BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022799
(292 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/289 (70%), Positives = 239/289 (82%), Gaps = 3/289 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 160
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+SYICS
Sbjct: 161 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 219
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 279
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHARKQCA 288
FDELRDPN +LPNGR P LFNF EL P + LIP HAR Q A
Sbjct: 340 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQAA 387
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/289 (70%), Positives = 239/289 (82%), Gaps = 3/289 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 95 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 154
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+SYICS
Sbjct: 155 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 213
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 214 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 273
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 274 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 333
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHARKQCA 288
FDELRDPN +LPNGR P LFNF EL P + LIP HAR Q A
Sbjct: 334 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQAA 381
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/289 (70%), Positives = 239/289 (82%), Gaps = 3/289 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 146 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 205
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+SYICS
Sbjct: 206 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 264
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 265 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 324
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 325 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 384
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHARKQCA 288
FDELRDPN +LPNGR P LFNF EL P + LIP HAR Q A
Sbjct: 385 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQAA 432
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/289 (70%), Positives = 239/289 (82%), Gaps = 3/289 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 105 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 164
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+SYICS
Sbjct: 165 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 223
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 224 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 283
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 284 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 343
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHARKQCA 288
FDELRDPN +LPNGR P LFNF EL P + LIP HAR Q A
Sbjct: 344 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQAA 391
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/289 (70%), Positives = 239/289 (82%), Gaps = 3/289 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 103 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 162
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+SYICS
Sbjct: 163 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 221
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 222 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 281
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 282 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 341
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHARKQCA 288
FDELRDPN +LPNGR P LFNF EL P + LIP HAR Q A
Sbjct: 342 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQAA 389
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/289 (70%), Positives = 239/289 (82%), Gaps = 3/289 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 72 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 131
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+SYICS
Sbjct: 132 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 190
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 191 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 250
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 251 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 310
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHARKQCA 288
FDELRDPN +LPNGR P LFNF EL P + LIP HAR Q A
Sbjct: 311 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQAA 358
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 422 bits (1086), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/289 (70%), Positives = 239/289 (82%), Gaps = 3/289 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 80 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 139
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+SYICS
Sbjct: 140 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 198
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 199 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 258
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 259 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 318
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHARKQCA 288
FDELRDPN +LPNGR P LFNF EL P + LIP HAR Q A
Sbjct: 319 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQAA 366
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/289 (69%), Positives = 238/289 (82%), Gaps = 3/289 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 160
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+S ICS
Sbjct: 161 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 219
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 279
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHARKQCA 288
FDELRDPN +LPNGR P LFNF EL P + LIP HAR Q A
Sbjct: 340 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQAA 387
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 420 bits (1079), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/289 (69%), Positives = 238/289 (82%), Gaps = 3/289 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 79 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 138
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+S ICS
Sbjct: 139 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 257
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 258 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 317
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHARKQCA 288
FDELRDPN +LPNGR P LFNF EL P + LIP HAR Q A
Sbjct: 318 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQAA 365
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 420 bits (1079), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/289 (69%), Positives = 238/289 (82%), Gaps = 3/289 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 79 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 138
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+S ICS
Sbjct: 139 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 257
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 258 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 317
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHARKQCA 288
FDELRDPN +LPNGR P LFNF EL P + LIP HAR Q A
Sbjct: 318 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQAA 365
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 420 bits (1079), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/289 (69%), Positives = 238/289 (82%), Gaps = 3/289 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 75 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 134
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+S ICS
Sbjct: 135 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 193
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 194 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 253
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 254 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 313
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHARKQCA 288
FDELRDPN +LPNGR P LFNF EL P + LIP HAR Q A
Sbjct: 314 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQAA 361
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 419 bits (1078), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/289 (69%), Positives = 238/289 (82%), Gaps = 3/289 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 86 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 145
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+S ICS
Sbjct: 146 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 204
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 205 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 264
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 265 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 324
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHARKQCA 288
FDELRDPN +LPNGR P LFNF EL P + LIP HAR Q A
Sbjct: 325 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQAA 372
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/285 (70%), Positives = 237/285 (83%), Gaps = 3/285 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+SYICS
Sbjct: 127 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHAR 284
FDELRDPN +LPNGR P LFNF EL P + LIP HAR
Sbjct: 306 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHAR 349
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/285 (70%), Positives = 237/285 (83%), Gaps = 3/285 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+SYICS
Sbjct: 127 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHAR 284
FDELRDPN +LPNGR P LFNF EL P + LIP HAR
Sbjct: 306 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHAR 349
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/288 (69%), Positives = 237/288 (82%), Gaps = 3/288 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+SYICS
Sbjct: 127 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEF FPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 246 QIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHARKQC 287
FDELRDPN +LPNGR P LFNF EL P + LIP HAR Q
Sbjct: 306 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQA 352
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 417 bits (1071), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/288 (69%), Positives = 237/288 (82%), Gaps = 3/288 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+S ICS
Sbjct: 127 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHARKQC 287
FDELRDPN +LPNGR P LFNF EL P + LIP HAR Q
Sbjct: 306 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQA 352
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 416 bits (1069), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/285 (70%), Positives = 236/285 (82%), Gaps = 3/285 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+S ICS
Sbjct: 127 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHAR 284
FDELRDPN +LPNGR P LFNF EL P + LIP HAR
Sbjct: 306 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHAR 349
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 416 bits (1068), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/285 (70%), Positives = 236/285 (82%), Gaps = 3/285 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 71 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 130
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+S ICS
Sbjct: 131 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 189
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 190 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 249
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 250 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 309
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHAR 284
FDELRDPN +LPNGR P LFNF EL P + LIP HAR
Sbjct: 310 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHAR 353
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/285 (70%), Positives = 236/285 (82%), Gaps = 3/285 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 68 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 127
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+S ICS
Sbjct: 128 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 186
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 187 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 246
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 247 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 306
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHAR 284
FDELRDPN +LPNGR P LFNF EL P + LIP HAR
Sbjct: 307 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHAR 350
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 413 bits (1061), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/285 (69%), Positives = 235/285 (82%), Gaps = 3/285 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK D +YLNLVL+YVPETV+RV +H+ + Q +P+IYVKL
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+S ICS
Sbjct: 127 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHAR 284
FDELRDPN +LPNGR P LFNF EL P + LIP HAR
Sbjct: 306 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHAR 349
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/285 (69%), Positives = 234/285 (82%), Gaps = 3/285 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVP TV+RV +H+ + Q +P+IYVKL
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL 126
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+S ICS
Sbjct: 127 YMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+I+ MNPNYTEF FPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T LEA H F
Sbjct: 246 QIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHAR 284
FDELRDPN +LPNGR P LFNF EL P + LIP HAR
Sbjct: 306 FDELRDPNVKLPNGRDTPALFNFTTQELSSNP-PLATILIPPHAR 349
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 403 bits (1036), Expect = e-113, Method: Compositional matrix adjust.
Identities = 189/293 (64%), Positives = 237/293 (80%), Gaps = 3/293 (1%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
MR++ HPNVV LK F+S +K DE++LNLVLEYVPETV+R +H+ K+ Q MP++ +KL
Sbjct: 86 MRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKL 145
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y YQ+ R+LAYIH +IG+CHRDIKPQNLL++P + LKL DFGSAK+L+ GEPN+S ICS
Sbjct: 146 YMYQLLRSLAYIH-SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICS 204
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPELIFGAT YT IDIWS GCV+AEL+ GQPLFPGESG+DQLVEIIKVLGTP+RE
Sbjct: 205 RYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSRE 264
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+IK MNPNY E KFPQI+ HP+ K+F+ R PP+A+DL+SRLL+Y+P+ R TA+EAL HPF
Sbjct: 265 QIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324
Query: 240 FDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHARKQCAFLGL 292
FDELR R+PNGR LPPLFN+ EL P D++ +L+P+HA + G+
Sbjct: 325 FDELRTGEARMPNGRELPPLFNWTKEELSVRP-DLISRLVPQHAEAELLSRGI 376
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 296 bits (759), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 142/324 (43%), Positives = 214/324 (66%), Gaps = 43/324 (13%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKD---------------------------------ELYL 27
M++LDH N++ L F++T +++ YL
Sbjct: 54 MKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYL 113
Query: 28 NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNL 87
N+++EYVP+T+H+V+K + + +P+ + +Y YQ+ RA+ +IH ++G+CHRDIKPQNL
Sbjct: 114 NVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH-SLGICHRDIKPQNL 172
Query: 88 LVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVL 147
LVN + LKLCDFGSAK L+ EP+++ ICSR+YRAPEL+ GATEYT +ID+WS GCV
Sbjct: 173 LVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232
Query: 148 AELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQK 207
EL+LG+PLF GE+ +DQLV II+++GTPT+E++ MNP+YTE +FP +KA W KI +
Sbjct: 233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPE 292
Query: 208 RMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELRDP-------NTRLPNG--RFLPP 258
P A+DL+ ++L+Y P+LR EA+ HPFFD LR+ N+ P+G + +P
Sbjct: 293 GTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQ 352
Query: 259 LFNFKPHELKGVPVDMLVKLIPEH 282
LFNF P+EL +P ++L +++P++
Sbjct: 353 LFNFSPYELSIIPGNVLNRILPKN 376
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 279 bits (713), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 194/286 (67%), Gaps = 7/286 (2%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKD--ELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 58
+ +L HPN+V L+ F++ E+D ++YLN+V+EYVP+T+HR +++Y+ P I +K
Sbjct: 73 LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIK 132
Query: 59 LYFYQICRALAYIH-NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
++ +Q+ R++ +H ++ VCHRDIKP N+LVN LKLCDFGSAK L EPN++YI
Sbjct: 133 VFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYI 192
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
CSRYYRAPELIFG YT A+DIWS GC+ AE++LG+P+F G++ QL EI++VLG P+
Sbjct: 193 CSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPS 252
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQK---RMPPEAVDLVSRLLQYSPNLRSTALEA 234
RE ++ +NP++T+ K PW +F + EA DL+S LLQY P R EA
Sbjct: 253 REVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEA 312
Query: 235 LIHPFFDELRDPNTRLPNGRFLP-PLFNFKPHELKGVPVDMLVKLI 279
L HP+FDEL DP T+LPN + LP LF F P+E++ + KL+
Sbjct: 313 LCHPYFDELHDPATKLPNNKDLPEDLFRFLPNEIEVMSEAQKAKLV 358
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 164 bits (414), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 149/250 (59%), Gaps = 17/250 (6%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H NV+ ++ ++T + + +V + + +++++K SQ++ ++ + YQI
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLK-----SQQLSNDHICYFLYQIL 154
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY----ICSRY 121
R L YIH+ V HRD+KP NLL+N T LK+CDFG A++ + + + +R+
Sbjct: 155 RGLKYIHSA-NVLHRDLKPSNLLINT-TCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 272
Query: 182 KCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
C+ NY + P W K+F K +A+DL+ R+L ++PN R T EAL H
Sbjct: 273 NCIINMKARNYLQ-SLPSKTKVAWAKLFPKS-DSKALDLLDRMLTFNPNKRITVEEALAH 330
Query: 238 PFFDELRDPN 247
P+ ++ DP
Sbjct: 331 PYLEQYYDPT 340
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 154/272 (56%), Gaps = 26/272 (9%)
Query: 23 DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDI 82
+E+Y+ + E + +HRVI +Q + +++ + YQ RA+ +H + V HRD+
Sbjct: 87 NEVYI--IQELMQTDLHRVIS-----TQMLSDDHIQYFIYQTLRAVKVLHGS-NVIHRDL 138
Query: 83 KPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS-----------YICSRYYRAPELIFGA 131
KP NLL+N + LK+CDFG A+++ + + S Y+ +R+YRAPE++ +
Sbjct: 139 KPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTS 197
Query: 132 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP-TREEIKCM-NPNYT 189
+Y+ A+D+WS GC+LAEL L +P+FPG QL+ I ++GTP + +++C+ +P
Sbjct: 198 AKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAR 257
Query: 190 EF--KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELRDPN 247
E+ P A P K+F R+ P+ +DL+ R+L + P R TA EAL HP+ DPN
Sbjct: 258 EYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316
Query: 248 TRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI 279
P G +PP F H + + L KLI
Sbjct: 317 DE-PEGEPIPPSFFEFDHYKEALTTKDLKKLI 347
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 155/272 (56%), Gaps = 26/272 (9%)
Query: 23 DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDI 82
+E+Y+ + E + +HRVI +Q + +++ + YQ RA+ +H + V HRD+
Sbjct: 87 NEVYI--IQELMQTDLHRVIS-----TQMLSDDHIQYFIYQTLRAVKVLHGS-NVIHRDL 138
Query: 83 KPQNLLVNPHTHQLKLCDFGSAKVLVKG-----EPN------ISYICSRYYRAPELIFGA 131
KP NLL+N + LK+CDFG A+++ + EP + ++ +R+YRAPE++ +
Sbjct: 139 KPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTS 197
Query: 132 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP-TREEIKCM-NPNYT 189
+Y+ A+D+WS GC+LAEL L +P+FPG QL+ I ++GTP + +++C+ +P
Sbjct: 198 AKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAR 257
Query: 190 EF--KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELRDPN 247
E+ P A P K+F R+ P+ +DL+ R+L + P R TA EAL HP+ DPN
Sbjct: 258 EYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316
Query: 248 TRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI 279
P G +PP F H + + L KLI
Sbjct: 317 DE-PEGEPIPPSFFEFDHYKEALTTKDLKKLI 347
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 165/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 138
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 139 RGLKYIHSA-NVLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVA 193
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 254 EDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 312 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 362
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 147/253 (58%), Gaps = 23/253 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + LV + +++++K +Q + ++ + YQI
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLK-----TQHLSNDHICYFLYQIL 154
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 155 RGLKYIHSA-NVLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVA 209
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 269
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 270 EDLNCIINLKARNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQA 327
Query: 235 LIHPFFDELRDPN 247
L HP+ ++ DP+
Sbjct: 328 LAHPYLEQYYDPS 340
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 157 bits (396), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 165/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 134
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 135 RGLKYIHSA-NVLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVA 189
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 250 EDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 308 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 358
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 157 bits (396), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 165/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 138
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 139 RGLKYIHSA-NVLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVA 193
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 254 EDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 312 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 362
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 165/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 142
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 143 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVA 197
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 257
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 258 EDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 315
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 316 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 366
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 165/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 134
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 135 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVA 189
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 250 EDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 308 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 358
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 165/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 154
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 155 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVA 209
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 269
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 270 EDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 327
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 328 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 378
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 165/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 139
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 140 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVA 194
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 254
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 255 EDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 312
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 313 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 363
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 165/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 140
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 141 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVA 195
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 255
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 256 EDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 313
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 314 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 364
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 165/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 131
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 132 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVA 186
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 246
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 247 EDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 304
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 305 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 355
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 165/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 138
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 139 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVA 193
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 254 EDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 312 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 362
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 165/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 138
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 139 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVA 193
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 254 EDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 312 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 362
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 165/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 132
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 133 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVA 187
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 247
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 248 EDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 305
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 306 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 356
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 153/272 (56%), Gaps = 26/272 (9%)
Query: 23 DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDI 82
+E+Y+ + E + +HRVI +Q + +++ + YQ RA+ +H + V HRD+
Sbjct: 87 NEVYI--IQELMQTDLHRVIS-----TQMLSDDHIQYFIYQTLRAVKVLHGS-NVIHRDL 138
Query: 83 KPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS-----------YICSRYYRAPELIFGA 131
KP NLL+N + LK+CDFG A+++ + + S + +R+YRAPE++ +
Sbjct: 139 KPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTS 197
Query: 132 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP-TREEIKCM-NPNYT 189
+Y+ A+D+WS GC+LAEL L +P+FPG QL+ I ++GTP + +++C+ +P
Sbjct: 198 AKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAR 257
Query: 190 EF--KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELRDPN 247
E+ P A P K+F R+ P+ +DL+ R+L + P R TA EAL HP+ DPN
Sbjct: 258 EYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316
Query: 248 TRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI 279
P G +PP F H + + L KLI
Sbjct: 317 DE-PEGEPIPPSFFEFDHYKEALTTKDLKKLI 347
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 165/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 136
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 137 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVA 191
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 251
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 252 EDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 309
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 310 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 360
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 165/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 134
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 135 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVA 189
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 250 EDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 308 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 358
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 143/252 (56%), Gaps = 19/252 (7%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L HPN+VSL S E L LV E++ + + +V+ + Q +K+Y
Sbjct: 73 LKELHHPNIVSLIDVIHS-----ERCLTLVFEFMEKDLKKVLDENKTGLQDSQ---IKIY 124
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---I 117
YQ+ R +A+ H + HRD+KPQNLL+N LKL DFG A+ G P SY +
Sbjct: 125 LYQLLRGVAHCHQH-RILHRDLKPQNLLINSDG-ALKLADFGLARAF--GIPVRSYTHEV 180
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ +YRAP+++ G+ +Y+ ++DIWS GC+ AE++ G+PLFPG + DQL +I +LGTP
Sbjct: 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPN 240
Query: 178 REEIKCMN--PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
E + P + + F + PW I E +DL+S +L + PN R +A +A+
Sbjct: 241 PREWPQVQELPLWKQRTFQVFEKKPWSSIIPG-FCQEGIDLLSNMLCFDPNKRISARDAM 299
Query: 236 IHPFFDELRDPN 247
HP+F +L DP
Sbjct: 300 NHPYFKDL-DPQ 310
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 162/295 (54%), Gaps = 27/295 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 136
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 137 RGLKYIHSA-NVLHRDLKPSNLLLNT-TSDLKICDFGLARV---ADPDHDHTGFLTEYVA 191
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 251
Query: 179 EEIKC---MNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
E++ C + P PW+++F +A+DL+ ++L ++P+ R +AL
Sbjct: 252 EDLNCGINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 236 IHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
HP+ + DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 311 AHPYLAQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 360
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 164/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 132
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 133 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVA 187
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQ 247
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 248 EDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 305
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 306 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 356
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 154 bits (390), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 143/252 (56%), Gaps = 19/252 (7%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L HPN+VSL S E L LV E++ + + +V+ + Q +K+Y
Sbjct: 73 LKELHHPNIVSLIDVIHS-----ERCLTLVFEFMEKDLKKVLDENKTGLQDSQ---IKIY 124
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---I 117
YQ+ R +A+ H + HRD+KPQNLL+N LKL DFG A+ G P SY +
Sbjct: 125 LYQLLRGVAHCHQH-RILHRDLKPQNLLINSDG-ALKLADFGLARAF--GIPVRSYTHEV 180
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ +YRAP+++ G+ +Y+ ++DIWS GC+ AE++ G+PLFPG + DQL +I +LGTP
Sbjct: 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPN 240
Query: 178 REEIKCMN--PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
E + P + + F + PW I E +DL+S +L + PN R +A +A+
Sbjct: 241 PREWPQVQELPLWKQRTFQVFEKKPWSSIIPG-FCQEGIDLLSNMLCFDPNKRISARDAM 299
Query: 236 IHPFFDELRDPN 247
HP+F +L DP
Sbjct: 300 NHPYFKDL-DPQ 310
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 164/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K Q + ++ + YQI
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----CQHLSNDHICYFLYQIL 138
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 139 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVA 193
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 254 EDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 312 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 362
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 164/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 136
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 137 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVA 191
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 251
Query: 179 EEIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E++ C+ NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 252 EDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 309
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ + DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 310 LAHPYLAQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 360
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 163/293 (55%), Gaps = 23/293 (7%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 138
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY----ICSRY 121
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V + + + +R+
Sbjct: 139 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 182 KCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
C+ NY P PW+++F +A+DL+ ++L ++P+ R +AL H
Sbjct: 257 NCIINLKARNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 238 PFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
P+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 315 PYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 362
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 163/293 (55%), Gaps = 23/293 (7%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 139
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY----ICSRY 121
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V + + + +R+
Sbjct: 140 RGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 257
Query: 182 KCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
C+ NY P PW+++F +A+DL+ ++L ++P+ R +AL H
Sbjct: 258 NCIINLKARNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKRIEVEQALAH 315
Query: 238 PFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
P+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 316 PYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 363
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 153 bits (387), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 163/296 (55%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 134
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+
Sbjct: 135 RGLKYIHSA-NVLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVA 189
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 179 EE----IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E+ I NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 250 EDLNXIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 308 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 358
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 135/251 (53%), Gaps = 15/251 (5%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
++ + H NV+ L F + Y LV+ ++ + +++ + + ++
Sbjct: 95 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEK------IQY 148
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
YQ+ + L YIH+ GV HRD+KP NL VN +LK+ DFG A+ Y+ +
Sbjct: 149 LVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDC-ELKILDFGLARH--ADAEMTGYVVT 204
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
R+YRAPE+I Y +DIWS GC++AE+L G+ LF G+ +DQL +I+KV G P E
Sbjct: 205 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 264
Query: 180 EIKCMNPNYTEF---KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
++ +N + PQ + ++F R P+A DL+ ++L+ + R TA +AL
Sbjct: 265 FVQKLNDKAAKSYIQSLPQTPRKDFTQLF-PRASPQAADLLEKMLELDVDKRLTAAQALT 323
Query: 237 HPFFDELRDPN 247
HPFF+ RDP
Sbjct: 324 HPFFEPFRDPE 334
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 162/296 (54%), Gaps = 29/296 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
H N++ + + T + + +V + + +++++K +Q + ++ + YQI
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQIL 134
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYIC 118
R L YIH+ V HRD+KP NLL+N T LK+ DFG A+V +P+ Y+
Sbjct: 135 RGLKYIHSA-NVLHRDLKPSNLLLNT-TXDLKIXDFGLARV---ADPDHDHTGFLTEYVA 189
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+R+YRAPE++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 179 EE----IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
E+ I NY P PW+++F +A+DL+ ++L ++P+ R +A
Sbjct: 250 EDLNXIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 235 LIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI-PEHARKQCAF 289
L HP+ ++ DP+ + F F EL +P + L +LI E AR Q +
Sbjct: 308 LAHPYLEQYYDPS----DEPIAEAPFKFD-MELDDLPKEKLKELIFEETARFQPGY 358
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 150/285 (52%), Gaps = 50/285 (17%)
Query: 3 LLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L H N+V+L + + ++D + LV +Y+ +H VI+ + + ++ + Y
Sbjct: 65 LSGHENIVNLLNVLRADNDRD---VYLVFDYMETDLHAVIRANI-----LEPVHKQYVVY 116
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV---KGEPNI----- 114
Q+ + + Y+H+ G+ HRD+KP N+L+N H +K+ DFG ++ V + NI
Sbjct: 117 QLIKVIKYLHSG-GLLHRDMKPSNILLNAECH-VKVADFGLSRSFVNIRRVTNNIPLSIN 174
Query: 115 --------------SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGE 160
Y+ +R+YRAPE++ G+T+YT ID+WS GC+L E+L G+P+FPG
Sbjct: 175 ENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234
Query: 161 SGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH-------------PWHKIFQK 207
S ++QL II V+ P+ E+++ + + + +K W + K
Sbjct: 235 STMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLK 294
Query: 208 RMPP-----EAVDLVSRLLQYSPNLRSTALEALIHPFFDELRDPN 247
P EA+DL+ +LLQ++PN R +A +AL HPF +PN
Sbjct: 295 INPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPN 339
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 135/250 (54%), Gaps = 22/250 (8%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
L HPN++ L F + ++LV +++ + +IK + S + ++K Y
Sbjct: 69 LSHPNIIGLLDAFGHKSN-----ISLVFDFMETDLEVIIKDN---SLVLTPSHIKAYMLM 120
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSR 120
+ L Y+H + HRD+KP NLL++ LKL DFG AK G PN +Y + +R
Sbjct: 121 TLQGLEYLHQHW-ILHRDLKPNNLLLD-ENGVLKLADFGLAKSF--GSPNRAYXHQVVTR 176
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 180
+YRAPEL+FGA Y +D+W+ GC+LAELLL P PG+S +DQL I + LGTPT E+
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQ 236
Query: 181 I--KCMNPNYTEFK-FPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
C P+Y FK FP I P H IF + +DL+ L ++P R TA +AL
Sbjct: 237 WPDMCSLPDYVTFKSFPGI---PLHHIFSA-AGDDLLDLIQGLFLFNPCARITATQALKM 292
Query: 238 PFFDELRDPN 247
+F P
Sbjct: 293 KYFSNRPGPT 302
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 135/251 (53%), Gaps = 15/251 (5%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
++ + H NV+ L F + Y LV+ ++ + +++ + + L+Y
Sbjct: 77 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVY--- 133
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Q+ + L YIH+ GV HRD+KP NL VN +LK+ DFG A+ Y+ +
Sbjct: 134 ---QMLKGLKYIHSA-GVVHRDLKPGNLAVNEDC-ELKILDFGLARH--ADAEMTGYVVT 186
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
R+YRAPE+I Y +DIWS GC++AE+L G+ LF G+ +DQL +I+KV G P E
Sbjct: 187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 246
Query: 180 EIKCMNPNYTEF---KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
++ +N + PQ + ++F R P+A DL+ ++L+ + R TA +AL
Sbjct: 247 FVQKLNDKAAKSYIQSLPQTPRKDFTQLF-PRASPQAADLLEKMLELDVDKRLTAAQALT 305
Query: 237 HPFFDELRDPN 247
HPFF+ RDP
Sbjct: 306 HPFFEPFRDPE 316
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 138/251 (54%), Gaps = 14/251 (5%)
Query: 1 MRLLDHPNVVSLKHCFF-STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
++ L H NV+ L F +T+ +D + LV + ++ ++K SQ + +V+
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK-----SQALSDEHVQF 135
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
YQ+ R L YIH+ G+ HRD+KP N+ VN + +L++ DFG A+ E Y+ +
Sbjct: 136 LVYQLLRGLKYIHSA-GIIHRDLKPSNVAVNEDS-ELRILDFGLARQ--ADEEMTGYVAT 191
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++V+GTP+ E
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 251
Query: 180 EIKCMNPNYTEF---KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+ ++ + P + IF + P A+DL+ R+L + R +A EAL
Sbjct: 252 VLAKISSEHARTYIQSLPPMPQKDLSSIF-RGANPLAIDLLGRMLVLDSDQRVSAAEALA 310
Query: 237 HPFFDELRDPN 247
H +F + DP
Sbjct: 311 HAYFSQYHDPE 321
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 147 bits (370), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 138/251 (54%), Gaps = 16/251 (6%)
Query: 6 HPNVVSLKHCFFSTTEKDEL-YLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI 64
H N++++K T E + +VL+ + +H++I SQ + L +V+ + YQ+
Sbjct: 112 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS----SQPLTLEHVRYFLYQL 167
Query: 65 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-----ISYICS 119
R L Y+H+ V HRD+KP NLLVN + +LK+ DFG A+ L Y+ +
Sbjct: 168 LRGLKYMHSA-QVIHRDLKPSNLLVNENC-ELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
R+YRAPEL+ EYT AID+WS GC+ E+L + LFPG++ V QL I+ VLGTP+
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285
Query: 180 EIKCMNPNYTEF---KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
I+ + P + PW ++ +A+ L+ R+L++ P+ R +A AL
Sbjct: 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPG-ADRQALSLLGRMLRFEPSARISAAAALR 344
Query: 237 HPFFDELRDPN 247
HPF + DP+
Sbjct: 345 HPFLAKYHDPD 355
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 138/251 (54%), Gaps = 16/251 (6%)
Query: 6 HPNVVSLKHCFFSTTEKDEL-YLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI 64
H N++++K T E + +VL+ + +H++I SQ + L +V+ + YQ+
Sbjct: 113 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS----SQPLTLEHVRYFLYQL 168
Query: 65 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-----ISYICS 119
R L Y+H+ V HRD+KP NLLVN + +LK+ DFG A+ L Y+ +
Sbjct: 169 LRGLKYMHSA-QVIHRDLKPSNLLVNENC-ELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
R+YRAPEL+ EYT AID+WS GC+ E+L + LFPG++ V QL I+ VLGTP+
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 286
Query: 180 EIKCMNPNYTEF---KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
I+ + P + PW ++ +A+ L+ R+L++ P+ R +A AL
Sbjct: 287 VIQAVGAERVRAYIQSLPPRQPVPWETVYPG-ADRQALSLLGRMLRFEPSARISAAAALR 345
Query: 237 HPFFDELRDPN 247
HPF + DP+
Sbjct: 346 HPFLAKYHDPD 356
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 142/253 (56%), Gaps = 22/253 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L+HPN+V L + +++LYL V E+V + + + + +PLI K Y
Sbjct: 59 LKELNHPNIVKLLDVIHT---ENKLYL--VFEHVDQDLKKFMDASALTGIPLPLI--KSY 111
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---I 117
+Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y +
Sbjct: 112 LFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEV 167
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 227
Query: 178 REEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTALE 233
+ + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 228 ----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 283
Query: 234 ALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 284 ALAHPFFQDVTKP 296
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 144/260 (55%), Gaps = 36/260 (13%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E VH+ +K S +PL +K
Sbjct: 55 LKELNHPNIVKLLDVIHT---ENKLYL------VFEHVHQDLKTFMDASALTGIPLPLIK 105
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 106 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTH 161
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 176 PTREEIKCMNPNYTEF-----KFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPN 226
P + + P T FP+ W + F K +PP + L+S++L Y PN
Sbjct: 222 PD----EVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPN 272
Query: 227 LRSTALEALIHPFFDELRDP 246
R +A AL HPFF ++ P
Sbjct: 273 KRISAKAALAHPFFQDVTKP 292
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/260 (36%), Positives = 144/260 (55%), Gaps = 36/260 (13%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTH 162
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 163 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 176 PTREEIKCMNPNYTEF-----KFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPN 226
P + + P T FP+ W + F K +PP + L+S++L Y PN
Sbjct: 223 PD----EVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPN 273
Query: 227 LRSTALEALIHPFFDELRDP 246
R +A AL HPFF ++ P
Sbjct: 274 KRISAKAALAHPFFQDVTKP 293
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 143/257 (55%), Gaps = 18/257 (7%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L H N+V+L TEK L LV EY+ + + + + + + VKL+
Sbjct: 54 LKDLKHANIVTLHDIIH--TEKS---LTLVFEYLDKDLKQYLD---DCGNIINMHNVKLF 105
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---I 117
+Q+ R LAY H V HRD+KPQNLL+N +LKL DFG A+ K P +Y +
Sbjct: 106 LFQLLRGLAYCHRQ-KVLHRDLKPQNLLINERG-ELKLADFGLARA--KSIPTKTYDNEV 161
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ +YR P+++ G+T+Y+ ID+W GC+ E+ G+PLFPG + +QL I ++LGTPT
Sbjct: 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPT 221
Query: 178 REEIKCM--NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
E + N + + +P+ +A R+ + DL+++LLQ+ R +A +A+
Sbjct: 222 EETWPGILSNEEFKTYNYPKYRAEALLS-HAPRLDSDGADLLTKLLQFEGRNRISAEDAM 280
Query: 236 IHPFFDELRDPNTRLPN 252
HPFF L + +LP+
Sbjct: 281 KHPFFLSLGERIHKLPD 297
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 137/251 (54%), Gaps = 14/251 (5%)
Query: 1 MRLLDHPNVVSLKHCFF-STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
++ L H NV+ L F +T+ +D + LV + ++ ++K Q + +V+
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK-----CQALSDEHVQF 135
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
YQ+ R L YIH+ G+ HRD+KP N+ VN + +L++ DFG A+ E Y+ +
Sbjct: 136 LVYQLLRGLKYIHSA-GIIHRDLKPSNVAVNEDS-ELRILDFGLARQ--ADEEMTGYVAT 191
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++V+GTP+ E
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 251
Query: 180 EIKCMNPNYTEF---KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+ ++ + P + IF + P A+DL+ R+L + R +A EAL
Sbjct: 252 VLAKISSEHARTYIQSLPPMPQKDLSSIF-RGANPLAIDLLGRMLVLDSDQRVSAAEALA 310
Query: 237 HPFFDELRDPN 247
H +F + DP
Sbjct: 311 HAYFSQYHDPE 321
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 63 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 113
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 114 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTH 169
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 170 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 229
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 230 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 285
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 286 KAALAHPFFQDVTKP 300
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXH 162
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 223 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 279 KAALAHPFFQDVTKP 293
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/260 (36%), Positives = 144/260 (55%), Gaps = 36/260 (13%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXH 162
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 176 PTREEIKCMNPNYTEF-----KFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPN 226
P + + P T FP+ W + F K +PP + L+S++L Y PN
Sbjct: 223 PD----EVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPN 273
Query: 227 LRSTALEALIHPFFDELRDP 246
R +A AL HPFF ++ P
Sbjct: 274 KRISAKAALAHPFFQDVTKP 293
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 55 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 105
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 106 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXH 161
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 222 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 277
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 278 KAALAHPFFQDVTKP 292
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 58 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 108
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 109 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXH 164
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 224
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 225 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 280
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 281 KAALAHPFFQDVTKP 295
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 55 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 105
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 106 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTH 161
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 222 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 277
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 278 KAALAHPFFQDVTKP 292
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTH 162
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 223 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 279 KAALAHPFFQDVTKP 293
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 55 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 105
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 106 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTH 161
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 222 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 277
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 278 KAALAHPFFQDVTKP 292
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXH 162
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 223 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 279 KAALAHPFFQDVTKP 293
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTH 162
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 223 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 279 KAALAHPFFQDVTKP 293
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 55 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 105
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 106 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTH 161
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 222 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 277
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 278 KAALAHPFFQDVTKP 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 59 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 109
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 110 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXH 165
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 225
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 226 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 281
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 282 KAALAHPFFQDVTKP 296
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 58 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 108
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 109 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXH 164
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 224
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 225 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 280
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 281 KAALAHPFFQDVTKP 295
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 63 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 113
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 114 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTH 169
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 170 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 229
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 230 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 285
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 286 KAALAHPFFQDVTKP 300
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 55 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 105
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 106 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXH 161
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 222 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 277
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 278 KAALAHPFFQDVTKP 292
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 60 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 110
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 111 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXH 166
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 167 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 226
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 227 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 282
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 283 KAALAHPFFQDVTKP 297
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 57 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 107
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 108 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXH 163
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 223
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 224 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 279
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 280 KAALAHPFFQDVTKP 294
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 57 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 107
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 108 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXH 163
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 223
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 224 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 279
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 280 KAALAHPFFQDVTKP 294
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTH 162
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 223 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 279 KAALAHPFFQDVTKP 293
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 57 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 107
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 108 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTH 163
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 223
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 224 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 279
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 280 KAALAHPFFQDVTKP 294
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 60 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 110
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 111 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTH 166
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 167 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 226
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 227 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 282
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 283 KAALAHPFFQDVTKP 297
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 59 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 109
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 110 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXH 165
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 225
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 226 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 281
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 282 KAALAHPFFQDVTKP 296
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 59 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKTFMDASALTGIPLPLIK 109
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 110 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXH 165
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 225
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 226 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 281
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 282 KAALAHPFFQDVTKP 296
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + L++ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 107 SYLFQLLQGLSFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTH 162
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 223 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 279 KAALAHPFFQDVTKP 293
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 144 bits (362), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 58 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 108
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KP+NLL+N +KL DFG A+ G P +Y
Sbjct: 109 SYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXH 164
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 224
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 225 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 280
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 281 KAALAHPFFQDVTKP 295
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 144 bits (362), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 57 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 107
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KP+NLL+N +KL DFG A+ G P +Y
Sbjct: 108 SYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXH 163
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 223
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 224 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 279
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 280 KAALAHPFFQDVTKP 294
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 144 bits (362), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 136/251 (54%), Gaps = 14/251 (5%)
Query: 1 MRLLDHPNVVSLKHCFF-STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
++ L H NV+ L F +T+ +D + LV + ++ ++K Q + +V+
Sbjct: 73 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK-----CQALSDEHVQF 127
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
YQ+ R L YIH+ G+ HRD+KP N+ VN +L++ DFG A+ E Y+ +
Sbjct: 128 LVYQLLRGLKYIHSA-GIIHRDLKPSNVAVNEDC-ELRILDFGLARQ--ADEEMTGYVAT 183
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++V+GTP+ E
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 243
Query: 180 EIKCMNPNYTEF---KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+ ++ + P + IF + P A+DL+ R+L + R +A EAL
Sbjct: 244 VLAKISSEHARTYIQSLPPMPQKDLSSIF-RGANPLAIDLLGRMLVLDSDQRVSAAEALA 302
Query: 237 HPFFDELRDPN 247
H +F + DP
Sbjct: 303 HAYFSQYHDPE 313
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 142/255 (55%), Gaps = 26/255 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKDFMDASALTGIPLPLIK 106
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KP+NLL+N +KL DFG A+ G P +Y
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXH 162
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTA 231
P + + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 223 PD----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278
Query: 232 LEALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 279 KAALAHPFFQDVTKP 293
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 134/250 (53%), Gaps = 25/250 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L H N+V L + L LV E++ + + +++ + + K +
Sbjct: 54 LKELKHSNIVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLD---VCEGGLESVTAKSF 105
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---I 117
Q+ +AY H+ V HRD+KPQNLL+N +LK+ DFG A+ G P Y I
Sbjct: 106 LLQLLNGIAYCHDR-RVLHRDLKPQNLLIN-REGELKIADFGLARAF--GIPVRKYTHEI 161
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ +YRAP+++ G+ +Y+ IDIWS GC+ AE++ G PLFPG S DQL+ I ++LGTP
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPN 221
Query: 178 REEIKCMNPNYTEF-----KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAL 232
+ PN TE F + PW F K + +DL+S++L+ PN R TA
Sbjct: 222 SKNW----PNVTELPKYDPNFTVYEPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAK 276
Query: 233 EALIHPFFDE 242
+AL H +F E
Sbjct: 277 QALEHAYFKE 286
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 142/256 (55%), Gaps = 36/256 (14%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS--QRMPLIYVK 58
++ L+HPN+V L + +++LYL V E +H+ +K S +PL +K
Sbjct: 56 LKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIK 106
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 107 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXH 162
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 176 PTREEIKCMNPNYTEF-----KFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPN 226
P + + P T FP+ W + F K +PP + L+S++L Y PN
Sbjct: 223 PD----EVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPN 273
Query: 227 LRSTALEALIHPFFDE 242
R +A AL HPFF +
Sbjct: 274 KRISAKAALAHPFFQD 289
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 140/253 (55%), Gaps = 22/253 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L+HPN+V L + +++LYL V E++ + + +PLI K Y
Sbjct: 59 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLSMDLKDFMDASALTGIPLPLI--KSY 111
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---I 117
+Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y +
Sbjct: 112 LFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEV 167
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 227
Query: 178 REEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTALE 233
+ + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 228 ----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 283
Query: 234 ALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 284 ALAHPFFQDVTKP 296
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
++ + H NV+ L F T +E + LV + ++ ++K Q++ +V+
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQF 158
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +
Sbjct: 159 LIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVAT 214
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
R+YRAPE++ Y +DIWS GC++AELL G+ LFPG ++QL +I+++ GTP
Sbjct: 215 RWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPAS 274
Query: 180 EIKCM----NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
I M NY PQ+ + +F P AVDL+ ++L + R TA EAL
Sbjct: 275 VISRMPSHEARNYIN-SLPQMPKRNFADVFIG-ANPLAVDLLEKMLVLDTDKRITASEAL 332
Query: 236 IHPFFDELRDPN 247
HP+F + DP+
Sbjct: 333 AHPYFSQYHDPD 344
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 141/253 (55%), Gaps = 22/253 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L+HPN+V L + +++LYL V E++ + + + +PLI K Y
Sbjct: 57 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLSMDLKKFMDASALTGIPLPLI--KSY 109
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---I 117
+Q+ + LA+ H+ V HRD+KP+NLL+N +KL DFG A+ G P +Y +
Sbjct: 110 LFQLLQGLAFCHSH-RVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEV 165
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 225
Query: 178 REEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTALE 233
+ + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 226 ----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 281
Query: 234 ALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 282 ALAHPFFQDVTKP 294
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 140/253 (55%), Gaps = 22/253 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L+HPN+V L + +++LYL V E++ + + +PLI K Y
Sbjct: 58 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLSMDLKDFMDASALTGIPLPLI--KSY 110
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---I 117
+Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y +
Sbjct: 111 LFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEV 166
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP
Sbjct: 167 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 226
Query: 178 REEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTALE 233
+ + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 227 ----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 282
Query: 234 ALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 283 ALAHPFFQDVTKP 295
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 134/250 (53%), Gaps = 25/250 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L H N+V L + L LV E++ + + +++ + + K +
Sbjct: 54 LKELKHSNIVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLD---VCEGGLESVTAKSF 105
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---I 117
Q+ +AY H+ V HRD+KPQNLL+N +LK+ DFG A+ G P Y +
Sbjct: 106 LLQLLNGIAYCHDR-RVLHRDLKPQNLLIN-REGELKIADFGLARAF--GIPVRKYTHEV 161
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ +YRAP+++ G+ +Y+ IDIWS GC+ AE++ G PLFPG S DQL+ I ++LGTP
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPN 221
Query: 178 REEIKCMNPNYTEF-----KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAL 232
+ PN TE F + PW F K + +DL+S++L+ PN R TA
Sbjct: 222 SKNW----PNVTELPKYDPNFTVYEPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAK 276
Query: 233 EALIHPFFDE 242
+AL H +F E
Sbjct: 277 QALEHAYFKE 286
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 141/253 (55%), Gaps = 22/253 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L+HPN+V L + +++LYL V E++ + + + +PLI K Y
Sbjct: 59 LKELNHPNIVKLLDVIHT---ENKLYL--VFEFLSMDLKKFMDASALTGIPLPLI--KSY 111
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---I 117
+Q+ + LA+ H+ V HRD+KP+NLL+N +KL DFG A+ G P +Y +
Sbjct: 112 LFQLLQGLAFCHSH-RVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEV 167
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 227
Query: 178 REEIKCMNPNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTALE 233
+ + P T + W + F K +PP + L+S++L Y PN R +A
Sbjct: 228 ----EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 283
Query: 234 ALIHPFFDELRDP 246
AL HPFF ++ P
Sbjct: 284 ALAHPFFQDVTKP 296
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 134/250 (53%), Gaps = 25/250 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L H N+V L + L LV E++ + + +++ + + K +
