Query 022796
Match_columns 292
No_of_seqs 132 out of 1296
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 06:11:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022796.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022796hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 1.8E-47 4E-52 339.5 31.6 259 28-289 61-339 (365)
2 COG0631 PTC1 Serine/threonine 100.0 4.4E-45 9.6E-50 312.9 22.6 243 28-283 4-255 (262)
3 PTZ00224 protein phosphatase 2 100.0 4.1E-42 9E-47 306.2 30.7 244 27-284 17-275 (381)
4 cd00143 PP2Cc Serine/threonine 100.0 1.9E-39 4.1E-44 278.2 28.6 243 33-279 2-254 (254)
5 PRK14559 putative protein seri 100.0 4.9E-40 1.1E-44 308.1 25.1 246 30-286 373-641 (645)
6 smart00332 PP2Cc Serine/threon 100.0 8.1E-39 1.8E-43 274.7 28.3 243 30-277 4-255 (255)
7 KOG0697 Protein phosphatase 1B 100.0 3.7E-39 8.1E-44 264.1 22.8 266 14-286 8-297 (379)
8 PF00481 PP2C: Protein phospha 100.0 1.7E-40 3.6E-45 285.1 14.5 238 33-272 1-254 (254)
9 KOG0698 Serine/threonine prote 100.0 2.7E-37 5.7E-42 273.3 29.5 255 31-286 38-310 (330)
10 KOG0699 Serine/threonine prote 100.0 1.4E-28 3.1E-33 208.7 19.2 163 124-289 330-511 (542)
11 KOG0700 Protein phosphatase 2C 100.0 7.1E-28 1.5E-32 209.0 20.2 220 45-266 84-377 (390)
12 KOG1379 Serine/threonine prote 99.9 3.8E-24 8.3E-29 179.9 19.8 205 43-279 88-330 (330)
13 KOG1323 Serine/threonine phosp 99.9 8.4E-22 1.8E-26 166.1 18.8 221 60-282 142-489 (493)
14 PF13672 PP2C_2: Protein phosp 99.9 1.7E-21 3.7E-26 162.8 16.0 177 37-249 3-194 (212)
15 KOG0618 Serine/threonine phosp 99.8 3E-20 6.4E-25 175.4 15.5 246 31-283 521-775 (1081)
16 smart00331 PP2C_SIG Sigma fact 99.8 3.2E-18 7E-23 140.9 20.2 184 32-264 4-192 (193)
17 TIGR02865 spore_II_E stage II 99.8 3.3E-17 7.2E-22 159.1 19.6 201 30-279 550-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.6 1E-13 2.2E-18 113.9 18.4 175 61-280 3-193 (193)
19 COG2208 RsbU Serine phosphatas 98.7 3.9E-06 8.4E-11 76.0 21.3 199 31-280 148-366 (367)
20 PRK10693 response regulator of 88.0 7.5 0.00016 34.1 10.7 106 44-156 148-259 (303)
21 PF09436 DUF2016: Domain of un 61.8 5.2 0.00011 26.9 1.4 22 219-240 23-44 (72)
22 COG2168 DsrH Uncharacterized c 50.0 11 0.00025 26.8 1.6 50 221-273 23-72 (96)
23 COG3315 O-Methyltransferase in 38.9 48 0.001 29.1 4.2 96 138-248 96-194 (297)
24 COG3700 AphA Acid phosphatase 30.3 1E+02 0.0022 25.0 4.3 45 223-267 71-130 (237)
25 cd06409 PB1_MUG70 The MUG70 pr 26.5 69 0.0015 22.4 2.5 21 212-232 42-62 (86)
26 TIGR03735 PRTRC_A PRTRC system 22.6 2.6E+02 0.0057 22.8 5.5 59 219-278 22-101 (192)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=1.8e-47 Score=339.47 Aligned_cols=259 Identities=37% Similarity=0.583 Sum_probs=216.9
Q ss_pred CCCceEEEEEeCCCCCCCCCccEEeeecCC--------CCceEEEEEEecCCChHHHHHHHHHHHHHHHHhCCCCchhHH
Q 022796 28 QNGKFSYGYASSPGKRSSMEDFYETRIDGV--------EGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTK 99 (292)
Q Consensus 28 ~~~~~~~~~~s~~G~r~~neDa~~~~~~~~--------~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~ 99 (292)
-...++++.+|++|.|+.|||++++..+.. ......+|+|||||||+.+|++|++.+.+.|.+.......+.
T Consensus 61 ~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~ 140 (365)
T PLN03145 61 FIPVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIE 140 (365)
T ss_pred ccCceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHH
Confidence 345678999999999999999987643211 122357999999999999999999999999987655545677
Q ss_pred HHHHHHHHHHHHHHHhhhc-ccccccCCcEEEEEEeCCeEEEEEcccceEEEEeCCeeEEcCCCCCCCChhHHHHHHHcC
Q 022796 100 SAIADAYSHTDSEFLKSEN-NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAG 178 (292)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~-~~~~~~gtT~~~~~i~~~~~~~~~vGDsr~y~~r~~~~~~lt~dh~~~~~~~~~~~~~~~ 178 (292)
..+.++|.+++.++..... .....+|||++++++.++++|++|+||||+|+++++++++||+||++.++.|+.|+...|
T Consensus 141 ~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~G 220 (365)
T PLN03145 141 KVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASG 220 (365)
T ss_pred HHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcC
Confidence 8899999999999876532 223349999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEeCCceeecceeecccccccccccc-------eeecCCceEEEEecCCCeEEEEEcCCCccCCCHHHHHHHH----c
Q 022796 179 GFVMWAGTWRVGGVLAVSRAFGDRLLKQ-------YVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI----K 247 (292)
Q Consensus 179 g~~~~~~~~~~~~~~~ltralG~~~~~~-------~~~~~p~~~~~~~~~~~d~lll~SDGv~~~l~~~~i~~il----~ 247 (292)
|.+. ..+.++.+.+||+||+..++. .+.++|++..+.+..++++|||||||||++++.+++.+++ .
T Consensus 221 g~v~---~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~ 297 (365)
T PLN03145 221 GYVY---DGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQ 297 (365)
T ss_pred Ccee---cceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHh
Confidence 9885 345667778999999876643 2568999999999876678889999999999999975544 4
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCccEEEEEEccCCCCCCCCC
Q 022796 248 PIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGGSSFP 289 (292)
Q Consensus 248 ~~~~~~~~a~~L~~~a~~~~~~Dn~T~ilv~l~~~~~~~~~~ 289 (292)
...+++++|+.|++.|+.+++.||+|+|||+|...+.+..+.
T Consensus 298 ~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~~~~~~~ 339 (365)
T PLN03145 298 EHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPPPNLVA 339 (365)
T ss_pred cCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCCCccccc
Confidence 456899999999999999999999999999998865554443
No 2
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-45 Score=312.86 Aligned_cols=243 Identities=31% Similarity=0.423 Sum_probs=211.0
Q ss_pred CCCceEEEEEeCCCC-CCCCCccEEeeecCCCCceEEEEEEecCCChHHHHHHHHHHHHHHHHhCCCC----c-hh-HHH
Q 022796 28 QNGKFSYGYASSPGK-RSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKF----I-SD-TKS 100 (292)
Q Consensus 28 ~~~~~~~~~~s~~G~-r~~neDa~~~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~----~-~~-~~~ 100 (292)
....+.++..|+.|. |..|||++++..+..... ..+++|||||||+.++++||+.+++.|.+.... . .+ ..+
T Consensus 4 ~~~~~~~~~~s~~g~~R~~NeD~~~~~~~~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~ 82 (262)
T COG0631 4 GILSLKVAGLSDVGTVRKHNEDAFLIKPNENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEE 82 (262)
T ss_pred ccceeeeeeeccCCCccCCCCcceeeccccCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHH
Confidence 456788999999999 999999999986433333 679999999999999999999999999875322 1 11 578
Q ss_pred HHHHHHHHHHHHHHhhh--cccccccCCcEEEEEEeCCeEEEEEcccceEEEEeCCeeEEcCCCCCCCChhHHHHHHHcC
Q 022796 101 AIADAYSHTDSEFLKSE--NNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAG 178 (292)
Q Consensus 101 ~l~~~~~~~~~~~~~~~--~~~~~~~gtT~~~~~i~~~~~~~~~vGDsr~y~~r~~~~~~lt~dh~~~~~~~~~~~~~~~ 178 (292)
.+.+.+..++..+.... ......||||++++++.+++++++||||||+|++|++.++++|.||++.++.++.++....
T Consensus 83 ~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~~~~~~~ 162 (262)
T COG0631 83 LLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQRGIITPE 162 (262)
T ss_pred HHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHHHhcCCCHH
Confidence 89999999999888775 3556789999999999999999999999999999999999999999999988888766555
Q ss_pred CeEEeCCceeecceeecccccccccccceeecCCceEEEEecCCCeEEEEEcCCCccCCCHHHHHHHHcCCCCHHHHHHH
Q 022796 179 GFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKR 258 (292)
Q Consensus 179 g~~~~~~~~~~~~~~~ltralG~~~~~~~~~~~p~~~~~~~~~~~d~lll~SDGv~~~l~~~~i~~il~~~~~~~~~a~~ 258 (292)
+... +|.++.+||+||+... ..|++....+.++ ++|||||||||+.++++++.+++....+++++++.
