BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022803
(292 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LZM3|PPCS2_ARATH Phosphopantothenate--cysteine ligase 2 OS=Arabidopsis thaliana
GN=PPCS2 PE=2 SV=2
Length = 309
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/309 (60%), Positives = 235/309 (76%), Gaps = 21/309 (6%)
Query: 5 LNSEIESFFDSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRY 64
+ EI SFF+S+PP + I + L EFI LNSS G RR+ CVTSGGTTVPLEQRCVRY
Sbjct: 1 MEDEISSFFESSPPQKNMEEILENLNEFIKLNSSSQGGRRIVCVTSGGTTVPLEQRCVRY 60
Query: 65 IDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ-G 123
IDNFSSG+RGAASTE+ +K GYAVIFLYRRGTC+PYC SLPDD FLECFE ++++ +Q
Sbjct: 61 IDNFSSGNRGAASTENFVKAGYAVIFLYRRGTCQPYCRSLPDDPFLECFEFSDKTNIQVH 120
Query: 124 SSRRPSVE--------------------ASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAV 163
+S +V+ +++Y Y++ML++IA + + +GPCSMFYLAAAV
Sbjct: 121 TSHLEAVKMAVMDQQTAVAEGSLLKLPFSTIYEYLQMLRLIAEALKDVGPCSMFYLAAAV 180
Query: 164 SDFYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLE 223
SDFYVPWKSM EHKI+SGSGPLD++L QVPKMLSVLR WAP AFCISFKLETD++IL+E
Sbjct: 181 SDFYVPWKSMTEHKIESGSGPLDIRLAQVPKMLSVLRSNWAPKAFCISFKLETDSKILME 240
Query: 224 KADMARKKYGMHAVVANELLSRKEQVVVVTNNGKIPVYRDKTSSDSDVEKPLTKLLVDRH 283
KA A +KY +HAVVANEL +RKE+VVVV+++G + V R+ +S VE L +L+VDRH
Sbjct: 241 KATKALRKYKVHAVVANELSTRKEEVVVVSSSGNVVVRRECDKPESFVEDNLIRLIVDRH 300
Query: 284 SVYIKDSNT 292
S YIK+S+
Sbjct: 301 STYIKESHN 309
>sp|Q8GXR5|PPCS1_ARATH Phosphopantothenate--cysteine ligase 1 OS=Arabidopsis thaliana
GN=PPCS1 PE=2 SV=1
Length = 317
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/307 (61%), Positives = 231/307 (75%), Gaps = 22/307 (7%)
Query: 8 EIESFFDSAPPLNDRAAISQKLKEFIALNSS-ESGTRRVACVTSGGTTVPLEQRCVRYID 66
EI SFF+S+PPL ++ I L +FI LNSS + G RR+ CVTSGGTTVPLEQRCVRYID
Sbjct: 11 EISSFFESSPPLKNKEEIVANLNQFIELNSSCQGGMRRIVCVTSGGTTVPLEQRCVRYID 70
Query: 67 NFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ---- 122
NFSSG+RGAASTE+ +K GYAVIFLYRRGTC+PYC LPDD FLECFE + +Q
Sbjct: 71 NFSSGNRGAASTENFVKAGYAVIFLYRRGTCQPYCRYLPDDPFLECFEFPDAKNIQVHGS 130
Query: 123 --GSSRRPSVE---------------ASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165
G+ + ++ +++Y Y++ML++IA + +GPCSMFYLAAAVSD
Sbjct: 131 HSGAVKMAVMDQQAAVAEGRLLKLPFSTIYEYLQMLRLIATILKDVGPCSMFYLAAAVSD 190
Query: 166 FYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLEKA 225
FYVPW SM EHKI+SGSGPLD++L QVPKMLS+LR WAP AFCISFKLETD++ILLEKA
Sbjct: 191 FYVPWLSMTEHKIESGSGPLDIRLAQVPKMLSILRSNWAPKAFCISFKLETDSKILLEKA 250
Query: 226 DMARKKYGMHAVVANELLSRKEQVVVVTNNGKIPVYRDKTSSDSDVEKPLTKLLVDRHSV 285
A +KY +HAVVANELL+RKE+VVVV+++G + V RD +S VE L +LLVDRHS
Sbjct: 251 TKALQKYKVHAVVANELLTRKEEVVVVSSSGNVVVRRDSNKPESIVEDNLIRLLVDRHST 310
Query: 286 YIKDSNT 292
YIK+S T
Sbjct: 311 YIKESLT 317
>sp|Q9HAB8|PPCS_HUMAN Phosphopantothenate--cysteine ligase OS=Homo sapiens GN=PPCS PE=1
SV=2
Length = 311
Score = 208 bits (530), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/277 (42%), Positives = 156/277 (56%), Gaps = 28/277 (10%)
Query: 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCS 102
RRV VTSGGT VPLE R VR++DNFSSG RGA S E + GY V+FLYR + PY
Sbjct: 35 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAH 94
Query: 103 SLPDDAFLECFEVT------------EESAVQG--SSRRPSVEA------------SLYN 136
P +L + EE+A+ G + R EA +L +