Sbjct: 54 LKELKHSNIVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLD---VCEGGLESVTAKSF 105
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---I 117
Q+ +AY H+ V HRD+KPQNLL+N +LK+ DFG A+ G P Y +
Sbjct: 106 LLQLLNGIAYCHDR-RVLHRDLKPQNLLIN-REGELKIADFGLARAF--GIPVRKYTHEV 161
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ +YRAP+++ G+ +Y+ IDIWS GC+ AE++ G PLFPG S DQL+ I ++LGTP
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPN 221
Query: 178 REEIKCMNPNYTEF-----KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAL 232
+ PN TE F + PW F K + +DL+S++L+ PN R TA
Sbjct: 222 SKNW----PNVTELPKYDPNFTVYEPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAK 276
Query: 233 EALIHPFFDE 242
+AL H +F E
Sbjct: 277 QALEHAYFKE 286
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 140/254 (55%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ A Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 140/254 (55%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K SQ++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----SQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN + +LK+ DFG + + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDS-ELKILDFGLCRH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 141 bits (355), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 140/254 (55%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 133
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN + +LK+ DFG A+ + Y+
Sbjct: 134 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDS-ELKILDFGLARH--TDDEMTGYV 189
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 250 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 307
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 308 ALAHAYFAQYHDPD 321
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 141 bits (355), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 140/254 (55%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 129
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN + +LK+ DFG A+ + Y+
Sbjct: 130 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDS-ELKILDFGLARH--TDDEMTGYV 185
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 246 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 303
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 304 ALAHAYFAQYHDPD 317
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----XQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 140 bits (353), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 138
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 139 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYV 194
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 254
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 255 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 312
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 313 ALAHAYFAQYHDPD 326
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 132
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 133 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYV 188
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 249 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 306
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 307 ALAHAYFAQYHDPD 320
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 132
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 133 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYV 188
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 249 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 306
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 307 ALAHAYFAQYHDPD 320
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----XQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 134
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 135 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TADEMTGYV 190
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 251 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 308
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 309 ALAHAYFAQYHDPD 322
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 134
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 135 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TADEMTGYV 190
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 251 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 308
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 309 ALAHAYFAQYHDPD 322
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 134
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 135 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TADEMTGYV 190
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 251 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 308
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 309 ALAHAYFAQYHDPD 322
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 133
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 134 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 189
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 250 AELLKKISSESARNYIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 307
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 308 ALAHAYFAQYHDPD 321
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 133
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 134 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 189
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 250 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 307
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 308 ALAHAYFAQYHDPD 321
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 139
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 140 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 195
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 256 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 313
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 314 ALAHAYFAQYHDPD 327
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 138
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 139 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 194
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 254
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 255 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 312
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 313 ALAHAYFAQYHDPD 326
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 139
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 140 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 195
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 256 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 313
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 314 ALAHAYFAQYHDPD 327
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 133
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 134 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 189
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 250 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 307
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 308 ALAHAYFAQYHDPD 321
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 147
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 148 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 203
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 264 AELLKKISSESARNYIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 321
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 322 ALAHAYFAQYHDPD 335
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 123
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 124 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 179
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 240 AELLKKISSESARNYIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 297
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 298 ALAHAYFAQYHDPD 311
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 125
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 126 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 181
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 241
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 242 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 299
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 300 ALAHAYFAQYHDPD 313
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 132
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 133 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 188
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 249 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 306
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 307 ALAHAYFAQYHDPD 320
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 150
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 151 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 206
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 266
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 267 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 324
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 325 ALAHAYFAQYHDPD 338
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 124
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 125 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 180
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 240
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 241 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 298
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 299 ALAHAYFAQYHDPD 312
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 147
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 148 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 203
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 264 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 321
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 322 ALAHAYFAQYHDPD 335
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 146
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 147 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 202
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 262
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 263 AELLKKISSESARNYIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 320
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 321 ALAHAYFAQYHDPD 334
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 85 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 137
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 138 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 193
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 194 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 253
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 254 AELLKKISSESARNYIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 311
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 312 ALAHAYFAQYHDPD 325
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 139
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 140 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 195
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 256 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 313
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 314 ALAHAYFAQYHDPD 327
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 124
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 125 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 180
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 240
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 241 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 298
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 299 ALAHAYFAQYHDPD 312
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 129
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 130 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 185
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 246 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 303
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 304 ALAHAYFAQYHDPD 317
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 123
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 124 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 179
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 240 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 297
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 298 ALAHAYFAQYHDPD 311
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 134
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 135 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 190
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 251 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 308
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 309 ALAHAYFAQYHDPD 322
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 146
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 147 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 202
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 262
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 263 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 320
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 321 ALAHAYFAQYHDPD 334
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 150
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 151 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMXGYV 206
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 266
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 267 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 324
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 325 ALAHAYFAQYHDPD 338
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 132
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 133 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 188
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 249 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 306
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 307 ALAHAYFAQYHDPD 320
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 74 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 126
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 127 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 182
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 183 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 242
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 243 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 300
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 301 ALAHAYFAQYHDPD 314
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 129
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 130 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 185
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 246 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 303
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 304 ALAHAYFAQYHDPD 317
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 129/245 (52%), Gaps = 16/245 (6%)
Query: 6 HPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI 64
H NV+ L F D+ LV+ ++ + +++KH R ++ YQ+
Sbjct: 83 HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDR-----IQFLVYQM 137
Query: 65 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRA 124
+ L YIH G+ HRD+KP NL VN +LK+ DFG A+ + +R+YRA
Sbjct: 138 LKGLRYIH-AAGIIHRDLKPGNLAVNEDC-ELKILDFGLARQ--ADSEMXGXVVTRWYRA 193
Query: 125 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 184
PE+I YT +DIWS GC++AE++ G+ LF G +DQL EI+KV GTP E ++ +
Sbjct: 194 PEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL 253
Query: 185 NP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
NY + P+++ + I P AV+L+ ++L R TA EAL HP+F
Sbjct: 254 QSDEAKNYMK-GLPELEKKDFASILTN-ASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
Query: 241 DELRD 245
+ L D
Sbjct: 312 ESLHD 316
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 129
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 130 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 185
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 246 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 303
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 304 ALAHAYFAQYHDPD 317
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ D+G A+ + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDYGLARH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 123
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + ++
Sbjct: 124 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMAGFV 179
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 240 AELLKKISSESARNYIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 297
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 298 ALAHAYFAQYHDPD 311
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + ++
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMAGFV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + ++
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMAGFV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 138/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K ++ +V
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CAKLTDDHV 123
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + Y+
Sbjct: 124 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYV 179
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 240 AELLKKISSESARNYIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 297
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 298 ALAHAYFAQYHDPD 311
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 138/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ FG A+ + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILGFGLARH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 138/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + +
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGXV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 138/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ D G A+ + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDAGLARH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 138/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 147
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DFG A+ + +
Sbjct: 148 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMXGXV 203
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 264 AELLKKISSESARNYIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 321
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 322 ALAHAYFAQYHDPD 335
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 138/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ D G A+ + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDGGLARH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 138/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ D G A+ + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDRGLARH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 138/254 (54%), Gaps = 20/254 (7%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
++ + H NV+ L F S E +++YL V + ++ ++K Q++ +V
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHV 127
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ YQI R L YIH+ + HRD+KP NL VN +LK+ DF A+ + Y+
Sbjct: 128 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFYLARH--TDDEMTGYV 183
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+R+YRAPE++ Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 178 REEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
E +K ++ NY + Q+ + +F P AVDL+ ++L + R TA +
Sbjct: 244 AELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 234 ALIHPFFDELRDPN 247
AL H +F + DP+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 131/244 (53%), Gaps = 15/244 (6%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L H N+V+L +K YL V E+V H ++ + V+ Y
Sbjct: 78 LKQLRHENLVNLLEV---CKKKKRWYL--VFEFVD---HTILDDLELFPNGLDYQVVQKY 129
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVK-GEPNISYICS 119
+QI + + H+ + HRDIKP+N+LV+ + +KLCDFG A+ L GE + +
Sbjct: 130 LFQIINGIGFCHSH-NIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYDDEVAT 187
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT--PT 177
R+YRAPEL+ G +Y A+D+W+ GC++ E+ +G+PLFPG+S +DQL I+ LG P
Sbjct: 188 RWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPR 247
Query: 178 REEIKCMNPNYTEFKFPQIKA-HPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+E+ NP + + P+IK P + + K + +DL + L P+ R E L
Sbjct: 248 HQELFNKNPVFAGVRLPEIKEREPLERRYPK-LSEVVIDLAKKCLHIDPDKRPFCAELLH 306
Query: 237 HPFF 240
H FF
Sbjct: 307 HDFF 310
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 135/255 (52%), Gaps = 17/255 (6%)
Query: 1 MRLLDH---PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI-- 55
+RLL+H PN++ L+ F E L LV E + + +VI QR+ +
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH-----DQRIVISPQ 134
Query: 56 YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS 115
+++ + Y I L +H GV HRD+ P N+L+ + + +CDF A+
Sbjct: 135 HIQYFMYHILLGLHVLHEA-GVVHRDLHPGNILL-ADNNDITICDFNLAREDTADANKTH 192
Query: 116 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
Y+ R+YRAPEL+ +T +D+WSAGCV+AE+ + LF G + +QL +I++V+GT
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT 252
Query: 176 PTREEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTA 231
P E++ + +Y + A W + P A+DL++++L+++P R +
Sbjct: 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT-ADPVALDLIAKMLEFNPQRRIST 311
Query: 232 LEALIHPFFDELRDP 246
+AL HP+F+ L DP
Sbjct: 312 EQALRHPYFESLFDP 326
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 135/255 (52%), Gaps = 17/255 (6%)
Query: 1 MRLLDH---PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI-- 55
+RLL+H PN++ L+ F E L LV E + + +VI QR+ +
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH-----DQRIVISPQ 134
Query: 56 YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS 115
+++ + Y I L +H GV HRD+ P N+L+ + + +CDF A+
Sbjct: 135 HIQYFMYHILLGLHVLHEA-GVVHRDLHPGNILL-ADNNDITICDFNLAREDTADANKTH 192
Query: 116 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
Y+ R+YRAPEL+ +T +D+WSAGCV+AE+ + LF G + +QL +I++V+GT
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT 252
Query: 176 PTREEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTA 231
P E++ + +Y + A W + P A+DL++++L+++P R +
Sbjct: 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT-ADPVALDLIAKMLEFNPQRRIST 311
Query: 232 LEALIHPFFDELRDP 246
+AL HP+F+ L DP
Sbjct: 312 EQALRHPYFESLFDP 326
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 140/256 (54%), Gaps = 27/256 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHY--KMSQRMPLIYVK 58
M+ L H N+V L + E L LV E++ + + + + + L VK
Sbjct: 57 MKELKHENIVRLYDVIHT-----ENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVK 111
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 116
+ +Q+ + LA+ H + HRD+KPQNLL+N QLKL DFG A+ G P ++
Sbjct: 112 YFQWQLLQGLAFCHEN-KILHRDLKPQNLLINKRG-QLKLGDFGLARAF--GIPVNTFSS 167
Query: 117 -ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + +YRAP+++ G+ Y+ +IDIWS GC+LAE++ G+PLFPG + +QL I ++GT
Sbjct: 168 EVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGT 227
Query: 176 PTREEIKCMNPNYTEF-KF-PQIKAHPWHKIFQKRMP-------PEAVDLVSRLLQYSPN 226
P + + P+ T+ K+ P I+ P + Q P +D + LLQ +P+
Sbjct: 228 PN----ESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPD 283
Query: 227 LRSTALEALIHPFFDE 242
+R +A +AL HP+F E
Sbjct: 284 MRLSAKQALHHPWFAE 299
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 130 bits (327), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 133/256 (51%), Gaps = 28/256 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L H N+V L S + L LV E+ + + K+ + + VK +
Sbjct: 55 LKELKHKNIVRLHDVLHSDKK-----LTLVFEFCDQDLK---KYFDSCNGDLDPEIVKSF 106
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---I 117
+Q+ + L + H+ V HRD+KPQNLL+N +LKL +FG A+ G P Y +
Sbjct: 107 LFQLLKGLGFCHSR-NVLHRDLKPQNLLIN-RNGELKLANFGLARAF--GIPVRCYSAEV 162
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTP 176
+ +YR P+++FGA Y+ +ID+WSAGC+ AEL G+PLFPG DQL I ++LGTP
Sbjct: 163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 222
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQK------RMPPEAVDLVSRLLQYSPNLRST 230
T E+ M K P K +P + ++ DL+ LL+ +P R +
Sbjct: 223 TEEQWPSMT------KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS 276
Query: 231 ALEALIHPFFDELRDP 246
A EAL HP+F + P
Sbjct: 277 AEEALQHPYFSDFCPP 292
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 136/252 (53%), Gaps = 21/252 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR-MPLIYVKL 59
++ L HPN+V+L F + + L+LV EY TV H QR +P VK
Sbjct: 56 LKQLKHPNLVNLLEVF-----RRKRRLHLVFEYCDHTV----LHELDRYQRGVPEHLVKS 106
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY--- 116
+Q +A+ + H HRD+KP+N+L+ H+ +KLCDFG A++L P+ Y
Sbjct: 107 ITWQTLQAVNFCHKH-NCIHRDVKPENILITKHS-VIKLCDFGFARLLTG--PSDYYDDE 162
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT- 175
+ +R+YR+PEL+ G T+Y +D+W+ GCV AELL G PL+PG+S VDQL I K LG
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDL 222
Query: 176 -PTREEIKCMNPNYTEFKFPQIK-AHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
P +++ N ++ K P + P F P A+ L+ L P R T +
Sbjct: 223 IPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYP-ALGLLKGCLHMDPTERLTCEQ 281
Query: 234 ALIHPFFDELRD 245
L HP+F+ +R+
Sbjct: 282 LLHHPYFENIRE 293
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 134/257 (52%), Gaps = 31/257 (12%)
Query: 3 LLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L+ PN+V L K +L+ EYV T +V + + ++ Y Y
Sbjct: 82 LMGGPNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKV------LYPTLTDYDIRYYIY 132
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ +AL Y H+ G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY+
Sbjct: 133 ELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEI 181
+ PEL+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD----- 246
Query: 182 KCMNPNYTEFKF---PQIKA-------HPWHKIF----QKRMPPEAVDLVSRLLQYSPNL 227
+N +++ PQ++A PW K Q + PEA+D + +LL+Y
Sbjct: 247 -GLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQE 305
Query: 228 RSTALEALIHPFFDELR 244
R TALEA+ HP+F ++R
Sbjct: 306 RLTALEAMTHPYFQQVR 322
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 131/253 (51%), Gaps = 28/253 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L H N+V L S + L LV E+ + + K+ + + VK +
Sbjct: 55 LKELKHKNIVRLHDVLHSDKK-----LTLVFEFCDQDLK---KYFDSCNGDLDPEIVKSF 106
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---I 117
+Q+ + L + H+ V HRD+KPQNLL+N +LKL DFG A+ G P Y +
Sbjct: 107 LFQLLKGLGFCHSR-NVLHRDLKPQNLLIN-RNGELKLADFGLARAF--GIPVRCYSAEV 162
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTP 176
+ +YR P+++FGA Y+ +ID+WSAGC+ AEL +PLFPG DQL I ++LGTP
Sbjct: 163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTP 222
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQK------RMPPEAVDLVSRLLQYSPNLRST 230
T E+ M K P K +P + ++ DL+ LL+ +P R +
Sbjct: 223 TEEQWPSMT------KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS 276
Query: 231 ALEALIHPFFDEL 243
A EAL HP+F +
Sbjct: 277 AEEALQHPYFSDF 289
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 126/232 (54%), Gaps = 28/232 (12%)
Query: 28 NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNL 87
+L+ EYV T +V + + ++ Y Y++ +AL Y H+ G+ HRD+KP N+
Sbjct: 125 SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNV 177
Query: 88 LVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVL 147
+++ +L+L D+G A+ G+ + SRY++ PEL+ +Y ++D+WS GC+
Sbjct: 178 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 237
Query: 148 AELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKA----- 198
A ++ +P F G DQLV+I KVLGT +N +++ PQ++A
Sbjct: 238 AGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLNAYLNKYRIELDPQLEALVGRH 291
Query: 199 --HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELR 244
PW K Q + PEA+D + +LL+Y R TALEA+ HP+F ++R
Sbjct: 292 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 343
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 126/232 (54%), Gaps = 28/232 (12%)
Query: 28 NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNL 87
+L+ EYV T +V + + ++ Y Y++ +AL Y H+ G+ HRD+KP N+
Sbjct: 104 SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNV 156
Query: 88 LVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVL 147
+++ +L+L D+G A+ G+ + SRY++ PEL+ +Y ++D+WS GC+
Sbjct: 157 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 216
Query: 148 AELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKA----- 198
A ++ +P F G DQLV+I KVLGT +N +++ PQ++A
Sbjct: 217 AGMIFRKEPFFYGHDNHDQLVKIAKVLGTD------GLNVYLNKYRIELDPQLEALVGRH 270
Query: 199 --HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELR 244
PW K Q + PEA+D + +LL+Y R TALEA+ HP+F ++R
Sbjct: 271 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 126/232 (54%), Gaps = 28/232 (12%)
Query: 28 NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNL 87
+L+ EYV T +V + + ++ Y Y++ +AL Y H+ G+ HRD+KP N+
Sbjct: 104 SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNV 156
Query: 88 LVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVL 147
+++ +L+L D+G A+ G+ + SRY++ PEL+ +Y ++D+WS GC+
Sbjct: 157 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 216
Query: 148 AELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKA----- 198
A ++ +P F G DQLV+I KVLGT +N +++ PQ++A
Sbjct: 217 AGMIFRKEPFFYGHDNHDQLVKIAKVLGTD------GLNVYLNKYRIELDPQLEALVGRH 270
Query: 199 --HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELR 244
PW K Q + PEA+D + +LL+Y R TALEA+ HP+F ++R
Sbjct: 271 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 140/267 (52%), Gaps = 35/267 (13%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIK---HHYKMSQRMPL 54
M++++H N++ L + F S E ++Y+ V+E + + +VI+ H +MS
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLSQVIQMELDHERMS----- 129
Query: 55 IYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 114
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+
Sbjct: 130 ----YLLYQMLVGIKHLHSA-GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMT 183
Query: 115 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
Y+ +RYYRAPE+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LG
Sbjct: 184 PYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 175 TPTREEIKCMNP---NYTEFKFPQIKAHPWHKIF-----------QKRMPPEAVDLVSRL 220
TP+ E +K + P Y E + P+ + + K+F K +A DL+S++
Sbjct: 243 TPSPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 221 LQYSPNLRSTALEALIHPFFDELRDPN 247
L + R + EAL HP+ + DP+
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPS 328
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 126/232 (54%), Gaps = 28/232 (12%)
Query: 28 NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNL 87
+L+ EYV T +V + + ++ Y Y++ +AL Y H+ G+ HRD+KP N+
Sbjct: 104 SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNV 156
Query: 88 LVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVL 147
+++ +L+L D+G A+ G+ + SRY++ PEL+ +Y ++D+WS GC+
Sbjct: 157 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 216
Query: 148 AELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKA----- 198
A ++ +P F G DQLV+I KVLGT +N +++ PQ++A
Sbjct: 217 AGMIFRKEPFFYGHDNHDQLVKIAKVLGTD------GLNVYLNKYRIELDPQLEALVGRH 270
Query: 199 --HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELR 244
PW K Q + PEA+D + +LL+Y R TALEA+ HP+F ++R
Sbjct: 271 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 126/232 (54%), Gaps = 28/232 (12%)
Query: 28 NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNL 87
+L+ EYV T +V + + ++ Y Y++ +AL Y H+ G+ HRD+KP N+
Sbjct: 105 SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNV 157
Query: 88 LVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVL 147
+++ +L+L D+G A+ G+ + SRY++ PEL+ +Y ++D+WS GC+
Sbjct: 158 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 217
Query: 148 AELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKA----- 198
A ++ +P F G DQLV+I KVLGT +N +++ PQ++A
Sbjct: 218 AGMIFRKEPFFYGHDNHDQLVKIAKVLGTD------GLNVYLNKYRIELDPQLEALVGRH 271
Query: 199 --HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELR 244
PW K Q + PEA+D + +LL+Y R TALEA+ HP+F ++R
Sbjct: 272 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 323
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 126/232 (54%), Gaps = 28/232 (12%)
Query: 28 NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNL 87
+L+ EYV T +V + + ++ Y Y++ +AL Y H+ G+ HRD+KP N+
Sbjct: 105 SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNV 157
Query: 88 LVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVL 147
+++ +L+L D+G A+ G+ + SRY++ PEL+ +Y ++D+WS GC+
Sbjct: 158 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 217
Query: 148 AELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKA----- 198
A ++ +P F G DQLV+I KVLGT +N +++ PQ++A
Sbjct: 218 AGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRH 271
Query: 199 --HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELR 244
PW K Q + PEA+D + +LL+Y R TALEA+ HP+F ++R
Sbjct: 272 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 323
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 126/232 (54%), Gaps = 28/232 (12%)
Query: 28 NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNL 87
+L+ EYV T +V + + ++ Y Y++ +AL Y H+ G+ HRD+KP N+
Sbjct: 104 SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNV 156
Query: 88 LVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVL 147
+++ +L+L D+G A+ G+ + SRY++ PEL+ +Y ++D+WS GC+
Sbjct: 157 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 216
Query: 148 AELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKA----- 198
A ++ +P F G DQLV+I KVLGT +N +++ PQ++A
Sbjct: 217 AGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRH 270
Query: 199 --HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELR 244
PW K Q + PEA+D + +LL+Y R TALEA+ HP+F ++R
Sbjct: 271 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 126/232 (54%), Gaps = 28/232 (12%)
Query: 28 NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNL 87
+L+ EYV T +V + + ++ Y Y++ +AL Y H+ G+ HRD+KP N+
Sbjct: 104 SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNV 156
Query: 88 LVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVL 147
+++ +L+L D+G A+ G+ + SRY++ PEL+ +Y ++D+WS GC+
Sbjct: 157 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 216
Query: 148 AELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKA----- 198
A ++ +P F G DQLV+I KVLGT +N +++ PQ++A
Sbjct: 217 AGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRH 270
Query: 199 --HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELR 244
PW K Q + PEA+D + +LL+Y R TALEA+ HP+F ++R
Sbjct: 271 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 127/243 (52%), Gaps = 28/243 (11%)
Query: 28 NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNL 87
+L+ EYV T +V + + ++ Y Y++ +AL Y H+ G+ HRD+KP N+
Sbjct: 106 SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLKALDYCHSQ-GIMHRDVKPHNV 158
Query: 88 LVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVL 147
+++ +L+L D+G A+ G+ + SRY++ PEL+ +Y ++D+WS GC+
Sbjct: 159 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 218
Query: 148 AELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKA----- 198
A ++ +P F G DQLV+I KVLGT +N +++ PQ++A
Sbjct: 219 AGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRH 272
Query: 199 --HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELRDPNTRLPN 252
PW K Q + PEA+D + +LL+Y R TALEA+ HP+F ++R
Sbjct: 273 SRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAENSRTR 332
Query: 253 GRF 255
F
Sbjct: 333 AEF 335
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 140/266 (52%), Gaps = 44/266 (16%)
Query: 1 MRLLDHPNVV-----------SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS 49
+R LDH N+V L S TE + +Y+ V EY+ + V+
Sbjct: 62 IRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYI--VQEYMETDLANVL------- 112
Query: 50 QRMPLI--YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL 107
++ PL+ + +L+ YQ+ R L YIH+ V HRD+KP NL +N LK+ DFG A+++
Sbjct: 113 EQGPLLEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
Query: 108 VKGEPNISY-------ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGE 160
+P+ S+ + +++YR+P L+ YT AID+W+AGC+ AE+L G+ LF G
Sbjct: 172 ---DPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA 228
Query: 161 SGVDQL---VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPP---EAV 214
++Q+ +E I V+ R+E+ + P Y + HK + +P EAV
Sbjct: 229 HELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEP-----HKPLTQLLPGISREAV 283
Query: 215 DLVSRLLQYSPNLRSTALEALIHPFF 240
D + ++L +SP R TA EAL HP+
Sbjct: 284 DFLEQILTFSPMDRLTAEEALSHPYM 309
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 140/267 (52%), Gaps = 35/267 (13%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIK---HHYKMSQRMPL 54
M++++H N++ L + F S E ++Y+ V+E + + +VI+ H +MS
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLSQVIQMELDHERMS----- 129
Query: 55 IYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 114
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+
Sbjct: 130 ----YLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMT 183
Query: 115 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
Y+ +RYYRAPE+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LG
Sbjct: 184 PYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 175 TPTREEIKCMNP---NYTEFKFPQIKAHPWHKIF-----------QKRMPPEAVDLVSRL 220
TP+ E +K + P Y E + P+ + + K+F K +A DL+S++
Sbjct: 243 TPSPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 221 LQYSPNLRSTALEALIHPFFDELRDPN 247
L + R + EAL HP+ + DP+
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPS 328
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 139/267 (52%), Gaps = 35/267 (13%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIK---HHYKMSQRMPL 54
M+ ++H N++ L + F S E ++Y+ V+E + + +VI+ H +MS
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLSQVIQMELDHERMS----- 129
Query: 55 IYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 114
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+
Sbjct: 130 ----YLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMT 183
Query: 115 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
Y+ +RYYRAPE+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LG
Sbjct: 184 PYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 175 TPTREEIKCMNP---NYTEFKFPQIKAHPWHKIF-----------QKRMPPEAVDLVSRL 220
TP+ E +K + P Y E + P+ + + K+F K +A DL+S++
Sbjct: 243 TPSPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 221 LQYSPNLRSTALEALIHPFFDELRDPN 247
L + R + EAL HP+ + DP+
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPS 328
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 139/267 (52%), Gaps = 35/267 (13%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIK---HHYKMSQRMPL 54
M++++H N++ L + F S E ++Y+ V+E + + +VI+ H +MS
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLSQVIQMELDHERMS----- 129
Query: 55 IYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 114
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+
Sbjct: 130 ----YLLYQMLVGIKHLHSA-GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMT 183
Query: 115 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
Y+ +RYYRAPE+I G Y +DIWS G ++ E++ G LFPG +DQ ++I+ LG
Sbjct: 184 PYVVTRYYRAPEVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 175 TPTREEIKCMNP---NYTEFKFPQIKAHPWHKIF-----------QKRMPPEAVDLVSRL 220
TP+ E +K + P Y E + P+ + + K+F K +A DL+S++
Sbjct: 243 TPSPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 221 LQYSPNLRSTALEALIHPFFDELRDPN 247
L + R + EAL HP+ + DP+
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPS 328
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 135/260 (51%), Gaps = 23/260 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
++ ++H N++SL + F +E + LV+E + + +VI H +RM +
Sbjct: 77 LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-HMELDHERMSYL---- 131
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +
Sbjct: 132 -LYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTACTNFMMTPYVVT 188
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPE+I G Y A +DIWS GC++ EL+ G +F G +DQ ++I+ LGTP+ E
Sbjct: 189 RYYRAPEVILGMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAE 247
Query: 180 EIKCMNP---NYTEF--KFPQIKAH--------PWHKIFQKRMPPEAVDLVSRLLQYSPN 226
+ + P NY E K+P IK P K +A DL+S++L P+
Sbjct: 248 FMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPD 307
Query: 227 LRSTALEALIHPFFDELRDP 246
R + EAL HP+ DP
Sbjct: 308 KRISVDEALRHPYITVWYDP 327
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 139/267 (52%), Gaps = 35/267 (13%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIK---HHYKMSQRMPL 54
M+ ++H N++ L + F S E ++Y+ V+E + + +VI+ H +MS
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLSQVIQMELDHERMS----- 129
Query: 55 IYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 114
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+
Sbjct: 130 ----YLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMT 183
Query: 115 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
Y+ +RYYRAPE+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LG
Sbjct: 184 PYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 175 TPTREEIKCMNP---NYTEFKFPQIKAHPWHKIF-----------QKRMPPEAVDLVSRL 220
TP+ E +K + P Y E + P+ + + K+F K +A DL+S++
Sbjct: 243 TPSPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 221 LQYSPNLRSTALEALIHPFFDELRDPN 247
L + R + EAL HP+ + DP+
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPS 328
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 139/267 (52%), Gaps = 35/267 (13%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIK---HHYKMSQRMPL 54
M++++H N++ L + F S E ++Y+ V+E + + +VI+ H +MS
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLSQVIQMELDHERMS----- 129
Query: 55 IYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 114
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+
Sbjct: 130 ----YLLYQMLVGIKHLHSA-GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMT 183
Query: 115 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
Y+ +RYYRAPE+I G Y +DIWS G ++ E++ G LFPG +DQ ++I+ LG
Sbjct: 184 PYVVTRYYRAPEVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 175 TPTREEIKCMNP---NYTEFKFPQIKAHPWHKIF-----------QKRMPPEAVDLVSRL 220
TP+ E +K + P Y E + P+ + + K+F K +A DL+S++
Sbjct: 243 TPSPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 221 LQYSPNLRSTALEALIHPFFDELRDPN 247
L + R + EAL HP+ + DP+
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPS 328
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 29/263 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIY 56
M+ ++H N++SL + F +E + LV+E + + +VI+ H +MS
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS------- 129
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y
Sbjct: 130 --YLLYQMLXGIKHLHSA-GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPY 185
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ +RYYRAPE+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 177 TREEIKCMNP---NYTE-------FKFPQI---KAHPWHKIFQKRMPPEAVDLVSRLLQY 223
E +K + P NY E FP++ P K +A DL+S++L
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 224 SPNLRSTALEALIHPFFDELRDP 246
P R + +AL HP+ + DP
Sbjct: 305 DPAKRISVDDALQHPYINVWYDP 327
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 29/263 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIY 56
M+ ++H N++SL + F +E + LV+E + + +VI+ H +MS
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS------- 122
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y
Sbjct: 123 --YLLYQMLXGIKHLHSA-GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPY 178
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ +RYYRAPE+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP
Sbjct: 179 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 177 TREEIKCMNP---NYTE-------FKFPQI---KAHPWHKIFQKRMPPEAVDLVSRLLQY 223
E +K + P NY E FP++ P K +A DL+S++L
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 297
Query: 224 SPNLRSTALEALIHPFFDELRDP 246
P R + +AL HP+ + DP
Sbjct: 298 DPAKRISVDDALQHPYINVWYDP 320
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 29/263 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIY 56
M+ ++H N++SL + F +E + LV+E + + +VI+ H +MS
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS------- 129
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y
Sbjct: 130 --YLLYQMLXGIKHLHSA-GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPY 185
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ +RYYRAPE+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 177 TREEIKCMNP---NYTE-------FKFPQI---KAHPWHKIFQKRMPPEAVDLVSRLLQY 223
E +K + P NY E FP++ P K +A DL+S++L
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 224 SPNLRSTALEALIHPFFDELRDP 246
P R + +AL HP+ + DP
Sbjct: 305 DPAKRISVDDALQHPYINVWYDP 327
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 138/263 (52%), Gaps = 13/263 (4%)
Query: 1 MRLLDHPNVVSL-KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQ-RMPLIYVK 58
+ +HPNVV L C S T++ E L LV E+V + + + K+ + +P +K
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLD---KVPEPGVPTETIK 123
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
+Q+ R L ++H+ V HRD+KPQN+LV + Q+KL DFG A++ S +
Sbjct: 124 DMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALTSVVV 181
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+ +YRAPE++ ++ Y +D+WS GC+ AE+ +PLF G S VDQL +I+ V+G P
Sbjct: 182 TLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240
Query: 179 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHP 238
E+ + F A P K F + DL+ + L ++P R +A AL HP
Sbjct: 241 EDWP-RDVALPRQAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 298
Query: 239 FFDELRDPNTRLPNGRFLPPLFN 261
+F +L L + LPP N
Sbjct: 299 YFQDLERCKENLDS--HLPPSQN 319
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 139/267 (52%), Gaps = 35/267 (13%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIK---HHYKMSQRMPL 54
M+ ++H N++ L + F S E ++Y+ V+E + + +VI+ H +MS
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLCQVIQMELDHERMS----- 129
Query: 55 IYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 114
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+
Sbjct: 130 ----YLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMT 183
Query: 115 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
Y+ +RYYRAPE+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LG
Sbjct: 184 PYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 175 TPTREEIKCMNP---NYTEFKFPQIKAHPWHKIF-----------QKRMPPEAVDLVSRL 220
TP+ E +K + P Y E + P+ + + K+F K +A DL+S++
Sbjct: 243 TPSPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 221 LQYSPNLRSTALEALIHPFFDELRDPN 247
L + R + EAL HP+ + DP+
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPS 328
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 132/245 (53%), Gaps = 11/245 (4%)
Query: 1 MRLLDHPNVVSL-KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQ-RMPLIYVK 58
+ +HPNVV L C S T++ E L LV E+V + + + K+ + +P +K
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLD---KVPEPGVPTETIK 123
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
+Q+ R L ++H+ V HRD+KPQN+LV + Q+KL DFG A++ S +
Sbjct: 124 DMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALTSVVV 181
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+ +YRAPE++ ++ Y +D+WS GC+ AE+ +PLF G S VDQL +I+ V+G P
Sbjct: 182 TLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240
Query: 179 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHP 238
E+ + F A P K F + DL+ + L ++P R +A AL HP
Sbjct: 241 EDWP-RDVALPRQAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 298
Query: 239 FFDEL 243
+F +L
Sbjct: 299 YFQDL 303
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 134/260 (51%), Gaps = 23/260 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
M+ ++H N++SL + F +E + LV+E + + +VI+ +RM +
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD-HERMSYL---- 131
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +
Sbjct: 132 -LYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVT 188
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPE+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 180 EIKCMNP---NYTE-------FKFPQI---KAHPWHKIFQKRMPPEAVDLVSRLLQYSPN 226
+K + P NY E FP++ P K +A DL+S++L P
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 227 LRSTALEALIHPFFDELRDP 246
R + +AL HP+ + DP
Sbjct: 308 KRISVDDALQHPYINVWYDP 327
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 120/223 (53%), Gaps = 20/223 (8%)
Query: 29 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 88
LV E+V T + ++ Q + ++ Y Y+I +AL Y H ++G+ HRD+KP N+L
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVL 163
Query: 89 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 148
++ +L+L D+G A+ G+ + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 149 ELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKCMNPNYTEFKFPQIKAHPW 201
++ +P F G DQLV I KVLGT + I+ ++P + + + W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE-LDPRFNDI-LGRHSRKRW 281
Query: 202 ----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
H Q + PEA+D + +LL+Y R TA EA+ HP+F
Sbjct: 282 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 20/223 (8%)
Query: 29 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 88
LV E+V T + ++ Q + ++ Y Y+I +AL Y H ++G+ HRD+KP N++
Sbjct: 111 LVFEHVNNTDFK------QLRQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVM 163
Query: 89 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 148
++ +L+L D+G A+ G+ + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 149 ELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKCMNPNYTEFKFPQIKAHPW 201
++ +P F G DQLV I KVLGT + I+ ++P + + + W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE-LDPRFNDI-LGRHSRKRW 281
Query: 202 ----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
H Q + PEA+D + +LL+Y R TA EA+ HP+F
Sbjct: 282 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 136/265 (51%), Gaps = 31/265 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIY 56
M+ ++H N++ L + F +E + +V+E + + +VI+ H +MS
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS------- 129
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y
Sbjct: 130 --YLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPY 185
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ +RYYRAPE+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 177 TREEIKCMNP---NYTEFKFPQIKAHPWHKIF-----------QKRMPPEAVDLVSRLLQ 222
E +K + P Y E + P+ + + K+F K +A DL+S++L
Sbjct: 245 CPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 223 YSPNLRSTALEALIHPFFDELRDPN 247
+ R + EAL HP+ + DP+
Sbjct: 304 IDASKRISVDEALQHPYINVWYDPS 328
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 123 bits (309), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 20/223 (8%)
Query: 29 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 88
LV E+V T + ++ Q + ++ Y Y+I +AL Y H ++G+ HRD+KP N++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVM 163
Query: 89 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 148
++ +L+L D+G A+ G+ + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 149 ELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKCMNPNYTEFKFPQIKAHPW 201
++ +P F G DQLV I KVLGT + I+ ++P + + + W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE-LDPRFNDI-LGRHSRKRW 281
Query: 202 ----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
H Q + PEA+D + +LL+Y R TA EA+ HP+F
Sbjct: 282 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 123 bits (309), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 138/264 (52%), Gaps = 29/264 (10%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
M+ ++H N++ L + F S E ++Y+ V+E + + +VI+ +RM +
Sbjct: 78 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLCQVIQMELD-HERMSYL-- 132
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+
Sbjct: 133 ---LYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYV 187
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+RYYRAPE+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP
Sbjct: 188 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 246
Query: 178 REEIKCMNP---NYTEFKFPQIKAHPWHKIF-----------QKRMPPEAVDLVSRLLQY 223
E +K + P Y E + P+ + + K+F K +A DL+S++L
Sbjct: 247 PEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 224 SPNLRSTALEALIHPFFDELRDPN 247
+ R + EAL HP+ + DP+
Sbjct: 306 DASKRISVDEALQHPYINVWYDPS 329
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 20/223 (8%)
Query: 29 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 88
LV E+V T + ++ Q + ++ Y Y+I +AL Y H ++G+ HRD+KP N++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVM 163
Query: 89 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 148
++ +L+L D+G A+ G+ + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 149 ELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKCMNPNYTEFKFPQIKAHPW 201
++ +P F G DQLV I KVLGT + I+ ++P + + + W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE-LDPRFNDI-LGRHSRKRW 281
Query: 202 ----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
H Q + PEA+D + +LL+Y R TA EA+ HP+F
Sbjct: 282 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 20/223 (8%)
Query: 29 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 88
LV E+V T + ++ Q + ++ Y Y+I +AL Y H ++G+ HRD+KP N++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVM 163
Query: 89 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 148
++ +L+L D+G A+ G+ + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 149 ELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKCMNPNYTEFKFPQIKAHPW 201
++ +P F G DQLV I KVLGT + I+ ++P + + + W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE-LDPRFNDI-LGRHSRKRW 281
Query: 202 ----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
H Q + PEA+D + +LL+Y R TA EA+ HP+F
Sbjct: 282 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 137/265 (51%), Gaps = 31/265 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIY 56
M+ ++H N++ L + F +E + +V+E + + +VI+ H +MS
Sbjct: 79 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS------- 131
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ + +
Sbjct: 132 --YLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMVPF 187
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ +RYYRAPE+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP
Sbjct: 188 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 246
Query: 177 TREEIKCMNP---NYTEFKFPQIKAHPWHKIF-----------QKRMPPEAVDLVSRLLQ 222
E +K + P Y E + P+ + + K+F K +A DL+S++L
Sbjct: 247 CPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 305
Query: 223 YSPNLRSTALEALIHPFFDELRDPN 247
+ R + EAL HP+ + DP+
Sbjct: 306 IDASKRISVDEALQHPYINVWYDPS 330
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 20/223 (8%)
Query: 29 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 88
LV E+V T + ++ Q + ++ Y Y+I +AL Y H ++G+ HRD+KP N++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVM 163
Query: 89 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 148
++ +L+L D+G A+ G+ + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 149 ELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKCMNPNYTEFKFPQIKAHPW 201
++ +P F G DQLV I KVLGT + I+ ++P + + + W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE-LDPRFNDI-LGRHSRKRW 281
Query: 202 ----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
H Q + PEA+D + +LL+Y R TA EA+ HP+F
Sbjct: 282 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 20/223 (8%)
Query: 29 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 88
LV E+V T + ++ Q + ++ Y Y+I +AL Y H ++G+ HRD+KP N++
Sbjct: 110 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVM 162
Query: 89 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 148
++ +L+L D+G A+ G+ + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 163 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 222
Query: 149 ELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKCMNPNYTEFKFPQIKAHPW 201
++ +P F G DQLV I KVLGT + I+ ++P + + + W
Sbjct: 223 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE-LDPRFNDI-LGRHSRKRW 280
Query: 202 ----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
H Q + PEA+D + +LL+Y R TA EA+ HP+F
Sbjct: 281 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 20/223 (8%)
Query: 29 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 88
LV E+V T + ++ Q + ++ Y Y+I +AL Y H ++G+ HRD+KP N++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVM 163
Query: 89 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 148
++ +L+L D+G A+ G+ + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 149 ELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKCMNPNYTEFKFPQIKAHPW 201
++ +P F G DQLV I KVLGT + I+ ++P + + + W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE-LDPRFNDI-LGRHSRKRW 281
Query: 202 ----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
H Q + PEA+D + +LL+Y R TA EA+ HP+F
Sbjct: 282 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 20/223 (8%)
Query: 29 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 88
LV E+V T + ++ Q + ++ Y Y+I +AL Y H ++G+ HRD+KP N++
Sbjct: 109 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVM 161
Query: 89 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 148
++ +L+L D+G A+ G+ + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 162 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 221
Query: 149 ELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKCMNPNYTEFKFPQIKAHPW 201
++ +P F G DQLV I KVLGT + I+ ++P + + + W
Sbjct: 222 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE-LDPRFNDI-LGRHSRKRW 279
Query: 202 ----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
H Q + PEA+D + +LL+Y R TA EA+ HP+F
Sbjct: 280 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 20/223 (8%)
Query: 29 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 88
LV E+V T + ++ Q + ++ Y Y+I +AL Y H ++G+ HRD+KP N++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVM 163
Query: 89 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 148
++ +L+L D+G A+ G+ + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 149 ELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKCMNPNYTEFKFPQIKAHPW 201
++ +P F G DQLV I KVLGT + I+ ++P + + + W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE-LDPRFNDI-LGRHSRKRW 281
Query: 202 ----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
H Q + PEA+D + +LL+Y R TA EA+ HP+F
Sbjct: 282 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 20/223 (8%)
Query: 29 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 88
LV E+V T + ++ Q + ++ Y Y+I +AL Y H ++G+ HRD+KP N++
Sbjct: 110 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVM 162
Query: 89 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 148
++ +L+L D+G A+ G+ + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 163 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 222
Query: 149 ELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKCMNPNYTEFKFPQIKAHPW 201
++ +P F G DQLV I KVLGT + I+ ++P + + + W
Sbjct: 223 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE-LDPRFNDI-LGRHSRKRW 280
Query: 202 ----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
H Q + PEA+D + +LL+Y R TA EA+ HP+F
Sbjct: 281 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 20/223 (8%)
Query: 29 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 88
LV E+V T + ++ Q + ++ Y Y+I +AL Y H ++G+ HRD+KP N++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVM 163
Query: 89 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 148
++ +L+L D+G A+ G+ + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 149 ELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKCMNPNYTEFKFPQIKAHPW 201
++ +P F G DQLV I KVLGT + I+ ++P + + + W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE-LDPRFNDI-LGRHSRKRW 281
Query: 202 ----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
H Q + PEA+D + +LL+Y R TA EA+ HP+F
Sbjct: 282 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 20/223 (8%)
Query: 29 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 88
LV E+V T + ++ Q + ++ Y Y+I +AL Y H ++G+ HRD+KP N++
Sbjct: 116 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVM 168
Query: 89 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 148
++ +L+L D+G A+ G+ + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 169 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 228
Query: 149 ELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKCMNPNYTEFKFPQIKAHPW 201
++ +P F G DQLV I KVLGT + I+ ++P + + + W
Sbjct: 229 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE-LDPRFNDI-LGRHSRKRW 286
Query: 202 ----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
H Q + PEA+D + +LL+Y R TA EA+ HP+F
Sbjct: 287 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 20/223 (8%)
Query: 29 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 88
LV E+V T + ++ Q + ++ Y Y+I +AL Y H ++G+ HRD+KP N++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVM 163
Query: 89 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 148
++ +L+L D+G A+ G+ + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 149 ELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKCMNPNYTEFKFPQIKAHPW 201
++ +P F G DQLV I KVLGT + I+ ++P + + + W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE-LDPRFNDI-LGRHSRKRW 281
Query: 202 ----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
H Q + PEA+D + +LL+Y R TA EA+ HP+F
Sbjct: 282 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 29/263 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIY 56
M+ ++H N++SL + F +E + LV+E + + +VI+ H +MS
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS------- 130
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y
Sbjct: 131 --YLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPY 186
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ +RYYRAPE+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP
Sbjct: 187 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 177 TREEIKCMNP---NYTE-------FKFPQI---KAHPWHKIFQKRMPPEAVDLVSRLLQY 223
E +K + P NY E FP++ P K +A DL+S++L
Sbjct: 246 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 224 SPNLRSTALEALIHPFFDELRDP 246
P R + +AL HP+ + DP
Sbjct: 306 DPAKRISVDDALQHPYINVWYDP 328
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 29/263 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIY 56
M+ ++H N++SL + F +E + LV+E + + +VI+ H +MS
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS------- 123
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y
Sbjct: 124 --YLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPY 179
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ +RYYRAPE+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP
Sbjct: 180 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 177 TREEIKCMNP---NYTE-------FKFPQI---KAHPWHKIFQKRMPPEAVDLVSRLLQY 223
E +K + P NY E FP++ P K +A DL+S++L
Sbjct: 239 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 298
Query: 224 SPNLRSTALEALIHPFFDELRDP 246
P R + +AL HP+ + DP
Sbjct: 299 DPAKRISVDDALQHPYINVWYDP 321
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 20/223 (8%)
Query: 29 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 88
LV E+V T + ++ Q + ++ Y Y+I +AL Y H ++G+ HRD+KP N++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVM 163
Query: 89 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 148
++ +L+L D+G A+ G+ + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 149 ELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKCMNPNYTEFKFPQIKAHPW 201
++ +P F G DQLV I KVLGT + I+ ++P + + + W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE-LDPRFNDI-LGRHSRKRW 281
Query: 202 ----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
H Q + PEA+D + +LL+Y R TA EA+ HP+F
Sbjct: 282 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 29/263 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIY 56
M+ ++H N++SL + F +E + LV+E + + +VI+ H +MS
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS------- 129
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y
Sbjct: 130 --YLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPY 185
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ +RYYRAPE+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 177 TREEIKCMNP---NYTE-------FKFPQI---KAHPWHKIFQKRMPPEAVDLVSRLLQY 223
E +K + P NY E FP++ P K +A DL+S++L
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 224 SPNLRSTALEALIHPFFDELRDP 246
P R + +AL HP+ + DP
Sbjct: 305 DPAKRISVDDALQHPYINVWYDP 327
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 29/263 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIY 56
M+ ++H N++SL + F +E + LV+E + + +VI+ H +MS
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS------- 129
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y
Sbjct: 130 --YLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPY 185
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ +RYYRAPE+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 177 TREEIKCMNP---NYTE-------FKFPQI---KAHPWHKIFQKRMPPEAVDLVSRLLQY 223
E +K + P NY E FP++ P K +A DL+S++L
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 224 SPNLRSTALEALIHPFFDELRDP 246
P R + +AL HP+ + DP
Sbjct: 305 DPAKRISVDDALQHPYINVWYDP 327
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 130/242 (53%), Gaps = 11/242 (4%)
Query: 1 MRLLDHPNVVSL-KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQ-RMPLIYVK 58
+ +HPNVV L C S T++ E L LV E+V + + + K+ + +P +K
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLD---KVPEPGVPTETIK 123
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
+Q+ R L ++H+ V HRD+KPQN+LV + Q+KL DFG A++ S +
Sbjct: 124 DMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALTSVVV 181
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+ +YRAPE++ ++ Y +D+WS GC+ AE+ +PLF G S VDQL +I+ V+G P