T Consensus 163 ~~~~------~~~~~~ltralG~~~~-----~~p~~~~~~~~~~-d~llL~SDGl~d~v~~~~i~~il~~~~~~~~~~~~ 230 (262)
T COG0631 163 EARS------HPRRNALTRALGDFDL-----LEPDITELELEPG-DFLLLCSDGLWDVVSDDEIVDILKNSETPQEAADK 230 (262)
T ss_pred HHHh------CccchhhhhhcCCCcc-----cceeEEEEEcCCC-CEEEEECCCCccCcCHHHHHHHHhcCCCHHHHHHH
Confidence 5443 3566689999998875 7999999999984 99999999999999999999999988899999999
Q ss_pred HHHHHHHcCCCCccEEEEEEccCCC
Q 022796 259 LMQEAYQRGSADNITCVVVRFLANQ 283 (292)
Q Consensus 259 L~~~a~~~~~~Dn~T~ilv~l~~~~ 283 (292)
|++.|+++++.||+|+|++++....
T Consensus 231 li~~a~~~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 231 LIELALEGGGPDNITVVLVRLNGEG 255 (262)
T ss_pred HHHHHHhcCCCCceEEEEEEeeccc
Confidence 9999999999999999999997765
No 3
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=4.1e-42 Score=306.20 Aligned_cols=244 Identities=39% Similarity=0.622 Sum_probs=205.3
Q ss_pred CCCCceEEEEEeCCCCCCCCCccEEeeecCCCCceEEEEEEecCCChHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHH
Q 022796 27 SQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAY 106 (292)
Q Consensus 27 ~~~~~~~~~~~s~~G~r~~neDa~~~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~l~~~~ 106 (292)
..+..+.++.+|.+|.|+.|||++.+... ....+|+|||||||..+++++++.+.+.+.+..... ....++.++
T Consensus 17 ~~~~~~~~g~~s~~G~R~~nED~~~v~~~----~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~~--~~~~l~~a~ 90 (381)
T PTZ00224 17 AGNSIFRCASACVNGYRESMEDAHLLYLT----DDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEPM--TDERMEELC 90 (381)
T ss_pred CCCccEEEEEEeCCCCCCCCCCeeEeccC----CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhccccc--cHHHHHHHH
Confidence 37888999999999999999999886532 334699999999999999999999988776543221 234588888
Q ss_pred HHHHHHHHhhhcccccccCCcEEEEEEe-CCeEEEEEcccceEEEEeCCeeEEcCCCCCCCChhHHHHHHHcCCeEEeCC
Q 022796 107 SHTDSEFLKSENNQNRDAGSTASTAILV-GDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAG 185 (292)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~gtT~~~~~i~-~~~~~~~~vGDsr~y~~r~~~~~~lt~dh~~~~~~~~~~~~~~~g~~~~~~ 185 (292)
..++.++..... ..|||+++++|. +.+++++||||||+|++|+|++++||+||++.+..++.|+...+|.+.
T Consensus 91 ~~~d~~i~~~~~----~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~--- 163 (381)
T PTZ00224 91 LEIDEEWMDSGR----EGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACGGRVV--- 163 (381)
T ss_pred HHHHHHHHhccc----CCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHccCEec---
Confidence 888888875432 368999988876 679999999999999999999999999999999999999999998875
Q ss_pred ceeecceeeccccccccccc---------ceeecCCceEEEEecCCCeEEEEEcCCCcc-CCCHHHHHHHHcC----CCC
Q 022796 186 TWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWD-VVTNEEAVAMIKP----IQD 251 (292)
Q Consensus 186 ~~~~~~~~~ltralG~~~~~---------~~~~~~p~~~~~~~~~~~d~lll~SDGv~~-~l~~~~i~~il~~----~~~ 251 (292)
..+..+.+.+||+||+..+| +.+.++|++..+.+.+ +|+|||||||||+ .++++++.+++.+ ..+
T Consensus 164 ~~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~-~D~llLaSDGL~d~~ls~eEi~~iv~~~l~~~~~ 242 (381)
T PTZ00224 164 SNRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQS-NDFIILACDGVFEGNFSNEEVVAFVKEQLETCDD 242 (381)
T ss_pred cccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCC-CCEEEEECCCcCcCccCHHHHHHHHHHHHhcCCC
Confidence 34666778999999986543 2356789999988876 7899999999999 7999999998863 368
Q ss_pred HHHHHHHHHHHHHHcCCCCccEEEEEEccCCCC
Q 022796 252 PEEAAKRLMQEAYQRGSADNITCVVVRFLANQG 284 (292)
Q Consensus 252 ~~~~a~~L~~~a~~~~~~Dn~T~ilv~l~~~~~ 284 (292)
++.+|+.|++.|+.+|+.||+|||||++...+.
T Consensus 243 ~~~aA~~Lv~~A~~rGs~DNITvIvV~~~~~~~ 275 (381)
T PTZ00224 243 LAVVAGRVCDEAIRRGSKDNISCLIVQLKDGAS 275 (381)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEEEeeCCCC
Confidence 999999999999999999999999999987753
No 4
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1.9e-39 Score=278.23 Aligned_cols=243 Identities=45% Similarity=0.689 Sum_probs=208.6
Q ss_pred EEEEEeCCCCCCCCCccEEeeecCCCCceEEEEEEecCCChHHHHHHHHHHHHHHHHhCCCC-----chhHHHHHHHHHH
Q 022796 33 SYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKF-----ISDTKSAIADAYS 107 (292)
Q Consensus 33 ~~~~~s~~G~r~~neDa~~~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~-----~~~~~~~l~~~~~ 107 (292)
.++..+..|.|+.|||++++...... .+..+++|||||||+..++++++.+++.+.+.... ...+...++.+++
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~~-~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~ 80 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLNN-EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFL 80 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCCC-CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 45666667779999999999754221 25689999999999999999999999998876543 2456778999999
Q ss_pred HHHHHHHhhhc--ccccccCCcEEEEEEeCCeEEEEEcccceEEEEeCCeeEEcCCCCCCCChhHHHHHHHcCCeEEeCC
Q 022796 108 HTDSEFLKSEN--NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAG 185 (292)
Q Consensus 108 ~~~~~~~~~~~--~~~~~~gtT~~~~~i~~~~~~~~~vGDsr~y~~r~~~~~~lt~dh~~~~~~~~~~~~~~~g~~~~~~ 185 (292)
.++..+..... .....+|||++++++..++++++|+||||+|++++++++++|.||++.+..+..++...++...
T Consensus 81 ~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~--- 157 (254)
T cd00143 81 RADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVS--- 157 (254)
T ss_pred HHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEE---
Confidence 99998877653 2455699999999999999999999999999999999999999999999888888988888654
Q ss_pred ceeecceeecccccccccccceeecCCceEEEEecCCCeEEEEEcCCCccCCCHHHHHHHHcCCC---CHHHHHHHHHHH
Q 022796 186 TWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQ---DPEEAAKRLMQE 262 (292)
Q Consensus 186 ~~~~~~~~~ltralG~~~~~~~~~~~p~~~~~~~~~~~d~lll~SDGv~~~l~~~~i~~il~~~~---~~~~~a~~L~~~ 262 (292)
....++.+.+|+++|....++....+|++....+.+++|+|||||||||+++++++|.+++.... +++++|+.|++.
T Consensus 158 ~~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~~d~ill~SDG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~l~~~ 237 (254)
T cd00143 158 NGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDL 237 (254)
T ss_pred eCEEcCceeeccccCCccccCCEEcCCeEEEEEeCCCCcEEEEECCCCeeccChHHHHHHHHHHhcccCHHHHHHHHHHH
Confidence 34666778999999998777667789999999995558999999999999999999999998876 799999999999
Q ss_pred HHHcCCCCccEEEEEEc
Q 022796 263 AYQRGSADNITCVVVRF 279 (292)
Q Consensus 263 a~~~~~~Dn~T~ilv~l 279 (292)
|...+..||+|+|++++
T Consensus 238 a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 238 ALRRGSHDNITVVVVRL 254 (254)
T ss_pred HHhCCCCCCEEEEEEeC
Confidence 99999999999999875
No 5
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=4.9e-40 Score=308.14 Aligned_cols=246 Identities=23% Similarity=0.293 Sum_probs=190.1
Q ss_pred CceEEEEEeCCCC-CCCCCccEEeeecC-----CCC---ceEEEEEEecCCChHHHHHHHHHHHHHHHHhCC----CCch
Q 022796 30 GKFSYGYASSPGK-RSSMEDFYETRIDG-----VEG---EIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHP----KFIS 96 (292)
Q Consensus 30 ~~~~~~~~s~~G~-r~~neDa~~~~~~~-----~~~---~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~----~~~~ 96 (292)
..++++..|++|. |+.|||++.+.... ..+ ....+|+|||||||+.+|++||+.+++.|.+.. ....
