Query 022803
Match_columns 292
No_of_seqs 129 out of 1073
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 06:14:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022803.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022803hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2728 Uncharacterized conser 100.0 1.7E-61 3.7E-66 433.5 20.3 275 12-291 1-301 (302)
2 PRK13982 bifunctional SbtC-lik 100.0 6.1E-57 1.3E-61 443.7 26.2 231 12-283 225-470 (475)
3 PF04127 DFP: DNA / pantothena 100.0 2E-55 4.3E-60 387.0 17.1 175 43-252 3-185 (185)
4 PRK05579 bifunctional phosphop 100.0 2.1E-52 4.6E-57 405.7 26.2 232 11-283 159-397 (399)
5 PRK09620 hypothetical protein; 100.0 7.2E-52 1.6E-56 375.4 24.3 209 43-283 3-223 (229)
6 TIGR00521 coaBC_dfp phosphopan 100.0 2.1E-51 4.6E-56 397.6 26.1 227 14-279 158-389 (390)
7 PRK06732 phosphopantothenate-- 100.0 4.7E-49 1E-53 356.8 22.9 203 44-281 1-226 (229)
8 TIGR02114 coaB_strep phosphopa 100.0 4.1E-47 8.8E-52 343.7 22.3 201 45-281 1-225 (227)
9 COG0452 Dfp Phosphopantothenoy 100.0 2.5E-43 5.5E-48 341.5 21.9 228 15-283 158-391 (392)
10 PRK06398 aldose dehydrogenase; 98.0 1.8E-05 4E-10 71.7 8.2 84 38-167 3-86 (258)
11 PRK06179 short chain dehydroge 97.9 4.3E-05 9.2E-10 69.3 9.1 84 43-167 4-87 (270)
12 PRK05717 oxidoreductase; Valid 97.9 2.4E-05 5.2E-10 70.4 7.0 91 38-166 7-97 (255)
13 PRK06138 short chain dehydroge 97.9 4.7E-05 1E-09 67.8 8.3 91 43-167 5-95 (252)
14 PRK06841 short chain dehydroge 97.9 4.1E-05 8.9E-10 68.5 7.7 92 38-167 12-103 (255)
15 PRK07856 short chain dehydroge 97.9 8.9E-05 1.9E-09 66.6 9.6 85 39-166 4-88 (252)
16 PRK06935 2-deoxy-D-gluconate 3 97.9 0.00011 2.4E-09 66.2 10.2 101 31-167 5-105 (258)
17 PRK06171 sorbitol-6-phosphate 97.9 5.7E-05 1.2E-09 68.3 8.4 84 38-165 6-89 (266)
18 PRK12481 2-deoxy-D-gluconate 3 97.9 7.9E-05 1.7E-09 67.3 9.2 91 39-166 6-96 (251)
19 PRK06194 hypothetical protein; 97.9 6.9E-05 1.5E-09 68.5 8.8 92 43-167 6-97 (287)
20 PRK06523 short chain dehydroge 97.9 5.3E-05 1.1E-09 68.2 7.9 83 38-164 6-88 (260)
21 PRK12823 benD 1,6-dihydroxycyc 97.8 3E-05 6.4E-10 69.8 6.1 93 38-166 5-97 (260)
22 TIGR03325 BphB_TodD cis-2,3-di 97.8 9.5E-05 2.1E-09 66.9 9.4 87 43-165 5-91 (262)
23 PRK08416 7-alpha-hydroxysteroi 97.8 6.1E-05 1.3E-09 68.2 8.0 94 38-164 5-98 (260)
24 TIGR01832 kduD 2-deoxy-D-gluco 97.8 5.4E-05 1.2E-09 67.5 7.5 89 43-166 5-93 (248)
25 PRK08628 short chain dehydroge 97.8 5.5E-05 1.2E-09 68.0 6.9 93 38-166 4-96 (258)
26 PRK06079 enoyl-(acyl carrier p 97.8 5.4E-05 1.2E-09 68.5 6.8 89 39-165 5-95 (252)
27 PRK05867 short chain dehydroge 97.8 0.0001 2.2E-09 66.3 8.5 94 39-167 7-100 (253)
28 PRK08265 short chain dehydroge 97.8 7.6E-05 1.6E-09 67.7 7.6 89 39-165 4-92 (261)
29 PRK07063 short chain dehydroge 97.8 0.00011 2.5E-09 66.1 8.6 96 38-167 4-100 (260)
30 PRK07523 gluconate 5-dehydroge 97.8 9.8E-05 2.1E-09 66.3 8.0 95 38-167 7-101 (255)
31 PRK08226 short chain dehydroge 97.8 5.6E-05 1.2E-09 68.1 6.5 91 43-167 6-96 (263)
32 KOG1201 Hydroxysteroid 17-beta 97.8 8.1E-05 1.8E-09 70.1 7.6 92 37-167 34-128 (300)
33 PRK06200 2,3-dihydroxy-2,3-dih 97.8 0.00016 3.4E-09 65.4 9.3 87 43-166 6-93 (263)
34 PLN02253 xanthoxin dehydrogena 97.8 5.3E-05 1.2E-09 69.1 6.3 92 38-165 15-106 (280)
35 PRK08993 2-deoxy-D-gluconate 3 97.7 0.0002 4.3E-09 64.6 9.3 93 38-167 7-99 (253)
36 PRK12937 short chain dehydroge 97.7 0.00016 3.6E-09 64.0 8.6 93 43-167 5-97 (245)
37 PRK07062 short chain dehydroge 97.7 0.00017 3.6E-09 65.2 8.8 96 38-167 5-101 (265)
38 PRK08589 short chain dehydroge 97.7 6.9E-05 1.5E-09 68.5 6.3 91 39-165 4-94 (272)
39 PRK06114 short chain dehydroge 97.7 0.0002 4.4E-09 64.5 9.2 96 38-167 5-100 (254)
40 PRK12938 acetyacetyl-CoA reduc 97.7 0.00015 3.2E-09 64.6 8.2 92 43-166 3-94 (246)
41 PRK07097 gluconate 5-dehydroge 97.7 0.00017 3.7E-09 65.4 8.6 95 38-167 7-101 (265)
42 PRK05854 short chain dehydroge 97.7 0.00017 3.6E-09 67.8 8.8 95 38-166 11-106 (313)
43 PRK06196 oxidoreductase; Provi 97.7 0.00016 3.5E-09 67.7 8.5 89 38-165 23-111 (315)
44 PRK07814 short chain dehydroge 97.7 0.00018 3.9E-09 65.2 8.5 91 43-166 10-100 (263)
45 PRK05876 short chain dehydroge 97.7 0.00016 3.4E-09 66.6 8.2 94 39-167 4-97 (275)
46 PRK06128 oxidoreductase; Provi 97.7 0.00018 3.9E-09 66.8 8.6 95 38-165 52-146 (300)
47 PRK13394 3-hydroxybutyrate deh 97.7 0.0002 4.4E-09 64.1 8.6 92 43-167 7-98 (262)
48 PRK08159 enoyl-(acyl carrier p 97.7 0.0002 4.4E-09 65.8 8.6 92 43-166 10-101 (272)
49 PRK06180 short chain dehydroge 97.7 0.00027 5.9E-09 64.6 9.4 89 43-167 4-92 (277)
50 PRK07774 short chain dehydroge 97.6 0.0002 4.3E-09 63.8 8.1 89 44-165 7-95 (250)
51 PRK06482 short chain dehydroge 97.6 0.00029 6.3E-09 64.1 9.3 88 44-167 3-90 (276)
52 PRK12743 oxidoreductase; Provi 97.6 0.00025 5.5E-09 63.9 8.7 93 43-167 2-94 (256)
53 PRK06463 fabG 3-ketoacyl-(acyl 97.6 0.00025 5.3E-09 63.8 8.6 86 43-166 7-92 (255)
54 PRK07478 short chain dehydroge 97.6 0.00023 5E-09 63.9 8.4 89 44-165 7-95 (254)
55 PRK08085 gluconate 5-dehydroge 97.6 0.00027 5.8E-09 63.5 8.8 92 43-167 9-100 (254)
56 PRK07791 short chain dehydroge 97.6 0.00032 7E-09 64.9 9.5 98 43-165 6-104 (286)
57 PRK06197 short chain dehydroge 97.6 0.00022 4.8E-09 66.2 8.5 94 38-165 13-107 (306)
58 PRK05872 short chain dehydroge 97.6 0.00029 6.2E-09 65.4 9.2 94 38-167 6-99 (296)
59 PRK08594 enoyl-(acyl carrier p 97.6 0.00032 7E-09 63.8 9.3 94 38-164 4-98 (257)
60 PRK07067 sorbitol dehydrogenas 97.6 0.00035 7.5E-09 62.8 9.3 88 43-166 6-93 (257)
61 PRK06182 short chain dehydroge 97.6 0.00015 3.3E-09 66.0 6.9 86 43-167 3-88 (273)
62 PRK07577 short chain dehydroge 97.6 0.00031 6.6E-09 62.0 8.7 80 43-167 3-82 (234)
63 PRK08643 acetoin reductase; Va 97.6 0.0003 6.5E-09 63.1 8.7 92 43-167 2-93 (256)
64 PRK06550 fabG 3-ketoacyl-(acyl 97.6 0.00042 9.1E-09 61.2 9.5 36 39-94 3-38 (235)
65 PRK12827 short chain dehydroge 97.6 0.00033 7.2E-09 62.0 8.8 95 44-167 7-101 (249)
66 PRK07035 short chain dehydroge 97.6 0.00026 5.6E-09 63.4 8.2 94 38-166 5-98 (252)
67 PRK07985 oxidoreductase; Provi 97.6 0.00033 7.2E-09 65.1 9.1 94 38-164 46-139 (294)
68 PRK08220 2,3-dihydroxybenzoate 97.6 0.00026 5.6E-09 63.1 8.0 83 43-167 8-90 (252)
69 PRK12828 short chain dehydroge 97.6 0.00037 8E-09 61.2 8.8 89 43-166 7-95 (239)
70 PRK08251 short chain dehydroge 97.6 0.00027 5.8E-09 63.0 8.0 93 43-167 2-95 (248)
71 PRK08303 short chain dehydroge 97.6 0.00034 7.3E-09 65.8 8.9 100 38-164 5-107 (305)
72 PRK07825 short chain dehydroge 97.6 0.00015 3.3E-09 65.8 6.4 88 43-167 5-92 (273)
73 PRK08267 short chain dehydroge 97.6 0.00039 8.4E-09 62.6 9.0 89 44-167 2-91 (260)
74 PRK08945 putative oxoacyl-(acy 97.6 0.00025 5.4E-09 63.4 7.6 34 43-94 12-45 (247)
75 PRK06500 short chain dehydroge 97.6 0.00025 5.3E-09 63.0 7.5 33 44-94 7-39 (249)
76 PRK12826 3-ketoacyl-(acyl-carr 97.6 0.00037 8.1E-09 61.7 8.6 92 43-167 6-97 (251)
77 PRK12829 short chain dehydroge 97.6 0.0004 8.7E-09 62.2 8.9 90 38-164 8-97 (264)
78 PRK08063 enoyl-(acyl carrier p 97.6 0.00042 9.1E-09 61.7 9.0 92 44-167 5-96 (250)
79 PRK05557 fabG 3-ketoacyl-(acyl 97.6 0.0005 1.1E-08 60.6 9.4 93 43-167 5-97 (248)
80 PRK08263 short chain dehydroge 97.6 0.00046 9.9E-09 63.0 9.4 88 43-166 3-90 (275)
81 PRK07533 enoyl-(acyl carrier p 97.6 0.00038 8.3E-09 63.1 8.8 93 38-165 7-100 (258)
82 PRK09186 flagellin modificatio 97.5 0.0003 6.6E-09 62.8 7.9 90 43-164 4-94 (256)
83 PRK12939 short chain dehydroge 97.5 0.00035 7.7E-09 62.0 8.3 92 43-167 7-98 (250)
84 PRK08213 gluconate 5-dehydroge 97.5 8.2E-05 1.8E-09 67.0 4.2 95 38-167 9-103 (259)
85 PRK08340 glucose-1-dehydrogena 97.5 0.00042 9.2E-09 62.5 8.8 89 44-166 1-89 (259)
86 PRK07109 short chain dehydroge 97.5 0.00032 7E-09 66.7 8.3 95 38-167 5-99 (334)
87 PRK12384 sorbitol-6-phosphate 97.5 0.00038 8.2E-09 62.6 8.3 90 44-165 3-93 (259)
88 PRK12825 fabG 3-ketoacyl-(acyl 97.5 0.00047 1E-08 60.7 8.7 92 44-167 7-98 (249)
89 PRK06603 enoyl-(acyl carrier p 97.5 0.00011 2.3E-09 67.0 4.7 89 43-165 8-98 (260)
90 PRK07890 short chain dehydroge 97.5 0.00042 9E-09 62.0 8.5 89 43-164 5-93 (258)
91 PRK12745 3-ketoacyl-(acyl-carr 97.5 0.00038 8.3E-09 62.2 8.1 90 44-165 3-92 (256)
92 PRK07231 fabG 3-ketoacyl-(acyl 97.5 0.00042 9.1E-09 61.5 8.4 87 44-164 6-92 (251)
93 PRK08690 enoyl-(acyl carrier p 97.5 0.00043 9.3E-09 63.0 8.6 93 39-165 4-96 (261)
94 PRK12935 acetoacetyl-CoA reduc 97.5 0.00056 1.2E-08 60.9 9.2 91 43-165 6-96 (247)
95 PRK09134 short chain dehydroge 97.5 0.00043 9.4E-09 62.3 8.4 93 43-167 9-101 (258)
96 PRK07074 short chain dehydroge 97.5 0.00059 1.3E-08 61.2 9.2 89 44-167 3-91 (257)
97 PRK09135 pteridine reductase; 97.5 0.00049 1.1E-08 60.9 8.5 92 43-165 6-97 (249)
98 PRK07792 fabG 3-ketoacyl-(acyl 97.5 0.00052 1.1E-08 64.2 9.0 94 38-166 9-102 (306)
99 PRK12429 3-hydroxybutyrate deh 97.5 0.00046 9.9E-09 61.5 8.3 92 43-167 4-95 (258)
100 PRK07024 short chain dehydroge 97.5 0.00016 3.4E-09 65.3 5.3 90 44-167 3-92 (257)
101 PRK08278 short chain dehydroge 97.5 0.00051 1.1E-08 62.9 8.7 95 44-166 7-103 (273)
102 PRK06914 short chain dehydroge 97.5 0.00019 4.1E-09 65.4 5.8 91 43-166 3-94 (280)
103 PRK08936 glucose-1-dehydrogena 97.5 0.00059 1.3E-08 61.5 9.0 94 38-165 4-97 (261)
104 PRK08339 short chain dehydroge 97.5 0.00036 7.9E-09 63.6 7.7 37 38-94 5-41 (263)
105 PRK13656 trans-2-enoyl-CoA red 97.5 0.00031 6.7E-09 68.8 7.5 130 8-165 6-143 (398)
106 PRK06124 gluconate 5-dehydroge 97.5 0.00048 1E-08 61.8 8.2 95 38-167 8-102 (256)
107 PRK07666 fabG 3-ketoacyl-(acyl 97.5 0.00055 1.2E-08 60.7 8.5 90 44-166 8-97 (239)
108 PRK06505 enoyl-(acyl carrier p 97.5 0.00056 1.2E-08 62.9 8.7 89 43-165 7-97 (271)
109 PRK12744 short chain dehydroge 97.5 0.00068 1.5E-08 61.0 9.1 95 43-166 8-102 (257)
110 PRK08277 D-mannonate oxidoredu 97.5 0.00055 1.2E-08 62.3 8.5 93 38-165 7-99 (278)
111 PRK06483 dihydromonapterin red 97.5 0.00056 1.2E-08 60.7 8.4 84 44-165 3-86 (236)
112 PRK10538 malonic semialdehyde 97.5 0.00065 1.4E-08 60.9 8.8 86 44-165 1-86 (248)
113 PRK05693 short chain dehydroge 97.5 0.00051 1.1E-08 62.5 8.3 85 44-167 2-86 (274)
114 PRK07806 short chain dehydroge 97.5 0.00064 1.4E-08 60.5 8.8 34 43-94 6-39 (248)
115 PRK06139 short chain dehydroge 97.5 0.00041 8.9E-09 66.1 7.9 92 43-167 7-98 (330)
116 COG0300 DltE Short-chain dehyd 97.4 0.00011 2.5E-09 68.4 4.0 93 43-168 6-99 (265)
117 PRK05653 fabG 3-ketoacyl-(acyl 97.4 0.00055 1.2E-08 60.2 8.1 91 44-167 6-96 (246)
118 PRK09242 tropinone reductase; 97.4 0.00036 7.8E-09 62.7 7.1 93 43-167 9-102 (257)
119 PRK07984 enoyl-(acyl carrier p 97.4 0.00064 1.4E-08 62.3 8.8 90 43-165 6-96 (262)
120 PRK12936 3-ketoacyl-(acyl-carr 97.4 0.00088 1.9E-08 59.2 9.4 88 43-166 6-93 (245)
121 PRK05866 short chain dehydroge 97.4 0.00049 1.1E-08 64.0 8.1 92 43-167 40-131 (293)
122 PRK05875 short chain dehydroge 97.4 0.00069 1.5E-08 61.5 8.9 94 39-166 5-99 (276)
123 PRK06484 short chain dehydroge 97.4 0.00058 1.3E-08 68.0 9.0 79 70-166 278-356 (520)
124 TIGR01963 PHB_DH 3-hydroxybuty 97.4 0.00048 1E-08 61.3 7.6 90 44-166 2-91 (255)
125 PRK07904 short chain dehydroge 97.4 0.00086 1.9E-08 60.8 9.3 93 41-165 6-99 (253)
126 PRK08642 fabG 3-ketoacyl-(acyl 97.4 0.00072 1.6E-08 60.2 8.7 87 43-164 5-92 (253)
127 PRK06172 short chain dehydroge 97.4 0.00068 1.5E-08 60.7 8.5 90 43-165 7-96 (253)
128 PRK06701 short chain dehydroge 97.4 0.00086 1.9E-08 62.2 9.4 94 38-165 43-136 (290)
129 PRK09072 short chain dehydroge 97.4 0.00063 1.4E-08 61.5 8.2 90 43-167 5-94 (263)
130 PF00106 adh_short: short chai 97.4 0.00085 1.8E-08 56.0 8.4 94 44-167 1-94 (167)
131 PRK12748 3-ketoacyl-(acyl-carr 97.4 0.00063 1.4E-08 61.2 8.1 102 39-167 3-109 (256)
132 PRK07370 enoyl-(acyl carrier p 97.4 0.00082 1.8E-08 61.1 8.8 96 39-165 4-99 (258)
133 PRK06720 hypothetical protein; 97.4 0.0011 2.3E-08 57.5 9.0 92 43-167 16-107 (169)
134 PRK07453 protochlorophyllide o 97.4 0.00057 1.2E-08 64.0 7.8 34 43-94 6-39 (322)
135 TIGR03206 benzo_BadH 2-hydroxy 97.4 0.00079 1.7E-08 59.8 8.4 91 43-166 3-93 (250)
136 PRK06113 7-alpha-hydroxysteroi 97.4 0.00021 4.5E-09 64.3 4.6 91 43-166 11-101 (255)
137 PRK07576 short chain dehydroge 97.4 0.00065 1.4E-08 61.8 7.9 91 39-164 7-97 (264)
138 COG4221 Short-chain alcohol de 97.4 0.00092 2E-08 61.5 8.7 85 44-164 7-92 (246)
139 PRK06077 fabG 3-ketoacyl-(acyl 97.4 0.00068 1.5E-08 60.3 7.8 92 44-167 7-98 (252)
140 PRK05993 short chain dehydroge 97.4 0.00049 1.1E-08 63.0 7.0 86 43-167 4-90 (277)
141 PRK06198 short chain dehydroge 97.4 0.00059 1.3E-08 61.2 7.4 90 44-166 7-97 (260)
142 PRK08415 enoyl-(acyl carrier p 97.4 0.00082 1.8E-08 62.0 8.4 91 43-165 5-95 (274)
143 PRK06057 short chain dehydroge 97.3 0.00041 8.9E-09 62.4 6.2 89 38-166 4-92 (255)
144 PRK08862 short chain dehydroge 97.3 0.00084 1.8E-08 60.2 8.1 91 39-164 3-94 (227)
145 PRK07326 short chain dehydroge 97.3 0.00095 2.1E-08 58.9 8.3 90 43-166 6-95 (237)
146 PRK07677 short chain dehydroge 97.3 0.00097 2.1E-08 59.8 8.3 90 43-165 1-90 (252)
147 PRK07832 short chain dehydroge 97.3 0.00079 1.7E-08 61.3 7.7 87 44-167 1-92 (272)
148 PRK06947 glucose-1-dehydrogena 97.3 0.00089 1.9E-08 59.6 7.9 90 44-165 3-92 (248)
149 PRK06949 short chain dehydroge 97.3 0.00029 6.2E-09 63.1 4.6 94 38-166 6-99 (258)
150 PRK06123 short chain dehydroge 97.3 0.0011 2.3E-08 59.0 8.2 91 44-166 3-93 (248)
151 PRK08264 short chain dehydroge 97.3 0.0011 2.4E-08 58.7 8.2 35 43-95 6-41 (238)
152 PRK07454 short chain dehydroge 97.3 0.00088 1.9E-08 59.5 7.6 91 43-166 6-96 (241)
153 PRK06997 enoyl-(acyl carrier p 97.3 0.0013 2.9E-08 59.9 8.9 92 39-164 4-95 (260)
154 PRK12746 short chain dehydroge 97.3 0.0011 2.4E-08 59.2 8.2 37 38-94 3-39 (254)
155 PRK05565 fabG 3-ketoacyl-(acyl 97.3 0.0013 2.8E-08 58.1 8.5 90 44-166 6-96 (247)
156 PRK06484 short chain dehydroge 97.3 0.0011 2.5E-08 65.9 9.1 86 43-165 5-91 (520)
157 PRK07889 enoyl-(acyl carrier p 97.3 0.0014 3E-08 59.5 8.9 91 43-165 7-97 (256)
158 PRK12859 3-ketoacyl-(acyl-carr 97.3 0.0015 3.2E-08 59.0 8.9 102 38-166 3-109 (256)
159 PRK08703 short chain dehydroge 97.3 0.0017 3.7E-08 57.6 9.1 37 38-94 3-39 (239)
160 TIGR02415 23BDH acetoin reduct 97.3 0.0011 2.4E-08 59.1 7.9 90 44-166 1-90 (254)
161 PRK05855 short chain dehydroge 97.2 0.0018 4E-08 64.4 10.2 114 19-167 275-406 (582)
162 PRK15181 Vi polysaccharide bio 97.2 0.0011 2.4E-08 63.0 8.1 43 32-94 6-48 (348)
163 PLN02662 cinnamyl-alcohol dehy 97.2 0.00077 1.7E-08 62.5 6.7 36 41-94 2-37 (322)
164 PLN02986 cinnamyl-alcohol dehy 97.2 0.0009 1.9E-08 62.4 7.1 35 42-94 4-38 (322)
165 PRK07201 short chain dehydroge 97.2 0.0024 5.2E-08 65.4 10.8 90 43-165 371-460 (657)
166 PRK05650 short chain dehydroge 97.2 0.0013 2.9E-08 59.6 8.0 91 44-167 1-91 (270)
167 PRK06181 short chain dehydroge 97.2 0.0013 2.9E-08 59.1 7.9 91 44-167 2-92 (263)
168 PLN00198 anthocyanidin reducta 97.2 0.0016 3.6E-08 61.2 8.8 34 43-94 9-42 (338)
169 TIGR01829 AcAcCoA_reduct aceto 97.2 0.0017 3.7E-08 57.3 8.3 91 44-166 1-91 (242)
170 PRK07831 short chain dehydroge 97.2 0.0017 3.6E-08 58.7 8.1 91 43-165 17-109 (262)
171 KOG1205 Predicted dehydrogenas 97.2 0.00088 1.9E-08 63.0 6.4 95 38-166 9-104 (282)
172 PRK07775 short chain dehydroge 97.1 0.0016 3.4E-08 59.6 7.9 91 43-166 10-100 (274)
173 PRK07069 short chain dehydroge 97.1 0.002 4.3E-08 57.3 8.2 92 45-167 1-93 (251)
174 PRK12824 acetoacetyl-CoA reduc 97.1 0.0023 4.9E-08 56.6 8.3 91 44-166 3-93 (245)
175 PLN02653 GDP-mannose 4,6-dehyd 97.1 0.0015 3.3E-08 61.4 7.6 38 38-95 3-40 (340)
176 PRK09730 putative NAD(P)-bindi 97.1 0.0023 5.1E-08 56.5 8.3 89 44-164 2-90 (247)
177 TIGR01289 LPOR light-dependent 97.1 0.002 4.3E-08 60.5 8.2 88 43-164 3-92 (314)
178 TIGR01472 gmd GDP-mannose 4,6- 97.1 0.0015 3.2E-08 61.7 7.2 34 44-95 1-34 (343)
179 PRK08177 short chain dehydroge 97.1 0.0019 4.2E-08 57.0 7.5 33 44-94 2-34 (225)
180 PRK08217 fabG 3-ketoacyl-(acyl 97.0 0.003 6.4E-08 56.0 8.5 34 43-94 5-38 (253)
181 PRK05786 fabG 3-ketoacyl-(acyl 97.0 0.00081 1.8E-08 59.4 4.8 34 43-94 5-38 (238)
182 TIGR02622 CDP_4_6_dhtase CDP-g 97.0 0.0029 6.3E-08 59.9 8.8 33 44-94 5-37 (349)
183 smart00822 PKS_KR This enzymat 97.0 0.0041 9E-08 51.1 8.7 94 44-167 1-95 (180)
184 TIGR02632 RhaD_aldol-ADH rhamn 97.0 0.0027 5.9E-08 66.3 9.0 94 38-165 411-505 (676)
185 PLN02778 3,5-epimerase/4-reduc 97.0 0.0023 5E-08 59.9 7.6 32 42-91 8-39 (298)
186 PRK07102 short chain dehydroge 97.0 0.0023 5.1E-08 56.9 7.4 33 44-94 2-34 (243)
187 PLN02730 enoyl-[acyl-carrier-p 97.0 0.0036 7.7E-08 59.3 8.9 35 38-90 6-40 (303)
188 PRK05599 hypothetical protein; 97.0 0.003 6.6E-08 56.9 8.0 89 44-165 1-89 (246)
189 PRK08261 fabG 3-ketoacyl-(acyl 97.0 0.0033 7.2E-08 61.7 8.7 78 70-167 219-298 (450)
190 PRK12747 short chain dehydroge 96.9 0.0042 9E-08 55.6 8.5 33 43-93 4-36 (252)
191 PRK06924 short chain dehydroge 96.9 0.0061 1.3E-07 54.3 9.4 33 44-94 2-34 (251)
192 KOG1502 Flavonol reductase/cin 96.9 0.0021 4.5E-08 61.6 6.7 86 43-169 6-94 (327)
193 COG1028 FabG Dehydrogenases wi 96.9 0.0043 9.3E-08 55.3 8.4 90 43-166 5-99 (251)
194 PLN02896 cinnamyl-alcohol dehy 96.9 0.0013 2.9E-08 62.3 5.3 35 42-94 9-43 (353)
195 TIGR02685 pter_reduc_Leis pter 96.9 0.0035 7.6E-08 56.9 7.8 33 44-94 2-34 (267)
196 PLN02650 dihydroflavonol-4-red 96.9 0.0024 5.3E-08 60.4 7.0 34 43-94 5-38 (351)
197 PRK12742 oxidoreductase; Provi 96.9 0.0059 1.3E-07 53.8 8.8 35 39-93 4-38 (237)
198 PLN02989 cinnamyl-alcohol dehy 96.9 0.0027 5.8E-08 59.2 6.9 34 43-94 5-38 (325)
199 KOG1209 1-Acyl dihydroxyaceton 96.8 0.0022 4.7E-08 58.4 5.8 89 43-167 7-95 (289)
200 PRK06125 short chain dehydroge 96.8 0.003 6.5E-08 56.9 6.7 36 39-94 5-40 (259)
201 PLN02572 UDP-sulfoquinovose sy 96.8 0.005 1.1E-07 61.1 8.7 33 43-93 47-79 (442)