Sbjct: 95 RFPPQTWLSALRPSGPALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLAVEFTTLAD 154
Query: 137 YIRMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDMQLLQVPKML 196
Y+ +LQ A + LGP +MFYLAAAVSDFYVP M EHKIQS GPL + + VPK+L
Sbjct: 155 YLHLLQAAAQALNPLGPSAMFYLAAAVSDFYVPVSEMPEHKIQSSGGPLQITMKMVPKLL 214
Query: 197 SVLRKEWAPMAFCISFKLETDAEILLEKADMARKKYGMHAVVANELLSRKEQVVVVTNNG 256
S L K+WAP AF ISFKLETD I++ +A A + Y VVAN L SR+ V +VT +
Sbjct: 215 SPLVKDWAPKAFIISFKLETDPAIVINRARKALEIYQHQVVVANILESRQSFVFIVTKDS 274
Query: 257 --KIPVYRDKTSSDSDVEKPLTKLLVDRHSVYIKDSN 291
K+ + ++ ++E+ + L RH+ +I D N
Sbjct: 275 ETKLLLSEEEIEKGVEIEEKIVDNLQSRHTAFIGDRN 311
>sp|Q8VDG5|PPCS_MOUSE Phosphopantothenate--cysteine ligase OS=Mus musculus GN=Ppcs PE=2
SV=1
Length = 311
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 168/300 (56%), Gaps = 30/300 (10%)
Query: 22 RAAISQKLKEFIALNSSESG--TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTE 79
R A + + E +A ++ G RRV +TSGGT VPLE R VR++DNFSSG RGAAS E
Sbjct: 12 RPAGAARWAEVMARFAARLGEQGRRVVLITSGGTKVPLEARAVRFLDNFSSGRRGAASAE 71
Query: 80 HLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVT------------EESAVQG---- 123
+ GY V+FLYR + PY P A+L + EE+A+ G
Sbjct: 72 VFLAAGYGVLFLYRARSAFPYAHRFPPQAWLSALRPSGPAQSGKLSLEAEENALPGFAAA 131
Query: 124 -SSRRPSVEA---------SLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSM 173
S + + A +L +Y+ +LQ A++ LG +MFYLAAAVSDFY+P M
Sbjct: 132 LQSYQEAAAAGTFLAVEFTTLADYLHLLQAAALALSPLGSSAMFYLAAAVSDFYIPVSEM 191
Query: 174 AEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLEKADMARKKYG 233
EHKI S GPL + + VPKMLS L K+WAP AF +SFKLETD +I++ +A A + Y
Sbjct: 192 PEHKIHSSGGPLQITMKMVPKMLSPLVKDWAPKAFVVSFKLETDPDIIISRARNALEVYQ 251
Query: 234 MHAVVANELLSRKEQVVVVTNN--GKIPVYRDKTSSDSDVEKPLTKLLVDRHSVYIKDSN 291
VVAN L S K V++VT + ++ + ++ + +E+ + L RH+ +I D N
Sbjct: 252 HQVVVANILESIKSFVIIVTKDSETELLLSEEEVAKGLVIEEKIVDDLRSRHTAFICDKN 311
>sp|Q9USK7|YJ2I_SCHPO Uncharacterized protein C4B3.18 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC4B3.18 PE=3 SV=1
Length = 316
Score = 182 bits (462), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/268 (39%), Positives = 154/268 (57%), Gaps = 30/268 (11%)
Query: 12 FFDSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSG 71
FF+ P N +S +++FI L +S ++ +A VTSGGT VPLEQ VR+IDNFS+G
Sbjct: 10 FFEENPCPNSLGDVSSLIEDFINL---QSNSQNIAFVTSGGTLVPLEQNTVRFIDNFSAG 66
Query: 72 HRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQGSSRRPSVE 131
+RGAAS E+ K GY+VIFLYR + P+ + + FE + S + + +
Sbjct: 67 NRGAASAEYFCKSGYSVIFLYRNYSLMPFTRRY-EGPWTNLFERSNGSQEKPWIVKQEFQ 125
Query: 132 ASLYN------------------------YIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167
++++N Y+ L+ IA + + ++FYLAAAVSDF+
Sbjct: 126 STVFNALNELDTYTKHHRLIMIPYTTLTEYLWYLKAIAERLQIIASRALFYLAAAVSDFH 185
Query: 168 VPWKSMAEHKIQSGSG--PLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLEKA 225
+P K ++EHKIQSGSG L++++ VPK L L WAP A ISFKLETD IL++KA
Sbjct: 186 IPPKELSEHKIQSGSGSNKLEVKMHPVPKFLRFLVDTWAPEASIISFKLETDPSILIDKA 245
Query: 226 DMARKKYGMHAVVANELLSRKEQVVVVT 253
+A ++Y V+AN L +RK V VT
Sbjct: 246 RVALQRYNHQLVIANLLSTRKRSVAFVT 273
>sp|P40506|PPCS_YEAST Phosphopantothenate--cysteine ligase CAB2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CAB2 PE=1
SV=2
Length = 365
