 (292)
Q Consensus 189 r~~~~ 193 (292)
.+.+.
T Consensus 60 ~~~n~ 64 (169)
T PF00535_consen 60 NPENL 64 (169)
T ss_dssp HCCCS
T ss_pred ccccc
Confidence 88663
No 42
>PRK10018 putative glycosyl transferase; Provisional
Probab=97.85 E-value=5.4e-05 Score=70.97 Aligned_cols=44 Identities=20% Similarity=0.337 Sum_probs=39.2
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCc
Q 022795 104 QLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGAS 153 (292)
Q Consensus 104 ~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~ 153 (292)
..|.|.|+||||| ++ ..+.+||.|+++..|| ..+|+|+|||+++
T Consensus 3 ~~p~VSVIip~yN---~~-~~l~~~l~Svl~Qt~~--~~EiIVVDDgS~~ 46 (279)
T PRK10018 3 DNPLISIYMPTWN---RQ-QLAIRAIKSVLRQDYS--NWEMIIVDDCSTS 46 (279)
T ss_pred CCCEEEEEEEeCC---CH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCC
Confidence 3589999999999 66 5678999999999999 6999999999984
No 43
>PRK10073 putative glycosyl transferase; Provisional
Probab=97.83 E-value=3.7e-05 Score=73.41 Aligned_cols=50 Identities=14% Similarity=0.223 Sum_probs=44.1
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHH
Q 022795 105 LPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMR 160 (292)
Q Consensus 105 lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ 160 (292)
.|.|+|+||+|| ++ ..+.+|+.|+++..|+ .++|+|+|||++|.|.+.+.
T Consensus 5 ~p~vSVIIP~yN---~~-~~L~~~l~Sl~~Qt~~--~~EIIiVdDgStD~t~~i~~ 54 (328)
T PRK10073 5 TPKLSIIIPLYN---AG-KDFRAFMESLIAQTWT--ALEIIIVNDGSTDNSVEIAK 54 (328)
T ss_pred CCeEEEEEeccC---CH-HHHHHHHHHHHhCCCC--CeEEEEEeCCCCccHHHHHH
Confidence 488999999999 55 7999999999999998 79999999999997765544
No 44
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.77 E-value=6.7e-05 Score=63.14 Aligned_cols=46 Identities=17% Similarity=0.272 Sum_probs=39.8
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHH
Q 022795 109 DVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMR 160 (292)
Q Consensus 109 DVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ 160 (292)
+|+||||| ++ +.+.+++.|+.+..|| .++|+|+|||+++.|.+.+.
T Consensus 1 sivi~~~n---~~-~~l~~~l~sl~~q~~~--~~evivvDd~s~d~~~~~~~ 46 (202)
T cd06433 1 SIITPTYN---QA-ETLEETIDSVLSQTYP--NIEYIVIDGGSTDGTVDIIK 46 (202)
T ss_pred CEEEeccc---hH-HHHHHHHHHHHhCCCC--CceEEEEeCCCCccHHHHHH
Confidence 48999998 65 8999999999999998 49999999999997765554
No 45
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.73 E-value=4.1e-05 Score=65.93 Aligned_cols=45 Identities=13% Similarity=0.087 Sum_probs=38.3
Q ss_pred EEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHH
Q 022795 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMR 160 (292)
Q Consensus 110 VfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ 160 (292)
|+||||| |+ ..+.+++.|+++..|| ..+|+|+|||+++.|.+.+.
T Consensus 1 viI~~~n---~~-~~l~~~l~sl~~q~~~--~~eiiivD~~s~d~t~~~~~ 45 (202)
T cd04185 1 AVVVTYN---RL-DLLKECLDALLAQTRP--PDHIIVIDNASTDGTAEWLT 45 (202)
T ss_pred CEEEeeC---CH-HHHHHHHHHHHhccCC--CceEEEEECCCCcchHHHHH
Confidence 6899998 66 7899999999999999 56899999999996554443
No 46
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=97.69 E-value=7.7e-05 Score=62.77 Aligned_cols=45 Identities=20% Similarity=0.232 Sum_probs=38.2
Q ss_pred EEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHH
Q 022795 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMR 160 (292)
Q Consensus 110 VfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ 160 (292)
|+||+|| |+ +.+.+||.|+.+..|+ ..+|+|+|||+++.|.+.+.
T Consensus 1 ivip~~n---~~-~~l~~~l~sl~~q~~~--~~eiivvdd~s~d~t~~~~~ 45 (182)
T cd06420 1 LIITTYN---RP-EALELVLKSVLNQSIL--PFEVIIADDGSTEETKELIE 45 (182)
T ss_pred CEEeecC---Ch-HHHHHHHHHHHhccCC--CCEEEEEeCCCchhHHHHHH
Confidence 6799998 66 7899999999999988 68999999999996655443
No 47
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.69 E-value=0.0027 Score=64.65 Aligned_cols=164 Identities=18% Similarity=0.201 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHH--HH--HHH-HHHHHHHhhcccCCCCCCCC-CCC
Q 022795 28 INRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAEL--LL--SFQ-WLLGIAYRWRPISRTVFPER-LPE 101 (292)
Q Consensus 28 ~~R~~~~~~~~~l~~yl~wR~~~tl~~~~~~~~~~~~wl~l~~aE~--~~--~~~-~ll~~~~~~~pv~r~~~~~~-l~~ 101 (292)
+.|++.+...++....-.|-...+++..+. ..+-..++.+++-+ |. +|. .+.+++....--+|..-.+. -|
T Consensus 63 lRR~~L~~~tla~tv~at~~m~~vl~~gG~--~~le~~iL~Lfa~lFcwvs~~F~tAl~GF~~L~~~~~r~~~~~p~~p- 139 (736)
T COG2943 63 LRRYILLGLTLAQTVVATWYMKTVLPYGGP--YMLEAGILVLFAVLFCWVSAGFWTALMGFLVLLFGRDRYLSIAPNEP- 139 (736)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccccCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecCCCcCCCCCCCC-
Confidence 677777777777666666666666654332 22222222222211 11 121 22222222211122110110 11
Q ss_pred CCCCCceEEEEecCCCCCCChHHHH----HHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhC
Q 022795 102 ADQLPGIDVFICTADPTKEPTVEVM----NTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFG 177 (292)
Q Consensus 102 ~~~lP~VDVfI~Tynp~~Ep~~vv~----~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~g 177 (292)
-.++-+-.|++|+|| |++.-|- .|..|+.+-. -.+++.++|+.|.+++. -++.|.++ |..||++.+
T Consensus 140 ~p~~hrTAilmPiyn---Ed~~rVfAgLrA~~eSla~Tg-~~~~FD~FVLSDs~dpd--ialAEq~a----~~~l~~e~~ 209 (736)
T COG2943 140 LPDLHRTAILMPIYN---EDVNRVFAGLRATYESLAATG-HAEHFDFFVLSDSRDPD--IALAEQKA----WAELCRELG 209 (736)
T ss_pred CCcccceeEEeeccc---cCHHHHHHHHHHHHHHHHhhC-CcccceEEEEcCCCCch--hhhhHHHH----HHHHHHHhC
Confidence 123446889999999 9987654 4445544443 23589999999999883 24455543 669999998
Q ss_pred CCCCCCccceeCCCCCCCCCChh-hhHHHH
Q 022795 178 IKTICPEAYFSDPENGDGDSGNA-EFIVER 206 (292)
Q Consensus 178 v~~R~P~~Yf~r~~~~~~kagn~-n~a~~~ 206 (292)
-+. --.|=.|..|...|+||+ .|...|
T Consensus 210 g~~--~ifYRrRr~n~~RKaGNIaDfcrRw 237 (736)
T COG2943 210 GEG--NIFYRRRRRNVKRKAGNIADFCRRW 237 (736)
T ss_pred CCC--ceeeehHhhhhcccccCHHHHHHHh
Confidence 431 122444667889999997 444443
No 48
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=97.67 E-value=9.9e-05 Score=70.05 Aligned_cols=53 Identities=19% Similarity=0.075 Sum_probs=42.1
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHH
Q 022795 104 QLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMR 160 (292)
Q Consensus 104 ~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ 160 (292)
.-|.|+|+||||| |+ ..+.++|.++.+..++....+|+|+|||++|.|.+.+.