202 PLN02695 GDP-D-mannose-3',5'-e 96.8 0.0049 1.1E-07 59.4 8.4 39 38-94 16-54 (370)
203 PRK10217 dTDP-glucose 4,6-dehy 96.8 0.0069 1.5E-07 57.2 9.1 32 44-93 2-33 (355)
204 PLN02427 UDP-apiose/xylose syn 96.8 0.0052 1.1E-07 59.1 8.2 34 43-94 14-48 (386)
205 PRK07060 short chain dehydroge 96.7 0.0064 1.4E-07 53.8 8.1 36 39-94 7-42 (245)
206 KOG1210 Predicted 3-ketosphing 96.7 0.0035 7.6E-08 59.7 6.6 89 44-164 34-123 (331)
207 PRK08324 short chain dehydroge 96.7 0.0053 1.2E-07 64.0 8.6 91 43-167 422-512 (681)
208 TIGR03589 PseB UDP-N-acetylglu 96.7 0.0018 3.9E-08 61.1 4.6 34 43-94 4-39 (324)
209 PRK07023 short chain dehydroge 96.7 0.0085 1.8E-07 53.3 8.7 33 44-94 2-34 (243)
210 PRK08017 oxidoreductase; Provi 96.7 0.0048 1E-07 55.1 7.0 33 44-94 3-35 (256)
211 TIGR03466 HpnA hopanoid-associ 96.7 0.0072 1.6E-07 55.8 8.4 34 44-95 1-34 (328)
212 KOG0725 Reductases with broad 96.6 0.0067 1.4E-07 56.5 7.7 97 38-167 5-103 (270)
213 COG1086 Predicted nucleoside-d 96.6 0.003 6.5E-08 64.3 5.7 86 42-163 249-335 (588)
214 PRK09987 dTDP-4-dehydrorhamnos 96.6 0.0056 1.2E-07 57.0 7.1 32 44-94 1-32 (299)
215 PRK07578 short chain dehydroge 96.6 0.0091 2E-07 51.7 7.8 32 44-94 1-32 (199)
216 PF01073 3Beta_HSD: 3-beta hyd 96.6 0.0043 9.4E-08 57.8 6.2 74 70-168 6-81 (280)
217 TIGR01831 fabG_rel 3-oxoacyl-( 96.6 0.0079 1.7E-07 53.2 7.6 81 70-164 7-87 (239)
218 TIGR01830 3oxo_ACP_reduc 3-oxo 96.6 0.0079 1.7E-07 52.8 7.5 83 70-166 7-89 (239)
219 PLN02206 UDP-glucuronate decar 96.6 0.0052 1.1E-07 61.0 6.9 35 42-94 118-152 (442)
220 KOG4169 15-hydroxyprostaglandi 96.6 0.0026 5.6E-08 58.3 4.3 87 43-166 5-96 (261)
221 PRK06300 enoyl-(acyl carrier p 96.6 0.0074 1.6E-07 56.9 7.6 37 38-92 5-41 (299)
222 PRK08125 bifunctional UDP-gluc 96.5 0.0058 1.3E-07 63.5 7.2 36 42-95 314-350 (660)
223 PF13460 NAD_binding_10: NADH( 96.5 0.0091 2E-07 50.8 6.9 26 70-95 7-32 (183)
224 PLN02166 dTDP-glucose 4,6-dehy 96.5 0.0083 1.8E-07 59.5 7.6 35 42-94 119-153 (436)
225 PF08659 KR: KR domain; Inter 96.5 0.0087 1.9E-07 51.9 6.9 92 45-166 2-94 (181)
226 PRK11150 rfaD ADP-L-glycero-D- 96.5 0.0074 1.6E-07 55.8 6.7 31 46-94 2-32 (308)
227 PRK09009 C factor cell-cell si 96.4 0.013 2.8E-07 51.7 7.6 28 44-89 1-28 (235)
228 KOG1208 Dehydrogenases with di 96.4 0.012 2.5E-07 56.3 7.5 92 42-164 34-125 (314)
229 CHL00194 ycf39 Ycf39; Provisio 96.3 0.0095 2.1E-07 55.8 6.7 34 44-95 1-34 (317)
230 TIGR01214 rmlD dTDP-4-dehydror 96.3 0.011 2.3E-07 53.9 6.8 32 45-94 1-32 (287)
231 PRK11908 NAD-dependent epimera 96.3 0.007 1.5E-07 57.2 5.7 33 44-94 2-35 (347)
232 PRK08219 short chain dehydroge 96.3 0.0058 1.3E-07 53.3 4.6 32 44-94 4-35 (227)
233 PRK10675 UDP-galactose-4-epime 96.2 0.022 4.8E-07 53.2 8.7 33 44-94 1-33 (338)
234 PLN00141 Tic62-NAD(P)-related 96.2 0.01 2.3E-07 53.5 6.1 34 43-94 17-50 (251)
235 PRK06940 short chain dehydroge 96.2 0.0057 1.2E-07 56.2 4.1 85 44-164 3-87 (275)
236 COG0451 WcaG Nucleoside-diphos 96.1 0.023 5E-07 51.9 8.0 34 45-96 2-35 (314)
237 TIGR01181 dTDP_gluc_dehyt dTDP 96.1 0.013 2.8E-07 53.6 6.1 31 45-93 1-33 (317)
238 PRK12367 short chain dehydroge 96.0 0.0093 2E-07 54.3 4.9 37 38-94 11-47 (245)
239 PLN00015 protochlorophyllide r 96.0 0.018 4E-07 53.7 6.9 80 70-164 6-86 (308)
240 PF04321 RmlD_sub_bind: RmlD s 96.0 0.009 2E-07 55.7 4.7 33 44-94 1-33 (286)
241 PRK10084 dTDP-glucose 4,6 dehy 95.9 0.037 7.9E-07 52.2 8.7 30 44-91 1-30 (352)
242 PF13561 adh_short_C2: Enoyl-( 95.9 0.015 3.3E-07 51.9 5.7 82 69-166 4-86 (241)
243 PF01370 Epimerase: NAD depend 95.8 0.028 6.1E-07 49.1 7.0 33 46-96 1-33 (236)
244 PLN02780 ketoreductase/ oxidor 95.8 0.013 2.8E-07 55.5 5.2 35 42-94 52-86 (320)
245 TIGR01777 yfcH conserved hypot 95.8 0.014 3.1E-07 52.9 5.2 26 70-95 7-32 (292)
246 TIGR02197 heptose_epim ADP-L-g 95.8 0.027 5.8E-07 51.8 6.8 31 46-94 1-32 (314)
247 PLN02583 cinnamoyl-CoA reducta 95.7 0.019 4.2E-07 53.3 5.7 34 43-94 6-39 (297)
248 PLN00016 RNA-binding protein; 95.6 0.038 8.3E-07 53.1 7.3 35 43-95 52-90 (378)
249 PRK06101 short chain dehydroge 95.4 0.024 5.3E-07 50.5 5.0 33 44-94 2-34 (240)
250 PLN02260 probable rhamnose bio 95.3 0.051 1.1E-06 56.4 7.6 31 42-90 379-409 (668)
251 TIGR01500 sepiapter_red sepiap 95.3 0.059 1.3E-06 48.5 7.1 32 45-94 2-37 (256)
252 PRK07041 short chain dehydroge 95.2 0.056 1.2E-06 47.4 6.6 25 70-94 6-30 (230)
253 PRK09291 short chain dehydroge 95.2 0.031 6.8E-07 49.8 5.1 33 44-94 3-35 (257)
254 TIGR01179 galE UDP-glucose-4-e 95.0 0.1 2.2E-06 47.8 8.1 31 45-93 1-31 (328)
255 PRK12320 hypothetical protein; 95.0 0.06 1.3E-06 56.7 7.1 33 44-94 1-33 (699)
256 COG1091 RfbD dTDP-4-dehydrorha 95.0 0.056 1.2E-06 50.9 6.2 31 45-94 2-32 (281)
257 PRK07201 short chain dehydroge 94.9 0.09 2E-06 53.9 8.0 33 44-94 1-35 (657)
258 PRK08309 short chain dehydroge 94.9 0.17 3.7E-06 44.2 8.5 155 44-238 1-171 (177)
259 PLN02686 cinnamoyl-CoA reducta 94.8 0.045 9.8E-07 52.7 5.4 35 42-94 52-86 (367)
260 PLN02240 UDP-glucose 4-epimera 94.8 0.049 1.1E-06 51.1 5.5 33 44-94 6-38 (352)
261 PRK07424 bifunctional sterol d 94.8 0.051 1.1E-06 53.7 5.6 34 43-94 178-211 (406)
262 PRK05865 hypothetical protein; 94.8 0.095 2.1E-06 56.4 8.0 33 44-94 1-33 (854)
263 PLN02260 probable rhamnose bio 94.7 0.13 2.8E-06 53.4 8.6 33 43-93 6-40 (668)
264 PRK05884 short chain dehydroge 94.7 0.051 1.1E-06 48.3 4.9 32 45-94 2-33 (223)
265 PRK14982 acyl-ACP reductase; P 94.6 0.15 3.2E-06 49.3 8.2 36 38-93 152-189 (340)
266 PLN02214 cinnamoyl-CoA reducta 94.5 0.062 1.3E-06 51.0 5.4 34 43-94 10-43 (342)
267 PLN02725 GDP-4-keto-6-deoxyman 94.4 0.066 1.4E-06 49.0 5.2 23 70-92 6-28 (306)
268 PLN03209 translocon at the inn 94.3 0.067 1.4E-06 55.1 5.4 35 42-94 79-113 (576)
269 PLN02657 3,8-divinyl protochlo 94.2 0.077 1.7E-06 51.7 5.5 36 42-95 59-94 (390)
270 COG1087 GalE UDP-glucose 4-epi 94.0 0.2 4.4E-06 47.8 7.4 34 44-95 1-34 (329)
271 PRK06953 short chain dehydroge 93.8 0.09 2E-06 46.2 4.6 33 44-94 2-34 (222)
272 PF02719 Polysacc_synt_2: Poly 93.8 0.14 3.1E-06 48.5 6.1 30 46-93 1-31 (293)
273 KOG1200 Mitochondrial/plastidi 93.6 0.22 4.7E-06 45.1 6.6 86 44-164 15-101 (256)
274 COG0623 FabI Enoyl-[acyl-carri 93.4 0.13 2.8E-06 47.4 4.8 90 38-165 3-96 (259)
275 COG3967 DltE Short-chain dehyd 93.3 0.29 6.2E-06 44.6 6.9 84 43-164 5-89 (245)
276 TIGR02813 omega_3_PfaA polyket 93.1 0.24 5.3E-06 59.0 7.8 25 70-94 2006-2031(2582)
277 cd01078 NAD_bind_H4MPT_DH NADP 93.1 0.35 7.6E-06 42.2 7.1 152 26-225 12-169 (194)
278 TIGR03649 ergot_EASG ergot alk 93.1 0.13 2.8E-06 47.0 4.5 33 45-95 1-33 (285)
279 PRK14175 bifunctional 5,10-met 92.8 1 2.2E-05 42.6 10.1 54 18-94 138-191 (286)
280 KOG1014 17 beta-hydroxysteroid 92.4 0.5 1.1E-05 45.1 7.5 118 42-199 48-170 (312)
281 PLN02996 fatty acyl-CoA reduct 91.8 0.3 6.5E-06 49.2 5.7 35 43-95 11-48 (491)
282 COG2910 Putative NADH-flavin r 91.7 0.35 7.5E-06 43.3 5.2 28 70-97 9-36 (211)
283 PF03033 Glyco_transf_28: Glyc 91.6 0.13 2.9E-06 41.7 2.4 35 46-94 1-35 (139)
284 PRK12446 undecaprenyldiphospho 91.0 0.23 5.1E-06 47.7 3.8 39 44-96 2-40 (352)
285 PRK14194 bifunctional 5,10-met 90.9 1.2 2.6E-05 42.4 8.5 54 18-94 139-192 (301)
286 KOG1430 C-3 sterol dehydrogena 90.7 1.1 2.4E-05 43.8 8.1 34 43-94 4-39 (361)
287 KOG1199 Short-chain alcohol de 90.2 1.2 2.7E-05 39.6 7.2 85 44-164 10-94 (260)
288 PRK00258 aroE shikimate 5-dehy 89.6 9.1 0.0002 35.5 13.1 25 70-94 131-156 (278)
289 PRK14191 bifunctional 5,10-met 89.6 4.2 9E-05 38.5 10.7 53 18-93 137-189 (285)
290 TIGR01746 Thioester-redct thio 89.4 0.53 1.1E-05 43.7 4.7 33 45-95 1-35 (367)
291 KOG1207 Diacetyl reductase/L-x 89.4 0.86 1.9E-05 40.7 5.6 88 38-168 4-92 (245)
292 PRK14188 bifunctional 5,10-met 89.3 1.7 3.8E-05 41.2 8.1 54 18-94 138-191 (296)
293 PF05368 NmrA: NmrA-like famil 89.2 0.57 1.2E-05 41.5 4.5 26 70-95 7-32 (233)
294 COG0702 Predicted nucleoside-d 89.1 0.59 1.3E-05 41.7 4.6 35 44-96 1-35 (275)
295 cd01075 NAD_bind_Leu_Phe_Val_D 88.8 2.2 4.7E-05 37.9 7.9 35 37-92 24-58 (200)
296 PRK06719 precorrin-2 dehydroge 88.5 0.82 1.8E-05 39.1 4.8 34 38-92 10-43 (157)
297 PRK06718 precorrin-2 dehydroge 87.8 0.9 2E-05 40.5 4.9 35 38-93 7-41 (202)
298 PRK14176 bifunctional 5,10-met 87.8 4 8.7E-05 38.7 9.4 54 18-94 144-197 (287)
299 PF02882 THF_DHG_CYH_C: Tetrah 87.7 2.2 4.8E-05 36.9 7.0 53 19-94 17-69 (160)
300 COG1249 Lpd Pyruvate/2-oxoglut 87.6 1.4 3E-05 44.3 6.5 54 44-99 137-210 (454)
301 PRK14106 murD UDP-N-acetylmura 87.4 0.95 2.1E-05 44.5 5.2 33 43-94 5-37 (450)
302 cd01336 MDH_cytoplasmic_cytoso 87.4 1.3 2.8E-05 42.4 5.9 34 44-95 3-43 (325)
303 cd01080 NAD_bind_m-THF_DH_Cycl 87.4 2.1 4.5E-05 37.3 6.7 52 19-94 25-77 (168)
304 COG1090 Predicted nucleoside-d 87.4 0.7 1.5E-05 43.7 4.0 26 70-95 7-32 (297)
305 COG1089 Gmd GDP-D-mannose dehy 87.3 2.7 5.9E-05 40.1 7.8 37 43-97 2-38 (345)
306 KOG1371 UDP-glucose 4-epimeras 87.3 0.67 1.5E-05 44.6 3.9 34 43-94 2-35 (343)
307 PF07993 NAD_binding_4: Male s 87.1 1.1 2.5E-05 40.4 5.2 26 70-95 5-32 (249)
308 PRK14179 bifunctional 5,10-met 87.1 2.2 4.8E-05 40.3 7.2 61 11-94 129-191 (284)
309 PRK14186 bifunctional 5,10-met 86.5 6.5 0.00014 37.5 10.0 54 18-94 138-191 (297)
310 PRK14183 bifunctional 5,10-met 86.5 6.2 0.00013 37.3 9.8 61 11-94 128-190 (281)
311 PRK06849 hypothetical protein; 86.4 1.3 2.7E-05 43.0 5.3 34 43-94 4-37 (389)
312 PRK14177 bifunctional 5,10-met 86.3 7 0.00015 37.0 10.1 54 18-94 139-192 (284)
313 PF13241 NAD_binding_7: Putati 86.2 0.88 1.9E-05 35.9 3.5 36 38-94 4-39 (103)
314 PRK14170 bifunctional 5,10-met 86.1 5.8 0.00013 37.5 9.4 54 18-94 137-190 (284)
315 PRK14173 bifunctional 5,10-met 85.8 6.1 0.00013 37.5 9.4 54 18-94 135-188 (287)
316 PRK14169 bifunctional 5,10-met 85.6 7.8 0.00017 36.6 10.0 54 18-94 136-189 (282)
317 PRK14180 bifunctional 5,10-met 85.0 7.2 0.00016 36.9 9.5 54 18-94 138-191 (282)
318 PRK14166 bifunctional 5,10-met 84.9 6.8 0.00015 37.0 9.3 54 18-94 137-190 (282)
319 PF00070 Pyr_redox: Pyridine n 84.8 3.3 7.1E-05 30.7 5.8 28 70-97 7-34 (80)
320 cd01079 NAD_bind_m-THF_DH NAD 84.6 14 0.00031 33.1 10.7 57 18-95 33-96 (197)
321 PRK14172 bifunctional 5,10-met 84.1 8.2 0.00018 36.4 9.4 54 18-94 138-191 (278)
322 TIGR01915 npdG NADPH-dependent 83.4 2.2 4.8E-05 38.0 5.2 25 70-94 9-33 (219)
323 PRK14178 bifunctional 5,10-met 83.2 11 0.00024 35.6 9.9 54 18-94 132-185 (279)
324 PRK14171 bifunctional 5,10-met 83.2 11 0.00023 35.8 9.8 54 18-94 139-192 (288)
325 TIGR01133 murG undecaprenyldip 82.9 1.7 3.7E-05 40.3 4.4 38 44-95 1-38 (348)
326 PRK14190 bifunctional 5,10-met 82.9 11 0.00024 35.6 9.8 54 18-94 138-191 (284)
327 PRK14182 bifunctional 5,10-met 82.3 14 0.00031 34.9 10.2 54 18-94 137-190 (282)
328 PRK14187 bifunctional 5,10-met 82.1 11 0.00023 36.0 9.3 54 18-94 140-193 (294)
329 COG3320 Putative dehydrogenase 81.8 3.1 6.8E-05 40.8 5.8 35 44-96 1-36 (382)
330 PLN02516 methylenetetrahydrofo 81.8 9.5 0.00021 36.4 8.9 54 18-94 147-200 (299)
331 PRK02472 murD UDP-N-acetylmura 81.8 2.2 4.8E-05 41.9 4.9 32 43-93 5-36 (447)
332 KOG1429 dTDP-glucose 4-6-dehyd 81.6 2.5 5.4E-05 40.4 4.9 35 42-94 26-60 (350)
333 PF02737 3HCDH_N: 3-hydroxyacy 81.1 1.8 3.8E-05 37.8 3.6 25 70-94 7-31 (180)
334 PLN02616 tetrahydrofolate dehy 80.7 9.4 0.0002 37.4 8.6 54 18-94 211-264 (364)
335 PRK14193 bifunctional 5,10-met 80.5 16 0.00035 34.6 9.9 54 18-94 138-193 (284)
336 PF12242 Eno-Rase_NADH_b: NAD( 80.4 3.8 8.2E-05 31.4 4.6 63 11-93 8-72 (78)
337 PRK06444 prephenate dehydrogen 79.3 2.7 5.8E-05 37.6 4.1 21 70-90 9-29 (197)
338 TIGR01470 cysG_Nterm siroheme 79.3 3.9 8.4E-05 36.5 5.2 36 38-94 6-41 (205)
339 PF03807 F420_oxidored: NADP o 78.7 3.2 6.9E-05 31.5 3.9 25 70-94 7-34 (96)
340 KOG1372 GDP-mannose 4,6 dehydr 78.0 2.7 5.9E-05 39.5 3.8 37 42-96 27-63 (376)
341 PRK14189 bifunctional 5,10-met 77.8 16 0.00035 34.6 9.1 54 18-94 138-191 (285)
342 PLN02897 tetrahydrofolate dehy 77.8 11 0.00024 36.7 8.1 54 18-94 194-247 (345)
343 cd05212 NAD_bind_m-THF_DH_Cycl 77.7 10 0.00023 31.9 7.1 54 18-94 8-61 (140)
344 PRK14181 bifunctional 5,10-met 77.6 22 0.00048 33.7 9.9 54 18-94 133-190 (287)
345 PRK10792 bifunctional 5,10-met 76.8 11 0.00024 35.6 7.7 54 18-94 139-192 (285)
346 PRK11199 tyrA bifunctional cho 76.7 3.6 7.8E-05 40.1 4.5 34 43-94 98-131 (374)
347 PRK14167 bifunctional 5,10-met 76.7 23 0.0005 33.7 9.8 54 18-94 137-194 (297)
348 PRK14185 bifunctional 5,10-met 75.6 22 0.00049 33.8 9.4 54 18-94 137-194 (293)
349 PRK14168 bifunctional 5,10-met 75.5 25 0.00054 33.5 9.7 54 18-94 141-198 (297)
350 PRK12428 3-alpha-hydroxysteroi 74.4 4.1 8.9E-05 36.3 4.0 18 77-94 1-18 (241)
351 cd00704 MDH Malate dehydrogena 74.4 7.5 0.00016 37.2 6.0 25 70-94 9-40 (323)
352 TIGR00715 precor6x_red precorr 74.2 4.8 0.0001 37.4 4.5 69 184-256 152-233 (256)
353 PF01210 NAD_Gly3P_dh_N: NAD-d 73.8 3.2 6.9E-05 35.1 3.0 25 70-94 7-31 (157)
354 PRK12548 shikimate 5-dehydroge 73.7 5.7 0.00012 37.2 4.9 25 70-94 134-159 (289)
355 PRK07819 3-hydroxybutyryl-CoA 72.9 4.8 0.0001 37.6 4.2 25 70-94 13-37 (286)
356 PF03853 YjeF_N: YjeF-related 72.9 14 0.00031 31.7 6.9 36 43-93 25-60 (169)
357 cd03785 GT1_MurG MurG is an N- 72.6 5.7 0.00012 36.8 4.6 38 45-96 1-38 (350)
358 PF03446 NAD_binding_2: NAD bi 72.4 5.1 0.00011 34.0 3.9 24 70-93 9-32 (163)
359 PRK14192 bifunctional 5,10-met 72.0 14 0.0003 34.9 7.0 53 19-94 140-192 (283)
360 PRK08655 prephenate dehydrogen 71.9 6.5 0.00014 39.2 5.1 25 70-94 9-33 (437)
361 PLN02503 fatty acyl-CoA reduct 70.4 6 0.00013 41.3 4.6 34 43-94 119-155 (605)
362 KOG1252 Cystathionine beta-syn 70.0 15 0.00033 35.7 6.9 26 69-94 111-136 (362)
363 PLN02520 bifunctional 3-dehydr 69.9 14 0.00031 37.7 7.2 32 43-93 379-410 (529)
364 PRK01438 murD UDP-N-acetylmura 69.1 11 0.00023 37.6 5.9 32 44-94 17-48 (480)
365 COG1157 FliI Flagellar biosynt 69.0 7.3 0.00016 38.9 4.6 58 29-94 204-261 (441)
366 cd00674 LysRS_core_class_I cat 68.7 15 0.00033 35.7 6.7 49 44-97 19-67 (353)
367 TIGR02853 spore_dpaA dipicolin 68.7 11 0.00023 35.5 5.5 36 38-94 148-183 (287)
368 PRK07066 3-hydroxybutyryl-CoA 67.5 7.5 0.00016 37.3 4.3 25 70-94 15-39 (321)
369 cd01065 NAD_bind_Shikimate_DH 67.4 12 0.00027 30.7 5.1 24 70-93 27-51 (155)
370 PLN03050 pyridoxine (pyridoxam 67.4 10 0.00023 34.9 5.1 34 44-92 61-94 (246)
371 COG2085 Predicted dinucleotide 67.0 6.3 0.00014 35.8 3.5 161 70-243 9-182 (211)
372 PF01113 DapB_N: Dihydrodipico 67.0 12 0.00026 30.5 4.9 32 63-94 2-34 (124)
373 COG0569 TrkA K+ transport syst 65.6 6.5 0.00014 35.5 3.3 26 70-95 8-33 (225)
374 PRK06129 3-hydroxyacyl-CoA deh 65.1 7.2 0.00016 36.6 3.6 25 70-94 10-34 (308)
375 cd02010 TPP_ALS Thiamine pyrop 64.1 21 0.00045 30.8 6.1 52 44-96 15-77 (177)
376 PRK14569 D-alanyl-alanine synt 64.0 11 0.00024 35.1 4.7 39 44-93 5-43 (296)
377 cd01132 F1_ATPase_alpha F1 ATP 63.9 19 0.00041 33.9 6.1 43 44-94 127-169 (274)
378 PRK00726 murG undecaprenyldiph 63.4 12 0.00026 35.1 4.8 39 44-96 2-40 (357)
379 COG0529 CysC Adenylylsulfate k 63.3 26 0.00056 31.4 6.5 73 70-168 34-108 (197)
380 cd08259 Zn_ADH5 Alcohol dehydr 62.6 15 0.00032 33.6 5.2 33 43-93 163-195 (332)
381 TIGR00507 aroE shikimate 5-deh 62.6 15 0.00032 33.8 5.2 25 70-94 125-149 (270)
382 cd08295 double_bond_reductase_ 62.2 15 0.00033 34.2 5.3 35 42-94 151-185 (338)
383 cd06449 ACCD Aminocyclopropane 62.1 14 0.00031 34.6 5.1 36 44-95 52-87 (307)
384 PRK14619 NAD(P)H-dependent gly 61.7 9.4 0.0002 35.8 3.7 25 70-94 12-36 (308)
385 PRK14174 bifunctional 5,10-met 61.5 77 0.0017 30.2 9.8 54 18-94 139-196 (295)
386 TIGR00467 lysS_arch lysyl-tRNA 61.5 27 0.00058 35.8 7.2 51 44-99 18-68 (515)
387 cd08253 zeta_crystallin Zeta-c 61.4 16 0.00035 32.7 5.2 34 43-94 145-178 (325)
388 KOG1431 GDP-L-fucose synthetas 61.3 21 0.00045 33.4 5.7 25 44-86 2-26 (315)
389 PRK04308 murD UDP-N-acetylmura 61.3 16 0.00034 36.0 5.4 32 44-94 6-37 (445)
390 PF01488 Shikimate_DH: Shikima 61.2 19 0.00041 29.6 5.1 24 70-93 20-44 (135)
391 PF13738 Pyr_redox_3: Pyridine 60.6 15 0.00032 31.3 4.5 24 71-94 176-199 (203)
392 TIGR02824 quinone_pig3 putativ 60.5 41 0.0009 30.1 7.7 34 43-94 140-173 (325)
393 PRK06115 dihydrolipoamide dehy 60.5 25 0.00054 34.9 6.7 56 44-99 138-211 (466)
394 KOG1478 3-keto sterol reductas 60.4 42 0.0009 31.9 7.6 30 138-167 74-103 (341)
395 KOG2304 3-hydroxyacyl-CoA dehy 60.4 6.7 0.00015 36.4 2.4 35 61-95 10-44 (298)
396 PRK12390 1-aminocyclopropane-1 60.4 15 0.00033 34.9 5.0 26 69-94 76-101 (337)
397 PRK14618 NAD(P)H-dependent gly 60.2 10 0.00022 35.8 3.7 25 70-94 12-36 (328)
398 TIGR00215 lpxB lipid-A-disacch 60.2 7.8 0.00017 37.6 3.0 37 44-95 6-42 (385)
399 PLN02545 3-hydroxybutyryl-CoA 60.0 10 0.00022 35.2 3.6 25 70-94 12-36 (295)
400 COG1088 RfbB dTDP-D-glucose 4, 60.0 46 0.001 32.1 7.9 114 44-203 1-116 (340)
401 PRK09260 3-hydroxybutyryl-CoA 59.8 9.7 0.00021 35.3 3.4 25 70-94 9-33 (288)
402 PF02558 ApbA: Ketopantoate re 59.5 12 0.00025 30.8 3.5 26 70-95 6-31 (151)
403 PRK12831 putative oxidoreducta 59.4 16 0.00035 36.5 5.1 34 43-95 281-314 (464)
404 PRK08293 3-hydroxybutyryl-CoA 59.4 11 0.00023 35.0 3.7 25 70-94 11-35 (287)
405 COG2894 MinD Septum formation 59.3 11 0.00025 34.8 3.6 34 44-95 3-41 (272)
406 TIGR02825 B4_12hDH leukotriene 59.2 19 0.00041 33.3 5.3 35 42-94 138-172 (325)
407 COG0373 HemA Glutamyl-tRNA red 59.0 47 0.001 33.1 8.2 59 16-95 152-211 (414)
408 cd05276 p53_inducible_oxidored 59.0 19 0.0004 32.2 5.1 34 43-94 140-173 (323)
409 COG0707 MurG UDP-N-acetylgluco 58.9 12 0.00025 36.5 3.9 35 44-92 1-36 (357)
410 PRK15116 sulfur acceptor prote 58.8 17 0.00036 34.1 4.8 26 70-95 38-64 (268)
411 PRK00711 D-amino acid dehydrog 58.8 17 0.00037 34.9 5.1 24 71-94 9-32 (416)
412 PRK04148 hypothetical protein; 58.5 25 0.00054 29.6 5.3 23 70-93 25-47 (134)
413 PRK11259 solA N-methyltryptoph 58.2 16 0.00034 34.5 4.7 24 71-94 12-35 (376)