T Consensus 373 ~~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~ 452 (645)
T PRK14559 373 VSLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDEL 452 (645)
T ss_pred eeEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccc
Confidence 4689999999998 99999998775321 011 134689999999999999999888888776422 1111
Q ss_pred hHHHHHHHHHHHHHHHHHhhhcc----cccccCCcEEEEEEeCCeEEEEEcccceEEEE-eCCeeEEcCCCCCCCChhHH
Q 022796 97 DTKSAIADAYSHTDSEFLKSENN----QNRDAGSTASTAILVGDRLLVANVGDSRAVIC-RGGNAIAVSRDHKPDQTDER 171 (292)
Q Consensus 97 ~~~~~l~~~~~~~~~~~~~~~~~----~~~~~gtT~~~~~i~~~~~~~~~vGDsr~y~~-r~~~~~~lt~dh~~~~~~~~ 171 (292)
.....+++++..+|..+...... ....||||++++++.++++|++||||||+|++ |+|+++++|+||++.+...+
T Consensus 453 ~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~lv~ 532 (645)
T PRK14559 453 PDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQREIQ 532 (645)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHHHHH
Confidence 23567899999999999765322 34469999999999999999999999999998 46899999999998764333
Q ss_pred HHHHHcCCeEEeCCceeecceeecccccccccccceeecCCceEEEEecCCCeEEEEEcCCCccC--CCH---HHHHHHH
Q 022796 172 QRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDV--VTN---EEAVAMI 246 (292)
Q Consensus 172 ~~~~~~~g~~~~~~~~~~~~~~~ltralG~~~~~~~~~~~p~~~~~~~~~~~d~lll~SDGv~~~--l~~---~~i~~il 246 (292)
. | +.......+++.+.+||+||+...+ ..+|++..+.+.+ +|+|||||||||++ +.. +++..++
T Consensus 533 ~-----G--i~~~~a~~~p~~~~LTrALG~~~~~---~l~Pdi~~~~L~~-gD~lLLCSDGL~D~~~ve~~~~~~l~~il 601 (645)
T PRK14559 533 R-----G--VEPQIAYARPDAYQLTQALGPRDNS---AIQPDIQFLEIEE-DTLLLLCSDGLSDNDLLETHWQTHLLPLL 601 (645)
T ss_pred h-----C--CCHHHHhcCcccceeeeccCCCCCC---cccceEEEEEcCC-CCEEEEECCCCCCCcccchHHHHHHHHHH
Confidence 2 2 1112233346678999999976432 2579999988876 79999999999994 543 4556777
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCccEEEEEEccCCCCCC
Q 022796 247 KPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGGS 286 (292)
Q Consensus 247 ~~~~~~~~~a~~L~~~a~~~~~~Dn~T~ilv~l~~~~~~~ 286 (292)
....++.+++++|++.|+.+|+.||+|+||+++...+.-+
T Consensus 602 ~~~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~~~p~~~ 641 (645)
T PRK14559 602 SSSANLDQGLNKLIDLANQYNGHDNITAILVRLKVRPQLS 641 (645)
T ss_pred hcCCCHHHHHHHHHHHHHHcCCCCcEEEEEEEeccCCCCC
Confidence 7767899999999999999999999999999997766544
No 6
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=8.1e-39 Score=274.71 Aligned_cols=243 Identities=48% Similarity=0.740 Sum_probs=209.4
Q ss_pred CceEEEEEeCCCCCCCCCccEEeeecCCCCceEEEEEEecCCChHHHHHHHHHHHHHHHHhCCCCc----hhHHHHHHHH
Q 022796 30 GKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFI----SDTKSAIADA 105 (292)
Q Consensus 30 ~~~~~~~~s~~G~r~~neDa~~~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~----~~~~~~l~~~ 105 (292)
..+.++..+..|.|..|||++++.... ..+..+++||||+||..+++++++.+.+.+.+..... ..+...++.+
T Consensus 4 ~~~~~~~~~~~~~r~~neD~~~~~~~~--~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 81 (255)
T smart00332 4 LGLRYGLSSMQGVRKPMEDAHVITPDL--SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKA 81 (255)
T ss_pred CceeEEEecCCCCCCCCcceEEEeccC--CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHH
Confidence 446777766667799999999987431 2456899999999999999999999999998765433 2477789999
Q ss_pred HHHHHHHHHhhhccc--ccccCCcEEEEEEeCCeEEEEEcccceEEEEeCCeeEEcCCCCCCCChhHHHHHHHcCCeEEe
Q 022796 106 YSHTDSEFLKSENNQ--NRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW 183 (292)
Q Consensus 106 ~~~~~~~~~~~~~~~--~~~~gtT~~~~~i~~~~~~~~~vGDsr~y~~r~~~~~~lt~dh~~~~~~~~~~~~~~~g~~~~ 183 (292)
+..++.++....... ...+|||++++++..++++++|+||||+|++|++++.++|.||++.+..+..++...++.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~ 161 (255)
T smart00332 82 FLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVIN 161 (255)
T ss_pred HHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEEC
Confidence 999999887665332 356899999999999999999999999999999999999999999998899999999886653
Q ss_pred CCceeecceeecccccccccccceeecCCceEEEEecCCCeEEEEEcCCCccCCCHHHHHHHHcCCC---CHHHHHHHHH
Q 022796 184 AGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQ---DPEEAAKRLM 260 (292)
Q Consensus 184 ~~~~~~~~~~~ltralG~~~~~~~~~~~p~~~~~~~~~~~d~lll~SDGv~~~l~~~~i~~il~~~~---~~~~~a~~L~ 260 (292)
.++++.+.+|+++|....++.+..+|++....+..++|+|||||||||++++++++.+++.... ++.++++.|+
T Consensus 162 ---~~~~~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~~d~ill~SDGv~~~l~~~~i~~~~~~~~~~~~~~~~~~~l~ 238 (255)
T smart00332 162 ---GRVNGVLALSRAIGDFFLKPYVSAEPDVTVVELTEKDDFLILASDGLWDVLSNQEVVDIVRKHLSKSDPEEAAKRLI 238 (255)
T ss_pred ---CeECCeEecccccCCHhhcCCeEeeeEEEEEEecCCCcEEEEECCccccCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 2667778999999999888888899999999875558999999999999999999999998765 5999999999
Q ss_pred HHHHHcCCCCccEEEEE
Q 022796 261 QEAYQRGSADNITCVVV 277 (292)
Q Consensus 261 ~~a~~~~~~Dn~T~ilv 277 (292)
+.|..++..||+|+|++
T Consensus 239 ~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 239 DLALARGSKDNITVIVV 255 (255)
T ss_pred HHHHHcCCCCCeEEEEC
Confidence 99999999999999985
No 7
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-39 Score=264.06 Aligned_cols=266 Identities=34% Similarity=0.531 Sum_probs=228.0
Q ss_pred cCCCCCCCCCCccCCCCceEEEEEeCCCCCCCCCccEEeeec-CCCCceEEEEEEecCCChHHHHHHHHHHHHHHHHhCC
Q 022796 14 VHADDSPASGGGLSQNGKFSYGYASSPGKRSSMEDFYETRID-GVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHP 92 (292)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~s~~G~r~~neDa~~~~~~-~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~ 92 (292)
|+..+.-... +-+.++|+..|.+|+|-.+||++..... ...-..+.+|+|+|||.|+..+..|++.+++.+....
T Consensus 8 PkteKhn~~G----~GNglryg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse 83 (379)
T KOG0697|consen 8 PKTEKHNAEG----EGNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSE 83 (379)
T ss_pred cccccccccC----cCCceeeeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhH
Confidence 4444544444 7789999999999999999999886543 3345788999999999999999999999999887654
Q ss_pred CCc--------hhHHHHHHHHHHHHHHHHHhhh--cccccccCCcEEEEEEeCCeEEEEEcccceEEEEeCCeeEEcCCC
Q 022796 93 KFI--------SDTKSAIADAYSHTDSEFLKSE--NNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRD 162 (292)
Q Consensus 93 ~~~--------~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~gtT~~~~~i~~~~~~~~~vGDsr~y~~r~~~~~~lt~d 162 (292)
.+. .+....++..|.+.+..+.... ......+|+|++++++...++|+.|+||||+.+.|+|....-|+|
T Consensus 84 ~F~~~~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqD 163 (379)
T KOG0697|consen 84 EFRGMTKNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQD 163 (379)
T ss_pred HHhhhccCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccC
Confidence 332 3567788888888876554433 222233899999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHcCCeEEeCCceeecceeeccccccccccc---------ceeecCCceEEEEecCCCeEEEEEcCCC
Q 022796 163 HKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGL 233 (292)
Q Consensus 163 h~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ltralG~~~~~---------~~~~~~p~~~~~~~~~~~d~lll~SDGv 233 (292)
|-+..+.|+.|+.++||.+. ..+.++.+.++|||||..+| ++++++|++....-..++++|||+.||+
T Consensus 164 HKP~~p~EkeRIqnAGGSVM---IqRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGI 240 (379)
T KOG0697|consen 164 HKPYLPKEKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGI 240 (379)
T ss_pred CCCCChHHHHHHhcCCCeEE---EEEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccch
Confidence 99999999999999999987 67888999999999999988 4588999999999888789999999999
Q ss_pred ccCCCHHHHHHHHcCC----CCHHHHHHHHHHHHHHcCCCCccEEEEEEccCCCCCC
Q 022796 234 WDVVTNEEAVAMIKPI----QDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGGS 286 (292)
Q Consensus 234 ~~~l~~~~i~~il~~~----~~~~~~a~~L~~~a~~~~~~Dn~T~ilv~l~~~~~~~ 286 (292)
||+++.+++.++++.. .+....|+.+++.++..|++||+|+|++-|...++.+
T Consensus 241 wDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLhKGSRDNMsivlvcfp~APkv~ 297 (379)
T KOG0697|consen 241 WDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLHKGSRDNMSIVLVCFPGAPKVS 297 (379)
T ss_pred hhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHhccCccCceEEEEecCCCCCCC
Confidence 9999999999988664 6899999999999999999999999999997766543
No 8
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=1.7e-40 Score=285.12 Aligned_cols=238 Identities=49% Similarity=0.736 Sum_probs=197.6
Q ss_pred EEEEEeCCCCCCCCCccEEeeecC---CCCceEEEEEEecCCChHHHHHHHHHHHHHHHHhCCCCc--hhHHHHHHHHHH
Q 022796 33 SYGYASSPGKRSSMEDFYETRIDG---VEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFI--SDTKSAIADAYS 107 (292)
Q Consensus 33 ~~~~~s~~G~r~~neDa~~~~~~~---~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~--~~~~~~l~~~~~ 107 (292)
.+++.+..|.|+.|||.+.+..+. .......+|+|+|||||..++.++++.+.+.+.+..... ..+...+..+|.