Sbjct: 182 TLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240
Query: 179 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHP 238
E+ + F A P K F + DL+ + L ++P R +A AL HP
Sbjct: 241 EDWP-RDVALPRQAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 298
Query: 239 FF 240
+F
Sbjct: 299 YF 300
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 119/225 (52%), Gaps = 24/225 (10%)
Query: 29 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 88
LV EY+ T + ++ Q + ++ Y Y++ +AL Y H+ G+ HRD+KP N++
Sbjct: 117 LVFEYINNTDFK------QLYQILTDFDIRFYMYELLKALDYCHSK-GIMHRDVKPHNVM 169
Query: 89 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 148
++ +L+L D+G A+ + + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 170 IDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 229
Query: 149 ELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKC--------MNPNYTEFKFPQIKAH 199
++ +P F G+ DQLV I KVLGT EE+ ++P++ + Q
Sbjct: 230 SMIFRREPFFHGQDNYDQLVRIAKVLGT---EELYGYLKKYHIDLDPHFNDI-LGQHSRK 285
Query: 200 PWHKIFQKR----MPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
W + PEA+DL+ +LL+Y R TA EA+ HP+F
Sbjct: 286 RWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 29/263 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIY 56
M+ ++H N++SL + F +E + LV+E + + +VI+ H +MS
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS------- 122
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y
Sbjct: 123 --YLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPY 178
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ +RYYRAPE+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP
Sbjct: 179 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 177 TREEIKCMNP---NYTE-------FKFPQI---KAHPWHKIFQKRMPPEAVDLVSRLLQY 223
E +K + P NY E FP++ P K +A DL+S++L
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 297
Query: 224 SPNLRSTALEALIHPFFDELRDP 246
P R + +AL HP+ + DP
Sbjct: 298 DPAKRISVDDALQHPYINVWYDP 320
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 134/260 (51%), Gaps = 23/260 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
M+ ++H N++SL + F +E + LV+E + + +VI+ +RM +
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL---- 125
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +
Sbjct: 126 -LYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVT 182
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPE+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E
Sbjct: 183 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 241
Query: 180 EIKCMNP---NYTE-------FKFPQI---KAHPWHKIFQKRMPPEAVDLVSRLLQYSPN 226
+K + P NY E FP++ P K +A DL+S++L P
Sbjct: 242 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 301
Query: 227 LRSTALEALIHPFFDELRDP 246
R + +AL HP+ + DP
Sbjct: 302 KRISVDDALQHPYINVWYDP 321
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 29/263 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIY 56
M+ ++H N++SL + F +E + LV+E + + +VI+ H +MS
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS------- 130
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y
Sbjct: 131 --YLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPY 186
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ +RYYRAPE+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP
Sbjct: 187 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 177 TREEIKCMNP---NYTE-------FKFPQI---KAHPWHKIFQKRMPPEAVDLVSRLLQY 223
E +K + P NY E FP++ P K +A DL+S++L
Sbjct: 246 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 224 SPNLRSTALEALIHPFFDELRDP 246
P R + +AL HP+ + DP
Sbjct: 306 DPAKRISVDDALQHPYINVWYDP 328
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 134/260 (51%), Gaps = 23/260 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
M+ ++H N++SL + F +E + LV+E + + +VI+ +RM +
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL---- 169
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +
Sbjct: 170 -LYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVT 226
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPE+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E
Sbjct: 227 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 285
Query: 180 EIKCMNP---NYTE-------FKFPQI---KAHPWHKIFQKRMPPEAVDLVSRLLQYSPN 226
+K + P NY E FP++ P K +A DL+S++L P
Sbjct: 286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 345
Query: 227 LRSTALEALIHPFFDELRDP 246
R + +AL HP+ + DP
Sbjct: 346 KRISVDDALQHPYINVWYDP 365
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 29/263 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIY 56
M+ ++H N++SL + F +E + LV+E + + +VI+ H +MS
Sbjct: 76 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS------- 128
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y
Sbjct: 129 --YLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPY 184
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ +RYYRAPE+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP
Sbjct: 185 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 243
Query: 177 TREEIKCMNP---NYTE-------FKFPQI---KAHPWHKIFQKRMPPEAVDLVSRLLQY 223
E +K + P NY E FP++ P K +A DL+S++L
Sbjct: 244 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 303
Query: 224 SPNLRSTALEALIHPFFDELRDP 246
P R + +AL HP+ + DP
Sbjct: 304 DPAKRISVDDALQHPYINVWYDP 326
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 119/225 (52%), Gaps = 24/225 (10%)
Query: 29 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 88
LV EY+ T + ++ Q + ++ Y Y++ +AL Y H+ G+ HRD+KP N++
Sbjct: 112 LVFEYINNTDFK------QLYQILTDFDIRFYMYELLKALDYCHSK-GIMHRDVKPHNVM 164
Query: 89 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 148
++ +L+L D+G A+ + + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 165 IDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 224
Query: 149 ELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKC--------MNPNYTEFKFPQIKAH 199
++ +P F G+ DQLV I KVLGT EE+ ++P++ + Q
Sbjct: 225 SMIFRREPFFHGQDNYDQLVRIAKVLGT---EELYGYLKKYHIDLDPHFNDI-LGQHSRK 280
Query: 200 PWHKIFQKR----MPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
W + PEA+DL+ +LL+Y R TA EA+ HP+F
Sbjct: 281 RWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 29/263 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIY 56
M+ ++H N++SL + F +E + LV+E + + +VI+ H +MS
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS------- 167
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y
Sbjct: 168 --YLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPY 223
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ +RYYRAPE+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP
Sbjct: 224 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
Query: 177 TREEIKCMNP---NYTE-------FKFPQI---KAHPWHKIFQKRMPPEAVDLVSRLLQY 223
E +K + P NY E FP++ P K +A DL+S++L
Sbjct: 283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 342
Query: 224 SPNLRSTALEALIHPFFDELRDP 246
P R + +AL HP+ + DP
Sbjct: 343 DPAKRISVDDALQHPYINVWYDP 365
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 133/260 (51%), Gaps = 23/260 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
++ ++H N++SL + F +E + LV+E + + +VI H +RM +
Sbjct: 75 LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-HMELDHERMSYL---- 129
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +
Sbjct: 130 -LYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTASTNFMMTPYVVT 186
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPE+I G Y +DIWS GC++ EL+ G +F G +DQ ++I+ LGTP+ E
Sbjct: 187 RYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAE 245
Query: 180 EIKCMNP---NYTEFK--FPQIKAH--------PWHKIFQKRMPPEAVDLVSRLLQYSPN 226
+ + P NY E + +P I P K +A DL+S++L P+
Sbjct: 246 FMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPD 305
Query: 227 LRSTALEALIHPFFDELRDP 246
R + EAL HP+ DP
Sbjct: 306 KRISVDEALRHPYITVWYDP 325
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 132/255 (51%), Gaps = 23/255 (9%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
M+ ++H N++SL + F +E + LV+E + + +VI+ +RM +
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL---- 131
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +
Sbjct: 132 -LYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVT 188
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPE+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E
Sbjct: 189 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 180 EIKCMNP---NYTE-------FKFPQI---KAHPWHKIFQKRMPPEAVDLVSRLLQYSPN 226
+K + P NY E FP++ P K +A DL+S++L P
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 227 LRSTALEALIHPFFD 241
R + +AL HP+ +
Sbjct: 308 KRISVDDALQHPYIN 322
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 136/265 (51%), Gaps = 31/265 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIY 56
M+ ++H N++ L + F +E + +V+E + + +VI+ H +MS
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS------- 129
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+
Sbjct: 130 --YLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPE 185
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ +RYYRAPE+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 177 TREEIKCMNP---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQ 222
E +K + P Y E + P+ + + K+F + P +A DL+S++L
Sbjct: 245 CPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLV 303
Query: 223 YSPNLRSTALEALIHPFFDELRDPN 247
+ R + EAL HP+ + DP+
Sbjct: 304 IDASKRISVDEALQHPYINVWYDPS 328
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 136/262 (51%), Gaps = 25/262 (9%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
M+ ++H N++ L + F +E + +V+E + + +VI+ +RM +
Sbjct: 71 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL---- 125
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +
Sbjct: 126 -LYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVT 182
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPE+I G Y +D+WS GC++ E++ + LFPG +DQ ++I+ LGTP E
Sbjct: 183 RYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPE 241
Query: 180 EIKCMNP---NYTEFKFPQIKAHPWHKIF-----------QKRMPPEAVDLVSRLLQYSP 225
+K + P Y E + P+ + + K+F K +A DL+S++L
Sbjct: 242 FMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 300
Query: 226 NLRSTALEALIHPFFDELRDPN 247
+ R + EAL HP+ + DP+
Sbjct: 301 SKRISVDEALQHPYINVWYDPS 322
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 136/262 (51%), Gaps = 25/262 (9%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
M+ ++H N++ L + F +E + +V+E + + +VI+ +RM +
Sbjct: 82 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL---- 136
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +
Sbjct: 137 -LYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVT 193
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
RYYRAPE+I G Y +D+WS GC++ E++ + LFPG +DQ ++I+ LGTP E
Sbjct: 194 RYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPE 252
Query: 180 EIKCMNP---NYTEFKFPQIKAHPWHKIF-----------QKRMPPEAVDLVSRLLQYSP 225
+K + P Y E + P+ + + K+F K +A DL+S++L
Sbjct: 253 FMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 311
Query: 226 NLRSTALEALIHPFFDELRDPN 247
+ R + EAL HP+ + DP+
Sbjct: 312 SKRISVDEALQHPYINVWYDPS 333
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 132/249 (53%), Gaps = 22/249 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L H N++ LK L+L+ EY + + + + +S R+ +K +
Sbjct: 87 LKELQHRNIIELKSVIHHNHR-----LHLIFEYAENDLKKYMDKNPDVSMRV----IKSF 137
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVN----PHTHQLKLCDFGSAKVLVKGEPNISY 116
YQ+ + + H+ HRD+KPQNLL++ T LK+ DFG A+ G P +
Sbjct: 138 LYQLINGVNFCHSR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQF 194
Query: 117 ---ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVL 173
I + +YR PE++ G+ Y+ ++DIWS C+ AE+L+ PLFPG+S +DQL +I +VL
Sbjct: 195 THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVL 254
Query: 174 GTPTREEIKCMN--PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTA 231
G P + P++ + FP+ + ++ + E +DL++ +L+ P R +A
Sbjct: 255 GLPDDTTWPGVTALPDWKQ-SFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISA 313
Query: 232 LEALIHPFF 240
AL HP+F
Sbjct: 314 KNALEHPYF 322
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 137/267 (51%), Gaps = 35/267 (13%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIK---HHYKMSQRMPL 54
M+ ++H N++ L + F S E ++Y+ V+E + + +VI+ H +MS
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLCQVIQMELDHERMS----- 129
Query: 55 IYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 114
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+
Sbjct: 130 ----YLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMME 183
Query: 115 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
+ +RYYRAPE+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LG
Sbjct: 184 PEVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLG 242
Query: 175 TPTREEIKCMNP---NYTEFKFPQIKAHPWHKIF-----------QKRMPPEAVDLVSRL 220
TP +K + P NY E + P+ + + K+F K +A DL+S++
Sbjct: 243 TPCPAFMKKLQPTVRNYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 221 LQYSPNLRSTALEALIHPFFDELRDPN 247
L + R + EAL HP+ + DP+
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPS 328
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 137/267 (51%), Gaps = 35/267 (13%)
Query: 1 MRLLDHPNVVSLKHCFF---STTEKDELYLNLVLEYVPETVHRVIK---HHYKMSQRMPL 54
M+ ++H N++ L + F S E ++Y+ V+E + + +VI+ H +MS
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLCQVIQMELDHERMS----- 129
Query: 55 IYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 114
YQ+ + ++H+ G+ HRD+KP N++V LK+ DFG A+
Sbjct: 130 ----YLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMME 183
Query: 115 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
+ +RYYRAPE+I G Y +D+WS GC++ E++ + LFPG +DQ ++I+ LG
Sbjct: 184 PEVVTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLG 242
Query: 175 TPTREEIKCMNP---NYTEFKFPQIKAHPWHKIF-----------QKRMPPEAVDLVSRL 220
TP E +K + P Y E + P+ + + K+F K +A DL+S++
Sbjct: 243 TPCPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 221 LQYSPNLRSTALEALIHPFFDELRDPN 247
L + R + EAL HP+ + DP+
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPS 328
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 137/279 (49%), Gaps = 42/279 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHY-----KMSQRMPLI 55
+R L HPNV+SL+ F S ++ + L+ +Y + +IK H K ++P
Sbjct: 72 LRELKHPNVISLQKVFLSHADRK---VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRG 128
Query: 56 YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVL---VK 109
VK YQI + Y+H V HRD+KP N+LV P ++K+ D G A++ +K
Sbjct: 129 MVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK 187
Query: 110 GEPNIS-YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV----- 163
++ + + +YRAPEL+ GA YT AIDIW+ GC+ AELL +P+F
Sbjct: 188 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN 247
Query: 164 ----DQLVEIIKVLGTPTR---EEIKCMNPNYTEFKFPQ---------IKAHPWHKIFQK 207
DQL I V+G P E+IK M + T K + IK HK+
Sbjct: 248 PYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKV--- 304
Query: 208 RMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELRDP 246
+ +A L+ +LL P R T+ +A+ P+F L DP
Sbjct: 305 KPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF--LEDP 341
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 137/279 (49%), Gaps = 69/279 (24%)
Query: 23 DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDI 82
DELY+ VLE + ++ K +++ ++K Y + +IH + G+ HRD+
Sbjct: 103 DELYI--VLEIADSDLKKLFKTPIFLTEE----HIKTILYNLLLGENFIHES-GIIHRDL 155
Query: 83 KPQNLLVNPHTHQLKLCDFGSAKVL-VKGEPNI----------------------SYICS 119
KP N L+N +K+CDFG A+ + + + NI S++ +
Sbjct: 156 KPANCLLNQDC-SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVT 214
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQ----------PLFPG--------- 159
R+YRAPELI YT +IDIWS GC+ AELL + Q PLFPG
Sbjct: 215 RWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPD 274
Query: 160 --------ESGVDQLVEIIKVLGTPTREEIKCMN-PNYTEFKFPQIKAHPWHK---IFQK 207
+S DQL I ++GTPT +++K +N P ++ IK P K + QK
Sbjct: 275 RNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKY----IKLFPHRKPINLKQK 330
Query: 208 --RMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELR 244
+ + ++L+ +L+++PN R T +AL HP+ ++R
Sbjct: 331 YPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVR 369
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 127/284 (44%), Gaps = 71/284 (25%)
Query: 23 DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDI 82
DELY+ VLE ++ + +++ +++K Y + + Y+H + G+ HRD+
Sbjct: 130 DELYV--VLEIADSDFKKLFRTPVYLTE----LHIKTLLYNLLVGVKYVH-SAGILHRDL 182
Query: 83 KPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS--------------------------- 115
KP N LVN +K+CDFG A+ + E S
Sbjct: 183 KPANCLVNQDC-SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLT 241
Query: 116 -YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL-----------LGQPLFPGES-- 161
++ +R+YRAPELI YT AID+WS GC+ AELL PLFPG S
Sbjct: 242 GHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCF 301
Query: 162 ------------------GVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHK 203
DQL I +LGTP+ E+I+ + + ++ +I
Sbjct: 302 PLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAK-RYIRIFPKREGT 360
Query: 204 IFQKRMPPEAVD---LVSRLLQYSPNLRSTALEALIHPFFDELR 244
+R P + D L+ R+L ++PN R T E L HPFF E+R
Sbjct: 361 DLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR 404
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 129/284 (45%), Gaps = 70/284 (24%)
Query: 23 DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDI 82
DELY+ VLE + ++ K ++++ +VK Y + +IH + G+ HRD+
Sbjct: 105 DELYI--VLEIADSDLKKLFKTPIFLTEQ----HVKTILYNLLLGEKFIHES-GIIHRDL 157
Query: 83 KPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI---------------------------S 115
KP N L+N +K+CDFG A+ + + +I S
Sbjct: 158 KPANCLLNQDC-SVKICDFGLART-INSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTS 215
Query: 116 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-----------PLFPG----- 159
++ +R+YRAPELI YT +IDIWS GC+ AELL PLFPG
Sbjct: 216 HVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFP 275
Query: 160 ------------ESGVDQLVEIIKVLGTPTREEIKCMNPN----YTEFKFPQIKAHPWHK 203
+S DQL I V+GTP E++KC+ Y + FP K
Sbjct: 276 LSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKL-FPTRDGIDLSK 334
Query: 204 IFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELRDPN 247
+ + E +DL+ +L+++ R T +AL HP+ ++R N
Sbjct: 335 KYSS-ISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKEN 377
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 116/240 (48%), Gaps = 7/240 (2%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+ +HPNVV L ++ E+ + LV E+V + + + +P +K
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDL 125
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
Q R L ++H + HRD+KP+N+LV +KL DFG A++ + +
Sbjct: 126 MRQFLRGLDFLHANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALTPVVVTL 183
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 180
+YRAPE++ +T Y +D+WS GC+ AE+ +PLF G S DQL +I ++G P ++
Sbjct: 184 WYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 242
Query: 181 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
+ + FP P + + M L+ +L ++P+ R +A AL H +
Sbjct: 243 WP-RDVSLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 116/240 (48%), Gaps = 7/240 (2%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+ +HPNVV L ++ E+ + LV E+V + + + +P +K
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDL 117
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
Q R L ++H + HRD+KP+N+LV +KL DFG A++ + +
Sbjct: 118 MRQFLRGLDFLHANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALFPVVVTL 175
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 180
+YRAPE++ +T Y +D+WS GC+ AE+ +PLF G S DQL +I ++G P ++
Sbjct: 176 WYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 234
Query: 181 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
+ + FP P + + M L+ +L ++P+ R +A AL H +
Sbjct: 235 WP-RDVSLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 116/240 (48%), Gaps = 7/240 (2%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+ +HPNVV L ++ E+ + LV E+V + + + +P +K
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDL 117
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
Q R L ++H + HRD+KP+N+LV +KL DFG A++ + +
Sbjct: 118 MRQFLRGLDFLHANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALAPVVVTL 175
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 180
+YRAPE++ +T Y +D+WS GC+ AE+ +PLF G S DQL +I ++G P ++
Sbjct: 176 WYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 234
Query: 181 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
+ + FP P + + M L+ +L ++P+ R +A AL H +
Sbjct: 235 WP-RDVSLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 116/240 (48%), Gaps = 7/240 (2%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+ +HPNVV L ++ E+ + LV E+V + + + +P +K
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDL 117
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
Q R L ++H + HRD+KP+N+LV +KL DFG A++ + +
Sbjct: 118 MRQFLRGLDFLHANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALDPVVVTL 175
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 180
+YRAPE++ +T Y +D+WS GC+ AE+ +PLF G S DQL +I ++G P ++
Sbjct: 176 WYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 234
Query: 181 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
+ + FP P + + M L+ +L ++P+ R +A AL H +
Sbjct: 235 WP-RDVSLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 135/274 (49%), Gaps = 45/274 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+R D N +++ H + T ++ ++ + E + ++ +IK + +PL V+ +
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPL--VRKF 205
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ-LKLCDFGSAKVLVKGEPNISYICS 119
+ I + L +H + H D+KP+N+L+ +K+ DFGS+ + + + I S
Sbjct: 206 AHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXIQS 262
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
R+YRAPE+I GA Y ID+WS GC+LAELL G PL PGE DQL +I++LG P++
Sbjct: 263 RFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ- 320
Query: 180 EIKCMNPNYTEFKFPQIKAHPWH------------------KIFQKRMPPEA-------- 213
K ++ + F K +P + + + R PPE+
Sbjct: 321 --KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALK 378
Query: 214 -------VDLVSRLLQYSPNLRSTALEALIHPFF 240
+D + + L++ P +R T +AL HP+
Sbjct: 379 GCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 135/274 (49%), Gaps = 45/274 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+R D N +++ H + T ++ ++ + E + ++ +IK + +PL V+ +
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPL--VRKF 205
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ-LKLCDFGSAKVLVKGEPNISYICS 119
+ I + L +H + H D+KP+N+L+ +K+ DFGS+ + + + I S
Sbjct: 206 AHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXIQS 262
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
R+YRAPE+I GA Y ID+WS GC+LAELL G PL PGE DQL +I++LG P++
Sbjct: 263 RFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ- 320
Query: 180 EIKCMNPNYTEFKFPQIKAHPWH------------------KIFQKRMPPEA-------- 213
K ++ + F K +P + + + R PPE+
Sbjct: 321 --KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALK 378
Query: 214 -------VDLVSRLLQYSPNLRSTALEALIHPFF 240
+D + + L++ P +R T +AL HP+
Sbjct: 379 GCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 45/274 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+R D N +++ H + T ++ ++ + E + ++ +IK + +PL V+ +
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPL--VRKF 205
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ-LKLCDFGSAKVLVKGEPNISYICS 119
+ I + L +H + H D+KP+N+L+ +K+ DFGS+ + + I S
Sbjct: 206 AHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYXXIQS 262
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
R+YRAPE+I GA Y ID+WS GC+LAELL G PL PGE DQL +I++LG P +
Sbjct: 263 RFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQ- 320
Query: 180 EIKCMNPNYTEFKFPQIKAHPWH------------------KIFQKRMPPEA-------- 213
K ++ + F K +P + + + R PPE+
Sbjct: 321 --KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALK 378
Query: 214 -------VDLVSRLLQYSPNLRSTALEALIHPFF 240
+D + + L++ P +R T +AL HP+
Sbjct: 379 GCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 105/225 (46%), Gaps = 44/225 (19%)
Query: 63 QICRALAYIHN-TIGVCHRDIKPQN-LLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
Q+C AL ++ + + H D+KP+N LL NP +K+ DFGS+ L G+ I SR
Sbjct: 146 QMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSR 203
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 180
+YR+PE++ G Y AID+WS GC+L E+ G+PLF G + VDQ+ +I++VLG P
Sbjct: 204 FYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP-AH 261
Query: 181 IKCMNPNYTEFKFPQIKAHPWH----KIFQKRMPPEAV---------------------- 214
I P +F F ++ W+ K ++ P
Sbjct: 262 ILDQAPKARKF-FEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGES 320
Query: 215 -----------DLVSRLLQYSPNLRSTALEALIHPFFDELRDPNT 248
DL+ R+L Y P R AL H FF + D T
Sbjct: 321 GHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTADEGT 365
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 104/222 (46%), Gaps = 44/222 (19%)
Query: 63 QICRALAYIHN-TIGVCHRDIKPQN-LLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
Q+C AL ++ + + H D+KP+N LL NP +K+ DFGS+ L G+ I SR
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSR 222
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 180
+YR+PE++ G Y AID+WS GC+L E+ G+PLF G + VDQ+ +I++VLG P
Sbjct: 223 FYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP-AH 280
Query: 181 IKCMNPNYTEFKFPQIKAHPWH----KIFQKRMPPEAV---------------------- 214
I P +F F ++ W+ K ++ P
Sbjct: 281 ILDQAPKARKF-FEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGES 339
Query: 215 -----------DLVSRLLQYSPNLRSTALEALIHPFFDELRD 245
DL+ R+L Y P R AL H FF + D
Sbjct: 340 GHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 104/222 (46%), Gaps = 44/222 (19%)
Query: 63 QICRALAYIHN-TIGVCHRDIKPQN-LLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
Q+C AL ++ + + H D+KP+N LL NP +K+ DFGS+ L G+ I SR
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL--GQRIYQXIQSR 222
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 180
+YR+PE++ G Y AID+WS GC+L E+ G+PLF G + VDQ+ +I++VLG P
Sbjct: 223 FYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP-AH 280
Query: 181 IKCMNPNYTEFKFPQIKAHPWH----KIFQKRMPPEAV---------------------- 214
I P +F F ++ W+ K ++ P
Sbjct: 281 ILDQAPKARKF-FEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGES 339
Query: 215 -----------DLVSRLLQYSPNLRSTALEALIHPFFDELRD 245
DL+ R+L Y P R AL H FF + D
Sbjct: 340 GHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 137/291 (47%), Gaps = 46/291 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++LLDH F+ + +++ +V E + E + +IK + + +PLIYVK
Sbjct: 89 LKLLDH----------FNHKGPNGVHVVMVFEVLGENLLALIKKY--EHRGIPLIYVKQI 136
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVN-----PHTHQLKLCDFGSAKVLVKGEPNIS 115
Q+ L Y+H G+ H DIKP+N+L+ + Q+K+ D G+A E +
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDEHYTN 194
Query: 116 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESG------VDQLVEI 169
I +R YR+PE++ GA + DIWS C++ EL+ G LF + G D + +I
Sbjct: 195 SIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
Query: 170 IKVLG------------TPTREEIKCMNPNYTEFKFPQIKAHPWHKI-FQKRMPPEAVDL 216
I++LG T T + + N ++ KF ++ K F K E D
Sbjct: 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDF 313
Query: 217 VSRLLQYSPNLRSTALEALIHPFF------DELRDPNTRL-PNGRFLPPLF 260
+S +LQ P R+ A + HP+ +E+R P+ L +G +P F
Sbjct: 314 LSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 364
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 137/291 (47%), Gaps = 46/291 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++LLDH F+ + +++ +V E + E + +IK + + +PLIYVK
Sbjct: 89 LKLLDH----------FNHKGPNGVHVVMVFEVLGENLLALIKKY--EHRGIPLIYVKQI 136
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVN-----PHTHQLKLCDFGSAKVLVKGEPNIS 115
Q+ L Y+H G+ H DIKP+N+L+ + Q+K+ D G+A E +
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDEHYTN 194
Query: 116 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESG------VDQLVEI 169
I +R YR+PE++ GA + DIWS C++ EL+ G LF + G D + +I
Sbjct: 195 SIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
Query: 170 IKVLG------------TPTREEIKCMNPNYTEFKFPQIKAHPWHKI-FQKRMPPEAVDL 216
I++LG T T + + N ++ KF ++ K F K E D
Sbjct: 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDF 313
Query: 217 VSRLLQYSPNLRSTALEALIHPFF------DELRDPNTRL-PNGRFLPPLF 260
+S +LQ P R+ A + HP+ +E+R P+ L +G +P F
Sbjct: 314 LSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 364
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 122/248 (49%), Gaps = 42/248 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L+HP ++ +K+ F + ++ Y+ L L E +V+ + +R+ KLY
Sbjct: 69 LKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLY 119
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNI-SYI 117
FYQ+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +
Sbjct: 120 FYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 176
Query: 118 CSR-YYRAPELIF--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
C Y APE++ G Y A+D WS G +L L G P F L
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------- 228
Query: 175 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
+++I N+ P++ W ++ +K A+DLV +LL P R T EA
Sbjct: 229 ---KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEA 272
Query: 235 LIHPFFDE 242
L HP+ +
Sbjct: 273 LRHPWLQD 280
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 122/248 (49%), Gaps = 42/248 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L+HP ++ +K+ F + ++ Y+ L L E +V+ + +R+ KLY
Sbjct: 75 LKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLY 125
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNI-SYI 117
FYQ+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +
Sbjct: 126 FYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 182
Query: 118 CSR-YYRAPELIF--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
C Y APE++ G Y A+D WS G +L L G P F L
Sbjct: 183 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------- 234
Query: 175 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
+++I N+ P++ W ++ +K A+DLV +LL P R T EA
Sbjct: 235 ---KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEA 278
Query: 235 LIHPFFDE 242
L HP+ +
Sbjct: 279 LRHPWLQD 286
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 122/248 (49%), Gaps = 42/248 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L+HP ++ +K+ F + ++ Y+ L L E +V+ + +R+ KLY
Sbjct: 69 LKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLY 119
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNI-SYI 117
FYQ+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +
Sbjct: 120 FYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 176
Query: 118 CSR-YYRAPELIF--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
C Y APE++ G Y A+D WS G +L L G P F L
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------- 228
Query: 175 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
+++I N+ P++ W ++ +K A+DLV +LL P R T EA
Sbjct: 229 ---KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEA 272
Query: 235 LIHPFFDE 242
L HP+ +
Sbjct: 273 LRHPWLQD 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 122/248 (49%), Gaps = 42/248 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L+HP ++ +K+ F + ++ Y+ L L E +V+ + +R+ KLY
Sbjct: 69 LKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLY 119
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNI-SYI 117
FYQ+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +
Sbjct: 120 FYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 176
Query: 118 CSR-YYRAPELIF--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
C Y APE++ G Y A+D WS G +L L G P F L
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------- 228
Query: 175 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
+++I N+ P++ W ++ +K A+DLV +LL P R T EA
Sbjct: 229 ---KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEA 272
Query: 235 LIHPFFDE 242
L HP+ +
Sbjct: 273 LRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 122/248 (49%), Gaps = 42/248 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L+HP ++ +K+ F + ++ Y+ L L E +V+ + +R+ KLY
Sbjct: 68 LKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLY 118
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNI-SYI 117
FYQ+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +
Sbjct: 119 FYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 175
Query: 118 CSR-YYRAPELIF--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
C Y APE++ G Y A+D WS G +L L G P F L
Sbjct: 176 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------- 227
Query: 175 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
+++I N+ P++ W ++ +K A+DLV +LL P R T EA
Sbjct: 228 ---KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEA 271
Query: 235 LIHPFFDE 242
L HP+ +
Sbjct: 272 LRHPWLQD 279
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 122/248 (49%), Gaps = 42/248 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L+HP ++ +K+ F + ++ Y+ L L E +V+ + +R+ KLY
Sbjct: 208 LKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLY 258
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNI-SYI 117
FYQ+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +
Sbjct: 259 FYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 315
Query: 118 CSR-YYRAPELIF--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
C Y APE++ G Y A+D WS G +L L G P F L
Sbjct: 316 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------- 367
Query: 175 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
+++I N+ P++ W ++ +K A+DLV +LL P R T EA
Sbjct: 368 ---KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEA 411
Query: 235 LIHPFFDE 242
L HP+ +
Sbjct: 412 LRHPWLQD 419
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 122/248 (49%), Gaps = 42/248 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L+HP ++ +K+ F + ++ Y+ L L E +V+ + +R+ KLY
Sbjct: 194 LKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLY 244
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNI-SYI 117
FYQ+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +
Sbjct: 245 FYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 301
Query: 118 CSR-YYRAPELIF--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
C Y APE++ G Y A+D WS G +L L G P F L
Sbjct: 302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------- 353
Query: 175 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
+++I N+ P++ W ++ +K A+DLV +LL P R T EA
Sbjct: 354 ---KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEA 397
Query: 235 LIHPFFDE 242
L HP+ +
Sbjct: 398 LRHPWLQD 405
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 127/264 (48%), Gaps = 43/264 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLE-YVPETVHRVIKHHYKMSQRMPLIYVKL 59
++LLDHPN++ L + FF +D+ LV+E Y + I H K ++ + +K
Sbjct: 90 LKLLDHPNIMKL-YDFF----EDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK- 143
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYI 117
Q+ + Y+H + HRD+KP+NLL+ +K+ DFG + V + +
Sbjct: 144 ---QVLSGVTYLHKH-NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL 199
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ YY APE++ +Y D+WS G +L LL G P F G++ DQ EI++
Sbjct: 200 GTAYYIAPEVL--RKKYDEKCDVWSIGVILFILLAGYPPFGGQT--DQ--EILR------ 247
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
K YT F P+ W K + A DL+ ++LQ+ R +A +AL H
Sbjct: 248 ----KVEKGKYT-FDSPE-----W-----KNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292
Query: 238 PFFDELRDPNTRLPNGRFLPPLFN 261
P+ E+ ++ +G LP L N
Sbjct: 293 PWIKEM---CSKKESGIELPSLAN 313
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 43/227 (18%)
Query: 54 LIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL---------------------VNPH 92
L +++ YQIC+++ ++H+ + H D+KP+N+L +NP
Sbjct: 117 LDHIRKMAYQICKSVNFLHSN-KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP- 174
Query: 93 THQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLL 152
+K+ DFGSA E + + + +R+YRAPE+I A ++ D+WS GC+L E L
Sbjct: 175 --DIKVVDFGSATY--DDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYL 229
Query: 153 GQPLFPGESGVDQLVEIIKVLG---------TPTREEIKCMNPNYTEFKFPQIKAHPWHK 203
G +FP + L + ++LG T R+ ++ E K
Sbjct: 230 GFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACK 289
Query: 204 IFQKRMPPEAV------DLVSRLLQYSPNLRSTALEALIHPFFDELR 244
++ M + V DL+ ++L+Y P R T EAL HPFFD L+
Sbjct: 290 PLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLK 336
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 22/254 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTE-----KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 55
++LL H NVV+L + K +YL V ++ + ++ + + + L
Sbjct: 70 LQLLKHENVVNLIEICRTKASPYNRCKGSIYL--VFDFCEHDLAGLLSN---VLVKFTLS 124
Query: 56 YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV---KGEP 112
+K + L YIH + HRD+K N+L+ LKL DFG A+ +P
Sbjct: 125 EIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQP 182
Query: 113 N--ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
N + + + +YR PEL+ G +Y ID+W AGC++AE+ P+ G + QL I
Sbjct: 183 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 242
Query: 171 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMP----PEAVDLVSRLLQYSPN 226
++ G+ T E ++ NY ++ ++ K+ + P A+DL+ +LL P
Sbjct: 243 QLCGSITPEVWPNVD-NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 301
Query: 227 LRSTALEALIHPFF 240
R + +AL H FF
Sbjct: 302 QRIDSDDALNHDFF 315
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 22/254 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTE-----KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 55
++LL H NVV+L + K +YL V ++ + ++ + + + L
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYL--VFDFCEHDLAGLLSN---VLVKFTLS 125
Query: 56 YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV---KGEP 112
+K + L YIH + HRD+K N+L+ LKL DFG A+ +P
Sbjct: 126 EIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQP 183
Query: 113 N--ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
N + + + +YR PEL+ G +Y ID+W AGC++AE+ P+ G + QL I
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 243
Query: 171 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMP----PEAVDLVSRLLQYSPN 226
++ G+ T E ++ NY ++ ++ K+ + P A+DL+ +LL P
Sbjct: 244 QLCGSITPEVWPNVD-NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 302
Query: 227 LRSTALEALIHPFF 240
R + +AL H FF
Sbjct: 303 QRIDSDDALNHDFF 316
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 22/254 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTE-----KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 55
++LL H NVV+L + K +YL V ++ + ++ + + + L
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYL--VFDFCEHDLAGLLSN---VLVKFTLS 125
Query: 56 YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV---KGEP 112
+K + L YIH + HRD+K N+L+ LKL DFG A+ +P
Sbjct: 126 EIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQP 183
Query: 113 N--ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
N + + + +YR PEL+ G +Y ID+W AGC++AE+ P+ G + QL I
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 243
Query: 171 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMP----PEAVDLVSRLLQYSPN 226
++ G+ T E ++ NY ++ ++ K+ + P A+DL+ +LL P
Sbjct: 244 QLCGSITPEVWPNVD-NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 302
Query: 227 LRSTALEALIHPFF 240
R + +AL H FF
Sbjct: 303 QRIDSDDALNHDFF 316
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 40/245 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVKL 59
M+ LDHPN++ L F T+ +YL + L E RV+ K ++ S ++
Sbjct: 77 MKSLDHPNIIRLYETFEDNTD---IYLVMELCTGGELFERVVHKRVFRESDAARIMK--- 130
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLL--VNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ A+AY H + V HRD+KP+N L + LKL DFG A G+ + +
Sbjct: 131 ---DVLSAVAYCHK-LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV 186
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ YY +P+++ G Y D WSAG ++ LL G P F + + +++I + GT
Sbjct: 187 GTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT-- 240
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
F FP+ W + P+A L+ RLL SP R T+L+AL H
Sbjct: 241 -------------FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQALEH 279
Query: 238 PFFDE 242
+F++
Sbjct: 280 EWFEK 284
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 22/254 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTE-----KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 55
++LL H NVV+L + K +YL V ++ + ++ + + + L
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKASIYL--VFDFCEHDLAGLLSN---VLVKFTLS 125
Query: 56 YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV---KGEP 112
+K + L YIH + HRD+K N+L+ LKL DFG A+ +P
Sbjct: 126 EIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQP 183
Query: 113 N--ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
N + + + +YR PEL+ G +Y ID+W AGC++AE+ P+ G + QL I
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 243
Query: 171 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMP----PEAVDLVSRLLQYSPN 226
++ G+ T E ++ NY ++ ++ K+ + P A+DL+ +LL P
Sbjct: 244 QLCGSITPEVWPNVD-NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 302
Query: 227 LRSTALEALIHPFF 240
R + +AL H FF
Sbjct: 303 QRIDSDDALNHDFF 316
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 40/245 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVKL 59
M+ LDHPN++ L F T+ +YL + L E RV+ K ++ S ++
Sbjct: 60 MKSLDHPNIIRLYETFEDNTD---IYLVMELCTGGELFERVVHKRVFRESDAARIMK--- 113
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLL--VNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ A+AY H + V HRD+KP+N L + LKL DFG A G+ + +
Sbjct: 114 ---DVLSAVAYCHK-LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV 169
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ YY +P+++ G Y D WSAG ++ LL G P F + + +++I + GT
Sbjct: 170 GTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT-- 223
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
F FP+ W + P+A L+ RLL SP R T+L+AL H
Sbjct: 224 -------------FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQALEH 262
Query: 238 PFFDE 242
+F++
Sbjct: 263 EWFEK 267
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 43/227 (18%)
Query: 54 LIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL---------------------VNPH 92
L +++ YQIC+++ ++H+ + H D+KP+N+L +NP
Sbjct: 117 LDHIRKMAYQICKSVNFLHSN-KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP- 174
Query: 93 THQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLL 152
+K+ DFGSA E + + + R+YRAPE+I A ++ D+WS GC+L E L
Sbjct: 175 --DIKVVDFGSATY--DDEHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYL 229
Query: 153 GQPLFPGESGVDQLVEIIKVLG---------TPTREEIKCMNPNYTEFKFPQIKAHPWHK 203
G +FP + L + ++LG T R+ ++ E K
Sbjct: 230 GFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACK 289
Query: 204 IFQKRMPPEAV------DLVSRLLQYSPNLRSTALEALIHPFFDELR 244
++ M + V DL+ ++L+Y P R T EAL HPFFD L+
Sbjct: 290 PLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLK 336
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 42/243 (17%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
++ LDHPN++ L F +D+ Y LV E E +I +R +
Sbjct: 80 LKQLDHPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISR-----KRFSEVDAA 129
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISY 116
Q+ + Y+H + HRD+KP+NLL+ + +++ DFG + +
Sbjct: 130 RIIRQVLSGITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 188
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
I + YY APE++ G Y D+WS G +L LL G P F G + D L ++ K
Sbjct: 189 IGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK----- 241
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
YT F+ PQ W K++ A DL+ ++L Y P++R +A +AL
Sbjct: 242 ---------GKYT-FELPQ-----W-----KKVSESAKDLIRKMLTYVPSMRISARDALD 281
Query: 237 HPF 239
H +
Sbjct: 282 HEW 284
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 42/243 (17%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
++ LDHPN++ L F +D+ Y LV E E +I +R +
Sbjct: 104 LKQLDHPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISR-----KRFSEVDAA 153
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISY 116
Q+ + Y+H + HRD+KP+NLL+ + +++ DFG + +
Sbjct: 154 RIIRQVLSGITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 212
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
I + YY APE++ G Y D+WS G +L LL G P F G + D L ++ K
Sbjct: 213 IGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK----- 265
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
YT F+ PQ W K++ A DL+ ++L Y P++R +A +AL
Sbjct: 266 ---------GKYT-FELPQ-----W-----KKVSESAKDLIRKMLTYVPSMRISARDALD 305
Query: 237 HPF 239
H +
Sbjct: 306 HEW 308
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 42/243 (17%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
++ LDHPN++ L F +D+ Y LV E E +I +R +
Sbjct: 103 LKQLDHPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISR-----KRFSEVDAA 152
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISY 116
Q+ + Y+H + HRD+KP+NLL+ + +++ DFG + +
Sbjct: 153 RIIRQVLSGITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 211
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
I + YY APE++ G Y D+WS G +L LL G P F G + D L ++ K
Sbjct: 212 IGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK----- 264
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
YT F+ PQ W K++ A DL+ ++L Y P++R +A +AL
Sbjct: 265 ---------GKYT-FELPQ-----W-----KKVSESAKDLIRKMLTYVPSMRISARDALD 304
Query: 237 HPF 239
H +
Sbjct: 305 HEW 307
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 42/243 (17%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
++ LDHPN++ L F +D+ Y LV E E +I +R +
Sbjct: 86 LKQLDHPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISR-----KRFSEVDAA 135
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISY 116
Q+ + Y+H + HRD+KP+NLL+ + +++ DFG + +
Sbjct: 136 RIIRQVLSGITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 194
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
I + YY APE++ G Y D+WS G +L LL G P F G + D L ++ K
Sbjct: 195 IGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK----- 247
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
YT F+ PQ W K++ A DL+ ++L Y P++R +A +AL
Sbjct: 248 ---------GKYT-FELPQ-----W-----KKVSESAKDLIRKMLTYVPSMRISARDALD 287
Query: 237 HPF 239
H +
Sbjct: 288 HEW 290
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 109/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F +T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 65 LRHPNILRLYGYFHDSTR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 115
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y
Sbjct: 116 ELANALSYCHSK-KVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDY 172
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + D I +V
Sbjct: 173 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV---------- 221
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 222 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 92/190 (48%), Gaps = 33/190 (17%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPH-THQLKLCDFGSAKVLVKGEPNISYICSR- 120
QI AL Y+HN G+CHRDIKP+N L + + + ++KL DFG +K K Y +
Sbjct: 176 QIFSALHYLHNQ-GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTK 234
Query: 121 ----YYRAPELIFGATE-YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
Y+ APE++ E Y D WSAG +L LL+G FPG + D + +++
Sbjct: 235 AGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN---- 290
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
+++ NPNY + P A DL+S LL + + R A+ AL
Sbjct: 291 ---KKLCFENPNYN------------------VLSPLARDLLSNLLNRNVDERFDAMRAL 329
Query: 236 IHPFFDELRD 245
HP+ + D
Sbjct: 330 QHPWISQFSD 339
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 115/241 (47%), Gaps = 42/241 (17%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYF 61
L HPN++ LK F + TE ++LVLE V E R+++ Y S+R VK
Sbjct: 105 LSHPNIIKLKEIFETPTE-----ISLVLELVTGGELFDRIVEKGY-YSERDAADAVK--- 155
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLL-VNPHTHQ-LKLCDFGSAKVLVKGEPNISYICS 119
QI A+AY+H G+ HRD+KP+NLL P LK+ DFG +K+ V+ + + +C
Sbjct: 156 -QILEAVAYLHEN-GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI-VEHQVLMKTVCG 212
Query: 120 R-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
Y APE++ G Y +D+WS G + LL G F E G DQ + R
Sbjct: 213 TPGYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERG-DQFM---------FR 261
Query: 179 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHP 238
+ C E+ F PW + A DLV +L+ P R T +AL HP
Sbjct: 262 RILNC------EYYF----ISPWW----DEVSLNAKDLVRKLIVLDPKKRLTTFQALQHP 307
Query: 239 F 239
+
Sbjct: 308 W 308
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 68 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 118
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y
Sbjct: 119 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDY 175
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 176 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 224
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 225 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 91 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 141
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y
Sbjct: 142 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDY 198
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 199 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 247
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 248 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 114/261 (43%), Gaps = 41/261 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ LDHPN++ L F + Y+ L E +IK + S+ +K
Sbjct: 75 LKKLDHPNIMKL---FEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIK-- 128
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYIC 118
Q+ + Y+H + HRD+KP+N+L+ +K+ DFG + + I
Sbjct: 129 --QVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG 185
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+ YY APE++ G Y D+WSAG +L LL G P F G++ D L
Sbjct: 186 TAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL------------ 231
Query: 179 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHP 238
K + F PQ W I +A DL+ ++L + P+LR TA + L HP
Sbjct: 232 ---KRVETGKYAFDLPQ-----WRTI-----SDDAKDLIRKMLTFHPSLRITATQCLEHP 278
Query: 239 FFDELRDPNTRLPNGRFLPPL 259
+ ++ ++ P LP L
Sbjct: 279 W---IQKYSSETPTISDLPSL 296
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 106/241 (43%), Gaps = 38/241 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ LDHPN++ L F + Y+ L E +IK + S+ +K
Sbjct: 75 LKKLDHPNIMKL---FEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIK-- 128
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYIC 118
Q+ + Y+H + HRD+KP+N+L+ +K+ DFG + + I
Sbjct: 129 --QVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG 185
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+ YY APE++ G Y D+WSAG +L LL G P F G++ D L
Sbjct: 186 TAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL------------ 231
Query: 179 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHP 238
K + F PQ W I +A DL+ ++L + P+LR TA + L HP
Sbjct: 232 ---KRVETGKYAFDLPQ-----WRTI-----SDDAKDLIRKMLTFHPSLRITATQCLEHP 278
Query: 239 F 239
+
Sbjct: 279 W 279
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 64 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 114
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y
Sbjct: 115 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDY 171
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 172 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 220
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 221 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 106/241 (43%), Gaps = 38/241 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ LDHPN++ L F + Y+ L E +IK + S+ +K
Sbjct: 75 LKKLDHPNIMKL---FEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIK-- 128
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYIC 118
Q+ + Y+H + HRD+KP+N+L+ +K+ DFG + + I
Sbjct: 129 --QVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG 185
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+ YY APE++ G Y D+WSAG +L LL G P F G++ D L
Sbjct: 186 TAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL------------ 231
Query: 179 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHP 238
K + F PQ W I +A DL+ ++L + P+LR TA + L HP
Sbjct: 232 ---KRVETGKYAFDLPQ-----WRTI-----SDDAKDLIRKMLTFHPSLRITATQCLEHP 278
Query: 239 F 239
+
Sbjct: 279 W 279
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 82 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 132
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y
Sbjct: 133 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDY 189
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 190 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 238
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 239 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 276
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 68 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 118
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y
Sbjct: 119 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDY 175
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 176 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 224
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 225 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 70 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 120
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y
Sbjct: 121 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDY 177
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 178 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 226
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 227 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 62 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 112
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y
Sbjct: 113 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDY 169
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 170 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 218
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 219 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 69 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 119
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y
Sbjct: 120 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDY 176
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 177 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 225
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 226 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 65 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 115
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y
Sbjct: 116 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDY 172
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 173 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 221
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 222 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 65 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 115
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y
Sbjct: 116 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDY 172
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 173 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 221
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 222 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 70 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 120
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + Y
Sbjct: 121 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDY 177
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 178 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 226
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 227 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 65 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 115
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + Y
Sbjct: 116 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDY 172
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 173 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 221
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 222 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 106/243 (43%), Gaps = 42/243 (17%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
++ LDHPN+ L F +D+ Y LV E E +I +R +
Sbjct: 80 LKQLDHPNIXKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISR-----KRFSEVDAA 129
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISY 116
Q+ + Y H + HRD+KP+NLL+ + +++ DFG + +
Sbjct: 130 RIIRQVLSGITYXHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK 188
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
I + YY APE++ G Y D+WS G +L LL G P F G + D L ++ K
Sbjct: 189 IGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK----- 241
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
YT F+ PQ W K++ A DL+ + L Y P+ R +A +AL
Sbjct: 242 ---------GKYT-FELPQ-----W-----KKVSESAKDLIRKXLTYVPSXRISARDALD 281
Query: 237 HPF 239
H +
Sbjct: 282 HEW 284
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 66 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 116
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + Y
Sbjct: 117 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDY 173
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 174 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 222
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 223 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 68 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 118
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y
Sbjct: 119 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDY 175
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 176 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 224
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 225 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 65 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 115
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + Y
Sbjct: 116 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDY 172
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 173 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 221
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 222 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 65 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 115
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + Y
Sbjct: 116 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTXLCGTLDY 172
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 173 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 221
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 222 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 65 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 115
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + Y
Sbjct: 116 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTELCGTLDY 172
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 173 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 221
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 222 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 66 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 116
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y
Sbjct: 117 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRDTLCGTLDY 173
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 174 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 222
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 223 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 70 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 120
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y
Sbjct: 121 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDY 177
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 178 LPPEXIEGRX-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 226
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 227 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPXLREVLEHPW 264
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 65 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 115
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + Y
Sbjct: 116 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDY 172
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 173 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 221
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 222 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 68 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 118
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + Y
Sbjct: 119 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDY 175
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 176 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 224
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 225 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 91 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 141
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + Y
Sbjct: 142 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRDDLCGTLDY 198
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 199 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 247
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 248 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 67 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 117
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + Y
Sbjct: 118 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDY 174
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 175 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 223
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 224 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 125/260 (48%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 87 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 138
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K S++
Sbjct: 139 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFV 196
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 197 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 250
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 251 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 282
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 283 MEGYGPLKAHPFFESVTWEN 302
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 68 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 118
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + Y
Sbjct: 119 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRDDLCGTLDY 175
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 176 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 224
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 225 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 125/260 (48%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 83 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 134
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K S++
Sbjct: 135 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFV 192
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 193 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 246
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 247 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 278
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 279 MEGYGPLKAHPFFESVTWEN 298
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 57/244 (23%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 66 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 116
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-------SAKVLVKGEPNIS 115
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG S + + G +
Sbjct: 117 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWSCHAPSSRRTTLSGTLD-- 172
Query: 116 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
Y PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 173 ------YLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--- 222
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
EF FP + A DL+SRLL+++P+ R E L
Sbjct: 223 --------------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVL 256
Query: 236 IHPF 239
HP+
Sbjct: 257 EHPW 260
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 37/227 (16%)
Query: 50 QRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLV---------NPHTH------ 94
Q PL +V+ YQ+C AL ++H + H D+KP+N+L N H
Sbjct: 118 QPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 176
Query: 95 ---QLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+++ DFGSA E + + + +R+YR PE+I + D+WS GC+L E
Sbjct: 177 KNTSIRVADFGSATF--DHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYY 233
Query: 152 LGQPLFPGESGVDQLVEIIKVLG-------TPTREEIK------CMNPNYTEFKFPQIKA 198
G LF + LV + K+LG TR++ + N ++ ++ +
Sbjct: 234 RGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENC 293
Query: 199 HPWHK-IFQKRMPP-EAVDLVSRLLQYSPNLRSTALEALIHPFFDEL 243
P + Q + + DL+ R+L++ P R T EAL+HPFF L
Sbjct: 294 KPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 37/227 (16%)
Query: 50 QRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLV---------NPHTH------ 94
Q PL +V+ YQ+C AL ++H + H D+KP+N+L N H
Sbjct: 127 QPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 185
Query: 95 ---QLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+++ DFGSA E + + + +R+YR PE+I + D+WS GC+L E
Sbjct: 186 KNTSIRVADFGSATF--DHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYY 242
Query: 152 LGQPLFPGESGVDQLVEIIKVLG-------TPTREEIK------CMNPNYTEFKFPQIKA 198
G LF + LV + K+LG TR++ + N ++ ++ +
Sbjct: 243 RGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENC 302
Query: 199 HPWHK-IFQKRMPP-EAVDLVSRLLQYSPNLRSTALEALIHPFFDEL 243
P + Q + + DL+ R+L++ P R T EAL+HPFF L
Sbjct: 303 KPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 349
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 118/247 (47%), Gaps = 41/247 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