T Consensus 29 ~~~~vSVVIPayN---ee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~ 81 (306)
T PRK13915 29 AGRTVSVVLPALN---EE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAA 81 (306)
T ss_pred CCCCEEEEEecCC---cH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHH
Confidence 4589999999999 77 67899999998765522246999999999997655544
No 49
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=97.65 E-value=0.00011 Score=66.01 Aligned_cols=54 Identities=13% Similarity=0.106 Sum_probs=39.1
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHH
Q 022795 104 QLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMRE 161 (292)
Q Consensus 104 ~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~e 161 (292)
..|.|+|+||||| |. ..+..++.++.........++|+|+|||++|.|.+.+.+
T Consensus 7 ~~~~vsVvIp~yn---e~-~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~ 60 (243)
T PLN02726 7 GAMKYSIIVPTYN---ER-LNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQ 60 (243)
T ss_pred CCceEEEEEccCC---ch-hhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHH
Confidence 4689999999999 66 456666665543322222799999999999987766553
No 50
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=97.60 E-value=0.00012 Score=64.25 Aligned_cols=46 Identities=22% Similarity=0.236 Sum_probs=40.7
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHH
Q 022795 107 GIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGM 159 (292)
Q Consensus 107 ~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l 159 (292)
+|+|+||||| |+++.+.+|+.++.+++ | .+|+|+|||+++.|.+.+
T Consensus 1 ~isVvIp~~n---e~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l 46 (235)
T cd06434 1 DVTVIIPVYD---EDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSIL 46 (235)
T ss_pred CeEEEEeecC---CChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHH
Confidence 4899999999 88899999999999998 4 689999999999666555
No 51
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=97.60 E-value=9.6e-05 Score=64.79 Aligned_cols=47 Identities=9% Similarity=0.111 Sum_probs=40.3
Q ss_pred EEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHH
Q 022795 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMRE 161 (292)
Q Consensus 110 VfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~e 161 (292)
|+||||| ++ ..+..|+.|+++.+|| +..+|+|+|||++|-|.+.+.+
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t~~i~~~ 47 (219)
T cd06913 1 IILPVHN---GE-QWLDECLESVLQQDFE-GTLELSVFNDASTDKSAEIIEK 47 (219)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCCC-CCEEEEEEeCCCCccHHHHHHH
Confidence 6899998 54 7999999999999998 4699999999999977655543
No 52
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=97.58 E-value=0.00017 Score=58.12 Aligned_cols=46 Identities=37% Similarity=0.517 Sum_probs=39.7
Q ss_pred EEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHH
Q 022795 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMRE 161 (292)
Q Consensus 110 VfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~e 161 (292)
|+||||| |+ +.+.+|+.++++..|+ ..+|+|+|||+++.|.+.+.+
T Consensus 1 Viip~~n---~~-~~l~~~l~sl~~q~~~--~~~iivvdd~s~d~t~~~~~~ 46 (180)
T cd06423 1 IIVPAYN---EE-AVIERTIESLLALDYP--KLEVIVVDDGSTDDTLEILEE 46 (180)
T ss_pred CeecccC---hH-HHHHHHHHHHHhCCCC--ceEEEEEeCCCccchHHHHHH
Confidence 6799998 66 8999999999999996 789999999999976665543
No 53
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=97.53 E-value=0.00014 Score=63.37 Aligned_cols=47 Identities=23% Similarity=0.167 Sum_probs=37.5
Q ss_pred EEEecCCCCCCChHHHHHHHHHHhcCCC--CCCCcEEEEEcCCCCcccHHHHH
Q 022795 110 VFICTADPTKEPTVEVMNTVLSAMALDY--PPEKLHVYLSDDGGASITLLGMR 160 (292)
Q Consensus 110 VfI~Tynp~~Ep~~vv~~Tvls~lalDY--P~~kl~VyVlDDG~s~~T~~~l~ 160 (292)
|+||+|| |+ ..+..++.++++..+ +....+|+|+|||++|-|.+.+.
T Consensus 1 iiip~yN---~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~ 49 (211)
T cd04188 1 VVIPAYN---EE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVAR 49 (211)
T ss_pred CEEcccC---hH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHH
Confidence 6899999 66 788999999888755 44479999999999996655544
No 54
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=97.52 E-value=0.00022 Score=60.03 Aligned_cols=48 Identities=23% Similarity=0.146 Sum_probs=40.6
Q ss_pred EEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHH
Q 022795 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMRE 161 (292)
Q Consensus 110 VfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~e 161 (292)
|+||+|| |+ ..+.+|+.++....|+....+|+|+|||+++.|.+.+.+
T Consensus 1 iii~~~n---~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~ 48 (185)
T cd04179 1 VVIPAYN---EE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARE 48 (185)
T ss_pred CeecccC---hH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHH
Confidence 6899998 65 789999999999998655799999999999977665554
No 55
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=97.51 E-value=0.00012 Score=63.45 Aligned_cols=44 Identities=23% Similarity=0.234 Sum_probs=38.1
Q ss_pred EEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHH
Q 022795 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMR 160 (292)
Q Consensus 110 VfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ 160 (292)
|+||+|| |+ ..+..||.++++++ | +++|+|+|||++|.|.+.+.
T Consensus 1 ViIp~~N---e~-~~l~~~l~sl~~~~-~--~~eIivvdd~S~D~t~~~~~ 44 (191)
T cd06436 1 VLVPCLN---EE-AVIQRTLASLLRNK-P--NFLVLVIDDASDDDTAGIVR 44 (191)
T ss_pred CEEeccc---cH-HHHHHHHHHHHhCC-C--CeEEEEEECCCCcCHHHHHh
Confidence 6899999 77 79999999999999 6 68999999999997655443
No 56
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=97.51 E-value=0.00016 Score=67.13 Aligned_cols=50 Identities=24% Similarity=0.175 Sum_probs=43.5
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHH
Q 022795 109 DVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMRE 161 (292)
Q Consensus 109 DVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~e 161 (292)
+|+||||| |+++.+.+||.|+++..||....+|+|+|||+++.|.+.+.+
T Consensus 1 SIIIp~~N---~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~ 50 (299)
T cd02510 1 SVIIIFHN---EALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLE 50 (299)
T ss_pred CEEEEEec---CcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHH
Confidence 48999999 777899999999999999865679999999999987776654
No 57
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=97.41 E-value=0.00035 Score=60.73 Aligned_cols=46 Identities=17% Similarity=0.054 Sum_probs=38.1
Q ss_pred EEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHH
Q 022795 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMR 160 (292)
Q Consensus 110 VfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ 160 (292)
|+||||| |+ ..+..++.++.+..|+ ...+|+|+|||++|-|.+.+.
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~~-~~~eiiiVDd~S~d~t~~~~~ 46 (224)
T cd06442 1 IIIPTYN---ER-ENIPELIERLDAALKG-IDYEIIVVDDNSPDGTAEIVR 46 (224)
T ss_pred CeEeccc---hh-hhHHHHHHHHHHhhcC-CCeEEEEEeCCCCCChHHHHH
Confidence 6899998 66 6789999999999982 369999999999997765444
No 58
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=97.41 E-value=0.00036 Score=62.35 Aligned_cols=41 Identities=20% Similarity=0.187 Sum_probs=33.8
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccH
Q 022795 107 GIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITL 156 (292)
Q Consensus 107 ~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~ 156 (292)
.|+|+||||| |+ ..+..||.|+.... -+|+|+|||++|-|.
T Consensus 1 ~isvii~~~N---e~-~~l~~~l~sl~~~~-----~eiivvD~gStD~t~ 41 (229)
T cd02511 1 TLSVVIITKN---EE-RNIERCLESVKWAV-----DEIIVVDSGSTDRTV 41 (229)
T ss_pred CEEEEEEeCC---cH-HHHHHHHHHHhccc-----CEEEEEeCCCCccHH
Confidence 3899999999 66 68999999997651 289999999999553
No 59
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.40 E-value=0.00026 Score=61.43 Aligned_cols=47 Identities=21% Similarity=0.223 Sum_probs=40.0
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHH
Q 022795 108 IDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMR 160 (292)
Q Consensus 108 VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ 160 (292)
|+|+||+|| |+ ..+.+++.|+++..|+ ..+|+|+|||+++.|.+.+.
T Consensus 1 vsvii~~~n---~~-~~l~~~l~sl~~q~~~--~~evivvdd~s~d~~~~~~~ 47 (221)
T cd02522 1 LSIIIPTLN---EA-ENLPRLLASLRRLNPL--PLEIIVVDGGSTDGTVAIAR 47 (221)
T ss_pred CEEEEEccC---cH-HHHHHHHHHHHhccCC--CcEEEEEeCCCCccHHHHHh
Confidence 689999998 66 5889999999999995 78999999999996655443
No 60
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.16 E-value=0.00079 Score=54.90 Aligned_cols=46 Identities=20% Similarity=0.279 Sum_probs=39.2
Q ss_pred EEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHH
Q 022795 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMRE 161 (292)
Q Consensus 110 VfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~e 161 (292)
|+||+|| | ++.+.+|+.++.+.+|| ..+++|+|||+.+.|.+.+.+
T Consensus 1 vii~~~~---~-~~~l~~~l~sl~~~~~~--~~~iiivdd~s~~~~~~~~~~ 46 (166)
T cd04186 1 IIIVNYN---S-LEYLKACLDSLLAQTYP--DFEVIVVDNASTDGSVELLRE 46 (166)
T ss_pred CEEEecC---C-HHHHHHHHHHHHhccCC--CeEEEEEECCCCchHHHHHHH
Confidence 6899998 6 58999999999999996 689999999999966555543
No 61
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=97.00 E-value=0.0011 Score=63.19 Aligned_cols=54 Identities=19% Similarity=0.202 Sum_probs=37.8
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHhc-CCCCCCCcEEEEEcCCCCcccHHHHHHH
Q 022795 105 LPGIDVFICTADPTKEPTVEVMNTVLSAMA-LDYPPEKLHVYLSDDGGASITLLGMREA 162 (292)
Q Consensus 105 lP~VDVfI~Tynp~~Ep~~vv~~Tvls~la-lDYP~~kl~VyVlDDG~s~~T~~~l~ea 162 (292)
.+.|+|+||+|| |+ +.+..++.++.+ ++-.....+|+|+|||++|.|.+.+.+.