414 PLN00106 malate dehydrogenase 58.0 50 0.0011 31.7 8.0 34 43-94 18-53 (323)
415 PRK14031 glutamate dehydrogena 57.7 37 0.00081 34.2 7.3 48 25-93 211-259 (444)
416 PRK06035 3-hydroxyacyl-CoA deh 57.7 14 0.00031 34.2 4.2 25 70-94 11-35 (291)
417 PRK09288 purT phosphoribosylgl 57.6 19 0.00042 34.5 5.2 34 42-94 11-44 (395)
418 PF00670 AdoHcyase_NAD: S-aden 57.5 43 0.00093 29.1 6.8 24 70-93 31-54 (162)
419 TIGR02279 PaaC-3OHAcCoADH 3-hy 57.4 11 0.00025 38.2 3.7 25 70-94 13-37 (503)
420 COG0031 CysK Cysteine synthase 57.3 36 0.00078 32.5 6.8 27 68-94 68-94 (300)
421 cd02006 TPP_Gcl Thiamine pyrop 57.3 42 0.00091 29.4 6.9 70 20-97 8-87 (202)
422 COG1250 FadB 3-hydroxyacyl-CoA 56.9 9.4 0.0002 36.5 2.8 25 70-94 11-35 (307)
423 TIGR01041 ATP_syn_B_arch ATP s 56.4 22 0.00048 35.9 5.5 43 44-94 203-246 (458)
424 PRK06130 3-hydroxybutyryl-CoA 56.2 17 0.00037 33.9 4.4 25 70-94 12-36 (311)
425 PRK06522 2-dehydropantoate 2-r 56.1 13 0.00029 34.1 3.7 25 70-94 8-32 (304)
426 PF00208 ELFV_dehydrog: Glutam 55.9 28 0.0006 32.0 5.7 24 70-93 40-63 (244)
427 PRK06370 mercuric reductase; V 55.8 24 0.00052 34.9 5.7 30 70-99 179-208 (463)
428 PLN02618 tryptophan synthase, 55.7 21 0.00046 35.5 5.2 27 70-96 128-154 (410)
429 cd08294 leukotriene_B4_DH_like 55.6 24 0.00052 32.3 5.3 34 43-94 144-177 (329)
430 TIGR01274 ACC_deam 1-aminocycl 55.5 20 0.00044 34.1 4.9 35 44-94 66-100 (337)
431 PRK13802 bifunctional indole-3 55.4 18 0.00039 38.4 4.9 27 70-96 388-414 (695)
432 cd01135 V_A-ATPase_B V/A-type 55.2 22 0.00047 33.6 4.9 43 44-94 131-174 (276)
433 cd08268 MDR2 Medium chain dehy 55.1 24 0.00052 31.7 5.2 34 43-94 145-178 (328)
434 COG1648 CysG Siroheme synthase 55.0 22 0.00049 32.0 4.8 37 38-95 9-45 (210)
435 PRK09754 phenylpropionate diox 55.0 24 0.00051 34.1 5.3 26 71-96 153-178 (396)
436 PRK05562 precorrin-2 dehydroge 54.7 24 0.00053 32.2 5.0 34 42-94 24-57 (223)
437 PRK00094 gpsA NAD(P)H-dependen 54.4 15 0.00033 34.1 3.8 25 70-94 9-33 (325)
438 PRK12409 D-amino acid dehydrog 54.2 21 0.00046 34.3 4.9 25 70-94 9-33 (410)
439 PRK00750 lysK lysyl-tRNA synth 54.2 40 0.00087 34.4 7.0 51 44-99 23-73 (510)
440 PRK06249 2-dehydropantoate 2-r 54.1 24 0.00053 33.0 5.2 25 70-94 13-37 (313)
441 TIGR01316 gltA glutamate synth 54.0 23 0.0005 35.1 5.2 25 71-95 281-305 (449)
442 cd08266 Zn_ADH_like1 Alcohol d 54.0 60 0.0013 29.4 7.6 34 43-94 167-200 (342)
443 PRK05808 3-hydroxybutyryl-CoA 53.9 14 0.0003 34.1 3.4 24 70-93 11-34 (282)
444 cd01449 TST_Repeat_2 Thiosulfa 53.9 56 0.0012 25.4 6.6 24 70-93 87-111 (118)
445 cd01133 F1-ATPase_beta F1 ATP 53.5 28 0.00061 32.8 5.4 43 44-94 128-171 (274)
446 TIGR01505 tartro_sem_red 2-hyd 53.4 14 0.00031 34.1 3.4 25 70-94 7-31 (291)
447 PRK06467 dihydrolipoamide dehy 53.1 26 0.00057 34.9 5.4 30 70-99 182-211 (471)
448 PRK14620 NAD(P)H-dependent gly 53.0 16 0.00034 34.4 3.7 25 70-94 8-32 (326)
449 cd05288 PGDH Prostaglandin deh 52.9 27 0.00058 32.0 5.2 34 43-94 146-179 (329)
450 PRK06416 dihydrolipoamide dehy 52.8 28 0.00062 34.2 5.6 30 70-99 180-209 (462)
451 TIGR02437 FadB fatty oxidation 52.7 15 0.00033 38.9 3.9 35 60-94 311-345 (714)
452 cd08292 ETR_like_2 2-enoyl thi 52.5 28 0.0006 31.7 5.2 34 43-94 140-173 (324)
453 PRK07417 arogenate dehydrogena 52.4 17 0.00037 33.6 3.7 25 70-94 8-32 (279)
454 PRK04196 V-type ATP synthase s 52.3 29 0.00063 35.0 5.6 43 44-94 205-248 (460)
455 PLN03049 pyridoxine (pyridoxam 52.3 24 0.00052 35.6 5.0 35 44-93 60-94 (462)
456 TIGR01692 HIBADH 3-hydroxyisob 52.1 16 0.00035 33.8 3.6 25 70-94 4-28 (288)
457 cd02002 TPP_BFDC Thiamine pyro 52.1 51 0.0011 27.9 6.4 35 61-96 40-78 (178)
458 PRK13512 coenzyme A disulfide 52.0 25 0.00054 34.6 5.0 27 71-97 157-183 (438)
459 PRK07530 3-hydroxybutyryl-CoA 52.0 22 0.00048 32.9 4.5 25 70-94 12-36 (292)
460 PRK08268 3-hydroxy-acyl-CoA de 52.0 19 0.00041 36.6 4.3 25 70-94 15-39 (507)
461 PRK08229 2-dehydropantoate 2-r 51.9 15 0.00033 34.5 3.4 25 70-94 10-34 (341)
462 PRK12266 glpD glycerol-3-phosp 51.8 20 0.00044 36.2 4.5 24 71-94 15-38 (508)
463 PLN03154 putative allyl alcoho 51.6 27 0.00059 33.1 5.1 34 43-94 159-192 (348)
464 PRK06936 type III secretion sy 51.5 20 0.00044 35.9 4.3 43 44-94 218-260 (439)
465 TIGR01421 gluta_reduc_1 glutat 51.5 29 0.00063 34.4 5.5 27 70-96 174-200 (450)
466 PRK07846 mycothione reductase; 51.2 31 0.00068 34.2 5.6 28 70-97 174-201 (451)
467 PRK05249 soluble pyridine nucl 51.1 32 0.00069 33.8 5.7 30 70-99 183-212 (461)
468 cd05188 MDR Medium chain reduc 51.1 29 0.00063 30.3 4.9 33 43-94 135-167 (271)
469 COG0190 FolD 5,10-methylene-te 51.0 48 0.001 31.5 6.5 56 17-95 135-190 (283)
470 cd05211 NAD_bind_Glu_Leu_Phe_V 50.7 66 0.0014 29.0 7.2 25 70-94 31-55 (217)
471 KOG1198 Zinc-binding oxidoredu 50.6 1.5E+02 0.0033 28.6 10.1 35 42-94 157-192 (347)
472 PRK08972 fliI flagellum-specif 50.5 25 0.00054 35.4 4.8 43 44-94 218-260 (444)
473 TIGR01275 ACC_deam_rel pyridox 50.3 26 0.00056 32.8 4.7 36 44-95 56-91 (311)
474 PRK03910 D-cysteine desulfhydr 50.2 27 0.00059 33.1 4.9 27 69-95 73-99 (331)
475 TIGR03324 alt_F1F0_F1_al alter 50.1 29 0.00062 35.5 5.2 43 44-94 220-262 (497)
476 PRK05922 type III secretion sy 49.9 19 0.0004 36.2 3.8 43 44-94 213-255 (434)
477 PRK09281 F0F1 ATP synthase sub 49.8 30 0.00065 35.3 5.3 43 44-94 220-262 (502)
478 TIGR03498 FliI_clade3 flagella 49.7 28 0.0006 34.8 4.9 43 44-94 196-238 (418)
479 PF02826 2-Hacid_dh_C: D-isome 49.6 42 0.00091 28.8 5.5 26 70-95 44-69 (178)
480 COG4821 Uncharacterized protei 49.5 41 0.00088 30.7 5.5 53 23-93 87-139 (243)
481 COG0446 HcaD Uncharacterized N 49.4 31 0.00067 32.4 5.1 27 71-97 145-171 (415)
482 PRK15461 NADH-dependent gamma- 49.4 19 0.00041 33.7 3.6 25 70-94 9-33 (296)
483 PRK11101 glpA sn-glycerol-3-ph 49.3 23 0.0005 36.2 4.4 24 71-94 15-38 (546)
484 cd08293 PTGR2 Prostaglandin re 49.2 31 0.00067 32.0 5.0 34 43-94 155-189 (345)
485 cd08242 MDR_like Medium chain 49.2 32 0.0007 31.5 5.1 33 43-94 156-188 (319)
486 PRK04965 NADH:flavorubredoxin 49.1 35 0.00076 32.6 5.5 26 71-96 150-175 (377)
487 PRK13343 F0F1 ATP synthase sub 49.1 33 0.00072 35.1 5.5 43 44-94 220-262 (502)
488 cd02013 TPP_Xsc_like Thiamine 48.7 67 0.0014 28.1 6.8 69 19-96 3-82 (196)
489 PRK07531 bifunctional 3-hydrox 48.6 18 0.0004 36.5 3.6 25 70-94 12-36 (495)
490 cd05289 MDR_like_2 alcohol deh 48.5 37 0.0008 30.2 5.2 34 43-94 145-178 (309)
491 cd01134 V_A-ATPase_A V/A-type 48.4 17 0.00037 35.7 3.2 25 70-94 238-262 (369)
492 cd08248 RTN4I1 Human Reticulon 48.4 36 0.00078 31.5 5.3 33 43-93 163-195 (350)
493 CHL00059 atpA ATP synthase CF1 48.4 24 0.00051 36.0 4.3 43 44-94 199-241 (485)
494 TIGR03496 FliI_clade1 flagella 47.8 39 0.00085 33.6 5.7 43 44-94 193-235 (411)
495 PRK13369 glycerol-3-phosphate 47.7 25 0.00054 35.4 4.3 24 71-94 15-38 (502)
496 PF10686 DUF2493: Protein of u 47.6 51 0.0011 24.5 5.0 38 43-94 3-40 (71)
497 cd08289 MDR_yhfp_like Yhfp put 47.6 37 0.00079 31.0 5.2 34 43-94 147-180 (326)
498 PF13344 Hydrolase_6: Haloacid 47.4 17 0.00037 28.5 2.5 27 61-88 32-58 (101)
499 PRK08644 thiamine biosynthesis 47.4 37 0.00081 30.3 5.0 57 17-94 2-61 (212)
500 PRK09310 aroDE bifunctional 3- 47.4 59 0.0013 32.8 7.0 24 70-93 340-363 (477)
No 1
>KOG2728 consensus Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase [General function prediction only]
Probab=100.00 E-value=1.7e-61 Score=433.47 Aligned_cols=275 Identities=47% Similarity=0.723 Sum_probs=242.1
Q ss_pred hhccCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEE
Q 022803 12 FFDSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFL 91 (292)
Q Consensus 12 ~~~~~~~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i 91 (292)
||..++.++.+++....+++|+..+.++.| +|.||||||||.+||+.|+||||+|||+|.+|++.||+|++.||.|+|+
T Consensus 1 ~~~~~p~p~~~~d~~s~~~eFi~~q~s~~~-rrIVlVTSGGTtVPLE~ntVRFiDNFSaGtRGAaSAE~Fl~agYaVIFl 79 (302)
T KOG2728|consen 1 FFEMNPVPESLDDPGSLIEEFIKLQASLQG-RRIVLVTSGGTTVPLEQNTVRFIDNFSAGTRGAASAEYFLAAGYAVIFL 79 (302)
T ss_pred CCCcCCCcccccchhHHHHHHHHHHhhccC-ceEEEEecCCeEeecccCceEeeeccCcCCccchhHHHHHhCCceEEEE
Confidence 688899999999888788999988766665 6799999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCCccCCCCCccchhhhhcccccc---eEEeec------------------cc--ccc-cchhHHHHHHHHHHHH
Q 022803 92 YRRGTCEPYCSSLPDDAFLECFEVTEESA---VQGSSR------------------RP--SVE-ASLYNYIRMLQMIAVS 147 (292)
Q Consensus 92 ~g~~~~~P~~~~l~~~~~~~~~~~~~~~~---i~v~~~------------------~~--a~~-~tv~dy~~m~~~i~~~ 147 (292)
|+..|+.||+|++|.+.+...+...+... +.-... .+ ++. ||+.||.+++++++++
T Consensus 80 ~R~~Sl~Py~R~f~~~~~~~~l~~~g~~~~~~i~~~e~~~~vf~~~~~~~k~~~k~~~lL~vpFtT~~~Yl~~L~aiae~ 159 (302)
T KOG2728|consen 80 YRERSLFPYTRHFPGQTWFLFLRPSGSALSGLIEKEENALPVFAEALEKYKYAEKAGTLLYVPFTTLADYLWLLRAIAEA 159 (302)
T ss_pred eeccccccccccCCCchhhhhhccCCcccccceecCchhhHHHHHHHHHHHHHHhhCcEEEEecchHHHHHHHHHHHHHH
Confidence 99999999999999766666665533222 100000 00 111 9999999999999999
Q ss_pred HhhcCCCceEEEeecccCCcCCccccccccccCCCCCceEEEEeCcchhHHHhhccCCCeEEEEEeeccCcHHHHHHHHH
Q 022803 148 SRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLEKADM 227 (292)
Q Consensus 148 l~~~~~~d~~i~aAAVsDf~v~~~~~~~~KI~s~~~~l~l~L~~~PkIl~~i~~~~~p~~~lVgFklEt~~e~l~~~A~~ 227 (292)
++.++...++++|||||||+||+..+++|||+|+++.|.|+|.++||+|+.+...|.|++++|+||||||+..||.+|+.
T Consensus 160 Ln~~~sramfYLAAAVSDFyVP~~~mpeHKIqSg~~~l~i~l~~VPK~L~~Lv~~WaP~AfiiSFKLETDesiLi~KAr~ 239 (302)
T KOG2728|consen 160 LNPLGSRAMFYLAAAVSDFYVPESEMPEHKIQSGSGPLQITLKPVPKMLSPLVSDWAPKAFIISFKLETDESILINKARK 239 (302)
T ss_pred hccccchHHHHHHHHhcccccChhhcchhhcccCCCCceEEeccchHHHHHHHHhhCcceEEEEEEecCChHHHHHHHHH
Confidence 99999999999999999999999999999999998899999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCEEEEeccCCCCcEEEEEeCCCee--eecCCCCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 022803 228 ARKKYGMHAVVANELLSRKEQVVVVTNNGKI--PVYRDKTSSDSDVEKPLTKLLVDRHSVYIKDSN 291 (292)
Q Consensus 228 kL~~k~~D~VvaN~l~~~~n~v~li~~~~~~--~~~~~~k~~k~~ia~~Iv~~i~~~~~~~~~~~~ 291 (292)
.|++|++.+||||.+++++.+|++++++-.. ++...+ ..|++-|++.+.++|.+||.++.
T Consensus 240 AL~kY~HqlVIAN~LsTRk~~V~fVt~~~~~~~~l~~~~----~~IE~~ii~~vv~rH~~~I~~a~ 301 (302)
T KOG2728|consen 240 ALEKYKHQLVIANLLSTRKSRVVFVTKNIVQWLELDKAP----GAIEDSIIKLVVSRHKEFIDEAQ 301 (302)
T ss_pred HHHHhCceeeeeehhhhcceeEEEEecCcceeeeccccc----chhHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999976544 333333 56999999999999999999864
No 2
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=100.00 E-value=6.1e-57 Score=443.72 Aligned_cols=231 Identities=23% Similarity=0.323 Sum_probs=195.5
Q ss_pred hhccCCCCCCHHHHHHHHHHHHhcC--CCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEE
Q 022803 12 FFDSAPPLNDRAAISQKLKEFIALN--SSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVI 89 (292)
Q Consensus 12 ~~~~~~~~~~~~~i~~~~~~~l~~~--~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~ 89 (292)
+..+.|||++|++|+..+.+++..+ ++|+| |+||||+|||+|||| |||||||+|||+||++||++|+.+||+|+
T Consensus 225 g~~G~Grm~e~~~I~~~v~~~~~~~~~~~l~g--kkvLITaGpT~E~ID--pVR~ItN~SSGkmG~alA~aa~~~GA~Vt 300 (475)
T PRK13982 225 GEAGVGRMAEPLEIAAAAEALLRPPQPKPLAG--RRVLITAGPTHEPID--PVRYIANRSSGKQGFAIAAAAAAAGAEVT 300 (475)
T ss_pred CCcCCCCCCCHHHHHHHHHHHHhhccccccCC--CEEEEecCCccccCC--cceeeCCCCchHHHHHHHHHHHHCCCcEE
Confidence 4568999999999999999998653 46866 999999999999999 99999999999999999999999999999
Q ss_pred EEeeCCCCCCccCCCCCccchhhhhcccccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCcCC
Q 022803 90 FLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFYVP 169 (292)
Q Consensus 90 ~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~v~ 169 (292)
||+|+.+..| | .+++++++++| .+|++++. +.++ +|++|||||||||++
T Consensus 301 lI~Gp~~~~~-----p-------------~~v~~i~V~ta--------~eM~~av~---~~~~-~Di~I~aAAVaDyrp- 349 (475)
T PRK13982 301 LISGPVDLAD-----P-------------QGVKVIHVESA--------RQMLAAVE---AALP-ADIAIFAAAVADWRV- 349 (475)
T ss_pred EEeCCcCCCC-----C-------------CCceEEEecCH--------HHHHHHHH---hhCC-CCEEEEeccccceee-
Confidence 9999876432 2 23455555544 78998874 3344 799999999999996
Q ss_pred ccccccccccCCC-CCceEEEEeCcchhHHHhhcc-CCCeEEEEEeeccCcHHHHHHHHHHHHHhCCCEEEEeccC----
Q 022803 170 WKSMAEHKIQSGS-GPLDMQLLQVPKMLSVLRKEW-APMAFCISFKLETDAEILLEKADMARKKYGMHAVVANELL---- 243 (292)
Q Consensus 170 ~~~~~~~KI~s~~-~~l~l~L~~~PkIl~~i~~~~-~p~~~lVgFklEt~~e~l~~~A~~kL~~k~~D~VvaN~l~---- 243 (292)
....++||||++ +.++|+|++|||||+.|++.+ .+.+++|||||||++ |+++|++||++|||||||||+++
T Consensus 350 -~~~~~~KiKk~~~~~~~L~L~~nPDIL~~l~~~~~~~~~~lVGFaaEt~~--l~~~A~~KL~~K~~D~IvaN~v~~~~~ 426 (475)
T PRK13982 350 -ATEGGQKLKKGAAGPPPLQLVENPDILATISKLAENRPPLVIGFAAETEH--LIDNARAKLARKGCDWIVANDVSPATG 426 (475)
T ss_pred -ccccccccCcCCCCCceeeeeeCcHHHHHHhhhcccCCCEEEEEccCchh--HHHHHHHHHHHcCCCEEEEccCCcCCC
Confidence 567899999863 457999999999999999642 223689999999976 99999999999999999999995
Q ss_pred ---CCCcEEEEEeCCCe----eeecCCCCCChHHHHHHHHHHHHHHH
Q 022803 244 ---SRKEQVVVVTNNGK----IPVYRDKTSSDSDVEKPLTKLLVDRH 283 (292)
Q Consensus 244 ---~~~n~v~li~~~~~----~~~~~~~k~~k~~ia~~Iv~~i~~~~ 283 (292)
.++|+++|++++|. +.++.++ |.+||++|+++|.++.
T Consensus 427 gfg~d~n~v~ii~~~g~~~~~~~~~~~s---K~~iA~~Il~~i~~~~ 470 (475)
T PRK13982 427 VMGGDRNTVHLLSRDGDAEKVESWPVMT---KDEVATALVARIASTF 470 (475)
T ss_pred CcCCCccEEEEEECCCCccceeEcCCCC---HHHHHHHHHHHHHHHh
Confidence 26899999999873 4677777 5999999999997643
No 3
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=100.00 E-value=2e-55 Score=386.97 Aligned_cols=175 Identities=33% Similarity=0.471 Sum_probs=135.9
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
||+||||||||+|||| |||||||+|||+||++||++|+.+||+|+||+|+.+..| | ..+.
T Consensus 3 gk~vlITaG~T~E~iD--~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~-----p-------------~~~~ 62 (185)
T PF04127_consen 3 GKKVLITAGPTREPID--PVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPP-----P-------------PGVK 62 (185)
T ss_dssp T-EEEEEESB-EEESS--SSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----------------------TTEE
T ss_pred CCEEEEECCCccccCC--CceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccc-----c-------------ccce
Confidence 4999999999999999 999999999999999999999999999999999976432 2 2345
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCcCCccccccccccC-CCCCceEEEEeCcchhHHHhh
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQS-GSGPLDMQLLQVPKMLSVLRK 201 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~v~~~~~~~~KI~s-~~~~l~l~L~~~PkIl~~i~~ 201 (292)
++.+.++ .+|++++. +.++.+|++|||||||||+| +...++||+| +++.++|+|++|||||+.|++
T Consensus 63 ~i~v~sa--------~em~~~~~---~~~~~~Di~I~aAAVsDf~p--~~~~~~KIkK~~~~~l~l~L~~~pkIL~~l~~ 129 (185)
T PF04127_consen 63 VIRVESA--------EEMLEAVK---ELLPSADIIIMAAAVSDFRP--EEPAEGKIKKSSGDELTLELKPTPKILAELRK 129 (185)
T ss_dssp EEE-SSH--------HHHHHHHH---HHGGGGSEEEE-SB--SEEE--SCHHSS-G---TT-CEEEEEEE-GGHGCCHHH
T ss_pred EEEecch--------hhhhhhhc---cccCcceeEEEecchhheee--hhccccccccccCcceEEEEEeChHHHHHHHh
Confidence 5555443 78888764 44677899999999999996 5678999996 456799999999999999987
Q ss_pred ccCCCeEEEEEeeccCcHHHHHHHHHHHHHhCCCEEEEeccCC-------CCcEEEEE
Q 022803 202 EWAPMAFCISFKLETDAEILLEKADMARKKYGMHAVVANELLS-------RKEQVVVV 252 (292)
Q Consensus 202 ~~~p~~~lVgFklEt~~e~l~~~A~~kL~~k~~D~VvaN~l~~-------~~n~v~li 252 (292)
.|.|++++|||||||+ +++++|++||++||||+||||+++. +.|+++|+
T Consensus 130 ~~~~~~~lVGFkaEt~--~l~~~A~~kl~~k~~D~IVaN~~~~~~~gfg~~~n~~~ii 185 (185)
T PF04127_consen 130 NKKPNQFLVGFKAETE--ELIENAKEKLERKGADLIVANDLSQRGSGFGSDTNEVTII 185 (185)
T ss_dssp HCSTTTEEEEEEEESC--HHHHHHHHHHHHCT-SEEEEEEGCCCTSSSSSSEEEEEE-
T ss_pred cccCCcEEEEEEecCC--cHHHHHHHHhHhhCCCEEEEeCCCcCCCCcCCCceEEEEC
Confidence 8889999999999996 5999999999999999999999985 57999885
No 4
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=100.00 E-value=2.1e-52 Score=405.74 Aligned_cols=232 Identities=24% Similarity=0.336 Sum_probs=193.9
Q ss_pred hhhccCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEE
Q 022803 11 SFFDSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIF 90 (292)
Q Consensus 11 ~~~~~~~~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~ 90 (292)
.+..+.|||++|++|+..+.+++.+ .+++| |+||||+|||+|||| |||||||+|||+||.+||++|+++||+|++
T Consensus 159 ~~~~g~gr~~~~~~I~~~~~~~~~~-~~l~g--k~vlITgG~T~E~ID--~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~ 233 (399)
T PRK05579 159 CGDVGPGRMAEPEEIVAAAERALSP-KDLAG--KRVLITAGPTREPID--PVRYITNRSSGKMGYALARAAARRGADVTL 233 (399)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHhhh-cccCC--CEEEEeCCCcccccc--ceeeeccCCcchHHHHHHHHHHHCCCEEEE
Confidence 3455889999999999999998864 46765 999999999999999 999999999999999999999999999999
Q ss_pred EeeCCCCCCccCCCCCccchhhhhcccccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCcCCc
Q 022803 91 LYRRGTCEPYCSSLPDDAFLECFEVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPW 170 (292)
Q Consensus 91 i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~v~~ 170 (292)
++|+.+..+ | .++ ..++|. + ..+|.+++. +.++..|++||+|||+||++
T Consensus 234 v~~~~~~~~-----~--~~~--------~~~dv~---~--------~~~~~~~v~---~~~~~~DilI~~Aav~d~~~-- 282 (399)
T PRK05579 234 VSGPVNLPT-----P--AGV--------KRIDVE---S--------AQEMLDAVL---AALPQADIFIMAAAVADYRP-- 282 (399)
T ss_pred eCCCccccC-----C--CCc--------EEEccC---C--------HHHHHHHHH---HhcCCCCEEEEccccccccc--
Confidence 999764321 1 011 122332 1 267777763 45788999999999999995
Q ss_pred cccccccccCCCCCceEEEEeCcchhHHHhhccCCCeEEEEEeeccCcHHHHHHHHHHHHHhCCCEEEEeccC------C
Q 022803 171 KSMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLEKADMARKKYGMHAVVANELL------S 244 (292)
Q Consensus 171 ~~~~~~KI~s~~~~l~l~L~~~PkIl~~i~~~~~p~~~lVgFklEt~~e~l~~~A~~kL~~k~~D~VvaN~l~------~ 244 (292)
....++||||+.+.++|+|++|||||+.|++.+.+.+++|||||||++ ++++|++||++|||||||||+++ .