++ LDHPN++ + F +D + +V+E E + R++ + + + YV
Sbjct: 74 LKSLDHPNIIKIFEVF-----EDYHNMYIVMETCEGGELLERIVSAQAR-GKALSEGYVA 127
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLL---VNPHTHQLKLCDFGSAKVLVKGEPNIS 115
Q+ ALAY H+ V H+D+KP+N+L +PH+ +K+ DFG A++ E + +
Sbjct: 128 ELMKQMMNALAYFHSQ-HVVHKDLKPENILFQDTSPHS-PIKIIDFGLAELFKSDEHSTN 185
Query: 116 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ Y APE+ + T DIWSAG V+ LL G F G S L E+
Sbjct: 186 AAGTALYMAPEVF--KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTS----LEEV------ 233
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
+++ PNY ++ P + P+AVDL+ ++L P R +A + L
Sbjct: 234 --QQKATYKEPNYA------VECRP--------LTPQAVDLLKQMLTKDPERRPSAAQVL 277
Query: 236 IHPFFDE 242
H +F +
Sbjct: 278 HHEWFKQ 284
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 37/227 (16%)
Query: 50 QRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLV---------NPHTH------ 94
Q PL +V+ YQ+C AL ++H + H D+KP+N+L N H
Sbjct: 150 QPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 208
Query: 95 ---QLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+++ DFGSA E + + + +R+YR PE+I + D+WS GC+L E
Sbjct: 209 KNTSIRVADFGSATF--DHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYY 265
Query: 152 LGQPLFPGESGVDQLVEIIKVLG-------TPTREEIK------CMNPNYTEFKFPQIKA 198
G LF + LV + K+LG TR++ + N ++ ++ +
Sbjct: 266 RGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENC 325
Query: 199 HPWHK-IFQKRMPP-EAVDLVSRLLQYSPNLRSTALEALIHPFFDEL 243
P + Q + + DL+ R+L++ P R T EAL+HPFF L
Sbjct: 326 KPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 372
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 68 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 118
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ +FG + V + + Y
Sbjct: 119 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIANFGWS-VHAPSSRRTTLCGTLDY 175
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 176 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 224
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 225 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L CF + ++LY L E ++K+ K+ + Y
Sbjct: 91 MSRLDHPFFVKLYFCF---QDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 142
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++
Sbjct: 143 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFV 200
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 201 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 254
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 255 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 286
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 287 MEGYGPLKAHPFFESVTWEN 306
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ + ++ Y+
Sbjct: 69 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSRFDEQRTATYIT---- 119
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ + +LK+ DFG + V + + Y
Sbjct: 120 ELANALSYCHSK-RVIHRDIKPENLLLGSNG-ELKIADFGWS-VHAPSSRRTTLCGTLDY 176
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G P F + + I +V
Sbjct: 177 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV---------- 225
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++ + R T E L HP+
Sbjct: 226 -------EFTFPDF------------VTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ K ++ Y+
Sbjct: 67 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---- 117
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ +FG + V + + Y
Sbjct: 118 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIANFGWS-VHAPSSRRTTLCGTLDY 174
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 175 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 223
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 224 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 81/162 (50%), Gaps = 10/162 (6%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
++ L+HPNV+ F E LN+VLE + R+IKH K + +P V
Sbjct: 86 LKQLNHPNVIKYYASFIEDNE-----LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWK 140
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL-VKGEPNISYIC 118
YF Q+C AL ++H+ V HRDIKP N+ + T +KL D G + K S +
Sbjct: 141 YFVQLCSALEHMHSR-RVMHRDIKPANVFITA-TGVVKLGDLGLGRFFSSKTTAAHSLVG 198
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGE 160
+ YY +PE I Y DIWS GC+L E+ Q F G+
Sbjct: 199 TPYYMSPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 107/239 (44%), Gaps = 42/239 (17%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
++ LDHPN++ L F +D+ Y LV E+ E ++I H K + +K
Sbjct: 100 LKSLDHPNIIKLFDVF-----EDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMK 153
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H + HRDIKP+N+L+ +K+ DFG + K
Sbjct: 154 ----QILSGICYLHKH-NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR 208
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + YY APE++ +Y D+WS G ++ LL G P F G++ D + ++ K
Sbjct: 209 LGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK----- 261
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
Y +F + W K + EA +L+ +L Y N R TA EAL
Sbjct: 262 --------GKYYFDF-------NDW-----KNISDEAKELIKLMLTYDYNKRCTAEEAL 300
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 125/260 (48%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 84 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 135
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K +++
Sbjct: 136 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANAFV 193
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 194 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 247
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 248 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 279
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 280 MEGYGPLKAHPFFESVTWEN 299
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 37/225 (16%)
Query: 53 PLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQL---------------- 96
P+ V+ +Q+C+A+ ++H+ + H D+KP+N+L ++L
Sbjct: 135 PIHQVRHMAFQLCQAVKFLHDN-KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKST 193
Query: 97 --KLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
++ DFGSA E + + + +R+YRAPE+I ++ D+WS GC++ E +G
Sbjct: 194 AVRVVDFGSATF--DHEHHSTIVSTRHYRAPEVIL-ELGWSQPCDVWSIGCIIFEYYVGF 250
Query: 155 PLFPGESGVDQLVEIIKVLG-TPTREEIKC------------MNPNYTEFKFPQIKAHPW 201
LF + L + ++LG P+R K + N + ++ + P
Sbjct: 251 TLFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPL 310
Query: 202 HKIFQKRMPP--EAVDLVSRLLQYSPNLRSTALEALIHPFFDELR 244
+ + DL+ +L+Y P R T EAL HPFF LR
Sbjct: 311 RRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFARLR 355
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 86 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 137
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++
Sbjct: 138 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFV 195
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 196 GTAQYVSPELL---TEKSAXKSSDLWALGCIIYQLVAGLP--PFRAGNEGLIFAKIIKL- 249
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 250 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 281
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 282 MEGYGPLKAHPFFESVTWEN 301
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 125/260 (48%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L Y ++K+ K+ + Y
Sbjct: 86 MSRLDHPFFVKL---YFTFQDDEKLYFGL--SYAKNGC--LLKYIRKIGS-FDETCTRFY 137
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K S++
Sbjct: 138 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFV 195
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 196 GTAQYVSPELL---TEKSASKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 249
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 250 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 281
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 282 MEGYGPLKAHPFFESVTWEN 301
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 86 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 137
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++
Sbjct: 138 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFV 195
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 196 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEGLIFAKIIKL- 249
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 250 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 281
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 282 MEGYGPLKAHPFFESVTWEN 301
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P TV+R ++ + ++ Y+
Sbjct: 69 LRHPNILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSRFDEQRTATYIT---- 119
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ + +LK+ DFG + V + + Y
Sbjct: 120 ELANALSYCHSK-RVIHRDIKPENLLLGSNG-ELKIADFGWS-VHAPSSRRDTLCGTLDY 176
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G P F + + I +V
Sbjct: 177 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV---------- 225
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++ + R T E L HP+
Sbjct: 226 -------EFTFPDF------------VTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 13/151 (8%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
+ P +V F+S E +++ +E++ ++ +V+K ++R+P +
Sbjct: 72 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKE----AKRIPEEILGKVSIA 122
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR 123
+ R LAY+ + HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y
Sbjct: 123 VLRGLAYLREKHQIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYM 180
Query: 124 APELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
APE + G T Y+ DIWS G L EL +G+
Sbjct: 181 APERLQG-THYSVQSDIWSMGLSLVELAVGR 210
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P V++ ++ K ++ Y+
Sbjct: 70 LRHPNILRLYGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYIT---- 120
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y
Sbjct: 121 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDY 177
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 178 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 226
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 227 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 84 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 135
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++
Sbjct: 136 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFV 193
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 194 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 247
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 248 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 279
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 280 MEGYGPLKAHPFFESVTWEN 299
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 84 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 135
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++
Sbjct: 136 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFV 193
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 194 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 247
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 248 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 279
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 280 MEGYGPLKAHPFFESVTWEN 299
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 84 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 135
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++
Sbjct: 136 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFV 193
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 194 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 247
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 248 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 279
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 280 MEGYGPLKAHPFFESVTWEN 299
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 112/282 (39%), Gaps = 57/282 (20%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR +D P V+ F E + + +E + ++ + K Q +P +
Sbjct: 104 MRTVDCPFTVTFYGALFR-----EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKI 158
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
I +AL ++H+ + V HRD+KP N+L+N Q+K+CDFG + LV +
Sbjct: 159 AVSIVKALEHLHSKLSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDSVAKTIDAGCK 217
Query: 121 YYRAPELI---FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
Y APE I Y+ DIWS G + EL + + FP +S GTP
Sbjct: 218 PYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR--FPYDS-----------WGTPF 264
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
++ Q+ P ++ + E VD S+ L+ + R T E + H
Sbjct: 265 QQ-------------LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311
Query: 238 PFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI 279
PF F HE KG V VKLI
Sbjct: 312 PF----------------------FTLHESKGTDVASFVKLI 331
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 86 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 137
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++
Sbjct: 138 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFV 195
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 196 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 249
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 250 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 281
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 282 MEGYGPLKAHPFFESVTWEN 301
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 40/244 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ + H N+V+L+ + STT YL + L E R+++ + L+
Sbjct: 60 LKKIKHENIVTLEDIYESTTH---YYLVMQLVSGGELFDRILERGVYTEKDASLV----- 111
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLL-VNPHTH-QLKLCDFGSAKVLVKGEPNISYIC 118
Q+ A+ Y+H G+ HRD+KP+NLL + P + ++ + DFG +K+ G +S C
Sbjct: 112 IQQVLSAVKYLHEN-GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--IMSTAC 168
Query: 119 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
Y APE + Y+ A+D WS G + LL G P F E+ +L E IK
Sbjct: 169 GTPGYVAPE-VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-SKLFEKIK------ 220
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
Y EF+ P F + A D + LL+ PN R T +AL H
Sbjct: 221 --------EGYYEFESP----------FWDDISESAKDFICHLLEKDPNERYTCEKALSH 262
Query: 238 PFFD 241
P+ D
Sbjct: 263 PWID 266
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 86 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 137
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++
Sbjct: 138 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFV 195
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 196 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 249
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 250 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 281
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 282 MEGYGPLKAHPFFESVTWEN 301
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 86 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 137
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++
Sbjct: 138 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFV 195
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 196 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 249
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 250 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 281
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 282 MEGYGPLKAHPFFESVTWEN 301
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 87 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 138
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++
Sbjct: 139 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFV 196
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 197 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 250
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 251 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 282
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 283 MEGYGPLKAHPFFESVTWEN 302
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 110/241 (45%), Gaps = 38/241 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ LDHPN++ L F +K YL + + E +I + Q+ + +
Sbjct: 75 LKQLDHPNIMKLYEFF---EDKRNYYLVMEVYRGGELFDEII-----LRQKFSEVDAAVI 126
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYIC 118
Q+ Y+H + HRD+KP+NLL+ + +K+ DFG + G +
Sbjct: 127 MKQVLSGTTYLHKH-NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLG 185
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+ YY APE++ +Y D+WS G +L LL G P F G++ DQ EI+K + +
Sbjct: 186 TAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQT--DQ--EILKRV---EK 236
Query: 179 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHP 238
+ P++T+ + EA LV +L Y P+ R +A EAL HP
Sbjct: 237 GKFSFDPPDWTQ------------------VSDEAKQLVKLMLTYEPSKRISAEEALNHP 278
Query: 239 F 239
+
Sbjct: 279 W 279
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 83 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 134
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++
Sbjct: 135 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFV 192
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 193 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 246
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 247 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 278
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 279 MEGYGPLKAHPFFESVTWEN 298
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 61 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 112
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++
Sbjct: 113 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFV 170
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 171 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 224
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 225 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 256
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 257 MEGYGPLKAHPFFESVTWEN 276
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 62 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 113
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++
Sbjct: 114 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFV 171
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 172 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 225
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 226 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 257
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 258 MEGYGPLKAHPFFESVTWEN 277
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 68 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 119
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++
Sbjct: 120 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFV 177
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 178 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 231
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 232 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 263
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 264 MEGYGPLKAHPFFESVTWEN 283
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 63 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 114
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++
Sbjct: 115 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFV 172
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 173 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 226
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 227 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 258
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 259 MEGYGPLKAHPFFESVTWEN 278
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 64 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 115
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++
Sbjct: 116 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFV 173
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 174 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 227
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP+ K F P+A DLV +L L + L
Sbjct: 228 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 259
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 260 MEGYGPLKAHPFFESVTWEN 279
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 110/241 (45%), Gaps = 38/241 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ LDHPN++ L F +K YL + + E +I + Q+ + +
Sbjct: 58 LKQLDHPNIMKLYEFF---EDKRNYYLVMEVYRGGELFDEII-----LRQKFSEVDAAVI 109
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYIC 118
Q+ Y+H + HRD+KP+NLL+ + +K+ DFG + G +
Sbjct: 110 MKQVLSGTTYLHKH-NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLG 168
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+ YY APE++ +Y D+WS G +L LL G P F G++ DQ EI+K + +
Sbjct: 169 TAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQT--DQ--EILKRV---EK 219
Query: 179 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHP 238
+ P++T+ + EA LV +L Y P+ R +A EAL HP
Sbjct: 220 GKFSFDPPDWTQ------------------VSDEAKQLVKLMLTYEPSKRISAEEALNHP 261
Query: 239 F 239
+
Sbjct: 262 W 262
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 106/237 (44%), Gaps = 43/237 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ L F T + L+LEY P V++ ++ K ++ Y+
Sbjct: 70 LRHPNILRLYGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYIT---- 120
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL+Y H+ V HRDIKP+NLL+ +LK+ DFG + V + Y
Sbjct: 121 ELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLXGTLDY 177
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 178 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------- 226
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF FP + A DL+SRLL+++P+ R E L HP+
Sbjct: 227 -------EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 81/186 (43%), Gaps = 29/186 (15%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEP-NIS 115
+ Y QI L Y+H+ + HRDIK N+L+N ++ LK+ DFG++K L P +
Sbjct: 124 IGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182
Query: 116 YICSRYYRAPELIF-GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
+ + Y APE+I G Y A DIWS GC + E+ G+P F
Sbjct: 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF----------------- 225
Query: 175 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
+ P FK K HP + M EA + + + P+ R+ A +
Sbjct: 226 ------YELGEPQAAMFKVGMFKVHPE---IPESMSAEAKAFILKCFEPDPDKRACANDL 276
Query: 235 LIHPFF 240
L+ F
Sbjct: 277 LVDEFL 282
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 115/283 (40%), Gaps = 59/283 (20%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR +D P V+ F + + + +E + ++ + K Q +P +
Sbjct: 60 MRTVDCPFTVTFYGALFREGD-----VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKI 114
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-EPNISYICS 119
I +AL ++H+ + V HRD+KP N+L+N Q+K+CDFG + LV +I C
Sbjct: 115 AVSIVKALEHLHSKLSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDDVAKDIDAGC- 172
Query: 120 RYYRAPELI---FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ Y APE I Y+ DIWS G + EL + + FP +S GTP
Sbjct: 173 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR--FPYDS-----------WGTP 219
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
++ Q+ P ++ + E VD S+ L+ + R T E +
Sbjct: 220 FQQ-------------LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
Query: 237 HPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI 279
HPF F HE KG V VKLI
Sbjct: 267 HPF----------------------FTLHESKGTDVASFVKLI 287
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 11/161 (6%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+RLL HP+++ L S KDE+ + V+EY + I KMS++ + +
Sbjct: 58 LRLLRHPHIIKLYDVIKS---KDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRF 108
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
F QI A+ Y H + HRD+KP+NLL++ H + +K+ DFG + ++ G + S
Sbjct: 109 FQQIISAVEYCHRH-KIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSP 166
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
Y APE+I G +D+WS G +L +L + F ES
Sbjct: 167 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 207
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 81/186 (43%), Gaps = 29/186 (15%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEP-NIS 115
+ Y QI L Y+H+ + HRDIK N+L+N ++ LK+ DFG++K L P +
Sbjct: 110 IGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 168
Query: 116 YICSRYYRAPELIF-GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
+ + Y APE+I G Y A DIWS GC + E+ G+P F
Sbjct: 169 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF----------------- 211
Query: 175 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
+ P FK K HP + M EA + + + P+ R+ A +
Sbjct: 212 ------YELGEPQAAMFKVGMFKVHPE---IPESMSAEAKAFILKCFEPDPDKRACANDL 262
Query: 235 LIHPFF 240
L+ F
Sbjct: 263 LVDEFL 268
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 11/161 (6%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+RLL HP+++ L S KDE+ + V+EY + I KMS++ + +
Sbjct: 68 LRLLRHPHIIKLYDVIKS---KDEIIM--VIEYAGNELFDYIVQRDKMSEQ----EARRF 118
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
F QI A+ Y H + HRD+KP+NLL++ H + +K+ DFG + ++ G + S
Sbjct: 119 FQQIISAVEYCHRH-KIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSP 176
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
Y APE+I G +D+WS G +L +L + F ES
Sbjct: 177 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 217
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 11/161 (6%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+RLL HP+++ L S KDE+ + V+EY + I KMS++ + +
Sbjct: 62 LRLLRHPHIIKLYDVIKS---KDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRF 112
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
F QI A+ Y H + HRD+KP+NLL++ H + +K+ DFG + ++ G + S
Sbjct: 113 FQQIISAVEYCHRH-KIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSP 170
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
Y APE+I G +D+WS G +L +L + F ES
Sbjct: 171 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 211
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 11/161 (6%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+RLL HP+++ L S KDE+ + V+EY + I KMS++ + +
Sbjct: 67 LRLLRHPHIIKLYDVIKS---KDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRF 117
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
F QI A+ Y H + HRD+KP+NLL++ H + +K+ DFG + ++ G + S
Sbjct: 118 FQQIISAVEYCHRH-KIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSP 175
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
Y APE+I G +D+WS G +L +L + F ES
Sbjct: 176 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 121/260 (46%), Gaps = 57/260 (21%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M LDHP V L +F+ + ++LY L E ++K+ K+ + Y
Sbjct: 89 MSRLDHPFFVKL---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFY 140
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
+I AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++
Sbjct: 141 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFV 198
Query: 118 CSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVL 173
+ Y +PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 199 GTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL- 252
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL--LQYSPNLRSTA 231
E+ FP P+A DLV +L L + L
Sbjct: 253 ----------------EYDFPAA------------FFPKARDLVEKLLVLDATKRLGCEE 284
Query: 232 LEAL----IHPFFDELRDPN 247
+E HPFF+ + N
Sbjct: 285 MEGYGPLKAHPFFESVTWEN 304
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 113/260 (43%), Gaps = 43/260 (16%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
LD+P+VV H FF +D+ ++ +VLE R + +K + + + + Q
Sbjct: 99 LDNPHVVGF-HGFF----EDDDFVYVVLEIC---RRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSRYY 122
+ + Y+HN V HRD+K NL +N +K+ DFG + K+ GE + + Y
Sbjct: 151 TIQGVQYLHNN-RVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKTLCGTPNY 208
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
APE + ++ +DIWS GC+L LL+G+P F E
Sbjct: 209 IAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------ETS 245
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDE 242
C+ Y K + P H + P A L+ R+L P LR + E L FF
Sbjct: 246 CLKETYIRIKKNEYSV-PRH------INPVASALIRRMLHADPTLRPSVAELLTDEFFTS 298
Query: 243 LRDPNTRLPNGRF-LPPLFN 261
P RLP +PP F+
Sbjct: 299 GYAP-MRLPTSCLTVPPRFS 317
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 112/260 (43%), Gaps = 43/260 (16%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
LD+P+VV H FF +D+ ++ +VLE R + +K + + + + Q
Sbjct: 83 LDNPHVVGF-HGFF----EDDDFVYVVLEIC---RRRSLLELHKRRKAVTEPEARYFMRQ 134
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSRYY 122
+ + Y+HN V HRD+K NL +N +K+ DFG + K+ GE + Y
Sbjct: 135 TIQGVQYLHNN-RVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKDLCGTPNY 192
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
APE + ++ +DIWS GC+L LL+G+P F E
Sbjct: 193 IAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------ETS 229
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDE 242
C+ Y K + P H + P A L+ R+L P LR + E L FF
Sbjct: 230 CLKETYIRIKKNEYSV-PRH------INPVASALIRRMLHADPTLRPSVAELLTDEFFTS 282
Query: 243 LRDPNTRLPNGRF-LPPLFN 261
P RLP +PP F+
Sbjct: 283 GYAP-MRLPTSCLTVPPRFS 301
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 112/260 (43%), Gaps = 43/260 (16%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
LD+P+VV H FF +D+ ++ +VLE R + +K + + + + Q
Sbjct: 99 LDNPHVVGF-HGFF----EDDDFVYVVLEIC---RRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSRYY 122
+ + Y+HN V HRD+K NL +N +K+ DFG + K+ GE + Y
Sbjct: 151 TIQGVQYLHNN-RVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKDLCGTPNY 208
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
APE + ++ +DIWS GC+L LL+G+P F E
Sbjct: 209 IAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------ETS 245
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDE 242
C+ Y K + P H + P A L+ R+L P LR + E L FF
Sbjct: 246 CLKETYIRIKKNEYSV-PRH------INPVASALIRRMLHADPTLRPSVAELLTDEFFTS 298
Query: 243 LRDPNTRLPNGRF-LPPLFN 261
P RLP +PP F+
Sbjct: 299 GYAP-MRLPTSCLTVPPRFS 317
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 112/259 (43%), Gaps = 40/259 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
M L HP +++L F +D+ + L+LE++ E R+ YKMS+ + Y++
Sbjct: 102 MNQLHHPKLINLHDAF-----EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR 156
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLV-NPHTHQLKLCDFGSAKVLVKGEPNISYI 117
Q C L ++H + H DIKP+N++ +K+ DFG A L E
Sbjct: 157 ----QACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT 211
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ + APE++ D+W+ G + LL G F GE ++ L
Sbjct: 212 ATAEFAAPEIV-DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL----------- 259
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
+ +K + + E F + PEA D + LLQ P R T +AL H
Sbjct: 260 -QNVKRCDWEFDEDAFSSVS-------------PEAKDFIKNLLQKEPRKRLTVHDALEH 305
Query: 238 PFF-DELRDPNTRLPNGRF 255
P+ + + +R+P+ R+
Sbjct: 306 PWLKGDHSNLTSRIPSSRY 324
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 112/260 (43%), Gaps = 43/260 (16%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
LD+P+VV H FF +D+ ++ +VLE R + +K + + + + Q
Sbjct: 99 LDNPHVVGF-HGFF----EDDDFVYVVLEIC---RRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSRYY 122
+ + Y+HN V HRD+K NL +N +K+ DFG + K+ GE + Y
Sbjct: 151 TIQGVQYLHNN-RVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKXLCGTPNY 208
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
APE + ++ +DIWS GC+L LL+G+P F E
Sbjct: 209 IAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------ETS 245
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDE 242
C+ Y K + P H + P A L+ R+L P LR + E L FF
Sbjct: 246 CLKETYIRIKKNEYSV-PRH------INPVASALIRRMLHADPTLRPSVAELLTDEFFTS 298
Query: 243 LRDPNTRLPNGRF-LPPLFN 261
P RLP +PP F+
Sbjct: 299 GYAP-MRLPTSCLTVPPRFS 317
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 39/245 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
M LDH N++ L F S + + LV+EYV E R+I Y +++ ++++K
Sbjct: 140 MNQLDHANLIQLYDAFESKND-----IVLVMEYVDGGELFDRIIDESYNLTELDTILFMK 194
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLL-VNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
QIC + ++H + H D+KP+N+L VN Q+K+ DFG A+ E
Sbjct: 195 ----QICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF 249
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ + APE++ + D+WS G + LL G F G++ + L I+
Sbjct: 250 GTPEFLAPEVV-NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLE 308
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
EE FQ + EA + +S+LL + R +A EAL H
Sbjct: 309 DEE------------------------FQD-ISEEAKEFISKLLIKEKSWRISASEALKH 343
Query: 238 PFFDE 242
P+ +
Sbjct: 344 PWLSD 348
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 37/241 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+R + H N+V+L+ + S + LYL + L E R+++ + + +
Sbjct: 74 LRKIKHENIVALEDIYESP---NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTL----- 125
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKL--CDFGSAKVLVKGEPNISYIC 118
Q+ A+ Y+H +G+ HRD+KP+NLL + K+ DFG +K+ KG+ +
Sbjct: 126 IRQVLDAVYYLHR-MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACG 184
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+ Y APE + Y+ A+D WS G + LL G P F E+ +I+K
Sbjct: 185 TPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKA------ 237
Query: 179 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHP 238
EF P W I A D + L++ PN R T +A HP
Sbjct: 238 ---------EYEFDSPY-----WDDI-----SDSAKDFIRNLMEKDPNKRYTCEQAARHP 278
Query: 239 F 239
+
Sbjct: 279 W 279
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 108/243 (44%), Gaps = 40/243 (16%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 61
RLL HPN+V L S +E+ YL L E ++ Y
Sbjct: 76 RLLKHPNIVRLHD---SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHC-----I 127
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNP--HTHQLKLCDFGSAKVLVKGEPN--ISYI 117
QI A+ + H +GV HRD+KP+NLL+ +KL DFG A + V+GE +
Sbjct: 128 QQILEAVLHCHQ-MGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFA 185
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ Y +PE + Y +D+W+ G +L LL+G P F E +L + IK
Sbjct: 186 GTPGYLSPE-VLRKDPYGKPVDLWACGVILYILLVGYPPFWDED-QHRLYQQIKA----- 238
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
+ FP + W + PEA DL++++L +P+ R TA EAL H
Sbjct: 239 -----------GAYDFP---SPEWDTV-----TPEAKDLINKMLTINPSKRITAAEALKH 279
Query: 238 PFF 240
P+
Sbjct: 280 PWI 282
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 13/167 (7%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
+ P +V F+S E +++ +E++ ++ +V+K + R+P +
Sbjct: 81 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIA 131
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR 123
+ + L Y+ + HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYM 189
Query: 124 APELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+PE + G T Y+ DIWS G L E+ +G+ SG + E++
Sbjct: 190 SPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELL 235
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 114/268 (42%), Gaps = 43/268 (16%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 61
R L H +VV H FF +D ++ +VLE R + +K + + + Y
Sbjct: 72 RSLAHQHVVGF-HGFF----EDNDFVFVVLELC---RRRSLLELHKRRKALTEPEARYYL 123
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNISYICSR 120
QI Y+H V HRD+K NL +N ++K+ DFG A KV GE + +
Sbjct: 124 RQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTP 181
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 180
Y APE + ++ +D+WS GC++ LL+G+P F E
Sbjct: 182 NYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------E 218
Query: 181 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
C+ Y +IK + + K + P A L+ ++LQ P R T E L FF
Sbjct: 219 TSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
Query: 241 DELRDPNTRLP-NGRFLPPLFNFKPHEL 267
P RLP +PP F+ P L
Sbjct: 272 TSGYIP-ARLPITCLTIPPXFSIAPSSL 298
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 13/151 (8%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
+ P +V F+S E +++ +E++ ++ +V+K + R+P +
Sbjct: 89 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIA 139
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR 123
+ + L Y+ + HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYM 197
Query: 124 APELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
+PE + G T Y+ DIWS G L E+ +G+
Sbjct: 198 SPERLQG-THYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 13/151 (8%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
+ P +V F+S E +++ +E++ ++ +V+K + R+P +
Sbjct: 124 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIA 174
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR 123
+ + L Y+ + HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y
Sbjct: 175 VIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYM 232
Query: 124 APELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
+PE + G T Y+ DIWS G L E+ +G+
Sbjct: 233 SPERLQG-THYSVQSDIWSMGLSLVEMAVGR 262
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 113/252 (44%), Gaps = 39/252 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR H NVV + + + DEL++ V+E++ I H +M++ +
Sbjct: 71 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 121
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
+ +AL+ +H GV HRDIK ++L+ H ++KL DFG + K P +
Sbjct: 122 CLAVLQALSVLHAQ-GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGT 179
Query: 121 -YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
Y+ APELI Y +DIWS G ++ E++ G+P + E P +
Sbjct: 180 PYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLK 223
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+K + N P++K HK+ P + RLL P R+TA E L HPF
Sbjct: 224 AMKMIRDNLP----PRLKN--LHKV-----SPSLKGFLDRLLVRDPAQRATAAELLKHPF 272
Query: 240 FDELRDPNTRLP 251
+ P + +P
Sbjct: 273 LAKAGPPASIVP 284
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 113/252 (44%), Gaps = 39/252 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR H NVV + + + DEL++ V+E++ I H +M++ +
Sbjct: 125 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 175
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
+ +AL+ +H GV HRDIK ++L+ H ++KL DFG + K P +
Sbjct: 176 CLAVLQALSVLHAQ-GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGT 233
Query: 121 -YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
Y+ APELI Y +DIWS G ++ E++ G+P + E P +
Sbjct: 234 PYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLK 277
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+K + N P++K HK+ P + RLL P R+TA E L HPF
Sbjct: 278 AMKMIRDNLP----PRLKN--LHKV-----SPSLKGFLDRLLVRDPAQRATAAELLKHPF 326
Query: 240 FDELRDPNTRLP 251
+ P + +P
Sbjct: 327 LAKAGPPASIVP 338
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 113/252 (44%), Gaps = 39/252 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR H NVV + + + DEL++ V+E++ I H +M++ +
Sbjct: 82 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 132
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
+ +AL+ +H GV HRDIK ++L+ H ++KL DFG + K P +
Sbjct: 133 CLAVLQALSVLHAQ-GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGT 190
Query: 121 -YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
Y+ APELI Y +DIWS G ++ E++ G+P + E P +
Sbjct: 191 PYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLK 234
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+K + N P++K HK+ P + RLL P R+TA E L HPF
Sbjct: 235 AMKMIRDNLP----PRLKN--LHKV-----SPSLKGFLDRLLVRDPAQRATAAELLKHPF 283
Query: 240 FDELRDPNTRLP 251
+ P + +P
Sbjct: 284 LAKAGPPASIVP 295
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 114/268 (42%), Gaps = 43/268 (16%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 61
R L H +VV H FF +D ++ +VLE R + +K + + + Y
Sbjct: 72 RSLAHQHVVGF-HGFF----EDNDFVFVVLELC---RRRSLLELHKRRKALTEPEARYYL 123
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSR 120
QI Y+H V HRD+K NL +N ++K+ DFG + KV GE + +
Sbjct: 124 RQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTP 181
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 180
Y APE + ++ +D+WS GC++ LL+G+P F E
Sbjct: 182 NYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------E 218
Query: 181 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
C+ Y +IK + + K + P A L+ ++LQ P R T E L FF
Sbjct: 219 TSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
Query: 241 DELRDPNTRLP-NGRFLPPLFNFKPHEL 267
P RLP +PP F+ P L
Sbjct: 272 TSGYIP-ARLPITCLTIPPRFSIAPSSL 298
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 113/252 (44%), Gaps = 39/252 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR H NVV + + + DEL++ V+E++ I H +M++ +
Sbjct: 75 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 125
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
+ +AL+ +H GV HRDIK ++L+ H ++KL DFG + K P +
Sbjct: 126 CLAVLQALSVLHAQ-GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGT 183
Query: 121 -YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
Y+ APELI Y +DIWS G ++ E++ G+P + E P +
Sbjct: 184 PYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLK 227
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+K + N P++K HK+ P + RLL P R+TA E L HPF
Sbjct: 228 AMKMIRDNLP----PRLKN--LHKV-----SPSLKGFLDRLLVRDPAQRATAAELLKHPF 276
Query: 240 FDELRDPNTRLP 251
+ P + +P
Sbjct: 277 LAKAGPPASIVP 288
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 113/252 (44%), Gaps = 39/252 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR H NVV + + + DEL++ V+E++ I H +M++ +
Sbjct: 80 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 130
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
+ +AL+ +H GV HRDIK ++L+ H ++KL DFG + K P +
Sbjct: 131 CLAVLQALSVLHAQ-GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGT 188
Query: 121 -YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
Y+ APELI Y +DIWS G ++ E++ G+P + E P +
Sbjct: 189 PYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLK 232
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+K + N P++K HK+ P + RLL P R+TA E L HPF
Sbjct: 233 AMKMIRDNLP----PRLKN--LHKV-----SPSLKGFLDRLLVRDPAQRATAAELLKHPF 281
Query: 240 FDELRDPNTRLP 251
+ P + +P
Sbjct: 282 LAKAGPPASIVP 293
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 114/268 (42%), Gaps = 43/268 (16%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 61
R L H +VV H FF +D ++ +VLE R + +K + + + Y
Sbjct: 76 RSLAHQHVVGF-HGFF----EDNDFVFVVLELC---RRRSLLELHKRRKALTEPEARYYL 127
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSR 120
QI Y+H V HRD+K NL +N ++K+ DFG + KV GE + +
Sbjct: 128 RQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTP 185
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 180
Y APE + ++ +D+WS GC++ LL+G+P F E
Sbjct: 186 NYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------E 222
Query: 181 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
C+ Y +IK + + K + P A L+ ++LQ P R T E L FF
Sbjct: 223 TSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 275
Query: 241 DELRDPNTRLP-NGRFLPPLFNFKPHEL 267
P RLP +PP F+ P L
Sbjct: 276 TSGYIP-ARLPITCLTIPPRFSIAPSSL 302
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 13/151 (8%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
+ P +V F+S E +++ +E++ ++ +V+K + R+P +
Sbjct: 62 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIA 112
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR 123
+ + L Y+ + HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYM 170
Query: 124 APELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
+PE + G T Y+ DIWS G L E+ +G+
Sbjct: 171 SPERLQG-THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 13/151 (8%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
+ P +V F+S E +++ +E++ ++ +V+K + R+P +
Sbjct: 62 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIA 112
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR 123
+ + L Y+ + HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYM 170
Query: 124 APELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
+PE + G T Y+ DIWS G L E+ +G+
Sbjct: 171 SPERLQG-THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 13/151 (8%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
+ P +V F+S E +++ +E++ ++ +V+K + R+P +
Sbjct: 62 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIA 112
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR 123
+ + L Y+ + HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYM 170
Query: 124 APELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
+PE + G T Y+ DIWS G L E+ +G+
Sbjct: 171 SPERLQG-THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 13/151 (8%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
+ P +V F+S E +++ +E++ ++ +V+K + R+P +
Sbjct: 62 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIA 112
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR 123
+ + L Y+ + HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYM 170
Query: 124 APELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
+PE + G T Y+ DIWS G L E+ +G+
Sbjct: 171 SPERLQG-THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 13/151 (8%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
+ P +V F+S E +++ +E++ ++ +V+K + R+P +
Sbjct: 62 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIA 112
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR 123
+ + L Y+ + HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYM 170
Query: 124 APELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
+PE + G T Y+ DIWS G L E+ +G+
Sbjct: 171 SPERLQG-THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 45/262 (17%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
M +L HP +V+L F +D+ + ++ E++ E +V H KMS+ + Y++
Sbjct: 208 MSVLRHPTLVNLHDAF-----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR 262
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLL-VNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
Q+C+ L ++H H D+KP+N++ +++LKL DFG L +
Sbjct: 263 ----QVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT 317
Query: 118 CSRYYRAPELIFG--ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + APE+ G YT D+WS G + LL G F GE+ + L
Sbjct: 318 GTAEFAAPEVAEGKPVGYYT---DMWSVGVLSYILLSGLSPFGGENDDETL--------- 365
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
+K + N + F I + D + +LL PN R T +AL
Sbjct: 366 ---RNVKSCDWNMDDSAFSGISE-------------DGKDFIRKLLLADPNTRMTIHQAL 409
Query: 236 IHPFFDELRDP--NTRLPNGRF 255
HP+ P ++++P+ R+
Sbjct: 410 EHPWLTPGNAPGRDSQIPSSRY 431
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 113/252 (44%), Gaps = 39/252 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR H NVV + + + DEL++ V+E++ I H +M++ +
Sbjct: 202 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 252
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
+ +AL+ +H GV HRDIK ++L+ H ++KL DFG + K P +
Sbjct: 253 CLAVLQALSVLHAQ-GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGT 310
Query: 121 -YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
Y+ APELI Y +DIWS G ++ E++ G+P + E P +
Sbjct: 311 PYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLK 354
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+K + N P++K HK+ P + RLL P R+TA E L HPF
Sbjct: 355 AMKMIRDNLP----PRLKN--LHKVS-----PSLKGFLDRLLVRDPAQRATAAELLKHPF 403
Query: 240 FDELRDPNTRLP 251
+ P + +P
Sbjct: 404 LAKAGPPASIVP 415
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 14/163 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
M++L+HPN+V L F E E L LV+EY E ++ H RM +
Sbjct: 68 MKILNHPNIVKL----FEVIET-EKTLYLVMEYASGGEVFDYLVAHG-----RMKEKEAR 117
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
F QI A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++
Sbjct: 118 AKFRQIVSAVQYCHQKY-IVHRDLKAENLLLDGDMN-IKIADFGFSNEFTVGNKLDTFCG 175
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
S Y APEL G +D+WS G +L L+ G F G++
Sbjct: 176 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
M++L+HPN+V L F E ++ L LV+EY E ++ H RM +
Sbjct: 67 MKVLNHPNIVKL----FEVIETEKT-LYLVMEYASGGEVFDYLVAHG-----RMKEKEAR 116
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
F QI A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++
Sbjct: 117 AKFRQIVSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCG 174
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
S Y APEL G +D+WS G +L L+ G F G++
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
M++L+HPN+V L F E ++ L LV+EY E ++ H RM +
Sbjct: 67 MKVLNHPNIVKL----FEVIETEKT-LYLVMEYASGGEVFDYLVAHG-----RMKEKEAR 116
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
F QI A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++
Sbjct: 117 AKFRQIVSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCG 174
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
S Y APEL G +D+WS G +L L+ G F G++
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
M++L+HPN+V L F E ++ L LV+EY E ++ H RM +
Sbjct: 67 MKVLNHPNIVKL----FEVIETEKT-LYLVMEYASGGEVFDYLVAHG-----RMKEKEAR 116
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
F QI A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++
Sbjct: 117 AKFRQIVSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCG 174
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
S Y APEL G +D+WS G +L L+ G F G++
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 45/262 (17%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
M +L HP +V+L F +D+ + ++ E++ E +V H KMS+ + Y++
Sbjct: 102 MSVLRHPTLVNLHDAF-----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR 156
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLL-VNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
Q+C+ L ++H H D+KP+N++ +++LKL DFG L +
Sbjct: 157 ----QVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT 211
Query: 118 CSRYYRAPELIFG--ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + APE+ G YT D+WS G + LL G F GE+ + L
Sbjct: 212 GTAEFAAPEVAEGKPVGYYT---DMWSVGVLSYILLSGLSPFGGENDDETL--------- 259
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
+K + N + F I + D + +LL PN R T +AL
Sbjct: 260 ---RNVKSCDWNMDDSAFSGISE-------------DGKDFIRKLLLADPNTRMTIHQAL 303
Query: 236 IHPFFDELRDP--NTRLPNGRF 255
HP+ P ++++P+ R+
Sbjct: 304 EHPWLTPGNAPGRDSQIPSSRY 325
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
++L HP+++ L + T+ +V+EYV E + KH R+ + +
Sbjct: 65 LKLFRHPHIIKLYQVISTPTD-----FFMVMEYVSGGELFDYICKH-----GRVEEMEAR 114
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
F QI A+ Y H + V HRD+KP+N+L++ H + K+ DFG + ++ GE +
Sbjct: 115 RLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRTSCG 172
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGE 160
S Y APE+I G +DIWS G +L LL G F E
Sbjct: 173 SPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 42/249 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+R HPN+++LK + + +YL L E + ++++ + S+R
Sbjct: 75 LRYGQHPNIITLKDVY---DDGKHVYLVTELMRGGELLDKILRQKF-FSER----EASFV 126
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLV-----NPHTHQLKLCDFGSAKVLVKGEPNIS 115
+ I + + Y+H+ GV HRD+KP N+L NP L++CDFG AK L +
Sbjct: 127 LHTIGKTVEYLHSQ-GVVHRDLKPSNILYVDESGNPEC--LRICDFGFAKQLRAENGLLM 183
Query: 116 YIC-SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLG-QPLFPGESGVDQLVEIIKVL 173
C + + APE + Y DIWS G +L +L G P G S D EI+ +
Sbjct: 184 TPCYTANFVAPE-VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS--DTPEEILTRI 240
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
G+ KF + W+ + + A DLVS++L P+ R TA +
Sbjct: 241 GSG---------------KFT-LSGGNWNTVSET-----AKDLVSKMLHVDPHQRLTAKQ 279
Query: 234 ALIHPFFDE 242
L HP+ +
Sbjct: 280 VLQHPWVTQ 288
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 42/249 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+R HPN+++LK + + +YL L E + ++++ + + +
Sbjct: 75 LRYGQHPNIITLKDVY---DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFV----- 126
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLV-----NPHTHQLKLCDFGSAKVLVKGEPNIS 115
+ I + + Y+H+ GV HRD+KP N+L NP L++CDFG AK L +
Sbjct: 127 LHTIGKTVEYLHSQ-GVVHRDLKPSNILYVDESGNPEC--LRICDFGFAKQLRAENGLLM 183
Query: 116 YIC-SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLG-QPLFPGESGVDQLVEIIKVL 173
C + + APE + Y DIWS G +L +L G P G S D EI+ +
Sbjct: 184 TPCYTANFVAPE-VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS--DTPEEILTRI 240
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
G+ KF + W+ + + A DLVS++L P+ R TA +
Sbjct: 241 GSG---------------KFT-LSGGNWNTVSET-----AKDLVSKMLHVDPHQRLTAKQ 279
Query: 234 ALIHPFFDE 242
L HP+ +
Sbjct: 280 VLQHPWVTQ 288
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
++L HP+++ L + T+ +V+EYV E + KH R+ + +
Sbjct: 65 LKLFRHPHIIKLYQVISTPTD-----FFMVMEYVSGGELFDYICKH-----GRVEEMEAR 114
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
F QI A+ Y H + V HRD+KP+N+L++ H + K+ DFG + ++ GE
Sbjct: 115 RLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRDSCG 172
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGE 160
S Y APE+I G +DIWS G +L LL G F E
Sbjct: 173 SPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 14/163 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
M++L+HPN+V L F E ++ L LV+EY E ++ H RM +
Sbjct: 67 MKVLNHPNIVKL----FEVIETEKT-LYLVMEYASGGEVFDYLVAHG-----RMKEKEAR 116
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
F QI A+ Y H + HRD+K +NLL++ + +K+ DFG + G +
Sbjct: 117 AKFRQIVSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDEFCG 174
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
S Y APEL G +D+WS G +L L+ G F G++
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 113/268 (42%), Gaps = 43/268 (16%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 61
R L H +VV H FF +D ++ +VLE R + +K + + + Y
Sbjct: 96 RSLAHQHVVGF-HGFF----EDNDFVFVVLELC---RRRSLLELHKRRKALTEPEARYYL 147
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSR 120
QI Y+H V HRD+K NL +N ++K+ DFG + KV GE +
Sbjct: 148 RQIVLGCQYLHRN-RVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKVLCGTP 205
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 180
Y APE + ++ +D+WS GC++ LL+G+P F E
Sbjct: 206 NYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------E 242
Query: 181 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
C+ Y +IK + + K + P A L+ ++LQ P R T E L FF
Sbjct: 243 TSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 295
Query: 241 DELRDPNTRLP-NGRFLPPLFNFKPHEL 267
P RLP +PP F+ P L
Sbjct: 296 TSGYIP-ARLPITCLTIPPRFSIAPSSL 322
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 113/268 (42%), Gaps = 43/268 (16%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 61
R L H +VV H FF +D ++ +VLE R + +K + + + Y
Sbjct: 94 RSLAHQHVVGF-HGFF----EDNDFVFVVLELC---RRRSLLELHKRRKALTEPEARYYL 145
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSR 120
QI Y+H V HRD+K NL +N ++K+ DFG + KV GE +
Sbjct: 146 RQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTP 203
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 180
Y APE + ++ +D+WS GC++ LL+G+P F E
Sbjct: 204 NYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------E 240
Query: 181 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
C+ Y +IK + + K + P A L+ ++LQ P R T E L FF
Sbjct: 241 TSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 293
Query: 241 DELRDPNTRLP-NGRFLPPLFNFKPHEL 267
P RLP +PP F+ P L
Sbjct: 294 TSGYIP-ARLPITCLTIPPRFSIAPSSL 320
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 103/244 (42%), Gaps = 60/244 (24%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK----------V 106
V+ Y + +AL IH G+ HRD+KP N L N + L DFG A+
Sbjct: 119 VREYMLNLFKALKRIHQ-FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLK 177
Query: 107 LVKGEP-------NISYIC-SRY-----------YRAPELIFGATEYTAAIDIWSAGCVL 147
V+ E N IC SR +RAPE++ T AID+WSAG +
Sbjct: 178 FVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIF 237
Query: 148 AELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIK-----------------------C 183
LL G+ P + + L +I+ + G +RE I+ C
Sbjct: 238 LSLLSGRYPFYKASDDLTALAQIMTIRG--SRETIQAAKTFGKSILCSKEVPAQDLRKLC 295
Query: 184 MNPNYTEFKFPQ----IKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+ P+ I+ H + +P EA DL+ +LL +P R TA EAL+HPF
Sbjct: 296 ERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPF 355
Query: 240 FDEL 243
F ++
Sbjct: 356 FKDM 359
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 108/243 (44%), Gaps = 40/243 (16%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 61
RLL HPN+V L S +E+ YL L E ++ Y
Sbjct: 65 RLLKHPNIVRLHD---SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHC-----I 116
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPH--THQLKLCDFGSAKVLVKGEPN--ISYI 117
QI A+ + H +GV HR++KP+NLL+ +KL DFG A + V+GE +
Sbjct: 117 QQILEAVLHCHQ-MGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFA 174
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ Y +PE + Y +D+W+ G +L LL+G P F E +L + IK
Sbjct: 175 GTPGYLSPE-VLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA----- 227
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
+ FP + W + PEA DL++++L +P+ R TA EAL H
Sbjct: 228 -----------GAYDFPSPE---WDTV-----TPEAKDLINKMLTINPSKRITAAEALKH 268
Query: 238 PFF 240
P+
Sbjct: 269 PWI 271
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 107/255 (41%), Gaps = 58/255 (22%)
Query: 2 RLLDHPNVVSLKHCF---------FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRM 52
++ HPN++ LK + F +K EL+ +Y+ E V K K+ + +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELF-----DYLTEKVTLSEKETRKIMRAL 133
Query: 53 PLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEP 112
+ L+ + + HRD+KP+N+L++ + +KL DFG + L GE
Sbjct: 134 LEVICALH-------------KLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEK 179
Query: 113 NISYICSRYYRAPELIFGATE-----YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLV 167
S + Y APE+I + Y +D+WS G ++ LL G P F + L
Sbjct: 180 LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239
Query: 168 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNL 227
I M+ NY +F P+ W DLVSR L P
Sbjct: 240 MI--------------MSGNY-QFGSPE-----WDD-----YSDTVKDLVSRFLVVQPQK 274
Query: 228 RSTALEALIHPFFDE 242
R TA EAL HPFF +
Sbjct: 275 RYTAEEALAHPFFQQ 289
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 115/255 (45%), Gaps = 49/255 (19%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
+R HPN+++LK + D Y+ +V E + E + ++++ + + +
Sbjct: 70 LRYGQHPNIITLKDVY-----DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAV--- 121
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLV-----NPHTHQLKLCDFGSAKVLVKGEPN 113
+ I + + Y+H GV HRD+KP N+L NP + +++CDFG AK L
Sbjct: 122 --LFTITKTVEYLHAQ-GVVHRDLKPSNILYVDESGNPES--IRICDFGFAKQLRAENGL 176
Query: 114 ISYIC-SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLG-QPLFPGESGVDQLVEIIK 171
+ C + + APE + Y AA DIWS G +L +L G P G D EI+
Sbjct: 177 LMTPCYTANFVAPE-VLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEILA 233
Query: 172 VLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTA 231
+G+ KF + W+ + A DLVS++L P+ R TA
Sbjct: 234 RIGSG---------------KF-SLSGGYWNSV-----SDTAKDLVSKMLHVDPHQRLTA 272
Query: 232 LEALIHPF---FDEL 243
L HP+ +D+L
Sbjct: 273 ALVLRHPWIVHWDQL 287
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
M++L+HPN+V L F E ++ L LV+EY E ++ H + + +
Sbjct: 60 MKVLNHPNIVKL----FEVIETEKT-LYLVMEYASGGEVFDYLVAHGWMKEKE-----AR 109
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
F QI A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++
Sbjct: 110 AKFRQIVSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCG 167
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
S Y APEL G +D+WS G +L L+ G F G++
Sbjct: 168 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
M++L+HPN+V L F E ++ L LV+EY E ++ H RM +
Sbjct: 67 MKVLNHPNIVKL----FEVIETEKT-LYLVMEYASGGEVFDYLVAHG-----RMKEKEAR 116
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
F QI A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++
Sbjct: 117 AKFRQIVSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDAFCG 174
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
+ Y APEL G +D+WS G +L L+ G F G++
Sbjct: 175 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 37/238 (15%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
+ HPN+V+L + S LYL + L E R+++ + + + +Q
Sbjct: 73 IKHPNIVALDDIYESGGH---LYLIMQLVSGGELFDRIVEKGFYTERDASRL-----IFQ 124
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNP--HTHQLKLCDFGSAKVLVKGEPNISYICSRY 121
+ A+ Y+H+ +G+ HRD+KP+NLL ++ + DFG +K+ G + +
Sbjct: 125 VLDAVKYLHD-LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
Y APE + Y+ A+D WS G + LL G P F E+ +I+K
Sbjct: 184 YVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA--------- 233
Query: 182 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF P W I A D + L++ P R T +AL HP+
Sbjct: 234 ------EYEFDSPY-----WDDI-----SDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
L+HP +V++ + T L +V+EYV R I H I V
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEV---IAD 124
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI----SYICS 119
C+AL + H G+ HRD+KP N+L++ T+ +K+ DFG A+ + ++ + I +
Sbjct: 125 ACQALNFSHQN-GIIHRDVKPANILISA-TNAVKVVDFGIARAIADSGNSVXQTAAVIGT 182
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 163
Y +PE G + A D++S GCVL E+L G+P F G+S V
Sbjct: 183 AQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 37/237 (15%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
HPN+V+L + S LYL + L E R+++ + + + +Q+
Sbjct: 75 HPNIVALDDIYESGGH---LYLIMQLVSGGELFDRIVEKGFYTERDASRL-----IFQVL 126
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNP--HTHQLKLCDFGSAKVLVKGEPNISYICSRYYR 123
A+ Y+H+ +G+ HRD+KP+NLL ++ + DFG +K+ G + + Y
Sbjct: 127 DAVKYLHD-LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYV 185
Query: 124 APELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 183
APE + Y+ A+D WS G + LL G P F E+ +I+K
Sbjct: 186 APE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA----------- 233
Query: 184 MNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
EF P W I A D + L++ P R T +AL HP+
Sbjct: 234 ----EYEFDSPY-----WDDI-----SDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 21/166 (12%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFY 62
L H N+VS+ E+D+ Y LV+EY+ T+ I+ H +S + +
Sbjct: 68 LSHQNIVSM----IDVDEEDDCYY-LVMEYIEGPTLSEYIESHGPLSVDTAINFTN---- 118
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS----YIC 118
QI + + H+ + + HRDIKPQN+L++ + LK+ DFG AK L E +++ +
Sbjct: 119 QILDGIKHAHD-MRIVHRDIKPQNILIDSN-KTLKIFDFGIAKAL--SETSLTQTNHVLG 174
Query: 119 SRYYRAPELIFG-ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 163
+ Y +PE G AT+ DI+S G VL E+L+G+P F GE+ V
Sbjct: 175 TVQYFSPEQAKGEATD--ECTDIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 37/238 (15%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
+ HPN+V+L + S LYL + L E R+++ + + + +Q
Sbjct: 73 IKHPNIVALDDIYESGGH---LYLIMQLVSGGELFDRIVEKGFYTERDASRL-----IFQ 124
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNP--HTHQLKLCDFGSAKVLVKGEPNISYICSRY 121
+ A+ Y+H+ +G+ HRD+KP+NLL ++ + DFG +K+ G + +
Sbjct: 125 VLDAVKYLHD-LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
Y APE + Y+ A+D WS G + LL G P F E+ +I+K
Sbjct: 184 YVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA--------- 233
Query: 182 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF P W I A D + L++ P R T +AL HP+
Sbjct: 234 ------EYEFDSPY-----WDDI-----SDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 37/238 (15%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
+ HPN+V+L + S LYL + L E R+++ + + + +Q
Sbjct: 73 IKHPNIVALDDIYESGGH---LYLIMQLVSGGELFDRIVEKGFYTERDASRL-----IFQ 124
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNP--HTHQLKLCDFGSAKVLVKGEPNISYICSRY 121
+ A+ Y+H+ +G+ HRD+KP+NLL ++ + DFG +K+ G + +
Sbjct: 125 VLDAVKYLHD-LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
Y APE + Y+ A+D WS G + LL G P F E+ +I+K
Sbjct: 184 YVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA--------- 233
Query: 182 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
EF P W I A D + L++ P R T +AL HP+
Sbjct: 234 ------EYEFDSPY-----WDDI-----SDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 45/248 (18%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
+ + H N++ L F S E L ++ E++ + R+ +++++R + YV
Sbjct: 55 LNIARHRNILHLHESFESMEE-----LVMIFEFISGLDIFERINTSAFELNEREIVSYV- 108
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPH-THQLKLCDFGSAKVLVKGEP-NISY 116
+Q+C AL ++H+ + H DI+P+N++ + +K+ +FG A+ L G+ + +
Sbjct: 109 ---HQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF 164
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
YY APE + + A D+WS G ++ LL G F E+ Q++E I
Sbjct: 165 TAPEYY-APE-VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-QQIIENI------ 215
Query: 177 TREEIKCMNPNYT--EFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
MN YT E F +I EA+D V RLL R TA EA
Sbjct: 216 -------MNAEYTFDEEAFKEI-------------SIEAMDFVDRLLVKERKSRMTASEA 255
Query: 235 LIHPFFDE 242
L HP+ +
Sbjct: 256 LQHPWLKQ 263
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 14/163 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
M++L+HPN+V L F E E L L++EY E ++ H RM +
Sbjct: 65 MKILNHPNIVKL----FEVIET-EKTLYLIMEYASGGEVFDYLVAHG-----RMKEKEAR 114
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
F QI A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++
Sbjct: 115 SKFRQIVSAVQYCHQK-RIVHRDLKAENLLLDADMN-IKIADFGFSNEFTVGGKLDTFCG 172
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
S Y APEL G +D+WS G +L L+ G F G++
Sbjct: 173 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 112/265 (42%), Gaps = 43/265 (16%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 61
R L H +VV H FF +D ++ +VLE R + +K + + + Y
Sbjct: 70 RSLAHQHVVGF-HGFF----EDNDFVFVVLELCR---RRSLLELHKRRKALTEPEARYYL 121
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNISYICSR 120
QI Y+H V HRD+K NL +N ++K+ DFG A KV GE +
Sbjct: 122 RQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTP 179
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 180
Y APE + ++ +D+WS GC++ LL+G+P F E
Sbjct: 180 NYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------E 216
Query: 181 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
C+ Y +IK + + K + P A L+ ++LQ P R T E L FF
Sbjct: 217 TSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 269
Query: 241 DELRDPNTRLP-NGRFLPPLFNFKP 264
P RLP +PP F+ P