T Consensus 5 ~~~vSVVIP~yN---E~-~~i~~~l~~l~~~~~~~~~~~EIIvVDDgS~D~T~~il~~~ 59 (325)
T PRK10714 5 IKKVSVVIPVYN---EQ-ESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAEMLVEA 59 (325)
T ss_pred CCeEEEEEcccC---ch-hhHHHHHHHHHHHHHhCCCCEEEEEEeCCCCCcHHHHHHHH
Confidence 467999999999 66 455555554432 1111125899999999999888877653
No 62
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=96.99 E-value=0.0021 Score=54.43 Aligned_cols=45 Identities=18% Similarity=0.126 Sum_probs=32.2
Q ss_pred EEEecCCCCCCChHHHHHHHHHHhcC---CCCCCCcEEEEEcCCCCcccHHHHH
Q 022795 110 VFICTADPTKEPTVEVMNTVLSAMAL---DYPPEKLHVYLSDDGGASITLLGMR 160 (292)
Q Consensus 110 VfI~Tynp~~Ep~~vv~~Tvls~lal---DYP~~kl~VyVlDDG~s~~T~~~l~ 160 (292)
|+||||| |+ ..+.+++.++..+ .++ ..+|+|+|||+++.|.+.+.
T Consensus 1 viIp~~n---~~-~~l~~~l~sl~~~~~~~~~--~~eiivvdd~s~d~t~~~~~ 48 (181)
T cd04187 1 IVVPVYN---EE-ENLPELYERLKAVLESLGY--DYEIIFVDDGSTDRTLEILR 48 (181)
T ss_pred CEEeecC---ch-hhHHHHHHHHHHHHHhcCC--CeEEEEEeCCCCccHHHHHH
Confidence 6899998 55 5666665555433 344 68999999999997765544
No 63
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=96.74 E-value=0.0048 Score=48.31 Aligned_cols=47 Identities=30% Similarity=0.332 Sum_probs=39.3
Q ss_pred EEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHH
Q 022795 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREA 162 (292)
Q Consensus 110 VfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea 162 (292)
|+||+|| |+ ..+..|+.+++..+|+ ..+++|+|||+++.+.+.+.+.
T Consensus 1 iii~~~~---~~-~~l~~~l~s~~~~~~~--~~~i~i~~~~~~~~~~~~~~~~ 47 (156)
T cd00761 1 VIIPAYN---EE-PYLERCLESLLAQTYP--NFEVIVVDDGSTDGTLEILEEY 47 (156)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCcc--ceEEEEEeCCCCccHHHHHHHH
Confidence 5799997 54 8999999999999995 6899999999998666655543
No 64
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=96.39 E-value=0.0063 Score=53.35 Aligned_cols=36 Identities=8% Similarity=0.084 Sum_probs=30.9
Q ss_pred EEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCc
Q 022795 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGAS 153 (292)
Q Consensus 110 VfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~ 153 (292)
+.||||| |+.+.+.+||.|+++. ..+|+|+|||+++
T Consensus 1 ~vI~~yn---~~~~~l~~~l~sl~~q-----~~~iivvDn~s~~ 36 (237)
T cd02526 1 AVVVTYN---PDLSKLKELLAALAEQ-----VDKVVVVDNSSGN 36 (237)
T ss_pred CEEEEec---CCHHHHHHHHHHHhcc-----CCEEEEEeCCCCc
Confidence 4699999 7778999999999986 3579999998877
No 65
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=95.41 E-value=0.041 Score=51.59 Aligned_cols=71 Identities=20% Similarity=0.321 Sum_probs=54.5
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCCCCCCc
Q 022795 105 LPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPE 184 (292)
Q Consensus 105 lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R~P~ 184 (292)
-|.|.+.|+||| +.+.+.+++.++.+.+||. ..+++.|+|+++.|.+.+.+.. .-+|.
T Consensus 2 ~~~i~~iiv~yn----~~~~l~~~l~~l~~~~~~~--~~iv~vDn~s~d~~~~~~~~~~-----------~~~v~----- 59 (305)
T COG1216 2 MPKISIIIVTYN----RGEDLVECLASLAAQTYPD--DVIVVVDNGSTDGSLEALKARF-----------FPNVR----- 59 (305)
T ss_pred CcceEEEEEecC----CHHHHHHHHHHHhcCCCCC--cEEEEccCCCCCCCHHHHHhhc-----------CCcEE-----
Confidence 378999999998 5689999999999999995 4555899999998777766521 23466
Q ss_pred cceeCCCCCCCCCC
Q 022795 185 AYFSDPENGDGDSG 198 (292)
Q Consensus 185 ~Yf~r~~~~~~kag 198 (292)
++....|.|.-+|
T Consensus 60 -~i~~~~NlG~agg 72 (305)
T COG1216 60 -LIENGENLGFAGG 72 (305)
T ss_pred -EEEcCCCccchhh
Confidence 8877777554444
No 66
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=94.97 E-value=0.11 Score=50.38 Aligned_cols=42 Identities=21% Similarity=0.305 Sum_probs=36.1
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCc
Q 022795 108 IDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGAS 153 (292)
Q Consensus 108 VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~ 153 (292)
+-|+|.||| .|+.+.+|+.++++..+-.+...+||++||+++
T Consensus 2 ~PVlv~ayN----Rp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~ 43 (334)
T cd02514 2 IPVLVIACN----RPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYE 43 (334)
T ss_pred cCEEEEecC----CHHHHHHHHHHHHhccccCCCceEEEEeCCCch
Confidence 358899998 569999999999998744468899999999987
No 67
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=94.86 E-value=0.078 Score=50.59 Aligned_cols=62 Identities=16% Similarity=0.162 Sum_probs=43.4
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHhcCCCCC---CCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCC
Q 022795 107 GIDVFICTADPTKEPTVEVMNTVLSAMALDYPP---EKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIK 179 (292)
Q Consensus 107 ~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~---~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~ 179 (292)
...|+||+||..+-=+.++..|+-.+. -.|-. =+.+|.|+|||+.|.|.+.. ..||+|+|.+
T Consensus 68 ~lsVIVpaynE~~ri~~mldeav~~le-~ry~~~~~F~~eiiVvddgs~d~T~~~a----------~k~s~K~~~d 132 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAMLDEAVDYLE-KRYLSDKSFTYEIIVVDDGSTDSTVEVA----------LKFSRKLGDD 132 (323)
T ss_pred eeEEEEecCCcccchHHHHHHHHHHHH-HHhccCCCCceeEEEeCCCCchhHHHHH----------HHHHHHcCcc
Confidence 789999999944333556666665543 33433 27899999999999554442 2789999965
No 68
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=93.90 E-value=0.14 Score=52.67 Aligned_cols=44 Identities=18% Similarity=0.150 Sum_probs=39.0
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCC
Q 022795 104 QLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDG 150 (292)
Q Consensus 104 ~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG 150 (292)
.++.+=.+||||| |..+-++.|+-|+...|||..+.-+.|..||
T Consensus 23 ~~~~~i~~v~cy~---E~~~~l~~tldsl~~~~y~~~~k~~~vi~DG 66 (527)
T PF03142_consen 23 PDKFVICLVPCYS---EGEEELRTTLDSLATTDYDDSRKLIFVICDG 66 (527)
T ss_pred CCceEEEEEcccc---CChHHHHHHHHHHHhcCCCCcccEEEEEcCc
Confidence 4567888999998 9999999999999999999987778888887
No 69
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=92.47 E-value=0.15 Score=46.30 Aligned_cols=52 Identities=19% Similarity=0.072 Sum_probs=32.8
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHH
Q 022795 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMR 160 (292)
Q Consensus 106 P~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ 160 (292)
+.-.|++|||| |-+.+-.-|.+-+-.++=-.-+.+|++.||++-|=|.+...
T Consensus 3 ~kYsvilPtYn---Ek~Nlpi~~~li~~~~~e~~~~~eiIivDD~SpDGt~~~a~ 54 (238)
T KOG2978|consen 3 IKYSVILPTYN---EKENLPIITRLIAKYMSEEGKKYEIIIVDDASPDGTQEVAK 54 (238)
T ss_pred cceeEEecccc---CCCCCeeeHHHHHhhhhhhcCceEEEEEeCCCCCccHHHHH
Confidence 34689999999 55433333333222222223378999999999997766543
No 70
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=92.08 E-value=0.22 Score=49.70 Aligned_cols=50 Identities=22% Similarity=0.201 Sum_probs=43.4
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCccc
Q 022795 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASIT 155 (292)
Q Consensus 103 ~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T 155 (292)
.++|.-+|+|+-+| |-...+.+||.|+++-.=+.=-.+|+++||++.|.+
T Consensus 121 ~dlp~TsviITfHN---EARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dpe 170 (559)
T KOG3738|consen 121 VDLPPTSVIITFHN---EARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPE 170 (559)
T ss_pred cCCCCceEEEEecc---HHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChH
Confidence 46899999999999 999999999999998764433679999999999843
No 71
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=85.20 E-value=2.6 Score=39.09 Aligned_cols=58 Identities=12% Similarity=0.282 Sum_probs=34.5
Q ss_pred EEEEecCCCCCCChHHHHHH----HHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCC
Q 022795 109 DVFICTADPTKEPTVEVMNT----VLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIK 179 (292)
Q Consensus 109 DVfI~Tynp~~Ep~~vv~~T----vls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~ 179 (292)
+|+||.++ .+...-+.++ +.++.... +...++|+|+|||+++.+.+.+ ..+|++.+..