T Consensus 283 ~~~~~~Kikk~~~~~~l~L~~~pdIl~~l~~~~~~~~~~VGFaaEt~~--~~~~A~~kl~~k~~D~ivaN~i~~~~~fg~ 360 (399)
T PRK05579 283 ATVAEGKIKKGEGELTLELVPNPDILAEVAALKDKRPFVVGFAAETGD--VLEYARAKLKRKGLDLIVANDVSAGGGFGS 360 (399)
T ss_pred ccccccCccCCCCCceEEEEeCcHHHHHHHhccCCCCEEEEEccCCch--HHHHHHHHHHHcCCeEEEEecCCcCCCcCC
Confidence 567899999975569999999999999999765333489999999987 89999999999999999999994 3
Q ss_pred CCcEEEEEeCCCe-eeecCCCCCChHHHHHHHHHHHHHHH
Q 022803 245 RKEQVVVVTNNGK-IPVYRDKTSSDSDVEKPLTKLLVDRH 283 (292)
Q Consensus 245 ~~n~v~li~~~~~-~~~~~~~k~~k~~ia~~Iv~~i~~~~ 283 (292)
++|+++|++++|. ..++..+ |.+||++|++++.++.
T Consensus 361 ~~n~~~ii~~~~~~~~~~~~~---K~~iA~~i~~~i~~~~ 397 (399)
T PRK05579 361 DDNEVTLIWSDGGEVKLPLMS---KLELARRLLDEIAERL 397 (399)
T ss_pred CceEEEEEECCCcEEEcCCCC---HHHHHHHHHHHHHHHh
Confidence 7899999999875 4677778 5999999999997654
No 5
>PRK09620 hypothetical protein; Provisional
Probab=100.00 E-value=7.2e-52 Score=375.42 Aligned_cols=209 Identities=24% Similarity=0.265 Sum_probs=165.2
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
||+||||||||+|||| |||||||+|||+||++||++|+++||+|++++|+.+..|.. ++ ..+.
T Consensus 3 gk~vlITaG~T~E~iD--~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~--~~-------------~~~~ 65 (229)
T PRK09620 3 GKKVLITSGGCLEKWD--QVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPND--IN-------------NQLE 65 (229)
T ss_pred CCEEEEeCCCccCCcC--CeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcc--cC-------------Ccee
Confidence 4999999999999999 99999999999999999999999999999999986533321 11 1222
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCcCCccc-------cccccccCCCCCceEEEEeCcch
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKS-------MAEHKIQSGSGPLDMQLLQVPKM 195 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~v~~~~-------~~~~KI~s~~~~l~l~L~~~PkI 195 (292)
+..++++ .+|.+++.+.+. ....|++||+||||||+|+... ..++||+|+ +.++|+|++||||
T Consensus 66 ~~~V~s~--------~d~~~~l~~~~~-~~~~D~VIH~AAvsD~~~~~~~~~~~~~~~~~~Ki~~~-~~~~l~L~~~pdI 135 (229)
T PRK09620 66 LHPFEGI--------IDLQDKMKSIIT-HEKVDAVIMAAAGSDWVVDKICDQEGNVLDMNGKISSD-IAPIIHFQKAPKV 135 (229)
T ss_pred EEEEecH--------HHHHHHHHHHhc-ccCCCEEEECccccceecccccccccccccccCCCcCC-CCCeEEEEECcHH
Confidence 2222221 456665544332 1357999999999999974211 023489885 4689999999999
Q ss_pred hHHHhhccCCCeEEEEEeeccCc--HHHHHHHHHHHHHhCCCEEEEeccCC---CCcEEEEEeCCCeeeecCCCCCChHH
Q 022803 196 LSVLRKEWAPMAFCISFKLETDA--EILLEKADMARKKYGMHAVVANELLS---RKEQVVVVTNNGKIPVYRDKTSSDSD 270 (292)
Q Consensus 196 l~~i~~~~~p~~~lVgFklEt~~--e~l~~~A~~kL~~k~~D~VvaN~l~~---~~n~v~li~~~~~~~~~~~~k~~k~~ 270 (292)
|+.+++ |.|++++|||||||+. ++|+++|++||++|+|||||||+++. ..++++|+++++.. .+.++ |.+
T Consensus 136 l~~l~~-~~~~~~~vGFkaEt~~~~~~l~~~A~~kl~~k~~D~ivaN~~~~~~g~~~~~~ii~~~~~~-~~~~~---K~~ 210 (229)
T PRK09620 136 LKQIKQ-WDPETVLVGFKLESDVNEEELFERAKNRMEEAKASVMIANSPHSLYSRGAMHYVIGQDGKG-QLCNG---KDE 210 (229)
T ss_pred HHHHHh-hCCCCEEEEEEeccCCCHHHHHHHHHHHHHHcCCCEEEECCcccccCCCcEEEEEeCCCcc-ccCCC---HHH
Confidence 999985 6688899999999994 78999999999999999999999953 44689999998764 35666 599
Q ss_pred HHHHHHHHHHHHH
Q 022803 271 VEKPLTKLLVDRH 283 (292)
Q Consensus 271 ia~~Iv~~i~~~~ 283 (292)
||+.|++++.++.
T Consensus 211 iA~~i~~~i~~~~ 223 (229)
T PRK09620 211 TAKEIVKRLEVLC 223 (229)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998753
No 6
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=100.00 E-value=2.1e-51 Score=397.59 Aligned_cols=227 Identities=24% Similarity=0.321 Sum_probs=192.1
Q ss_pred ccCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEee
Q 022803 14 DSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
.+.++|+++++|+..+.+.+....+++| |+||||+|||+|||| |||||||+|||+||.+||++|+.+||+|++++|
T Consensus 158 ~g~g~~~~~~~i~~~v~~~~~~~~~~~~--~~vlit~g~t~E~iD--~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g 233 (390)
T TIGR00521 158 EGKGRLAEPETIVKAAEREFSPKEDLEG--KRVLITAGPTREPID--PVRFISNLSSGKMGLALAEAAYKRGADVTLITG 233 (390)
T ss_pred ccCCCCCCHHHHHHHHHHHHhhccccCC--ceEEEecCCccCCCC--ceeeecCCCcchHHHHHHHHHHHCCCEEEEeCC
Confidence 4688999999999999998876446866 999999999999999 999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCccchhhhhcccccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCcCCcccc
Q 022803 94 RGTCEPYCSSLPDDAFLECFEVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSM 173 (292)
Q Consensus 94 ~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~v~~~~~ 173 (292)
+.+..| | .++ ..++|.+ ..+|++++.+ ..++..|++|+||||+||++ ...
T Consensus 234 ~~~~~~-----~--~~~--------~~~~v~~-----------~~~~~~~~~~--~~~~~~D~~i~~Aavsd~~~--~~~ 283 (390)
T TIGR00521 234 PVSLLT-----P--PGV--------KSIKVST-----------AEEMLEAALN--ELAKDFDIFISAAAVADFKP--KTV 283 (390)
T ss_pred CCccCC-----C--CCc--------EEEEecc-----------HHHHHHHHHH--hhcccCCEEEEccccccccc--ccc
Confidence 875422 2 111 1233421 2677665532 23567899999999999996 456
Q ss_pred ccccccCCCCCceEEEEeCcchhHHHhhccCCCeEEEEEeeccCcHHHHHHHHHHHHHhCCCEEEEeccCC-----CCcE
Q 022803 174 AEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLEKADMARKKYGMHAVVANELLS-----RKEQ 248 (292)
Q Consensus 174 ~~~KI~s~~~~l~l~L~~~PkIl~~i~~~~~p~~~lVgFklEt~~e~l~~~A~~kL~~k~~D~VvaN~l~~-----~~n~ 248 (292)
.++||+|.++.++|+|.+|||||+.|++.| |++++|||||||+.+ ++++|++||++|+||+||||+++. ++|+
T Consensus 284 ~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~-~~~~lvgF~aEt~~~-l~~~A~~kl~~k~~D~ivaN~i~~~~fg~~~n~ 361 (390)
T TIGR00521 284 FEGKIKKQGEELSLKLVKNPDIIAEVRKIK-KHQVIVGFKAETNDD-LIKYAKEKLKKKNLDMIVANDVSQRGFGSDENE 361 (390)
T ss_pred ccccccccCCceeEEEEeCcHHHHHHHhhC-CCcEEEEEEcCCCcH-HHHHHHHHHHHcCCCEEEEccCCccccCCCCcE
Confidence 789999965679999999999999999765 568999999999866 999999999999999999999974 7899
Q ss_pred EEEEeCCCeeeecCCCCCChHHHHHHHHHHH
Q 022803 249 VVVVTNNGKIPVYRDKTSSDSDVEKPLTKLL 279 (292)
Q Consensus 249 v~li~~~~~~~~~~~~k~~k~~ia~~Iv~~i 279 (292)
++|++++|.+.++.++ |.+||++|+++|
T Consensus 362 ~~li~~~~~~~~~~~~---K~~iA~~i~~~~ 389 (390)
T TIGR00521 362 VYIFSKHGHKELPLMS---KLEVAERILDEI 389 (390)
T ss_pred EEEEECCCeEEeCCCC---HHHHHHHHHHHh
Confidence 9999999877888888 499999999986
No 7
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=100.00 E-value=4.7e-49 Score=356.77 Aligned_cols=203 Identities=24% Similarity=0.319 Sum_probs=165.5
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
++||||||||+|||| |||||||+|||+||.+||++|+++||+|++++|+....|.. + ..+.+
T Consensus 1 ~~vliT~G~T~e~iD--~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~~---~-------------~~v~~ 62 (229)
T PRK06732 1 MKILITSGGTTEPID--SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPEP---H-------------PNLSI 62 (229)
T ss_pred CEEEEcCCCcccccC--CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccCCC---C-------------CCeEE
Confidence 489999999999999 99999999999999999999999999999999875433310 1 12333
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCcCCcc------------------ccccccccCCCCCc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWK------------------SMAEHKIQSGSGPL 185 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~v~~~------------------~~~~~KI~s~~~~l 185 (292)
....++ .+|.+.+. +.++..|++||+||++||.+... ..+++||||+.+.+
T Consensus 63 i~v~s~--------~~m~~~l~---~~~~~~DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~Ki~~~~~~~ 131 (229)
T PRK06732 63 IEIENV--------DDLLETLE---PLVKDHDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLTKQNTEAKISSASDYQ 131 (229)
T ss_pred EEEecH--------HHHHHHHH---HHhcCCCEEEeCCccCCceehhhhhhhhhhhhhhhhhhhccccccCCccCCCCce
Confidence 322111 45666553 33567899999999999985211 12489999986679
Q ss_pred eEEEEeCcchhHHHhhccCCCeEEEEEeeccC--cHHHHHHHHHHHHHhCCCEEEEeccCC---CCcEEEEEeCCCeeee
Q 022803 186 DMQLLQVPKMLSVLRKEWAPMAFCISFKLETD--AEILLEKADMARKKYGMHAVVANELLS---RKEQVVVVTNNGKIPV 260 (292)
Q Consensus 186 ~l~L~~~PkIl~~i~~~~~p~~~lVgFklEt~--~e~l~~~A~~kL~~k~~D~VvaN~l~~---~~n~v~li~~~~~~~~ 260 (292)
+|+|++|||||+.+++ |.|++++|||||||+ .++|+++|++||++|||||||||+++. +.|+++|+++++. .
T Consensus 132 ~l~l~~~p~il~~~~~-~~~~~~~vgF~~e~~~~~~~l~~~a~~kl~~~~~d~vvaN~~~~~~~~~~~~~~i~~~~~--~ 208 (229)
T PRK06732 132 VLFLKKTPKVISYVKK-WNPNITLVGFKLLVNVSKEELIKVARASLIKNQADYILANDLTDISADQHKALLVSKNEV--Y 208 (229)
T ss_pred EEEEEEChHHHHHHHh-hCCCcEEEEEEeccCCCHHHHHHHHHHHHHHcCCCEEEEecccccCCCCcEEEEEeCCCe--e
Confidence 9999999999999996 678889999999997 377999999999999999999999975 7899999999985 3
Q ss_pred cCCCCCChHHHHHHHHHHHHH
Q 022803 261 YRDKTSSDSDVEKPLTKLLVD 281 (292)
Q Consensus 261 ~~~~k~~k~~ia~~Iv~~i~~ 281 (292)
+.++ |.+||+.|++++..
T Consensus 209 ~~~~---K~~~a~~i~~~~~~ 226 (229)
T PRK06732 209 TAQT---KEEIADLLLERIEK 226 (229)
T ss_pred eCCC---HHHHHHHHHHHHHh
Confidence 5566 59999999999875
No 8
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=100.00 E-value=4.1e-47 Score=343.71 Aligned_cols=201 Identities=24% Similarity=0.349 Sum_probs=164.1
Q ss_pred eEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEEe
Q 022803 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQGS 124 (292)
Q Consensus 45 ~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v~ 124 (292)
+||||||||+|||| |||||||+|||+||.+||++|+++||+|++++++....|. + ...+++.
T Consensus 1 ~vliT~G~T~e~iD--~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l~~~----~------------~~~~Dv~ 62 (227)
T TIGR02114 1 KILVTSGGTSEPID--SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRALKPE----P------------HPNLSIR 62 (227)
T ss_pred CEEEccCCccCCCC--CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhhcccc----c------------CCcceee
Confidence 59999999999999 9999999999999999999999999999999875432221 0 0123443
Q ss_pred ecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCcCCcccc-------------------ccccccCCCCCc
Q 022803 125 SRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSM-------------------AEHKIQSGSGPL 185 (292)
Q Consensus 125 ~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~v~~~~~-------------------~~~KI~s~~~~l 185 (292)
... ...+|.+.+ .+.++..|++||+||++||.+- ... .++||||+.+.+
T Consensus 63 d~~--------s~~~l~~~v---~~~~g~iDiLVnnAgv~d~~~~-~~~s~e~~~~~~~~~~~~~~~~~~~Ki~~~~~~~ 130 (227)
T TIGR02114 63 EIE--------TTKDLLITL---KELVQEHDILIHSMAVSDYTPV-YMTDLEQVQASDNLNEFLSKQNHEAKISSTSEYQ 130 (227)
T ss_pred cHH--------HHHHHHHHH---HHHcCCCCEEEECCEeccccch-hhCCHHHHhhhcchhhhhccccccCCcccCCCce
Confidence 331 224555543 5567889999999999999852 222 379999976679
Q ss_pred eEEEEeCcchhHHHhhccCCCeEEEEEeeccC--cHHHHHHHHHHHHHhCCCEEEEeccC---CCCcEEEEEeCCCeeee
Q 022803 186 DMQLLQVPKMLSVLRKEWAPMAFCISFKLETD--AEILLEKADMARKKYGMHAVVANELL---SRKEQVVVVTNNGKIPV 260 (292)
Q Consensus 186 ~l~L~~~PkIl~~i~~~~~p~~~lVgFklEt~--~e~l~~~A~~kL~~k~~D~VvaN~l~---~~~n~v~li~~~~~~~~ 260 (292)
+|+|++|||||+.+++ |.|++++||||||++ .++|+++|++||++|||||||||+++ .+.|+++|+++++. +
T Consensus 131 ~l~l~~~p~il~~~~~-~~~~~~~vgF~~e~~~~~~~l~~~a~~kl~~~~~d~ivaN~~~~~~~~~~~~~li~~~~~--~ 207 (227)
T TIGR02114 131 VLFLKKTPKVISLVKE-WNPQIHLVGFKLLVNVTQEELVKVARASLIKNQADFILANDLTDISADQHKALLIEKNQV--Q 207 (227)
T ss_pred eEEEEEChHHHHHHHh-hCCCcEEEEEEeccCCCHHHHHHHHHHHHHHcCCCEEEEcchhhcCCCCceEEEEeCCCe--e
Confidence 9999999999999995 568889999999987 37799999999999999999999995 48999999999973 4
Q ss_pred cCCCCCChHHHHHHHHHHHHH
Q 022803 261 YRDKTSSDSDVEKPLTKLLVD 281 (292)
Q Consensus 261 ~~~~k~~k~~ia~~Iv~~i~~ 281 (292)
+..+ |.+||+.|+++|..
T Consensus 208 ~~~~---k~~ia~~i~~~~~~ 225 (227)
T TIGR02114 208 TAQT---KEEIAELLYEKVQK 225 (227)
T ss_pred ecCC---HHHHHHHHHHHHHh
Confidence 5566 59999999999854
No 9
>COG0452 Dfp Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism]
Probab=100.00 E-value=2.5e-43 Score=341.51 Aligned_cols=228 Identities=22% Similarity=0.335 Sum_probs=196.3
Q ss_pred cCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 15 SAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 15 ~~~~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.+|++++++|+..+.+++..+ ++.| |+||||+|||+|+|| |||||||+|||+||++||++++++||+|++++|+
T Consensus 158 g~g~~~e~~~Iv~~~~~~~~~~-~l~g--k~Vlit~G~t~E~id--pvr~itn~ssGk~g~alA~a~~~~GA~V~lv~g~ 232 (392)
T COG0452 158 GDGRLAEPEEIVEAALALLKTP-DLKG--KKVLITAGPTREYID--PVRFISNRSSGKMGFALAAAAKRRGASVTLVSGP 232 (392)
T ss_pred ccccCCCHHHHHHHHHhhcccc-cccC--cEEEecCCCCccCCc--cceeeeccccccccHHHHHHHHHcCCceEEecCC
Confidence 4589999999999999999776 6765 999999999999999 9999999999999999999999999999999997
Q ss_pred CCCCCccCCCCCccchhhhhcccccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCcCCccccc
Q 022803 95 GTCEPYCSSLPDDAFLECFEVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMA 174 (292)
Q Consensus 95 ~~~~P~~~~l~~~~~~~~~~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~v~~~~~~ 174 (292)
++..+ | .+++ .+.+. ++ .+|.+++ +.....+|++|++|||+||++ ...+
T Consensus 233 ~~~~~-----p--~~v~--------~v~v~---sa--------~em~~av---~~~~~~~d~~i~~aAvaD~~~--~~~~ 281 (392)
T COG0452 233 TSLKI-----P--AGVE--------VVKVE---SA--------EEMLNAV---LEAALPADIFISAAAVADYRP--KWVA 281 (392)
T ss_pred CcCCC-----C--Ccce--------eeeee---eH--------HHHHHHH---HhcccccCEEEEecccccccc--cccc
Confidence 66432 1 1211 22333 33 7899886 355677999999999999996 5688
Q ss_pred cccccCCCCCceEEEEeCcchhHHHhhccCCCeEEEEEeeccCcHHHHHHHHHHHHHhCCCEEEEeccC-----CCCcEE
Q 022803 175 EHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLEKADMARKKYGMHAVVANELL-----SRKEQV 249 (292)
Q Consensus 175 ~~KI~s~~~~l~l~L~~~PkIl~~i~~~~~p~~~lVgFklEt~~e~l~~~A~~kL~~k~~D~VvaN~l~-----~~~n~v 249 (292)
++||+|..+.+.|+|.+|||||..++..+.+..++|||++|++. ++++|++||++|++|+||+|+++ ++.|++
T Consensus 282 ~~Kikk~~~~~~l~l~~n~dil~~~~~~~~~~~~~Vgfaaet~~--~~~~a~~kl~~k~~D~i~aNdv~~~~fg~d~n~~ 359 (392)
T COG0452 282 EAKIKKQGEPFKLELVPNPDILASVARDYPKKNILVGFAAETGD--IVEYAREKLERKNLDLIVANDVSEIGFGSDDNEV 359 (392)
T ss_pred ccceeecCCcceEEeccChhHHHHHHhhccCCCeEEEEeccchH--HHHHHHHhhhhcCCCeEEeccccccCCCCCccce
Confidence 99999976679999999999999999865443389999999998 99999999999999999999998 378999
Q ss_pred EEEeCCCe-eeecCCCCCChHHHHHHHHHHHHHHH
Q 022803 250 VVVTNNGK-IPVYRDKTSSDSDVEKPLTKLLVDRH 283 (292)
Q Consensus 250 ~li~~~~~-~~~~~~~k~~k~~ia~~Iv~~i~~~~ 283 (292)
++++++|. ..++.++| .++|+.|++++.+++
T Consensus 360 ~~~~~d~~~~~~~~~~k---~~~a~~i~~~i~~~~ 391 (392)
T COG0452 360 RIIDKDGEDVELPEMSK---EELAERILDEIAELL 391 (392)
T ss_pred EEecCCCCeeeccccCH---HHHHHHHHHHHHHhh
Confidence 99999876 68888885 999999999998765
No 10
>PRK06398 aldose dehydrogenase; Validated
Probab=98.03 E-value=1.8e-05 Score=71.74 Aligned_cols=84 Identities=21% Similarity=0.180 Sum_probs=58.4
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
+++| |+||||+| ||..|.++|+.|++.|+.|+++.+...... .+..
T Consensus 3 ~l~g--k~vlItGa------------------s~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~---------~~~~----- 48 (258)
T PRK06398 3 GLKD--KVAIVTGG------------------SQGIGKAVVNRLKEEGSNVINFDIKEPSYN---------DVDY----- 48 (258)
T ss_pred CCCC--CEEEEECC------------------CchHHHHHHHHHHHCCCeEEEEeCCccccC---------ceEE-----
Confidence 3545 99999999 999999999999999999998876422100 0000
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
..+++. +..++.+++.++.+.++..|++||+|++..+.
T Consensus 49 -~~~D~~-----------~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~ 86 (258)
T PRK06398 49 -FKVDVS-----------NKEQVIKGIDYVISKYGRIDILVNNAGIESYG 86 (258)
T ss_pred -EEccCC-----------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 112232 23455555655667788899999999987554
No 11
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.95 E-value=4.3e-05 Score=69.26 Aligned_cols=84 Identities=21% Similarity=0.161 Sum_probs=58.6
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+++||||+| ||.+|.++|+.|+++|+.|+.+.+...... + ...+.+ ..++
T Consensus 4 ~~~vlVtGa------------------sg~iG~~~a~~l~~~g~~V~~~~r~~~~~~-----~-~~~~~~------~~~D 53 (270)
T PRK06179 4 SKVALVTGA------------------SSGIGRATAEKLARAGYRVFGTSRNPARAA-----P-IPGVEL------LELD 53 (270)
T ss_pred CCEEEEecC------------------CCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----c-cCCCee------EEee
Confidence 389999999 999999999999999999998887522110 0 001110 1123
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
+. |..++.+++..+.+.++..|++|++|+++.+.
T Consensus 54 ~~-----------d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~ 87 (270)
T PRK06179 54 VT-----------DDASVQAAVDEVIARAGRIDVLVNNAGVGLAG 87 (270)
T ss_pred cC-----------CHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc
Confidence 32 33566666666667788999999999997654
No 12
>PRK05717 oxidoreductase; Validated
Probab=97.93 E-value=2.4e-05 Score=70.44 Aligned_cols=91 Identities=18% Similarity=0.147 Sum_probs=58.0
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
+++| |+||||+| +|..|.++|+.|+++|+.|+++..... +. . .....+
T Consensus 7 ~~~~--k~vlItG~------------------sg~IG~~~a~~l~~~g~~v~~~~~~~~--~~----~--~~~~~~---- 54 (255)
T PRK05717 7 GHNG--RVALVTGA------------------ARGIGLGIAAWLIAEGWQVVLADLDRE--RG----S--KVAKAL---- 54 (255)
T ss_pred ccCC--CEEEEeCC------------------cchHHHHHHHHHHHcCCEEEEEcCCHH--HH----H--HHHHHc----
Confidence 5655 99999999 999999999999999999999865311 00 0 000000
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
...+..... .+.+..++.+++.+..+.++..|++||+|++.+.
T Consensus 55 ~~~~~~~~~------Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~ 97 (255)
T PRK05717 55 GENAWFIAM------DVADEAQVAAGVAEVLGQFGRLDALVCNAAIADP 97 (255)
T ss_pred CCceEEEEc------cCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccC
Confidence 011111111 1123355555555566667889999999998753
No 13
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.90 E-value=4.7e-05 Score=67.81 Aligned_cols=91 Identities=13% Similarity=0.090 Sum_probs=60.1
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+| ||..|.++|+.|+++|+.|+++.+...... ...+-+. ....+.
T Consensus 5 ~k~~lItG~------------------sg~iG~~la~~l~~~G~~v~~~~r~~~~~~--------~~~~~~~--~~~~~~ 56 (252)
T PRK06138 5 GRVAIVTGA------------------GSGIGRATAKLFAREGARVVVADRDAEAAE--------RVAAAIA--AGGRAF 56 (252)
T ss_pred CcEEEEeCC------------------CchHHHHHHHHHHHCCCeEEEecCCHHHHH--------HHHHHHh--cCCeEE
Confidence 399999999 999999999999999999999987532100 0000000 001122
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
+.. -.+.++..+.+.+..+.+.++..|++||+|++++..
T Consensus 57 ~~~------~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~ 95 (252)
T PRK06138 57 ARQ------GDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGG 95 (252)
T ss_pred EEE------cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 211 122244666666666677778999999999987654
No 14
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.88 E-value=4.1e-05 Score=68.54 Aligned_cols=92 Identities=22% Similarity=0.230 Sum_probs=58.0
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
+++| |+||||+| ||..|.++|+.|+++|+.|+++.+..........+.
T Consensus 12 ~~~~--k~vlItGa------------------s~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~------------ 59 (255)
T PRK06841 12 DLSG--KVAVVTGG------------------ASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLL------------ 59 (255)
T ss_pred CCCC--CEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhh------------
Confidence 3545 99999999 999999999999999999998887422100000000
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
...+..... .+.+..++.+.+..+.+.++..|++||+|++.++.
T Consensus 60 ~~~~~~~~~------Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~ 103 (255)
T PRK06841 60 GGNAKGLVC------DVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLA 103 (255)
T ss_pred CCceEEEEe------cCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 011111111 11133445555545556677899999999997654
No 15
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.87 E-value=8.9e-05 Score=66.58 Aligned_cols=85 Identities=18% Similarity=0.207 Sum_probs=56.8
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccc
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEE 118 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~ 118 (292)
++| |++|||+| ||..|.++|+.|+++|+.|+++.+..... .. .
T Consensus 4 ~~~--k~~lItGa------------------s~gIG~~la~~l~~~g~~v~~~~r~~~~~-----~~------------~ 46 (252)
T PRK07856 4 LTG--RVVLVTGG------------------TRGIGAGIARAFLAAGATVVVCGRRAPET-----VD------------G 46 (252)
T ss_pred CCC--CEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCChhhh-----hc------------C
Confidence 444 99999999 99999999999999999999998753210 00 0
Q ss_pred cceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 119 SAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 119 ~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
..+.+... .+.+..++.+.+..+.+.++..|++||+|++...
T Consensus 47 ~~~~~~~~------D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 88 (252)
T PRK07856 47 RPAEFHAA------DVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPY 88 (252)
T ss_pred CceEEEEc------cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 11111111 1112244555555556667889999999998654
No 16
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.87 E-value=0.00011 Score=66.23 Aligned_cols=101 Identities=19% Similarity=0.104 Sum_probs=61.8
Q ss_pred HHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccch
Q 022803 31 EFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFL 110 (292)
Q Consensus 31 ~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~ 110 (292)
+|+..-.++.| |+||||+| ||..|.++|+.|++.|+.|+++.+.... + ...