Sbjct: 270 TSGYIP-ARLPITCLTIPPRFSIAP 293
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 16/175 (9%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M + P VV L C F +D+ YL +V+EY+P + +Y + ++ + K Y
Sbjct: 129 MAFANSPWVVQL-FCAF----QDDKYLYMVMEYMPGGDLVNLMSNYDVPEK----WAKFY 179
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNI-SYIC 118
++ AL IH ++G+ HRD+KP N+L++ H H LKL DFG+ K+ G + + +
Sbjct: 180 TAEVVLALDAIH-SMGLIHRDVKPDNMLLDKHGH-LKLADFGTCMKMDETGMVHCDTAVG 237
Query: 119 SRYYRAPELI---FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ Y +PE++ G Y D WS G L E+L+G F +S V +I+
Sbjct: 238 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 292
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 11/160 (6%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++LL HP+++ L + T+ + +V+EY + I +M++ + +
Sbjct: 63 LKLLRHPHIIKLYDVITTPTD-----IVMVIEYAGGELFDYIVEKKRMTEDEG----RRF 113
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
F QI A+ Y H + HRD+KP+NLL++ + + +K+ DFG + ++ G + S
Sbjct: 114 FQQIICAIEYCHRH-KIVHRDLKPENLLLDDNLN-VKIADFGLSNIMTDGNFLKTSCGSP 171
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGE 160
Y APE+I G +D+WS G VL +L+G+ F E
Sbjct: 172 NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 42/238 (17%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI 64
+HP +V L CF + E L V+EYV + H + +++P + + Y +I
Sbjct: 79 NHPFLVGLHSCF-----QTESRLFFVIEYVNGGD---LMFHMQRQRKLPEEHARFYSAEI 130
Query: 65 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYR 123
AL Y+H G+ +RD+K N+L++ H +KL D+G K ++ S C Y
Sbjct: 131 SLALNYLHER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYI 188
Query: 124 APELIFGATEYTAAIDIWSAGCVLAELLLGQPLF--------PGESGVDQLVEII--KVL 173
APE++ G +Y ++D W+ G ++ E++ G+ F P ++ D L ++I K +
Sbjct: 189 APEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 247
Query: 174 GTPTREEIKC-------MNPNYTE-------FKFPQIKAHP------WHKIFQKRMPP 211
P +K +N + E F I+ HP W + QK++ P
Sbjct: 248 RIPRSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMMEQKQVVP 305
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
L+HP +V++ + T L +V+EYV R I H I V
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEV---IAD 124
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS----YICS 119
C+AL + H G+ HRD+KP N++++ T+ +K+ DFG A+ + +++ I +
Sbjct: 125 ACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 163
Y +PE G + A D++S GCVL E+L G+P F G+S V
Sbjct: 183 AQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 17/177 (9%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY--VKLYF 61
++HP +V L + F + E L L+L+++ R ++S+ + VK Y
Sbjct: 83 VNHPFIVKLHYAF-----QTEGKLYLILDFL-----RGGDLFTRLSKEVMFTEEDVKFYL 132
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 121
++ AL ++H ++G+ +RD+KP+N+L++ H +KL DFG +K + E C
Sbjct: 133 AELALALDHLH-SLGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 122 -YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV-LGTP 176
Y APE++ +T + D WS G ++ E+L G F G+ + + I+K LG P
Sbjct: 191 EYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 43/245 (17%)
Query: 7 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 66
P +V+L + F + T+ L+L+L+Y+ + H +R V++Y +I
Sbjct: 119 PFLVTLHYAFQTETK-----LHLILDYINGGE---LFTHLSQRERFTEHEVQIYVGEIVL 170
Query: 67 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-ICSRY-YRA 124
AL ++H +G+ +RDIK +N+L++ + H + L DFG +K V E +Y C Y A
Sbjct: 171 ALEHLHK-LGIIYRDIKLENILLDSNGHVV-LTDFGLSKEFVADETERAYDFCGTIEYMA 228
Query: 125 PELIFGA-TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 183
P+++ G + + A+D WS G ++ ELL G F + + EI +R +K
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI-------SRRILKS 281
Query: 184 MNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR-----STALEALIHP 238
P +PQ M A DL+ RLL P R A E H
Sbjct: 282 EPP------YPQ------------EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323
Query: 239 FFDEL 243
FF ++
Sbjct: 324 FFQKI 328
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
+ P +V F+S E +++ +E++ ++ +V+K + R+P +
Sbjct: 65 NSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIA 115
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR 123
+ + L Y+ + HRD+KP N+LVN ++KLCDFG + L+ N ++ +R Y
Sbjct: 116 VIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDEMAN-EFVGTRSYM 173
Query: 124 APELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
+PE + G T Y+ DIWS G L E+ +G+
Sbjct: 174 SPERLQG-THYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 109/282 (38%), Gaps = 59/282 (20%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 61
R +D P V+ F + + + E ++ + K Q +P +
Sbjct: 88 RTVDCPFTVTFYGALFREGD-----VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIA 142
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-EPNISYICSR 120
I +AL ++H+ + V HRD+KP N+L+N Q+K CDFG + LV +I C +
Sbjct: 143 VSIVKALEHLHSKLSVIHRDVKPSNVLINA-LGQVKXCDFGISGYLVDDVAKDIDAGC-K 200
Query: 121 YYRAPELI---FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
Y APE I Y+ DIWS G EL + + FP +S GTP
Sbjct: 201 PYXAPERINPELNQKGYSVKSDIWSLGITXIELAILR--FPYDS-----------WGTPF 247
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
++ Q+ P ++ + E VD S+ L+ + R T E H
Sbjct: 248 QQ-------------LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQH 294
Query: 238 PFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVDMLVKLI 279
PF F HE KG V VKLI
Sbjct: 295 PF----------------------FTLHESKGTDVASFVKLI 314
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 113/238 (47%), Gaps = 42/238 (17%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI 64
+HP +V L CF + E L V+EYV + H + +++P + + Y +I
Sbjct: 111 NHPFLVGLHSCF-----QTESRLFFVIEYVNGGD---LMFHMQRQRKLPEEHARFYSAEI 162
Query: 65 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVK-GEPNISYICSRYYR 123
AL Y+H G+ +RD+K N+L++ H +KL D+G K ++ G+ ++ + Y
Sbjct: 163 SLALNYLHER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSTFCGTPNYI 220
Query: 124 APELIFGATEYTAAIDIWSAGCVLAELLLGQPLF--------PGESGVDQLVEII--KVL 173
APE++ G +Y ++D W+ G ++ E++ G+ F P ++ D L ++I K +
Sbjct: 221 APEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 279
Query: 174 GTPTREEIKC-------MNPN-------YTEFKFPQIKAHP------WHKIFQKRMPP 211
P +K +N + + + F I+ HP W + QK++ P
Sbjct: 280 RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVP 337
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 12 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 71
L H F + K+ L+ V+EY+ + +H + + L Y +I L ++
Sbjct: 80 LTHMFCTFQTKENLFF--VMEYLNGGD---LMYHIQSCHKFDLSRATFYAAEIILGLQFL 134
Query: 72 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFG 130
H+ G+ +RD+K N+L++ H +K+ DFG K + G+ + C Y APE++ G
Sbjct: 135 HSK-GIVYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG 192
Query: 131 ATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
+Y ++D WS G +L E+L+GQ F G+
Sbjct: 193 -QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 222
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 55/260 (21%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYL-----NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
DHPNV+ + S T LY+ NL L+ + E+ + V + K+ + I +
Sbjct: 85 DHPNVI---RYYCSETTDRFLYIALELCNLNLQDLVESKN-VSDENLKLQKEYNPISL-- 138
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTH------------QLKLCDFGSAKVL 107
QI +A++H ++ + HRD+KPQN+LV+ + ++ + DFG K L
Sbjct: 139 -LRQIASGVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 108 VKGEPNISY-----ICSRYYRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLFPGE 160
G+ + +RAPEL+ +T+ T +IDI+S GCV +L + P
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPFG 255
Query: 161 SGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ II+ G + +E+KC++ + + EA DL+S++
Sbjct: 256 DKYSRESNIIR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQM 293
Query: 221 LQYSPNLRSTALEALIHPFF 240
+ + P R TA++ L HP F
Sbjct: 294 IDHDPLKRPTAMKVLRHPLF 313
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
L+HP +V++ + T L +V+EYV R I H I V
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEV---IAD 124
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS----YICS 119
C+AL + H G+ HRD+KP N++++ T+ +K+ DFG A+ + +++ I +
Sbjct: 125 ACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
Y +PE G + A D++S GCVL E+L G+P F G+S
Sbjct: 183 AQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
L+HP +V++ + T L +V+EYV R I H I V
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEV---IAD 124
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS----YICS 119
C+AL + H G+ HRD+KP N++++ T+ +K+ DFG A+ + +++ I +
Sbjct: 125 ACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 163
Y +PE G + A D++S GCVL E+L G+P F G+S V
Sbjct: 183 AQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 42/238 (17%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI 64
+HP +V L CF + E L V+EYV + H + +++P + + Y +I
Sbjct: 64 NHPFLVGLHSCF-----QTESRLFFVIEYVNGGD---LMFHMQRQRKLPEEHARFYSAEI 115
Query: 65 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYR 123
AL Y+H G+ +RD+K N+L++ H +KL D+G K ++ S C Y
Sbjct: 116 SLALNYLHER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYI 173
Query: 124 APELIFGATEYTAAIDIWSAGCVLAELLLGQPLF--------PGESGVDQLVEII--KVL 173
APE++ G +Y ++D W+ G ++ E++ G+ F P ++ D L ++I K +
Sbjct: 174 APEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 232
Query: 174 GTPTREEIKC-------MNPN-------YTEFKFPQIKAHP------WHKIFQKRMPP 211
P +K +N + + + F I+ HP W + QK++ P
Sbjct: 233 RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVP 290
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 55/260 (21%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYL-----NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKL 59
DHPNV+ + S T LY+ NL L+ + E+ + V + K+ + I +
Sbjct: 85 DHPNVI---RYYCSETTDRFLYIALELCNLNLQDLVESKN-VSDENLKLQKEYNPISL-- 138
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTH------------QLKLCDFGSAKVL 107
QI +A++H ++ + HRD+KPQN+LV+ + ++ + DFG K L
Sbjct: 139 -LRQIASGVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 108 VKGEPNISY-----ICSRYYRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLFPGE 160
G+ + +RAPEL+ +T+ T +IDI+S GCV +L + P
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPFG 255
Query: 161 SGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ II+ G + +E+KC++ + + EA DL+S++
Sbjct: 256 DKYSRESNIIR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQM 293
Query: 221 LQYSPNLRSTALEALIHPFF 240
+ + P R TA++ L HP F
Sbjct: 294 IDHDPLKRPTAMKVLRHPLF 313
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 42/238 (17%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI 64
+HP +V L CF + E L V+EYV + H + +++P + + Y +I
Sbjct: 68 NHPFLVGLHSCF-----QTESRLFFVIEYVNGGD---LMFHMQRQRKLPEEHARFYSAEI 119
Query: 65 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYR 123
AL Y+H G+ +RD+K N+L++ H +KL D+G K ++ S C Y
Sbjct: 120 SLALNYLHER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYI 177
Query: 124 APELIFGATEYTAAIDIWSAGCVLAELLLGQPLF--------PGESGVDQLVEII--KVL 173
APE++ G +Y ++D W+ G ++ E++ G+ F P ++ D L ++I K +
Sbjct: 178 APEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 236
Query: 174 GTPTREEIKC-------MNPN-------YTEFKFPQIKAHP------WHKIFQKRMPP 211
P +K +N + + + F I+ HP W + QK++ P
Sbjct: 237 RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVP 294
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 109/244 (44%), Gaps = 45/244 (18%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
++ L H ++ L H + + + +VLEY P E +I R+ +
Sbjct: 62 LKNLRHQHICQLYHVLETANK-----IFMVLEYCPGGELFDYIISQ-----DRLSEEETR 111
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYI 117
+ F QI A+AY+H+ G HRD+KP+NLL + + H+LKL DFG AK + ++
Sbjct: 112 VVFRQIVSAVAYVHSQ-GYAHRDLKPENLLFDEY-HKLKLIDFGLCAKPKGNKDYHLQTC 169
Query: 118 C-SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
C S Y APELI G + + D+WS G +L L+ G P + D ++ + K
Sbjct: 170 CGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG--FLPFDD--DNVMALYK----- 220
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
K M Y K + P ++ L+ ++LQ P R + L
Sbjct: 221 -----KIMRGKYD---------------VPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260
Query: 237 HPFF 240
HP+
Sbjct: 261 HPWI 264
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 106/255 (41%), Gaps = 58/255 (22%)
Query: 2 RLLDHPNVVSLKHCF---------FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRM 52
++ HPN++ LK + F +K EL+ +Y+ E V K K+ + +
Sbjct: 66 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELF-----DYLTEKVTLSEKETRKIMRAL 120
Query: 53 PLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEP 112
+ L+ + + HRD+KP+N+L++ + +KL DFG + L GE
Sbjct: 121 LEVICALH-------------KLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEK 166
Query: 113 NISYICSRYYRAPELIFGATE-----YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLV 167
+ Y APE+I + Y +D+WS G ++ LL G P F + L
Sbjct: 167 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 226
Query: 168 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNL 227
I M+ NY +F P+ W DLVSR L P
Sbjct: 227 MI--------------MSGNY-QFGSPE-----WDD-----YSDTVKDLVSRFLVVQPQK 261
Query: 228 RSTALEALIHPFFDE 242
R TA EAL HPFF +
Sbjct: 262 RYTAEEALAHPFFQQ 276
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 43/204 (21%)
Query: 47 KMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKV 106
+ SQR P K Y ++C AL Y+H+ + +RD+KP+N+L++ + H +K+ DFG AK
Sbjct: 98 RKSQRFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNGH-IKITDFGFAKY 155
Query: 107 LVKGEPNISY-ICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVD 164
+ P+++Y +C Y APE++ Y +ID WS G ++ E+L G F + +
Sbjct: 156 V----PDVTYXLCGTPDYIAPEVV-STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK 210
Query: 165 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL--- 221
+I+ E +FP + DL+SRL+
Sbjct: 211 TYEKILNA-----------------ELRFPPF------------FNEDVKDLLSRLITRD 241
Query: 222 --QYSPNLRSTALEALIHPFFDEL 243
Q NL++ + HP+F E+
Sbjct: 242 LSQRLGNLQNGTEDVKNHPWFKEV 265
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 41/231 (17%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYV--PETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
HPN+V L F D+L+ LV+E + E R+ K + I KL
Sbjct: 65 HPNIVKLHEVFH-----DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKL---- 115
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQL--KLCDFGSAKVLVKGEPNISYIC-SR 120
A++++H+ +GV HRD+KP+NLL L K+ DFG A++ + C +
Sbjct: 116 -VSAVSHMHD-VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTL 173
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES---GVDQLVEIIKVLGTPT 177
+Y APEL+ Y + D+WS G +L +L GQ F VEI+K +
Sbjct: 174 HYAAPELL-NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI---- 228
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
+F F + W + Q EA DL+ LL PN R
Sbjct: 229 ---------KKGDFSF---EGEAWKNVSQ-----EAKDLIQGLLTVDPNKR 262
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
L+HP +V++ + T L +V+EYV R I H I V
Sbjct: 69 LNHPAIVAVYATGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEV---IAD 124
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS----YICS 119
C+AL + H G+ HRD+KP N++++ T+ +K+ DFG A+ + +++ I +
Sbjct: 125 ACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 163
Y +PE G + A D++S GCVL E+L G+P F G+S V
Sbjct: 183 AQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 17/177 (9%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY--VKLYF 61
++HP +V L + F + E L L+L+++ R ++S+ + VK Y
Sbjct: 83 VNHPFIVKLHYAF-----QTEGKLYLILDFL-----RGGDLFTRLSKEVMFTEEDVKFYL 132
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 121
++ AL ++H ++G+ +RD+KP+N+L++ H +KL DFG +K + E C
Sbjct: 133 AELALALDHLH-SLGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 122 -YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV-LGTP 176
Y APE++ +T + D WS G ++ E+L G F G+ + + I+K LG P
Sbjct: 191 EYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKL 59
R L HPN+V K + T +L +++EY E R+ + R +
Sbjct: 71 RSLRHPNIVRFKEVILTPT-----HLAIIMEYASGGELYERICN-----AGRFSEDEARF 120
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPH-THQLKLCDFGSAKVLVKGEPNISYIC 118
+F Q+ ++Y H ++ +CHRD+K +N L++ +LK+CDFG +K V S +
Sbjct: 121 FFQQLLSGVSYCH-SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVG 179
Query: 119 SRYYRAPELIFGATEYTAAI-DIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTP 176
+ Y APE++ EY I D+WS G L +L+G P E D I ++L
Sbjct: 180 TPAYIAPEVLL-RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILS-- 236
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
++ P R+ PE L+SR+ P R + E
Sbjct: 237 ------------VKYSIPD----------DIRISPECCHLISRIFVADPATRISIPEIKT 274
Query: 237 HPFF 240
H +F
Sbjct: 275 HSWF 278
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 109/255 (42%), Gaps = 58/255 (22%)
Query: 2 RLLDHPNVVSLKHCF---------FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRM 52
++ HPN++ LK + F +K EL+ +Y+ E V +S++
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELF-----DYLTEKV--------TLSEKE 125
Query: 53 PLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEP 112
++ IC AL + + + HRD+KP+N+L++ + +KL DFG + L GE
Sbjct: 126 TRKIMRALLEVIC-AL----HKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEK 179
Query: 113 NISYICSRYYRAPELIFGATE-----YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLV 167
+ Y APE+I + Y +D+WS G ++ LL G P F + L
Sbjct: 180 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239
Query: 168 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNL 227
I M+ NY +F P+ W DLVSR L P
Sbjct: 240 MI--------------MSGNY-QFGSPE-----WDD-----YSDTVKDLVSRFLVVQPQK 274
Query: 228 RSTALEALIHPFFDE 242
R TA EAL HPFF +
Sbjct: 275 RYTAEEALAHPFFQQ 289
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 17/177 (9%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY--VKLYF 61
++HP +V L + F + E L L+L+++ R ++S+ + VK Y
Sbjct: 84 VNHPFIVKLHYAF-----QTEGKLYLILDFL-----RGGDLFTRLSKEVMFTEEDVKFYL 133
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 121
++ AL ++H ++G+ +RD+KP+N+L++ H +KL DFG +K + E C
Sbjct: 134 AELALALDHLH-SLGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTV 191
Query: 122 -YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV-LGTP 176
Y APE++ +T + D WS G ++ E+L G F G+ + + I+K LG P
Sbjct: 192 EYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 12 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 71
L H F + K+ L+ V+EY+ + +H + + L Y +I L ++
Sbjct: 81 LTHMFCTFQTKENLFF--VMEYLNGGD---LMYHIQSCHKFDLSRATFYAAEIILGLQFL 135
Query: 72 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFG 130
H+ G+ +RD+K N+L++ H +K+ DFG K + G+ + C Y APE++ G
Sbjct: 136 HSK-GIVYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG 193
Query: 131 ATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
+Y ++D WS G +L E+L+GQ F G+
Sbjct: 194 -QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 223
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 13/163 (7%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYK-MSQRMPLIYVKLYFY 62
L+HP +V++ + T L +V+EYV R I H M+ + + +
Sbjct: 86 LNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA---- 140
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS----YIC 118
C+AL + H G+ HRD+KP N++++ T+ +K+ DFG A+ + +++ I
Sbjct: 141 DACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIG 198
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
+ Y +PE G + A D++S GCVL E+L G+P F G+S
Sbjct: 199 TAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDS 240
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 14/163 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
M++L+HPN+V L F E E L L++EY E ++ H RM +
Sbjct: 68 MKILNHPNIVKL----FEVIET-EKTLYLIMEYASGGEVFDYLVAHG-----RMKEKEAR 117
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
F QI A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++
Sbjct: 118 SKFRQIVSAVQYCHQK-RIVHRDLKAENLLLDADMN-IKIADFGFSNEFTVGGKLDAFCG 175
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
+ Y APEL G +D+WS G +L L+ G F G++
Sbjct: 176 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 44 HHYKMSQR-MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG 102
H Y M Q P Y +IC L +H + +RD+KP+N+L++ H H +++ D G
Sbjct: 274 HIYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGH-IRISDLG 331
Query: 103 SAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESG 162
A + +G+ + + Y APE++ YT + D W+ GC+L E++ GQ F
Sbjct: 332 LAVHVPEGQTIKGRVGTVGYMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPF----- 385
Query: 163 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQ 222
Q + IK REE++ + +K P + + +R P+A L S+LL
Sbjct: 386 -QQRKKKIK------REEVERL-----------VKEVP--EEYSERFSPQARSLCSQLLC 425
Query: 223 YSPNLR-----STALEALIHPFFDELRDPNTRLPNGRFLPPLFNFKP 264
P R +A E HP F +L RL G PP FKP
Sbjct: 426 KDPAERLGCRGGSAREVKEHPLFKKLN--FKRLGAGMLEPP---FKP 467
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 51/259 (19%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ + + F D + L+LE+ P +++ ++ H + ++ +++
Sbjct: 71 LRHPNILRMYNYFH-----DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---- 121
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL Y H V HRDIKP+NLL+ + +LK+ DFG + V + Y
Sbjct: 122 ELADALHYCHER-KVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDY 178
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G T + +D+W AG + E L+G P F S + I+ V
Sbjct: 179 LPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV---------- 227
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDE 242
+ KFP + + DL+S+LL+Y P R + HP+
Sbjct: 228 -------DLKFPPF------------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV-- 266
Query: 243 LRDPNTRLPNGRFLPPLFN 261
N+R R LPP++
Sbjct: 267 --KANSR----RVLPPVYQ 279
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 18/176 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M + P VV L + F +D+ YL +V+EY+P + +Y + P + + Y
Sbjct: 128 MAFANSPWVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYDV----PEKWARFY 178
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI---SYI 117
++ AL IH ++G HRD+KP N+L++ H LKL DFG+ + K E + + +
Sbjct: 179 TAEVVLALDAIH-SMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNK-EGMVRCDTAV 235
Query: 118 CSRYYRAPELI---FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ Y +PE++ G Y D WS G L E+L+G F +S V +I+
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 18/176 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M + P VV L + F +D+ YL +V+EY+P + +Y + P + + Y
Sbjct: 128 MAFANSPWVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYDV----PEKWARFY 178
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI---SYI 117
++ AL IH ++G HRD+KP N+L++ H LKL DFG+ + K E + + +
Sbjct: 179 TAEVVLALDAIH-SMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNK-EGMVRCDTAV 235
Query: 118 CSRYYRAPELI---FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ Y +PE++ G Y D WS G L E+L+G F +S V +I+
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 51/259 (19%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ + + F D + L+LE+ P +++ ++ H + ++ +++
Sbjct: 71 LRHPNILRMYNYFH-----DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---- 121
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL Y H V HRDIKP+NLL+ + +LK+ DFG + V + Y
Sbjct: 122 ELADALHYCHER-KVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDY 178
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G T + +D+W AG + E L+G P F S + I+ V
Sbjct: 179 LPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV---------- 227
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDE 242
+ KFP + + DL+S+LL+Y P R + HP+
Sbjct: 228 -------DLKFPPF------------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV-- 266
Query: 243 LRDPNTRLPNGRFLPPLFN 261
N+R R LPP++
Sbjct: 267 --KANSR----RVLPPVYQ 279
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 18/176 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M + P VV L + F +D+ YL +V+EY+P + +Y + P + + Y
Sbjct: 123 MAFANSPWVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYDV----PEKWARFY 173
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI---SYI 117
++ AL IH ++G HRD+KP N+L++ H LKL DFG+ + K E + + +
Sbjct: 174 TAEVVLALDAIH-SMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNK-EGMVRCDTAV 230
Query: 118 CSRYYRAPELI---FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ Y +PE++ G Y D WS G L E+L+G F +S V +I+
Sbjct: 231 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 286
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 51/259 (19%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFY 62
L HPN++ + + F D + L+LE+ P +++ ++ H + ++ +++
Sbjct: 72 LRHPNILRMYNYFH-----DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---- 122
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
++ AL Y H V HRDIKP+NLL+ + +LK+ DFG + V + Y
Sbjct: 123 ELADALHYCHER-KVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDY 179
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
PE+I G T + +D+W AG + E L+G P F S + I+ V
Sbjct: 180 LPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV---------- 228
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDE 242
+ KFP + + DL+S+LL+Y P R + HP+
Sbjct: 229 -------DLKFPPF------------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV-- 267
Query: 243 LRDPNTRLPNGRFLPPLFN 261
N+R R LPP++
Sbjct: 268 --KANSR----RVLPPVYQ 280
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 44 HHYKMSQR-MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG 102
H Y M Q P Y +IC L +H + +RD+KP+N+L++ H H +++ D G
Sbjct: 274 HIYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGH-IRISDLG 331
Query: 103 SAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESG 162
A + +G+ + + Y APE++ YT + D W+ GC+L E++ GQ F
Sbjct: 332 LAVHVPEGQTIKGRVGTVGYMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPF----- 385
Query: 163 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQ 222
Q + IK REE++ + +K P + + +R P+A L S+LL
Sbjct: 386 -QQRKKKIK------REEVERL-----------VKEVP--EEYSERFSPQARSLCSQLLC 425
Query: 223 YSPNLR-----STALEALIHPFFDELRDPNTRLPNGRFLPPLFNFKP 264
P R +A E HP F +L RL G PP FKP
Sbjct: 426 KDPAERLGCRGGSAREVKEHPLFKKLN--FKRLGAGMLEPP---FKP 467
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 40/243 (16%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 61
RLL HPN+V L S +E+ YL L E ++ Y
Sbjct: 58 RLLKHPNIVRLHD---SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHC-----I 109
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPN--ISYI 117
QI ++ + H G+ HRD+KP+NLL+ + +KL DFG A + V+G+ +
Sbjct: 110 QQILESVNHCHLN-GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFA 167
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ Y +PE + Y +D+W+ G +L LL+G P F E +L + IK
Sbjct: 168 GTPGYLSPE-VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA----- 220
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
+ FP + W + PEA DL++++L +P R TA EAL H
Sbjct: 221 -----------GAYDFP---SPEWDTV-----TPEAKDLINKMLTINPAKRITASEALKH 261
Query: 238 PFF 240
P+
Sbjct: 262 PWI 264
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 40/243 (16%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 61
RLL HPN+V L S +E+ YL L E ++ Y
Sbjct: 58 RLLKHPNIVRLHD---SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHC-----I 109
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPN--ISYI 117
QI ++ + H G+ HRD+KP+NLL+ + +KL DFG A + V+G+ +
Sbjct: 110 QQILESVNHCHLN-GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFA 167
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ Y +PE + Y +D+W+ G +L LL+G P F E +L + IK
Sbjct: 168 GTPGYLSPE-VLRKDPYGKPVDMWACGVILYILLVGYPPFWDED-QHRLYQQIKA----- 220
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
+ FP + W + PEA DL++++L +P R TA EAL H
Sbjct: 221 -----------GAYDFP---SPEWDTV-----TPEAKDLINKMLTINPAKRITASEALKH 261
Query: 238 PFF 240
P+
Sbjct: 262 PWI 264
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 112/255 (43%), Gaps = 49/255 (19%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
+R HPN+++LK + D Y+ +V E E + ++++ + + +
Sbjct: 70 LRYGQHPNIITLKDVY-----DDGKYVYVVTELXKGGELLDKILRQKFFSEREASAV--- 121
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLV-----NPHTHQLKLCDFGSAKVLVKGEPN 113
+ I + + Y+H GV HRD+KP N+L NP + +++CDFG AK L
Sbjct: 122 --LFTITKTVEYLHAQ-GVVHRDLKPSNILYVDESGNPES--IRICDFGFAKQLRAENGL 176
Query: 114 ISYIC-SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLG-QPLFPGESGVDQLVEIIK 171
+ C + + APE + Y AA DIWS G +L L G P G D EI+
Sbjct: 177 LXTPCYTANFVAPE-VLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD--DTPEEILA 233
Query: 172 VLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTA 231
+G+ KF + W+ + A DLVS+ L P+ R TA
Sbjct: 234 RIGSG---------------KF-SLSGGYWNSV-----SDTAKDLVSKXLHVDPHQRLTA 272
Query: 232 LEALIHPF---FDEL 243
L HP+ +D+L
Sbjct: 273 ALVLRHPWIVHWDQL 287
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 32/183 (17%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR 123
+ A++++H + HRD+KP+N+L++ + Q++L DFG + L GE + Y
Sbjct: 209 LLEAVSFLHAN-NIVHRDLKPENILLDDNM-QIRLSDFGFSCHLEPGEKLRELCGTPGYL 266
Query: 124 APELIFGATE-----YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
APE++ + + Y +D+W+ G +L LL G P F + L I
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMI--------- 317
Query: 179 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHP 238
M Y +F P+ W DL+SRLLQ P R TA +AL HP
Sbjct: 318 -----MEGQY-QFSSPE-----WDD-----RSSTVKDLISRLLQVDPEARLTAEQALQHP 361
Query: 239 FFD 241
FF+
Sbjct: 362 FFE 364
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKL 59
R L HPN+V K + T +L +V+EY E R+ + R +
Sbjct: 70 RSLRHPNIVRFKEVILTPT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARF 119
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPH-THQLKLCDFGSAKVLVKGEPNISYIC 118
+F Q+ ++Y H + VCHRD+K +N L++ +LK+CDFG +K V S +
Sbjct: 120 FFQQLISGVSYCH-AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVG 178
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLG 153
+ Y APE++ D+WS G L +L+G
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKL 59
R L HPN+V K + T +L +V+EY E R+ + R +
Sbjct: 69 RSLRHPNIVRFKEVILTPT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARF 118
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPH-THQLKLCDFGSAKVLVKGEPNISYIC 118
+F Q+ ++Y H + VCHRD+K +N L++ +LK+CDFG +K V S +
Sbjct: 119 FFQQLISGVSYCH-AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVG 177
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLG 153
+ Y APE++ D+WS G L +L+G
Sbjct: 178 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 112/262 (42%), Gaps = 59/262 (22%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR H NVV + + S DEL++ V+E++ I H +M++ +
Sbjct: 96 MRDYHHDNVVDM---YSSYLVGDELWV--VMEFLEGGALTDIVTHTRMNEEQ----IATV 146
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
+ RAL+Y+HN GV HRDIK ++L+ ++KL DFG + K P +
Sbjct: 147 CLSVLRALSYLHNQ-GVIHRDIKSDSILLTSDG-RIKLSDFGFCAQVSKEVPKRKXLVGT 204
Query: 121 -YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
Y+ APE+I Y +DIWS G ++ E++ G+P +
Sbjct: 205 PYWMAPEVI-SRLPYGTEVDIWSLGIMVIEMIDGEPPY---------------------- 241
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDL--VSRLLQ--------YSPNLRS 229
F P ++A + + +PP DL VS +L+ P+ R+
Sbjct: 242 -----------FNEPPLQA---MRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRA 287
Query: 230 TALEALIHPFFDELRDPNTRLP 251
TA E L HPF P+ +P
Sbjct: 288 TAQELLGHPFLKLAGPPSCIVP 309
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 110/233 (47%), Gaps = 33/233 (14%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ L+HP +V+L + F +DE + +V++ + + +++H + + VKL+
Sbjct: 69 MQGLEHPFLVNLWYSF-----QDEEDMFMVVDLL---LGGDLRYHLQQNVHFKEETVKLF 120
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
++ AL Y+ N + HRD+KP N+L++ H H + + DF A +L + + ++
Sbjct: 121 ICELVMALDYLQNQ-RIIHRDMKPDNILLDEHGH-VHITDFNIAAMLPRETQITTMAGTK 178
Query: 121 YYRAPELIFG--ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP-- 176
Y APE+ Y+ A+D WS G ELL G+ + S EI+ T
Sbjct: 179 PYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHTFETTVV 237
Query: 177 ------TREEI----KCMNPN----YTEF----KFPQIKAHPWHKIFQKRMPP 211
++E + K + PN +++ FP + W +FQKR+ P
Sbjct: 238 TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAVFQKRLIP 290
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 43/244 (17%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
++L HP+++ L + ++ + +V+EYV E + K + R+ +
Sbjct: 70 LKLFRHPHIIKLYQVISTPSD-----IFMVMEYVSGGELFDYICK-----NGRLDEKESR 119
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
F QI + Y H + V HRD+KP+N+L++ H + K+ DFG + ++ GE
Sbjct: 120 RLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRXSCG 177
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
S Y APE+I G +DIWS+G +L LL G F + PT
Sbjct: 178 SPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH-------------VPTL 224
Query: 179 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHP 238
+ C YT PQ + P + L+ +LQ P R+T + H
Sbjct: 225 FKKICDGIFYT----PQY------------LNPSVISLLKHMLQVDPMKRATIKDIREHE 268
Query: 239 FFDE 242
+F +
Sbjct: 269 WFKQ 272
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 17/177 (9%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY--VKLYF 61
++HP VV L + F + E L L+L+++ R ++S+ + VK Y
Sbjct: 87 VNHPFVVKLHYAF-----QTEGKLYLILDFL-----RGGDLFTRLSKEVMFTEEDVKFYL 136
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 121
++ L ++H ++G+ +RD+KP+N+L++ H +KL DFG +K + E C
Sbjct: 137 AELALGLDHLH-SLGIIYRDLKPENILLDEEGH-IKLTDFGLSKEAIDHEKKAYSFCGTV 194
Query: 122 -YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV-LGTP 176
Y APE++ ++ + D WS G ++ E+L G F G+ + + I+K LG P
Sbjct: 195 EYMAPEVV-NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP 250
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 116/264 (43%), Gaps = 59/264 (22%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY---- 60
DHPNV+ + +E + +L + LE + +++ + + L K Y
Sbjct: 67 DHPNVIR-----YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKL--QKEYNPIS 119
Query: 61 -FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTH------------QLKLCDFGSAKVL 107
QI +A++H ++ + HRD+KPQN+LV+ + ++ + DFG K L
Sbjct: 120 LLRQIASGVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 108 VKGEPNISY-----ICSRYYRAPELIFGATEY------TAAIDIWSAGCVLAELLLGQPL 156
G+ + + +RAPEL+ + T +IDI+S GCV +L +
Sbjct: 179 DSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKGK 237
Query: 157 FPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDL 216
P + II+ G + +E+KC++ + + EA DL
Sbjct: 238 HPFGDKYSRESNIIR--GIFSLDEMKCLH--------------------DRSLIAEATDL 275
Query: 217 VSRLLQYSPNLRSTALEALIHPFF 240
+S+++ + P R TA++ L HP F
Sbjct: 276 ISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 31/193 (16%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNP--HTHQLKLCDF--GSAKVLVKG-----EPNI 114
+ AL ++H T G+ HRD+KP+N+L +K+CDF GS L P +
Sbjct: 120 VAAALDFLH-TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPEL 178
Query: 115 SYIC-SRYYRAPELI----FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVD---QL 166
+ C S Y APE++ AT Y D+WS G VL +L G P F G G D
Sbjct: 179 TTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDR 238
Query: 167 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPN 226
E+ +V E I+ +++FP W I EA DL+S+LL
Sbjct: 239 GEVCRVCQNKLFESIQ-----EGKYEFPD---KDWAHI-----SSEAKDLISKLLVRDAK 285
Query: 227 LRSTALEALIHPF 239
R +A + L HP+
Sbjct: 286 QRLSAAQVLQHPW 298
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 116/258 (44%), Gaps = 30/258 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+R L H NV+ L ++ EK ++Y+ V+EY + ++ +R P+ Y
Sbjct: 60 LRRLRHKNVIQLVDVLYNE-EKQKMYM--VMEYCVCGMQEMLDS--VPEKRFPVCQAHGY 114
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYI 117
F Q+ L Y+H+ G+ H+DIKP NLL+ LK+ G A+ L + +
Sbjct: 115 FCQLIDGLEYLHSQ-GIVHKDIKPGNLLLT-TGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 118 CSRYYRAPELIFGATEYTA-AIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV---- 172
S ++ PE+ G ++ +DIWSAG L + G F G++ + +L E I
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-IYKLFENIGKGSYA 231
Query: 173 ----LGTPTREEIKCM---NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSP 225
G P + +K M P F QI+ H W F+K+ PP + + SP
Sbjct: 232 IPGDCGPPLSDLLKGMLEYEPA-KRFSIRQIRQHSW---FRKKHPPAEAPVP---IPPSP 284
Query: 226 NLRSTALEALIHPFFDEL 243
+ + + P+ ++L
Sbjct: 285 DTKDRWRSMTVVPYLEDL 302
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 27/200 (13%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQL---KLCDFG-SAKVLVKGE------PN 113
+ AL ++HN G+ HRD+KP+N+L H +Q+ K+CDFG + + + G+ P
Sbjct: 120 VASALDFLHNK-GIAHRDLKPENILCE-HPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 114 ISYIC-SRYYRAPELIFGATE----YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
+ C S Y APE++ +E Y D+WS G +L LL G P F G G D +
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD 237
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
+ P + + + +++FP W I A DL+S+LL R
Sbjct: 238 --RGEACPACQNMLFESIQEGKYEFPD---KDWAHI-----SCAAKDLISKLLVRDAKQR 287
Query: 229 STALEALIHPFFDELRDPNT 248
+A + L HP+ NT
Sbjct: 288 LSAAQVLQHPWVQGCAPENT 307
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 53/230 (23%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVN------------------------PH 92
+KLY +I +AL Y+ + + H D+KP+N+L++
Sbjct: 139 IKLYCIEILKALNYLRK-MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTK 197
Query: 93 THQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLL 152
+ +KL DFG A K + + S I +R YRAPE+I + + D+WS GCVLAEL
Sbjct: 198 STGIKLIDFGCATF--KSDYHGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYT 254
Query: 153 GQPLFPGESGVDQLVEIIKVL----------GTPTREEIKCMNPNYTEFKFPQ------- 195
G LF ++ L + ++ T T K +N + + +P+
Sbjct: 255 GSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGS-KYVNKDELKLAWPENASSINS 313
Query: 196 ----IKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFD 241
K P +KI + + D + +LQ P LR + E L H F +
Sbjct: 314 IKHVKKCLPLYKIIKHEL---FCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYVP
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE--- 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +K+ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IKVADF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--K 109
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 158
Query: 110 GEPNISYICSRY-YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 216
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
Y+++K + +PW KI + L+ ++L +P+ R
Sbjct: 217 -------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSAR 252
Query: 229 ST 230
T
Sbjct: 253 IT 254
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--K 109
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 158
Query: 110 GEPNISYICSRY-YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 216
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
Y+++K + +PW KI + L+ ++L +P+ R
Sbjct: 217 -------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSAR 252
Query: 229 ST 230
T
Sbjct: 253 IT 254
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--K 109
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 159
Query: 110 GEPNISYICSRY-YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 217
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
Y+++K + +PW KI + L+ ++L +P+ R
Sbjct: 218 -------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSAR 253
Query: 229 ST 230
T
Sbjct: 254 IT 255
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 8/163 (4%)
Query: 1 MRLLDHPNVVSLKHC--FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 58
M+ L+HPNVVS + ++L L L +EY R + ++ + ++
Sbjct: 67 MKKLNHPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIR 125
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQL--KLCDFGSAKVLVKGEPNISY 116
I AL Y+H + HRD+KP+N+++ P +L K+ D G AK L +GE +
Sbjct: 126 TLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF 184
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLG-QPLFP 158
+ + Y APEL+ +YT +D WS G + E + G +P P
Sbjct: 185 VGTLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 8/163 (4%)
Query: 1 MRLLDHPNVVSLKHC--FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 58
M+ L+HPNVVS + ++L L L +EY R + ++ + ++
Sbjct: 66 MKKLNHPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIR 124
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQL--KLCDFGSAKVLVKGEPNISY 116
I AL Y+H + HRD+KP+N+++ P +L K+ D G AK L +GE +
Sbjct: 125 TLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF 183
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLG-QPLFP 158
+ + Y APEL+ +YT +D WS G + E + G +P P
Sbjct: 184 VGTLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 106/242 (43%), Gaps = 40/242 (16%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 61
RLL H N+V L S +E+ YL L E ++ Y
Sbjct: 58 RLLKHSNIVRLHD---SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHC-----I 109
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPN--ISYI 117
QI A+ + H +GV HRD+KP+NLL+ +KL DFG A + V+G+ +
Sbjct: 110 QQILEAVLHCHQ-MGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFA 167
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ Y +PE + Y +DIW+ G +L LL+G P F E +L + IK
Sbjct: 168 GTPGYLSPE-VLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQIKA----- 220
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
+ FP + W + PEA +L++++L +P R TA EAL H
Sbjct: 221 -----------GAYDFP---SPEWDTV-----TPEAKNLINQMLTINPAKRITAHEALKH 261
Query: 238 PF 239
P+
Sbjct: 262 PW 263
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 23/163 (14%)
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 125
+AL ++ + + HRDIKP N+L++ + +KLCDFG + LV R Y AP
Sbjct: 136 KALNHLKENLKIIHRDIKPSNILLD-RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAP 194
Query: 126 ELIFGATE---YTAAIDIWSAGCVLAELLLGQPLFPGESGV-DQLVEIIKVLGTP---TR 178
E I + Y D+WS G L EL G+ +P + V DQL +++K G P +
Sbjct: 195 ERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GDPPQLSN 252
Query: 179 EEIKCMNPNYTEF-------------KFPQIKAHPWHKIFQKR 208
E + +P++ F K+ ++ HP+ ++++R
Sbjct: 253 SEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEER 295
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--K 109
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 100 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 157
Query: 110 GEPNISYICSRY-YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 215
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
Y+++K + +PW KI + L+ ++L +P+ R
Sbjct: 216 -------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSAR 251
Query: 229 ST 230
T
Sbjct: 252 IT 253
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--K 109
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 158
Query: 110 GEPNISYICSRY-YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 216
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
Y+++K + +PW KI + L+ ++L +P+ R
Sbjct: 217 -------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSAR 252
Query: 229 ST 230
T
Sbjct: 253 IT 254
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 107/242 (44%), Gaps = 40/242 (16%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 61
RLL HPN+V L S +E+ YL L E ++ Y
Sbjct: 85 RLLKHPNIVRLHD---SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHC-----I 136
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPN--ISYI 117
+QI ++ +IH + HRD+KP+NLL+ +KL DFG A + V+GE +
Sbjct: 137 HQILESVNHIHQH-DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFA 194
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ Y +PE + Y +DIW+ G +L LL+G P F E +L + IK
Sbjct: 195 GTPGYLSPE-VLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQIKA----- 247
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
+ FP + W + PEA +L++++L +P R TA +AL H
Sbjct: 248 -----------GAYDFP---SPEWDTV-----TPEAKNLINQMLTINPAKRITADQALKH 288
Query: 238 PF 239
P+
Sbjct: 289 PW 290
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--K 109
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 159
Query: 110 GEPNISYICSRY-YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 217
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
Y+++K + +PW KI + L+ ++L +P+ R
Sbjct: 218 -------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSAR 253
Query: 229 ST 230
T
Sbjct: 254 IT 255
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--K 109
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 158
Query: 110 GEPNISYICSRY-YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 216
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
Y+++K + +PW KI + L+ ++L +P+ R
Sbjct: 217 -------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSAR 252
Query: 229 ST 230
T
Sbjct: 253 IT 254
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--K 109
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 158
Query: 110 GEPNISYICSRY-YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 216
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
Y+++K + +PW KI + L+ ++L +P+ R
Sbjct: 217 -------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSAR 252
Query: 229 ST 230
T
Sbjct: 253 IT 254
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ ++ P +V L++ F KD L +V+EYVP + H + R + + Y
Sbjct: 95 LQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFY 146
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGT 201
Query: 121 -YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV-KGEPNISYI 117
Y +I AL ++H G+ +RD+KP+N+++N H +KL DFG K + G ++
Sbjct: 125 FYLAEISMALGHLHQK-GIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHTFC 182
Query: 118 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ Y APE++ + + A+D WS G ++ ++L G P F GE+ + +I+K
Sbjct: 183 GTIEYMAPEILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC----- 236
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR-----STAL 232
K P Y + EA DL+ +LL+ + R A
Sbjct: 237 ----KLNLPPY--------------------LTQEARDLLKKLLKRNAASRLGAGPGDAG 272
Query: 233 EALIHPFF 240
E HPFF
Sbjct: 273 EVQAHPFF 280
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--K 109
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 158
Query: 110 GEPNISYICSRY-YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 216
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
Y+++K + +PW KI + L+ ++L +P+ R
Sbjct: 217 -------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSAR 252
Query: 229 ST 230
T
Sbjct: 253 IT 254
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--K 109
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 158
Query: 110 GEPNISYICSRY-YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 216
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
Y+++K + +PW KI + L+ ++L +P+ R
Sbjct: 217 -------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSAR 252
Query: 229 ST 230
T
Sbjct: 253 IT 254
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--K 109
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 159
Query: 110 GEPNISYICSRY-YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 217
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
Y+++K + +PW KI + L+ ++L +P+ R
Sbjct: 218 -------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSAR 253
Query: 229 ST 230
T
Sbjct: 254 IT 255
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ ++ P +V L++ F KD L +V+EYVP + H + R + + Y
Sbjct: 95 LQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFY 146
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGT 201
Query: 121 -YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--K 109
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 159
Query: 110 GEPNISYICSRY-YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 217
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
Y+++K + +PW KI + L+ ++L +P+ R
Sbjct: 218 -------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSAR 253
Query: 229 ST 230
T
Sbjct: 254 IT 255
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 45/241 (18%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
HP + +LK+ F T ++ L V+EY + H + + Y +I
Sbjct: 69 HPFLTALKYSF-QTHDR----LCFVMEYANGGE---LFFHLSRERVFSEDRARFYGAEIV 120
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRA 124
AL Y+H+ V +RD+K +NL+++ H +K+ DFG K +K + C Y A
Sbjct: 121 SALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLA 179
Query: 125 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 184
PE + +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 180 PE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR-- 229
Query: 185 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR-----STALEALIHPF 239
F + + PEA L+S LL+ P R A E + H F
Sbjct: 230 --------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 269
Query: 240 F 240
F
Sbjct: 270 F 270
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ ++ P +V L++ F KD L +V+EYVP + H + R + + Y
Sbjct: 95 LQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFY 146
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGT 201
Query: 121 -YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--K 109
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 159
Query: 110 GEPNISYICSRY-YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 217
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
Y+++K + +PW KI + L+ ++L +P+ R
Sbjct: 218 -------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSAR 253
Query: 229 ST 230
T
Sbjct: 254 IT 255
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--K 109
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 159
Query: 110 GEPNISYICSRY-YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 217
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
Y+++K + +PW KI + L+ ++L +P+ R
Sbjct: 218 -------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSAR 253
Query: 229 ST 230
T
Sbjct: 254 IT 255
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--K 109
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 159
Query: 110 GEPNISYICSRY-YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 217
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
Y+++K + +PW KI + L+ ++L +P+ R
Sbjct: 218 -------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSAR 253
Query: 229 ST 230
T
Sbjct: 254 IT 255
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 45/241 (18%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
HP + +LK+ F T ++ L V+EY + H + + Y +I
Sbjct: 67 HPFLTALKYSF-QTHDR----LCFVMEYANGGE---LFFHLSRERVFSEDRARFYGAEIV 118
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRA 124
AL Y+H+ V +RD+K +NL+++ H +K+ DFG K +K + C Y A
Sbjct: 119 SALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLA 177
Query: 125 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 184
PE + +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 178 PE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR-- 227
Query: 185 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR-----STALEALIHPF 239
F + + PEA L+S LL+ P R A E + H F
Sbjct: 228 --------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 267
Query: 240 F 240
F
Sbjct: 268 F 268
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--K 109
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNN 158
Query: 110 GEPNISYICSRY-YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
E ++ +C Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE 216
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
Y+++K + +PW KI + L+ ++L +P+ R
Sbjct: 217 -------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSAR 252
Query: 229 ST 230
T
Sbjct: 253 IT 254
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 45/241 (18%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
HP + +LK+ F T ++ L V+EY + H + + Y +I
Sbjct: 68 HPFLTALKYSF-QTHDR----LCFVMEYANGGE---LFFHLSRERVFSEDRARFYGAEIV 119
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRA 124
AL Y+H+ V +RD+K +NL+++ H +K+ DFG K +K + C Y A
Sbjct: 120 SALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLA 178
Query: 125 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 184
PE + +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 179 PE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR-- 228
Query: 185 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR-----STALEALIHPF 239
F + + PEA L+S LL+ P R A E + H F
Sbjct: 229 --------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 268
Query: 240 F 240
F
Sbjct: 269 F 269
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 121
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 131 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 189
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y + D+WS G ++ LL G P F G + G TR +
Sbjct: 190 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 242
Query: 182 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF-F 240
+++FP + W ++ + E L+ LL+ P R T E + HP+
Sbjct: 243 -------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPWIM 287
Query: 241 DELRDPNTRLPNGRFL 256
+ P T L R L
Sbjct: 288 QSTKVPQTPLHTSRVL 303
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 115/264 (43%), Gaps = 59/264 (22%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY---- 60
DHPNV+ + +E + +L + LE + +++ + + L K Y
Sbjct: 67 DHPNVIR-----YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKL--QKEYNPIS 119
Query: 61 -FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTH------------QLKLCDFGSAKVL 107
QI +A++H ++ + HRD+KPQN+LV+ + ++ + DFG K L
Sbjct: 120 LLRQIASGVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 108 VKGEPNISY-----ICSRYYRAPELIFGATEY------TAAIDIWSAGCVLAELLLGQPL 156
G+ + +RAPEL+ + T +IDI+S GCV +L +
Sbjct: 179 DSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKGK 237
Query: 157 FPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDL 216
P + II+ G + +E+KC++ + + EA DL
Sbjct: 238 HPFGDKYSRESNIIR--GIFSLDEMKCLH--------------------DRSLIAEATDL 275
Query: 217 VSRLLQYSPNLRSTALEALIHPFF 240
+S+++ + P R TA++ L HP F
Sbjct: 276 ISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 121
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 130 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 188
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y + D+WS G ++ LL G P F G + G TR +
Sbjct: 189 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 241
Query: 182 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF-F 240
+++FP + W ++ + E L+ LL+ P R T E + HP+
Sbjct: 242 -------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPWIM 286
Query: 241 DELRDPNTRLPNGRFL 256
+ P T L R L
Sbjct: 287 QSTKVPQTPLHTSRVL 302
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +VLEY P
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGE--- 128
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +K+ DF
Sbjct: 129 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IKVADF 186
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 187 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 37/190 (19%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ Y +I AL Y+H+ V +RD+K +NL+++ H +K+ DFG K +K +
Sbjct: 253 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKT 311
Query: 117 ICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
C Y APE + +Y A+D W G V+ E++ G+ F + ++L E+I +
Sbjct: 312 FCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM--- 366
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR-----ST 230
E +FP+ + PEA L+S LL+ P R
Sbjct: 367 -------------EEIRFPRT------------LGPEAKSLLSGLLKKDPKQRLGGGSED 401
Query: 231 ALEALIHPFF 240
A E + H FF
Sbjct: 402 AKEIMQHRFF 411
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 121
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 124 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 182
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y + D+WS G ++ LL G P F G + G TR +
Sbjct: 183 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 235
Query: 182 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF-F 240
+++FP + W ++ + E L+ LL+ P R T E + HP+
Sbjct: 236 -------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPWIM 280
Query: 241 DELRDPNTRLPNGRFL 256
+ P T L R L
Sbjct: 281 QSTKVPQTPLHTSRVL 296
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 121
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 125 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 183
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y + D+WS G ++ LL G P F G + G TR +
Sbjct: 184 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 236
Query: 182 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF-F 240
+++FP + W ++ + E L+ LL+ P R T E + HP+
Sbjct: 237 -------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPWIM 281
Query: 241 DELRDPNTRLPNGRFL 256
+ P T L R L
Sbjct: 282 QSTKVPQTPLHTSRVL 297
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 37/190 (19%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ Y +I AL Y+H+ V +RD+K +NL+++ H +K+ DFG K +K +
Sbjct: 250 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKT 308
Query: 117 ICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
C Y APE + +Y A+D W G V+ E++ G+ F + ++L E+I +
Sbjct: 309 FCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM--- 363
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR-----ST 230
EEI+ F + + PEA L+S LL+ P R
Sbjct: 364 ---EEIR----------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSED 398
Query: 231 ALEALIHPFF 240
A E + H FF
Sbjct: 399 AKEIMQHRFF 408
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L HPN + + C+ E LV+EY + +++ H K Q + + V
Sbjct: 108 LQKLRHPNTIQYRGCYLR-----EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVT-- 160
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
+ + LAY+H+ + HRD+K N+L++ +KL DFGSA ++ P ++ +
Sbjct: 161 -HGALQGLAYLHSH-NMIHRDVKAGNILLS-EPGLVKLGDFGSASIMA---PANXFVGTP 214
Query: 121 YYRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQP 155
Y+ APE+I E Y +D+WS G EL +P
Sbjct: 215 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 251
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 121
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 126 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 184
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y + D+WS G ++ LL G P F G + G TR +
Sbjct: 185 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 237
Query: 182 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF-F 240
+++FP + W ++ + E L+ LL+ P R T E + HP+
Sbjct: 238 -------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPWIM 282
Query: 241 DELRDPNTRLPNGRFL 256
+ P T L R L
Sbjct: 283 QSTKVPQTPLHTSRVL 298
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 121
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 132 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 190
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y + D+WS G ++ LL G P F G + G TR +
Sbjct: 191 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 243
Query: 182 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF-F 240
+++FP + W ++ + E L+ LL+ P R T E + HP+
Sbjct: 244 -------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPWIM 288
Query: 241 DELRDPNTRLPNGRFL 256
+ P T L R L
Sbjct: 289 QSTKVPQTPLHTSRVL 304
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 38/188 (20%)
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
Y +I AL ++H G+ +RD+KP+N+++N H +KL DFG K + C
Sbjct: 125 FYLAEISMALGHLHQK-GIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHXFC 182
Query: 119 SRY-YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
Y APE++ + + A+D WS G ++ ++L G P F GE+ + +I+K
Sbjct: 183 GTIEYMAPEILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC----- 236
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR-----STAL 232
K P Y + EA DL+ +LL+ + R A
Sbjct: 237 ----KLNLPPY--------------------LTQEARDLLKKLLKRNAASRLGAGPGDAG 272
Query: 233 EALIHPFF 240
E HPFF
Sbjct: 273 EVQAHPFF 280
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 121
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 126 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 184
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y + D+WS G ++ LL G P F G + I + T R
Sbjct: 185 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG----LAISPGMKTRIR--- 236
Query: 182 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF-F 240
+++FP + W ++ + E L+ LL+ P R T E + HP+
Sbjct: 237 ------MGQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPWIM 282
Query: 241 DELRDPNTRLPNGRFL 256
+ P T L R L
Sbjct: 283 QSTKVPQTPLHTSRVL 298
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 121
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 170 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 228
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y + D+WS G ++ LL G P F G + I + T R
Sbjct: 229 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG----LAISPGMKTRIR--- 280
Query: 182 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF-F 240
+++FP + W ++ + E L+ LL+ P R T E + HP+
Sbjct: 281 ------MGQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPWIM 326
Query: 241 DELRDPNTRLPNGRFL 256
+ P T L R L
Sbjct: 327 QSTKVPQTPLHTSRVL 342
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 121
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 176 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 234
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y + D+WS G ++ LL G P F G + I + T R
Sbjct: 235 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG----LAISPGMKTRIR--- 286
Query: 182 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF-F 240
+++FP + W ++ + E L+ LL+ P R T E + HP+
Sbjct: 287 ------MGQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPWIM 332
Query: 241 DELRDPNTRLPNGRFL 256
+ P T L R L
Sbjct: 333 QSTKVPQTPLHTSRVL 348
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L HPN + + C+ E LV+EY + +++ H K Q + + V
Sbjct: 69 LQKLRHPNTIQYRGCYLR-----EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVT-- 121
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
+ + LAY+H+ + HRD+K N+L++ +KL DFGSA ++ P ++ +
Sbjct: 122 -HGALQGLAYLHSH-NMIHRDVKAGNILLS-EPGLVKLGDFGSASIMA---PANXFVGTP 175
Query: 121 YYRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQP 155
Y+ APE+I E Y +D+WS G EL +P
Sbjct: 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 212
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 121
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 140 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 198
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y + D+WS G ++ LL G P F G + G TR +
Sbjct: 199 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 251
Query: 182 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF-F 240
+++FP + W ++ + E L+ LL+ P R T E + HP+
Sbjct: 252 -------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPWIM 296
Query: 241 DELRDPNTRLPNGRFL 256
+ P T L R L
Sbjct: 297 QSTKVPQTPLHTSRVL 312
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EY+P
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGD--- 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +K+ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IKVADF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EY+P
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGD--- 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +K+ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IKVADF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 39/252 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR H NVV + + E L +++E++ I ++++ +
Sbjct: 96 MRDYQHFNVVEMYKSYLVGEE-----LWVLMEFLQGGALTDIVSQVRLNEEQ----IATV 146
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
+ +ALAY+H GV HRDIK ++L+ ++KL DFG + K P +
Sbjct: 147 CEAVLQALAYLHAQ-GVIHRDIKSDSILLTLDG-RVKLSDFGFCAQISKDVPKRKXLVGT 204
Query: 121 -YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
Y+ APE+I + Y +DIWS G ++ E++ G+P + +S V + +
Sbjct: 205 PYWMAPEVI-SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM------------K 251
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
++ P P++K HK+ P D + R+L P R+TA E L HPF
Sbjct: 252 RLRDSPP-------PKLKNS--HKV-----SPVLRDFLERMLVRDPQERATAQELLDHPF 297
Query: 240 FDELRDPNTRLP 251
+ P +P
Sbjct: 298 LLQTGLPECLVP 309
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYVP
Sbjct: 92 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE--- 148
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 149 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 206
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 207 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYVP
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE--- 128
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 129 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 186
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 187 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 86/196 (43%), Gaps = 26/196 (13%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 121
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + Y
Sbjct: 124 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPY 182
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y + D+WS G ++ LL G P F G + G TR +
Sbjct: 183 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 235
Query: 182 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF-F 240
+++FP + W ++ + E L+ LL+ P R T E + HP+
Sbjct: 236 -------GQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPWIM 280
Query: 241 DELRDPNTRLPNGRFL 256
+ P T L R L
Sbjct: 281 QSTKVPQTPLHTSRVL 296
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKL 59
++L+HPN+V L F E ++ L LV EY E ++ H R +
Sbjct: 68 KVLNHPNIVKL----FEVIETEKT-LYLVXEYASGGEVFDYLVAHG-----RXKEKEARA 117
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F QI A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ +
Sbjct: 118 KFRQIVSAVQYCHQKF-IVHRDLKAENLLLDADXN-IKIADFGFSNEFTFGNKLDAFCGA 175
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
Y APEL G +D+WS G +L L+ G F G++
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYVP
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE--- 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYVP
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE--- 128
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 129 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 186