T Consensus 1 SiIIPv~~--~~~~~~i~~~l~~~l~~l~~~~-~~~~~eiIvvd~~s~~~~~~~l----------~~~~~~~~~~ 62 (281)
T PF10111_consen 1 SIIIPVRN--RSERPDILERLRNCLESLSQFQ-SDPDFEIIVVDDGSSDEFDEEL----------KKLCEKNGFI 62 (281)
T ss_pred CEEEEecC--CccchHHHHHHHHHHHHHHhcC-CCCCEEEEEEECCCchhHHHHH----------HHHHhccCce
Confidence 48999999 3332233333 44444321 2348999999999998332222 2667776654
No 72
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=84.29 E-value=1.8 Score=39.51 Aligned_cols=32 Identities=16% Similarity=0.042 Sum_probs=26.1
Q ss_pred cCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCc
Q 022795 114 TADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGAS 153 (292)
Q Consensus 114 Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~ 153 (292)
|||| +.+.+.++|.|++... .+|+|+|||+++
T Consensus 2 tyn~---~~~~l~~~l~sl~~q~-----~~iiVVDN~S~~ 33 (281)
T TIGR01556 2 TFNP---DLEHLGELITSLPKQV-----DRIIAVDNSPHS 33 (281)
T ss_pred ccCc---cHHHHHHHHHHHHhcC-----CEEEEEECcCCC
Confidence 8984 3588999999998763 479999999865
No 73
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=74.80 E-value=5.9 Score=30.27 Aligned_cols=35 Identities=26% Similarity=0.276 Sum_probs=27.2
Q ss_pred CChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHH
Q 022795 120 EPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGM 159 (292)
Q Consensus 120 Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l 159 (292)
|. .++...|..-+++.+- ++||.|||++|-|.+.+
T Consensus 3 e~-~~L~~wl~~~~~lG~d----~i~i~d~~s~D~t~~~l 37 (97)
T PF13704_consen 3 EA-DYLPEWLAHHLALGVD----HIYIYDDGSTDGTREIL 37 (97)
T ss_pred hH-HHHHHHHHHHHHcCCC----EEEEEECCCCccHHHHH
Confidence 44 6788888888888654 69999999999664444
No 74
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=73.53 E-value=2.2 Score=44.45 Aligned_cols=50 Identities=26% Similarity=0.227 Sum_probs=43.0
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCccc
Q 022795 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASIT 155 (292)
Q Consensus 103 ~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T 155 (292)
+.+|++.|+|+-+| |...++.+||-|+++.-=|.--.+|+|+||++...-
T Consensus 139 ~~Lp~~Svii~f~n---E~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~ 188 (578)
T KOG3736|consen 139 DKLPTTSVIIIFHN---EAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDH 188 (578)
T ss_pred cccCCCceEEEEec---CCCcchhheEEeehccCChhHeEEEEEeecCcchhh
Confidence 45999999999999 999999999999998775555778999999997743
No 75
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=73.07 E-value=3.5 Score=41.58 Aligned_cols=45 Identities=24% Similarity=0.364 Sum_probs=28.9
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCC-CCcEEEEEcCCCCc
Q 022795 104 QLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPP-EKLHVYLSDDGGAS 153 (292)
Q Consensus 104 ~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~-~kl~VyVlDDG~s~ 153 (292)
..|.+-|+|=+|| .|..+.+||.++++.. |. ++..|+|+.||+..
T Consensus 91 ~~~~~pVlV~AcN----Rp~yl~r~L~sLl~~r-p~~~~fpIiVSQDg~~~ 136 (434)
T PF03071_consen 91 KEPVIPVLVFACN----RPDYLRRTLDSLLKYR-PSAEKFPIIVSQDGDDE 136 (434)
T ss_dssp ------EEEEESS-----TT-HHHHHHHHHHH--S-TTTS-EEEEE-TT-H
T ss_pred CCCcceEEEEecC----CcHHHHHHHHHHHHcC-CCCCCccEEEEecCCcH
Confidence 4678889999998 5589999999999988 65 68899999999977
No 76
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=68.82 E-value=13 Score=37.50 Aligned_cols=49 Identities=24% Similarity=0.201 Sum_probs=40.6
Q ss_pred CCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCc
Q 022795 102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGAS 153 (292)
Q Consensus 102 ~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~ 153 (292)
+.+||+++|+|--.| |-=..+++||.|++.-.=|.=--+|.++||=+..
T Consensus 151 pe~Lpt~SVviVFHN---EGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdK 199 (603)
T KOG3737|consen 151 PENLPTSSVVIVFHN---EGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDK 199 (603)
T ss_pred cccCCcceEEEEEec---CccHHHHHHHHHHHhcCcHHhhheEEEeccCCcc
Confidence 578999999999999 9999999999999866544334578888887776
No 77
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=52.26 E-value=74 Score=27.63 Aligned_cols=81 Identities=17% Similarity=0.229 Sum_probs=47.8
Q ss_pred CCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCCCCCCccceeCCCCCCCCCC
Q 022795 119 KEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSG 198 (292)
Q Consensus 119 ~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R~P~~Yf~r~~~~~~kag 198 (292)
+=--.....|++..++..|-++.+++|++|=+++++ .+|..--.+. ....
T Consensus 48 gsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l---------------~~~~~~~~~~---------------~~~~ 97 (205)
T PF01580_consen 48 GSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDL---------------APLADLPHVA---------------AVAV 97 (205)
T ss_dssp TSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCC---------------GGGTT-TTBS---------------S-S-
T ss_pred CCCccHHHHHHHHHHHHHhcCCccEEEEEcCCcccc---------------chhhhhhhhc---------------cccc
Confidence 445567778888888888877899999999776651 1222111111 0011
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 022795 199 NAEFIVEREKIKEKYTEFKERVTRAIEKWGL 229 (292)
Q Consensus 199 n~n~a~~~~~~k~~Ye~~k~ri~~~~~~~~~ 229 (292)
..+...-.+.++..+++|+.|.+...+.+..
T Consensus 98 ~~~~~~~~~~l~~l~~em~~R~~~l~~~~~~ 128 (205)
T PF01580_consen 98 ATDPEEILRLLEELVEEMERRQALLREAGVR 128 (205)
T ss_dssp B-SHHHHHHHHHHHHHHHHHHHHHHHHCT-S
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 1233445677788999999999877665553
No 78
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism]
Probab=46.10 E-value=1.1e+02 Score=30.95 Aligned_cols=68 Identities=12% Similarity=0.213 Sum_probs=45.6
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCCCCCC
Q 022795 104 QLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICP 183 (292)
Q Consensus 104 ~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R~P 183 (292)
.-|+|+.|-|+-| +++.+-.+-+.+... .-| .+.+.++|-+.++.--. +--.|++-++|-|
T Consensus 342 s~~~V~L~Y~~~n---~e~~~y~~eLr~~~q-kl~--~~~lHiiDSs~~g~l~~-------------e~ler~~~~~~~~ 402 (438)
T COG4097 342 SDPPVHLFYCSRN---WEEALYAEELRALAQ-KLP--NVVLHIIDSSKDGYLDQ-------------EDLERYPDRPRTR 402 (438)
T ss_pred cCCceEEEEEecC---CchhHHHHHHHHHHh-cCC--CeEEEEecCCCCCccCH-------------HHhhccccccCcc
Confidence 4589999999999 665666666666543 344 78888877777662111 2223446678889
Q ss_pred ccceeCC
Q 022795 184 EAYFSDP 190 (292)
Q Consensus 184 ~~Yf~r~ 190 (292)
..||..+
T Consensus 403 sv~fCGP 409 (438)
T COG4097 403 SVFFCGP 409 (438)
T ss_pred eEEEEcC
Confidence 9999654
No 79
>KOG2051 consensus Nonsense-mediated mRNA decay 2 protein [RNA processing and modification]
Probab=45.36 E-value=21 Score=39.68 Aligned_cols=54 Identities=20% Similarity=0.191 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-hcCCCCCCCCCCCCCcchhhhhccCCCcchhhhhhcCCCCceeEeeeccCCCCCCCc
Q 022795 204 VEREKIKEKYTEFKERVTRAIE-KWGLENEGISRSRDHPSVVEVIGENDNEAANEEQQMNNKMPLLVYVAREKRPSHPHN 282 (292)
Q Consensus 204 ~~~~~~k~~Ye~~k~ri~~~~~-~~~~~~~~~~~~~~h~~ivqv~~~~~~~~~d~~~~~~~~lP~lvyvsReKrp~~~H~ 282 (292)
.||..||++|.++..|||.... +++ .+. ..+.+..-+=.++-||.++|+
T Consensus 1068 eEr~~~KrltL~~~er~e~e~~~~~l-------~~~-----------------------~~r~~~~~~~~~~~r~~f~~~ 1117 (1128)
T KOG2051|consen 1068 EERKRVKRLTLNINERIEEEDYTKSL-------KKT-----------------------QSRILQGSTKVKFVRPRFEHP 1117 (1128)
T ss_pred HhHHHHHHHHhhhchhHHHHHHHHhc-------ccc-----------------------hhcccCCCCccCccCcccccc
Confidence 4699999999999999996542 222 111 112233333466889999999
Q ss_pred ccccc
Q 022795 283 FKAGA 287 (292)
Q Consensus 283 ~KAGa 287 (292)
.+||.