T Consensus 5 ~~~~~~~~l~~--k~vlItGa------------------s~gIG~~ia~~l~~~G~~v~~~~~~~~~-~--------~~~ 55 (258)
T PRK06935 5 KFSMDFFSLDG--KVAIVTGG------------------NTGLGQGYAVALAKAGADIIITTHGTNW-D--------ETR 55 (258)
T ss_pred hhccccccCCC--CEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCCcHH-H--------HHH
Confidence 45533235655 99999999 9999999999999999999998764211 0 000
Q ss_pred hhhhcccccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 111 ECFEVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 111 ~~~~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
+.+. .....+.+... .+.+..+..+.+.++.+.++..|++||+|++....
T Consensus 56 ~~~~-~~~~~~~~~~~------D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~ 105 (258)
T PRK06935 56 RLIE-KEGRKVTFVQV------DLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRA 105 (258)
T ss_pred HHHH-hcCCceEEEEc------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 0000 00111221111 11122445555555666778899999999986543
No 17
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.87 E-value=5.7e-05 Score=68.28 Aligned_cols=84 Identities=18% Similarity=0.123 Sum_probs=57.2
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
++++ |++|||+| +|.+|.++|+.|+++|+.|+++......... ..+..
T Consensus 6 ~l~~--k~vlItG~------------------s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~-------~~~~~----- 53 (266)
T PRK06171 6 NLQG--KIIIVTGG------------------SSGIGLAIVKELLANGANVVNADIHGGDGQH-------ENYQF----- 53 (266)
T ss_pred cCCC--CEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEeCCcccccc-------CceEE-----
Confidence 3544 99999999 9999999999999999999998764321100 00000
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
..+++. +...+.+.+..+.+.++..|++||+|++..
T Consensus 54 -~~~D~~-----------~~~~~~~~~~~~~~~~g~id~li~~Ag~~~ 89 (266)
T PRK06171 54 -VPTDVS-----------SAEEVNHTVAEIIEKFGRIDGLVNNAGINI 89 (266)
T ss_pred -EEccCC-----------CHHHHHHHHHHHHHHcCCCCEEEECCcccC
Confidence 012222 334555555555667789999999999854
No 18
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.86 E-value=7.9e-05 Score=67.28 Aligned_cols=91 Identities=15% Similarity=0.111 Sum_probs=58.4
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccc
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEE 118 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~ 118 (292)
++| |++|||+| ||..|.++|+.|+++|+.|+++.+... +. ....+. ...
T Consensus 6 l~~--k~~lItGa------------------s~gIG~aia~~l~~~G~~vv~~~~~~~--~~--------~~~~~~-~~~ 54 (251)
T PRK12481 6 LNG--KVAIITGC------------------NTGLGQGMAIGLAKAGADIVGVGVAEA--PE--------TQAQVE-ALG 54 (251)
T ss_pred cCC--CEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEecCchH--HH--------HHHHHH-HcC
Confidence 544 99999999 999999999999999999998765321 10 000000 000
Q ss_pred cceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 119 SAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 119 ~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
..+.+.. ..+.+..++.+.+.+..+.++..|++||+|++...
T Consensus 55 ~~~~~~~------~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~ 96 (251)
T PRK12481 55 RKFHFIT------ADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRR 96 (251)
T ss_pred CeEEEEE------eCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence 1121111 11223455666666667778899999999998653
No 19
>PRK06194 hypothetical protein; Provisional
Probab=97.86 E-value=6.9e-05 Score=68.51 Aligned_cols=92 Identities=12% Similarity=0.140 Sum_probs=59.2
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| +|..|.++|+.|+++|+.|+++.+..... . ...+-+. .....+.
T Consensus 6 ~k~vlVtGa------------------sggIG~~la~~l~~~G~~V~~~~r~~~~~------~--~~~~~~~-~~~~~~~ 58 (287)
T PRK06194 6 GKVAVITGA------------------ASGFGLAFARIGAALGMKLVLADVQQDAL------D--RAVAELR-AQGAEVL 58 (287)
T ss_pred CCEEEEeCC------------------ccHHHHHHHHHHHHCCCEEEEEeCChHHH------H--HHHHHHH-hcCCeEE
Confidence 399999999 99999999999999999999987642210 0 0000000 0001122
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
+.. ..+.++.++.+.+....+.++..|++||+|++....
T Consensus 59 ~~~------~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~ 97 (287)
T PRK06194 59 GVR------TDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGG 97 (287)
T ss_pred EEE------CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 121 122344566666666666778899999999997653
No 20
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.86 E-value=5.3e-05 Score=68.16 Aligned_cols=83 Identities=23% Similarity=0.230 Sum_probs=55.8
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
+++| |+||||+| ||..|.++|+.|+++|++|+++.+..... ++. .+.+
T Consensus 6 ~~~~--k~vlItGa------------------s~gIG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~--~~~~----- 53 (260)
T PRK06523 6 ELAG--KRALVTGG------------------TKGIGAATVARLLEAGARVVTTARSRPDD-----LPE--GVEF----- 53 (260)
T ss_pred CCCC--CEEEEECC------------------CCchhHHHHHHHHHCCCEEEEEeCChhhh-----cCC--ceeE-----
Confidence 4655 99999999 99999999999999999999998753210 110 0000
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
..+++. +..++.+.+.++.+.++..|++||+|++.
T Consensus 54 -~~~D~~-----------~~~~~~~~~~~~~~~~~~id~vi~~ag~~ 88 (260)
T PRK06523 54 -VAADLT-----------TAEGCAAVARAVLERLGGVDILVHVLGGS 88 (260)
T ss_pred -EecCCC-----------CHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence 012222 22344444444556678899999999864
No 21
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.85 E-value=3e-05 Score=69.78 Aligned_cols=93 Identities=14% Similarity=0.154 Sum_probs=58.4
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
++++ |++|||+| ||..|.++|+.|+++|+.|+++.+...... ..+-+. ..
T Consensus 5 ~~~~--k~vlVtGa------------------s~gIG~~la~~l~~~G~~v~~~~r~~~~~~---------~~~~~~-~~ 54 (260)
T PRK12823 5 RFAG--KVVVVTGA------------------AQGIGRGVALRAAAEGARVVLVDRSELVHE---------VAAELR-AA 54 (260)
T ss_pred ccCC--CEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCchHHHH---------HHHHHH-hc
Confidence 4555 99999999 999999999999999999998876421100 000000 00
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
...+.... ..+.++.++.+.+.++.+.++..|++||+|++..+
T Consensus 55 ~~~~~~~~------~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~ 97 (260)
T PRK12823 55 GGEALALT------ADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIW 97 (260)
T ss_pred CCeEEEEE------EeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccC
Confidence 01111110 11223455666666666677889999999997643
No 22
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.84 E-value=9.5e-05 Score=66.89 Aligned_cols=87 Identities=20% Similarity=0.222 Sum_probs=56.4
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+| ||.+|.++|+.|++.|+.|+++.+..... +-+.......+.
T Consensus 5 ~k~vlItGa------------------s~gIG~~ia~~l~~~G~~V~~~~r~~~~~------------~~l~~~~~~~~~ 54 (262)
T TIGR03325 5 GEVVLVTGG------------------ASGLGRAIVDRFVAEGARVAVLDKSAAGL------------QELEAAHGDAVV 54 (262)
T ss_pred CcEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCCHHHH------------HHHHhhcCCceE
Confidence 399999999 99999999999999999999887642110 000000001121
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
... ..+.++....+.+.++.+.++..|++|++|++..
T Consensus 55 ~~~------~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~ 91 (262)
T TIGR03325 55 GVE------GDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWD 91 (262)
T ss_pred EEE------eccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCc
Confidence 111 1122345555666666677889999999999854
No 23
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.84 E-value=6.1e-05 Score=68.18 Aligned_cols=94 Identities=14% Similarity=0.190 Sum_probs=58.4
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
+++| |+||||+| ||..|.++|+.|+++|+.|++++++..... . ....-+....
T Consensus 5 ~l~~--k~vlItGa------------------s~gIG~~ia~~l~~~G~~v~~~~~~~~~~~-----~--~~~~~~~~~~ 57 (260)
T PRK08416 5 EMKG--KTLVISGG------------------TRGIGKAIVYEFAQSGVNIAFTYNSNVEEA-----N--KIAEDLEQKY 57 (260)
T ss_pred ccCC--CEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEcCCCHHHH-----H--HHHHHHHHhc
Confidence 4655 99999999 999999999999999999998875432100 0 0000000000
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
...+.... ..+.++.++.+.+.++.+.++..|++|++|+++
T Consensus 58 ~~~~~~~~------~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~ 98 (260)
T PRK08416 58 GIKAKAYP------LNILEPETYKELFKKIDEDFDRVDFFISNAIIS 98 (260)
T ss_pred CCceEEEE------cCCCCHHHHHHHHHHHHHhcCCccEEEECcccc
Confidence 01111111 112244566666666666788899999999875
No 24
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.83 E-value=5.4e-05 Score=67.50 Aligned_cols=89 Identities=13% Similarity=0.086 Sum_probs=56.0
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| ||..|.++|+.|+++|+.|+++.+.. ... ..+.+. .....+.
T Consensus 5 ~k~vlItGa------------------s~gIG~~ia~~l~~~G~~vi~~~r~~-~~~---------~~~~~~-~~~~~~~ 55 (248)
T TIGR01832 5 GKVALVTGA------------------NTGLGQGIAVGLAEAGADIVGAGRSE-PSE---------TQQQVE-ALGRRFL 55 (248)
T ss_pred CCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEcCch-HHH---------HHHHHH-hcCCceE
Confidence 399999999 99999999999999999999987632 100 000000 0001122
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
+... .+.+..++.+.+.+..+.++..|++||+|++...
T Consensus 56 ~~~~------D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~ 93 (248)
T TIGR01832 56 SLTA------DLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRR 93 (248)
T ss_pred EEEC------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 2111 1123345555555555667889999999998653
No 25
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.79 E-value=5.5e-05 Score=67.97 Aligned_cols=93 Identities=18% Similarity=0.160 Sum_probs=58.7
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
+++| |++|||+| ||..|.++|+.|+++|+.|+++.++.+... ..+-+.. .
T Consensus 4 ~l~~--~~ilItGa------------------sggiG~~la~~l~~~G~~v~~~~r~~~~~~---------~~~~~~~-~ 53 (258)
T PRK08628 4 NLKD--KVVIVTGG------------------ASGIGAAISLRLAEEGAIPVIFGRSAPDDE---------FAEELRA-L 53 (258)
T ss_pred CcCC--CEEEEeCC------------------CChHHHHHHHHHHHcCCcEEEEcCChhhHH---------HHHHHHh-c
Confidence 4655 99999999 999999999999999999999876532110 0010000 0
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
...+..... .+.+..++.+.+.++.+.++..|++||+|++.+.
T Consensus 54 ~~~~~~~~~------D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 96 (258)
T PRK08628 54 QPRAEFVQV------DLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDG 96 (258)
T ss_pred CCceEEEEc------cCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCC
Confidence 111222111 1123345555555556667889999999998653
No 26
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.79 E-value=5.4e-05 Score=68.51 Aligned_cols=89 Identities=13% Similarity=0.095 Sum_probs=56.8
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCc--cHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcc
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSS--GHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVT 116 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SS--G~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~ 116 (292)
++| |++|||+| | +.+|.++|+.|+++|+.|++.++......-...+.
T Consensus 5 l~~--k~~lItGa------------------s~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~----------- 53 (252)
T PRK06079 5 LSG--KKIVVMGV------------------ANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLV----------- 53 (252)
T ss_pred cCC--CEEEEeCC------------------CCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhc-----------
Confidence 544 99999999 5 78999999999999999998876411100000000
Q ss_pred cccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 117 EESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 117 ~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
...+.... ..+.+..++.+.+..+.+.++..|++|++|++..
T Consensus 54 -~~~~~~~~------~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~ 95 (252)
T PRK06079 54 -DEEDLLVE------CDVASDESIERAFATIKERVGKIDGIVHAIAYAK 95 (252)
T ss_pred -cCceeEEe------CCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccc
Confidence 01111111 1122345556666566677889999999999865
No 27
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.0001 Score=66.27 Aligned_cols=94 Identities=14% Similarity=0.104 Sum_probs=59.3
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccc
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEE 118 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~ 118 (292)
++| |++|||+| ||.+|.++|+.|+++|++|+++.+..... . ...+.+.. ..
T Consensus 7 ~~~--k~vlVtGa------------------s~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~--~~~~~l~~-~~ 57 (253)
T PRK05867 7 LHG--KRALITGA------------------STGIGKRVALAYVEAGAQVAIAARHLDAL------E--KLADEIGT-SG 57 (253)
T ss_pred CCC--CEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEcCCHHHH------H--HHHHHHHh-cC
Confidence 544 99999999 99999999999999999999887642100 0 00000000 00
Q ss_pred cceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 119 SAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 119 ~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
..+.... ..+.+..++.+.+.+..+.++..|++||+|++..+.
T Consensus 58 ~~~~~~~------~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~ 100 (253)
T PRK05867 58 GKVVPVC------CDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVT 100 (253)
T ss_pred CeEEEEE------ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 1121111 112244556666666667788999999999986543
No 28
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.77 E-value=7.6e-05 Score=67.70 Aligned_cols=89 Identities=18% Similarity=0.170 Sum_probs=57.8
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccc
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEE 118 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~ 118 (292)
+++ |++|||+| ||..|.++|+.|+++|+.|+++.+...... ...+.+ .
T Consensus 4 ~~~--k~vlItGa------------------s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~----~ 51 (261)
T PRK08265 4 LAG--KVAIVTGG------------------ATLIGAAVARALVAAGARVAIVDIDADNGA--------AVAASL----G 51 (261)
T ss_pred CCC--CEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHh----C
Confidence 444 99999999 999999999999999999999876421100 000000 0
Q ss_pred cceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 119 SAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 119 ~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
.++.+.. ..+.+..++.+.+.++.+.++..|++||+|++..
T Consensus 52 ~~~~~~~------~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~ 92 (261)
T PRK08265 52 ERARFIA------TDITDDAAIERAVATVVARFGRVDILVNLACTYL 92 (261)
T ss_pred CeeEEEE------ecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 1122111 1122335566666666677889999999999754
No 29
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.77 E-value=0.00011 Score=66.07 Aligned_cols=96 Identities=18% Similarity=0.200 Sum_probs=59.8
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcc-
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVT- 116 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~- 116 (292)
.+++ |+||||+| +|.+|.++|+.|+++|+.|+++.+..... . ...+-+...
T Consensus 4 ~l~~--k~vlVtGa------------------s~gIG~~~a~~l~~~G~~vv~~~r~~~~~------~--~~~~~~~~~~ 55 (260)
T PRK07063 4 RLAG--KVALVTGA------------------AQGIGAAIARAFAREGAAVALADLDAALA------E--RAAAAIARDV 55 (260)
T ss_pred ccCC--CEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCCHHHH------H--HHHHHHHhcc
Confidence 3544 99999999 99999999999999999999987642110 0 000000000
Q ss_pred cccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 117 EESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 117 ~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
....+.+... .+.+..++.+.+.++.+.++..|++||+|++..+.
T Consensus 56 ~~~~~~~~~~------Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~ 100 (260)
T PRK07063 56 AGARVLAVPA------DVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFA 100 (260)
T ss_pred CCceEEEEEc------cCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCC
Confidence 0111222111 12233455555555667788999999999987654
No 30
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.76 E-value=9.8e-05 Score=66.33 Aligned_cols=95 Identities=21% Similarity=0.134 Sum_probs=59.6
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
+++| |+||||+| +|..|.++|+.|+++|+.|+++.+..... . ...+.+.. .
T Consensus 7 ~~~~--k~vlItGa------------------~g~iG~~ia~~l~~~G~~V~~~~r~~~~~------~--~~~~~i~~-~ 57 (255)
T PRK07523 7 DLTG--RRALVTGS------------------SQGIGYALAEGLAQAGAEVILNGRDPAKL------A--AAAESLKG-Q 57 (255)
T ss_pred CCCC--CEEEEECC------------------cchHHHHHHHHHHHcCCEEEEEeCCHHHH------H--HHHHHHHh-c
Confidence 3555 99999999 99999999999999999999887642100 0 01111100 0
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
...+.... ..+.+..++.+.+....+.++..|++||+|++....
T Consensus 58 ~~~~~~~~------~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~ 101 (255)
T PRK07523 58 GLSAHALA------FDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRT 101 (255)
T ss_pred CceEEEEE------ccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 01121111 122244556666656666788899999999986543
No 31
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.76 E-value=5.6e-05 Score=68.09 Aligned_cols=91 Identities=12% Similarity=0.078 Sum_probs=57.8
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+| ||..|.++|+.|+++|+.|+++.+.....+. .+.+. .....+.
T Consensus 6 ~~~~lItG~------------------s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~---------~~~~~-~~~~~~~ 57 (263)
T PRK08226 6 GKTALITGA------------------LQGIGEGIARVFARHGANLILLDISPEIEKL---------ADELC-GRGHRCT 57 (263)
T ss_pred CCEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEecCCHHHHHH---------HHHHH-HhCCceE
Confidence 399999999 9999999999999999999999865321110 00000 0011121
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
.... .+.+..++.+.+....+.++..|++||+|++..+.
T Consensus 58 ~~~~------Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~ 96 (263)
T PRK08226 58 AVVA------DVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLG 96 (263)
T ss_pred EEEC------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 1111 12233455555555566678899999999987544
No 32
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.76 E-value=8.1e-05 Score=70.11 Aligned_cols=92 Identities=11% Similarity=0.107 Sum_probs=63.1
Q ss_pred CCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcc
Q 022803 37 SSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVT 116 (292)
Q Consensus 37 ~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~ 116 (292)
++.+| ++||||+| ++.+|.+||.+|++||+.+.++.-.....+ ..++...-.
T Consensus 34 k~v~g--~~vLITGg------------------g~GlGr~ialefa~rg~~~vl~Din~~~~~--------etv~~~~~~ 85 (300)
T KOG1201|consen 34 KSVSG--EIVLITGG------------------GSGLGRLIALEFAKRGAKLVLWDINKQGNE--------ETVKEIRKI 85 (300)
T ss_pred hhccC--CEEEEeCC------------------CchHHHHHHHHHHHhCCeEEEEeccccchH--------HHHHHHHhc
Confidence 34545 99999999 888999999999999998888876432111 112211100
Q ss_pred ---cccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 117 ---EESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 117 ---~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
..+.+++ .+++++.+...++.+..++.|++|.+|+|.=.+
T Consensus 86 g~~~~y~cdi-----------s~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~ 128 (300)
T KOG1201|consen 86 GEAKAYTCDI-----------SDREEIYRLAKKVKKEVGDVDILVNNAGIVTGK 128 (300)
T ss_pred CceeEEEecC-----------CCHHHHHHHHHHHHHhcCCceEEEeccccccCC
Confidence 0122333 355777777666778899999999999996555
No 33
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.75 E-value=0.00016 Score=65.37 Aligned_cols=87 Identities=20% Similarity=0.219 Sum_probs=56.5
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCC-ccCCCCCccchhhhhcccccce
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEP-YCSSLPDDAFLECFEVTEESAV 121 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P-~~~~l~~~~~~~~~~~~~~~~i 121 (292)
+|++|||+| ||.+|.++|+.|+++|+.|+++.+...... ....++ ..+
T Consensus 6 ~k~vlVtGa------------------s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------~~~ 54 (263)
T PRK06200 6 GQVALITGG------------------GSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFG-------------DHV 54 (263)
T ss_pred CCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-------------Ccc
Confidence 399999999 999999999999999999998876421100 000000 111
Q ss_pred EEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 122 QGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 122 ~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
.+... .+.+...+.+.+.++.+.++..|++||+|++..+
T Consensus 55 ~~~~~------D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~ 93 (263)
T PRK06200 55 LVVEG------DVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDY 93 (263)
T ss_pred eEEEc------cCCCHHHHHHHHHHHHHhcCCCCEEEECCCCccc
Confidence 11111 1123345555555566778899999999998754
No 34
>PLN02253 xanthoxin dehydrogenase
Probab=97.75 E-value=5.3e-05 Score=69.10 Aligned_cols=92 Identities=15% Similarity=0.124 Sum_probs=58.0
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
.+.| |++|||+| +|..|.++|++|+++|+.|+++.+...... ...+.+ ..
T Consensus 15 ~l~~--k~~lItGa------------------s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------~~~~~~--~~ 64 (280)
T PLN02253 15 RLLG--KVALVTGG------------------ATGIGESIVRLFHKHGAKVCIVDLQDDLGQ--------NVCDSL--GG 64 (280)
T ss_pred ccCC--CEEEEECC------------------CchHHHHHHHHHHHcCCEEEEEeCCHHHHH--------HHHHHh--cC
Confidence 3544 99999999 999999999999999999999875321100 000000 00
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
...+.... ..+.+..++.+++..+.+.++..|++||+|++..
T Consensus 65 ~~~~~~~~------~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~ 106 (280)
T PLN02253 65 EPNVCFFH------CDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTG 106 (280)
T ss_pred CCceEEEE------eecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCC
Confidence 01111111 1122335566666666677889999999999753
No 35
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.72 E-value=0.0002 Score=64.58 Aligned_cols=93 Identities=15% Similarity=0.098 Sum_probs=59.1
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
+++| |.+|||+| +|..|.++|+.|++.|+.|+++..... + ...+-+.. .
T Consensus 7 ~l~~--k~~lItG~------------------~~gIG~a~a~~l~~~G~~vv~~~~~~~--~--------~~~~~~~~-~ 55 (253)
T PRK08993 7 SLEG--KVAVVTGC------------------DTGLGQGMALGLAEAGCDIVGINIVEP--T--------ETIEQVTA-L 55 (253)
T ss_pred CCCC--CEEEEECC------------------CchHHHHHHHHHHHCCCEEEEecCcch--H--------HHHHHHHh-c
Confidence 3555 99999999 999999999999999999987754211 0 00000000 0
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
...+.... ..+.+..++.+.+.++.+.++..|++||+|++..+.
T Consensus 56 ~~~~~~~~------~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~ 99 (253)
T PRK08993 56 GRRFLSLT------ADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRRE 99 (253)
T ss_pred CCeEEEEE------CCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 01111111 122244566666666677788999999999986544
No 36
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00016 Score=64.03 Aligned_cols=93 Identities=18% Similarity=0.213 Sum_probs=58.1
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| +|..|.++|+.|+++|++|+++.+... +.. . ...+.+. .....+.
T Consensus 5 ~~~vlItG~------------------~~~iG~~la~~l~~~g~~v~~~~~~~~--~~~---~--~~~~~~~-~~~~~~~ 58 (245)
T PRK12937 5 NKVAIVTGA------------------SRGIGAAIARRLAADGFAVAVNYAGSA--AAA---D--ELVAEIE-AAGGRAI 58 (245)
T ss_pred CCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEecCCCH--HHH---H--HHHHHHH-hcCCeEE
Confidence 399999999 999999999999999999998876432 100 0 0000000 0011122
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
.... .+.+..++.+.+.++.+.++..|++||+|++....
T Consensus 59 ~~~~------Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 97 (245)
T PRK12937 59 AVQA------DVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLG 97 (245)
T ss_pred EEEC------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 2111 11233555666666666778899999999986543
No 37
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00017 Score=65.22 Aligned_cols=96 Identities=20% Similarity=0.179 Sum_probs=59.6
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
+++| |++|||+| ||..|.++|+.|+++|+.|+++.+..... . ...+.+....
T Consensus 5 ~l~~--k~~lItGa------------------s~giG~~ia~~l~~~G~~V~~~~r~~~~~------~--~~~~~~~~~~ 56 (265)
T PRK07062 5 QLEG--RVAVVTGG------------------SSGIGLATVELLLEAGASVAICGRDEERL------A--SAEARLREKF 56 (265)
T ss_pred ccCC--CEEEEeCC------------------CchHHHHHHHHHHHCCCeEEEEeCCHHHH------H--HHHHHHHhhC
Confidence 4544 99999999 99999999999999999999888742110 0 0000000000
Q ss_pred -ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 118 -ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 118 -~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
...+.... ..+.+..++.+.+.++.+.++..|++|++|++....
T Consensus 57 ~~~~~~~~~------~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~ 101 (265)
T PRK07062 57 PGARLLAAR------CDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVS 101 (265)
T ss_pred CCceEEEEE------ecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 01121111 112244556566655666788899999999986543
No 38
>PRK08589 short chain dehydrogenase; Validated
Probab=97.71 E-value=6.9e-05 Score=68.50 Aligned_cols=91 Identities=14% Similarity=0.169 Sum_probs=57.4
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccc
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEE 118 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~ 118 (292)
++| |++|||+| ||..|.++|+.|+++|+.|+++.+. .... ....-+. ...
T Consensus 4 l~~--k~vlItGa------------------s~gIG~aia~~l~~~G~~vi~~~r~-~~~~--------~~~~~~~-~~~ 53 (272)
T PRK08589 4 LEN--KVAVITGA------------------STGIGQASAIALAQEGAYVLAVDIA-EAVS--------ETVDKIK-SNG 53 (272)
T ss_pred CCC--CEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCc-HHHH--------HHHHHHH-hcC
Confidence 444 99999999 9999999999999999999999865 2100 0000000 000
Q ss_pred cceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 119 SAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 119 ~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
..+..... .+.+..++.+.+.++.+.++..|++|++|++..
T Consensus 54 ~~~~~~~~------Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~ 94 (272)
T PRK08589 54 GKAKAYHV------DISDEQQVKDFASEIKEQFGRVDVLFNNAGVDN 94 (272)
T ss_pred CeEEEEEe------ecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCC
Confidence 11111111 112334555555556677888999999999864
No 39
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.0002 Score=64.47 Aligned_cols=96 Identities=18% Similarity=0.128 Sum_probs=59.7
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
++++ |++|||+| ||..|.++|+.|++.|++|+++++.... .. . ...+.+.- .
T Consensus 5 ~~~~--k~~lVtG~------------------s~gIG~~ia~~l~~~G~~v~~~~r~~~~--~~---~--~~~~~l~~-~ 56 (254)
T PRK06114 5 DLDG--QVAFVTGA------------------GSGIGQRIAIGLAQAGADVALFDLRTDD--GL---A--ETAEHIEA-A 56 (254)
T ss_pred CCCC--CEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCCcch--HH---H--HHHHHHHh-c
Confidence 4555 99999999 9999999999999999999998864321 00 0 00010000 0
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
...+..... .+.+...+.+.+.++.+.++..|++|++|++..+.
T Consensus 57 ~~~~~~~~~------D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~ 100 (254)
T PRK06114 57 GRRAIQIAA------DVTSKADLRAAVARTEAELGALTLAVNAAGIANAN 100 (254)
T ss_pred CCceEEEEc------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 011211111 11233455555555566778899999999987654
No 40
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.70 E-value=0.00015 Score=64.62 Aligned_cols=92 Identities=17% Similarity=0.168 Sum_probs=57.6
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+| ||..|.++|+.|+++|+.|+++.+...... ....+-+. .....+.
T Consensus 3 ~k~~lVtG~------------------s~giG~~~a~~l~~~G~~vv~~~~~~~~~~-------~~~~~~~~-~~~~~~~ 56 (246)
T PRK12938 3 QRIAYVTGG------------------MGGIGTSICQRLHKDGFKVVAGCGPNSPRR-------VKWLEDQK-ALGFDFI 56 (246)
T ss_pred CCEEEEECC------------------CChHHHHHHHHHHHcCCEEEEEcCCChHHH-------HHHHHHHH-hcCCcEE
Confidence 399999999 999999999999999999988765422100 00111000 0001111
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
+.. ..+.+..++.+.+.++.+.++..|++||+|+++..