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~ 80 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFL 80 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceee
Confidence 367888899999999999987653 245688999999999999999999999998777654322 257788888888
Q ss_pred H-HHHHHHhhhcc-cccccCCcEEEEEEeCCeEEEEEcccceEEEEeCCeeE-EcCCCCCCCChhHHHHHHHcCCeEEeC
Q 022796 108 H-TDSEFLKSENN-QNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAI-AVSRDHKPDQTDERQRIEDAGGFVMWA 184 (292)
Q Consensus 108 ~-~~~~~~~~~~~-~~~~~gtT~~~~~i~~~~~~~~~vGDsr~y~~r~~~~~-~lt~dh~~~~~~~~~~~~~~~g~~~~~ 184 (292)
. .+..+...... ....+|||++++++.++++|++|+||||+|+.+++... +||.||.+.++.|+.|+...||.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~- 159 (254)
T PF00481_consen 81 AFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVSE- 159 (254)
T ss_dssp HHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEEE-
T ss_pred ecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeecccccccc-
Confidence 8 76666652211 45569999999999999999999999999999999888 99999999999999999999999987
Q ss_pred Cceeecceeecccccccccccc----eeecCCceEEEEecCCCeEEEEEcCCCccCCCHHHHHHHHcCCCC----HHHHH
Q 022796 185 GTWRVGGVLAVSRAFGDRLLKQ----YVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQD----PEEAA 256 (292)
Q Consensus 185 ~~~~~~~~~~ltralG~~~~~~----~~~~~p~~~~~~~~~~~d~lll~SDGv~~~l~~~~i~~il~~~~~----~~~~a 256 (292)
..+..+.+.+||+||+..+++ .+.++|++..+.+.+.+++|||||||||++++.+++.+++....+ |+.+|
T Consensus 160 -~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a 238 (254)
T PF00481_consen 160 -NGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAA 238 (254)
T ss_dssp -TEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred -chhhhhccccccccccccccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhcCCcHHHHH
Confidence 778888899999999999998 899999999999998666999999999999999999999988644 89999
Q ss_pred HHHHHHHHHcCCCCcc
Q 022796 257 KRLMQEAYQRGSADNI 272 (292)
Q Consensus 257 ~~L~~~a~~~~~~Dn~ 272 (292)
+.|++.|+.+++.|||
T Consensus 239 ~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 239 EKLVDEAIARGSKDNI 254 (254)
T ss_dssp HHHHHHHHHTTHHSHE
T ss_pred HHHHHHHHhcCCCCCC
Confidence 9999999999999996
No 9
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-37 Score=273.25 Aligned_cols=255 Identities=53% Similarity=0.770 Sum_probs=219.0
Q ss_pred ceEEEEE-eCCCCCCCCCccEEeeec----CCCCc-eEEEEEEecCCChHHHHHHHHHHHHHHHHhCCCCchh---HHHH
Q 022796 31 KFSYGYA-SSPGKRSSMEDFYETRID----GVEGE-IVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISD---TKSA 101 (292)
Q Consensus 31 ~~~~~~~-s~~G~r~~neDa~~~~~~----~~~~~-~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~---~~~~ 101 (292)
.+..+.. +..|.|..+||++..... ...+. ...+|+|+|||||..+|+++.+.+...+.++...... ....
T Consensus 38 ~~~~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a 117 (330)
T KOG0698|consen 38 SYRLGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDA 117 (330)
T ss_pred cccceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHH
Confidence 3444444 777779999999987655 22333 5789999999999999999999999999988776653 7889
Q ss_pred HHHHHH-HHHHHHHhhhcccccccCCcEEEEEEeCC-eEEEEEcccceEEEEeCC-eeEEcCCCCCCCChhHHHHHHHcC
Q 022796 102 IADAYS-HTDSEFLKSENNQNRDAGSTASTAILVGD-RLLVANVGDSRAVICRGG-NAIAVSRDHKPDQTDERQRIEDAG 178 (292)
Q Consensus 102 l~~~~~-~~~~~~~~~~~~~~~~~gtT~~~~~i~~~-~~~~~~vGDsr~y~~r~~-~~~~lt~dh~~~~~~~~~~~~~~~ 178 (292)
++++|. +.+.++... .......|+|++++++.++ ++|++|+||||+.+.+.+ ..++||.||.+..+.|+.|+...|
T Consensus 118 ~~~~F~~~~D~~~~~~-~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~G 196 (330)
T KOG0698|consen 118 LRRAFLTKTDSEFLEK-REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAG 196 (330)
T ss_pred HHHHHHHHHHHHHHhh-ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcC
Confidence 999999 588888765 2223457888888888754 999999999999999765 799999999999999999999999
Q ss_pred CeEEeCC-ceeecceeeccccccccccc-ceeecCCceEEEEecCCCeEEEEEcCCCccCCCHHHHHHHHcC----CCCH
Q 022796 179 GFVMWAG-TWRVGGVLAVSRAFGDRLLK-QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDP 252 (292)
Q Consensus 179 g~~~~~~-~~~~~~~~~ltralG~~~~~-~~~~~~p~~~~~~~~~~~d~lll~SDGv~~~l~~~~i~~il~~----~~~~ 252 (292)
|.+.... ..|..+.+.++|+|||..++ +.+.++|++....+...+++|||+||||||.++.++..++++. ..++
T Consensus 197 G~v~~~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~ 276 (330)
T KOG0698|consen 197 GRVSNWGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELASISSP 276 (330)
T ss_pred CEEEEcCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhhccccH
Confidence 9998543 47889999999999999999 8899999999999998789999999999999999999999988 5689
Q ss_pred HHHHHHHHHHHHHcCCCCccEEEEEEccCCCCCC
Q 022796 253 EEAAKRLMQEAYQRGSADNITCVVVRFLANQGGS 286 (292)
Q Consensus 253 ~~~a~~L~~~a~~~~~~Dn~T~ilv~l~~~~~~~ 286 (292)
..++..|.+.|..+++.||+|||+|.|...+...
T Consensus 277 ~~a~~~l~~~a~~~~s~DnitvvvV~l~~~~~~~ 310 (330)
T KOG0698|consen 277 LAAAKLLATEALSRGSKDNITVVVVRLKSSPKSP 310 (330)
T ss_pred HHHHHHHHHHHhhcCCCCCeEEEEEEecCccccc
Confidence 9999999999999999999999999998776543
No 10
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-28 Score=208.74 Aligned_cols=163 Identities=36% Similarity=0.613 Sum_probs=145.1
Q ss_pred cCCcEEEEEEeCCeEEEEEcccceEEEEeCCeeEEcCCCCCCCChhHHHHHHHcCCeEEeCCceeecceeeccccccccc
Q 022796 124 AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRL 203 (292)
Q Consensus 124 ~gtT~~~~~i~~~~~~~~~vGDsr~y~~r~~~~~~lt~dh~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ltralG~~~ 203 (292)
+|||+++|++.+++++++|.||||+.+.|+|+.+-++.||-+..+.+-.||..+||.+... .|.++-+.|+|+||+..
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlD--GRVNGGLNLSRA~GDHa 407 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLD--GRVNGGLNLSRAFGDHA 407 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeec--ceecCccchhhhhhhhh
Confidence 8899999999999999999999999999999999999999999999999999999999864 47788889999999998
Q ss_pred cc---------ceeecCCceEEEEecCCCeEEEEEcCCCccCCCHHHHHHHHc----CCCCHHHHHHHHHHHHHHcC---
Q 022796 204 LK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK----PIQDPEEAAKRLMQEAYQRG--- 267 (292)
Q Consensus 204 ~~---------~~~~~~p~~~~~~~~~~~d~lll~SDGv~~~l~~~~i~~il~----~~~~~~~~a~~L~~~a~~~~--- 267 (292)
+| +++.+-|+++...++++++|++++.||+|++++.+++.++++ .+.....+|++|.+.++...
T Consensus 408 YK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~iceeL~D~CLAp~T~G 487 (542)
T KOG0699|consen 408 YKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEICEELCDACLAPSTDG 487 (542)
T ss_pred hhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHHHHHHHHhhcCCCCCC
Confidence 87 458899999999999989999999999999999999887764 44678899999999998752
Q ss_pred ---CCCccEEEEEEccCCCCCCCCC
Q 022796 268 ---SADNITCVVVRFLANQGGSSFP 289 (292)
Q Consensus 268 ---~~Dn~T~ilv~l~~~~~~~~~~ 289 (292)
+.||||+|++.|. .+....+|
T Consensus 488 DGTGCDNMT~ii~~Fk-rk~~elqp 511 (542)
T KOG0699|consen 488 DGTGCDNMTVIITTFK-RKSKELQP 511 (542)
T ss_pred CCcCCCcceEEEEEec-cchhhcCC
Confidence 4699999999997 33444444
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=7.1e-28 Score=208.97 Aligned_cols=220 Identities=36% Similarity=0.607 Sum_probs=175.6
Q ss_pred CCCccEEeeecCCCCceEEEEEEecCCChHHHHHHHHHHHHHHHHhC------------CCC------------------
Q 022796 45 SMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRH------------PKF------------------ 94 (292)
Q Consensus 45 ~neDa~~~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~------------~~~------------------ 94 (292)
.-||..-+... ...++.++||+|||||..++++.++.+..++..+ ...