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 187 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYVP
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE--- 128
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 129 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 186
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 187 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYVP
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE--- 128
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 129 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 186
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 187 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYVP
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE--- 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYVP
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE--- 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ ++ P +V L+ F KD L +V+EYVP + H + R + + Y
Sbjct: 88 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFY 139
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 140 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGT 194
Query: 121 -YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 195 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ ++ P +V L+ F KD L +V+EYVP + H + R + + Y
Sbjct: 96 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFY 147
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 148 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRTWT--LCGT 202
Query: 121 -YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 203 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKL 59
R L HPN+V K + T +L +V+EY E R+ + R +
Sbjct: 70 RSLRHPNIVRFKEVILTPT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARF 119
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPH-THQLKLCDFGSAKVLVKGEPNISYIC 118
+F Q+ ++Y H + VCHRD+K +N L++ +LK+C FG +K V S +
Sbjct: 120 FFQQLISGVSYCH-AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVG 178
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLG 153
+ Y APE++ D+WS G L +L+G
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+ LLD P ++ H F T ++ L V+EYV + +H + + Y
Sbjct: 73 LALLDKPPFLTQLHSCFQTVDR----LYFVMEYVNGGD---LMYHIQQVGKFKEPQAVFY 125
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKV-LVKGEPNISYICS 119
+I L ++H G+ +RD+K N++++ H +K+ DFG K ++ G + +
Sbjct: 126 AAEISIGLFFLHKR-GIIYRDLKLDNVMLDSEGH-IKIADFGMCKEHMMDGVTTREFCGT 183
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
Y APE+I Y ++D W+ G +L E+L GQP F GE D+L + I
Sbjct: 184 PDYIAPEII-AYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED-EDELFQSI 232
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ ++ P +V L+ F KD L +V+EYVP + H + R + + Y
Sbjct: 81 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFY 132
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG + +
Sbjct: 133 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR-TWTLCGTP 188
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 189 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYVP
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE--- 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFXEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYVP
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE--- 128
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 129 MFSHLRRIGRFXEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 186
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 187 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYVP
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE--- 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFXEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYVP
Sbjct: 64 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE--- 120
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 121 MFSHLRRIGRFXEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 178
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 179 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EY P
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE--- 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NL+++ + +K+ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EY P
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE--- 128
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NL+++ + +K+ DF
Sbjct: 129 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDF 186
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 187 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EY P
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGE--- 128
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NL+++ + +K+ DF
Sbjct: 129 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDF 186
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 187 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EY P
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGE--- 128
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NL+++ + +K+ DF
Sbjct: 129 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDF 186
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 187 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 55/268 (20%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYV--PETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
HP + +LK+ F T ++ L V+EY E + + +R + Y +
Sbjct: 64 HPFLTALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAE 113
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YY 122
I AL Y+H+ V +RDIK +NL+++ H +K+ DFG K + + C Y
Sbjct: 114 IVSALEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
APE + +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 172 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR 223
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR-----STALEALIH 237
F + + PEA L++ LL+ P R S A E + H
Sbjct: 224 ----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 238 PFFDELRDPNTRLPNGRFLPPLFNFKPH 265
FF + + + + LPP FKP
Sbjct: 262 RFFLSINWQD--VVQKKLLPP---FKPQ 284
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ ++ P +V L+ F KD L +V+EY P + H + R + + Y
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGGE---MFSHLRRIGRFSEPHARFY 146
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
QI Y+H ++ + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGLAK-RVKGR--TWXLCGT 201
Query: 121 -YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 55/268 (20%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYV--PETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
HP + +LK+ F T ++ L V+EY E + + +R + Y +
Sbjct: 69 HPFLTALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAE 118
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YY 122
I AL Y+H+ V +RDIK +NL+++ H +K+ DFG K + + C Y
Sbjct: 119 IVSALEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEY 176
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
APE + +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 177 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR 228
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR-----STALEALIH 237
F + + PEA L++ LL+ P R S A E + H
Sbjct: 229 ----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 266
Query: 238 PFFDELRDPNTRLPNGRFLPPLFNFKPH 265
FF L + + LPP FKP
Sbjct: 267 RFF--LSINWQDVVQKKLLPP---FKPQ 289
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 35/184 (19%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 111
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN- 157
Query: 112 PNISYICSRY-----YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQL 166
N + ++ Y APEL+ + +D+WS G VL +L G+ P + D
Sbjct: 158 -NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSX 214
Query: 167 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPN 226
E Y+++K + +PW KI + L+ ++L +P+
Sbjct: 215 QE-------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPS 250
Query: 227 LRST 230
R T
Sbjct: 251 ARIT 254
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 27/200 (13%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQL---KLCDFG-SAKVLVKGE------PN 113
+ AL ++HN G+ HRD+KP+N+L H +Q+ K+CDF + + + G+ P
Sbjct: 120 VASALDFLHNK-GIAHRDLKPENILCE-HPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 114 ISYIC-SRYYRAPELIFGATE----YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVE 168
+ C S Y APE++ +E Y D+WS G +L LL G P F G G D +
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD 237
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 228
+ P + + + +++FP W I A DL+S+LL R
Sbjct: 238 --RGEACPACQNMLFESIQEGKYEFPD---KDWAHI-----SCAAKDLISKLLVRDAKQR 287
Query: 229 STALEALIHPFFDELRDPNT 248
+A + L HP+ NT
Sbjct: 288 LSAAQVLQHPWVQGCAPENT 307
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EY P
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGE--- 128
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NL+++ + +K+ DF
Sbjct: 129 MFSHLRRIGRFXEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDF 186
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 187 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EY P
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE--- 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NL+++ + +K+ DF
Sbjct: 128 MFSHLRRIGRFXEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 55/268 (20%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYV--PETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
HP + +LK+ F T ++ L V+EY E + + +R + Y +
Sbjct: 64 HPFLTALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAE 113
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YY 122
I AL Y+H+ V +RDIK +NL+++ H +K+ DFG K + + C Y
Sbjct: 114 IVSALEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
APE + +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 172 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR 223
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR-----STALEALIH 237
F + + PEA L++ LL+ P R S A E + H
Sbjct: 224 ----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 238 PFFDELRDPNTRLPNGRFLPPLFNFKPH 265
FF + + + + LPP FKP
Sbjct: 262 RFFLSINWQD--VVQKKLLPP---FKPQ 284
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 55/268 (20%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYV--PETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
HP + +LK+ F T ++ L V+EY E + + +R + Y +
Sbjct: 64 HPFLTALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAE 113
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YY 122
I AL Y+H+ V +RDIK +NL+++ H +K+ DFG K + + C Y
Sbjct: 114 IVSALEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
APE + +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 172 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR 223
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR-----STALEALIH 237
F + + PEA L++ LL+ P R S A E + H
Sbjct: 224 ----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 238 PFFDELRDPNTRLPNGRFLPPLFNFKPH 265
FF + + + + LPP FKP
Sbjct: 262 RFFLSINWQD--VVQKKLLPP---FKPQ 284
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 35/184 (19%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 111
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN- 157
Query: 112 PNISYICSRY-----YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQL 166
N + ++ Y APEL+ + +D+WS G VL +L G+ P + D
Sbjct: 158 -NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSC 214
Query: 167 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPN 226
E Y+++K + +PW KI + L+ ++L +P+
Sbjct: 215 QE-------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPS 250
Query: 227 LRST 230
R T
Sbjct: 251 ARIT 254
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 55/268 (20%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYV--PETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
HP + +LK+ F T ++ L V+EY E + + +R + Y +
Sbjct: 64 HPFLTALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAE 113
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YY 122
I AL Y+H+ V +RDIK +NL+++ H +K+ DFG K + + C Y
Sbjct: 114 IVSALEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEY 171
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
APE + +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 172 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR 223
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR-----STALEALIH 237
F + + PEA L++ LL+ P R S A E + H
Sbjct: 224 ----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 238 PFFDELRDPNTRLPNGRFLPPLFNFKPH 265
FF + + + + LPP FKP
Sbjct: 262 RFFLSINWQD--VVQKKLLPP---FKPQ 284
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 35/184 (19%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 111
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN- 158
Query: 112 PNISYICSRY-----YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQL 166
N + ++ Y APEL+ + +D+WS G VL +L G+ P + D
Sbjct: 159 -NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSC 215
Query: 167 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPN 226
E Y+++K + +PW KI + L+ ++L +P+
Sbjct: 216 QE-------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPS 251
Query: 227 LRST 230
R T
Sbjct: 252 ARIT 255
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 55/268 (20%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYV--PETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
HP + +LK+ F T ++ L V+EY E + + +R + Y +
Sbjct: 67 HPFLTALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAE 116
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YY 122
I AL Y+H+ V +RDIK +NL+++ H +K+ DFG K + + C Y
Sbjct: 117 IVSALEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEY 174
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
APE + +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 175 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR 226
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR-----STALEALIH 237
F + + PEA L++ LL+ P R S A E + H
Sbjct: 227 ----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 264
Query: 238 PFFDELRDPNTRLPNGRFLPPLFNFKPH 265
FF + + + + LPP FKP
Sbjct: 265 RFFLSINWQD--VVQKKLLPP---FKPQ 287
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 55/268 (20%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYV--PETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
HP + +LK+ F T ++ L V+EY E + + +R + Y +
Sbjct: 64 HPFLTALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAE 113
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YY 122
I AL Y+H+ V +RDIK +NL+++ H +K+ DFG K + + C Y
Sbjct: 114 IVSALEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEY 171
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
APE + +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 172 LAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR 223
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR-----STALEALIH 237
F + + PEA L++ LL+ P R S A E + H
Sbjct: 224 ----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 238 PFFDELRDPNTRLPNGRFLPPLFNFKPH 265
FF + + + + LPP FKP
Sbjct: 262 RFFLSINWQD--VVQKKLLPP---FKPQ 284
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 36/241 (14%)
Query: 20 TEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQR----MPLIYVKLYFYQICRALAYIHNT 74
T DE+Y+ + EY+ +++ + ++ + + + +P+ +K + + +YIHN
Sbjct: 113 TNYDEVYI--IYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE 170
Query: 75 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 134
+CHRD+KP N+L++ + ++KL DFG ++ +V + S + + PE + Y
Sbjct: 171 KNICHRDVKPSNILMDKNG-RVKLSDFGESEYMVDKKIKGSR-GTYEFMPPEFFSNESSY 228
Query: 135 TAA-IDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 193
A +DIWS G L + F + LVE+ + T E +
Sbjct: 229 NGAKVDIWSLGICLYVMFYNVVPFSLKIS---LVELFNNIRTKNIE-------------Y 272
Query: 194 PQIKAHPWHKIFQKR-------MPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELRDP 246
P + H + + K+ + E +D + L+ +P R T+ +AL H + L D
Sbjct: 273 PLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEW---LADT 329
Query: 247 N 247
N
Sbjct: 330 N 330
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 35/184 (19%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 111
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN- 157
Query: 112 PNISYICSRY-----YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQL 166
N + ++ Y APEL+ + +D+WS G VL +L G+ P + D
Sbjct: 158 -NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSC 214
Query: 167 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPN 226
E Y+++K + +PW KI + L+ ++L +P+
Sbjct: 215 QE-------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPS 250
Query: 227 LRST 230
R T
Sbjct: 251 ARIT 254
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 35/184 (19%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 111
MP + +F+Q+ + Y+H IG+ HRDIKP+NLL++ + LK+ DFG A V
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN- 157
Query: 112 PNISYICSRY-----YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQL 166
N + ++ Y APEL+ + +D+WS G VL +L G+ P + D
Sbjct: 158 -NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSC 214
Query: 167 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPN 226
E Y+++K + +PW KI + L+ ++L +P+
Sbjct: 215 QE-------------------YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPS 250
Query: 227 LRST 230
R T
Sbjct: 251 ARIT 254
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 83/196 (42%), Gaps = 26/196 (13%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 121
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 170 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 228
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
Y APE + G +Y + D WS G + LL G P F G + G TR
Sbjct: 229 YVAPE-VLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHG------LAISPGXKTR--- 278
Query: 182 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFD 241
+ EF P+ W ++ + E L+ LL+ P R T E HP+
Sbjct: 279 --IRXGQYEFPNPE-----WSEVSE-----EVKXLIRNLLKTEPTQRXTITEFXNHPWIX 326
Query: 242 E-LRDPNTRLPNGRFL 256
+ + P T L R L
Sbjct: 327 QSTKVPQTPLHTSRVL 342
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 14/155 (9%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKL 59
R L HPN+V K + T +L +V+EY E R+ + R +
Sbjct: 70 RSLRHPNIVRFKEVILTPT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARF 119
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPH-THQLKLCDFGSAKVLVKGEPNISYIC 118
+F Q+ ++Y H + VCHRD+K +N L++ +LK+C FG +K V +
Sbjct: 120 FFQQLISGVSYCH-AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVG 178
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLG 153
+ Y APE++ D+WS G L +L+G
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 45 HYKMSQRMPLIYVKLYFY--QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG 102
HY +SQ + FY +I L ++HN V +RD+KP N+L++ H H +++ D G
Sbjct: 280 HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGH-VRISDLG 337
Query: 103 SAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF----- 157
A K +P+ S + + Y APE++ Y ++ D +S GC+L +LL G F
Sbjct: 338 LACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
Query: 158 PGESGVDQLVEIIKV-----------------LGTPTREEIKCMNPNYTEFK-FPQIKAH 199
+ +D++ + V L + C+ E K P ++
Sbjct: 397 KDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456
Query: 200 PWHKIFQKRMPP 211
W +F ++ PP
Sbjct: 457 DWQMVFLQKYPP 468
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 45 HYKMSQRMPLIYVKLYFY--QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG 102
HY +SQ + FY +I L ++HN V +RD+KP N+L++ H H +++ D G
Sbjct: 279 HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGH-VRISDLG 336
Query: 103 SAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF----- 157
A K +P+ S + + Y APE++ Y ++ D +S GC+L +LL G F
Sbjct: 337 LACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 395
Query: 158 PGESGVDQLVEIIKV-----------------LGTPTREEIKCMNPNYTEFK-FPQIKAH 199
+ +D++ + V L + C+ E K P ++
Sbjct: 396 KDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 455
Query: 200 PWHKIFQKRMPP 211
W +F ++ PP
Sbjct: 456 DWQMVFLQKYPP 467
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 45 HYKMSQRMPLIYVKLYFY--QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG 102
HY +SQ + FY +I L ++HN V +RD+KP N+L++ H H +++ D G
Sbjct: 280 HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGH-VRISDLG 337
Query: 103 SAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF----- 157
A K +P+ S + + Y APE++ Y ++ D +S GC+L +LL G F
Sbjct: 338 LACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
Query: 158 PGESGVDQLVEIIKV-----------------LGTPTREEIKCMNPNYTEFK-FPQIKAH 199
+ +D++ + V L + C+ E K P ++
Sbjct: 397 KDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456
Query: 200 PWHKIFQKRMPP 211
W +F ++ PP
Sbjct: 457 DWQMVFLQKYPP 468
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 45 HYKMSQRMPLIYVKLYFY--QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG 102
HY +SQ + FY +I L ++HN V +RD+KP N+L++ H H +++ D G
Sbjct: 280 HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGH-VRISDLG 337
Query: 103 SAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF----- 157
A K +P+ S + + Y APE++ Y ++ D +S GC+L +LL G F
Sbjct: 338 LACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
Query: 158 PGESGVDQLVEIIKV-----------------LGTPTREEIKCMNPNYTEFK-FPQIKAH 199
+ +D++ + V L + C+ E K P ++
Sbjct: 397 KDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456
Query: 200 PWHKIFQKRMPP 211
W +F ++ PP
Sbjct: 457 DWQMVFLQKYPP 468
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EY P
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE--- 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NL+++ + +++ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ ++ P +V L+ F KD L +V+EY P + H + R + + Y
Sbjct: 95 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGGE---MFSHLRRIGRFSEPHARFY 146
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
QI Y+H ++ + +RD+KP+NL+++ + +++ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IQVTDFGLAK-RVKGR--TWXLCGT 201
Query: 121 -YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 39/242 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ LDHPNVV L E D LY+ V E V + + +S+ + Y
Sbjct: 90 LKKLDHPNVVKLVEVLDDPNE-DHLYM--VFELVNQGPVMEVPTLKPLSEDQ----ARFY 142
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS-YICS 119
F + + + Y+H + HRDIKP NLLV H +K+ DFG + + +S + +
Sbjct: 143 FQDLIKGIEYLHYQ-KIIHRDIKPSNLLVGEDGH-IKIADFGVSNEFKGSDALLSNTVGT 200
Query: 120 RYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 177
+ APE + + + A+D+W+ G L + GQ F
Sbjct: 201 PAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF-------------------M 241
Query: 178 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIH 237
E I C++ +IK+ Q + + DL++R+L +P R E +H
Sbjct: 242 DERIMCLHS--------KIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293
Query: 238 PF 239
P+
Sbjct: 294 PW 295
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 14/155 (9%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKL 59
R L HPN+V K + T +L +V+EY E R+ + R +
Sbjct: 70 RSLRHPNIVRFKEVILTPT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARF 119
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPH-THQLKLCDFGSAKVLVKGEPNISYIC 118
+F Q+ ++Y H + V HRD+K +N L++ +LK+ DFG +K V S +
Sbjct: 120 FFQQLISGVSYAH-AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVG 178
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLG 153
+ Y APE++ D+WS G L +L+G
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYV--PETVHRVIKHHYKMSQRMPLIYVK 58
++ + HP +V L H F T +K L VL+Y+ E + + + + R +
Sbjct: 93 LKNVKHPFLVGL-HFSFQTADK----LYFVLDYINGGELFYHLQRERCFLEPR-----AR 142
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
Y +I AL Y+H ++ + +RD+KP+N+L++ H + L DFG K ++ S C
Sbjct: 143 FYAAEIASALGYLH-SLNIVYRDLKPENILLDSQGH-IVLTDFGLCKENIEHNSTTSTFC 200
Query: 119 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
Y APE++ Y +D W G VL E+L G P F
Sbjct: 201 GTPEYLAPEVLH-KQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGE 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 27/176 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 92 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGE 148
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 149 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 206
Query: 102 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG + + Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 207 GFAK-RVKG-ATWTLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 159 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 216
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 217 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 276
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 277 ECQHLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 8/180 (4%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 117 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 174
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 234
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALE 233
+ I+ C+ ++ F +I+ HPW + +P E ++ L P+ ++ ALE
Sbjct: 235 ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ--DVLLPQETAEIHLHSLSPGPS-KAAALE 291
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGE 128
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 129 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 186
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 187 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 112 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 169
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS 229
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 230 ECQHLIRWCLALRPSDRPTFEEIQNHPW 257
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGE 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 145 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 202
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS 262
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 263 ECQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGE 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 144 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 201
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS 261
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 262 ECQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGE 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGE 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 144 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 201
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS 261
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 262 ECQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI 64
+HP + L C F T ++ L V+E+V + H + S+R + Y +I
Sbjct: 82 NHPFLTQL-FCCFQTPDR----LFFVMEFVNGGD---LMFHIQKSRRFDEARARFYAAEI 133
Query: 65 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK-VLVKGEPNISYICSRYYR 123
AL ++H+ G+ +RD+K N+L++ H KL DFG K + G ++ + Y
Sbjct: 134 ISALMFLHDK-GIIYRDLKLDNVLLD-HEGHCKLADFGMCKEGICNGVTTATFCGTPDYI 191
Query: 124 APELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
APE I Y A+D W+ G +L E+L G F E+ D L E I
Sbjct: 192 APE-ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN-EDDLFEAI 236
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 145 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 202
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS 262
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 263 ECQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 115 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 172
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 173 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 232
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 233 ECQHLIRWCLALRPSDRPTFEEIQNHPW 260
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGE 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFAEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ ++ P +V L+ F KD L +V+EYV + H + R + + Y
Sbjct: 82 LQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFY 133
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 134 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDEQGY-IQVTDFGFAK-RVKGR--TWXLCGT 188
Query: 121 -YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 189 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE--- 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 116 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 173
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 233
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 234 ECQHLIRWCLALRPSDRPTFEEIQNHPW 261
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 112 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 169
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 229
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 230 ECQHLIRWCLALRPSDRPTFEEIQNHPW 257
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 144 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 201
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 261
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 262 ECQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 116 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 173
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 233
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 234 ECQHLIRWCLALRPSDRPTFEEIQNHPW 261
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 117 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 174
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 234
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 235 ECQHLIRWCLALRPSDRPTFEEIQNHPW 262
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 14/170 (8%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYF 61
+ HPN+V + F E LY+ V++Y + R+ + Q ++ +F
Sbjct: 80 MKHPNIVQYRESF---EENGSLYI--VMDYCEGGDLFKRINAQKGVLFQEDQILD---WF 131
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-EPNISYICSR 120
QIC AL ++H+ + HRDIK QN+ + ++L DFG A+VL E + I +
Sbjct: 132 VQICLALKHVHDR-KILHRDIKSQNIFLTKDG-TVQLGDFGIARVLNSTVELARACIGTP 189
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
YY +PE I Y DIW+ GCVL EL + F S + +++II
Sbjct: 190 YYLSPE-ICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 92 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE--- 148
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 149 MFSHLRRIGRFXEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 206
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 207 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGE 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG + Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR-TWXLAGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 66 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE--- 122
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 123 MFSHLRRIGRFXEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 180
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 181 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGE 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFXEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 159 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 216
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 217 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 276
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 277 ECQHLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 117 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 174
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 234
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 235 ECQHLIRWCLALRPSDRPTFEEIQNHPW 262
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGE 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG + Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR-TWXLXGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGE 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFXEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 112 ARSFFWQVLEAVRHCHNX-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 169
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
+R Y PE I + + +WS G +L +++ G
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 207
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 151 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 208
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 209 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 268
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 269 ECQHLIRWCLALRPSDRPTFEEIQNHPW 296
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 131 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 188
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 189 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 248
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 249 ECQHLIRWCLALRPSDRPTFEEIQNHPW 276
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 132 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 189
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + + +
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 249
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 250 ECQHLIRWCLALRPSDRPTFEEIQNHPW 277
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGE 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFXEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 22/171 (12%)
Query: 3 LLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPET-VHRVIKHHYKMSQRMPLIYVKLYF 61
+L HPN+++L+ E L LV+E+ ++RV+ +R+P + +
Sbjct: 62 MLKHPNIIALRGVCLK-----EPNLCLVMEFARGGPLNRVLS-----GKRIPPDILVNWA 111
Query: 62 YQICRALAYIHN--TIGVCHRDIKPQNLLV-------NPHTHQLKLCDFGSAKVLVKGEP 112
QI R + Y+H+ + + HRD+K N+L+ + LK+ DFG A+ +
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR-TT 170
Query: 113 NISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 163
+S + + APE+I A+ ++ D+WS G +L ELL G+ F G G+
Sbjct: 171 KMSAAGAYAWMAPEVIR-ASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL 220
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y +Q+ R + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +
Sbjct: 204 YSFQVARGMEFLSSRKCI-HRDLAARNILLS-ENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 175
R + APE IF Y+ D+WS G +L E+ LG +PG V++ + +
Sbjct: 262 RLPLKWMAPESIFDKI-YSTKSDVWSYGVLLWEIFSLGGSPYPG-------VQMDEDFCS 313
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
RE ++ P Y+ + QI WH+ ++R P +LV +L
Sbjct: 314 RLREGMRMRAPEYSTPEIYQIMLDCWHRDPKER--PRFAELVEKL 356
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 139 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 196
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
+R Y PE I + + +WS G +L +++ G
Sbjct: 197 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 234
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR 123
I +AL Y+ GV HRD+KP N+L++ Q+KLCDFG + LV + Y
Sbjct: 133 IVKALYYLKEKHGVIHRDVKPSNILLDERG-QIKLCDFGISGRLVDDKAKDRSAGCAAYM 191
Query: 124 APELIF----GATEYTAAIDIWSAGCVLAELLLGQPLFP 158
APE I +Y D+WS G L EL GQ FP
Sbjct: 192 APERIDPPDPTKPDYDIRADVWSLGISLVELATGQ--FP 228
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 144 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 201
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + +
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSX 261
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 262 ECQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 145 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 202
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + +
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSX 262
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 263 ECQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 109/257 (42%), Gaps = 53/257 (20%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYF 61
L HPN++ L + F+ D + L+LEY P E + K QR I
Sbjct: 80 LHHPNILRLYNYFY-----DRRRIYLILEYAPRGELYKELQKSCTFDEQRTATI-----M 129
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 121
++ AL Y H V HRDIKP+NLL+ +LK+ DFG + V + +
Sbjct: 130 EELADALMYCHGK-KVIHRDIKPENLLLG-LKGELKIADFGWS-VHAPSLRRKTMCGTLD 186
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
Y PE+I G + +D+W G + ELL+G P F S + I+KV
Sbjct: 187 YLPPEMIEGRM-HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV--------- 236
Query: 182 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFD 241
+ KFP +P A DL+S+LL+++P+ R + HP+
Sbjct: 237 --------DLKFPA------------SVPTGAQDLISKLLRHNPSERLPLAQVSAHPW-- 274
Query: 242 ELRDPNTRLPNGRFLPP 258
R + R LPP
Sbjct: 275 ------VRANSRRVLPP 285
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGE 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NL+++ + +++ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLIIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIII-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 145 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 202
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT 175
+R Y PE I + + +WS G +L +++ G P E + V + +
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSX 262
Query: 176 PTREEIK-CMNPNYTEF-KFPQIKAHPW 201
+ I+ C+ ++ F +I+ HPW
Sbjct: 263 ECQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 159 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 216
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
+R Y PE I + + +WS G +L +++ G
Sbjct: 217 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 254
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 164 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 221
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
+R Y PE I + + +WS G +L +++ G
Sbjct: 222 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 259
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 131 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 188
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
+R Y PE I + + +WS G +L +++ G
Sbjct: 189 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 226
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 132 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 189
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
+R Y PE I + + +WS G +L +++ G
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 227
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 116
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K +
Sbjct: 132 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 189
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
+R Y PE I + + +WS G +L +++ G
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 227
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGE 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y APE+I + Y A+D W+ G ++ ++ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 100/241 (41%), Gaps = 39/241 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYV-PETVHRVIKHHYKMSQRMPLIYVKL 59
M+ D P+VV +F T+ L +V+EY +V +I+ K + +
Sbjct: 78 MQQCDSPHVVKYYGSYFKNTD-----LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATI-- 130
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
+ L Y+H + HRDIK N+L+N H KL DFG A L + +
Sbjct: 131 -LQSTLKGLEYLHFMRKI-HRDIKAGNILLNTEGH-AKLADFGVAGQLTDXMAKRNXVIG 187
Query: 120 R-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
++ APE+I Y DIWS G E+ G+P + + + + PT
Sbjct: 188 TPFWMAPEVI-QEIGYNCVADIWSLGITAIEMAEGKPPYA------DIHPMRAIFMIPT- 239
Query: 179 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHP 238
NP T F+ P++ W F D V + L SP R+TA + L HP
Sbjct: 240 ------NPPPT-FRKPEL----WSDNF--------TDFVKQCLVKSPEQRATATQLLQHP 280
Query: 239 F 239
F
Sbjct: 281 F 281
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 85/188 (45%), Gaps = 35/188 (18%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNI--- 114
Y QI AL Y H+ + HRD+KP+N+L+ + +KL DFG A L GE +
Sbjct: 135 YMRQILEALRYCHDN-NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAG 191
Query: 115 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
+ + ++ APE++ Y +D+W G +L LL G F G ++L E I
Sbjct: 192 GRVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI---- 244
Query: 175 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
+ + K MNP W I + A DLV R+L P R T EA
Sbjct: 245 --IKGKYK-MNP------------RQWSHISES-----AKDLVRRMLMLDPAERITVYEA 284
Query: 235 LIHPFFDE 242
L HP+ E
Sbjct: 285 LNHPWLKE 292
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 99/239 (41%), Gaps = 43/239 (17%)
Query: 22 KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRD 81
+DE YL LV+EY ++ K +R+P + Y +I A+ +H +G HRD
Sbjct: 131 QDENYLYLVMEYY--VGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR-LGYVHRD 187
Query: 82 IKPQNLLVNPHTHQLKLCDFGSA-KVLVKGE-PNISYICSRYYRAPELIFGATEYTAAI- 138
IKP N+L++ H ++L DFGS K+ G ++ + + Y +PE++
Sbjct: 188 IKPDNILLDRCGH-IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGS 246
Query: 139 -----DIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 193
D W+ G E+ GQ F +S + +I+
Sbjct: 247 YGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV----------------------- 283
Query: 194 PQIKAHPWHKIFQKRMPPEAVDLVSRLL--QYSPNLRSTALEALIHPFF-----DELRD 245
K H + + +P EA D + RLL + R A + HPFF D LRD
Sbjct: 284 -HYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWDGLRD 341
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 102/241 (42%), Gaps = 39/241 (16%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVKLY 60
R L HPN+V L S E+ YL L E ++ + Y + I
Sbjct: 60 RKLQHPNIVRLHD---SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---- 112
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPNISYIC 118
QI ++AY H+ G+ HR++KP+NLL+ +KL DFG A + E +
Sbjct: 113 --QILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG 169
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+ Y +PE + Y+ +DIW+ G +L LL+G P F E +L IK
Sbjct: 170 TPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKA------ 221
Query: 179 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHP 238
+ +P + W + PEA L+ +L +P R TA +AL P
Sbjct: 222 ----------GAYDYP---SPEWDTV-----TPEAKSLIDSMLTVNPKKRITADQALKVP 263
Query: 239 F 239
+
Sbjct: 264 W 264
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 102/242 (42%), Gaps = 39/242 (16%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVKLY 60
R L HPN+V L S E+ YL L E ++ + Y + I
Sbjct: 59 RKLQHPNIVRLHD---SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---- 111
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPNISYIC 118
QI ++AY H+ G+ HR++KP+NLL+ +KL DFG A + E +
Sbjct: 112 --QILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG 168
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+ Y +PE + Y+ +DIW+ G +L LL+G P F E +L IK
Sbjct: 169 TPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKA------ 220
Query: 179 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHP 238
+ +P + W + PEA L+ +L +P R TA +AL P
Sbjct: 221 ----------GAYDYP---SPEWDTV-----TPEAKSLIDSMLTVNPKKRITADQALKVP 262
Query: 239 FF 240
+
Sbjct: 263 WI 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 102/242 (42%), Gaps = 39/242 (16%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVKLY 60
R L HPN+V L S E+ YL L E ++ + Y + I
Sbjct: 60 RKLQHPNIVRLHD---SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---- 112
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPNISYIC 118
QI ++AY H+ G+ HR++KP+NLL+ +KL DFG A + E +
Sbjct: 113 --QILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG 169
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 178
+ Y +PE + Y+ +DIW+ G +L LL+G P F E +L IK
Sbjct: 170 TPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKA------ 221
Query: 179 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHP 238
+ +P + W + PEA L+ +L +P R TA +AL P
Sbjct: 222 ----------GAYDYP---SPEWDTV-----TPEAKSLIDSMLTVNPKKRITADQALKVP 263
Query: 239 FF 240
+
Sbjct: 264 WI 265
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 115/249 (46%), Gaps = 46/249 (18%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPET-VHRVIKHHYK-MSQRMPLIYVKLYF 61
L HP+++ L + F +D Y+ LVLE ++R +K+ K S+ + +
Sbjct: 68 LKHPSILELYNYF-----EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN----EARHFM 118
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL-VKGEPNISYICSR 120
+QI + Y+H+ G+ HRD+ NLL+ + +K+ DFG A L + E + + +
Sbjct: 119 HQIITGMLYLHSH-GILHRDLTLSNLLLTRNM-NIKIADFGLATQLKMPHEKHYTLCGTP 176
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 180
Y +PE I + + D+WS GC+ LL+G+P F ++ + L +++
Sbjct: 177 NYISPE-IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV---------- 225
Query: 181 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
+++ P + EA DL+ +LL+ +P R + L HPF
Sbjct: 226 -------LADYEMPSF------------LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
Query: 241 DELRDPNTR 249
R+ +T+
Sbjct: 267 S--RNSSTK 273
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 33/170 (19%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIK---HHYKMSQRMPLIY 56
MR L+HPNV+ F KD+ LN + EY+ T+ +IK Y SQR+
Sbjct: 61 MRCLEHPNVLK----FIGVLYKDK-RLNFITEYIKGGTLRGIIKSMDSQYPWSQRVS--- 112
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEPN- 113
+ I +AY+H ++ + HRD+ N LV + + + + DFG A+++V K +P
Sbjct: 113 ---FAKDIASGMAYLH-SMNIIHRDLNSHNCLVRENKNVV-VADFGLARLMVDEKTQPEG 167
Query: 114 ------------ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + + Y+ APE+I G + Y +D++S G VL E++
Sbjct: 168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRS-YDEKVDVFSFGIVLCEII 216
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 103/244 (42%), Gaps = 43/244 (17%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVKLY 60
R L HPN+V L S E+ YL L E ++ + Y + I
Sbjct: 83 RKLQHPNIVRLHD---SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---- 135
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPNISYIC 118
QI ++AY H+ G+ HR++KP+NLL+ +KL DFG A + E +
Sbjct: 136 --QILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG 192
Query: 119 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQ--LVEIIKVLGTP 176
+ Y +PE + Y+ +DIW+ G +L LL+G P F E DQ L IK
Sbjct: 193 TPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDE---DQHRLYAQIKA---- 244
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+ +P + W + PEA L+ +L +P R TA +AL
Sbjct: 245 ------------GAYDYP---SPEWDTV-----TPEAKSLIDSMLTVNPKKRITADQALK 284
Query: 237 HPFF 240
P+
Sbjct: 285 VPWI 288
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE--- 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C Y AP +I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEYLAPAIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 23/134 (17%)
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK-------VLVKGEPN 113
F QI AL+YIH+ G+ HRD+KP N+ ++ + +K+ DFG AK +L N
Sbjct: 122 FRQILEALSYIHSQ-GIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 114 I--------SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQ 165
+ S I + Y A E++ G Y ID++S G + E+ ++P +G+++
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER 234
Query: 166 LVEIIKVLGTPTRE 179
V I+K L + + E
Sbjct: 235 -VNILKKLRSVSIE 247
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI--YVKL 59
+L HPN+V E+ + L ++++ KM R PL V
Sbjct: 81 KLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLK 140
Query: 60 YFYQICRALAYIHNTIG-VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
FYQ CRA+ ++H + HRD+K +NLL++ + +KLCDFGSA + P+ S+
Sbjct: 141 IFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS-NQGTIKLCDFGSATT-ISHYPDYSWSA 198
Query: 119 SR--------------YYRAPELIFGATEY--TAAIDIWSAGCVL 147
R YR PE+I + + DIW+ GC+L
Sbjct: 199 QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 23/134 (17%)
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK-------VLVKGEPN 113
F QI AL+YIH+ G+ HRD+KP N+ ++ + +K+ DFG AK +L N
Sbjct: 122 FRQILEALSYIHSQ-GIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 114 I--------SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQ 165
+ S I + Y A E++ G Y ID++S G + E+ ++P +G+++
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER 234
Query: 166 LVEIIKVLGTPTRE 179
V I+K L + + E
Sbjct: 235 -VNILKKLRSVSIE 247
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 29/177 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEK-------------------DELYLNLVLEYVPETVHRV 41
M++LD VV LK + EK D L +V+EYV
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGE 127
Query: 42 IKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDF 101
+ H + R + + Y QI Y+H ++ + +RD+KP+NLL++ + +++ DF
Sbjct: 128 MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDF 185
Query: 102 GSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
G AK VKG +C APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 186 GFAK-RVKGR--TWXLCGTPEALAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 29/197 (14%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYIC-SR 120
I A+ ++H+ + HRD+KP+NLL LKL DFG AK + + C +
Sbjct: 137 IGTAIQFLHSH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTP 193
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 180
YY APE + G +Y + D+WS G ++ LL G P F +G + + +
Sbjct: 194 YYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAISPGMKRR 244
Query: 181 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
I+ ++ FP + W ++ + +A L+ LL+ P R T + + HP+
Sbjct: 245 IR-----LGQYGFPNPE---WSEVSE-----DAKQLIRLLLKTDPTERLTITQFMNHPWI 291
Query: 241 DE-LRDPNTRLPNGRFL 256
++ + P T L R L
Sbjct: 292 NQSMVVPQTPLHTARVL 308
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 40/261 (15%)
Query: 22 KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRD 81
+DE +L LV++Y ++ K ++P + Y ++ A+ IH + HRD
Sbjct: 144 QDENHLYLVMDYY--VGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ-LHYVHRD 200
Query: 82 IKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNISY-ICSRYYRAPELI----FGATEYT 135
IKP N+L++ + H ++L DFGS K+ G S + + Y +PE++ G +Y
Sbjct: 201 IKPDNVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYG 259
Query: 136 AAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE-FKFP 194
D WS G + E+L G+ F ES V+ +I+ N+ E F+FP
Sbjct: 260 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM----------------NHEERFQFP 303
Query: 195 QIKAHPWHKIFQKRMPPEAVDLVSRLL-QYSPNLRSTALEAL-IHPFFDELRDPNTRLPN 252
+H + EA DL+ RL+ L +E H FF+ L N R
Sbjct: 304 ---SHV------TDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLE 354
Query: 253 GRFLPPLFNFKPHELKGVPVD 273
++P + + P + VD
Sbjct: 355 APYIPDVSS--PSDTSNFDVD 373
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 29/197 (14%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYIC-SR 120
I A+ ++H+ + HRD+KP+NLL LKL DFG AK + + C +
Sbjct: 118 IGTAIQFLHSH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTP 174
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 180
YY APE + G +Y + D+WS G ++ LL G P F +G + + +
Sbjct: 175 YYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAISPGMKRR 225
Query: 181 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFF 240
I+ ++ FP + W ++ + +A L+ LL+ P R T + + HP+
Sbjct: 226 IR-----LGQYGFPNPE---WSEVSE-----DAKQLIRLLLKTDPTERLTITQFMNHPWI 272
Query: 241 DE-LRDPNTRLPNGRFL 256
++ + P T L R L
Sbjct: 273 NQSMVVPQTPLHTARVL 289
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 115/260 (44%), Gaps = 38/260 (14%)
Query: 22 KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRD 81
+DE +L LV++Y ++ K ++P + Y ++ A+ IH + HRD
Sbjct: 160 QDENHLYLVMDYY--VGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ-LHYVHRD 216
Query: 82 IKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNISY-ICSRYYRAPELI----FGATEYT 135
IKP N+L++ + H ++L DFGS K+ G S + + Y +PE++ G +Y
Sbjct: 217 IKPDNVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYG 275
Query: 136 AAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 195
D WS G + E+L G+ F ES +++ G K MN + F+FP
Sbjct: 276 PECDWWSLGVCMYEMLYGETPFYAES-------LVETYG-------KIMN-HEERFQFP- 319
Query: 196 IKAHPWHKIFQKRMPPEAVDLVSRLL-QYSPNLRSTALEAL-IHPFFDELRDPNTRLPNG 253
+H + EA DL+ RL+ L +E H FF+ L N R
Sbjct: 320 --SHV------TDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEA 371
Query: 254 RFLPPLFNFKPHELKGVPVD 273
++P + + P + VD
Sbjct: 372 PYIPDVSS--PSDTSNFDVD 389
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 27 LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQN 86
L LV+EY+P R ++ R+ + LY QIC+ + Y+ + V HRD+ +N
Sbjct: 85 LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSRRCV-HRDLAARN 141
Query: 87 LLVNPHTHQLKLCDFGSAKVL-------VKGEPNISYICSRYYRAPELIFGATEYTAAID 139
+LV H +K+ DFG AK+L V EP S I ++ APE + ++ D
Sbjct: 142 ILVESEAH-VKIADFGLAKLLPLDKDXXVVREPGQSPI---FWYAPESL-SDNIFSRQSD 196
Query: 140 IWSAGCVLAELL 151
+WS G VL EL
Sbjct: 197 VWSFGVVLYELF 208
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 108/268 (40%), Gaps = 75/268 (27%)
Query: 41 VIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQN-------------- 86
+IK +Y Q +P+ VK Q+ + L Y+H+ + H DIKP+N
Sbjct: 129 IIKSNY---QGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMA 185
Query: 87 --------------------------LLVNP------HTHQLKLCDFGSAKVLVKGEPNI 114
LLVNP ++K+ D G+A + K
Sbjct: 186 AEATEWQKAGAPPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHK--HFT 243
Query: 115 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESG------VDQLVE 168
I +R YR+ E++ GA Y+ DIWS C+ EL G LF SG D +
Sbjct: 244 EDIQTRQYRSIEVLIGAG-YSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAH 302
Query: 169 IIKVLGTPTREEIKCMNPNYTEFKFPQ-------IKAHPW---HKIFQKRMPP-----EA 213
II++LG+ R ++ Y+ F + K PW + +K P +
Sbjct: 303 IIELLGSIPRH--FALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQF 360
Query: 214 VDLVSRLLQYSPNLRSTALEALIHPFFD 241
D + +L+ P R++A E L HP+ +
Sbjct: 361 TDFLIPMLEMVPEKRASAGECLRHPWLN 388
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
+R L HPN+V + ++ L +V+EY + VI K Q + +V
Sbjct: 59 LRELKHPNIVRY---YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR 115
Query: 60 YFYQICRALAYIHNTIG----VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEP-NI 114
Q+ AL H V HRD+KP N+ ++ +KL DFG A++L E
Sbjct: 116 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDEDFAK 174
Query: 115 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
++ + YY +PE + Y DIWS GC+L EL P F S
Sbjct: 175 EFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 27 LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQN 86
L LV+EY+P R ++ R+ + LY QIC+ + Y+ + V HRD+ +N
Sbjct: 88 LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSRRCV-HRDLAARN 144
Query: 87 LLVNPHTHQLKLCDFGSAKVL-------VKGEPNISYICSRYYRAPELIFGATEYTAAID 139
+LV H +K+ DFG AK+L V EP S I ++ APE + ++ D
Sbjct: 145 ILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPESL-SDNIFSRQSD 199
Query: 140 IWSAGCVLAELL 151
+WS G VL EL
Sbjct: 200 VWSFGVVLYELF 211
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 38/236 (16%)
Query: 47 KMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA-K 105
K R+P + Y ++ A+ +H + HRDIKP N+L++ + H ++L DFGS K
Sbjct: 167 KFEDRLPEEMARFYLAEMVIAIDSVHQ-LHYVHRDIKPDNILMDMNGH-IRLADFGSCLK 224
Query: 106 VLVKGEPNISY-ICSRYYRAPELI----FGATEYTAAIDIWSAGCVLAELLLGQPLFPGE 160
++ G S + + Y +PE++ G Y D WS G + E+L G+ F E
Sbjct: 225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284
Query: 161 SGVDQLVEIIKVLGTPTREEIKCMNPNYTE-FKFPQIKAHPWHKIFQKRMPPEAVDLVSR 219
S V+ +I+ N+ E F+FP + A DL+ R
Sbjct: 285 SLVETYGKIM----------------NHKERFQFPTQVTD---------VSENAKDLIRR 319
Query: 220 LL-QYSPNLRSTALEAL-IHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPVD 273
L+ L +E HPFF + N R ++P + + P + VD
Sbjct: 320 LICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSS--PTDTSNFDVD 373
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 27 LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQN 86
L LV+EY+P R ++ R+ + LY QIC+ + Y+ + V HRD+ +N
Sbjct: 89 LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSRRCV-HRDLAARN 145
Query: 87 LLVNPHTHQLKLCDFGSAKVL-------VKGEPNISYICSRYYRAPELIFGATEYTAAID 139
+LV H +K+ DFG AK+L V EP S I ++ APE + ++ D
Sbjct: 146 ILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPESL-SDNIFSRQSD 200
Query: 140 IWSAGCVLAELL 151
+WS G VL EL
Sbjct: 201 VWSFGVVLYELF 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 27 LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQN 86
L LV+EY+P R ++ R+ + LY QIC+ + Y+ + V HRD+ +N
Sbjct: 101 LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSRRCV-HRDLAARN 157
Query: 87 LLVNPHTHQLKLCDFGSAKVL-------VKGEPNISYICSRYYRAPELIFGATEYTAAID 139
+LV H +K+ DFG AK+L V EP S I ++ APE + ++ D
Sbjct: 158 ILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPESL-SDNIFSRQSD 212
Query: 140 IWSAGCVLAELL 151
+WS G VL EL
Sbjct: 213 VWSFGVVLYELF 224
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 16/171 (9%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 65
HP++V + + T + +V+EYV + K Q++P+ Y +I
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK-----GQKLPVAEAIAYLLEIL 192
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI-CSRYYRA 124
AL+Y+H +IG+ + D+KP+N+++ QLKL D G+ + + Y+ + ++A
Sbjct: 193 PALSYLH-SIGLVYNDLKPENIMLT--EEQLKLIDLGAVSRI----NSFGYLYGTPGFQA 245
Query: 125 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
PE++ T T A DI++ G LA L L P G VD L E VL T
Sbjct: 246 PEIV--RTGPTVATDIYTVGRTLAALTLDLPTRNGRY-VDGLPEDDPVLKT 293
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE-PNISYICSRY 121
+I + L Y+H+ + HRDIK N+L++ H ++KL DFG A L + +++ + +
Sbjct: 112 EILKGLDYLHSEKKI-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNTFVGTPF 169
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQP 155
+ APE+I + Y + DIWS G EL G+P
Sbjct: 170 WMAPEVI-KQSAYDSKADIWSLGITAIELARGEP 202
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE-PNISYICSRY 121
+I + L Y+H+ + HRDIK N+L++ H ++KL DFG A L + +++ + +
Sbjct: 132 EILKGLDYLHSEKKI-HRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQIKRNTFVGTPF 189
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQP 155
+ APE+I + Y + DIWS G EL G+P
Sbjct: 190 WMAPEVI-KQSAYDSKADIWSLGITAIELARGEP 222
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 13/165 (7%)
Query: 7 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 66
P + L CF + D LY V+EYV + +H + R + Y +I
Sbjct: 81 PFLTQLHSCFQTM---DRLYF--VMEYVNGGD---LMYHIQQVGRFKEPHAVFYAAEIAI 132
Query: 67 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAP 125
L ++ + G+ +RD+K N++++ H +K+ DFG K + C Y AP
Sbjct: 133 GLFFLQSK-GIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAP 190
Query: 126 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
E+I Y ++D W+ G +L E+L GQ F GE D+L + I
Sbjct: 191 EII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-EDELFQSI 233
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 103/270 (38%), Gaps = 77/270 (28%)
Query: 41 VIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLV----------- 89
+IK +Y Q +PL VK Q+ + L Y+H + H DIKP+N+L+
Sbjct: 135 IIKSNY---QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLA 191
Query: 90 -------------------------------------NPHTHQLKLCDFGSAKVLVKGEP 112
N ++K+ D G+A + K
Sbjct: 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK--H 249
Query: 113 NISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV------DQL 166
I +R YR+ E++ G+ Y DIWS C+ EL G LF SG D +
Sbjct: 250 FTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHI 308
Query: 167 VEIIKVLGTPTREEIKCMNPNYTEFKFPQ-------IKAHPWHKI--------FQKRMPP 211
II++LG R+ I + Y++ F + K PW + +
Sbjct: 309 ALIIELLGKVPRKLI--VAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAA 366
Query: 212 EAVDLVSRLLQYSPNLRSTALEALIHPFFD 241
D + +L+ P R+TA E L HP+ +
Sbjct: 367 GFTDFLLPMLELIPEKRATAAECLRHPWLN 396
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 103/270 (38%), Gaps = 77/270 (28%)
Query: 41 VIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLV----------- 89
+IK +Y Q +PL VK Q+ + L Y+H + H DIKP+N+L+
Sbjct: 119 IIKSNY---QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLA 175
Query: 90 -------------------------------------NPHTHQLKLCDFGSAKVLVKGEP 112
N ++K+ D G+A + K
Sbjct: 176 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK--H 233
Query: 113 NISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV------DQL 166
I +R YR+ E++ G+ Y DIWS C+ EL G LF SG D +
Sbjct: 234 FTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHI 292
Query: 167 VEIIKVLGTPTREEIKCMNPNYTEFKFPQ-------IKAHPWHKI--------FQKRMPP 211
II++LG R+ I + Y++ F + K PW + +
Sbjct: 293 ALIIELLGKVPRKLI--VAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAA 350
Query: 212 EAVDLVSRLLQYSPNLRSTALEALIHPFFD 241
D + +L+ P R+TA E L HP+ +
Sbjct: 351 GFTDFLLPMLELIPEKRATAAECLRHPWLN 380
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY--VKLYFYQ 63
HP V+ L F E E ++ LVLE P + + ++++ PL + +F Q
Sbjct: 97 HPGVIRLLDWF----ETQEGFM-LVLER-PLPAQDLFDY---ITEKGPLGEGPSRCFFGQ 147
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR 123
+ A+ + H+ GV HRDIK +N+L++ KL DFGS L+ EP + +R Y
Sbjct: 148 VVAAIQHCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSG-ALLHDEPYTDFDGTRVYS 205
Query: 124 APELIFGATEYTAAIDIWSAGCVLAELLLGQ 154
PE I + +WS G +L +++ G
Sbjct: 206 PPEWISRHQYHALPATVWSLGILLYDMVCGD 236
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 40/253 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
+R + HPN+++L F + T+ + L+LE V + + +++ ++K
Sbjct: 62 LREIRHPNIITLHDIFENKTD-----VVLILELVSGGELFDFLAEKESLTEDEATQFLK- 115
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H+ + H D+KP+N+++ N ++KL DFG A + G +
Sbjct: 116 ---QILDGVHYLHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI 171
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F GE+ + L I
Sbjct: 172 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI------- 223
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+N ++ E F A D + RLL P R T ++L
Sbjct: 224 -----SAVNYDFDEEYFSN-------------TSELAKDFIRRLLVKDPKRRMTIAQSLE 265
Query: 237 HPFFDELRDPNTR 249
H + +R N R
Sbjct: 266 HSWIKAIRRRNVR 278
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 111
+ L ++ Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXI-HRDLAARNILLS-EKNVVKICDFGLARDIXKDP 202
Query: 112 PNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLV 167
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 254
Query: 168 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 222
+I + +E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 16/157 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHR--VIKHHYKMSQRMPLIYVK 58
+R L H N+V K TE + L++E++P + + K+ K++ + L Y
Sbjct: 77 LRNLYHENIVKYKGI---CTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA- 132
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
QIC+ + Y+ + V HRD+ +N+LV HQ+K+ DFG K + + +
Sbjct: 133 ---VQICKGMDYLGSRQYV-HRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVKD 187
Query: 119 SR----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
R ++ APE + + Y A+ D+WS G L ELL
Sbjct: 188 DRDSPVFWYAPECLMQSKFYIAS-DVWSFGVTLHELL 223
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 13/165 (7%)
Query: 7 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 66
P + L CF + D LY V+EYV + +H + R + Y +I
Sbjct: 402 PFLTQLHSCFQTM---DRLYF--VMEYVNGGD---LMYHIQQVGRFKEPHAVFYAAEIAI 453
Query: 67 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAP 125
L ++ + G+ +RD+K N++++ H +K+ DFG K + C Y AP
Sbjct: 454 GLFFLQSK-GIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAP 511
Query: 126 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
E+I Y ++D W+ G +L E+L GQ F GE D+L + I
Sbjct: 512 EII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-EDELFQSI 554
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 16/157 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHR--VIKHHYKMSQRMPLIYVK 58
+R L H N+V K TE + L++E++P + + K+ K++ + L Y
Sbjct: 65 LRNLYHENIVKYKGI---CTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA- 120
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
QIC+ + Y+ + V HRD+ +N+LV HQ+K+ DFG K + + +
Sbjct: 121 ---VQICKGMDYLGSRQYV-HRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVKD 175
Query: 119 SR----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
R ++ APE + + Y A+ D+WS G L ELL
Sbjct: 176 DRDSPVFWYAPECLMQSKFYIAS-DVWSFGVTLHELL 211
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE-PNISYICSRY 121
+I + L Y+H+ + HRDIK N+L++ H ++KL DFG A L + ++ + +
Sbjct: 112 EILKGLDYLHSEKKI-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNXFVGTPF 169
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQP 155
+ APE+I + Y + DIWS G EL G+P
Sbjct: 170 WMAPEVI-KQSAYDSKADIWSLGITAIELARGEP 202
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE-PNISYICSRY 121
+I + L Y+H+ + HRDIK N+L++ H ++KL DFG A L + ++ + +
Sbjct: 127 EILKGLDYLHSEKKI-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNXFVGTPF 184
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQP 155
+ APE+I + Y + DIWS G EL G+P
Sbjct: 185 WMAPEVI-KQSAYDSKADIWSLGITAIELARGEP 217
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 44/246 (17%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI 64
+HPNV+ + TEKD + + +E T+ ++ K + L + L Q
Sbjct: 76 EHPNVIR-----YFCTEKDRQFQYIAIELCAATLQEYVEQ--KDFAHLGLEPITL-LQQT 127
Query: 65 CRALAYIHNTIGVCHRDIKPQNLLVN-PHTH---QLKLCDFGSAKVLVKGEPNISYIC-- 118
LA++H ++ + HRD+KP N+L++ P+ H + + DFG K L G + S
Sbjct: 128 TSGLAHLH-SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 119 --SRYYRAPELIFGATEY--TAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
+ + APE++ + T +DI+SAGCV ++ + P + + I+ LG
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFY-YVISEGSHPFGKSLQRQANIL--LG 243
Query: 175 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
+ + C++P +K A +L+ +++ P R +A
Sbjct: 244 ACS---LDCLHP-------------------EKHEDVIARELIEKMIAMDPQKRPSAKHV 281
Query: 235 LIHPFF 240
L HPFF
Sbjct: 282 LKHPFF 287
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
+R L HPN+V + ++ L +V+EY + VI K Q + +V
Sbjct: 59 LRELKHPNIVRY---YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR 115
Query: 60 YFYQICRALAYIHNTIG----VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEP-NI 114
Q+ AL H V HRD+KP N+ ++ +KL DFG A++L
Sbjct: 116 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAK 174
Query: 115 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
+++ + YY +PE + Y DIWS GC+L EL P F S
Sbjct: 175 TFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +
Sbjct: 153 YSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 175