T Consensus 1118 ~g~~~ 1122 (1128)
T KOG2051|consen 1118 KGAGT 1122 (1128)
T ss_pred cCCCc
Confidence 99984
No 80
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=44.72 E-value=1.3e+02 Score=30.36 Aligned_cols=45 Identities=13% Similarity=0.260 Sum_probs=37.3
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCc
Q 022795 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGAS 153 (292)
Q Consensus 103 ~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~ 153 (292)
..||+|+|+-|--. -+ .-+.+-+.+-...+|| ++++..|=+...|
T Consensus 82 ~~LPgVSiikPl~G---~d-~nl~~Nlesffts~Y~--~~ElLfcv~s~eD 126 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKG---VD-PNLYHNLESFFTSQYH--KYELLFCVESSED 126 (431)
T ss_pred CCCCCceEEeeccc---CC-chhHHhHHHHHhhccC--ceEEEEEEccCCC
Confidence 36999999999874 44 3577789999999999 8999888887777
No 81
>TIGR02584 cas_NE0113 CRISPR-associated protein, NE0113 family. Members of this minor CRISPR-associated (Cas) protein family are found in cas gene clusters in Vibrio vulnificus YJ016, Nitrosomonas europaea ATCC 19718, Mannheimia succiniciproducens MBEL55E, and Verrucomicrobium spinosum.
Probab=39.93 E-value=39 Score=30.94 Aligned_cols=70 Identities=19% Similarity=0.310 Sum_probs=47.7
Q ss_pred EEEecCCCCCCChHHHHHHHHHHhcCCCC--CCCcEEEEEcCCCCcccHHHHH---HHHHHhhchHHHHHHhCCCCCCCc
Q 022795 110 VFICTADPTKEPTVEVMNTVLSAMALDYP--PEKLHVYLSDDGGASITLLGMR---EAWKFARSWLPFCKRFGIKTICPE 184 (292)
Q Consensus 110 VfI~Tynp~~Ep~~vv~~Tvls~lalDYP--~~kl~VyVlDDG~s~~T~~~l~---ea~~fa~~W~pfc~k~gv~~R~P~ 184 (292)
|+|||- +-.|.||-.|+-++.+-..| .+.+.|+=.-+|... ..++|. +++ -.+|..||+.+.-.|+.++
T Consensus 1 ILvat~---G~sPQVVTETLyaL~~~g~~~~pdEi~vItT~~g~~~-~~~~Ll~~~~~~--~g~~~~l~~dy~~~~~~~~ 74 (209)
T TIGR02584 1 ILLCVS---GMSPQIITETIYALAQESPPVVPEEIHVITTSDGKRD-IQQQLLTPDEAW--QGVLAKLRHDYFQGPRPPF 74 (209)
T ss_pred CEEEec---CCCCchHHHHHHHHHhcCCCCCCCeEEEEEccCcHHH-HHHHhccCccch--hhHHHHHHHHHhccCcccc
Confidence 578887 47779999999999999888 777776666776543 233332 111 1356789999943556555
Q ss_pred c
Q 022795 185 A 185 (292)
Q Consensus 185 ~ 185 (292)
.
T Consensus 75 ~ 75 (209)
T TIGR02584 75 D 75 (209)
T ss_pred C
Confidence 5
No 82
>PF09623 Cas_NE0113: CRISPR-associated protein NE0113 (Cas_NE0113); InterPro: IPR019092 Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) are a family of DNA direct repeats separated by regularly sized non-repetitive spacer sequences that are found in most bacterial and archaeal genomes []. CRISPRs appear to provide acquired resistance against bacteriophages, possibly acting with an RNA interference-like mechanism to inhibit gene functions of invasive DNA elements [, ]. Differences in the number and type of spacers between CRISPR repeats correlate with phage sensitivity. It is thought that following phage infection, bacteria integrate new spacers derived from phage genomic sequences, and that the removal or addition of particular spacers modifies the phage-resistance phenotype of the cell. Therefore, the specificity of CRISPRs may be determined by spacer-phage sequence similarity. In addition, there are many protein families known as CRISPR-associated sequences (Cas), which are encoded in the vicinity of CRISPR loci []. CRISPR/cas gene regions can be quite large, with up to 20 different, tandem-arranged cas genes next to a CRISPR cluster or filling the region between two repeat clusters. Cas genes and CRISPRs are found on mobile genetic elements such as plasmids, and have undergone extensive horizontal transfer. Cas proteins are thought to be involved in the propagation and functioning of CRISPRs. Some Cas proteins show similarity to helicases and repair proteins, although the functions of most are unknown. Cas families can be divided into subtypes according to operon organisation and phylogeny. This entry represents a Cas protein family found in both bacteria and arachaea. The function of these proteins is unknown.
Probab=39.70 E-value=2.3e+02 Score=26.17 Aligned_cols=61 Identities=16% Similarity=0.308 Sum_probs=42.5
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCC
Q 022795 109 DVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGI 178 (292)
Q Consensus 109 DVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv 178 (292)
.|+|||- |..|.+|-.|+-++.+-.++.+.+.|+=-.||.......-+ ...+..||+.|+.
T Consensus 3 ~iLlatl---G~sPqVVTETL~aL~~~g~~p~EV~vitT~~~~~~~~~~ll------~g~~~~l~~~y~~ 63 (224)
T PF09623_consen 3 NILLATL---GTSPQVVTETLYALAQQGEIPDEVHVITTRDGAVRAALRLL------DGGLQRLCQDYYL 63 (224)
T ss_pred eEEEEec---CCCchHHHHHHHHHHcCCCCCCEEEEEECCChHHHHHHHHH------HHHHHHHHHhhcC
Confidence 3788998 58889999999999999988776666655555443222222 1125589999976
No 83
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=39.03 E-value=11 Score=34.75 Aligned_cols=23 Identities=22% Similarity=0.284 Sum_probs=19.8
Q ss_pred CceeEeeeccCCCCCCCcccccccccc
Q 022795 265 MPLLVYVAREKRPSHPHNFKAGALNVL 291 (292)
Q Consensus 265 lP~lvyvsReKrp~~~H~~KAGamN~l 291 (292)
.++++|+.|++++| +|||++|..
T Consensus 66 ~~~v~~~~r~~~~g----~Kag~l~~~ 88 (254)
T cd04191 66 QGRIYYRRRRENTG----RKAGNIADF 88 (254)
T ss_pred CCcEEEEEcCCCCC----ccHHHHHHH
Confidence 67899999999874 699999964
No 84
>PF14979 TMEM52: Transmembrane 52
Probab=38.71 E-value=1.3e+02 Score=26.33 Aligned_cols=77 Identities=21% Similarity=0.304 Sum_probs=44.8
Q ss_pred CcchhH-HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCC
Q 022795 58 RAAPLL-PWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALD 136 (292)
Q Consensus 58 ~~~~~~-~wl~l~~aE~~~~~~~ll~~~~~~~pv~r~~~~~~l~~~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalD 136 (292)
.|..+| .|+++++ =+.+.+.++.....++.-.+|....+.. .+...+.-|+=|=..| -+ .-+-.||.|.-+..
T Consensus 15 ~W~~LWyIwLill~-~~llLLCG~ta~C~rfCClrk~~~~q~~-~~~~~~P~~~TVia~D---~D-St~hsTvTS~sSVq 88 (154)
T PF14979_consen 15 RWSSLWYIWLILLI-GFLLLLCGLTASCVRFCCLRKQAHTQTH-EPPAPQPYEVTVIAVD---SD-STLHSTVTSYSSVQ 88 (154)
T ss_pred ceehhhHHHHHHHH-HHHHHHHHHHHHHHHHHHhccccccCCC-CCCCCCCceEEEEecc---CC-ccccchhhhhhccc
Confidence 455566 4654443 3333445555555554333333211111 1344677788888886 22 57899999999999
Q ss_pred CCCC
Q 022795 137 YPPE 140 (292)
Q Consensus 137 YP~~ 140 (292)
||..
T Consensus 89 ~P~~ 92 (154)
T PF14979_consen 89 YPAG 92 (154)
T ss_pred cccc
Confidence 9974
No 85
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=35.63 E-value=96 Score=29.47 Aligned_cols=54 Identities=11% Similarity=0.094 Sum_probs=40.3
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCC--cccHHHHHH
Q 022795 104 QLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGA--SITLLGMRE 161 (292)
Q Consensus 104 ~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s--~~T~~~l~e 161 (292)
+-++|=|+.|--| +++ .+..=+..+.+++||++.+++-++-.-++ +.|.+.+.+
T Consensus 23 ~~e~VLILtplrn--a~~--~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~ 78 (269)
T PF03452_consen 23 NKESVLILTPLRN--AAS--FLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEA 78 (269)
T ss_pred cCCeEEEEEecCC--chH--HHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHH
Confidence 4588999999987 444 68888999999999999888855544444 555555554
No 86
>PF11712 Vma12: Endoplasmic reticulum-based factor for assembly of V-ATPase; InterPro: IPR021013 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. The yeast vacuolar proton-translocating ATPase (V-ATPase) is the best characterised member of the V-ATPase family. A total of thirteen genes are required for encoding the subunits of the enzyme complex itself and an additional three for providing factors necessary for the assembly of the whole. Vma12 is one of these latter, all three of which are localised to the endoplasmic reticulum [].