T Consensus 84 ~~edrv~~~~s--~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~ 161 (390)
T KOG0700|consen 84 AEEDRVSVAVS--EENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSS 161 (390)
T ss_pred cccCcceeeee--ccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccc
Confidence 34555554433 3567799999999999999999999999888721 000
Q ss_pred ----chhHHHHHHHHHHHHHHHHHhhh------cccccccCCcEEEEEEeCCeEEEEEcccceEEEEe---CC---eeEE
Q 022796 95 ----ISDTKSAIADAYSHTDSEFLKSE------NNQNRDAGSTASTAILVGDRLLVANVGDSRAVICR---GG---NAIA 158 (292)
Q Consensus 95 ----~~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~gtT~~~~~i~~~~~~~~~vGDsr~y~~r---~~---~~~~ 158 (292)
...+.+.|.++|+++...+.... .+.-..+|++++++++.++.+|++|+||||+.+-+ ++ ...|
T Consensus 162 ~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~q 241 (390)
T KOG0700|consen 162 ADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQ 241 (390)
T ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEe
Confidence 24467788999999988886442 23334499999999999999999999999999743 33 3679
Q ss_pred cCCCCCCCChhHHHHHHHcCC---eEEeCCceeecceeeccccccccccc---------------------ceeecCCce
Q 022796 159 VSRDHKPDQTDERQRIEDAGG---FVMWAGTWRVGGVLAVSRAFGDRLLK---------------------QYVVADPEI 214 (292)
Q Consensus 159 lt~dh~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~ltralG~~~~~---------------------~~~~~~p~~ 214 (292)
||.||+..++.+.+||....- .+......|..|.++++||||+..+| |+++++|.+
T Consensus 242 LS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i 321 (390)
T KOG0700|consen 242 LSTDHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSI 321 (390)
T ss_pred cChhhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceE
Confidence 999999999999999875543 33344446999999999999987776 568999999
Q ss_pred EEEEecCCCeEEEEEcCCCccCCCHHHHHHHHcCCC----CHHHHHHHHHHHHHHc
Q 022796 215 QEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQ----DPEEAAKRLMQEAYQR 266 (292)
Q Consensus 215 ~~~~~~~~~d~lll~SDGv~~~l~~~~i~~il~~~~----~~~~~a~~L~~~a~~~ 266 (292)
+.+.+.+.+.||||+|||+|++++.+|+.+++..+. .-+.+|+.|++.|+..
T Consensus 322 ~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~ 377 (390)
T KOG0700|consen 322 THHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGR 377 (390)
T ss_pred EEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhh
Confidence 999999888999999999999999999999998852 2346788999988764
No 12
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.93 E-value=3.8e-24 Score=179.90 Aligned_cols=205 Identities=22% Similarity=0.266 Sum_probs=143.5
Q ss_pred CCCCCccEEeeecCCCCceEEEEEEecCCChHHH-----HHHHHH---HHHHHHHhCCCCchhHHHHHHHHHHHHHHHHH
Q 022796 43 RSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARA-----AEYVKH---NLFSNLIRHPKFISDTKSAIADAYSHTDSEFL 114 (292)
Q Consensus 43 r~~neDa~~~~~~~~~~~~~~~~~V~DG~Gg~~~-----~~~as~---~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 114 (292)
.+..||++++..+ ....+.+||||+|||.- +.+..+ ..-+.+.+......++...|..++.++.
T Consensus 88 ~~~GEDa~Fvss~----~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~---- 159 (330)
T KOG1379|consen 88 GKGGEDAWFVSSN----PHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAELK---- 159 (330)
T ss_pred CCCCCcceeeccC----cccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHh----
Confidence 3468999999843 45579999999998765 333332 2233333444455577777777766543
Q ss_pred hhhcccccccCCcEEEEEEe--CCeEEEEEcccceEEEEeCCeeEEcCCCCCCCChhHHHHHHHcCCeEEeCCceeecce
Q 022796 115 KSENNQNRDAGSTASTAILV--GDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGV 192 (292)
Q Consensus 115 ~~~~~~~~~~gtT~~~~~i~--~~~~~~~~vGDsr~y~~r~~~~~~lt~dh~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 192 (292)
.+ +...-.++|++++.++ ++++|++|+|||.+.++|+|++.+.|..+.+.-....+ + ..+..
T Consensus 160 ~~--~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN~PyQ--------L------s~~p~ 223 (330)
T KOG1379|consen 160 SQ--KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFNTPYQ--------L------SSPPE 223 (330)
T ss_pred hc--CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccCCcee--------e------ccCCc
Confidence 22 1222367888888887 89999999999999999999999999877654211111 0 00000
Q ss_pred eecccccccccccceeecCCceEEEEecCCCeEEEEEcCCCccCCCHHHHHHHHcCC-----CCHHHHHHHHHHHHHHc-
Q 022796 193 LAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPI-----QDPEEAAKRLMQEAYQR- 266 (292)
Q Consensus 193 ~~ltralG~~~~~~~~~~~p~~~~~~~~~~~d~lll~SDGv~~~l~~~~i~~il~~~-----~~~~~~a~~L~~~a~~~- 266 (292)
.. ..++++.. ...+...+.+.+ ||+|||+||||||++.+++|.+++... .+++..|+.|.+.|.+.
T Consensus 224 ~~-~~~~~d~p------~~ad~~~~~v~~-GDvIilATDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls 295 (330)
T KOG1379|consen 224 GY-SSYISDVP------DSADVTSFDVQK-GDVIILATDGLFDNLPEKEILSILKGLDARGNLDLQVTAQKIAEKARELS 295 (330)
T ss_pred cc-cccccCCc------cccceEEEeccC-CCEEEEecccccccccHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhc
Confidence 00 22334332 355777888887 799999999999999999999999654 57899999999988764
Q ss_pred ----------------------CCCCccEEEEEEc
Q 022796 267 ----------------------GSADNITCVVVRF 279 (292)
Q Consensus 267 ----------------------~~~Dn~T~ilv~l 279 (292)
|++||||+||..+
T Consensus 296 ~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 296 RDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred cCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 5689999999753
No 13
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.89 E-value=8.4e-22 Score=166.09 Aligned_cols=221 Identities=29% Similarity=0.468 Sum_probs=160.6
Q ss_pred ceEEEEEEecCCChHHHHHHHHHHHHHHHHhCCC--------------------------Cc--------------hhHH
Q 022796 60 EIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPK--------------------------FI--------------SDTK 99 (292)
Q Consensus 60 ~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~--------------------------~~--------------~~~~ 99 (292)
....+|.++|||.|..++-.|++.+.+.+.++.. .+ .-..
T Consensus 142 ~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LVi 221 (493)
T KOG1323|consen 142 ADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLVI 221 (493)
T ss_pred CcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhhH
Confidence 4567999999999999999999987665543210 00 0123
Q ss_pred HHHHHHHHHHHHHHHhhhcccccccCCcEEEEEEeCCeEEEEEcccceEEEEeCCeeEEcCCCCCCCChhHHHHHHHcC-
Q 022796 100 SAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAG- 178 (292)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~i~~~~~~~~~vGDsr~y~~r~~~~~~lt~dh~~~~~~~~~~~~~~~- 178 (292)
-.++.+|+..+..+.+.........|||+++++...+++|++|.||||++++|+++++.++++-++.. |++|++...
T Consensus 222 GAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPet--ERqRlQ~Laf 299 (493)
T KOG1323|consen 222 GALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPET--ERQRLQELAF 299 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcHH--HHHHHHHHhh
Confidence 45666777776666655544455588999999999999999999999999999999999999988765 555554322
Q ss_pred -------CeEE--------------------------------------------eCCceeecceeeccccccccccc--
Q 022796 179 -------GFVM--------------------------------------------WAGTWRVGGVLAVSRAFGDRLLK-- 205 (292)
Q Consensus 179 -------g~~~--------------------------------------------~~~~~~~~~~~~ltralG~~~~~-- 205 (292)
+.++ .....++-+-+.++|-+||..++
T Consensus 300 ~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lkv~ 379 (493)
T KOG1323|consen 300 RNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLKVV 379 (493)
T ss_pred cChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceeeee
Confidence 1110 11122334446899999987665
Q ss_pred -------ceeecCCceEEEEec----CCCeEEEEEcCCCccCCCHHHHHHHHcCC------CCHH---HHHHHHHHHHHH
Q 022796 206 -------QYVVADPEIQEEVID----SSLEFLILASDGLWDVVTNEEAVAMIKPI------QDPE---EAAKRLMQEAYQ 265 (292)
Q Consensus 206 -------~~~~~~p~~~~~~~~----~~~d~lll~SDGv~~~l~~~~i~~il~~~------~~~~---~~a~~L~~~a~~ 265 (292)
|.+.+.|++....+. ..+|++||+|||+||+++.+++..+++.. .+|. .+++.|+..|..
T Consensus 380 dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~arg 459 (493)
T KOG1323|consen 380 DSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAARG 459 (493)
T ss_pred cCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcC
Confidence 557788999998876 35689999999999999999998888664 2333 466777776643
Q ss_pred c-------------CCCCccEEEEEEccCC
Q 022796 266 R-------------GSADNITCVVVRFLAN 282 (292)
Q Consensus 266 ~-------------~~~Dn~T~ilv~l~~~ 282 (292)
. ++.||||+.|+-+..-
T Consensus 460 ~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~ 489 (493)
T KOG1323|consen 460 QQKDRGWRMNNGGLGSGDDISVFVIPLKYC 489 (493)
T ss_pred ccCCCceeccCCCcCCCCceEEEEEeccCC
Confidence 2 4679999999987543
No 14
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.88 E-value=1.7e-21 Score=162.77 Aligned_cols=177 Identities=24% Similarity=0.349 Sum_probs=98.6
Q ss_pred EeCCCCCCCCCccEEeeecCCCCceEEEEEEecCCChHH----HHHHHHHHHHHHHHhCCCCchh--HHHHHHHHHHHHH
Q 022796 37 ASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGAR----AAEYVKHNLFSNLIRHPKFISD--TKSAIADAYSHTD 110 (292)
Q Consensus 37 ~s~~G~r~~neDa~~~~~~~~~~~~~~~~~V~DG~Gg~~----~~~~as~~~~~~l~~~~~~~~~--~~~~l~~~~~~~~ 110 (292)
.|++|.++.|||++.+... .+..+++||||+|+.. +++++++.+.+.+.+....... ....++.+.+...