R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 211 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 262
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 222
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 263 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 52 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 111
+ L ++ Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIXKDP 202
Query: 112 PNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLV 167
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 254
Query: 168 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 222
+I + +E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 20/158 (12%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+R L H +++ K C EK L LV+EYVP R Y + L + L+
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKS---LQLVMEYVPLGSLR----DYLPRHSIGLAQLLLF 122
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPN 113
QIC +AY+H+ + HR++ +N+L++ + +K+ DFG AK + +G E
Sbjct: 123 AQQICEGMAYLHSQHYI-HRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 114 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
S + ++ APE + Y A+ D+WS G L ELL
Sbjct: 181 DSPV---FWYAPECLKEYKFYYAS-DVWSFGVTLYELL 214
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
+R L HPN+V + ++ L +V+EY + VI K Q + +V
Sbjct: 59 LRELKHPNIVRY---YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR 115
Query: 60 YFYQICRALAYIHNTIG----VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEP-NI 114
Q+ AL H V HRD+KP N+ ++ +KL DFG A++L
Sbjct: 116 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAK 174
Query: 115 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 161
+++ + YY +PE + Y DIWS GC+L EL P F S
Sbjct: 175 AFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 74/167 (44%), Gaps = 18/167 (10%)
Query: 2 RLLDHPNVVSL-KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
RL +HPN++ L +C K E +L L + T+ I+ + +
Sbjct: 81 RLFNHPNILRLVAYCLRERGAKHEAWLLLPF-FKRGTLWNEIERLKDKGNFLTEDQILWL 139
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGS---AKVLVKG------- 110
ICR L IH G HRD+KP N+L+ Q L D GS A + V+G
Sbjct: 140 LLGICRGLEAIHAK-GYAHRDLKPTNILLGDEG-QPVLMDLGSMNQACIHVEGSRQALTL 197
Query: 111 EPNISYICSRYYRAPELIFGATEYTA---AIDIWSAGCVLAELLLGQ 154
+ + C+ YRAPEL F + D+WS GCVL ++ G+
Sbjct: 198 QDWAAQRCTISYRAPEL-FSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +
Sbjct: 144 YSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 175
R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 202 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 253
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 222
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 254 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +
Sbjct: 153 YSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 175
R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 211 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 262
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 222
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 263 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +
Sbjct: 149 YSFQVAKGMEFLASRKXI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 175
R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 207 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 258
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 222
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 259 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 306
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +
Sbjct: 144 YSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 175
R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 202 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 253
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 222
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 254 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +
Sbjct: 203 YSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 175
R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 261 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 312
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 222
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 313 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 360
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +
Sbjct: 153 YSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 175
R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 211 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 262
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 222
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 263 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +
Sbjct: 190 YSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 175
R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 248 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 299
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 222
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 300 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 20/158 (12%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+R L H +++ K C EK L LV+EYVP R Y + L + L+
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKS---LQLVMEYVPLGSLR----DYLPRHSIGLAQLLLF 122
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPN 113
QIC +AY+H + HR++ +N+L++ + +K+ DFG AK + +G E
Sbjct: 123 AQQICEGMAYLHAQHYI-HRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 114 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
S + ++ APE + Y A+ D+WS G L ELL
Sbjct: 181 DSPV---FWYAPECLKEYKFYYAS-DVWSFGVTLYELL 214
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +
Sbjct: 196 YSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 175
R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 254 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 305
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 222
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 306 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 353
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +
Sbjct: 205 YSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 175
R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 263 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 314
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 222
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 315 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 362
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +
Sbjct: 198 YSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 175
R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 256 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 307
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 222
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 308 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +
Sbjct: 155 YSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 175
R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 213 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 264
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 222
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 265 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 312
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 35/250 (14%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY----VKLYF 61
HPN+VS + S KDEL+L + L +V +IKH + + +
Sbjct: 72 HPNIVSY---YTSFVVKDELWLVMKL-LSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 127
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG------EPNIS 115
++ L Y+H G HRD+K N+L+ +++ DFG + L G + +
Sbjct: 128 REVLEGLEYLHKN-GQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 116 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
++ + + APE++ Y DIWS G EL G P V ++ +
Sbjct: 186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA--PYHKYPPMKVLMLTLQND 243
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
P P ++ K K+ ++S LQ P R TA E L
Sbjct: 244 P-----------------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
Query: 236 IHPFFDELRD 245
H FF + ++
Sbjct: 287 RHKFFQKAKN 296
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +
Sbjct: 144 YSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 175
R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 202 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 253
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 222
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 254 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +
Sbjct: 144 YSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 175
R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 202 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 253
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 222
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 254 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 20/158 (12%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+R L H +++ K C + L LV+EYVP R Y + L + L+
Sbjct: 87 LRTLYHEHIIKYKGC---CEDAGAASLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLF 139
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPN 113
QIC +AY+H + HRD+ +N+L++ + +K+ DFG AK + +G E
Sbjct: 140 AQQICEGMAYLHAQHYI-HRDLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEXYRVREDG 197
Query: 114 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
S + ++ APE + Y A+ D+WS G L ELL
Sbjct: 198 DSPV---FWYAPECLKEYKFYYAS-DVWSFGVTLYELL 231
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 98/249 (39%), Gaps = 35/249 (14%)
Query: 6 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY----VKLYF 61
HPN+VS + S KDEL+L + L +V +IKH + + +
Sbjct: 67 HPNIVSY---YTSFVVKDELWLVMKL-LSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 122
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG------EPNIS 115
++ L Y+H G HRD+K N+L+ +++ DFG + L G + +
Sbjct: 123 REVLEGLEYLHKN-GQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGGDITRNKVRKT 180
Query: 116 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
++ + + APE++ Y DIWS G EL G P V ++ +
Sbjct: 181 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA--PYHKYPPMKVLMLTLQND 238
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
P P ++ K K+ ++S LQ P R TA E L
Sbjct: 239 P-----------------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
Query: 236 IHPFFDELR 244
H FF + +
Sbjct: 282 RHKFFQKAK 290
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 104/245 (42%), Gaps = 47/245 (19%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR +PN+V+ + DEL++ V+EY+ + M +
Sbjct: 71 MRENKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQ-------- 117
Query: 61 FYQICR----ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNIS 115
+CR AL ++H+ V HRDIK N+L+ +KL DFG A++ + +
Sbjct: 118 IAAVCRECLQALEFLHSN-QVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRST 175
Query: 116 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + Y+ APE++ Y +DIWS G + E++ G+P + E+ + L +I GT
Sbjct: 176 MVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGT 233
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
P E + P+ IF+ D ++R L R +A E L
Sbjct: 234 P-------------ELQNPE----KLSAIFR--------DFLNRCLDMDVEKRGSAKELL 268
Query: 236 IHPFF 240
H F
Sbjct: 269 QHQFL 273
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 40/253 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
+R + HPN+++L F + T+ + L+LE V + + +++ ++K
Sbjct: 83 LREIRHPNIITLHDIFENKTD-----VVLILELVSGGELFDFLAEKESLTEDEATQFLK- 136
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H+ + H D+KP+N+++ N ++KL DFG A + G +
Sbjct: 137 ---QILDGVHYLHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI 192
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F GE+ + L I
Sbjct: 193 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI------- 244
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+N ++ E F A D + RLL P R ++L
Sbjct: 245 -----SAVNYDFDEEYFSN-------------TSELAKDFIRRLLVKDPKRRMXIAQSLE 286
Query: 237 HPFFDELRDPNTR 249
H + +R N R
Sbjct: 287 HSWIKAIRRRNVR 299
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 104/245 (42%), Gaps = 47/245 (19%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR +PN+V+ + DEL++ V+EY+ + M +
Sbjct: 71 MRENKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQ-------- 117
Query: 61 FYQICR----ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNIS 115
+CR AL ++H+ V HRDIK N+L+ +KL DFG A++ +
Sbjct: 118 IAAVCRECLQALEFLHSN-QVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSX 175
Query: 116 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + Y+ APE++ Y +DIWS G + E++ G+P + E+ + L +I GT
Sbjct: 176 MVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGT 233
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
P E + P+ IF+ D ++R L+ R +A E L
Sbjct: 234 P-------------ELQNPE----KLSAIFR--------DFLNRCLEMDVEKRGSAKELL 268
Query: 236 IHPFF 240
H F
Sbjct: 269 QHQFL 273
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK-------VLVKGEPN 113
F QI AL+YIH+ G+ HR++KP N+ ++ + +K+ DFG AK +L N
Sbjct: 122 FRQILEALSYIHSQ-GIIHRNLKPXNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 114 I--------SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQ 165
+ S I + Y A E++ G Y ID +S G + E ++P +G ++
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE-----XIYPFSTGXER 234
Query: 166 LVEIIKVLGTPTRE 179
V I+K L + + E
Sbjct: 235 -VNILKKLRSVSIE 247
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI 64
DHP +V L ++ + L +++E+ P I P I V Q+
Sbjct: 66 DHPYIVKLLGAYYHDGK-----LWIMIEFCPGGAVDAIMLELDRGLTEPQIQV--VCRQM 118
Query: 65 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSRYYR 123
AL ++H+ + HRD+K N+L+ ++L DFG SAK L + S+I + Y+
Sbjct: 119 LEALNFLHSK-RIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIGTPYWM 176
Query: 124 APELIF----GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 179
APE++ T Y DIWS G L E+ +P P E
Sbjct: 177 APEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP--------------------PHHE 216
Query: 180 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 239
+NP K K+ P + + E D + L +P R +A + L HPF
Sbjct: 217 ----LNPMRVLLKIA--KSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF 270
Query: 240 FDEL 243
+
Sbjct: 271 VSSI 274
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 82/188 (43%), Gaps = 35/188 (18%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNI--- 114
Y QI AL Y H+ + HRD+KP +L+ + +KL FG A L GE +
Sbjct: 137 YMRQILEALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAG 193
Query: 115 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
+ + ++ APE++ Y +D+W G +L LL G F G ++L E I
Sbjct: 194 GRVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI---- 246
Query: 175 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
+ + K MNP W I + A DLV R+L P R T EA
Sbjct: 247 --IKGKYK-MNPR------------QWSHISES-----AKDLVRRMLMLDPAERITVYEA 286
Query: 235 LIHPFFDE 242
L HP+ E
Sbjct: 287 LNHPWLKE 294
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE-PNISYICSRY 121
+I + L Y+H+ + HRDIK N+L++ +KL DFG A L + +++ + +
Sbjct: 128 EILKGLDYLHSEKKI-HRDIKAANVLLSEQ-GDVKLADFGVAGQLTDTQIKRNTFVGTPF 185
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQP 155
+ APE+I + Y + DIWS G EL G+P
Sbjct: 186 WMAPEVI-QQSAYDSKADIWSLGITAIELAKGEP 218
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 82/188 (43%), Gaps = 35/188 (18%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNI--- 114
Y QI AL Y H+ + HRD+KP +L+ + +KL FG A L GE +
Sbjct: 135 YMRQILEALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAG 191
Query: 115 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 174
+ + ++ APE++ Y +D+W G +L LL G F G ++L E I
Sbjct: 192 GRVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI---- 244
Query: 175 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEA 234
+ + K MNP W I + A DLV R+L P R T EA
Sbjct: 245 --IKGKYK-MNPR------------QWSHISES-----AKDLVRRMLMLDPAERITVYEA 284
Query: 235 LIHPFFDE 242
L HP+ E
Sbjct: 285 LNHPWLKE 292
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 103/245 (42%), Gaps = 47/245 (19%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR +PN+V+ + DEL++ V+EY+ + M +
Sbjct: 71 MRENKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQ-------- 117
Query: 61 FYQICR----ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNIS 115
+CR AL ++H+ V HRDIK N+L+ +KL DFG A++ +
Sbjct: 118 IAAVCRECLQALEFLHSN-QVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSE 175
Query: 116 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + Y+ APE++ Y +DIWS G + E++ G+P + E+ + L +I GT
Sbjct: 176 MVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGT 233
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
P E + P+ IF+ D ++R L R +A E L
Sbjct: 234 P-------------ELQNPE----KLSAIFR--------DFLNRCLDMDVEKRGSAKELL 268
Query: 236 IHPFF 240
H F
Sbjct: 269 QHQFL 273
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 56 YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE-PNI 114
Y+ +I + L Y+H+ + HRDIK N+L++ +KL DFG A L +
Sbjct: 117 YIATILREILKGLDYLHSERKI-HRDIKAANVLLSEQG-DVKLADFGVAGQLTDTQIKRN 174
Query: 115 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQP 155
++ + ++ APE+I + Y DIWS G EL G+P
Sbjct: 175 XFVGTPFWMAPEVI-KQSAYDFKADIWSLGITAIELAKGEP 214
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI 64
DHP +V L ++ + L +++E+ P I P I V Q+
Sbjct: 74 DHPYIVKLLGAYYHDGK-----LWIMIEFCPGGAVDAIMLELDRGLTEPQIQV--VCRQM 126
Query: 65 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSRYYR 123
AL ++H+ + HRD+K N+L+ ++L DFG SAK L + S+I + Y+
Sbjct: 127 LEALNFLHSK-RIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIGTPYWM 184
Query: 124 APELIF----GATEYTAAIDIWSAGCVLAELLLGQP 155
APE++ T Y DIWS G L E+ +P
Sbjct: 185 APEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 220
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 14/156 (8%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI 64
DHPN+V L F+ E L +++E+ + ++ + + +++ Q
Sbjct: 92 DHPNIVKLLDAFYY-----ENNLWILIEFCAGGAVDAV--MLELERPLTESQIQVVCKQT 144
Query: 65 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSRYYR 123
AL Y+H+ + HRD+K N+L +KL DFG SAK + S+I + Y+
Sbjct: 145 LDALNYLHDN-KIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDSFIGTPYWM 202
Query: 124 APELIFGATE----YTAAIDIWSAGCVLAELLLGQP 155
APE++ T Y D+WS G L E+ +P
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 14/156 (8%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI 64
DHPN+V L F+ E L +++E+ + ++ + + +++ Q
Sbjct: 92 DHPNIVKLLDAFYY-----ENNLWILIEFCAGGAVDAV--MLELERPLTESQIQVVCKQT 144
Query: 65 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSRYYR 123
AL Y+H+ + HRD+K N+L +KL DFG SAK + S+I + Y+
Sbjct: 145 LDALNYLHDN-KIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTIQRRDSFIGTPYWM 202
Query: 124 APELIFGATE----YTAAIDIWSAGCVLAELLLGQP 155
APE++ T Y D+WS G L E+ +P
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 47/245 (19%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR +PN+V+ + DEL++ V+EY+ + M +
Sbjct: 72 MRENKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQ-------- 118
Query: 61 FYQICR----ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNIS 115
+CR AL ++H+ V HRDIK N+L+ +KL DFG A++ +
Sbjct: 119 IAAVCRECLQALEFLHSN-QVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSX 176
Query: 116 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + Y+ APE++ Y +DIWS G + E++ G+P + E+ + L +I GT
Sbjct: 177 MVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGT 234
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
P E + P+ IF+ D ++R L+ R +A E +
Sbjct: 235 P-------------ELQNPE----KLSAIFR--------DFLNRCLEMDVEKRGSAKELI 269
Query: 236 IHPFF 240
H F
Sbjct: 270 QHQFL 274
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 20/158 (12%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
+R L H ++V K C EK + LV+EYVP R Y + L + L+
Sbjct: 65 LRTLYHEHIVKYKGCCEDQGEKS---VQLVMEYVPLGSLR----DYLPRHCVGLAQLLLF 117
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPN 113
QIC +AY+H + HR + +N+L++ + +K+ DFG AK + +G E
Sbjct: 118 AQQICEGMAYLHAQHYI-HRALAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDG 175
Query: 114 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
S + ++ APE + Y A+ D+WS G L ELL
Sbjct: 176 DSPV---FWYAPECLKECKFYYAS-DVWSFGVTLYELL 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 24/160 (15%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHR--VIKHHYKMSQRMPLIYVK 58
+R L H ++V K C EK + LV+EYVP R + +H ++Q +
Sbjct: 64 LRTLYHEHIVKYKGCCEDQGEKS---VQLVMEYVPLGSLRDYLPRHCVGLAQLL------ 114
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------E 111
L+ QIC +AY+H + HR + +N+L++ + +K+ DFG AK + +G E
Sbjct: 115 LFAQQICEGMAYLHAQHYI-HRALAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVRE 172
Query: 112 PNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
S + ++ APE + Y A+ D+WS G L ELL
Sbjct: 173 DGDSPV---FWYAPECLKECKFYYAS-DVWSFGVTLYELL 208
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
F QI + + YIH+ + HRD+KP N+ + T Q+K+ DFG L +
Sbjct: 142 FEQITKGVDYIHSK-KLIHRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRTRSKGTL 199
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
Y +PE I + +Y +D+++ G +LAELL
Sbjct: 200 RYMSPEQI-SSQDYGKEVDLYALGLILAELL 229
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y +Q+ + + ++ + + HRD+ +N+L++ + +K+ DFG A+ + K + +
Sbjct: 149 YSFQVAKGMEFLASRKXI-HRDLAARNILLS-EKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 175
R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 207 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFXR 258
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 222
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 259 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 306
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 47/245 (19%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR +PN+V+ + DEL++ V+EY+ + M +
Sbjct: 72 MRENKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQ-------- 118
Query: 61 FYQICR----ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNIS 115
+CR AL ++H+ V HR+IK N+L+ +KL DFG A++ + +
Sbjct: 119 IAAVCRECLQALEFLHSN-QVIHRNIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRST 176
Query: 116 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 175
+ + Y+ APE++ Y +DIWS G + E++ G+P + E+ + L +I GT
Sbjct: 177 MVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGT 234
Query: 176 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL 235
P E + P+ IF+ D ++R L+ R +A E +
Sbjct: 235 P-------------ELQNPE----KLSAIFR--------DFLNRCLEMDVEKRGSAKELI 269
Query: 236 IHPFF 240
H F
Sbjct: 270 QHQFL 274
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
M DHPN++ L+ + + +V EY+ ++ ++ H + +I +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVG 151
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
I + Y+ + +G HRD+ +N+L+N + K+ DFG A+VL + +P +Y
Sbjct: 152 MLRGIASGMKYLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLARVL-EDDPEAAYTTR 208
Query: 120 R-----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ +PE I ++T+A D+WS G VL E++
Sbjct: 209 GGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 20/175 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR DHP++V L ++ +++ + L + E R K S + L + LY
Sbjct: 65 MRQFDHPHIVKL----IGVITENPVWIIMELCTLGEL--RSFLQVRKFS--LDLASLILY 116
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
YQ+ ALAY+ + V HRDI +N+LV+ T +KL DFG ++ + E + Y S+
Sbjct: 117 AYQLSTALAYLESKRFV-HRDIAARNVLVSA-TDCVKLGDFGLSRYM---EDSTYYKASK 171
Query: 121 -----YYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 169
+ APE I +T+A D+W G + E+L+ G F G D + I
Sbjct: 172 GKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
+ YQ+ + +A++ + HRD+ +N+L+ H K+CDFG A+ +K + N Y+
Sbjct: 150 FSYQVAKGMAFLASK-NCIHRDLAARNILLT-HGRITKICDFGLARD-IKNDSN--YVVK 204
Query: 120 RYYR------APELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKV 172
R APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 205 GNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK- 262
Query: 173 LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKR-MPPEAVDLVSRLLQYSPN 226
E + ++P + + I W KR + V L+ + + S N
Sbjct: 263 ------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 311
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
+ YQ+ + +A++ + HRD+ +N+L+ H K+CDFG A+ +K + N Y+
Sbjct: 168 FSYQVAKGMAFLASK-NCIHRDLAARNILLT-HGRITKICDFGLARD-IKNDSN--YVVK 222
Query: 120 RYYR------APELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKV 172
R APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 223 GNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK- 280
Query: 173 LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKR-MPPEAVDLVSRLLQYSPN 226
E + ++P + + I W KR + V L+ + + S N
Sbjct: 281 ------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 329
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
+ YQ+ + +A++ + HRD+ +N+L+ H K+CDFG A+ +K + N Y+
Sbjct: 166 FSYQVAKGMAFLASK-NCIHRDLAARNILLT-HGRITKICDFGLARD-IKNDSN--YVVK 220
Query: 120 RYYR------APELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKV 172
R APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 221 GNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK- 278
Query: 173 LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKR-MPPEAVDLVSRLLQYSPN 226
E + ++P + + I W KR + V L+ + + S N
Sbjct: 279 ------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 327
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
+ YQ+ + +A++ + HRD+ +N+L+ H K+CDFG A+ +K + N Y+
Sbjct: 173 FSYQVAKGMAFLASK-NCIHRDLAARNILLT-HGRITKICDFGLARD-IKNDSN--YVVK 227
Query: 120 RYYR------APELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKV 172
R APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 228 GNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK- 285
Query: 173 LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKR-MPPEAVDLVSRLLQYSPN 226
E + ++P + + I W KR + V L+ + + S N
Sbjct: 286 ------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 334
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 20/175 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR DHP++V L ++ +++ + L + E R K S + L + LY
Sbjct: 445 MRQFDHPHIVKL----IGVITENPVWIIMELCTLGEL--RSFLQVRKFS--LDLASLILY 496
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
YQ+ ALAY+ + V HRDI +N+LV+ T +KL DFG ++ + E + Y S+
Sbjct: 497 AYQLSTALAYLESKRFV-HRDIAARNVLVSA-TDCVKLGDFGLSRYM---EDSTYYKASK 551
Query: 121 -----YYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 169
+ APE I +T+A D+W G + E+L+ G F G D + I
Sbjct: 552 GKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI 64
DHPN+V L F+ E L +++E+ + ++ + + +++ Q
Sbjct: 92 DHPNIVKLLDAFYY-----ENNLWILIEFCAGGAVDAV--MLELERPLTESQIQVVCKQT 144
Query: 65 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSRYYR 123
AL Y+H+ + HRD+K N+L +KL DFG SAK + +I + Y+
Sbjct: 145 LDALNYLHDN-KIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDXFIGTPYWM 202
Query: 124 APELIFGATE----YTAAIDIWSAGCVLAELLLGQP 155
APE++ T Y D+WS G L E+ +P
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK-------VLVKGEP 112
+ YQ+ + +A++ + HRD+ +N+L+ H K+CDFG A+ +VKG
Sbjct: 173 FSYQVAKGMAFLASK-NCIHRDLAARNILLT-HGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 113 NISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIK 171
+ + APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 231 RLPV----KWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
Query: 172 VLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKR-MPPEAVDLVSRLLQYSPN 226
E + ++P + + I W KR + V L+ + + S N
Sbjct: 286 -------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 334
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
++ + HPNV++L + + T+ + L+LE V + + +++ ++K
Sbjct: 68 LKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G +
Sbjct: 122 ---QILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------- 229
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+N + + F A A D + RLL P R T ++L
Sbjct: 230 -----SAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
++ + HPNV++L + + T+ + L+LE V + + +++ ++K
Sbjct: 68 LKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G +
Sbjct: 122 ---QILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------- 229
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+N + + F A A D + RLL P R T ++L
Sbjct: 230 -----SAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
M DHPN++ L+ + + +V EY+ ++ ++ H + +I +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVG 151
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
I + Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y
Sbjct: 152 MLRGIASGMKYLSD-MGFVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTR 208
Query: 120 R-----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ +PE I ++T+A D+WS G VL E++
Sbjct: 209 GGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
++ + HPNV++L + + T+ + L+LE V + + +++ ++K
Sbjct: 68 LKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G +
Sbjct: 122 ---QILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------- 229
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+N + + F A A D + RLL P R T ++L
Sbjct: 230 -----SAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
++ + HPNV++L + + T+ + L+LE V + + +++ ++K
Sbjct: 68 LKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G +
Sbjct: 122 ---QILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------- 229
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+N + + F A A D + RLL P R T ++L
Sbjct: 230 -----SAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
++ + HPNV++L + + T+ + L+LE V + + +++ ++K
Sbjct: 67 LKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK- 120
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G +
Sbjct: 121 ---QILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 176
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L +
Sbjct: 177 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------- 228
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+N + + F A A D + RLL P R T ++L
Sbjct: 229 -----SAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 270
Query: 237 HPF 239
HP+
Sbjct: 271 HPW 273
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
++HPN+V L + + LV+EY + H + + + Q
Sbjct: 59 VNHPNIVKLYGACLNP-------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ 111
Query: 64 ICRALAYIHNT--IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 121
+ +AY+H+ + HRD+KP NLL+ LK+CDFG+A + N S
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAA 169
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELL--------LGQPLF 157
+ APE +F + Y+ D++S G +L E++ +G P F
Sbjct: 170 WMAPE-VFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF 212
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
++ + HPNV++L + + T+ + L+LE V + + +++ ++K
Sbjct: 68 LKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G +
Sbjct: 122 ---QILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------- 229
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+N + + F A A D + RLL P R T ++L
Sbjct: 230 -----SAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 20/175 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR DHP++V L ++ +++ + L + E + Y + L + LY
Sbjct: 65 MRQFDHPHIVKL----IGVITENPVWIIMELCTLGELRSFLQVRKYSLD----LASLILY 116
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
YQ+ ALAY+ + V HRDI +N+LV+ + +KL DFG ++ + E + Y S+
Sbjct: 117 AYQLSTALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASK 171
Query: 121 -----YYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 169
+ APE I +T+A D+W G + E+L+ G F G D + I
Sbjct: 172 GKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
++ + HPNV++L + + T+ + L+LE V + + +++ ++K
Sbjct: 67 LKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK- 120
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G +
Sbjct: 121 ---QILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 176
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L +
Sbjct: 177 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------- 228
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+N + + F A A D + RLL P R T ++L
Sbjct: 229 -----SAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 270
Query: 237 HPF 239
HP+
Sbjct: 271 HPW 273
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
++ + HPNV++L + + T+ + L+LE V + + +++ ++K
Sbjct: 68 LKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G +
Sbjct: 122 ---QILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------- 229
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+N + + F A A D + RLL P R T ++L
Sbjct: 230 -----SAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 20/175 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR DHP++V L ++ +++ + L + E + Y + L + LY
Sbjct: 65 MRQFDHPHIVKL----IGVITENPVWIIMELCTLGELRSFLQVRKYSLD----LASLILY 116
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
YQ+ ALAY+ + V HRDI +N+LV+ + +KL DFG ++ + E + Y S+
Sbjct: 117 AYQLSTALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASK 171
Query: 121 -----YYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 169
+ APE I +T+A D+W G + E+L+ G F G D + I
Sbjct: 172 GKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 63
++HPN+V L + + LV+EY + H + + + Q
Sbjct: 58 VNHPNIVKLYGACLNP-------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ 110
Query: 64 ICRALAYIHNT--IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 121
+ +AY+H+ + HRD+KP NLL+ LK+CDFG+A + N S
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAA 168
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELL--------LGQPLF 157
+ APE +F + Y+ D++S G +L E++ +G P F
Sbjct: 169 WMAPE-VFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 20/175 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR DHP++V L ++ +++ + L + E + Y + L + LY
Sbjct: 93 MRQFDHPHIVKL----IGVITENPVWIIMELCTLGELRSFLQVRKYSLD----LASLILY 144
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
YQ+ ALAY+ + V HRDI +N+LV+ + +KL DFG ++ + E + Y S+
Sbjct: 145 AYQLSTALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASK 199
Query: 121 -----YYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 169
+ APE I +T+A D+W G + E+L+ G F G D + I
Sbjct: 200 GKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 253
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 20/175 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR DHP++V L ++ +++ + L + E + Y + L + LY
Sbjct: 68 MRQFDHPHIVKL----IGVITENPVWIIMELCTLGELRSFLQVRKYSLD----LASLILY 119
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
YQ+ ALAY+ + V HRDI +N+LV+ + +KL DFG ++ + E + Y S+
Sbjct: 120 AYQLSTALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASK 174
Query: 121 -----YYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 169
+ APE I +T+A D+W G + E+L+ G F G D + I
Sbjct: 175 GKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 228
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 20/175 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR DHP++V L ++ +++ + L + E + Y + L + LY
Sbjct: 70 MRQFDHPHIVKL----IGVITENPVWIIMELCTLGELRSFLQVRKYSLD----LASLILY 121
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
YQ+ ALAY+ + V HRDI +N+LV+ + +KL DFG ++ + E + Y S+
Sbjct: 122 AYQLSTALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASK 176
Query: 121 -----YYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 169
+ APE I +T+A D+W G + E+L+ G F G D + I
Sbjct: 177 GKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 230
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 20/175 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR DHP++V L ++ +++ + L + E + Y + L + LY
Sbjct: 67 MRQFDHPHIVKL----IGVITENPVWIIMELCTLGELRSFLQVRKYSLD----LASLILY 118
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
YQ+ ALAY+ + V HRDI +N+LV+ + +KL DFG ++ + E + Y S+
Sbjct: 119 AYQLSTALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASK 173
Query: 121 -----YYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 169
+ APE I +T+A D+W G + E+L+ G F G D + I
Sbjct: 174 GKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 227
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 20/175 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR DHP++V L ++ +++ + L + E + Y + L + LY
Sbjct: 62 MRQFDHPHIVKL----IGVITENPVWIIMELCTLGELRSFLQVRKYSLD----LASLILY 113
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
YQ+ ALAY+ + V HRDI +N+LV+ + +KL DFG ++ + E + Y S+
Sbjct: 114 AYQLSTALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASK 168
Query: 121 -----YYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 169
+ APE I +T+A D+W G + E+L+ G F G D + I
Sbjct: 169 GKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 222
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
M DHPN++ L+ + + +V EY+ ++ ++ H + +I +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVG 151
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
I + Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y
Sbjct: 152 MLRGIASGMKYLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTR 208
Query: 120 R-----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ +PE I ++T+A D+WS G VL E++
Sbjct: 209 GGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
++ + HPNV++L + + T+ + L+LE V + + +++ ++K
Sbjct: 68 LKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G +
Sbjct: 122 ---QILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------- 229
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+N + + F A A D + RLL P R T ++L
Sbjct: 230 -----SAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
M DHPN++ L+ + + +V EY+ ++ ++ H + +I +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVG 151
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
I + Y+ + +G HRD+ +N+L+N + K+ DFG +VL + +P +Y
Sbjct: 152 MLRGIASGMKYLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLGRVL-EDDPEAAYTTR 208
Query: 120 R-----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ +PE I ++T+A D+WS G VL E++
Sbjct: 209 GGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 80/196 (40%), Gaps = 47/196 (23%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPH--THQLKLCDFGSAKVLVKGEPNISYICSRY 121
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK GE
Sbjct: 126 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-GE---------- 173
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 181
+Y + D+WS G ++ LL G P F G + I + T R
Sbjct: 174 -----------KYDKSCDMWSLGVIMYILLCGYPPFYSNHG----LAISPGMKTRIR--- 215
Query: 182 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF-F 240
+++FP + W ++ + E L+ LL+ P R T E + HP+
Sbjct: 216 ------MGQYEFPNPE---WSEVSE-----EVKMLIRNLLKTEPTQRMTITEFMNHPWIM 261
Query: 241 DELRDPNTRLPNGRFL 256
+ P T L R L
Sbjct: 262 QSTKVPQTPLHTSRVL 277
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
M DHPN++ L+ + + +V EY+ ++ ++ H + +I +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVG 151
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
I + Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y
Sbjct: 152 MLRGIASGMKYLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTR 208
Query: 120 R-----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ +PE I ++T+A D+WS G VL E++
Sbjct: 209 GGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
M DHPN++ L+ + + +V EY+ ++ ++ H + +I +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVG 151
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
I + Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y
Sbjct: 152 MLRGIASGMKYLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTR 208
Query: 120 R-----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ +PE I ++T+A D+WS G VL E++
Sbjct: 209 GGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
M DHPN++ L+ + + +V EY+ ++ ++ H + +I +
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVG 149
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
I + Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y
Sbjct: 150 MLRGIASGMKYLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTR 206
Query: 120 R-----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ +PE I ++T+A D+WS G VL E++
Sbjct: 207 GGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 242
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
++ + HPNV++L + + T+ + L+LE V + + +++ ++K
Sbjct: 68 LKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G +
Sbjct: 122 ---QILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------- 229
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+N + + F A A D + RLL P R T ++L
Sbjct: 230 -----SAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 5 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI 64
DHPN+V L F+ E L +++E+ + ++ + + +++ Q
Sbjct: 65 DHPNIVKLLDAFYY-----ENNLWILIEFCAGGAVDAV--MLELERPLTESQIQVVCKQT 117
Query: 65 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAK-VLVKGEPNISYICSRYY 122
AL Y+H+ + HRD+K N+L +KL DFG SAK + S+I + Y+
Sbjct: 118 LDALNYLHDN-KIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTXIQRRDSFIGTPYW 175
Query: 123 RAPELIFGATE----YTAAIDIWSAGCVLAELLLGQP 155
APE++ T Y D+WS G L E+ +P
Sbjct: 176 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 212
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
M DHPN++ L+ + + +V EY+ ++ ++ H + +I +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVG 151
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
I + Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y
Sbjct: 152 MLRGIASGMKYLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTR 208
Query: 120 R-----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ +PE I ++T+A D+WS G VL E++
Sbjct: 209 GGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
M DHPN++ L+ + + +V EY+ ++ ++ H + +I +
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVG 139
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
I + Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y
Sbjct: 140 MLRGIASGMKYLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTR 196
Query: 120 R-----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ +PE I ++T+A D+WS G VL E++
Sbjct: 197 GGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 232
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
M DHPN++ L+ + + +V EY+ ++ ++ H + +I +
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVG 122
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
I + Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y
Sbjct: 123 MLRGIASGMKYLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTR 179
Query: 120 R-----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ +PE I ++T+A D+WS G VL E++
Sbjct: 180 GGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 215
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 20/175 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR DHP++V L ++ +++ + L + E R K S + L + LY
Sbjct: 445 MRQFDHPHIVKL----IGVITENPVWIIMELCTLGEL--RSFLQVRKFS--LDLASLILY 496
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
YQ+ ALAY+ + V HRDI +N+LV+ + +KL DFG ++ + E + Y S+
Sbjct: 497 AYQLSTALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASK 551
Query: 121 -----YYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 169
+ APE I +T+A D+W G + E+L+ G F G D + I
Sbjct: 552 GKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
++ + HPNV++L + + T+ + L+LE V + + +++ ++K
Sbjct: 68 LKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G +
Sbjct: 122 ---QILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------- 229
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+N + + F A A D + RLL P R T ++L
Sbjct: 230 -----SAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
+R + HPN+++L + + T+ + L+LE V + + +S+ ++K
Sbjct: 69 LRQVLHPNIITLHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK- 122
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H T + H D+KP+N+++ N +KL DFG A + G +
Sbjct: 123 ---QILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L I V
Sbjct: 179 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV---- 233
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
++ + + F + A D + +LL R T EAL
Sbjct: 234 ---------------------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272
Query: 237 HPF 239
HP+
Sbjct: 273 HPW 275
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVK--GEPNISYICSR 120
+I R L+++H V HRDIK QN+L+ + ++KL DFG + L + G N ++I +
Sbjct: 137 EILRGLSHLHQH-KVIHRDIKGQNVLLTENA-EVKLVDFGVSAQLDRTVGRRN-TFIGTP 193
Query: 121 YYRAPELIF-----GATEYTAAIDIWSAGCVLAELLLGQP 155
Y+ APE+I AT Y D+WS G E+ G P
Sbjct: 194 YWMAPEVIACDENPDAT-YDFKSDLWSLGITAIEMAEGAP 232
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 18/157 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
M DHPN++ L+ + L + +V EY+ ++ ++ H M L+ +
Sbjct: 104 MGQFDHPNIIRLE----GVVTRGRLAM-IVTEYMENGSLDTFLRTHDGQFTIMQLVGM-- 156
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
+ + Y+ + +G HRD+ +N+LV+ + K+ DFG ++VL + +P+ +Y +
Sbjct: 157 -LRGVGAGMRYLSD-LGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVL-EDDPDAAYTTT 212
Query: 120 R-----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ APE I T +++A D+WS G V+ E+L
Sbjct: 213 GGKIPIRWTAPEAIAFRT-FSSASDVWSFGVVMWEVL 248
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
F QI + + YIH+ + +RD+KP N+ + T Q+K+ DFG L +
Sbjct: 128 FEQITKGVDYIHSK-KLINRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRXRSKGTL 185
Query: 121 YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
Y +PE I + +Y +D+++ G +LAELL
Sbjct: 186 RYMSPEQI-SSQDYGKEVDLYALGLILAELL 215
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 16/156 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M DHPN++ L+ T K + + +E ++ ++ H + +I +
Sbjct: 100 MGQFDHPNIIRLEGVV--TKSKPVMIVTEXMEN--GSLDSFLRKH---DAQFTVIQLVGM 152
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
I + Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y
Sbjct: 153 LRGIASGMKYLSD-MGAVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRG 209
Query: 121 -----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ +PE I ++T+A D+WS G VL E++
Sbjct: 210 GKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 105/245 (42%), Gaps = 28/245 (11%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVH--RVIKHHYKMSQRMPLIYVKLYF 61
++H N++ + F +++ + LV+E + I H ++ + PL F
Sbjct: 86 VEHANIIKVLDIF-----ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDE--PL--ASYIF 136
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 121
Q+ A+ Y+ + HRDIK +N+++ +KL DFGSA L +G+ ++ +
Sbjct: 137 RQLVSAVGYLRLK-DIIHRDIKDENIVI-AEDFTIKLIDFGSAAYLERGKLFYTFCGTIE 194
Query: 122 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVD-----------QLVEI 169
Y APE++ G +++WS G L L+ + P E V+ +L+ +
Sbjct: 195 YCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSL 254
Query: 170 IKVLGTPTREEIKCMNPNYTEFKFPQ---IKAHPWHKIFQKRMPPEAVDLVSRLLQYSPN 226
+ L P E + T+ Q + + W ++F+ P V + L + +
Sbjct: 255 VSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPESGVLSAASLEMGNRS 314
Query: 227 LRSTA 231
L A
Sbjct: 315 LSDVA 319
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
+R + HPN+++L F + T+ + L+LE V + + +++ ++K
Sbjct: 69 LREIRHPNIITLHDIFENKTD-----VVLILELVSGGELFDFLAEKESLTEDEATQFLK- 122
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H+ + H D+KP+N+++ N ++KL DFG A + G +
Sbjct: 123 ---QILDGVHYLHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI 178
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F GE+ + L
Sbjct: 179 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT--------- 228
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
I +N ++ E F A D + RLL P R ++L
Sbjct: 229 ---NISAVNYDFDEEYFSN-------------TSELAKDFIRRLLVKDPKRRMXIAQSLE 272
Query: 237 HPF 239
H +
Sbjct: 273 HSW 275
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
++ + HPNV++L + + T+ + L+LE V + + +++ ++K
Sbjct: 68 LKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G +
Sbjct: 122 ---QILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L +
Sbjct: 178 FGTPAFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------- 229
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+N + + F A A D + RLL P R T ++L
Sbjct: 230 -----SAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
++ + HPNV++L + + T+ + L+LE V + + +++ ++K
Sbjct: 68 LKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G +
Sbjct: 122 ---QILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------- 229
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+N + + F A A D + RLL P R T ++L
Sbjct: 230 -----SAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y Q L Y+H+ + H D+K N+L++ LCDFG A L S +
Sbjct: 190 YLGQALEGLEYLHSRR-ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTG 248
Query: 120 RY------YRAPELIFGATEYTAAIDIWSAGCVLAELLLG 153
Y + APE++ G + A +D+WS+ C++ +L G
Sbjct: 249 DYIPGTETHMAPEVVLGRS-CDAKVDVWSSCCMMLHMLNG 287
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y Q L Y+H T + H D+K N+L++ + LCDFG A L S +
Sbjct: 171 YLGQALEGLEYLH-TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 229
Query: 120 RY------YRAPELIFGATEYTAAIDIWSAGCVLAELLLG 153
Y + APE++ G A +DIWS+ C++ +L G
Sbjct: 230 DYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMMLHMLNG 268
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y Q L Y+H T + H D+K N+L++ + LCDFG A L S +
Sbjct: 169 YLGQALEGLEYLH-TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 227
Query: 120 RY------YRAPELIFGATEYTAAIDIWSAGCVLAELLLG 153
Y + APE++ G A +DIWS+ C++ +L G
Sbjct: 228 DYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMMLHMLNG 266
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y Q L Y+H T + H D+K N+L++ + LCDFG A L S +
Sbjct: 155 YLGQALEGLEYLH-TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 213
Query: 120 RY------YRAPELIFGATEYTAAIDIWSAGCVLAELLLG 153
Y + APE++ G A +DIWS+ C++ +L G
Sbjct: 214 DYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMMLHMLNG 252
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 16/156 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M DHPN++ L+ T K + + +E ++ ++ H + +I +
Sbjct: 100 MGQFDHPNIIRLEGVV--TKSKPVMIVTEXME--NGSLDSFLRKH---DAQFTVIQLVGM 152
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
I + Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y
Sbjct: 153 LRGIASGMKYLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRG 209
Query: 121 -----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ +PE I ++T+A D+WS G VL E++
Sbjct: 210 GKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 16/156 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M DHPN++ L+ T K + + +E ++ ++ H + +I +
Sbjct: 71 MGQFDHPNIIRLEGVV--TKSKPVMIVTEXME--NGSLDSFLRKH---DAQFTVIQLVGM 123
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
I + Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y
Sbjct: 124 LRGIASGMKYLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRG 180
Query: 121 -----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ +PE I ++T+A D+WS G VL E++
Sbjct: 181 GKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 215
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ LDHP++V L E++ ++ + L E H + ++ + ++ + LY
Sbjct: 79 MKNLDHPHIVKL----IGIIEEEPTWIIMELYPYGELGHYLERN----KNSLKVLTLVLY 130
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
QIC+A+AY+ +I HRDI +N+LV +KL DFG ++ ++ E +R
Sbjct: 131 SLQICKAMAYLE-SINCVHRDIAVRNILV-ASPECVKLGDFGLSR-YIEDEDYYKASVTR 187
Query: 121 Y---YRAPELIFGATEYTAAIDIWSAGCVLAELLL--GQPLF 157
+ +PE I +T A D+W + E+L QP F
Sbjct: 188 LPIKWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFF 228
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 46/200 (23%)
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEP-------- 112
F QI A+ ++H+ G+ HRD+KP N+ +K+ DFG + + E
Sbjct: 124 FLQIAEAVEFLHSK-GLMHRDLKPSNIFFT-MDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 113 -----NISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLV 167
+ + ++ Y +PE I G + Y+ +DI+S G +L EL L+P + ++++
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFEL-----LYPFSTQMERVR 235
Query: 168 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNL 227
+ V KFP +F ++ P E V +V +L SP
Sbjct: 236 TLTDV----------------RNLKFP--------PLFTQKYPCEYV-MVQDMLSPSPME 270
Query: 228 RSTALEALIHPFFDELRDPN 247
R A+ + + F++L P
Sbjct: 271 RPEAINIIENAVFEDLDFPG 290
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ LDHP++V L E++ ++ + L E H + ++ + ++ + LY
Sbjct: 63 MKNLDHPHIVKL----IGIIEEEPTWIIMELYPYGELGHYLERN----KNSLKVLTLVLY 114
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
QIC+A+AY+ +I HRDI +N+LV +KL DFG ++ ++ E +R
Sbjct: 115 SLQICKAMAYLE-SINCVHRDIAVRNILV-ASPECVKLGDFGLSR-YIEDEDYYKASVTR 171
Query: 121 Y---YRAPELIFGATEYTAAIDIWSAGCVLAELLL--GQPLF 157
+ +PE I +T A D+W + E+L QP F
Sbjct: 172 LPIKWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFF 212
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 121
YQ+ + + ++ V HRD+ +N+LV H +K+CDFG A+ ++ + +R
Sbjct: 179 YQVAKGMEFLEFKSCV-HRDLAARNVLV-THGKVVKICDFGLARDIMSDSNYVVRGNARL 236
Query: 122 ---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 159
+ APE +F YT D+WS G +L E+ LG +PG
Sbjct: 237 PVKWMAPESLFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ LDHP++V L E++ ++ + L E H + ++ + ++ + LY
Sbjct: 67 MKNLDHPHIVKL----IGIIEEEPTWIIMELYPYGELGHYLERN----KNSLKVLTLVLY 118
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
QIC+A+AY+ +I HRDI +N+LV +KL DFG ++ ++ E +R
Sbjct: 119 SLQICKAMAYLE-SINCVHRDIAVRNILV-ASPECVKLGDFGLSR-YIEDEDYYKASVTR 175
Query: 121 Y---YRAPELIFGATEYTAAIDIWSAGCVLAELLL--GQPLF 157
+ +PE I +T A D+W + E+L QP F
Sbjct: 176 LPIKWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFF 216
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 26/178 (14%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR DHP++V L ++ +++ + L + E R K S + L + LY
Sbjct: 65 MRQFDHPHIVKL----IGVITENPVWIIMELCTLGEL--RSFLQVRKFS--LDLASLILY 116
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL--------VKGEP 112
YQ+ ALAY+ + V HRDI +N+LV+ + +KL DFG ++ + KG+
Sbjct: 117 AYQLSTALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTXXKASKGKL 174
Query: 113 NISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 169
I ++ APE I +T+A D+W G + E+L+ G F G D + I
Sbjct: 175 PIKWM------APESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
M DHPN++ L+ + + +V EY+ ++ +K K + +I +
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKP-----VMIVTEYMENGSLDTFLK---KNDGQFTVIQLVG 128
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
I + Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y
Sbjct: 129 MLRGISAGMKYLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTR 185
Query: 120 R-----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ APE I ++T+A D+WS G V+ E++
Sbjct: 186 GGKIPIRWTAPEAI-AFRKFTSASDVWSYGIVMWEVV 221
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 28/173 (16%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 61
++ HP V L+ + E LYL L + +H +P V Y
Sbjct: 112 KVGQHPCCVRLEQAW---EEGGILYLQTEL-----CGPSLQQHCEAWGASLPEAQVWGYL 163
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG--------SAKVLVKGEPN 113
ALA++H+ G+ H D+KP N+ + P + KL DFG A + +G+P
Sbjct: 164 RDTLLALAHLHSQ-GLVHLDVKPANIFLGPRG-RCKLGDFGLLVELGTAGAGEVQEGDPR 221
Query: 114 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQL 166
Y APEL+ G+ Y A D++S G + E+ L G G QL
Sbjct: 222 --------YMAPELLQGS--YGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
++ + HPNV++L + + T+ + L+ E V + + +++ ++K
Sbjct: 68 LKEIQHPNVITLHEVYENKTD-----VILIGELVAGGELFDFLAEKESLTEEEATEFLK- 121
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G +
Sbjct: 122 ---QILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------- 229
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
+N + + F A A D + RLL P R T ++L
Sbjct: 230 -----SAVNYEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 237 HPF 239
HP+
Sbjct: 272 HPW 274
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 112/298 (37%), Gaps = 52/298 (17%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 61
+L +HPN+V + F + +EL++ + H + + Y+
Sbjct: 65 KLFNHPNIVPYRATFIA---DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI---L 118
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHT--------HQLKLCDFGSAKVLVKGEPN 113
+ +AL YIH+ +G HR +K ++L++ L + G + +V P
Sbjct: 119 QGVLKALDYIHH-MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPK 177
Query: 114 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVL 173
S + L Y A DI+S G EL G F L+E K+
Sbjct: 178 YSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE--KLN 235
Query: 174 GT------------------PTR--------EEIKCMNPNYTEFKFPQIKAHPWHKIFQK 207
GT P+R + + P + P +HP+H+ F
Sbjct: 236 GTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSP---SHPYHRTFS- 291
Query: 208 RMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDEL-RDPNTRLPN-GRFLPPLFNFK 263
P V + LQ +P+ R +A L H FF ++ R + LP R + P+ NF+
Sbjct: 292 ---PHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFE 346
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 100/243 (41%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
+R + H NV++L + + T+ + L+LE V + + +S+ ++K
Sbjct: 69 LRQVLHHNVITLHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK- 122
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H T + H D+KP+N+++ N +KL DFG A + G +
Sbjct: 123 ---QILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L I V
Sbjct: 179 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV---- 233
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
++ + + F + A D + +LL R T EAL
Sbjct: 234 ---------------------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272
Query: 237 HPF 239
HP+
Sbjct: 273 HPW 275
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y Q L Y+H+ + H D+K N+L++ LCDFG A L +
Sbjct: 171 YLGQALEGLEYLHSRR-ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTG 229
Query: 120 RY------YRAPELIFGATEYTAAIDIWSAGCVLAELLLG 153
Y + APE++ G + A +D+WS+ C++ +L G
Sbjct: 230 DYIPGTETHMAPEVVLGRS-CDAKVDVWSSCCMMLHMLNG 268
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 112/298 (37%), Gaps = 52/298 (17%)
Query: 2 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 61
+L +HPN+V + F + +EL++ + H + + Y+
Sbjct: 81 KLFNHPNIVPYRATFIA---DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI---L 134
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHT--------HQLKLCDFGSAKVLVKGEPN 113
+ +AL YIH+ +G HR +K ++L++ L + G + +V P
Sbjct: 135 QGVLKALDYIHH-MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPK 193
Query: 114 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVL 173
S + L Y A DI+S G EL G F L+E K+
Sbjct: 194 YSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE--KLN 251
Query: 174 GT------------------PTR--------EEIKCMNPNYTEFKFPQIKAHPWHKIFQK 207
GT P+R + + P + P +HP+H+ F
Sbjct: 252 GTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSP---SHPYHRTFS- 307
Query: 208 RMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDEL-RDPNTRLPN-GRFLPPLFNFK 263
P V + LQ +P+ R +A L H FF ++ R + LP R + P+ NF+
Sbjct: 308 ---PHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFE 362
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 100/243 (41%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
+R + H NV++L + + T+ + L+LE V + + +S+ ++K
Sbjct: 69 LRQVLHHNVITLHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK- 122
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H T + H D+KP+N+++ N +KL DFG A + G +
Sbjct: 123 ---QILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L I V
Sbjct: 179 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV---- 233
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
++ + + F + A D + +LL R T EAL
Sbjct: 234 ---------------------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272
Query: 237 HPF 239
HP+
Sbjct: 273 HPW 275
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 96/240 (40%), Gaps = 39/240 (16%)
Query: 7 PNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQI 64
P V++L + +T+E + L+LEY E + +M +I + QI
Sbjct: 89 PRVINLHEVYENTSE-----IILILEYAAGGEIFSLCLPELAEMVSENDVIRL---IKQI 140
Query: 65 CRALAYIHNTIGVCHRDIKPQNLLVNPH--THQLKLCDFGSAKVLVKGEPNISYICSRYY 122
+ Y+H + H D+KPQN+L++ +K+ DFG ++ + + + Y
Sbjct: 141 LEGVYYLHQN-NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEY 199
Query: 123 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 182
APE I T A D+W+ G + LL F GE + + I +V
Sbjct: 200 LAPE-ILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV---------- 248
Query: 183 CMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDE 242
N +Y+E F + A D + LL +P R TA L H + +
Sbjct: 249 --NVDYSEETFSSVSQL-------------ATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 16/156 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M DHPN++ L+ + ++ EY+ K R +I +
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKP-----VMIITEYMENGSLDAFLR--KNDGRFTVIQLVGM 136
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
I + Y+ + V HRD+ +N+LVN + K+ DFG ++VL + +P +Y
Sbjct: 137 LRGIGSGMKYLSDMSAV-HRDLAARNILVNSNL-VCKVSDFGMSRVL-EDDPEAAYTTRG 193
Query: 121 -----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ APE I ++T+A D+WS G V+ E++
Sbjct: 194 GKIPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVM 228
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
+R + H NV++L + + T+ + L+LE V + + +S+ ++K
Sbjct: 69 LRQVLHHNVITLHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK- 122
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H T + H D+KP+N+++ N +KL DFG A + G +
Sbjct: 123 ---QILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L I V
Sbjct: 179 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV---- 233
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
++ + + F A D + +LL R T EAL
Sbjct: 234 ---------------------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272
Query: 237 HPF 239
HP+
Sbjct: 273 HPW 275
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR--- 120
I + Y+ N + HRD+ +N+LVN + K+ DFG ++VL + +P +Y S
Sbjct: 156 IAAGMKYLAN-MNYVHRDLAARNILVNSNL-VCKVSDFGLSRVL-EDDPEATYTTSGGKI 212
Query: 121 --YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ APE I ++T+A D+WS G V+ E++
Sbjct: 213 PIRWTAPEAI-SYRKFTSASDVWSFGIVMWEVM 244
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 104/261 (39%), Gaps = 48/261 (18%)
Query: 9 VVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY---VKLYFYQIC 65
+VSL + F + T+ L LV+ + R H Y + + P Y QI
Sbjct: 247 IVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPRAIFYTAQIV 299
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI-SYICSRYYRA 124
L ++H + +RD+KP+N+L++ + +++ D G A L G+ Y + + A
Sbjct: 300 SGLEHLHQR-NIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 125 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 184
PEL+ G EY ++D ++ G L E++ + F R E K
Sbjct: 358 PELLLG-EEYDFSVDYFALGVTLYEMIAARGPF------------------RARGE-KVE 397
Query: 185 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSP----NLRSTALEAL-IHPF 239
N + Q +P + P + D LLQ P R + + L HP
Sbjct: 398 NKELKQRVLEQAVTYP------DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPL 451
Query: 240 FDELRDPNTR-LPNGRFLPPL 259
F RD + R L G PP
Sbjct: 452 F---RDISWRQLEAGMLTPPF 469
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE-------PN 113
F QI A+ ++H+ G+ HRD+KP N+ +K+ DFG + + E P
Sbjct: 170 FIQIAEAVEFLHSK-GLMHRDLKPSNIFFT-MDDVVKVGDFGLVTAMDQDEEEQTVLTPM 227
Query: 114 ISY------ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+Y + ++ Y +PE I G Y+ +DI+S G +L ELL
Sbjct: 228 PAYATHXGQVGTKLYMSPEQIHG-NNYSHKVDIFSLGLILFELL 270
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 104/261 (39%), Gaps = 48/261 (18%)
Query: 9 VVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY---VKLYFYQIC 65
+VSL + F + T+ L LV+ + R H Y + + P Y QI
Sbjct: 247 IVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPRAIFYTAQIV 299
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI-SYICSRYYRA 124
L ++H + +RD+KP+N+L++ + +++ D G A L G+ Y + + A
Sbjct: 300 SGLEHLHQR-NIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 125 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 184
PEL+ G EY ++D ++ G L E++ + F R E K
Sbjct: 358 PELLLG-EEYDFSVDYFALGVTLYEMIAARGPF------------------RARGE-KVE 397
Query: 185 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSP----NLRSTALEAL-IHPF 239
N + Q +P + P + D LLQ P R + + L HP
Sbjct: 398 NKELKQRVLEQAVTYP------DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPL 451
Query: 240 FDELRDPNTR-LPNGRFLPPL 259
F RD + R L G PP
Sbjct: 452 F---RDISWRQLEAGMLTPPF 469
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 104/261 (39%), Gaps = 48/261 (18%)
Query: 9 VVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY---VKLYFYQIC 65
+VSL + F + T+ L LV+ + R H Y + + P Y QI
Sbjct: 247 IVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPRAIFYTAQIV 299
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI-SYICSRYYRA 124
L ++H + +RD+KP+N+L++ + +++ D G A L G+ Y + + A
Sbjct: 300 SGLEHLHQR-NIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 125 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 184
PEL+ G EY ++D ++ G L E++ + F R E K
Sbjct: 358 PELLLG-EEYDFSVDYFALGVTLYEMIAARGPF------------------RARGE-KVE 397
Query: 185 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSP----NLRSTALEAL-IHPF 239
N + Q +P + P + D LLQ P R + + L HP
Sbjct: 398 NKELKQRVLEQAVTYP------DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPL 451
Query: 240 FDELRDPNTR-LPNGRFLPPL 259
F RD + R L G PP
Sbjct: 452 F---RDISWRQLEAGMLTPPF 469
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
+R + H NV++L + + T+ + L+LE V + + +S+ ++K
Sbjct: 69 LRQVLHHNVITLHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK- 122
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H T + H D+KP+N+++ N +KL DFG A + G +
Sbjct: 123 ---QILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L I V
Sbjct: 179 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV---- 233
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
++ + + F A D + +LL R T EAL
Sbjct: 234 ---------------------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272
Query: 237 HPF 239
HP+
Sbjct: 273 HPW 275
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 40/243 (16%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