T Consensus 57 ~~~------~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~ 94 (246)
T PRK12938 57 ASE------GNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRD 94 (246)
T ss_pred EEE------cCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 111 12224456666666666677899999999998653
No 41
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.70 E-value=0.00017 Score=65.35 Aligned_cols=95 Identities=16% Similarity=0.136 Sum_probs=61.0
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
++.+ |++|||+| +|..|.++|+.|+++|+.|+++.+..... . .....+. ..
T Consensus 7 ~~~~--k~~lItGa------------------~~~iG~~ia~~l~~~G~~vv~~~~~~~~~------~--~~~~~~~-~~ 57 (265)
T PRK07097 7 SLKG--KIALITGA------------------SYGIGFAIAKAYAKAGATIVFNDINQELV------D--KGLAAYR-EL 57 (265)
T ss_pred CCCC--CEEEEeCC------------------CchHHHHHHHHHHHCCCeEEEEeCCHHHH------H--HHHHHHH-hc
Confidence 4544 99999999 89999999999999999998886542110 0 0011010 00
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
...+..... .+.+..++.+.+.++.+.++..|++||+|++++..
T Consensus 58 ~~~~~~~~~------Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~ 101 (265)
T PRK07097 58 GIEAHGYVC------DVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRI 101 (265)
T ss_pred CCceEEEEc------CCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCC
Confidence 111221111 12244666666666667778899999999998865
No 42
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.00017 Score=67.81 Aligned_cols=95 Identities=18% Similarity=0.120 Sum_probs=58.5
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcc-
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVT- 116 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~- 116 (292)
+++| |++|||+| ||.+|.++|+.|+++|+.|+++.+.... . . ...+-+...
T Consensus 11 ~l~g--k~~lITGa------------------s~GIG~~~a~~La~~G~~Vil~~R~~~~--~----~--~~~~~l~~~~ 62 (313)
T PRK05854 11 DLSG--KRAVVTGA------------------SDGLGLGLARRLAAAGAEVILPVRNRAK--G----E--AAVAAIRTAV 62 (313)
T ss_pred ccCC--CEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEeCCHHH--H----H--HHHHHHHHhC
Confidence 4555 99999999 8999999999999999999998764210 0 0 000000000
Q ss_pred cccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 117 EESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 117 ~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
....+.+... .+.+..+..+.+.+..+..+..|++|++|++...
T Consensus 63 ~~~~v~~~~~------Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~ 106 (313)
T PRK05854 63 PDAKLSLRAL------DLSSLASVAALGEQLRAEGRPIHLLINNAGVMTP 106 (313)
T ss_pred CCCceEEEEe------cCCCHHHHHHHHHHHHHhCCCccEEEECCccccC
Confidence 0011222111 1123345555555556667889999999998753
No 43
>PRK06196 oxidoreductase; Provisional
Probab=97.68 E-value=0.00016 Score=67.66 Aligned_cols=89 Identities=22% Similarity=0.150 Sum_probs=57.0
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
+++| |+||||+| ||.+|.++|+.|+++|+.|+++.+...... ....-+
T Consensus 23 ~l~~--k~vlITGa------------------sggIG~~~a~~L~~~G~~Vv~~~R~~~~~~--------~~~~~l---- 70 (315)
T PRK06196 23 DLSG--KTAIVTGG------------------YSGLGLETTRALAQAGAHVIVPARRPDVAR--------EALAGI---- 70 (315)
T ss_pred CCCC--CEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHh----
Confidence 5655 99999999 999999999999999999999876421100 000000
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
..+.... ..+.+..++.+.+.+..+.++..|++||+|++..
T Consensus 71 -~~v~~~~------~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~ 111 (315)
T PRK06196 71 -DGVEVVM------LDLADLESVRAFAERFLDSGRRIDILINNAGVMA 111 (315)
T ss_pred -hhCeEEE------ccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCC
Confidence 0011110 1122335555555555566788999999999753
No 44
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00018 Score=65.22 Aligned_cols=91 Identities=14% Similarity=0.064 Sum_probs=58.4
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
++++|||+| +|.+|.++|+.|+++|++|+++.+.....+ ...+.+. ....++.
T Consensus 10 ~~~vlItGa------------------sggIG~~~a~~l~~~G~~Vi~~~r~~~~~~--------~~~~~l~-~~~~~~~ 62 (263)
T PRK07814 10 DQVAVVTGA------------------GRGLGAAIALAFAEAGADVLIAARTESQLD--------EVAEQIR-AAGRRAH 62 (263)
T ss_pred CCEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHHH-hcCCcEE
Confidence 399999999 999999999999999999999887421100 0000000 0011222
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
+... .+.+..++.+.+.++.+.++..|++||+|++.-.
T Consensus 63 ~~~~------D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~ 100 (263)
T PRK07814 63 VVAA------DLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMP 100 (263)
T ss_pred EEEc------cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 2111 1223456666666667777899999999987543
No 45
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00016 Score=66.58 Aligned_cols=94 Identities=17% Similarity=0.151 Sum_probs=59.7
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccc
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEE 118 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~ 118 (292)
++| |++|||+| ||..|.++|+.|+++|+.|+++.+..... . ...+-+. ...
T Consensus 4 ~~~--k~vlVTGa------------------s~gIG~ala~~La~~G~~Vv~~~r~~~~l------~--~~~~~l~-~~~ 54 (275)
T PRK05876 4 FPG--RGAVITGG------------------ASGIGLATGTEFARRGARVVLGDVDKPGL------R--QAVNHLR-AEG 54 (275)
T ss_pred cCC--CEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCCHHHH------H--HHHHHHH-hcC
Confidence 544 99999999 99999999999999999999887542110 0 0011010 000
Q ss_pred cceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 119 SAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 119 ~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
..+.... ..+.+..++.+.+.++.+.++..|++||+|++..+.
T Consensus 55 ~~~~~~~------~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~ 97 (275)
T PRK05876 55 FDVHGVM------CDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGG 97 (275)
T ss_pred CeEEEEe------CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 1111111 122244566666666667788999999999987544
No 46
>PRK06128 oxidoreductase; Provisional
Probab=97.67 E-value=0.00018 Score=66.83 Aligned_cols=95 Identities=15% Similarity=0.158 Sum_probs=58.1
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
.++| |+||||+| ||..|.++|+.|+++|++|++.+........ . ...+.+. ..
T Consensus 52 ~l~~--k~vlITGa------------------s~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~----~--~~~~~~~-~~ 104 (300)
T PRK06128 52 RLQG--RKALITGA------------------DSGIGRATAIAFAREGADIALNYLPEEEQDA----A--EVVQLIQ-AE 104 (300)
T ss_pred ccCC--CEEEEecC------------------CCcHHHHHHHHHHHcCCEEEEEeCCcchHHH----H--HHHHHHH-Hc
Confidence 3544 99999999 9999999999999999999887653221000 0 0011110 00
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
...+.+.. ..+.+..++.+.+.++.+.++..|++||+|++..
T Consensus 105 ~~~~~~~~------~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~ 146 (300)
T PRK06128 105 GRKAVALP------GDLKDEAFCRQLVERAVKELGGLDILVNIAGKQT 146 (300)
T ss_pred CCeEEEEe------cCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccC
Confidence 01111111 1112335556666666677889999999999764
No 47
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.67 E-value=0.0002 Score=64.11 Aligned_cols=92 Identities=15% Similarity=0.100 Sum_probs=57.7
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+| ||.+|.++|+.|++.|++|+++.+.... . . ...+-+. .....+.
T Consensus 7 ~~~vlItGa------------------sg~iG~~la~~l~~~G~~v~~~~r~~~~--~----~--~~~~~~~-~~~~~~~ 59 (262)
T PRK13394 7 GKTAVVTGA------------------ASGIGKEIALELARAGAAVAIADLNQDG--A----N--AVADEIN-KAGGKAI 59 (262)
T ss_pred CCEEEEECC------------------CChHHHHHHHHHHHCCCeEEEEeCChHH--H----H--HHHHHHH-hcCceEE
Confidence 399999999 9999999999999999999988764210 0 0 0000000 0011121
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
... ..+.+...+.+.+.+....++..|++||+|++..+.
T Consensus 60 ~~~------~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~ 98 (262)
T PRK13394 60 GVA------MDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVN 98 (262)
T ss_pred EEE------CCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCC
Confidence 111 122244556666555556678899999999987543
No 48
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.66 E-value=0.0002 Score=65.84 Aligned_cols=92 Identities=10% Similarity=0.068 Sum_probs=55.9
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+|+ |++..|.++|+.|++.|+.|+++++...... .++-+.... ....
T Consensus 10 ~k~~lItGas----------------~~~GIG~aia~~la~~G~~V~l~~r~~~~~~---------~~~~l~~~~-~~~~ 63 (272)
T PRK08159 10 GKRGLILGVA----------------NNRSIAWGIAKACRAAGAELAFTYQGDALKK---------RVEPLAAEL-GAFV 63 (272)
T ss_pred CCEEEEECCC----------------CCCcHHHHHHHHHHHCCCEEEEEcCchHHHH---------HHHHHHHhc-CCce
Confidence 4999999991 1378999999999999999988764311000 000000000 0000
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
.. ...+.+..++.+.+.++.+.++..|++|++|++.++
T Consensus 64 ~~------~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~ 101 (272)
T PRK08159 64 AG------HCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDK 101 (272)
T ss_pred EE------ecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCc
Confidence 00 011223455666666666778899999999999864
No 49
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00027 Score=64.61 Aligned_cols=89 Identities=12% Similarity=0.105 Sum_probs=56.9
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| ||.+|.++|+.|+++|+.|+++.+..... ..+. . .....+.
T Consensus 4 ~~~vlVtGa------------------sggiG~~la~~l~~~G~~V~~~~r~~~~~---~~l~-----~----~~~~~~~ 53 (277)
T PRK06180 4 MKTWLITGV------------------SSGFGRALAQAALAAGHRVVGTVRSEAAR---ADFE-----A----LHPDRAL 53 (277)
T ss_pred CCEEEEecC------------------CChHHHHHHHHHHhCcCEEEEEeCCHHHH---HHHH-----h----hcCCCee
Confidence 389999999 99999999999999999999988742210 0000 0 0001111
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
... ..+.+...+.+.+..+.+.++..|++||+|++..+.
T Consensus 54 ~~~------~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~ 92 (277)
T PRK06180 54 ARL------LDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEG 92 (277)
T ss_pred EEE------ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCc
Confidence 110 011133455555555566678899999999997654
No 50
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.0002 Score=63.82 Aligned_cols=89 Identities=17% Similarity=0.156 Sum_probs=55.1
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|++|||+| ||.+|.++|++|+++|+.|+++.+.....+ ...+.+. .....+..
T Consensus 7 k~vlItGa------------------sg~iG~~la~~l~~~g~~vi~~~r~~~~~~--------~~~~~~~-~~~~~~~~ 59 (250)
T PRK07774 7 KVAIVTGA------------------AGGIGQAYAEALAREGASVVVADINAEGAE--------RVAKQIV-ADGGTAIA 59 (250)
T ss_pred CEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHHH-hcCCcEEE
Confidence 89999999 999999999999999999999987422100 0000000 00001111
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
.. -.+.+..++.+.+....+.++..|++||+|++..
T Consensus 60 ~~------~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~ 95 (250)
T PRK07774 60 VQ------VDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYG 95 (250)
T ss_pred EE------cCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcC
Confidence 10 0111334455555555666788999999999864
No 51
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.00029 Score=64.08 Aligned_cols=88 Identities=17% Similarity=0.101 Sum_probs=57.5
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|+||||+| ||..|.++|++|+++|+.|+++.+...... .+. . .....+.+
T Consensus 3 k~vlVtGa------------------sg~IG~~la~~L~~~g~~v~~~~r~~~~~~---~~~-----~----~~~~~~~~ 52 (276)
T PRK06482 3 KTWFITGA------------------SSGFGRGMTERLLARGDRVAATVRRPDALD---DLK-----A----RYGDRLWV 52 (276)
T ss_pred CEEEEecC------------------CCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHH-----H----hccCceEE
Confidence 78999999 999999999999999999999887421100 000 0 00011222
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
.. ..+.+...+.+.+.+..+.++..|++||+|+.+.+.
T Consensus 53 ~~------~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 90 (276)
T PRK06482 53 LQ------LDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFG 90 (276)
T ss_pred EE------ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCc
Confidence 11 122234555555555566678899999999988755
No 52
>PRK12743 oxidoreductase; Provisional
Probab=97.63 E-value=0.00025 Score=63.90 Aligned_cols=93 Identities=15% Similarity=0.086 Sum_probs=58.6
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| ||..|.++|+.|+++|+.|+++.+..... . . ...+-+. .....+.
T Consensus 2 ~k~vlItGa------------------s~giG~~~a~~l~~~G~~V~~~~~~~~~~--~---~--~~~~~~~-~~~~~~~ 55 (256)
T PRK12743 2 AQVAIVTAS------------------DSGIGKACALLLAQQGFDIGITWHSDEEG--A---K--ETAEEVR-SHGVRAE 55 (256)
T ss_pred CCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCCChHH--H---H--HHHHHHH-hcCCceE
Confidence 389999999 99999999999999999998886532210 0 0 0000000 0011222
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
+... .+.++.++.+.+.++.+.++..|++||+|++..+.
T Consensus 56 ~~~~------Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~ 94 (256)
T PRK12743 56 IRQL------DLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKA 94 (256)
T ss_pred EEEc------cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 2211 22344666666666677788899999999986643
No 53
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.63 E-value=0.00025 Score=63.83 Aligned_cols=86 Identities=19% Similarity=0.209 Sum_probs=55.4
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+| ||..|.++|+.|+++|+.|+++.+.... ....+.. ..+.. ..++
T Consensus 7 ~k~~lItGa------------------s~gIG~~~a~~l~~~G~~v~~~~~~~~~--~~~~l~~-~~~~~------~~~D 59 (255)
T PRK06463 7 GKVALITGG------------------TRGIGRAIAEAFLREGAKVAVLYNSAEN--EAKELRE-KGVFT------IKCD 59 (255)
T ss_pred CCEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEeCCcHH--HHHHHHh-CCCeE------EEec
Confidence 399999999 9999999999999999999987654211 0000000 00000 1112
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
+. +..++.+.+.++.+.++..|++||+|++..+
T Consensus 60 l~-----------~~~~~~~~~~~~~~~~~~id~li~~ag~~~~ 92 (255)
T PRK06463 60 VG-----------NRDQVKKSKEVVEKEFGRVDVLVNNAGIMYL 92 (255)
T ss_pred CC-----------CHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence 22 3345555555556667889999999998643
No 54
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.00023 Score=63.86 Aligned_cols=89 Identities=16% Similarity=0.198 Sum_probs=56.4
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|++|||+| ||..|.++|+.|+++|+.|+++.+... +. . ...+-+. .....+..
T Consensus 7 k~~lItGa------------------s~giG~~ia~~l~~~G~~v~~~~r~~~--~~----~--~~~~~~~-~~~~~~~~ 59 (254)
T PRK07478 7 KVAIITGA------------------SSGIGRAAAKLFAREGAKVVVGARRQA--EL----D--QLVAEIR-AEGGEAVA 59 (254)
T ss_pred CEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEeCCHH--HH----H--HHHHHHH-hcCCcEEE
Confidence 99999999 999999999999999999999876421 10 0 0000000 00011211
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
... .+.+..++.+.+.++.+.++..|++|++|++..
T Consensus 60 ~~~------D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 95 (254)
T PRK07478 60 LAG------DVRDEAYAKALVALAVERFGGLDIAFNNAGTLG 95 (254)
T ss_pred EEc------CCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 111 112335555566566677788999999999864
No 55
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.63 E-value=0.00027 Score=63.47 Aligned_cols=92 Identities=11% Similarity=0.078 Sum_probs=57.9
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+| ||.+|.++|+.|++.|++|+++.+.....+ ...+-+. .....+.
T Consensus 9 ~k~~lItGa------------------s~giG~~ia~~L~~~G~~vvl~~r~~~~~~--------~~~~~l~-~~~~~~~ 61 (254)
T PRK08085 9 GKNILITGS------------------AQGIGFLLATGLAEYGAEIIINDITAERAE--------LAVAKLR-QEGIKAH 61 (254)
T ss_pred CCEEEEECC------------------CChHHHHHHHHHHHcCCEEEEEcCCHHHHH--------HHHHHHH-hcCCeEE
Confidence 399999999 999999999999999999999876422100 0000000 0001111
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
.... .+.++..+.+.+..+.+.++..|++||+|++....
T Consensus 62 ~~~~------Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 100 (254)
T PRK08085 62 AAPF------NVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRH 100 (254)
T ss_pred EEec------CCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCC
Confidence 1111 12244556666655566778899999999986543
No 56
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.00032 Score=64.85 Aligned_cols=98 Identities=13% Similarity=0.123 Sum_probs=57.4
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCC-ccchhhhhcccccce
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPD-DAFLECFEVTEESAV 121 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~-~~~~~~~~~~~~~~i 121 (292)
+|++|||+| ||..|.++|+.|++.|+.|+++....+..+..+.... ....+-+. .....+
T Consensus 6 ~k~~lITGa------------------s~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~ 66 (286)
T PRK07791 6 GRVVIVTGA------------------GGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIV-AAGGEA 66 (286)
T ss_pred CCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHH-hcCCce
Confidence 399999999 8999999999999999999988654211000000000 00000000 001111
Q ss_pred EEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 122 QGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 122 ~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
.+.. ..+.+..++.+.+.++.+.++..|++|++|++..
T Consensus 67 ~~~~------~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~ 104 (286)
T PRK07791 67 VANG------DDIADWDGAANLVDAAVETFGGLDVLVNNAGILR 104 (286)
T ss_pred EEEe------CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 1111 1222445556666666677889999999999854
No 57
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.00022 Score=66.23 Aligned_cols=94 Identities=19% Similarity=0.118 Sum_probs=57.3
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhh-cc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFE-VT 116 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~-~~ 116 (292)
++.| |+||||+| ||.+|.++|+.|+++|+.|+++.+...... ...+-+. ..
T Consensus 13 ~~~~--k~vlItGa------------------s~gIG~~~a~~l~~~G~~vi~~~r~~~~~~--------~~~~~l~~~~ 64 (306)
T PRK06197 13 DQSG--RVAVVTGA------------------NTGLGYETAAALAAKGAHVVLAVRNLDKGK--------AAAARITAAT 64 (306)
T ss_pred cCCC--CEEEEcCC------------------CCcHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHHHHhC
Confidence 4544 99999999 999999999999999999998876421100 0000000 00
Q ss_pred cccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 117 EESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 117 ~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
....+.+... .+.+..++.+.+.++.+.++..|++||+|++..
T Consensus 65 ~~~~~~~~~~------Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~ 107 (306)
T PRK06197 65 PGADVTLQEL------DLTSLASVRAAADALRAAYPRIDLLINNAGVMY 107 (306)
T ss_pred CCCceEEEEC------CCCCHHHHHHHHHHHHhhCCCCCEEEECCcccc
Confidence 0011222111 122334555555555566788999999999853
No 58
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.00029 Score=65.43 Aligned_cols=94 Identities=16% Similarity=0.114 Sum_probs=59.3
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
+++| |+||||+| ||..|.++|+.|+++|+.|+++.+..... . ...+.+ ..
T Consensus 6 ~l~g--k~vlItGa------------------s~gIG~~ia~~l~~~G~~V~~~~r~~~~l------~--~~~~~l--~~ 55 (296)
T PRK05872 6 SLAG--KVVVVTGA------------------ARGIGAELARRLHARGAKLALVDLEEAEL------A--ALAAEL--GG 55 (296)
T ss_pred CCCC--CEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCCHHHH------H--HHHHHh--cC
Confidence 4555 99999999 99999999999999999998887642100 0 000000 00
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
...+.... ..+.+..++.+.+.++.+.++..|++|++|++..+.
T Consensus 56 ~~~~~~~~------~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~ 99 (296)
T PRK05872 56 DDRVLTVV------ADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGG 99 (296)
T ss_pred CCcEEEEE------ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCc
Confidence 00111000 112233555566656666778899999999997754
No 59
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.62 E-value=0.00032 Score=63.80 Aligned_cols=94 Identities=13% Similarity=0.056 Sum_probs=56.8
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCC-ccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFS-SGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVT 116 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~S-SG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~ 116 (292)
++.| |++|||+| | |+.+|.++|+.|+++|+.|+++++...... ...++....
T Consensus 4 ~~~~--k~~lItGa-----------------~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~--------~~~~~~~~~ 56 (257)
T PRK08594 4 SLEG--KTYVVMGV-----------------ANKRSIAWGIARSLHNAGAKLVFTYAGERLEK--------EVRELADTL 56 (257)
T ss_pred ccCC--CEEEEECC-----------------CCCCCHHHHHHHHHHHCCCEEEEecCcccchH--------HHHHHHHHc
Confidence 3444 99999999 2 289999999999999999998865311100 000000000
Q ss_pred cccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 117 EESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 117 ~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
....+.... ..+.+..++.+.+.++.+.++..|++|++|++.
T Consensus 57 ~~~~~~~~~------~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~ 98 (257)
T PRK08594 57 EGQESLLLP------CDVTSDEEITACFETIKEEVGVIHGVAHCIAFA 98 (257)
T ss_pred CCCceEEEe------cCCCCHHHHHHHHHHHHHhCCCccEEEECcccC
Confidence 001111111 122244556666666667789999999999875
No 60
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.61 E-value=0.00035 Score=62.84 Aligned_cols=88 Identities=17% Similarity=0.169 Sum_probs=56.0
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| ||..|.++|+.|+++|+.|+++.+....... ..+.+ ...+.
T Consensus 6 ~~~vlItGa------------------s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~--------~~~~~----~~~~~ 55 (257)
T PRK07067 6 GKVALLTGA------------------ASGIGEAVAERYLAEGARVVIADIKPARARL--------AALEI----GPAAI 55 (257)
T ss_pred CCEEEEeCC------------------CchHHHHHHHHHHHcCCEEEEEcCCHHHHHH--------HHHHh----CCceE
Confidence 389999999 9999999999999999999998764321000 00000 01111
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
... ..+.+..++.+.+....+.++..|++||+|++.-+
T Consensus 56 ~~~------~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~ 93 (257)
T PRK07067 56 AVS------LDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDM 93 (257)
T ss_pred EEE------ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence 111 11112345555555556667889999999998643
No 61
>PRK06182 short chain dehydrogenase; Validated
Probab=97.60 E-value=0.00015 Score=65.99 Aligned_cols=86 Identities=19% Similarity=0.139 Sum_probs=57.0
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| ||..|.++|+.|+++|+.|+.+.+....... +.. ..+.. ..++
T Consensus 3 ~k~vlItGa------------------sggiG~~la~~l~~~G~~V~~~~r~~~~l~~---~~~-~~~~~------~~~D 54 (273)
T PRK06182 3 KKVALVTGA------------------SSGIGKATARRLAAQGYTVYGAARRVDKMED---LAS-LGVHP------LSLD 54 (273)
T ss_pred CCEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHh-CCCeE------EEee
Confidence 389999999 9999999999999999999988764221000 000 00100 1122
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
+. +..++.+.+.++.+.++..|++|++|++..+.
T Consensus 55 v~-----------~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~ 88 (273)
T PRK06182 55 VT-----------DEASIKAAVDTIIAEEGRIDVLVNNAGYGSYG 88 (273)
T ss_pred CC-----------CHHHHHHHHHHHHHhcCCCCEEEECCCcCCCC
Confidence 22 33455555555566678899999999998665
No 62
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.00031 Score=61.96 Aligned_cols=80 Identities=19% Similarity=0.132 Sum_probs=54.1
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| ||..|.++|+.|+++|+.|+.+.+.... + ++. ++ ..++
T Consensus 3 ~k~vlItG~------------------s~~iG~~ia~~l~~~G~~v~~~~r~~~~-~----~~~----~~------~~~D 49 (234)
T PRK07577 3 SRTVLVTGA------------------TKGIGLALSLRLANLGHQVIGIARSAID-D----FPG----EL------FACD 49 (234)
T ss_pred CCEEEEECC------------------CCcHHHHHHHHHHHCCCEEEEEeCCccc-c----cCc----eE------EEee
Confidence 389999999 9999999999999999999999875321 1 110 00 1123
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
+. +...+.+.+.++.+.. ..|++||+|++....
T Consensus 50 ~~-----------~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~ 82 (234)
T PRK07577 50 LA-----------DIEQTAATLAQINEIH-PVDAIVNNVGIALPQ 82 (234)
T ss_pred CC-----------CHHHHHHHHHHHHHhC-CCcEEEECCCCCCCC
Confidence 32 2244444444444444 579999999987654
No 63
>PRK08643 acetoin reductase; Validated
Probab=97.60 E-value=0.0003 Score=63.10 Aligned_cols=92 Identities=15% Similarity=0.163 Sum_probs=56.4
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+| ||..|.++|+.|+++|+.|+++.+...... ....-+. .....+.
T Consensus 2 ~k~~lItGa------------------s~giG~~la~~l~~~G~~v~~~~r~~~~~~--------~~~~~~~-~~~~~~~ 54 (256)
T PRK08643 2 SKVALVTGA------------------GQGIGFAIAKRLVEDGFKVAIVDYNEETAQ--------AAADKLS-KDGGKAI 54 (256)
T ss_pred CCEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHHH-hcCCeEE
Confidence 389999999 999999999999999999999886421100 0000000 0001111
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
... ..+.+...+.+.+.++.+.++..|++||+|++....
T Consensus 55 ~~~------~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 93 (256)
T PRK08643 55 AVK------ADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTT 93 (256)
T ss_pred EEE------CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 111 111233455555555566678899999999986544
No 64
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.60 E-value=0.00042 Score=61.23 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=32.5
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+++ |++|||+| ||..|.++|+.|+++|++|+++.+.
T Consensus 3 l~~--k~~lVtGa------------------s~~iG~~ia~~l~~~G~~v~~~~r~ 38 (235)
T PRK06550 3 FMT--KTVLITGA------------------ASGIGLAQARAFLAQGAQVYGVDKQ 38 (235)
T ss_pred CCC--CEEEEcCC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 444 99999999 9999999999999999999988764
No 65
>PRK12827 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.00033 Score=61.98 Aligned_cols=95 Identities=18% Similarity=0.153 Sum_probs=56.7
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
+++|||+| ||..|.++|+.|+++|++|+++.+.....+. .+. ...+-+. .....+.+
T Consensus 7 ~~ilItGa------------------sg~iG~~la~~l~~~g~~v~~~~~~~~~~~~--~~~--~~~~~~~-~~~~~~~~ 63 (249)
T PRK12827 7 RRVLITGG------------------SGGLGRAIAVRLAADGADVIVLDIHPMRGRA--EAD--AVAAGIE-AAGGKALG 63 (249)
T ss_pred CEEEEECC------------------CChHHHHHHHHHHHCCCeEEEEcCcccccHH--HHH--HHHHHHH-hcCCcEEE
Confidence 89999999 9999999999999999999998753221110 000 0000000 00112222
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
... .+.+...+.+.+....+.++..|++||+|++.+..
T Consensus 64 ~~~------Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~ 101 (249)
T PRK12827 64 LAF------DVRDFAATRAALDAGVEEFGRLDILVNNAGIATDA 101 (249)
T ss_pred EEc------cCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 211 12233455555545555567889999999987643
No 66
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.59 E-value=0.00026 Score=63.38 Aligned_cols=94 Identities=18% Similarity=0.168 Sum_probs=58.2
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
++++ |+||||+| ||..|.++|+.|+++|+.|+++.+...... ...+.+. ..