T Consensus 3 ~sh~~~~~~nqD~~~~~~~----~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD----DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEIL 78 (212)
T ss_dssp ----TTSSS--EEEEEE-T----CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeC----CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH
Confidence 4788999999999997644 3335779999999544 4555666666666666554332 2233333333333
Q ss_pred HHH-----HhhhcccccccCCcEEEEEEeCCeEEEEEcccceEEE-EeCCeeEEcCCCCCCCChhHHHHHHHcCCeEEeC
Q 022796 111 SEF-----LKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVI-CRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWA 184 (292)
Q Consensus 111 ~~~-----~~~~~~~~~~~gtT~~~~~i~~~~~~~~~vGDsr~y~-~r~~~~~~lt~dh~~~~~~~~~~~~~~~g~~~~~ 184 (292)
..+ ..........++||++++++.+++++++|+||||+|+ .+++.+..++.+|+... .
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~~~----~------------ 142 (212)
T PF13672_consen 79 SIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSGEY----P------------ 142 (212)
T ss_dssp HHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BHHH----H------------
T ss_pred HHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccchh----h------------
Confidence 221 1112445566899999999999999999999999975 57999999999997211 0
Q ss_pred CceeecceeecccccccccccceeecCC--ceEEEEecCCCeEEEEEcCCCccCCCHHH-HHHHHcCC
Q 022796 185 GTWRVGGVLAVSRAFGDRLLKQYVVADP--EIQEEVIDSSLEFLILASDGLWDVVTNEE-AVAMIKPI 249 (292)
Q Consensus 185 ~~~~~~~~~~ltralG~~~~~~~~~~~p--~~~~~~~~~~~d~lll~SDGv~~~l~~~~-i~~il~~~ 249 (292)
.-+..+.... +.+ ++..+.+.+ ++.|+|||||||+.+...+ +..++...
T Consensus 143 ---------~~~~~~~~~~------~~~~~~~~~~~~~~-~d~ilL~SDG~~~~l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 143 ---------NQTRSLTGDD------PEPDVQYGSIPLEE-GDVILLCSDGVWDNLRSYEDLEQFLKDL 194 (212)
T ss_dssp ---------HCTTSCCHHC------CCTETEEEEEE--T-T-EEEEE-HHHHTTS-HHHHHHHH----
T ss_pred ---------hhhhccCccc------cccCCeEEEEEcCC-CCEEEEECcCccccCCCHHHHHHHhhhc
Confidence 0122332211 233 344444444 7999999999999998654 66666553
No 15
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.84 E-value=3e-20 Score=175.41 Aligned_cols=246 Identities=26% Similarity=0.408 Sum_probs=207.6
Q ss_pred ceEEEEEeCCCCCCCCCccEEeeecCCCCceEEEEEEecCCChHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHH
Q 022796 31 KFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTD 110 (292)
Q Consensus 31 ~~~~~~~s~~G~r~~neDa~~~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~l~~~~~~~~ 110 (292)
.|.+|++-..|.|.++--+.....++. ......|+++||-+......+....+.+++.+......+-.+.++..|...+
T Consensus 521 ~~t~Gv~~~~gqrnk~c~~~~~v~nf~-~~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et~~mr~~fl~~~ 599 (1081)
T KOG0618|consen 521 LWTYGVAGVSGQRNKVCSRAVWVENFF-LNPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNETEQMRNTFLRLN 599 (1081)
T ss_pred heeeccchhcccccchhhhhhhhhhcc-cCCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHh
Confidence 467999999999777665544333322 3345799999999999999999999999999876666666667999999999
Q ss_pred HHHHhhhcccccccCCcEEEEEEe--------CCeEEEEEcccceEEEEeCCeeEEcCCCCCCC-ChhHHHHHHHcCCeE
Q 022796 111 SEFLKSENNQNRDAGSTASTAILV--------GDRLLVANVGDSRAVICRGGNAIAVSRDHKPD-QTDERQRIEDAGGFV 181 (292)
Q Consensus 111 ~~~~~~~~~~~~~~gtT~~~~~i~--------~~~~~~~~vGDsr~y~~r~~~~~~lt~dh~~~-~~~~~~~~~~~~g~~ 181 (292)
+++-..... -|..++.+.|. ..+++.|++|+|.+.+.++|+-.++|+-..+. .+.|.+|+..++|++
T Consensus 600 rklg~~g~~----lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i 675 (1081)
T KOG0618|consen 600 RKLGEEGQV----LGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGFI 675 (1081)
T ss_pred hhhhhhhcc----ccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHHHHHHhcCee
Confidence 998544332 45555555554 23789999999999999999988888877555 688889999999998
Q ss_pred EeCCceeecceeecccccccccccceeecCCceEEEEecCCCeEEEEEcCCCccCCCHHHHHHHHcCCCCHHHHHHHHHH
Q 022796 182 MWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQ 261 (292)
Q Consensus 182 ~~~~~~~~~~~~~ltralG~~~~~~~~~~~p~~~~~~~~~~~d~lll~SDGv~~~l~~~~i~~il~~~~~~~~~a~~L~~ 261 (292)
.. .++..|+...||++|.....|.+.+.|++....+++.+++||+++-++|++++-++..+.++...+|-.+|+.|.+
T Consensus 676 ~e--d~k~ngvt~~tR~iG~~~l~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~~dpL~AAkKL~d 753 (1081)
T KOG0618|consen 676 TE--DNKLNGVTSSTRAIGPFSLFPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNVEDPLLAAKKLCD 753 (1081)
T ss_pred cC--CCeeeceeeeeeecccccccccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcCCchHHHHHHHHH
Confidence 75 6678888899999999999999999999999999988999999999999999999999999988999999999999
Q ss_pred HHHHcCCCCccEEEEEEccCCC
Q 022796 262 EAYQRGSADNITCVVVRFLANQ 283 (292)
Q Consensus 262 ~a~~~~~~Dn~T~ilv~l~~~~ 283 (292)
.|..+|+.||++++||++....
T Consensus 754 ~AqSYgc~~nv~vlVv~l~~~~ 775 (1081)
T KOG0618|consen 754 LAQSYGCAENVSVLVVRLNHLE 775 (1081)
T ss_pred HHHhcccccCeeEEEEEeecch
Confidence 9999999999999999986654
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.82 E-value=3.2e-18 Score=140.86 Aligned_cols=184 Identities=19% Similarity=0.178 Sum_probs=134.2
Q ss_pred eEEEEEeCCCCCCCCCccEEeeecCCCCceEEEEEEecCCChHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 022796 32 FSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDS 111 (292)
Q Consensus 32 ~~~~~~s~~G~r~~neDa~~~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~ 111 (292)
+.++....++ ...+.|.+.+... .++..+++|+||+|+...|.+++..+...+.+....... +...+..+++
T Consensus 4 ~~~~~~~~p~-~~~~GD~~~~~~~---~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~~----~~~~l~~~n~ 75 (193)
T smart00331 4 GLIAQYYEDA-TQVGGDFYDVVKL---PEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGIS----LSQILERLNR 75 (193)
T ss_pred eEEEEEEcch-HhcCccEEEEEEe---CCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCCC----HHHHHHHHHH
Confidence 4555555555 5788899987644 233579999999998888889999988888765443222 4445566666
Q ss_pred HHHhhhcccccccCCcEEEEEE--eCCeEEEEEcccceEEEEe-CCeeEEcCCCCCCCChhHHHHHHHcCCeEEeCCcee
Q 022796 112 EFLKSENNQNRDAGSTASTAIL--VGDRLLVANVGDSRAVICR-GGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWR 188 (292)
Q Consensus 112 ~~~~~~~~~~~~~gtT~~~~~i--~~~~~~~~~vGDsr~y~~r-~~~~~~lt~dh~~~~~~~~~~~~~~~g~~~~~~~~~ 188 (292)
.+.... ...+++|++++++ ..++++++|+||+|+|+++ ++...+.+.+.
T Consensus 76 ~l~~~~---~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~------------------------- 127 (193)
T smart00331 76 AIYENG---EDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDL------------------------- 127 (193)
T ss_pred HHHhcC---CCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCC-------------------------
Confidence 665542 3348999999998 5889999999999999999 66555555442
Q ss_pred ecceeecccccccccccceeecCCceEEEEecCCCeEEEEEcCCCccCCCHHHHHHHHcCC--CCHHHHHHHHHHHHH
Q 022796 189 VGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPI--QDPEEAAKRLMQEAY 264 (292)
Q Consensus 189 ~~~~~~ltralG~~~~~~~~~~~p~~~~~~~~~~~d~lll~SDGv~~~l~~~~i~~il~~~--~~~~~~a~~L~~~a~ 264 (292)
+..+|.... .+++...+.+.+ ||+|+|+|||+++.+.++++.+++.++ .++++.++.|++.+.
T Consensus 128 -------~~~lG~~~~-----~~~~~~~~~l~~-gd~l~l~TDGl~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 128 -------GAPLGLEPD-----VEVDVRELTLEP-GDLLLLYTDGLTEARNPERLEELLEELLGSPPAEIAQRILEELL 192 (193)
T ss_pred -------CceeeeCCC-----CcceeEEEeeCC-CCEEEEECCCccccCChHHHHHHHHHhcCCCHHHHHHHHHHHHh
Confidence 233453221 335566666666 799999999999999999999999876 468888888887654
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.76 E-value=3.3e-17 Score=159.15 Aligned_cols=201 Identities=20% Similarity=0.187 Sum_probs=143.2
Q ss_pred CceEEEEEeCC-CCCCCCCccEEeeecCCCCceEEEEEEecCCChHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHH
Q 022796 30 GKFSYGYASSP-GKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSH 108 (292)
Q Consensus 30 ~~~~~~~~s~~-G~r~~neDa~~~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~l~~~~~~ 108 (292)
..+.++++... +.+..+.|.+.+... .++...++|+||+|+...|..++..+.+.+.+......+ ...+++.