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 155/332 (46%), Gaps = 55/332 (16%)
Query: 7 SEIESFFDSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYID 66
+E E +F + P + + KEFI L S ++ +TSGGTTVPLE VR+ID
Sbjct: 38 TEEEQYFKTNPKPAYIDELIKDAKEFIDLQYSLK-RNKIVLITSGGTTVPLENNTVRFID 96
Query: 67 NFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLP---DDAFLECFEVTEESAVQG 123
NFS+G RGA+S E + GY+VIFL+R + PY S + FL+ + +G
Sbjct: 97 NFSAGTRGASSAEQFLANGYSVIFLHREFSLTPYNRSFSHSINTLFLDYIDS------EG 150
Query: 124 SSRRPSVEASLYN------------------------YIRMLQMIAVSSRSLGPCSMFYL 159
+ E L N Y+ L+ IA + G C +FYL
Sbjct: 151 KIKPEFAENVLKNKKLYDKYMEKEEKLLLLPFTTVNQYLWSLKSIAKLLNNSG-C-LFYL 208
Query: 160 AAAVSDFYVPWKSMAEHKIQSGS-------------------GPLDMQLLQVPKMLSVLR 200
AAAVSDF+VP+ + +HKIQSG G L + L VPK L L
Sbjct: 209 AAAVSDFFVPYSRLPQHKIQSGDNGKMGANNDTEGTTRTTPDGKLIVNLDPVPKFLRRLV 268
Query: 201 KEWAPMAFCISFKLETDAEILLEKADMARKKYGMHAVVANELLSRKEQVVVVTNNGKIPV 260
+ WA A +SFKLETD +LL K A +Y V+ N L +R +QV+ V+ +
Sbjct: 269 ESWATQAMIVSFKLETDESMLLYKCTQALDRYNHQLVIGNLLQTRNKQVIFVSPENRKGD 328
Query: 261 YRDKTSSDSDVEKPLTKLLVDRHSVYIKDSNT 292
+ +E+ + ++ RH ++ S T
Sbjct: 329 WVRLDEKHHSIEEMIIPEVIARHDKWVAHSKT 360
>sp|Q58323|COABC_METJA Coenzyme A biosynthesis bifunctional protein CoaBC
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=coaBC
PE=3 SV=1
Length = 403
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 90/214 (42%), Gaps = 41/214 (19%)
Query: 31 EFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIF 90
E I N + G R + +GGT +++ VR I N SSG G A E K G+ V
Sbjct: 185 EKIGNNLKKEGNR--VLILNGGTVEFIDK--VRVISNLSSGKMGVALAEAFCKEGFYVEV 240
Query: 91 LYRRGTCEPYCSSLPDDAFLECFEVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRS 150
+ G PY + + L E+ + A++ + I +SS
Sbjct: 241 ITAMGLEPPY--YIKNHKVLTAKEMLNK-AIELAKDFD---------------IIISS-- 280
Query: 151 LGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCI 210
AA+SDF V E K+ S L ++L + PK+L LR+ + I
Sbjct: 281 ----------AAISDFTVES---FEGKLSSEE-ELILKLKRNPKVLEELRRIYKDKVI-I 325
Query: 211 SFKLE--TDAEILLEKADMARKKYGMHAVVANEL 242
FK E D + L+ +A KY ++ ++AN+L
Sbjct: 326 GFKAEYNLDEKELINRAKERLNKYNLNMIIANDL 359
>sp|Q54LF0|SIR2B_DICDI NAD-dependent deacetylase sir2B OS=Dictyostelium discoideum
GN=sir2B PE=2 SV=1
Length = 778
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 22/143 (15%)
Query: 138 IRMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDMQLLQV----- 192
I +L+ I S S FYL A+ + Y P K++ E + + P + L +
Sbjct: 2 INILKDILYKSYSYLAFPFFYLGWAIKNSYQPNKTIKEEESKPPKYPKEWSDLFIHSYNN 61
Query: 193 --PKMLSVLRKE-----------WAPMAFCISFKLETDAEILLEK-ADMARKKY-GMHAV 237
K+L +++KE W P+ +S K +LLE+ +++ K+Y H
Sbjct: 62 EHEKVLEIIQKEPNSINSVDSLNWTPLHVAVSNKSIEVVTLLLERNIEISIKRYTAFHIA 121
Query: 238 VANELLSRKEQVVVVTN--NGKI 258
N L+ E+++ + NG I
Sbjct: 122 ACNGDLNIIEKMITMNRVPNGNI 144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,887,899
Number of Sequences: 539616
Number of extensions: 3738743
Number of successful extensions: 8495
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 8477
Number of HSP's gapped (non-prelim): 12
length of query: 292
length of database: 191,569,459
effective HSP length: 116
effective length of query: 176
effective length of database: 128,974,003
effective search space: 22699424528
effective search space used: 22699424528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)