Probab=35.24 E-value=71 Score=26.89 Aligned_cols=19 Identities=37% Similarity=0.544 Sum_probs=12.7
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 022795 61 PLLPWLLVFAAELLLSFQW 79 (292)
Q Consensus 61 ~~~~wl~l~~aE~~~~~~~ 79 (292)
++++.++.+++|+++....
T Consensus 116 gl~~al~vlvAEv~l~~~y 134 (142)
T PF11712_consen 116 GLFGALLVLVAEVVLYIRY 134 (142)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3455666778898876553
No 87
>PLN02893 Cellulose synthase-like protein
Probab=30.03 E-value=32 Score=37.05 Aligned_cols=23 Identities=13% Similarity=0.196 Sum_probs=19.2
Q ss_pred ceeCCCC----CCCCCChhhhHHHHHH
Q 022795 186 YFSDPEN----GDGDSGNAEFIVEREK 208 (292)
Q Consensus 186 Yf~r~~~----~~~kagn~n~a~~~~~ 208 (292)
|.+|+.+ .|+||||+|++..-.+
T Consensus 268 YvsReKrp~~~Hh~KAGaLN~llrvS~ 294 (734)
T PLN02893 268 YVSREKSKNSPHHFKAGALNTLLRVSA 294 (734)
T ss_pred EEeCCCCCCCCcccccchHHHHHHhhc
Confidence 9999976 5999999998887543
No 88
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=29.64 E-value=94 Score=31.40 Aligned_cols=148 Identities=20% Similarity=0.262 Sum_probs=78.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhc------------ccCCCCCcchhHHHH-HHHHHHHHHHHHHHHHHHHhhcccCCC
Q 022795 27 IINRSLVLLHFTSLAFLVYYRVSYF------------FQVSNARAAPLLPWL-LVFAAELLLSFQWLLGIAYRWRPISRT 93 (292)
Q Consensus 27 ~~~R~~~~~~~~~l~~yl~wR~~~t------------l~~~~~~~~~~~~wl-~l~~aE~~~~~~~ll~~~~~~~pv~r~ 93 (292)
.+|+++..+.+.....|++||...- +..+.........|+ ..-+.|+..+...+ ..+
T Consensus 3 ~lY~~l~~~~~p~~~~~l~~R~~~~~~y~~r~~eRfg~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv-~~l--------- 72 (419)
T COG1519 3 FLYRLLLTLALPFIAPRLLYRSFKGPKYRKRLGERFGFYKPPVKPEGPLVWIHAASVGEVLAALPLV-RAL--------- 72 (419)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHhcccCCCCCCCCCeEEEEecchhHHHHHHHHH-HHH---------
Confidence 4799999988888889999988731 000000001112333 22355665443321 111
Q ss_pred CCCCCCCCCCCCCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHH--
Q 022795 94 VFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLP-- 171 (292)
Q Consensus 94 ~~~~~l~~~~~lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~p-- 171 (292)
....|.+.|+|+|+-|++=+ ..+--|+..-.+.|+-=|-.- -+++|=+.|+|
T Consensus 73 --------~~~~P~~~ilvTt~T~Tg~e----------~a~~~~~~~v~h~YlP~D~~~--------~v~rFl~~~~P~l 126 (419)
T COG1519 73 --------RERFPDLRILVTTMTPTGAE----------RAAALFGDSVIHQYLPLDLPI--------AVRRFLRKWRPKL 126 (419)
T ss_pred --------HHhCCCCCEEEEecCccHHH----------HHHHHcCCCeEEEecCcCchH--------HHHHHHHhcCCCE
Confidence 12357888999998654333 223334543455555443221 34556555554
Q ss_pred --------------HHHHhCCCCCCCccceeCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHH
Q 022795 172 --------------FCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVT 221 (292)
Q Consensus 172 --------------fc~k~gv~~R~P~~Yf~r~~~~~~kagn~n~a~~~~~~k~~Ye~~k~ri~ 221 (292)
-|++.||. -+=-...-. -.-...|...|..++.+-.+|.
T Consensus 127 ~Ii~EtElWPnli~e~~~~~~p------~~LvNaRLS-----~rS~~~y~k~~~~~~~~~~~i~ 179 (419)
T COG1519 127 LIIMETELWPNLINELKRRGIP------LVLVNARLS-----DRSFARYAKLKFLARLLFKNID 179 (419)
T ss_pred EEEEeccccHHHHHHHHHcCCC------EEEEeeeec-----hhhhHHHHHHHHHHHHHHHhcc
Confidence 67888877 332111100 1123457777778887777776
No 89
>PRK11509 hydrogenase-1 operon protein HyaE; Provisional
Probab=27.87 E-value=1.3e+02 Score=25.52 Aligned_cols=67 Identities=18% Similarity=0.316 Sum_probs=45.2
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCCCCCCcc
Q 022795 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEA 185 (292)
Q Consensus 106 P~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R~P~~ 185 (292)
++.-|+..+-||..-|-..=.--|+--++-.|+..++.|+.+|.-..+ .++++|||. .-|.-
T Consensus 34 ~~~~vl~~~gdp~r~~E~~D~avvleELa~e~~~~~v~~akVDiD~~~-----------------~LA~~fgV~-siPTL 95 (132)
T PRK11509 34 APDGVVLLSSDPKRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQSE-----------------AIGDRFGVF-RFPAT 95 (132)
T ss_pred CCcEEEEeCCCCCcCCccccHHHHHHHHHHHhcCCceEEEEEECCCCH-----------------HHHHHcCCc-cCCEE
Confidence 445666666666654433334456667777888667999999986665 788999998 45555
Q ss_pred ceeCC
Q 022795 186 YFSDP 190 (292)
Q Consensus 186 Yf~r~ 190 (292)
-|-+.
T Consensus 96 l~Fkd 100 (132)
T PRK11509 96 LVFTG 100 (132)
T ss_pred EEEEC
Confidence 45444
No 90
>PF00809 Pterin_bind: Pterin binding enzyme This Prosite entry is a subset of the Pfam family; InterPro: IPR000489 The ~250-residue pterin-binding domain has been shown to adopt a (beta/alpha)8 barrel fold, which has the overall shape of a distorted cylinder. It has eight alpha-helices stacked around the outside of an inner cylinder of parallel beta-strands. The pterin ring binds at the bottom of the (beta/alpha;)8 barrel in a polar cup-like region that is relatively solvent exposed and fairly negatively charged. The pterin ring is partially buried within the (beta/alpha)8 barrel. The pterin binding residues are highly conserved and include aspartate and asparagine residues located at the C terminus of the beta-strands of the barrel, which are predicted to form hydrogen bonds with the nitrogen and oxygen atoms of the pterin ring [, , ]. Some proteins known to contain a pterin-binding domain are listed below: Prokaryotic and eukaryotic B12-dependent methionine synthase (MetH) (2.1.1.13 from EC), a large, modular protein that catalyzes the transfer of a methyl group from methyltetrahydrofolate (CH3-H4folate) to Hcy to form methionine, using cobalamin as an intermediate methyl carrier. Prokaryotic and eukaryotic dihydropteroate synthase (DHPS) (2.5.1.15 from EC). It catalyzes the condensation of para-aminobenzoic acid (pABA) with 7,8- dihydropterin-pyrophosphate (DHPPP), eliminating pyrophosphate to form 7,8- dihydropteroate which is subsequently converted to tetrahydrofolate. Moorella thermoacetica 5-methyltetrahydrofolate corrinoid/iron sulphur protein methyltransferase (MeTr). It transfers the N5-methyl group from CH3-H4folate to a cob(I)amide centre in another protein, the corrinoid iron sulphur protein. ; GO: 0042558 pteridine-containing compound metabolic process; PDB: 2VP8_B 2BMB_A 2Y5S_B 2Y5J_A 3BOF_B 1Q7Q_B 1Q85_B 1Q7Z_A 1Q7M_A 1Q8A_B ....
Probab=27.45 E-value=3e+02 Score=24.55 Aligned_cols=90 Identities=14% Similarity=0.114 Sum_probs=55.4
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCC-CcccHHHHHHHHHHhhchHHHHHHhCCCCCCCcc
Q 022795 107 GIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGG-ASITLLGMREAWKFARSWLPFCKRFGIKTICPEA 185 (292)
Q Consensus 107 ~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~-s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R~P~~ 185 (292)
.+=|-|=|+| +++++..+.. . ..+ +.|.++ +. .+ .-.++|+++|+.
T Consensus 72 ~~plSIDT~~-----~~v~~~aL~~--g-------~~~-ind~~~~~~--~~----------~~~~l~a~~~~~------ 118 (210)
T PF00809_consen 72 DVPLSIDTFN-----PEVAEAALKA--G-------ADI-INDISGFED--DP----------EMLPLAAEYGAP------ 118 (210)
T ss_dssp TSEEEEEESS-----HHHHHHHHHH--T-------SSE-EEETTTTSS--ST----------THHHHHHHHTSE------
T ss_pred CeEEEEECCC-----HHHHHHHHHc--C-------cce-EEecccccc--cc----------hhhhhhhcCCCE------
Confidence 4556688997 5777775543 1 123 444444 42 11 123899999998
Q ss_pred ceeCCCCCCCCCChhhhHHHH-HHHHHHHHHHHHHHHHHhhhcCCC
Q 022795 186 YFSDPENGDGDSGNAEFIVER-EKIKEKYTEFKERVTRAIEKWGLE 230 (292)
Q Consensus 186 Yf~r~~~~~~kagn~n~a~~~-~~~k~~Ye~~k~ri~~~~~~~~~~ 230 (292)
|+--... +...|-...+.++ ..+++.++.|..||+.+.+.|...