T Consensus 550 ~~~~~g~a~~~k~g~~vsGD~y~~~~l---~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~----~~~ai~~ 622 (764)
T TIGR02865 550 YHVSTGVARAAKDGELVSGDSYSFGKL---SAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFD----REVAIKT 622 (764)
T ss_pred eeehhhHHHhcCCCCcccCceEEEEEE---CCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHH
Confidence 34444455433 337899999987643 234478999999997777778888877777653322222 2556666
Q ss_pred HHHHHHhhhcccccccCCcEEEEEEe--CCeEEEEEcccceEEEEeCCeeEEcCCCCCCCChhHHHHHHHcCCeEEeCCc
Q 022796 109 TDSEFLKSENNQNRDAGSTASTAILV--GDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGT 186 (292)
Q Consensus 109 ~~~~~~~~~~~~~~~~gtT~~~~~i~--~~~~~~~~vGDsr~y~~r~~~~~~lt~dh~~~~~~~~~~~~~~~g~~~~~~~ 186 (292)
+|..+..... ..+.+|+.+++++ .+++.++++|+++.|+.|++.+.+++..+.+
T Consensus 623 lN~~L~~~~~---~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP--------------------- 678 (764)
T TIGR02865 623 VNSILSLRST---DEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP--------------------- 678 (764)
T ss_pred HHHHHHhCCC---CCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce---------------------
Confidence 6776654422 2368999999996 7899999999999999999988888654332
Q ss_pred eeecceeecccccccccccceeecCCceEEEEecCCCeEEEEEcCCCccCCCHHH-----HHHHHcCC--CCHHHHHHHH
Q 022796 187 WRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEE-----AVAMIKPI--QDPEEAAKRL 259 (292)
Q Consensus 187 ~~~~~~~~ltralG~~~~~~~~~~~p~~~~~~~~~~~d~lll~SDGv~~~l~~~~-----i~~il~~~--~~~~~~a~~L 259 (292)
+|-.. ..+++..+..+.+ ||+|+|+|||+++..++.+ +.+++... .+|+++++.|
T Consensus 679 ------------lGil~-----~~~~~~~~~~L~~-GD~Lll~SDGv~E~~~~~~~~~~~l~~~l~~~~~~~p~ela~~I 740 (764)
T TIGR02865 679 ------------IGILD-----EVDVELVRKKLKN-GDLIVMVSDGVLEGEKEVEGKVLWLVRKLKETNTNDPEEIAEYL 740 (764)
T ss_pred ------------eEecc-----CCccceEEEEeCC-CCEEEEECCCCCcCCcccccHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 22100 1345566666666 7999999999999876433 77777543 5899999999
Q ss_pred HHHHHHcC---CCCccEEEEEEc
Q 022796 260 MQEAYQRG---SADNITCVVVRF 279 (292)
Q Consensus 260 ~~~a~~~~---~~Dn~T~ilv~l 279 (292)
++.+.+.. ..||+|++++++
T Consensus 741 l~~a~~~~~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 741 LEKAKELRSGKIKDDMTVIVAKV 763 (764)
T ss_pred HHHHHHhcCCCCCCCeEEEEEEe
Confidence 99997653 479999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.60 E-value=1e-13 Score=113.91 Aligned_cols=175 Identities=19% Similarity=0.188 Sum_probs=112.5
Q ss_pred eEEEEEEecCCChHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhhcccccccCCcEEEEEEe--CCeE
Q 022796 61 IVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILV--GDRL 138 (292)
Q Consensus 61 ~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~i~--~~~~ 138 (292)
+..+++|+|++|....|.+.+..+...+......... ....+..+|+.+....... ...+|++++.++ .+++
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~----p~~~l~~ln~~l~~~~~~~--~~~~t~~~~~~d~~~~~l 76 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD----PEELLEALNRRLYRDLKGD--NRYATACYAIIDPETGTL 76 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS----HHHHHHHHHHHHHHHTTTT--STTEEEEEEEEETTTTEE
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHhhhc--cccceEEEEEecccceEE
Confidence 4578999999996555556666555555443222222 3445555566664433222 367788888876 7789
Q ss_pred EEEEcccceEEEEeC--CeeEEcCCCCCCCChhHHHHHHHcCCeEEeCCceeecceeecccccccccccceeecCCceEE
Q 022796 139 LVANVGDSRAVICRG--GNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQE 216 (292)
Q Consensus 139 ~~~~vGDsr~y~~r~--~~~~~lt~dh~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ltralG~~~~~~~~~~~p~~~~ 216 (292)
+++++|+++++++++ +....+.....+ +|-.. ........
T Consensus 77 ~~~~aG~~~~l~~~~~~~~~~~~~~~~~~---------------------------------lG~~~-----~~~~~~~~ 118 (193)
T PF07228_consen 77 TYANAGHPPPLLLRPGGREIEQLESEGPP---------------------------------LGIFE-----DIDYQEQE 118 (193)
T ss_dssp EEEEESSSEEEEEETTCTEEEEETCSSBB---------------------------------CSSSC-----TTCEEEEE
T ss_pred EEeCCCCCCEEEEeccccceeecccCccc---------------------------------eeeec-----cccccceE
Confidence 999999999999998 444444332221 33211 02333444
Q ss_pred EEecCCCeEEEEEcCCCccCCCHH-------HHHHHHcC--CCCHHHHHHHHHHHHHHc---CCCCccEEEEEEcc
Q 022796 217 EVIDSSLEFLILASDGLWDVVTNE-------EAVAMIKP--IQDPEEAAKRLMQEAYQR---GSADNITCVVVRFL 280 (292)
Q Consensus 217 ~~~~~~~d~lll~SDGv~~~l~~~-------~i~~il~~--~~~~~~~a~~L~~~a~~~---~~~Dn~T~ilv~l~ 280 (292)
+.+.+ ||+|+|+|||+++....+ .+.+++.+ ..++++.++.|++.+... ...||+|+++++++
T Consensus 119 ~~l~~-gd~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 119 IQLEP-GDRLLLYTDGLFEALNEDGEFFGEERLLELLDENRGLSPQEIIDALLEAIDRFGKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp EE--T-TEEEEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS-HHHHHHHHHHHHHHHTTSSTSS-EEEEEEEE-
T ss_pred EEecc-ccEEEEeCCChhhccCCccchhHHHHHHHHHhhccCCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEEEC
Confidence 44555 899999999999998433 44566663 367899999999988773 47899999999873
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.73 E-value=3.9e-06 Score=75.98 Aligned_cols=199 Identities=18% Similarity=0.133 Sum_probs=125.1
Q ss_pred ceEEEEEeCCCCCCCCCccEEeeecCCCCceEEEEEEecCCC-hHHHHHHHHHHHHHHHHhCCCC-chhHHHHHHHHHHH
Q 022796 31 KFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHG-GARAAEYVKHNLFSNLIRHPKF-ISDTKSAIADAYSH 108 (292)
Q Consensus 31 ~~~~~~~s~~G~r~~neDa~~~~~~~~~~~~~~~~~V~DG~G-g~~~~~~as~~~~~~l~~~~~~-~~~~~~~l~~~~~~ 108 (292)
.+.++..+.+- +....|+|-+... +.....++|+|.+| |-.++-. +......+...... ...+ ...++.
T Consensus 148 ~~~i~~~~~~a-~~vGGD~yd~~~~---~~~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~~~~p----~~~l~~ 218 (367)
T COG2208 148 GIDIEAILVPA-SEVGGDYYDFIQL---GEKRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESGPLDP----ADVLET 218 (367)
T ss_pred cccceeeEeEH-HHcCCceEEEEEE---CCcEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhcccCCH----HHHHHH
Confidence 34444444433 2377888877644 23568999999999 5555433 33332222222211 1222 334555
Q ss_pred HHHHHHhhhcccccccCCcEEEEEEe--CCeEEEEEcccceEEEEeCCee---EEcCCCCCCCChhHHHHHHHcCCeEEe
Q 022796 109 TDSEFLKSENNQNRDAGSTASTAILV--GDRLLVANVGDSRAVICRGGNA---IAVSRDHKPDQTDERQRIEDAGGFVMW 183 (292)
Q Consensus 109 ~~~~~~~~~~~~~~~~gtT~~~~~i~--~~~~~~~~vGDsr~y~~r~~~~---~~lt~dh~~~~~~~~~~~~~~~g~~~~ 183 (292)
+|+.+....... +-+|+..++++ .+.+.++++|---.++++.++. ..+.
T Consensus 219 ~n~~~~~~~~~~---~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~----------------------- 272 (367)
T COG2208 219 LNRVLKQNLEED---MFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLT----------------------- 272 (367)
T ss_pred HHHHHHhcccCC---cEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEcc-----------------------
Confidence 565555443322 77888888886 8899999999999999986542 3222
Q ss_pred CCceeecceeecccccccccccceeecCCceEEEEecCCCeEEEEEcCCCcc-------CCCHHHHHHHHcC--CCCHHH
Q 022796 184 AGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWD-------VVTNEEAVAMIKP--IQDPEE 254 (292)
Q Consensus 184 ~~~~~~~~~~~ltralG~~~~~~~~~~~p~~~~~~~~~~~d~lll~SDGv~~-------~l~~~~i~~il~~--~~~~~~ 254 (292)
.....+|... ...+.+....+.+ ||.+++.|||+.+ .+..+...+++.. ...+++
T Consensus 273 ----------~~g~piG~~~-----~~~~~~~~~~l~~-gd~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~~~~~~e 336 (367)
T COG2208 273 ----------ALGLPIGLLP-----DYQYEVASLQLEP-GDLLVLYTDGVTEARNSDGEFFGLERLLKILGRLLGQPAEE 336 (367)
T ss_pred ----------CCCceeeecC-----CccchheeEEecC-CCEEEEEcCCeeeeecCCccEecHHHHHHHHHHHhCCCHHH
Confidence 2334455221 1344555555666 8999999999999 4666777777763 257888
Q ss_pred HHHHHHHHHHHc----CCCCccEEEEEEcc
Q 022796 255 AAKRLMQEAYQR----GSADNITCVVVRFL 280 (292)
Q Consensus 255 ~a~~L~~~a~~~----~~~Dn~T~ilv~l~ 280 (292)
+++.+.+...+. ...||+|+|++++.