T Consensus 5 ~l~~--k~vlItGa------------------s~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~--------~~~~~~~-~~ 55 (252)
T PRK07035 5 DLTG--KIALVTGA------------------SRGIGEAIAKLLAQQGAHVIVSSRKLDGCQ--------AVADAIV-AA 55 (252)
T ss_pred ccCC--CEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHHH-hc
Confidence 3544 99999999 999999999999999999999986421100 0011000 00
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
...+..... .+.++.++.+.+.++.+.++..|++||+|++..+
T Consensus 56 ~~~~~~~~~------D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~ 98 (252)
T PRK07035 56 GGKAEALAC------HIGEMEQIDALFAHIRERHGRLDILVNNAAANPY 98 (252)
T ss_pred CCeEEEEEc------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence 011111111 1123355555555566777889999999997543
No 67
>PRK07985 oxidoreductase; Provisional
Probab=97.59 E-value=0.00033 Score=65.12 Aligned_cols=94 Identities=18% Similarity=0.113 Sum_probs=58.0
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
++++ |++|||+| ||..|.++|+.|+++|++|+++.+...... +. ...+.+. ..
T Consensus 46 ~~~~--k~vlITGa------------------s~gIG~aia~~L~~~G~~Vi~~~~~~~~~~----~~--~~~~~~~-~~ 98 (294)
T PRK07985 46 RLKD--RKALVTGG------------------DSGIGRAAAIAYAREGADVAISYLPVEEED----AQ--DVKKIIE-EC 98 (294)
T ss_pred ccCC--CEEEEECC------------------CCcHHHHHHHHHHHCCCEEEEecCCcchhh----HH--HHHHHHH-Hc
Confidence 3554 99999999 999999999999999999988754321100 00 0000000 00
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
...+.... ..+.+...+.+.+.++.+.++..|++||+|+.+
T Consensus 99 ~~~~~~~~------~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~ 139 (294)
T PRK07985 99 GRKAVLLP------GDLSDEKFARSLVHEAHKALGGLDIMALVAGKQ 139 (294)
T ss_pred CCeEEEEE------ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 11121111 112234566666666677788999999999875
No 68
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=97.58 E-value=0.00026 Score=63.14 Aligned_cols=83 Identities=16% Similarity=0.049 Sum_probs=55.6
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+| ||..|.++|+.|+++|++|+++.+.. . +. .. ..+.. ..++
T Consensus 8 ~k~vlItGa------------------s~~iG~~la~~l~~~G~~v~~~~~~~-~-~~---~~--~~~~~------~~~D 56 (252)
T PRK08220 8 GKTVWVTGA------------------AQGIGYAVALAFVEAGAKVIGFDQAF-L-TQ---ED--YPFAT------FVLD 56 (252)
T ss_pred CCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEecch-h-hh---cC--CceEE------EEec
Confidence 399999999 99999999999999999999998753 1 10 01 00000 0112
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
+. +..++.+.+.+..+.++..|++||+|++.++.
T Consensus 57 ~~-----------~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 90 (252)
T PRK08220 57 VS-----------DAAAVAQVCQRLLAETGPLDVLVNAAGILRMG 90 (252)
T ss_pred CC-----------CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 21 22344444545566678899999999987654
No 69
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.58 E-value=0.00037 Score=61.18 Aligned_cols=89 Identities=18% Similarity=0.166 Sum_probs=56.3
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| ||..|.++|+.|+++|+.|+++.+...... ....-+. ...+.
T Consensus 7 ~k~vlItGa------------------tg~iG~~la~~l~~~G~~v~~~~r~~~~~~--------~~~~~~~---~~~~~ 57 (239)
T PRK12828 7 GKVVAITGG------------------FGGLGRATAAWLAARGARVALIGRGAAPLS--------QTLPGVP---ADALR 57 (239)
T ss_pred CCEEEEECC------------------CCcHhHHHHHHHHHCCCeEEEEeCChHhHH--------HHHHHHh---hcCce
Confidence 399999999 999999999999999999999987422100 0000000 00111
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
+.. ..+.++.++.+.+.++.+.++..|++||+|+...+
T Consensus 58 ~~~------~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~ 95 (239)
T PRK12828 58 IGG------IDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVW 95 (239)
T ss_pred EEE------eecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCc
Confidence 111 11223455555555555667889999999997643
No 70
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.58 E-value=0.00027 Score=63.01 Aligned_cols=93 Identities=14% Similarity=0.088 Sum_probs=57.8
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc-ccce
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE-ESAV 121 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~-~~~i 121 (292)
+|++|||+| ||.+|.++|+.|+++|+.|+++.+.....+ .....+.... ...+
T Consensus 2 ~k~vlItGa------------------s~giG~~la~~l~~~g~~v~~~~r~~~~~~--------~~~~~~~~~~~~~~~ 55 (248)
T PRK08251 2 RQKILITGA------------------SSGLGAGMAREFAAKGRDLALCARRTDRLE--------ELKAELLARYPGIKV 55 (248)
T ss_pred CCEEEEECC------------------CCHHHHHHHHHHHHcCCEEEEEeCCHHHHH--------HHHHHHHhhCCCceE
Confidence 389999999 999999999999999999998876421100 0000000000 0112
Q ss_pred EEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 122 QGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 122 ~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
.+... .+.+..++.+.+.+..+.++..|++|++|++++..
T Consensus 56 ~~~~~------D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 95 (248)
T PRK08251 56 AVAAL------DVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGA 95 (248)
T ss_pred EEEEc------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 22111 11233455555555566678899999999998764
No 71
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.00034 Score=65.78 Aligned_cols=100 Identities=13% Similarity=0.059 Sum_probs=59.2
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCc--cchhhhhc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDD--AFLECFEV 115 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~--~~~~~~~~ 115 (292)
+++| |++|||+| |+..|.++|++|++.|+.|+++++.....+.....++. ...+.+.
T Consensus 5 ~l~~--k~~lITGg------------------s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~- 63 (305)
T PRK08303 5 PLRG--KVALVAGA------------------TRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVT- 63 (305)
T ss_pred CCCC--CEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHH-
Confidence 4544 99999999 88999999999999999999987642211000000000 0001110
Q ss_pred ccccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEee-ccc
Q 022803 116 TEESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAA-AVS 164 (292)
Q Consensus 116 ~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aA-AVs 164 (292)
.....+... ...+.+..++.+.+.++.+.++..|++|++| ++.
T Consensus 64 ~~~~~~~~~------~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~ 107 (305)
T PRK08303 64 AAGGRGIAV------QVDHLVPEQVRALVERIDREQGRLDILVNDIWGGE 107 (305)
T ss_pred hcCCceEEE------EcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccc
Confidence 000111111 1122344666666666677789999999999 653
No 72
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.00015 Score=65.81 Aligned_cols=88 Identities=17% Similarity=0.180 Sum_probs=56.0
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+++||||+| ||..|.++|+.|+++|+.|+++.+...... .....+ ..+.
T Consensus 5 ~~~ilVtGa------------------sggiG~~la~~l~~~G~~v~~~~r~~~~~~--------~~~~~~-----~~~~ 53 (273)
T PRK07825 5 GKVVAITGG------------------ARGIGLATARALAALGARVAIGDLDEALAK--------ETAAEL-----GLVV 53 (273)
T ss_pred CCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEECCHHHHH--------HHHHHh-----ccce
Confidence 389999999 999999999999999999988876421100 000000 0011
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
+.. ..+.+..++.+.+..+.+.++..|++|++|++..+.
T Consensus 54 ~~~------~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~ 92 (273)
T PRK07825 54 GGP------LDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVG 92 (273)
T ss_pred EEE------ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 110 111233455555555556678899999999997654
No 73
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.00039 Score=62.61 Aligned_cols=89 Identities=10% Similarity=-0.006 Sum_probs=54.9
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|++|||+| ||.+|.++|+.++++|+.|+++.+.....+ .....+ ....+.+
T Consensus 2 k~vlItGa------------------sg~iG~~la~~l~~~G~~V~~~~r~~~~~~--------~~~~~~---~~~~~~~ 52 (260)
T PRK08267 2 KSIFITGA------------------ASGIGRATALLFAAEGWRVGAYDINEAGLA--------ALAAEL---GAGNAWT 52 (260)
T ss_pred cEEEEeCC------------------CchHHHHHHHHHHHCCCeEEEEeCCHHHHH--------HHHHHh---cCCceEE
Confidence 78999999 999999999999999999999876422100 000000 0011211
Q ss_pred eecccccccchhHHHHHHHHHHHHHhh-cCCCceEEEeecccCCc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRS-LGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~-~~~~d~~i~aAAVsDf~ 167 (292)
... .+.++.++.+.+..+.+. .++.|++||+|++.+..
T Consensus 53 ~~~------D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~ 91 (260)
T PRK08267 53 GAL------DVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGG 91 (260)
T ss_pred EEe------cCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCC
Confidence 111 112334555555444443 57789999999987653
No 74
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.56 E-value=0.00025 Score=63.38 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=31.8
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|+||||+| +|.+|.++|+.|+++|+.|+++.+.
T Consensus 12 ~k~vlItG~------------------~g~iG~~la~~l~~~G~~Vi~~~r~ 45 (247)
T PRK08945 12 DRIILVTGA------------------GDGIGREAALTYARHGATVILLGRT 45 (247)
T ss_pred CCEEEEeCC------------------CchHHHHHHHHHHHCCCcEEEEeCC
Confidence 399999999 9999999999999999999998875
No 75
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.00025 Score=63.04 Aligned_cols=33 Identities=21% Similarity=0.328 Sum_probs=30.9
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|+||||+| +|..|.++|++|+++|+.|+++.+.
T Consensus 7 k~vlItGa------------------sg~iG~~la~~l~~~g~~v~~~~r~ 39 (249)
T PRK06500 7 KTALITGG------------------TSGIGLETARQFLAEGARVAITGRD 39 (249)
T ss_pred CEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEecCC
Confidence 99999999 9999999999999999999988764
No 76
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.56 E-value=0.00037 Score=61.72 Aligned_cols=92 Identities=20% Similarity=0.175 Sum_probs=57.0
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| ||..|.++|+.|+++|+.|+.+.+.....+ .....+. .....+.
T Consensus 6 ~~~ilItGa------------------sg~iG~~l~~~l~~~g~~V~~~~r~~~~~~--------~~~~~l~-~~~~~~~ 58 (251)
T PRK12826 6 GRVALVTGA------------------ARGIGRAIAVRLAADGAEVIVVDICGDDAA--------ATAELVE-AAGGKAR 58 (251)
T ss_pred CCEEEEcCC------------------CCcHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHHH-hcCCeEE
Confidence 389999999 999999999999999999999887522100 0000000 0001122
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
+... .+.+...+.+.+..+...++..|++||+|+..++.
T Consensus 59 ~~~~------Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~ 97 (251)
T PRK12826 59 ARQV------DVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLT 97 (251)
T ss_pred EEEC------CCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 2211 11122444444444455678899999999988764
No 77
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.0004 Score=62.21 Aligned_cols=90 Identities=13% Similarity=0.114 Sum_probs=57.1
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
.+++ +++|||+| +|..|.++|+.|+++|+.|+.+.+.....+. ..+...
T Consensus 8 ~~~~--~~vlItGa------------------~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~--------~~~~~~--- 56 (264)
T PRK12829 8 PLDG--LRVLVTGG------------------ASGIGRAIAEAFAEAGARVHVCDVSEAALAA--------TAARLP--- 56 (264)
T ss_pred ccCC--CEEEEeCC------------------CCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH--------HHHHHh---
Confidence 3554 99999999 9999999999999999999888874321110 000000
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
...+.+... .+.+...+.+.+.++.+.++..|++||+|++.
T Consensus 57 ~~~~~~~~~------D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~ 97 (264)
T PRK12829 57 GAKVTATVA------DVADPAQVERVFDTAVERFGGLDVLVNNAGIA 97 (264)
T ss_pred cCceEEEEc------cCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 001111111 11233455555555556678899999999986
No 78
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.56 E-value=0.00042 Score=61.71 Aligned_cols=92 Identities=22% Similarity=0.209 Sum_probs=56.3
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
+++|||+| ||..|.++|+.|+++|+.|+++...... + . . ...+.+. .....+.+
T Consensus 5 ~~vlItGa------------------~g~iG~~~a~~l~~~g~~v~~~~~r~~~-~-~---~--~~~~~~~-~~~~~~~~ 58 (250)
T PRK08063 5 KVALVTGS------------------SRGIGKAIALRLAEEGYDIAVNYARSRK-A-A---E--ETAEEIE-ALGRKALA 58 (250)
T ss_pred CEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEcCCCHH-H-H---H--HHHHHHH-hcCCeEEE
Confidence 89999999 9999999999999999999876443221 0 0 0 0000000 00111221
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
... .+.+..++.+.+.+..+.++..|++||+|+.+...
T Consensus 59 ~~~------D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 96 (250)
T PRK08063 59 VKA------NVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLR 96 (250)
T ss_pred EEc------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 111 11133555555555566678899999999987654
No 79
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.55 E-value=0.0005 Score=60.56 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=55.7
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| ||..|.++|+.|+++||.|+++.+... +.. . ...+.+. .....+.
T Consensus 5 ~~~vlItG~------------------sg~iG~~l~~~l~~~G~~v~~~~~~~~--~~~---~--~~~~~~~-~~~~~~~ 58 (248)
T PRK05557 5 GKVALVTGA------------------SRGIGRAIAERLAAQGANVVINYASSE--AGA---E--ALVAEIG-ALGGKAL 58 (248)
T ss_pred CCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCCch--hHH---H--HHHHHHH-hcCCceE
Confidence 389999999 999999999999999999988876422 100 0 0000000 0011222
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
+... .+.+...+.+.+.++.+.++..|++||+|+..+..
T Consensus 59 ~~~~------Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 97 (248)
T PRK05557 59 AVQG------DVSDAESVERAVDEAKAEFGGVDILVNNAGITRDN 97 (248)
T ss_pred EEEc------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 2111 11122344444444455567889999999987654
No 80
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.00046 Score=62.98 Aligned_cols=88 Identities=16% Similarity=0.150 Sum_probs=56.5
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| ||.+|.++|+.|+++|+.|+++.+...... ...+.+ ...+.
T Consensus 3 ~k~vlItGa------------------sg~iG~~~a~~l~~~g~~V~~~~r~~~~~~--------~~~~~~----~~~~~ 52 (275)
T PRK08263 3 EKVWFITGA------------------SRGFGRAWTEAALERGDRVVATARDTATLA--------DLAEKY----GDRLL 52 (275)
T ss_pred CCEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEECCHHHHH--------HHHHhc----cCCee
Confidence 389999999 999999999999999999999887522100 000000 01111
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
... ..+.+...+.+.+.++.+.++..|++||+|++.-.
T Consensus 53 ~~~------~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~ 90 (275)
T PRK08263 53 PLA------LDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLF 90 (275)
T ss_pred EEE------ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccc
Confidence 111 11123355555555556667889999999998643
No 81
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.55 E-value=0.00038 Score=63.15 Aligned_cols=93 Identities=12% Similarity=0.097 Sum_probs=56.7
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCc-cHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSS-GHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVT 116 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SS-G~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~ 116 (292)
+++| |++|||+| |+ +.+|.++|+.|+++|+.|+++++.....+. ++-+..+
T Consensus 7 ~~~~--k~~lItGa-----------------s~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~---------~~~~~~~ 58 (258)
T PRK07533 7 PLAG--KRGLVVGI-----------------ANEQSIAWGCARAFRALGAELAVTYLNDKARPY---------VEPLAEE 58 (258)
T ss_pred ccCC--CEEEEECC-----------------CCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHH---------HHHHHHh
Confidence 4555 99999999 34 489999999999999999988764211010 0000000
Q ss_pred cccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 117 EESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 117 ~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
...+.... ..+.+..++.+.+.++.+.++..|++|++|++..
T Consensus 59 -~~~~~~~~------~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~ 100 (258)
T PRK07533 59 -LDAPIFLP------LDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAP 100 (258)
T ss_pred -hccceEEe------cCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCC
Confidence 00000110 1122335555555556677889999999999753
No 82
>PRK09186 flagellin modification protein A; Provisional
Probab=97.55 E-value=0.0003 Score=62.83 Aligned_cols=90 Identities=13% Similarity=0.103 Sum_probs=54.7
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcc-cccce
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVT-EESAV 121 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~-~~~~i 121 (292)
+|+||||+| ||..|.++|+.|+++|+.|+++.+...... ...+-+... ....+
T Consensus 4 ~k~vlItGa------------------s~giG~~~a~~l~~~g~~v~~~~r~~~~~~--------~~~~~l~~~~~~~~~ 57 (256)
T PRK09186 4 GKTILITGA------------------GGLIGSALVKAILEAGGIVIAADIDKEALN--------ELLESLGKEFKSKKL 57 (256)
T ss_pred CCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEecChHHHH--------HHHHHHHhhcCCCce
Confidence 399999999 999999999999999999999876421100 000000000 00111
Q ss_pred EEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 122 QGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 122 ~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
.+.. ..+.+..++.+.+.++.+.++..|++||+|++.
T Consensus 58 ~~~~------~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~ 94 (256)
T PRK09186 58 SLVE------LDITDQESLEEFLSKSAEKYGKIDGAVNCAYPR 94 (256)
T ss_pred eEEE------ecCCCHHHHHHHHHHHHHHcCCccEEEECCccc
Confidence 1111 112233455555555556678899999999753
No 83
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00035 Score=61.96 Aligned_cols=92 Identities=17% Similarity=0.159 Sum_probs=56.0
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+| +|..|.++|+.|+++|++|+++.+...... ...+.+. .....+.
T Consensus 7 ~~~vlItGa------------------~g~iG~~la~~l~~~G~~v~~~~r~~~~~~--------~~~~~~~-~~~~~~~ 59 (250)
T PRK12939 7 GKRALVTGA------------------ARGLGAAFAEALAEAGATVAFNDGLAAEAR--------ELAAALE-AAGGRAH 59 (250)
T ss_pred CCEEEEeCC------------------CChHHHHHHHHHHHcCCEEEEEeCCHHHHH--------HHHHHHH-hcCCcEE
Confidence 399999999 999999999999999999998865321000 0000000 0001122
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
+... .+.+...+.+.+.++.+.++..|++||+|++.+..
T Consensus 60 ~~~~------Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 98 (250)
T PRK12939 60 AIAA------DLADPASVQRFFDAAAAALGGLDGLVNNAGITNSK 98 (250)
T ss_pred EEEc------cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 2111 11233444444444455568899999999997653
No 84
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.54 E-value=8.2e-05 Score=66.99 Aligned_cols=95 Identities=18% Similarity=0.101 Sum_probs=57.9
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
++++ |++|||+| +|..|.++|+.|+++|+.|+++.+.....+ ...+.+. ..
T Consensus 9 ~~~~--k~ilItGa------------------~g~IG~~la~~l~~~G~~V~~~~r~~~~~~--------~~~~~i~-~~ 59 (259)
T PRK08213 9 DLSG--KTALVTGG------------------SRGLGLQIAEALGEAGARVVLSARKAEELE--------EAAAHLE-AL 59 (259)
T ss_pred CcCC--CEEEEECC------------------CchHHHHHHHHHHHcCCEEEEEeCCHHHHH--------HHHHHHH-hc
Confidence 3555 99999999 999999999999999999998886422100 0000000 00
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
...+.... ..+.+...+.+.+.++.+.++..|++||+|+..+..
T Consensus 60 ~~~~~~~~------~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~ 103 (259)
T PRK08213 60 GIDALWIA------ADVADEADIERLAEETLERFGHVDILVNNAGATWGA 103 (259)
T ss_pred CCeEEEEE------ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 01111111 111233455555555556667889999999986543
No 85
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.53 E-value=0.00042 Score=62.54 Aligned_cols=89 Identities=19% Similarity=0.123 Sum_probs=55.5
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
++||||+| ||.+|.++|+.|+++|+.|+++.+..... . ...+-+. ....+..
T Consensus 1 m~vlItGa------------------s~gIG~aia~~l~~~G~~V~~~~r~~~~~------~--~~~~~l~--~~~~~~~ 52 (259)
T PRK08340 1 MNVLVTAS------------------SRGIGFNVARELLKKGARVVISSRNEENL------E--KALKELK--EYGEVYA 52 (259)
T ss_pred CeEEEEcC------------------CcHHHHHHHHHHHHcCCEEEEEeCCHHHH------H--HHHHHHH--hcCCceE
Confidence 47999999 99999999999999999999987642110 0 0000000 0011111
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
.. ..+.+..++.+.+.++.+.++..|++|++|++...
T Consensus 53 ~~------~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~ 89 (259)
T PRK08340 53 VK------ADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRC 89 (259)
T ss_pred EE------cCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 11 11223355556665566678899999999998643
No 86
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00032 Score=66.66 Aligned_cols=95 Identities=18% Similarity=0.180 Sum_probs=60.7
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
++++ |+||||+| ||..|.++|+.|+++|+.|+++.+..... . ...+-+. ..
T Consensus 5 ~l~~--k~vlITGa------------------s~gIG~~la~~la~~G~~Vvl~~R~~~~l------~--~~~~~l~-~~ 55 (334)
T PRK07109 5 PIGR--QVVVITGA------------------SAGVGRATARAFARRGAKVVLLARGEEGL------E--ALAAEIR-AA 55 (334)
T ss_pred CCCC--CEEEEECC------------------CCHHHHHHHHHHHHCCCEEEEEECCHHHH------H--HHHHHHH-Hc
Confidence 4544 99999999 99999999999999999999988642100 0 0000000 00
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
...+.... ..+.|..++.+.+..+.+.++..|++|++|++..+.
T Consensus 56 g~~~~~v~------~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~ 99 (334)
T PRK07109 56 GGEALAVV------ADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFG 99 (334)
T ss_pred CCcEEEEE------ecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCC
Confidence 01121111 122244566666655667788999999999997765
No 87
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.53 E-value=0.00038 Score=62.55 Aligned_cols=90 Identities=17% Similarity=0.161 Sum_probs=56.4
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc-ccceE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE-ESAVQ 122 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~-~~~i~ 122 (292)
|+||||+| +|..|.++|++|+++|+.|+++.+...... ...+-+.... ...+.
T Consensus 3 k~ilItG~------------------~~~IG~~la~~l~~~g~~vi~~~r~~~~~~--------~~~~~~~~~~~~~~~~ 56 (259)
T PRK12384 3 QVAVVIGG------------------GQTLGAFLCHGLAEEGYRVAVADINSEKAA--------NVAQEINAEYGEGMAY 56 (259)
T ss_pred CEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEECCHHHHH--------HHHHHHHHhcCCceeE
Confidence 89999999 999999999999999999999886421100 0000000000 01122
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
.... .+.+..++.+.+.++.+.++..|++||+|+.+.
T Consensus 57 ~~~~------D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~ 93 (259)
T PRK12384 57 GFGA------DATSEQSVLALSRGVDEIFGRVDLLVYNAGIAK 93 (259)
T ss_pred EEEc------cCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 2111 122335566666666667788999999998764
No 88
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.52 E-value=0.00047 Score=60.66 Aligned_cols=92 Identities=20% Similarity=0.222 Sum_probs=55.8
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|+||||+| ||..|.++|+.|+++|+.|+++.+...... . ....... .....+.+
T Consensus 7 ~~vlItGa------------------sg~iG~~l~~~l~~~g~~v~~~~~~~~~~~-----~--~~~~~~~-~~~~~~~~ 60 (249)
T PRK12825 7 RVALVTGA------------------ARGLGRAIALRLARAGADVVVHYRSDEEAA-----E--ELVEAVE-ALGRRAQA 60 (249)
T ss_pred CEEEEeCC------------------CchHHHHHHHHHHHCCCeEEEEeCCCHHHH-----H--HHHHHHH-hcCCceEE
Confidence 89999999 999999999999999999988776532100 0 0000000 00112222
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
... .+.+...+.+.+.+..+.++..|++||+|+.+++.
T Consensus 61 ~~~------D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~ 98 (249)
T PRK12825 61 VQA------DVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDK 98 (249)
T ss_pred EEC------CcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCC
Confidence 211 11233444454444455567889999999977654
No 89
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.52 E-value=0.00011 Score=67.01 Aligned_cols=89 Identities=15% Similarity=0.112 Sum_probs=54.8
Q ss_pred CceEEEecCCcccccCCCceeeeecCCcc--HHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccc
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSG--HRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESA 120 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG--~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~ 120 (292)
+|++|||+| |+ .+|.++|+.|+++||.|++.++..........+....+... ...
T Consensus 8 ~k~~lITGa------------------s~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~-----~~~ 64 (260)
T PRK06603 8 GKKGLITGI------------------ANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNF-----VSE 64 (260)
T ss_pred CcEEEEECC------------------CCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCce-----EEE
Confidence 399999999 54 69999999999999999987653110000000000000000 001
Q ss_pred eEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 121 VQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 121 i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
+++ .+..++.+.+.++.+.++..|++|++|++..
T Consensus 65 ~Dv-----------~~~~~v~~~~~~~~~~~g~iDilVnnag~~~ 98 (260)
T PRK06603 65 LDV-----------TNPKSISNLFDDIKEKWGSFDFLLHGMAFAD 98 (260)
T ss_pred ccC-----------CCHHHHHHHHHHHHHHcCCccEEEEccccCC
Confidence 223 2445666666666777899999999999754
No 90
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.00042 Score=62.03 Aligned_cols=89 Identities=10% Similarity=0.065 Sum_probs=55.1
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| ||..|.++|+.|+++|+.|+++.+..... . ....-+. .....+.
T Consensus 5 ~k~vlItGa------------------~~~IG~~la~~l~~~G~~V~~~~r~~~~~------~--~~~~~~~-~~~~~~~ 57 (258)
T PRK07890 5 GKVVVVSGV------------------GPGLGRTLAVRAARAGADVVLAARTAERL------D--EVAAEID-DLGRRAL 57 (258)
T ss_pred CCEEEEECC------------------CCcHHHHHHHHHHHcCCEEEEEeCCHHHH------H--HHHHHHH-HhCCceE
Confidence 399999999 99999999999999999999887632100 0 0000000 0001111
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
.... .+.+...+.+.+..+.+.++..|++||+|+..
T Consensus 58 ~~~~------D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~ 93 (258)
T PRK07890 58 AVPT------DITDEDQCANLVALALERFGRVDALVNNAFRV 93 (258)
T ss_pred EEec------CCCCHHHHHHHHHHHHHHcCCccEEEECCccC
Confidence 1111 11233555556656667778899999999863
No 91
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.51 E-value=0.00038 Score=62.20 Aligned_cols=90 Identities=18% Similarity=0.100 Sum_probs=55.4
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|+||||+| ||..|.++|+.|+++|++|+++.+..... . . ...+.+.. ....+.+
T Consensus 3 k~vlItG~------------------sg~iG~~la~~L~~~g~~vi~~~r~~~~~--~---~--~~~~~~~~-~~~~~~~ 56 (256)
T PRK12745 3 PVALVTGG------------------RRGIGLGIARALAAAGFDLAINDRPDDEE--L---A--ATQQELRA-LGVEVIF 56 (256)
T ss_pred cEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEecCchhH--H---H--HHHHHHHh-cCCceEE
Confidence 88999999 99999999999999999999988643210 0 0 00000000 0011222
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
... .+.+..++.+.+.++.+.++..|++||+|+++.
T Consensus 57 ~~~------D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~ 92 (256)
T PRK12745 57 FPA------DVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGV 92 (256)
T ss_pred EEe------cCCCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence 111 112334555555555566788999999999764
No 92
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.51 E-value=0.00042 Score=61.51 Aligned_cols=87 Identities=14% Similarity=0.137 Sum_probs=54.5
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
++||||+| ||..|.++|+.|+++|++|+++.+...... .....+. ....+..