+R + H NV++L + + T+ + L+LE V + + +S+ ++K
Sbjct: 69 LRQVLHHNVITLHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK- 122
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISY 116
QI + Y+H T + H D+KP+N+++ N +KL DFG A + G +
Sbjct: 123 ---QILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 117 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 176
+ + APE++ D+WS G + LL G F G++ + L I V
Sbjct: 179 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV---- 233
Query: 177 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALI 236
++ + + F A D + +LL R T EAL
Sbjct: 234 ---------------------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272
Query: 237 HPF 239
HP+
Sbjct: 273 HPW 275
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 104/261 (39%), Gaps = 48/261 (18%)
Query: 9 VVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY---VKLYFYQIC 65
+VSL + F + T+ L LV+ + R H Y + + P Y QI
Sbjct: 247 IVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPRAIFYTAQIV 299
Query: 66 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI-SYICSRYYRA 124
L ++H + +RD+KP+N+L++ + +++ D G A L G+ Y + + A
Sbjct: 300 SGLEHLHQR-NIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 125 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 184
PEL+ G EY ++D ++ G L E++ + F R E K
Sbjct: 358 PELLLG-EEYDFSVDYFALGVTLYEMIAARGPF------------------RARGE-KVE 397
Query: 185 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSP----NLRSTALEAL-IHPF 239
N + Q +P + P + D LLQ P R + + L HP
Sbjct: 398 NKELKQRVLEQAVTYP------DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPL 451
Query: 240 FDELRDPNTR-LPNGRFLPPL 259
F RD + R L G PP
Sbjct: 452 F---RDISWRQLEAGMLTPPF 469
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 79/157 (50%), Gaps = 18/157 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
M DHPN++ L+ + L + +V EY+ ++ ++ H M L+ +
Sbjct: 104 MGQFDHPNIIRLE----GVVTRGRLAM-IVTEYMENGSLDTFLRTHDGQFTIMQLVGM-- 156
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
+ + Y+ + +G HRD+ +N+LV+ + K+ DFG ++VL + +P+ + +
Sbjct: 157 -LRGVGAGMRYLSD-LGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVL-EDDPDAAXTTT 212
Query: 120 R-----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ APE I T +++A D+WS G V+ E+L
Sbjct: 213 GGKIPIRWTAPEAIAFRT-FSSASDVWSFGVVMWEVL 248
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICS 119
Q R + Y+H + HRD+K N+ ++ + +K+ DFG A V + + + S
Sbjct: 116 QTARGMDYLHAK-SIIHRDLKSNNIFLH-EDNTVKIGDFGLATVKSRWSGSHQFEQLSGS 173
Query: 120 RYYRAPELIF--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ APE+I + Y+ D+++ G VL EL+ GQ + + DQ++E++
Sbjct: 174 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 226
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
M DHPNVV L+ + +V+E++ + ++ H + +I +
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKP-----VMIVIEFMENGALDAFLRKH---DGQFTVIQLVG 149
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
I + Y+ + +G HRD+ +N+LVN + K+ DFG ++V ++ +P Y +
Sbjct: 150 MLRGIAAGMRYLAD-MGYVHRDLAARNILVNSNL-VCKVSDFGLSRV-IEDDPEAVYTTT 206
Query: 120 R-----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ APE I ++T+A D+WS G V+ E++
Sbjct: 207 GGKIPVRWTAPEAI-QYRKFTSASDVWSYGIVMWEVM 242
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 16/156 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M DHPN++ L+ + ++ EY+ K R +I +
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKP-----VMIITEYMENGSLDAFLR--KNDGRFTVIQLVGM 121
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
I + Y+ + + HRD+ +N+LVN + K+ DFG ++VL + +P +Y
Sbjct: 122 LRGIGSGMKYLSD-MSYVHRDLAARNILVNSNL-VCKVSDFGMSRVL-EDDPEAAYTTRG 178
Query: 121 -----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ APE I ++T+A D+WS G V+ E++
Sbjct: 179 GKIPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVM 213
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 16/156 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M DHPN++ L+ + ++ EY+ K R +I +
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKP-----VMIITEYMENGSLDAFLR--KNDGRFTVIQLVGM 115
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
I + Y+ + + HRD+ +N+LVN + K+ DFG ++VL + +P +Y
Sbjct: 116 LRGIGSGMKYLSD-MSYVHRDLAARNILVNSNL-VCKVSDFGMSRVL-EDDPEAAYTTRG 172
Query: 121 -----YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ APE I ++T+A D+WS G V+ E++
Sbjct: 173 GKIPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVM 207
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA--KVLVKGEPNISYIC-S 119
Q R + Y+H + HRD+K N+ ++ + +K+ DFG A K G + S
Sbjct: 128 QTARGMDYLH-AKSIIHRDLKSNNIFLH-EDNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 120 RYYRAPELIF--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ APE+I + Y+ D+++ G VL EL+ GQ + + DQ++E++
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA--KVLVKGEPNISYIC-S 119
Q R + Y+H + HRD+K N+ ++ + +K+ DFG A K G + S
Sbjct: 128 QTARGMDYLHAK-SIIHRDLKSNNIFLH-EDNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 120 RYYRAPELIF--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ APE+I + Y+ D+++ G VL EL+ GQ + + DQ++E++
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 78 CHRDIKPQNLLVNPHTHQLKLCDFG--SAKVLVKGEPNISYICSRYYRAPELIFGATEYT 135
HRD+KP+N+LV+ L DFG SA K + + + YY APE F + T
Sbjct: 156 THRDVKPENILVSADDFAY-LVDFGIASATTDEKLTQLGNTVGTLYYXAPER-FSESHAT 213
Query: 136 AAIDIWSAGCVLAELLLGQPLFPGE 160
DI++ CVL E L G P + G+
Sbjct: 214 YRADIYALTCVLYECLTGSPPYQGD 238
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIK---HHYKMSQRMPLIY 56
++ L+H N+V L TT + ++ L++E+ P +++ V++ + Y + + LI
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKV---LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIV 117
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLL--VNPHTHQL-KLCDFGSAKVLVKGEPN 113
++ + + ++ G+ HR+IKP N++ + + KL DFG+A+ L E
Sbjct: 118 LR----DVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF 172
Query: 114 ISYICSRYYRAPELIFGAT-------EYTAAIDIWSAGCVLAELLLGQ-PLFPGES 161
+S + Y P++ A +Y A +D+WS G G P P E
Sbjct: 173 VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
+ +QI + + Y+ + + HRD+ +N+LV ++K+ DFG ++ + + + +
Sbjct: 155 FAWQISQGMQYLAE-MSLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSXVKRSQG 212
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 159
R + A E +F YT D+WS G +L E++ LG +PG
Sbjct: 213 RIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY- 121
Q+ + +A++ + HRD+ +N+L+ + H K+ DFG A+ ++ I +R
Sbjct: 168 QVAQGMAFLASK-NCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 122 --YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 159
+ APE IF YT D+WS G +L E+ LG +PG
Sbjct: 226 VKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 265
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY- 121
Q+ + +A++ + HRD+ +N+L+ + H K+ DFG A+ ++ I +R
Sbjct: 172 QVAQGMAFLASK-NCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 122 --YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 159
+ APE IF YT D+WS G +L E+ LG +PG
Sbjct: 230 VKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY- 121
Q+ + +A++ + HRD+ +N+L+ + H K+ DFG A+ ++ I +R
Sbjct: 174 QVAQGMAFLASK-NCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLP 231
Query: 122 --YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 159
+ APE IF YT D+WS G +L E+ LG +PG
Sbjct: 232 VKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 271
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ L HPN+V F L++V EY+ + H +++
Sbjct: 88 MKRLRHPNIV-----LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSM 142
Query: 61 FYQICRALAYIHN-TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y + + + Y+HN + HRD+K NLLV+ + +K+CDFG +++ ++ S
Sbjct: 143 AYDVAKGMNYLHNRNPPIVHRDLKSPNLLVD-KKYTVKVCDFGLSRLKAS-----XFLXS 196
Query: 120 RY------YRAPELIFGATEYTAAIDIWSAGCVLAEL-LLGQP 155
+ + APE++ + D++S G +L EL L QP
Sbjct: 197 KXAAGTPEWMAPEVLRDEPSNEKS-DVYSFGVILWELATLQQP 238
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY- 121
Q+ + +A++ + HRD+ +N+L+ + H K+ DFG A+ ++ I +R
Sbjct: 160 QVAQGMAFLASK-NCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 122 --YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 159
+ APE IF YT D+WS G +L E+ LG +PG
Sbjct: 218 VKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 257
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY- 121
Q+ + +A++ + HRD+ +N+L+ + H K+ DFG A+ ++ I +R
Sbjct: 172 QVAQGMAFLASK-NCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 122 --YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 159
+ APE IF YT D+WS G +L E+ LG +PG
Sbjct: 230 VKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY- 121
Q+ + +A++ + HRD+ +N+L+ + H K+ DFG A+ ++ I +R
Sbjct: 166 QVAQGMAFLASK-NCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLP 223
Query: 122 --YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 159
+ APE IF YT D+WS G +L E+ LG +PG
Sbjct: 224 VKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 263
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
+ +QI + + Y+ + + HRD+ +N+LV ++K+ DFG ++ + + + +
Sbjct: 155 FAWQISQGMQYLAE-MKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSXVKRSQG 212
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 159
R + A E +F YT D+WS G +L E++ LG +PG
Sbjct: 213 RIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ L HPN+V F L++V EY+ + H +++
Sbjct: 88 MKRLRHPNIV-----LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSM 142
Query: 61 FYQICRALAYIHN-TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
Y + + + Y+HN + HR++K NLLV+ + +K+CDFG +++ +++ S
Sbjct: 143 AYDVAKGMNYLHNRNPPIVHRNLKSPNLLVD-KKYTVKVCDFGLSRLKAS-----TFLSS 196
Query: 120 RY------YRAPELIFGATEYTAAIDIWSAGCVLAEL-LLGQP 155
+ + APE++ + D++S G +L EL L QP
Sbjct: 197 KSAAGTPEWMAPEVLRDEPSNEKS-DVYSFGVILWELATLQQP 238
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 46/211 (21%)
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI--- 114
K Y+ + A+ IH G+ H D+KP N L+ LKL DFG A + ++
Sbjct: 130 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 186
Query: 115 SYICSRYYRAPELIFGATE----------YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 164
S + + Y PE I + + D+WS GC+L + G+ F
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ------ 240
Query: 165 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEA--VDLVSRLLQ 222
Q++ I L ++PN+ E +FP I PE D++ L+
Sbjct: 241 QIINQISKLHA-------IIDPNH-EIEFPDI--------------PEKDLQDVLKCCLK 278
Query: 223 YSPNLRSTALEALIHPFFDELRDPNTRLPNG 253
P R + E L HP+ P ++ G
Sbjct: 279 RDPKQRISIPELLAHPYVQIQTHPVNQMAKG 309
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 46/211 (21%)
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI--- 114
K Y+ + A+ IH G+ H D+KP N L+ LKL DFG A + ++
Sbjct: 114 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKD 170
Query: 115 SYICSRYYRAPELIFGATE----------YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 164
S + + Y PE I + + D+WS GC+L + G+ F
Sbjct: 171 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 224
Query: 165 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEA--VDLVSRLLQ 222
Q++ I L ++PN+ E +FP I PE D++ L+
Sbjct: 225 QIINQISKLHA-------IIDPNH-EIEFPDI--------------PEKDLQDVLKCCLK 262
Query: 223 YSPNLRSTALEALIHPFFDELRDPNTRLPNG 253
P R + E L HP+ P ++ G
Sbjct: 263 RDPKQRISIPELLAHPYVQIQTHPVNQMAKG 293
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 46/211 (21%)
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI--- 114
K Y+ + A+ IH G+ H D+KP N L+ LKL DFG A + ++
Sbjct: 111 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 167
Query: 115 SYICSRYYRAPELIFGATE----------YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 164
S + + Y PE I + + D+WS GC+L + G+ F
Sbjct: 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 221
Query: 165 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEA--VDLVSRLLQ 222
Q++ I L ++PN+ E +FP I PE D++ L+
Sbjct: 222 QIINQISKLHA-------IIDPNH-EIEFPDI--------------PEKDLQDVLKCCLK 259
Query: 223 YSPNLRSTALEALIHPFFDELRDPNTRLPNG 253
P R + E L HP+ P ++ G
Sbjct: 260 RDPKQRISIPELLAHPYVQIQTHPVNQMAKG 290
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 46/211 (21%)
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI--- 114
K Y+ + A+ IH G+ H D+KP N L+ LKL DFG A + ++
Sbjct: 110 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 166
Query: 115 SYICSRYYRAPELIFGATE----------YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 164
S + + Y PE I + + D+WS GC+L + G+ F
Sbjct: 167 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 220
Query: 165 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEA--VDLVSRLLQ 222
Q++ I L ++PN+ E +FP I PE D++ L+
Sbjct: 221 QIINQISKLHA-------IIDPNH-EIEFPDI--------------PEKDLQDVLKCCLK 258
Query: 223 YSPNLRSTALEALIHPFFDELRDPNTRLPNG 253
P R + E L HP+ P ++ G
Sbjct: 259 RDPKQRISIPELLAHPYVQIQTHPVNQMAKG 289
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 39/223 (17%)
Query: 3 LLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHH---YKMSQRMPLIYVK 58
L++H N+ T + LV+EY P ++ + + H + S R+
Sbjct: 63 LMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLA----- 117
Query: 59 LYFYQICRALAYIHNTI--------GVCHRDIKPQNLLVNPHTHQLKLCDFG-----SAK 105
+ + R LAY+H + + HRD+ +N+LV + + DFG +
Sbjct: 118 ---HSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVK-NDGTCVISDFGLSMRLTGN 173
Query: 106 VLVK-GEPN---ISYICSRYYRAPELIFGATEYT------AAIDIWSAGCVLAELLLG-Q 154
LV+ GE + IS + + Y APE++ GA +D+++ G + E+ +
Sbjct: 174 RLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT 233
Query: 155 PLFPGESGVD-QLVEIIKVLGTPTREEIKCMNPNYTEF-KFPQ 195
LFPGES + Q+ +V PT E+++ + + KFP+
Sbjct: 234 DLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPE 276
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 46/211 (21%)
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI--- 114
K Y+ + A+ IH G+ H D+KP N L+ LKL DFG A + ++
Sbjct: 158 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 214
Query: 115 SYICSRYYRAPELIFGATE----------YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 164
S + + Y PE I + + D+WS GC+L + G+ F
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ------ 268
Query: 165 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEA--VDLVSRLLQ 222
Q++ I L ++PN+ E +FP I PE D++ L+
Sbjct: 269 QIINQISKLHA-------IIDPNH-EIEFPDI--------------PEKDLQDVLKCCLK 306
Query: 223 YSPNLRSTALEALIHPFFDELRDPNTRLPNG 253
P R + E L HP+ P ++ G
Sbjct: 307 RDPKQRISIPELLAHPYVQIQTHPVNQMAKG 337
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKL 59
M DHPNV+ L+ +T + ++ E++ ++ ++ + + +I +
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTP-----VMIITEFMENGSLDSFLRQN---DGQFTVIQLVG 139
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
I + Y+ + + HRD+ +N+LVN + K+ DFG ++ L + +Y +
Sbjct: 140 MLRGIAAGMKYLAD-MNYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSA 197
Query: 120 R------YYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ APE I ++T+A D+WS G V+ E++
Sbjct: 198 LGGKIPIRWTAPEAI-QYRKFTSASDVWSYGIVMWEVM 234
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
+ +QI + + Y+ + + HRD+ +N+LV ++K+ DFG ++ + + + +
Sbjct: 155 FAWQISQGMQYLAE-MKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSYVKRSQG 212
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 159
R + A E +F YT D+WS G +L E++ LG +PG
Sbjct: 213 RIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 46/211 (21%)
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI--- 114
K Y+ + A+ IH G+ H D+KP N L+ LKL DFG A + ++
Sbjct: 158 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 214
Query: 115 SYICSRYYRAPELIFGATE----------YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 164
S + + Y PE I + + D+WS GC+L + G+ F
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ------ 268
Query: 165 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEA--VDLVSRLLQ 222
Q++ I L ++PN+ E +FP I PE D++ L+
Sbjct: 269 QIINQISKLHA-------IIDPNH-EIEFPDI--------------PEKDLQDVLKCCLK 306
Query: 223 YSPNLRSTALEALIHPFFDELRDPNTRLPNG 253
P R + E L HP+ P ++ G
Sbjct: 307 RDPKQRISIPELLAHPYVQIQTHPVNQMAKG 337
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 46/211 (21%)
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI--- 114
K Y+ + A+ IH G+ H D+KP N L+ LKL DFG A + ++
Sbjct: 158 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 214
Query: 115 SYICSRYYRAPELIFGATE----------YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 164
S + + Y PE I + + D+WS GC+L + G+ F
Sbjct: 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ------ 268
Query: 165 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEA--VDLVSRLLQ 222
Q++ I L ++PN+ E +FP I PE D++ L+
Sbjct: 269 QIINQISKLHA-------IIDPNH-EIEFPDI--------------PEKDLQDVLKCCLK 306
Query: 223 YSPNLRSTALEALIHPFFDELRDPNTRLPNG 253
P R + E L HP+ P ++ G
Sbjct: 307 RDPKQRISIPELLAHPYVQIQTHPVNQMAKG 337
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 82/211 (38%), Gaps = 46/211 (21%)
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI--- 114
K Y+ + A+ IH G+ H D+KP N L+ LKL DFG A + +
Sbjct: 130 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDXXXVVKD 186
Query: 115 SYICSRYYRAPELIFGATE----------YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 164
S + + Y PE I + + D+WS GC+L + G+ F
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ------ 240
Query: 165 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEA--VDLVSRLLQ 222
Q++ I L ++PN+ E +FP I PE D++ L+
Sbjct: 241 QIINQISKLHA-------IIDPNH-EIEFPDI--------------PEKDLQDVLKCCLK 278
Query: 223 YSPNLRSTALEALIHPFFDELRDPNTRLPNG 253
P R + E L HP+ P ++ G
Sbjct: 279 RDPKQRISIPELLAHPYVQIQTHPVNQMAKG 309
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIK---HHYKMSQRMPLIY 56
++ L+H N+V L TT + ++ L++E+ P +++ V++ + Y + + LI
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKV---LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIV 117
Query: 57 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLL--VNPHTHQL-KLCDFGSAKVLVKGEPN 113
++ + + ++ G+ HR+IKP N++ + + KL DFG+A+ L E
Sbjct: 118 LR----DVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF 172
Query: 114 ISYICSRYYRAPELIFGAT-------EYTAAIDIWSAGCVLAELLLGQ-PLFPGES 161
+ + Y P++ A +Y A +D+WS G G P P E
Sbjct: 173 VXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 21/105 (20%)
Query: 64 ICRALAYIHNTI---------GVCHRDIKPQNLLVNPHTHQLKLC--DFGSAKVLVKGEP 112
+ R LAY+H I + HRDIK +N+L+ + L C DFG A G+
Sbjct: 130 MARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLK---NNLTACIADFGLALKFEAGKS 186
Query: 113 ---NISYICSRYYRAPELIFGATEYTAA----IDIWSAGCVLAEL 150
+ +R Y APE++ GA + ID+++ G VL EL
Sbjct: 187 AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M +DHP++V L S T + LV + +P H +K + L+ +
Sbjct: 71 MASMDHPHLVRLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN--W 122
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
QI + + Y+ + HRD+ +N+LV H +K+ DFG A++L E + +
Sbjct: 123 CVQIAKGMMYLEER-RLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYNADGGK 180
Query: 121 Y---YRAPELIFGATEYTAAIDIWSAGCVLAELLL--GQP 155
+ A E I ++T D+WS G + EL+ G+P
Sbjct: 181 MPIKWMALECIH-YRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M +DHP++V L S T + LV + +P H +K + L+ +
Sbjct: 94 MASMDHPHLVRLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN--W 145
Query: 61 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 120
QI + + Y+ + HRD+ +N+LV H +K+ DFG A++L E + +
Sbjct: 146 CVQIAKGMMYLEER-RLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYNADGGK 203
Query: 121 Y---YRAPELIFGATEYTAAIDIWSAGCVLAELLL--GQP 155
+ A E I ++T D+WS G + EL+ G+P
Sbjct: 204 MPIKWMALECIH-YRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 79 HRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI---SYICSRYYRAPELIFGATEYT 135
HRDIK N+L++ K+ DFG A+ K + + + Y APE + G E T
Sbjct: 156 HRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG--EIT 212
Query: 136 AAIDIWSAGCVLAELLLGQP 155
DI+S G VL E++ G P
Sbjct: 213 PKSDIYSFGVVLLEIITGLP 232
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 79 HRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI---SYICSRYYRAPELIFGATEYT 135
HRDIK N+L++ K+ DFG A+ K + + + Y APE + G E T
Sbjct: 156 HRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG--EIT 212
Query: 136 AAIDIWSAGCVLAELLLGQP 155
DI+S G VL E++ G P
Sbjct: 213 PKSDIYSFGVVLLEIITGLP 232
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
MR L+HPNV++L + L P H + + QR P + +
Sbjct: 76 MRGLNHPNVLALIGIMLPPEGLPHVLL-------PYMCHGDLLQFIRSPQRNPTVKDLIS 128
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ R + Y+ V HRD+ +N +++ + +K+ DFG A+ ++ E S
Sbjct: 129 FGLQVARGMEYLAEQKFV-HRDLAARNCMLD-ESFTVKVADFGLARDILDRE-YYSVQQH 185
Query: 120 RYYRAPELIFGATE------YTAAIDIWSAGCVLAELL 151
R+ R P + + A E +T D+WS G +L ELL
Sbjct: 186 RHARLP-VKWTALESLQTYRFTTKSDVWSFGVLLWELL 222
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 20/154 (12%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYF 61
LDH ++V L ++ L LV +Y+P + V +H + ++ L +
Sbjct: 90 LDHAHIVRLLGLCPGSS------LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW----G 139
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 121
QI + + Y+ G+ HR++ +N+L+ + Q+++ DFG A +L + + Y ++
Sbjct: 140 VQIAKGMYYLEEH-GMVHRNLAARNVLLKSPS-QVQVADFGVADLLPPDDKQLLYSEAKT 197
Query: 122 ---YRAPELI-FGATEYTAAIDIWSAGCVLAELL 151
+ A E I FG +YT D+WS G + EL+
Sbjct: 198 PIKWMALESIHFG--KYTHQSDVWSYGVTVWELM 229
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 79 HRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI---SYICSRYYRAPELIFGATEYT 135
HRDIK N+L++ K+ DFG A+ K + + + Y APE + G E T
Sbjct: 150 HRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG--EIT 206
Query: 136 AAIDIWSAGCVLAELLLGQP 155
DI+S G VL E++ G P
Sbjct: 207 PKSDIYSFGVVLLEIITGLP 226
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 79 HRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYT 135
HRDIK N+L++ K+ DFG A+ K + + + Y APE + G E T
Sbjct: 147 HRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG--EIT 203
Query: 136 AAIDIWSAGCVLAELLLGQP 155
DI+S G VL E++ G P
Sbjct: 204 PKSDIYSFGVVLLEIITGLP 223
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 20/154 (12%)
Query: 4 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYF 61
LDH ++V L ++ L LV +Y+P + V +H + ++ L +
Sbjct: 72 LDHAHIVRLLGLCPGSS------LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW----G 121
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 121
QI + + Y+ G+ HR++ +N+L+ + Q+++ DFG A +L + + Y ++
Sbjct: 122 VQIAKGMYYLEEH-GMVHRNLAARNVLLKSPS-QVQVADFGVADLLPPDDKQLLYSEAKT 179
Query: 122 ---YRAPELI-FGATEYTAAIDIWSAGCVLAELL 151
+ A E I FG +YT D+WS G + EL+
Sbjct: 180 PIKWMALESIHFG--KYTHQSDVWSYGVTVWELM 211
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 79 HRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR------YYRAPELIFGAT 132
HRD+ +N+LVN + K+ DFG ++ L + + +Y S + APE I
Sbjct: 139 HRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI-AFR 196
Query: 133 EYTAAIDIWSAGCVLAELL 151
++T+A D WS G V+ E++
Sbjct: 197 KFTSASDAWSYGIVMWEVM 215
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 41/191 (21%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE---PNISYICS 119
+I +AY+ N HRD+ +N +V H +K+ DFG + + + + +
Sbjct: 138 EIADGMAYL-NAKKFVHRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPTR 178
+ APE + +T + D+WS G VL E+ L + + G S +Q+++ +
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFV-------- 245
Query: 179 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEAL--- 235
M+ Y + P P DL+ Q++PN+R T LE +
Sbjct: 246 -----MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
Query: 236 ---IHPFFDEL 243
+HP F E+
Sbjct: 287 KDDLHPSFPEV 297
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICS 119
Q + + Y+H + HRD+K N+ ++ +K+ DFG A V + + + S
Sbjct: 139 QTAQGMDYLHAK-SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGS 196
Query: 120 RYYRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ APE+I + Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 197 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 249
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICS 119
Q + + Y+H + HRD+K N+ ++ +K+ DFG A V + + + S
Sbjct: 114 QTAQGMDYLHAK-SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGS 171
Query: 120 RYYRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ APE+I + Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 172 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 224
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICS 119
Q + + Y+H + HRD+K N+ ++ +K+ DFG A V + + + S
Sbjct: 117 QTAQGMDYLHAK-SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGS 174
Query: 120 RYYRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ APE+I + Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICS 119
Q + + Y+H + HRD+K N+ ++ +K+ DFG A V + + + S
Sbjct: 112 QTAQGMDYLHAK-SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGS 169
Query: 120 RYYRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ APE+I + Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICS 119
Q + + Y+H + HRD+K N+ ++ +K+ DFG A V + + + S
Sbjct: 112 QTAQGMDYLHAK-SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGS 169
Query: 120 RYYRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ APE+I + Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
++ L HPN+V + ST K + + LV E + +K+ + + ++ +
Sbjct: 79 LKGLQHPNIVRFYDSWESTV-KGKKCIVLVTELXTSGTLKTYLKRFKVXK---IKVLRSW 134
Query: 61 FYQICRALAYIHN-TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
QI + L ++H T + HRD+K N+ + T +K+ D G A L + + I +
Sbjct: 135 CRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA-TLKRASFAKAVIGT 193
Query: 120 RYYRAPELIFGATEYTAAIDIWSAG-CVL 147
+ APE +Y ++D+++ G C L
Sbjct: 194 PEFXAPEXY--EEKYDESVDVYAFGXCXL 220
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICS 119
Q + + Y+H + HRD+K N+ ++ +K+ DFG A V + + + S
Sbjct: 140 QTAQGMDYLHAK-SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGS 197
Query: 120 RYYRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ APE+I + Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICS 119
Q + + Y+H + HRD+K N+ ++ +K+ DFG A V + + + S
Sbjct: 117 QTAQGMDYLHAK-SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGS 174
Query: 120 RYYRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ APE+I + Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVK 58
M +D+P+V L ++T + L+++ +P + V +H + + Y+
Sbjct: 72 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGXLLDYVREHKDNIGSQ----YLL 121
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 122 NWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEG 179
Query: 119 SRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 180 GKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 214
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 65 CRALAYIHNTIG--VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY- 121
R LAY+H+ + HRD+K N+L++ + + DFG AK++ + ++
Sbjct: 149 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGTI 207
Query: 122 -YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
+ APE + + + D++ G +L EL+ GQ F
Sbjct: 208 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPET--VHRVIKHHYKMSQRMPLIYVK 58
M +D+P+V L ++T + L+++ +P + V +H + + Y+
Sbjct: 73 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLL 122
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 123 NWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEG 180
Query: 119 SRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 181 GKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 60 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
+ QI + ++Y+ + + + HRD+ +N+LV H +K+ DFG A++L E
Sbjct: 124 WCMQIAKGMSYLED-VRLVHRDLAARNVLVKSPNH-VKITDFGLARLLDIDETEYHADGG 181
Query: 120 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I +T D+WS G + EL+
Sbjct: 182 KVPIKWMALESIL-RRRFTHQSDVWSYGVTVWELM 215
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA--KVLVKGEPNISYIC-S 119
Q + + Y+H + HRD+K N+ ++ +K+ DFG A K G + S
Sbjct: 132 QTAQGMDYLHAK-SIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGS 189
Query: 120 RYYRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ APE+I + Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 190 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 242
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPET--VHRVIKHHYKMSQRMPLIYVK 58
M +D+P+V L ++T + L+++ +P + V +H + + Y+
Sbjct: 73 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLL 122
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 123 NWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEG 180
Query: 119 SRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 181 GKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 1 MRLLDHPNVVSLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
M +D+P+V L C ST + + +L+YV E H + + Y+
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YL 121
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 122 LNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAE 179
Query: 118 CSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 180 GGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 1 MRLLDHPNVVSLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
M +D+P+V L C ST + + +L+YV E H + + Y+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YL 119
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 120 LNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAE 177
Query: 118 CSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 178 GGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 1 MRLLDHPNVVSLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
M +D+P+V L C ST + + +L+YV E H + + Y+
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YL 126
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 127 LNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAE 184
Query: 118 CSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 185 GGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA--KVLVKGEPNISYIC-S 119
Q + + Y+H + HRD+K N+ ++ +K+ DFG A K G + S
Sbjct: 140 QTAQGMDYLHAK-SIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGS 197
Query: 120 RYYRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ APE+I + Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 56 YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS 115
Y+ + QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 122 YLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYH 179
Query: 116 YICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 180 AEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 217
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA--KVLVKGEPNISYIC-S 119
Q + + Y+H + HRD+K N+ ++ +K+ DFG A K G + S
Sbjct: 112 QTAQGMDYLHAK-SIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGS 169
Query: 120 RYYRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ APE+I + Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 65 CRALAYIHNTIG--VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY- 121
R LAY+H+ + HRD+K N+L++ + + DFG AK++ + ++
Sbjct: 141 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGXI 199
Query: 122 -YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 157
+ APE + + + D++ G +L EL+ GQ F
Sbjct: 200 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ HPNV+SL + E +VL Y+ H +++ + P + +
Sbjct: 84 MKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIG 136
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E + +
Sbjct: 137 FGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEXXSVHNKT 194
Query: 120 RY-----YRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVL 173
+ A E + ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 195 GAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--- 250
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 251 -----QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 290
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 33/230 (14%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ HPNV+SL + E +VL Y+ H +++ + P + +
Sbjct: 77 MKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIG 129
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E Y
Sbjct: 130 FGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSV 183
Query: 120 RYYRAPEL--------IFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEII 170
+L ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 184 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 243
Query: 171 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 244 --------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 283
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 33/230 (14%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ HPNV+SL + E +VL Y+ H +++ + P + +
Sbjct: 104 MKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIG 156
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E Y
Sbjct: 157 FGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSV 210
Query: 120 RYYRAPEL--------IFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEII 170
+L ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 211 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 270
Query: 171 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 271 --------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 310
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 33/230 (14%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ HPNV+SL + E +VL Y+ H +++ + P + +
Sbjct: 82 MKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIG 134
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E Y
Sbjct: 135 FGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSV 188
Query: 120 RYYRAPEL--------IFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEII 170
+L ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 248
Query: 171 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 249 --------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 288
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 33/230 (14%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ HPNV+SL + E +VL Y+ H +++ + P + +
Sbjct: 85 MKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIG 137
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E Y
Sbjct: 138 FGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSV 191
Query: 120 RYYRAPEL--------IFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEII 170
+L ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 251
Query: 171 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 252 --------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 33/230 (14%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ HPNV+SL + E +VL Y+ H +++ + P + +
Sbjct: 80 MKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIG 132
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E Y
Sbjct: 133 FGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSV 186
Query: 120 RYYRAPEL--------IFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEII 170
+L ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 187 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 246
Query: 171 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 247 --------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 286
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 33/230 (14%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ HPNV+SL + E +VL Y+ H +++ + P + +
Sbjct: 103 MKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIG 155
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E Y
Sbjct: 156 FGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSV 209
Query: 120 RYYRAPEL--------IFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEII 170
+L ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 210 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 269
Query: 171 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 270 --------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 309
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 33/230 (14%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ HPNV+SL + E +VL Y+ H +++ + P + +
Sbjct: 83 MKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIG 135
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E Y
Sbjct: 136 FGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSV 189
Query: 120 RYYRAPEL--------IFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEII 170
+L ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 190 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 249
Query: 171 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 250 --------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 289
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 1 MRLLDHPNVVSLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
M +D+P+V L C ST + + +L+YV E H + + Y+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVRE-------HKDNIGSQ----YL 119
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 120 LNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAE 177
Query: 118 CSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 178 GGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 56 YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS 115
Y+ + QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 152 YLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYH 209
Query: 116 YICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 210 AEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 247
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 33/230 (14%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ HPNV+SL + E +VL Y+ H +++ + P + +
Sbjct: 84 MKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIG 136
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E Y
Sbjct: 137 FGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSV 190
Query: 120 RYYRAPEL--------IFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEII 170
+L ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 191 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 250
Query: 171 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 251 --------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 290
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 56 YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS 115
Y+ + QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 128 YLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYH 185
Query: 116 YICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 186 AEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 223
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 33/230 (14%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ HPNV+SL + E +VL Y+ H +++ + P + +
Sbjct: 85 MKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIG 137
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E Y
Sbjct: 138 FGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSV 191
Query: 120 RYYRAPEL--------IFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEII 170
+L ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 251
Query: 171 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 252 --------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 100/227 (44%), Gaps = 27/227 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ HPNV+SL + E +VL Y+ H +++ + P + +
Sbjct: 86 MKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIG 138
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ + + ++ + V HRD+ +N +++ +K+ DFG A+ ++ E + + +
Sbjct: 139 FGLQVAKGMKFLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMLDKEFDSVHNKT 196
Query: 120 RY-----YRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVL 173
+ A E + ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 197 GAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--- 252
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 253 -----QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 292
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 59/200 (29%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
+I +AY+ N HR++ +N +V H +K+ DFG + + + + YY
Sbjct: 139 EIADGMAYL-NAKKFVHRNLAARNCMV-AHDFTVKIGDFGMTRDIYE---------TDYY 187
Query: 123 R------------APELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEI 169
R APE + +T + D+WS G VL E+ L + + G S +Q+++
Sbjct: 188 RKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKF 245
Query: 170 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRS 229
+ M+ Y + P P DL+ Q++PN+R
Sbjct: 246 V-------------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPNMRP 278
Query: 230 TALEAL------IHPFFDEL 243
T LE + +HP F E+
Sbjct: 279 TFLEIVNLLKDDLHPSFPEV 298
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPET--VHRVIKHHYKMSQRMPLIYVK 58
M +D+P+V L ++T + L+++ +P + V +H + + Y+
Sbjct: 71 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLL 120
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 121 NWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEG 178
Query: 119 SRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 179 GKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 59/200 (29%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
+I +AY+ N HR++ +N +V H +K+ DFG + + + + YY
Sbjct: 138 EIADGMAYL-NAKKFVHRNLAARNCMV-AHDFTVKIGDFGMTRDIYE---------TDYY 186
Query: 123 R------------APELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEI 169
R APE + +T + D+WS G VL E+ L + + G S +Q+++
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKF 244
Query: 170 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRS 229
+ M+ Y + P P DL+ Q++PN+R
Sbjct: 245 V-------------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPNMRP 277
Query: 230 TALEAL------IHPFFDEL 243
T LE + +HP F E+
Sbjct: 278 TFLEIVNLLKDDLHPSFPEV 297
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 1 MRLLDHPNVVSLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
M +D+P+V L C ST + + +L+YV E H + + Y+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YL 119
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 120 LNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAE 177
Query: 118 CSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 178 GGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPET--VHRVIKHHYKMSQRMPLIYVK 58
M +D+P+V L ++T + L+++ +P + V +H + + Y+
Sbjct: 75 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLL 124
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 125 NWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEG 182
Query: 119 SRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 183 GKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPET--VHRVIKHHYKMSQRMPLIYVK 58
M +D+P+V L ++T + L+++ +P + V +H + + Y+
Sbjct: 72 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLL 121
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 122 NWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEG 179
Query: 119 SRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 180 GKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 1 MRLLDHPNVVSLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
M +D+P+V L C ST + + +L+YV E H + + Y+
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YL 126
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 127 LNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAE 184
Query: 118 CSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 185 GGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 1 MRLLDHPNVVSLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
M +D+P+V L C ST + + +L+YV E H + + Y+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YL 119
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 120 LNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAE 177
Query: 118 CSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 178 GGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPET--VHRVIKHHYKMSQRMPLIYVK 58
M +D+P+V L ++T + L+++ +P + V +H + + Y+
Sbjct: 74 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLL 123
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 124 NWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEG 181
Query: 119 SRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 182 GKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPET--VHRVIKHHYKMSQRMPLIYVK 58
M +D+P+V L ++T + L+++ +P + V +H + + Y+
Sbjct: 73 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLL 122
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 123 NWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEG 180
Query: 119 SRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 181 GKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 1 MRLLDHPNVVSLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
M +D+P+V L C ST + + +L+YV E H + + Y+
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YL 121
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 122 LNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAE 179
Query: 118 CSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 180 GGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 1 MRLLDHPNVVSLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
M +D+P+V L C ST + + +L+YV E H + + Y+
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YL 122
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 123 LNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAE 180
Query: 118 CSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 181 GGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 1 MRLLDHPNVVSLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
M +D+P+V L C ST + + +L+YV E H + + Y+
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YL 126
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 127 LNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAE 184
Query: 118 CSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 185 GGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 1 MRLLDHPNVVSLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
M +D+P+V L C ST + + +L+YV E H + + Y+
Sbjct: 96 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YL 144
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 145 LNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAE 202
Query: 118 CSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 203 GGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 238
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 1 MRLLDHPNVVSLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
M +D+P+V L C ST + + +L+YV E H + + Y+
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YL 122
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 123 LNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAE 180
Query: 118 CSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 181 GGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 1 MRLLDHPNVVSLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
M +D+P+V L C ST + + +L+YV E H + + Y+
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YL 122
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 123 LNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAE 180
Query: 118 CSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 181 GGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPET--VHRVIKHHYKMSQRMPLIYVK 58
M +D+P+V L ++T + L+++ +P + V +H + + Y+
Sbjct: 78 MASVDNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLL 127
Query: 59 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 118
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 128 NWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEG 185
Query: 119 SRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 186 GKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 1 MRLLDHPNVVSLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
M +D+P+V L C ST + + +L+YV E H + + Y+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YL 119
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 120 LNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAE 177
Query: 118 CSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 178 GGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 1 MRLLDHPNVVSLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
M +D+P+V L C ST + + +L+YV E H + + Y+
Sbjct: 77 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YL 125
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 126 LNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAE 183
Query: 118 CSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 184 GGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 219
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVK--GEPNISY-ICS 119
Q + + Y+H + HRD+K N+ ++ +K+ DFG A V + G + S
Sbjct: 140 QTAQGMDYLHAK-NIIHRDMKSNNIFLHEGL-TVKIGDFGLATVKSRWSGSQQVEQPTGS 197
Query: 120 RYYRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 170
+ APE+I ++ D++S G VL EL+ G+ + + DQ++ ++
Sbjct: 198 VLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV 250
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 56 YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS 115
Y+ + QI + + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 112 YLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYH 169
Query: 116 YICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 170 AEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 207
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 27/227 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ HPNV+SL + E +VL Y+ H +++ + P + +
Sbjct: 85 MKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIG 137
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ + + ++ + V HRD+ +N +++ +K+ DFG A+ + E + + +
Sbjct: 138 FGLQVAKGMKFLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKT 195
Query: 120 RY-----YRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVL 173
+ A E + ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 196 GAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--- 251
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 252 -----QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 27/227 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ HPNV+SL + E +VL Y+ H +++ + P + +
Sbjct: 144 MKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIG 196
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ + + ++ + V HRD+ +N +++ +K+ DFG A+ + E + + +
Sbjct: 197 FGLQVAKGMKFLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKT 254
Query: 120 RY-----YRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVL 173
+ A E + ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 255 GAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--- 310
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 311 -----QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 350
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 27/227 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ HPNV+SL + E +VL Y+ H +++ + P + +
Sbjct: 83 MKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIG 135
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ + + ++ + V HRD+ +N +++ +K+ DFG A+ + E + + +
Sbjct: 136 FGLQVAKGMKFLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKT 193
Query: 120 RY-----YRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVL 173
+ A E + ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 194 GAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--- 249
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 250 -----QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 289
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 27/227 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ HPNV+SL + E +VL Y+ H +++ + P + +
Sbjct: 85 MKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIG 137
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ + + ++ + V HRD+ +N +++ +K+ DFG A+ + E + + +
Sbjct: 138 FGLQVAKGMKFLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKT 195
Query: 120 RY-----YRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVL 173
+ A E + ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 196 GAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--- 251
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 252 -----QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 27/227 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ HPNV+SL + E +VL Y+ H +++ + P + +
Sbjct: 90 MKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIG 142
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ + + ++ + V HRD+ +N +++ +K+ DFG A+ + E + + +
Sbjct: 143 FGLQVAKGMKFLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKT 200
Query: 120 RY-----YRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVL 173
+ A E + ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 201 GAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--- 256
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 257 -----QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 296
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 79 HRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR------YYRAPELIFGAT 132
HRD+ +N+LVN + K+ DFG ++ L + + + S + APE I
Sbjct: 141 HRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI-AFR 198
Query: 133 EYTAAIDIWSAGCVLAELL 151
++T+A D WS G V+ E++
Sbjct: 199 KFTSASDAWSYGIVMWEVM 217
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 27/227 (11%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 60
M+ HPNV+SL + E +VL Y+ H +++ + P + +
Sbjct: 86 MKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIG 138
Query: 61 F-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 119
F Q+ + + ++ + V HRD+ +N +++ +K+ DFG A+ + E + + +
Sbjct: 139 FGLQVAKGMKFLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKT 196
Query: 120 RY-----YRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVL 173
+ A E + ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 197 GAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--- 252
Query: 174 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 220
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 253 -----QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 292
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 1 MRLLDHPNVVSLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 57
M +D+P+V L C ST + + +L+YV E H + + Y+
Sbjct: 68 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YL 116
Query: 58 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 117
+ QI + Y+ + + HRD+ +N+LV H +K+ DFG AK+L E
Sbjct: 117 LNWCVQIAEGMNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAE 174
Query: 118 CSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL 151
+ + A E I YT D+WS G + EL+
Sbjct: 175 GGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELM 210
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 24/101 (23%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 122
Q+ +AY+ V HRD+ +N LV +K+ DFG ++ + + YY
Sbjct: 182 QVAAGMAYLSERKFV-HRDLATRNCLVG-ENMVVKIADFGLSRNIYSAD---------YY 230
Query: 123 RA------------PELIFGATEYTAAIDIWSAGCVLAELL 151
+A PE IF YT D+W+ G VL E+
Sbjct: 231 KADGNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIF 270
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 25/118 (21%)
Query: 53 PLIYVKLYFYQICRALAYIHNTI-------GVCHRDIKPQNLLVNPHTHQLKLCDFGSAK 105
P + ++L C LA++H I + HRD K +N+LV + Q + D G A
Sbjct: 104 PHLALRLAVSAAC-GLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNL-QCCIADLGLAV 161
Query: 106 VLVKGEP-----NISYICSRYYRAPELI--------FGATEYTAAIDIWSAGCVLAEL 150
+ +G N + ++ Y APE++ F + ++T DIW+ G VL E+
Sbjct: 162 MHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWT---DIWAFGLVLWEI 216
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 3 LLDHPNVVSLKHCFFSTTEKDELYLNLVLEYV-PETVHRVIKHHYKMSQRMPLIYVKLYF 61
L H +VV +FS +D+ L + EY ++ I +Y++ +K
Sbjct: 67 LGQHSHVVR----YFSAWAEDDHML-IQNEYCNGGSLADAISENYRIMSYFKEAELKDLL 121
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLV------NPHTHQLKLCDFGSAKVLVK 109
Q+ R L YIH ++ + H DIKP N+ + N + + D+ S KV+ K
Sbjct: 122 LQVGRGLRYIH-SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 174
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 3 LLDHPNVVSLKHCFFSTTEKDELYLNLVLEYV-PETVHRVIKHHYKMSQRMPLIYVKLYF 61
L H +VV +FS +D+ L + EY ++ I +Y++ +K
Sbjct: 65 LGQHSHVVR----YFSAWAEDDHML-IQNEYCNGGSLADAISENYRIMSYFKEAELKDLL 119
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLV------NPHTHQLKLCDFGSAKVLVK 109
Q+ R L YIH ++ + H DIKP N+ + N + + D+ S KV+ K
Sbjct: 120 LQVGRGLRYIH-SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 172
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 41 VIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLV------NPHTH 94
I +Y++ +K Q+ R L YIH ++ + H DIKP N+ + N +
Sbjct: 97 AISENYRIMSYFKEAELKDLLLQVGRGLRYIH-SMSLVHMDIKPSNIFISRTSIPNAASE 155
Query: 95 QLKLCDFGSAKVLVK 109
+ D+ S KV+ K
Sbjct: 156 EGDEDDWASNKVMFK 170
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 3 LLDHPNVVSLKHCFFSTTEKDELYLNLVLEYV-PETVHRVIKHHYKMSQRMPLIYVKLYF 61
L H +VV +FS +D+ L + EY ++ I +Y++ +K
Sbjct: 65 LGQHSHVVR----YFSAWAEDDHML-IQNEYCNGGSLADAISENYRIMSYFKEAELKDLL 119
Query: 62 YQICRALAYIHNTIGVCHRDIKPQNLLV------NPHTHQLKLCDFGSAKVLVK 109
Q+ R L YIH ++ + H DIKP N+ + N + + D+ S KV+ K
Sbjct: 120 LQVGRGLRYIH-SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 172
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 26/104 (25%)
Query: 63 QIC----RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK-----------VL 107
+IC R L Y+H T + HRD+K N+L++ + K+ DFG +K +
Sbjct: 143 EICIGAARGLHYLH-TRAIIHRDVKSINILLDEN-FVPKITDFGISKKGTELDQTHLXXV 200
Query: 108 VKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
VKG + YI Y+ L T D++S G VL E+L
Sbjct: 201 VKG--TLGYIDPEYFIKGRL-------TEKSDVYSFGVVLFEVL 235
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 34.3 bits (77), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 26/104 (25%)
Query: 63 QIC----RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK-----------VL 107
+IC R L Y+H T + HRD+K N+L++ + K+ DFG +K +
Sbjct: 143 EICIGAARGLHYLH-TRAIIHRDVKSINILLDEN-FVPKITDFGISKKGTELGQTHLXXV 200
Query: 108 VKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 151
VKG + YI Y+ L T D++S G VL E+L
Sbjct: 201 VKG--TLGYIDPEYFIKGRL-------TEKSDVYSFGVVLFEVL 235
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVN-PHT---HQLKLCDFGSAKVLVKGE 111
Q+ + Y+H T + +RD+KP+N LV P T H + + DFG AK + E
Sbjct: 108 QLITRMEYVH-TKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPE 159
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 24/108 (22%)
Query: 63 QICRALAYIHNTI-------GVCHRDIKPQNLLVNPHTHQLKLCDFGSA--------KVL 107
I LA++H I + HRD+K +N+LV + Q + D G A ++
Sbjct: 113 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG-QCCIADLGLAVMHSQSTNQLD 171
Query: 108 VKGEPNISYICSRYYRAPELIFGATEYTA-----AIDIWSAGCVLAEL 150
V P + ++ Y APE++ + +DIW+ G VL E+
Sbjct: 172 VGNNPRVG---TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 24/107 (22%)
Query: 64 ICRALAYIHNTI-------GVCHRDIKPQNLLVNPHTHQLKLCDFGSA--------KVLV 108
I LA++H I + HRD+K +N+LV + Q + D G A ++ V
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG-QCCIADLGLAVMHSQSTNQLDV 172
Query: 109 KGEPNISYICSRYYRAPELIFGATEYTA-----AIDIWSAGCVLAEL 150
P + ++ Y APE++ + +DIW+ G VL E+
Sbjct: 173 GNNPRVG---TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLV----NPHTHQLKLCDFGSAKVLVKGE 111
Q+ + Y+H+ + +RD+KP+N L+ N H + + DFG AK + E
Sbjct: 105 QLLSRMEYVHSK-NLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPE 156
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 24/108 (22%)
Query: 63 QICRALAYIHNTI-------GVCHRDIKPQNLLVNPHTHQLKLCDFGSA--------KVL 107
I LA++H I + HRD+K +N+LV + Q + D G A ++
Sbjct: 142 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLD 200
Query: 108 VKGEPNISYICSRYYRAPELIFGATEYTA-----AIDIWSAGCVLAEL 150
V P + ++ Y APE++ + +DIW+ G VL E+
Sbjct: 201 VGNNPRVG---TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 49 SQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLV--NPHTHQLKLCDFGSAK 105
S+++ L V + Q+ + ++H+ HRDIKP N L+ +Q+ + DFG AK
Sbjct: 97 SRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK---VLVKGEPNISYICS 119
+ R + Y+ + HRD+ +N+LV + + K+ DFG ++ V VK + +
Sbjct: 140 DVARGMDYLSQKQFI-HRDLAARNILVGEN-YVAKIADFGLSRGQEVYVK--KTMGRLPV 195
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAEL--LLGQP 155
R+ L + YT D+WS G +L E+ L G P
Sbjct: 196 RWMAIESLNYSV--YTTNSDVWSYGVLLWEIVSLGGTP 231
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK---VLVKGEPNISYICS 119
+ R + Y+ + HRD+ +N+LV + + K+ DFG ++ V VK + +
Sbjct: 150 DVARGMDYLSQKQFI-HRDLAARNILVGEN-YVAKIADFGLSRGQEVYVK--KTMGRLPV 205
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAEL--LLGQP 155
R+ L + YT D+WS G +L E+ L G P
Sbjct: 206 RWMAIESLNYSV--YTTNSDVWSYGVLLWEIVSLGGTP 241
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGS 103
+ R+LA + G H D++P N++V+ H +L DFGS
Sbjct: 348 LLRSLAALEKQ-GFWHDDVRPWNVMVDARQH-ARLIDFGS 385
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGS 103
+ R+LA + G H D++P N++V+ H +L DFGS
Sbjct: 348 LLRSLAALEKQ-GFWHDDVRPWNVMVDARQH-ARLIDFGS 385
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 1 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR-------MP 53
M+ DHP+V L + K L + +V+ +P H + H + ++ R +P
Sbjct: 79 MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVI--LPFMKHGDL-HAFLLASRIGENPFNLP 135
Query: 54 LIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLC--DFGSAKVLVKGE 111
L + + I + Y+ ++ HRD+ +N ++ + +C DFG ++ + G+
Sbjct: 136 LQTLVRFMVDIACGMEYL-SSRNFIHRDLAARNCML---AEDMTVCVADFGLSRKIYSGD 191
Query: 112 PNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPG 159
S+ + A E + YT D+W+ G + E++ GQ + G
Sbjct: 192 YYRQGCASKLPVKWLALESL-ADNLYTVHSDVWAFGVTMWEIMTRGQTPYAG 242
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 64 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGS 103
+ R+LA + G H D++P N++V+ H +L DFGS
Sbjct: 348 LLRSLAALEKK-GFWHDDVRPWNVMVDARQHA-RLIDFGS 385
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 30.8 bits (68), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK---VLVKGEPNISYICS 119
+ R + Y+ + HR++ +N+LV + + K+ DFG ++ V VK + +
Sbjct: 147 DVARGMDYLSQKQFI-HRNLAARNILVGEN-YVAKIADFGLSRGQEVYVK--KTMGRLPV 202
Query: 120 RYYRAPELIFGATEYTAAIDIWSAGCVLAEL--LLGQP 155
R+ L + YT D+WS G +L E+ L G P
Sbjct: 203 RWMAIESLNYSV--YTTNSDVWSYGVLLWEIVSLGGTP 238
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 17/119 (14%)
Query: 50 QRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLC--DFGSAKVL 107
+ +PL + + I + Y+ N HRD+ +N ++ + +C DFG +K +
Sbjct: 142 KHIPLQTLLKFMVDIALGMEYLSNR-NFLHRDLAARNCMLR---DDMTVCVADFGLSKKI 197
Query: 108 VKGEPNISYICSRYYRAPELIFGATE------YTAAIDIWSAGCVLAELLL-GQPLFPG 159
G+ Y R + P + + A E YT+ D+W+ G + E+ G +PG
Sbjct: 198 YSGD---YYRQGRIAKMP-VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPG 252
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 49 SQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLV--NPHTHQLKLCDFGSAK 105
S++ L V L Q+ + YIH+ HRD+KP N L+ + + + DFG AK
Sbjct: 99 SRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 49 SQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLV--NPHTHQLKLCDFGSAK 105
S++ L V L Q+ + YIH+ HRD+KP N L+ + + + DFG AK
Sbjct: 99 SRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 49 SQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLV--NPHTHQLKLCDFGSAK 105
S++ L V L Q+ + YIH+ HRD+KP N L+ + + + DFG AK
Sbjct: 97 SRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLV----NPHTHQLKLCDFGSAKVLVKGE 111
Q+ + Y+H+ + +RD+KP+N L+ N + + DFG AK + E
Sbjct: 113 QLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPE 164
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 26 YLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQ 85
Y ++++ + ++ + + K R ++ + L +I L YIH V H DIK
Sbjct: 126 YRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSL---RILDILEYIHEHEYV-HGDIKAS 181
Query: 86 NLLVN-PHTHQLKLCDFGSA 104
NLL+N + Q+ L D+G A
Sbjct: 182 NLLLNYKNPDQVYLVDYGLA 201
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 26 YLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQ 85
Y ++++ + ++ + + K R ++ + L I L YIH V H DIK
Sbjct: 126 YRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDI---LEYIHEHEYV-HGDIKAS 181
Query: 86 NLLVN-PHTHQLKLCDFGSA 104
NLL+N + Q+ L D+G A
Sbjct: 182 NLLLNYKNPDQVYLVDYGLA 201
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 26 YLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQ 85
Y ++++ + ++ + + K R ++ + L +I L YIH V H DIK
Sbjct: 126 YRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSL---RILDILEYIHEHEYV-HGDIKAS 181
Query: 86 NLLVN-PHTHQLKLCDFGSA 104
NLL+N + Q+ L D+G A
Sbjct: 182 NLLLNYKNPDQVYLVDYGLA 201
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLV----NPHTHQLKLCDFGSAKVLVKGE 111
Q+ + Y+H+ + +RD+KP+N L+ N + + DF AK + E
Sbjct: 134 QLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 185
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 63 QICRALAYIHNTIGVCHRDIKPQNLLV----NPHTHQLKLCDFGSAKVLVKGE 111
Q+ + Y+H+ + +RD+KP+N L+ N + + DF AK + E
Sbjct: 113 QLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164
>pdb|3H5D|A Chain A, Dihydrodipicolinate Synthase From Drug-Resistant
Streptococc Pneumoniae
pdb|3H5D|B Chain B, Dihydrodipicolinate Synthase From Drug-Resistant
Streptococc Pneumoniae
pdb|3H5D|C Chain C, Dihydrodipicolinate Synthase From Drug-Resistant
Streptococc Pneumoniae
pdb|3H5D|D Chain D, Dihydrodipicolinate Synthase From Drug-Resistant
Streptococc Pneumoniae
Length = 311
Score = 27.3 bits (59), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 1 MRLLDHPNVVSLKHC 15
+RL DHPN++ +K C
Sbjct: 156 LRLADHPNIIGVKEC 170
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.142 0.446
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,455,752
Number of Sequences: 62578
Number of extensions: 410421
Number of successful extensions: 3626
Number of sequences better than 100.0: 906
Number of HSP's better than 100.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 354
Number of HSP's that attempted gapping in prelim test: 1549
Number of HSP's gapped (non-prelim): 957
length of query: 292
length of database: 14,973,337
effective HSP length: 98
effective length of query: 194
effective length of database: 8,840,693
effective search space: 1715094442
effective search space used: 1715094442
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (24.3 bits)