T Consensus 337 ~~~~i~~~l~~~~~~~~~~DDiTll~lk~~ 366 (367)
T COG2208 337 ILEAILESLEELQGDQIQDDDITLLVLKVK 366 (367)
T ss_pred HHHHHHHHHHHhhCCccccCceEEEEEEec
Confidence 888888777653 34688999999874
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=88.05 E-value=7.5 Score=34.13 Aligned_cols=106 Identities=8% Similarity=0.007 Sum_probs=57.8
Q ss_pred CCCCccEEeeecCCCCceEEEEEEec--CCChHH-HHHHHHHHHHH-HHHhCCCCchhHHHHHHHHHHHHHHHHHhhhcc
Q 022796 44 SSMEDFYETRIDGVEGEIVGLFGVFD--GHGGAR-AAEYVKHNLFS-NLIRHPKFISDTKSAIADAYSHTDSEFLKSENN 119 (292)
Q Consensus 44 ~~neDa~~~~~~~~~~~~~~~~~V~D--G~Gg~~-~~~~as~~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 119 (292)
....|.+.+... +++...|.++| |||++. .+.+....++. .+...............+.+..+|+.+......
T Consensus 148 ~~~GD~~d~~~l---~~~~~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~~~~~~~~p~~~l~~lN~~l~~~~~~ 224 (303)
T PRK10693 148 DKPGLVLDIAAL---SDNDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLP 224 (303)
T ss_pred CCCccEEeeeec---CCCcEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHhcCCC
Confidence 456787766543 33446777888 555332 23333344333 444321100000001355666667777655322
Q ss_pred cccccCCcEEEEEEe--CCeEEEEEcccceEEEEeCCee
Q 022796 120 QNRDAGSTASTAILV--GDRLLVANVGDSRAVICRGGNA 156 (292)
Q Consensus 120 ~~~~~gtT~~~~~i~--~~~~~~~~vGDsr~y~~r~~~~ 156 (292)
. ..|+..++++ .+++.+++.|-...++..++.+
T Consensus 225 ~----~~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 225 G----QFPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred c----eeeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 1 2577777776 6789999999999884334433
No 21
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=61.78 E-value=5.2 Score=26.95 Aligned_cols=22 Identities=23% Similarity=0.350 Sum_probs=17.0
Q ss_pred ecCCCeEEEEEcCCCccCCCHH
Q 022796 219 IDSSLEFLILASDGLWDVVTNE 240 (292)
Q Consensus 219 ~~~~~d~lll~SDGv~~~l~~~ 240 (292)
+...|..||+++||+|=.+...
T Consensus 23 l~~~G~Rllva~nGv~lEv~r~ 44 (72)
T PF09436_consen 23 LERPGHRLLVASNGVFLEVRRP 44 (72)
T ss_pred cccCCcEEEEecCcEEEEEech
Confidence 3456899999999999765444
No 22
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=50.00 E-value=11 Score=26.79 Aligned_cols=50 Identities=18% Similarity=0.357 Sum_probs=32.8
Q ss_pred CCCeEEEEEcCCCccCCCHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCCccE
Q 022796 221 SSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNIT 273 (292)
Q Consensus 221 ~~~d~lll~SDGv~~~l~~~~i~~il~~~~~~~~~a~~L~~~a~~~~~~Dn~T 273 (292)
.++|-++|+.|||+-.+..++..+-++.. | ..+-.|-+...+||-.+.++
T Consensus 23 ~~~D~vlL~qdGV~aAl~~~~~~~sl~~~--p-~~~~alkeDl~ARGl~~~~s 72 (96)
T COG2168 23 TEGDAVLLLQDGVYAALKGNRYLASLRES--P-IKVYALKEDLLARGLTGQIS 72 (96)
T ss_pred cccCeEEEEcccchhhhcCcHHHHHHhcC--c-cceeeehhhHHhccchhhcC
Confidence 34799999999999999888877776663 2 22333444455555444333
No 23
>COG3315 O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=38.91 E-value=48 Score=29.12 Aligned_cols=96 Identities=13% Similarity=0.104 Sum_probs=55.9
Q ss_pred EEEEEcc-cceEEEEeCCe-eEEcCCCCCCCChhHHHHHHHcCCeEEeCCceeecceeecccccccccc-cceeecCCce
Q 022796 138 LLVANVG-DSRAVICRGGN-AIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLL-KQYVVADPEI 214 (292)
Q Consensus 138 ~~~~~vG-Dsr~y~~r~~~-~~~lt~dh~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ltralG~~~~-~~~~~~~p~~ 214 (292)
+.+.-+| |+|+|.+.++. +.+..-||+...+...+.+.+.++...- -.+++..... ..+.. .+
T Consensus 96 vViLgaGLDTRayRl~~~~~~~vfEvD~Pevi~~K~~~l~e~~~~~~~-----------~~~~Va~Dl~~~dw~~---~L 161 (297)
T COG3315 96 VVILGAGLDTRAYRLDWPKGTRVFEVDLPEVIEFKKKLLAERGATPPA-----------HRRLVAVDLREDDWPQ---AL 161 (297)
T ss_pred EEEeccccccceeecCCCCCCeEEECCCcHHHHHHHHHhhhcCCCCCc-----------eEEEEeccccccchHH---HH
Confidence 3333344 99999999884 9999999998887777777777654320 0111111100 00000 00
Q ss_pred EEEEecCCCeEEEEEcCCCccCCCHHHHHHHHcC
Q 022796 215 QEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP 248 (292)
Q Consensus 215 ~~~~~~~~~d~lll~SDGv~~~l~~~~i~~il~~ 248 (292)
...-+.. ..-.++..-||.-|++++++.+++..
T Consensus 162 ~~~G~d~-~~pt~~iaEGLl~YL~~~~v~~ll~~ 194 (297)
T COG3315 162 AAAGFDR-SRPTLWIAEGLLMYLPEEAVDRLLSR 194 (297)
T ss_pred HhcCCCc-CCCeEEEeccccccCCHHHHHHHHHH
Confidence 0000111 23455666899999999999887755
No 24
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=30.25 E-value=1e+02 Score=24.98 Aligned_cols=45 Identities=22% Similarity=0.443 Sum_probs=30.0
Q ss_pred CeEEEEEcCCCccC-----------CCHHHHHHHHc----CCCCHHHHHHHHHHHHHHcC
Q 022796 223 LEFLILASDGLWDV-----------VTNEEAVAMIK----PIQDPEEAAKRLMQEAYQRG 267 (292)
Q Consensus 223 ~d~lll~SDGv~~~-----------l~~~~i~~il~----~~~~~~~~a~~L~~~a~~~~ 267 (292)
+|.+|+.|.|||.- +.....=+.+. +..=|.+.|..|++.-..+|
T Consensus 71 DDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RG 130 (237)
T COG3700 71 DDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred CCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcC
Confidence 57999999999962 22222222222 22458899999999888775
No 25
>cd06409 PB1_MUG70 The MUG70 protein is a product of the meiotically up-regulated gene 70 which has a role in meiosis and harbors a PB1 domain. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domains depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic amino acid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is
Probab=26.48 E-value=69 Score=22.45 Aligned_cols=21 Identities=14% Similarity=0.234 Sum_probs=16.5
Q ss_pred CceEEEEecCCCeEEEEEcCC
Q 022796 212 PEIQEEVIDSSLEFLILASDG 232 (292)
Q Consensus 212 p~~~~~~~~~~~d~lll~SDG 232 (292)
..+....+..+||+++|+||.
T Consensus 42 ~~~~L~YlDDEgD~VllT~D~ 62 (86)
T cd06409 42 HLYALSYVDDEGDIVLITSDS 62 (86)
T ss_pred CcccEEEEcCCCCEEEEeccc
Confidence 355666677889999999996
No 26
>TIGR03735 PRTRC_A PRTRC system protein A. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated protein A.
Probab=22.63 E-value=2.6e+02 Score=22.83 Aligned_cols=59 Identities=17% Similarity=0.270 Sum_probs=36.4
Q ss_pred ecCCCeEEEEEcCCCccCCCHHHHHHHHcCC---------------------CCHHHHHHHHHHHHHHcCCCCccEEEEE
Q 022796 219 IDSSLEFLILASDGLWDVVTNEEAVAMIKPI---------------------QDPEEAAKRLMQEAYQRGSADNITCVVV 277 (292)
Q Consensus 219 ~~~~~d~lll~SDGv~~~l~~~~i~~il~~~---------------------~~~~~~a~~L~~~a~~~~~~Dn~T~ilv 277 (292)
+...|..+|+++||+|-.+....+.-+..-. .=+....+++++.|.+. .++-+..+|+
T Consensus 22 l~~~g~r~~~a~~G~~lev~r~wl~~~~~~~~~~~~~~PYg~~~~~~~~~~g~Ip~~l~~~ii~hAr~~-~P~EacG~Ia 100 (192)
T TIGR03735 22 LEKPGHRFIVAADGVWREVRRPWLHAIQRVAPASPITVPYGAVEETLEFLCGPIPASLLEEFAEAARAA-LPNEVAAWIV 100 (192)
T ss_pred cccCCcEEEEecCcEEEEEecHHHHHHHHhcccccccccceeeeeeEEEecCCCCHHHHHHHHHHHHhc-CCcceEEEEE
Confidence 3455899999999999877666554433211 01445677888888764 3444444444
Q ss_pred E
Q 022796 278 R 278 (292)
Q Consensus 278 ~ 278 (292)
+
T Consensus 101 g 101 (192)
T TIGR03735 101 W 101 (192)
T ss_pred E
Confidence 3
Done!