T Consensus 119 vV~m~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~l~~~Gi~~ 163 (210)
T PF00809_consen 119 VVLMHSD-GNPKGMPETADYRLDIAEEIIEFLEERIEALEKAGIPR 163 (210)
T ss_dssp EEEESES-SETTTTTSSHHHSHSHHHHHHHHHHHHHHHHHHTT--G
T ss_pred EEEEecc-cccccccccchhhhhHHHHHHHHHHHHHHHHHHcCCCH
Confidence 8776543 1112223335566 778889999999999988877643
No 91
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=27.32 E-value=1.6e+02 Score=27.01 Aligned_cols=57 Identities=11% Similarity=0.068 Sum_probs=35.1
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCC
Q 022795 109 DVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIK 179 (292)
Q Consensus 109 DVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~ 179 (292)
-||+.+.+ ..-...+.-++.|++.=. ...+++||++||-++...+ ....+|+++|++
T Consensus 2 ni~~~~~~--~~y~~~~~v~l~Sll~nn--~~~~~fyil~~~is~e~~~----------~l~~~~~~~~~~ 58 (248)
T cd06432 2 NIFSVASG--HLYERFLRIMMLSVMKNT--KSPVKFWFIKNFLSPQFKE----------FLPEMAKEYGFE 58 (248)
T ss_pred eEEEEcCc--HHHHHHHHHHHHHHHHcC--CCCEEEEEEeCCCCHHHHH----------HHHHHHHHhCCc
Confidence 35655553 122234677777776543 2479999999998872222 223678888775
No 92
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=26.89 E-value=1.4e+02 Score=26.37 Aligned_cols=40 Identities=23% Similarity=0.287 Sum_probs=30.2
Q ss_pred CCCCCCChHHHHHHHHHHhc-----------CCCCC---CCcEEEEEcCCCCcccHH
Q 022795 115 ADPTKEPTVEVMNTVLSAMA-----------LDYPP---EKLHVYLSDDGGASITLL 157 (292)
Q Consensus 115 ynp~~Ep~~vv~~Tvls~la-----------lDYP~---~kl~VyVlDDG~s~~T~~ 157 (292)
|| |+...+.+|+.+++. -.+.. .|+-|-|+-||...+.-.
T Consensus 2 YN---Ed~~ll~rTL~gv~~Ni~~l~~r~~s~~wG~d~WkkiVVcIv~DGr~ki~~~ 55 (163)
T PF01644_consen 2 YN---EDEILLARTLHGVMKNIAHLCSRKRSKTWGKDAWKKIVVCIVSDGRAKINPR 55 (163)
T ss_pred CC---CCHHHHHHHHHHHHHHHHHHHhCCcCCcCCCCCCcEEEEEEEecCcccCCHH
Confidence 77 999999999999765 12222 388999999999875433
No 93
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=25.20 E-value=1.7e+02 Score=27.62 Aligned_cols=28 Identities=18% Similarity=0.158 Sum_probs=21.6
Q ss_pred CChHHHHHHHHHHhcCCCCCCCcEEEEEcC
Q 022795 120 EPTVEVMNTVLSAMALDYPPEKLHVYLSDD 149 (292)
Q Consensus 120 Ep~~vv~~Tvls~lalDYP~~kl~VyVlDD 149 (292)
-+++.+.+.|-.+..+.+= .|+.++.||
T Consensus 13 ~~~~~lk~~id~ma~~K~N--~lhlHl~D~ 40 (303)
T cd02742 13 LSVESIKRTIDVLARYKIN--TFHWHLTDD 40 (303)
T ss_pred cCHHHHHHHHHHHHHhCCc--EEEEeeecC
Confidence 3567788887777766655 899999998
No 94
>PF04844 Ovate: Transcriptional repressor, ovate; InterPro: IPR006458 This group of sequences contain an uncharacterised domain of about 70 residues found exclusively in plants, generally toward the C terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana (Mouse-ear cress). Other regions of these proteins tend to consist largely of low-complexity sequence. Function is not known.
Probab=25.14 E-value=42 Score=24.73 Aligned_cols=38 Identities=18% Similarity=0.292 Sum_probs=24.8
Q ss_pred HHHHHHHHHHH-HHhhhcCCCCC----------CCCCCCCCcchhhhhc
Q 022795 211 EKYTEFKERVT-RAIEKWGLENE----------GISRSRDHPSVVEVIG 248 (292)
Q Consensus 211 ~~Ye~~k~ri~-~~~~~~~~~~~----------~~~~~~~h~~ivqv~~ 248 (292)
.+|+||+.=+. +..++|...|. +-+.+..|+-|++++.
T Consensus 3 DP~~DFr~SM~EMI~~~~i~~~~~LeeLL~cYL~LN~~~~H~~Iv~aF~ 51 (59)
T PF04844_consen 3 DPYEDFRESMVEMIEENGIRDWDDLEELLACYLSLNSPEHHKFIVEAFV 51 (59)
T ss_pred CHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCChhhhhHHHHHHH
Confidence 36778876665 34555555554 2256778999999764
No 95
>PLN02189 cellulose synthase
Probab=24.70 E-value=1.5e+02 Score=33.27 Aligned_cols=26 Identities=12% Similarity=0.250 Sum_probs=19.3
Q ss_pred ccceeCCC----CCCCCCChhhhHHHHHHH
Q 022795 184 EAYFSDPE----NGDGDSGNAEFIVEREKI 209 (292)
Q Consensus 184 ~~Yf~r~~----~~~~kagn~n~a~~~~~~ 209 (292)
-.|++|+. ++|+|||++|.+..=.++
T Consensus 500 LVYVSREKrPg~~Hh~KAGAMNaLlRVSav 529 (1040)
T PLN02189 500 LVYVSREKRPGFQHHKKAGAMNALIRVSAV 529 (1040)
T ss_pred eEEEeccCCCCCCcccchhhHHHHHHHhhh
Confidence 35999984 368899999987754443
No 96
>PF04971 Lysis_S: Lysis protein S ; InterPro: IPR007054 The lysis S protein is a cytotoxic protein forming holes in membranes causing cell lysis. The action of Lysis S is independent of the proportion of acidic phospholipids in the membrane [].
Probab=24.40 E-value=1.5e+02 Score=22.50 Aligned_cols=49 Identities=10% Similarity=0.049 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 022795 38 TSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISR 92 (292)
Q Consensus 38 ~~l~~yl~wR~~~tl~~~~~~~~~~~~wl~l~~aE~~~~~~~ll~~~~~~~pv~r 92 (292)
...+.|+..++...+.+ .-|.++.++..=++..+.++.+..++.+.-+|
T Consensus 14 ag~~~~wl~~lld~~sp------~qW~aIGvi~gi~~~~lt~ltN~YFK~k~drr 62 (68)
T PF04971_consen 14 AGSAGYWLLQLLDQFSP------SQWAAIGVIGGIFFGLLTYLTNLYFKIKEDRR 62 (68)
T ss_pred hhhHHHHHHHHHhccCc------ccchhHHHHHHHHHHHHHHHhHhhhhhhHhhh
Confidence 34567888888776543 24666665655556666777777777665444
No 97
>PRK13964 coaD phosphopantetheine adenylyltransferase; Provisional
Probab=22.36 E-value=2.1e+02 Score=24.27 Aligned_cols=58 Identities=10% Similarity=0.253 Sum_probs=32.6
Q ss_pred EEEecCCCCCCC--hHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCCCCCCccce
Q 022795 110 VFICTADPTKEP--TVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYF 187 (292)
Q Consensus 110 VfI~Tynp~~Ep--~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R~P~~Yf 187 (292)
+++++.||.|.+ +.--+-.++...--++| +++|....||= .+.||++.|+. |.
T Consensus 32 ~v~v~~np~K~~~~s~e~R~~~l~~~~~~~~--~v~v~~~~~~l-----------------~v~~~~~~~a~------~i 86 (140)
T PRK13964 32 YVVVSINPDKSNASDLDSRFKNVKNKLKDFK--NVEVLINENKL-----------------TAEIAKKLGAN------FL 86 (140)
T ss_pred EEEeccCCCCCCCCCHHHHHHHHHHHHcCCC--CcEEecCcCCc-----------------HHHHHHHCCCe------EE
Confidence 455667776653 11122222222223666 55665433442 24899999999 99
Q ss_pred eCCCC
Q 022795 188 SDPEN 192 (292)
Q Consensus 188 ~r~~~ 192 (292)
-|.-+
T Consensus 87 vrGlR 91 (140)
T PRK13964 87 IRSAR 91 (140)
T ss_pred EEecC
Confidence 88754
No 98
>KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism]
Probab=22.13 E-value=2.1e+02 Score=28.67 Aligned_cols=44 Identities=20% Similarity=0.282 Sum_probs=37.6
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHhcCCCCC-CCcEEEEEcCCCCc
Q 022795 105 LPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPP-EKLHVYLSDDGGAS 153 (292)
Q Consensus 105 lP~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~-~kl~VyVlDDG~s~ 153 (292)
.|-+-|+|=+|| -++-|++++-.++.+. |. ++.-++|+-||+..
T Consensus 66 ~~v~pvvVf~cs----R~~~lr~~v~kll~yr-PsaekfpiiVSQD~~~e 110 (411)
T KOG1413|consen 66 PPVIPVVVFACS----RADALRRHVKKLLEYR-PSAEKFPIIVSQDCEKE 110 (411)
T ss_pred CCceeEEEEecC----cHHHHHHHHHHHHHhC-cchhhcCEEEeccCCcH
Confidence 456677777886 5699999999999999 76 79999999999986
No 99
>KOG4518 consensus Hydroxypyruvate isomerase [Carbohydrate transport and metabolism]
Probab=21.72 E-value=1.3e+02 Score=27.84 Aligned_cols=63 Identities=19% Similarity=0.241 Sum_probs=34.2
Q ss_pred CceEEEEecCCCCCCChHHHHHH-----HHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhch---HHHHHHhC
Q 022795 106 PGIDVFICTADPTKEPTVEVMNT-----VLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSW---LPFCKRFG 177 (292)
Q Consensus 106 P~VDVfI~Tynp~~Ep~~vv~~T-----vls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W---~pfc~k~g 177 (292)
-.|.|=|| +.||.+.+... +.+.+..-.|.+ -|||..-+|---=++ ++|++.. +.|+|.+|
T Consensus 31 ~~vev~~p----~~e~a~~~~~~~~~~~~~~~~~~a~~~~------~d~~~~G~~svpg~~-k~FR~~Ld~ai~yAkalg 99 (264)
T KOG4518|consen 31 KLVEVSIP----YTEPAEKLREAADEYHLKHTLINAPPGN------WDDGFRGLASVPGAK-KEFRKSLDTAIEYAKALG 99 (264)
T ss_pred eEEEecCC----CCChHHHHHHhhhcchhhhhhccCCCCC------hhhhccCcccCCchH-HHHHHHHHHHHHHHHHhC
Confidence 34655554 45898777653 344555555543 355554433111112 2355544 37999999
Q ss_pred CC
Q 022795 178 IK 179 (292)
Q Consensus 178 v~ 179 (292)
+.
T Consensus 100 C~ 101 (264)
T KOG4518|consen 100 CC 101 (264)
T ss_pred Cc
Confidence 87
No 100
>COG4226 HicB Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=20.95 E-value=66 Score=26.66 Aligned_cols=42 Identities=19% Similarity=0.255 Sum_probs=24.3
Q ss_pred EEEEcCCCCccc--HHHHHHHHHHh-hchHHHHHHhCCCCCCCcc
Q 022795 144 VYLSDDGGASIT--LLGMREAWKFA-RSWLPFCKRFGIKTICPEA 185 (292)
Q Consensus 144 VyVlDDG~s~~T--~~~l~ea~~fa-~~W~pfc~k~gv~~R~P~~ 185 (292)
+..+-||.+... ...+..+-+.+ +....+|++-|++||.|.+
T Consensus 26 ~~g~~~~~~f~~~sv~~lk~~~~~s~~~yle~C~~~g~EP~k~~S 70 (111)
T COG4226 26 FVGLSGVIDFQGDSVKGLKKEGELSLDDYLEFCKERGIEPRKPYS 70 (111)
T ss_pred ccccccccCchhhhHHHHHHHHHhhHHHHHHHHHHcCCCCccccC
Confidence 444667766532 22232221111 1245899999999998876
No 101
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=20.79 E-value=2.3e+02 Score=27.12 Aligned_cols=50 Identities=22% Similarity=0.337 Sum_probs=35.8
Q ss_pred ChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCC------------------cccHHHHHHHHHHhhchHHHHHHhCCC
Q 022795 121 PTVEVMNTVLSAMALDYPPEKLHVYLSDDGGA------------------SITLLGMREAWKFARSWLPFCKRFGIK 179 (292)
Q Consensus 121 p~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s------------------~~T~~~l~ea~~fa~~W~pfc~k~gv~ 179 (292)
|++.+.+.|-.+..+.+= .|+.++.||-+= -.|-+.++| .+.+|+++||+
T Consensus 16 ~~~~ik~~Id~ma~~KlN--~lh~HltDd~~~rle~~~~P~lt~~g~~~~~yT~~di~e-------lv~yA~~rgI~ 83 (311)
T cd06570 16 PVAVIKRQLDAMASVKLN--VFHWHLTDDQGFRIESKKYPKLQQKASDGLYYTQEQIRE-------VVAYARDRGIR 83 (311)
T ss_pred CHHHHHHHHHHHHHhCCe--EEEEEEecCCCceeecCCCccccccCCCCCccCHHHHHH-------HHHHHHHcCCE
Confidence 567888888777777765 799999999322 244455555 45888888885
No 102
>PF08844 DUF1815: Domain of unknown function (DUF1815); InterPro: IPR014943 This entry is about 100 amino acids in length and is functionally uncharacterised.
Probab=20.48 E-value=80 Score=25.63 Aligned_cols=17 Identities=24% Similarity=0.358 Sum_probs=13.4
Q ss_pred cCCCCCCCcEEEEEcCCCCc
Q 022795 134 ALDYPPEKLHVYLSDDGGAS 153 (292)
Q Consensus 134 alDYP~~kl~VyVlDDG~s~ 153 (292)
+--|++ +||.||||+..
T Consensus 28 ~rG~~A---sCYtC~dG~~~ 44 (105)
T PF08844_consen 28 RRGYLA---SCYTCGDGRDM 44 (105)
T ss_pred hCCcee---EEEecCCCCCC
Confidence 345884 89999999876
No 103
>PF11215 DUF3010: Protein of unknown function (DUF3010); InterPro: IPR021378 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=20.46 E-value=1.5e+02 Score=25.44 Aligned_cols=55 Identities=18% Similarity=0.294 Sum_probs=37.2
Q ss_pred CCCCCC-CcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCCCCCCccceeCCCCCCCCCChh
Q 022795 135 LDYPPE-KLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNA 200 (292)
Q Consensus 135 lDYP~~-kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R~P~~Yf~r~~~~~~kagn~ 200 (292)
.+.|.- .-.+-+.||-++. +.++|......||+.|+|+ ...+.+-...|..||..
T Consensus 25 ~~~pdcr~~k~~l~~~~~~~-------~vr~Fq~~f~kl~~dy~Vd----~VvIk~R~~KGKfAGga 80 (138)
T PF11215_consen 25 FQLPDCRVRKFSLSDDNSTE-------EVRKFQFTFAKLMEDYKVD----KVVIKERATKGKFAGGA 80 (138)
T ss_pred eECCccceeEEEcCCCccHH-------HHHHHHHHHHHHHHHcCCC----EEEEEecccCCCccCCc
Confidence 345553 3456666776666 7888988888999999999 44454434456667654
No 104
>PF15632 ATPgrasp_Ter: ATP-grasp in the biosynthetic pathway with Ter operon
Probab=20.25 E-value=4.1e+02 Score=25.84 Aligned_cols=62 Identities=23% Similarity=0.220 Sum_probs=38.1
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHhCCCCCCCccc
Q 022795 107 GIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAY 186 (292)
Q Consensus 107 ~VDVfI~Tynp~~Ep~~vv~~Tvls~lalDYP~~kl~VyVlDDG~s~~T~~~l~ea~~fa~~W~pfc~k~gv~~R~P~~Y 186 (292)
.||||+|.++ .+.+..---...++ -.++.+ +++..|++.+..-.+|. .+|++.|+. .|..+
T Consensus 66 ~Idv~~P~~~-----~~~l~~~r~~F~a~-----Gv~l~~---~~~~~~l~~~~dK~~~y----~~~~~~~ip--vp~~~ 126 (329)
T PF15632_consen 66 GIDVFVPGRN-----RELLAAHRDEFEAL-----GVKLLT---ASSAETLELADDKAAFY----EFMEANGIP--VPPYW 126 (329)
T ss_pred CCeEEEcCcc-----HHHHHHHHHHHHHh-----CCEEEe---cCCHHHHHHHhhHHHHH----HHHHhCCCC--CCCEE
Confidence 5999999997 23343333333322 344444 44466777777766666 789999983 45444
Q ss_pred e
Q 022795 187 F 187 (292)
Q Consensus 187 f 187 (292)
.
T Consensus 127 ~ 127 (329)
T PF15632_consen 127 R 127 (329)
T ss_pred E
Confidence 4
No 105
>PRK14126 cell division protein ZapA; Provisional
Probab=20.23 E-value=1.3e+02 Score=23.38 Aligned_cols=23 Identities=35% Similarity=0.531 Sum_probs=21.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHH
Q 022795 199 NAEFIVEREKIKEKYTEFKERVT 221 (292)
Q Consensus 199 n~n~a~~~~~~k~~Ye~~k~ri~ 221 (292)
.+|.|.|...++++|++|+..|+
T Consensus 60 ALNia~El~k~~~~~~~l~~~~~ 82 (85)
T PRK14126 60 AVNVIHDYIKLKEEYEKLKESMT 82 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999998886
Done!