T Consensus 6 ~~vlItGa------------------sg~iG~~l~~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~--~~~~~~~ 57 (251)
T PRK07231 6 KVAIVTGA------------------SSGIGEGIARRFAAEGARVVVTDRNEEAAE--------RVAAEIL--AGGRAIA 57 (251)
T ss_pred cEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHHh--cCCeEEE
Confidence 99999999 999999999999999999999987532100 0000000 0011111
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
... .+.+..+..+.+.++.+.++..|++||+|++.
T Consensus 58 ~~~------D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~ 92 (251)
T PRK07231 58 VAA------DVSDEADVEAAVAAALERFGSVDILVNNAGTT 92 (251)
T ss_pred EEC------CCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 111 11122444555555556678899999999874
No 93
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.51 E-value=0.00043 Score=63.02 Aligned_cols=93 Identities=11% Similarity=-0.013 Sum_probs=56.7
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccc
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEE 118 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~ 118 (292)
++| |+||||+|. |++..|.++|+.|+++|+.|++.++...... .++-+.. ..
T Consensus 4 ~~~--k~~lITGa~----------------~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~-~~ 55 (261)
T PRK08690 4 LQG--KKILITGMI----------------SERSIAYGIAKACREQGAELAFTYVVDKLEE---------RVRKMAA-EL 55 (261)
T ss_pred cCC--cEEEEECCC----------------CCCcHHHHHHHHHHHCCCEEEEEcCcHHHHH---------HHHHHHh-cc
Confidence 545 999999971 1568999999999999999998764311100 0000000 00
Q ss_pred cceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 119 SAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 119 ~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
...... ...+.+..++.+.+.++.+.++..|++|++|++..
T Consensus 56 ~~~~~~------~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~ 96 (261)
T PRK08690 56 DSELVF------RCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAP 96 (261)
T ss_pred CCceEE------ECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCC
Confidence 000000 01122445666666666777899999999999863
No 94
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=97.51 E-value=0.00056 Score=60.90 Aligned_cols=91 Identities=18% Similarity=0.214 Sum_probs=56.6
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+| ||.+|.++|+.|+++|+.|+++.+.... . .+ ...+-+. .....+.
T Consensus 6 ~~~~lItG~------------------s~~iG~~la~~l~~~g~~v~~~~~~~~~-~----~~--~~~~~l~-~~~~~~~ 59 (247)
T PRK12935 6 GKVAIVTGG------------------AKGIGKAITVALAQEGAKVVINYNSSKE-A----AE--NLVNELG-KEGHDVY 59 (247)
T ss_pred CCEEEEECC------------------CCHHHHHHHHHHHHcCCEEEEEcCCcHH-H----HH--HHHHHHH-hcCCeEE
Confidence 399999999 9999999999999999999877654211 0 00 0000000 0011122
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
+.+. .+.+...+.+.+.++.+.++..|++||+|+...
T Consensus 60 ~~~~------D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~ 96 (247)
T PRK12935 60 AVQA------DVSKVEDANRLVEEAVNHFGKVDILVNNAGITR 96 (247)
T ss_pred EEEC------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 2211 112334555666666677788999999999854
No 95
>PRK09134 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.00043 Score=62.32 Aligned_cols=93 Identities=22% Similarity=0.264 Sum_probs=57.7
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+| ||.+|.++|+.|+++|+.|+++.+...... . .....+. .....+.
T Consensus 9 ~k~vlItGa------------------s~giG~~la~~l~~~g~~v~~~~~~~~~~~-----~--~~~~~~~-~~~~~~~ 62 (258)
T PRK09134 9 PRAALVTGA------------------ARRIGRAIALDLAAHGFDVAVHYNRSRDEA-----E--ALAAEIR-ALGRRAV 62 (258)
T ss_pred CCEEEEeCC------------------CcHHHHHHHHHHHHCCCEEEEEeCCCHHHH-----H--HHHHHHH-hcCCeEE
Confidence 489999999 899999999999999999988765421000 0 0000000 0011222
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
+... .+.++..+.+.+.++.+.++..|++||+|++.+..
T Consensus 63 ~~~~------Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~ 101 (258)
T PRK09134 63 ALQA------DLADEAEVRALVARASAALGPITLLVNNASLFEYD 101 (258)
T ss_pred EEEc------CCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCC
Confidence 2111 12244566666655566678899999999987643
No 96
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.00059 Score=61.24 Aligned_cols=89 Identities=19% Similarity=0.250 Sum_probs=57.3
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|++|||+| ||..|.++|+.|+++|+.|+++.+...... ...+.+ ....+.+
T Consensus 3 k~ilItGa------------------t~~iG~~la~~L~~~g~~v~~~~r~~~~~~--------~~~~~~---~~~~~~~ 53 (257)
T PRK07074 3 RTALVTGA------------------AGGIGQALARRFLAAGDRVLALDIDAAALA--------AFADAL---GDARFVP 53 (257)
T ss_pred CEEEEECC------------------cchHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHh---cCCceEE
Confidence 89999999 999999999999999999999876422100 000000 0011221
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
.. ..+.+..++.+.+.++.+.++..|++||+|+++...
T Consensus 54 ~~------~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~ 91 (257)
T PRK07074 54 VA------CDLTDAASLAAALANAAAERGPVDVLVANAGAARAA 91 (257)
T ss_pred EE------ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 11 112234556566666666678899999999987643
No 97
>PRK09135 pteridine reductase; Provisional
Probab=97.49 E-value=0.00049 Score=60.87 Aligned_cols=92 Identities=22% Similarity=0.276 Sum_probs=55.4
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+++||||+| +|..|.++|+.|+++|+.|+.+.+...... + .....+.......+.
T Consensus 6 ~~~vlItGa------------------~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~-----~--~~~~~~~~~~~~~~~ 60 (249)
T PRK09135 6 AKVALITGG------------------ARRIGAAIARTLHAAGYRVAIHYHRSAAEA-----D--ALAAELNALRPGSAA 60 (249)
T ss_pred CCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEcCCCHHHH-----H--HHHHHHHhhcCCceE
Confidence 389999999 999999999999999999999886422100 0 000000000001111
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
... ..+.+...+.+.+..+.+.++..|++||+|++..
T Consensus 61 ~~~------~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~ 97 (249)
T PRK09135 61 ALQ------ADLLDPDALPELVAACVAAFGRLDALVNNASSFY 97 (249)
T ss_pred EEE------cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 111 1112334555555555566788999999999754
No 98
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.49 E-value=0.00052 Score=64.19 Aligned_cols=94 Identities=17% Similarity=0.205 Sum_probs=57.6
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
+++| |++|||+| +|..|.++|++|+++|+.|+++........ . ...+-+. ..
T Consensus 9 ~l~~--k~~lVTGa------------------s~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~-----~--~~~~~i~-~~ 60 (306)
T PRK07792 9 DLSG--KVAVVTGA------------------AAGLGRAEALGLARLGATVVVNDVASALDA-----S--DVLDEIR-AA 60 (306)
T ss_pred CCCC--CEEEEECC------------------CChHHHHHHHHHHHCCCEEEEecCCchhHH-----H--HHHHHHH-hc
Confidence 4655 99999999 899999999999999999998865321100 0 0011000 00
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
...+.... ..+.+...+.+.+..+.+ ++..|++||+|++...
T Consensus 61 g~~~~~~~------~Dv~d~~~~~~~~~~~~~-~g~iD~li~nAG~~~~ 102 (306)
T PRK07792 61 GAKAVAVA------GDISQRATADELVATAVG-LGGLDIVVNNAGITRD 102 (306)
T ss_pred CCeEEEEe------CCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCC
Confidence 11121111 112233455555555566 8899999999998653
No 99
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.49 E-value=0.00046 Score=61.52 Aligned_cols=92 Identities=16% Similarity=0.148 Sum_probs=56.7
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| ||..|.++|+.|+++|+.|+++.+...... ....-+. .....+.
T Consensus 4 ~~~vlItG~------------------sg~iG~~la~~l~~~g~~v~~~~r~~~~~~--------~~~~~~~-~~~~~~~ 56 (258)
T PRK12429 4 GKVALVTGA------------------ASGIGLEIALALAKEGAKVVIADLNDEAAA--------AAAEALQ-KAGGKAI 56 (258)
T ss_pred CCEEEEECC------------------CchHHHHHHHHHHHCCCeEEEEeCCHHHHH--------HHHHHHH-hcCCcEE
Confidence 399999999 999999999999999999999887522100 0000000 0001121
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
.... .+.+..++.+.+..+.+.++..|++||+|+...+.
T Consensus 57 ~~~~------Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~ 95 (258)
T PRK12429 57 GVAM------DVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVA 95 (258)
T ss_pred EEEc------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 1111 11233455555555555677899999999976543
No 100
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00016 Score=65.30 Aligned_cols=90 Identities=16% Similarity=0.063 Sum_probs=56.1
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
++||||+| ||..|.++|+.|+++|+.|+++.+...... ...+.+. ....+..
T Consensus 3 ~~vlItGa------------------s~gIG~~la~~l~~~G~~v~~~~r~~~~~~--------~~~~~~~--~~~~~~~ 54 (257)
T PRK07024 3 LKVFITGA------------------SSGIGQALAREYARQGATLGLVARRTDALQ--------AFAARLP--KAARVSV 54 (257)
T ss_pred CEEEEEcC------------------CcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHhcc--cCCeeEE
Confidence 89999999 999999999999999999999876421100 0000000 0001111
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
... .+.+...+.+.+.++.+.++..|++||+|++.+..
T Consensus 55 ~~~------Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~ 92 (257)
T PRK07024 55 YAA------DVRDADALAAAAADFIAAHGLPDVVIANAGISVGT 92 (257)
T ss_pred EEc------CCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCc
Confidence 111 11133455555555566678889999999987643
No 101
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00051 Score=62.85 Aligned_cols=95 Identities=14% Similarity=0.149 Sum_probs=56.9
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCc--cchhhhhcccccce
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDD--AFLECFEVTEESAV 121 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~--~~~~~~~~~~~~~i 121 (292)
|++|||+| ||..|.++|+.|+++|+.|+++.+.....+ .++.. ...+.+. .....+
T Consensus 7 k~vlItGa------------------s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~l~~~~~~~~-~~~~~~ 64 (273)
T PRK08278 7 KTLFITGA------------------SRGIGLAIALRAARDGANIVIAAKTAEPHP---KLPGTIHTAAEEIE-AAGGQA 64 (273)
T ss_pred CEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeccccccc---chhhHHHHHHHHHH-hcCCce
Confidence 99999999 999999999999999999999887532111 01100 0000000 001112
Q ss_pred EEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 122 QGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 122 ~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
.+.. ..+.+..++.+.+.+..+.++..|++||+|++..+
T Consensus 65 ~~~~------~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~ 103 (273)
T PRK08278 65 LPLV------GDVRDEDQVAAAVAKAVERFGGIDICVNNASAINL 103 (273)
T ss_pred EEEE------ecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCC
Confidence 1111 11123345555555556667889999999997654
No 102
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00019 Score=65.38 Aligned_cols=91 Identities=18% Similarity=0.201 Sum_probs=56.2
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhh-cccccce
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFE-VTEESAV 121 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~-~~~~~~i 121 (292)
+|++|||+| ||.+|.++|+.++++||.|+.+.+.....+. ..+... ...+..+
T Consensus 3 ~k~~lItGa------------------sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~ 56 (280)
T PRK06914 3 KKIAIVTGA------------------SSGFGLLTTLELAKKGYLVIATMRNPEKQEN--------LLSQATQLNLQQNI 56 (280)
T ss_pred CCEEEEECC------------------CchHHHHHHHHHHhCCCEEEEEeCCHHHHHH--------HHHHHHhcCCCCce
Confidence 389999999 9999999999999999999988764221110 000000 0000122
Q ss_pred EEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 122 QGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 122 ~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
.+... .+.+..++.+ +.++.+.++..|++||+|+++..
T Consensus 57 ~~~~~------D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~ 94 (280)
T PRK06914 57 KVQQL------DVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANG 94 (280)
T ss_pred eEEec------CCCCHHHHHH-HHHHHHhcCCeeEEEECCccccc
Confidence 22111 1223345555 55556667889999999988653
No 103
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.48 E-value=0.00059 Score=61.54 Aligned_cols=94 Identities=16% Similarity=0.205 Sum_probs=57.0
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
++++ |++|||+| +|..|.++|+.|+++|+.|+++++... +... ...+-+. ..
T Consensus 4 ~~~~--k~~lItGa------------------~~gIG~~ia~~l~~~G~~vvi~~~~~~--~~~~-----~~~~~l~-~~ 55 (261)
T PRK08936 4 DLEG--KVVVITGG------------------STGLGRAMAVRFGKEKAKVVINYRSDE--EEAN-----DVAEEIK-KA 55 (261)
T ss_pred CCCC--CEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEeCCCH--HHHH-----HHHHHHH-Hc
Confidence 4555 99999999 999999999999999999988766322 1000 0000000 00
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
...+.+... .+.+..++.+.+....+.++..|++||+|++..
T Consensus 56 ~~~~~~~~~------Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~ 97 (261)
T PRK08936 56 GGEAIAVKG------DVTVESDVVNLIQTAVKEFGTLDVMINNAGIEN 97 (261)
T ss_pred CCeEEEEEe------cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 011111111 111234555555555666788999999999764
No 104
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00036 Score=63.57 Aligned_cols=37 Identities=32% Similarity=0.384 Sum_probs=32.9
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+++| |++|||+| ||..|.++|+.|+++|+.|+++.+.
T Consensus 5 ~l~~--k~~lItGa------------------s~gIG~aia~~l~~~G~~V~~~~r~ 41 (263)
T PRK08339 5 DLSG--KLAFTTAS------------------SKGIGFGVARVLARAGADVILLSRN 41 (263)
T ss_pred CCCC--CEEEEeCC------------------CCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 3555 99999999 9999999999999999999988764
No 105
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.48 E-value=0.00031 Score=68.81 Aligned_cols=130 Identities=12% Similarity=0.095 Sum_probs=74.8
Q ss_pred hhhhhhccCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHH--HHHHHHHCC
Q 022803 8 EIESFFDSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAA--STEHLIKMG 85 (292)
Q Consensus 8 ~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~--iAe~~~~~G 85 (292)
.++.|...+.-|..=+.-+..-.++...+....+++|++|||+| |+.+|.+ ||++| ..|
T Consensus 6 ~~rg~i~~~~hp~gc~~~v~~qi~~~~~~~~~~~ggK~aLVTGa------------------SsGIGlA~~IA~al-~~G 66 (398)
T PRK13656 6 KIRGFICTTAHPVGCEANVKEQIEYVKAQGPIANGPKKVLVIGA------------------SSGYGLASRIAAAF-GAG 66 (398)
T ss_pred cccceeECCCCCHHHHHHHHHHHHHHHhcCCcCCCCCEEEEECC------------------CchHhHHHHHHHHH-HcC
Confidence 45566666666666555555555666554444345799999999 7889999 89999 999
Q ss_pred CeEEEEeeCCCCCCccCCC------CCccchhhhhcccccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEE
Q 022803 86 YAVIFLYRRGTCEPYCSSL------PDDAFLECFEVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYL 159 (292)
Q Consensus 86 a~V~~i~g~~~~~P~~~~l------~~~~~~~~~~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~ 159 (292)
|+|+.++.... +..... ....+.+... .....+.... ..|.+-....+.+..+.+.++..|++||
T Consensus 67 A~Vi~v~~~~~--~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~------~DVss~E~v~~lie~I~e~~G~IDiLVn 137 (398)
T PRK13656 67 ADTLGVFFEKP--GTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSIN------GDAFSDEIKQKVIELIKQDLGQVDLVVY 137 (398)
T ss_pred CeEEEEecCcc--hhhhcccccccchHHHHHHHHH-hcCCceEEEE------cCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 99988874211 000000 0000111111 0001111110 1111224455555556677899999999
Q ss_pred eecccC
Q 022803 160 AAAVSD 165 (292)
Q Consensus 160 aAAVsD 165 (292)
+||-+.
T Consensus 138 SaA~~~ 143 (398)
T PRK13656 138 SLASPR 143 (398)
T ss_pred CCccCC
Confidence 999885
No 106
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.47 E-value=0.00048 Score=61.78 Aligned_cols=95 Identities=17% Similarity=0.109 Sum_probs=60.5
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
+++| |+||||+| +|..|.++|+.|+++|+.|+++.+..... . ....-+. ..
T Consensus 8 ~~~~--k~ilItGa------------------s~~IG~~la~~l~~~G~~v~~~~r~~~~~------~--~~~~~~~-~~ 58 (256)
T PRK06124 8 SLAG--QVALVTGS------------------ARGLGFEIARALAGAGAHVLVNGRNAATL------E--AAVAALR-AA 58 (256)
T ss_pred CCCC--CEEEEECC------------------CchHHHHHHHHHHHcCCeEEEEeCCHHHH------H--HHHHHHH-hc
Confidence 4555 99999999 99999999999999999999998742110 0 0000000 00
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
...+.+... .+.+..++.+.+.++...++..|++||+|++.+..
T Consensus 59 ~~~~~~~~~------Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 102 (256)
T PRK06124 59 GGAAEALAF------DIADEEAVAAAFARIDAEHGRLDILVNNVGARDRR 102 (256)
T ss_pred CCceEEEEc------cCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 111222211 12234566666666666678899999999987643
No 107
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.47 E-value=0.00055 Score=60.72 Aligned_cols=90 Identities=23% Similarity=0.204 Sum_probs=56.5
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
+++|||+| ||..|.++|+.|+.+|+.|+++.+..... . ...+.+. .....+.+
T Consensus 8 ~~vlVtG~------------------sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~------~--~~~~~~~-~~~~~~~~ 60 (239)
T PRK07666 8 KNALITGA------------------GRGIGRAVAIALAKEGVNVGLLARTEENL------K--AVAEEVE-AYGVKVVI 60 (239)
T ss_pred CEEEEEcC------------------CchHHHHHHHHHHHCCCEEEEEeCCHHHH------H--HHHHHHH-HhCCeEEE
Confidence 89999999 99999999999999999999998753210 0 0000000 00112222
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
... .+.+...+.+.+..+.+.++..|++||+|++...
T Consensus 61 ~~~------D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 97 (239)
T PRK07666 61 ATA------DVSDYEEVTAAIEQLKNELGSIDILINNAGISKF 97 (239)
T ss_pred EEC------CCCCHHHHHHHHHHHHHHcCCccEEEEcCccccC
Confidence 211 1113345555555555667889999999998654
No 108
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.46 E-value=0.00056 Score=62.87 Aligned_cols=89 Identities=10% Similarity=0.071 Sum_probs=54.7
Q ss_pred CceEEEecCCcccccCCCceeeeecCCcc--HHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccc
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSG--HRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESA 120 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG--~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~ 120 (292)
+|++|||+| |+ .+|.++|+.|++.||.|++.++...... .++-+.......
T Consensus 7 ~k~~lVTGa------------------s~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~---------~~~~~~~~~g~~ 59 (271)
T PRK06505 7 GKRGLIMGV------------------ANDHSIAWGIAKQLAAQGAELAFTYQGEALGK---------RVKPLAESLGSD 59 (271)
T ss_pred CCEEEEeCC------------------CCCCcHHHHHHHHHHhCCCEEEEecCchHHHH---------HHHHHHHhcCCc
Confidence 399999999 64 8999999999999999998865311000 000000000000
Q ss_pred eEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 121 VQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 121 i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
+ .. ...|.|..+..+.+.++.+.++..|++|++|++..
T Consensus 60 ~-~~------~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~ 97 (271)
T PRK06505 60 F-VL------PCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSD 97 (271)
T ss_pred e-EE------eCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCC
Confidence 0 00 01122335555556566677899999999999864
No 109
>PRK12744 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.00068 Score=61.02 Aligned_cols=95 Identities=8% Similarity=0.064 Sum_probs=57.4
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| +|..|.++|+.|+++|++|+++......... ... ...+.+.. .+..+.
T Consensus 8 ~k~vlItGa------------------~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~--~~~--~~~~~l~~-~~~~~~ 64 (257)
T PRK12744 8 GKVVLIAGG------------------AKNLGGLIARDLAAQGAKAVAIHYNSAASKA--DAE--ETVAAVKA-AGAKAV 64 (257)
T ss_pred CcEEEEECC------------------CchHHHHHHHHHHHCCCcEEEEecCCccchH--HHH--HHHHHHHH-hCCcEE
Confidence 399999999 9999999999999999998888754211000 000 00010000 011222
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
... ..+.+..++.+.+..+.+.++..|++||+|++...
T Consensus 65 ~~~------~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~ 102 (257)
T PRK12744 65 AFQ------ADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLK 102 (257)
T ss_pred EEe------cCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCC
Confidence 111 11224456666666666667889999999998543
No 110
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.46 E-value=0.00055 Score=62.33 Aligned_cols=93 Identities=22% Similarity=0.292 Sum_probs=56.8
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
++++ |++|||+| +|.+|.++|+.|+++|+.|+++.+...... ...+-+. ..
T Consensus 7 ~~~~--k~vlVtGa------------------s~giG~~ia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~-~~ 57 (278)
T PRK08277 7 SLKG--KVAVITGG------------------GGVLGGAMAKELARAGAKVAILDRNQEKAE--------AVVAEIK-AA 57 (278)
T ss_pred ccCC--CEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHHH-hc
Confidence 3444 99999999 999999999999999999999886421100 0000000 00
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
...+..... .+.+..++.+.+.+..+.++..|++||+|++..
T Consensus 58 ~~~~~~~~~------Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~ 99 (278)
T PRK08277 58 GGEALAVKA------DVLDKESLEQARQQILEDFGPCDILINGAGGNH 99 (278)
T ss_pred CCeEEEEEC------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 011211111 111334455555555666789999999999753
No 111
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.45 E-value=0.00056 Score=60.67 Aligned_cols=84 Identities=18% Similarity=0.150 Sum_probs=54.3
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|++|||+| ||.+|.++|+.|+++|+.|+++.+... +. .+.+.. .++..
T Consensus 3 k~vlItGa------------------s~gIG~~ia~~l~~~G~~V~~~~r~~~--~~---------~~~~~~---~~~~~ 50 (236)
T PRK06483 3 APILITGA------------------GQRIGLALAWHLLAQGQPVIVSYRTHY--PA---------IDGLRQ---AGAQC 50 (236)
T ss_pred ceEEEECC------------------CChHHHHHHHHHHHCCCeEEEEeCCch--hH---------HHHHHH---cCCEE
Confidence 89999999 999999999999999999999876422 10 000000 01111
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
.. ..+.+..++.+.+.+..+.++..|++||+|++..
T Consensus 51 ~~------~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 86 (236)
T PRK06483 51 IQ------ADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWL 86 (236)
T ss_pred EE------cCCCCHHHHHHHHHHHHhhCCCccEEEECCcccc
Confidence 10 1111334555555555666788999999998743
No 112
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.45 E-value=0.00065 Score=60.93 Aligned_cols=86 Identities=16% Similarity=0.103 Sum_probs=54.2
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
++||||+| ||..|.++|+.|++.|++|+++.+.....+. ..... ...+..
T Consensus 1 ~~vlItGa------------------sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~--------~~~~~----~~~~~~ 50 (248)
T PRK10538 1 MIVLVTGA------------------TAGFGECITRRFIQQGHKVIATGRRQERLQE--------LKDEL----GDNLYI 50 (248)
T ss_pred CEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHh----ccceEE
Confidence 47899999 9999999999999999999998764211000 00000 011211
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
... .+.++.++.+.+.+..+.++..|++||+|+++.
T Consensus 51 ~~~------Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~ 86 (248)
T PRK10538 51 AQL------DVRNRAAIEEMLASLPAEWRNIDVLVNNAGLAL 86 (248)
T ss_pred EEe------cCCCHHHHHHHHHHHHHHcCCCCEEEECCCccC
Confidence 111 122335555555555566788999999999853
No 113
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.00051 Score=62.54 Aligned_cols=85 Identities=15% Similarity=0.106 Sum_probs=55.3
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|+||||+| ||..|.++|+.|+++|+.|+++.+...... .+.. ..... -.+++
T Consensus 2 k~vlItGa------------------sggiG~~la~~l~~~G~~V~~~~r~~~~~~---~~~~-~~~~~------~~~Dl 53 (274)
T PRK05693 2 PVVLITGC------------------SSGIGRALADAFKAAGYEVWATARKAEDVE---ALAA-AGFTA------VQLDV 53 (274)
T ss_pred CEEEEecC------------------CChHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHH-CCCeE------EEeeC
Confidence 78999999 999999999999999999998876421100 0000 00000 01222
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
. +..++.+.+..+.+.++..|++||+|++..+.
T Consensus 54 ~-----------~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 86 (274)
T PRK05693 54 N-----------DGAALARLAEELEAEHGGLDVLINNAGYGAMG 86 (274)
T ss_pred C-----------CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 2 23455555555566678899999999986544
No 114
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.00064 Score=60.53 Aligned_cols=34 Identities=32% Similarity=0.385 Sum_probs=31.2
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|++|||+| ||..|.++|+.|+++|++|+++.+.
T Consensus 6 ~k~vlItGa------------------sggiG~~l~~~l~~~G~~V~~~~r~ 39 (248)
T PRK07806 6 GKTALVTGS------------------SRGIGADTAKILAGAGAHVVVNYRQ 39 (248)
T ss_pred CcEEEEECC------------------CCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 399999999 9999999999999999999988764
No 115
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.00041 Score=66.06 Aligned_cols=92 Identities=14% Similarity=0.107 Sum_probs=57.6
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| ||.+|.++|+.|+++|+.|+++.+..... . ...+-+. .....+.
T Consensus 7 ~k~vlITGA------------------s~GIG~aia~~la~~G~~Vvl~~R~~~~l------~--~~~~~~~-~~g~~~~ 59 (330)
T PRK06139 7 GAVVVITGA------------------SSGIGQATAEAFARRGARLVLAARDEEAL------Q--AVAEECR-ALGAEVL 59 (330)
T ss_pred CCEEEEcCC------------------CCHHHHHHHHHHHHCCCEEEEEECCHHHH------H--HHHHHHH-hcCCcEE
Confidence 399999999 99999999999999999999887642110 0 0000000 0001121
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
+.. ..+.|..++.+.+..+.+.++..|++|++|++..+.
T Consensus 60 ~~~------~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~ 98 (330)
T PRK06139 60 VVP------TDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVG 98 (330)
T ss_pred EEE------eeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCC
Confidence 111 122233555555555555668899999999987654
No 116
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.45 E-value=0.00011 Score=68.35 Aligned_cols=93 Identities=20% Similarity=0.228 Sum_probs=57.0
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCC-CccCCCCCccchhhhhcccccce
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCE-PYCSSLPDDAFLECFEVTEESAV 121 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~-P~~~~l~~~~~~~~~~~~~~~~i 121 (292)
++.+|||+. |+..|.++|+.|+++|++|+++.+..... -....+.... ...+
T Consensus 6 ~~~~lITGA------------------SsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~---------~v~v 58 (265)
T COG0300 6 GKTALITGA------------------SSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT---------GVEV 58 (265)
T ss_pred CcEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh---------CceE
Confidence 499999999 99999999999999999999999964310 0000011000 1123
Q ss_pred EEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCcC
Q 022803 122 QGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFYV 168 (292)
Q Consensus 122 ~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~v 168 (292)
.+++.. +.+..+..+......+.....|++|.+|..+.|-+
T Consensus 59 ~vi~~D------Ls~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~ 99 (265)
T COG0300 59 EVIPAD------LSDPEALERLEDELKERGGPIDVLVNNAGFGTFGP 99 (265)
T ss_pred EEEECc------CCChhHHHHHHHHHHhcCCcccEEEECCCcCCccc
Confidence 333221 11112222222122333468999999999999984
No 117
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.45 E-value=0.00055 Score=60.23 Aligned_cols=91 Identities=14% Similarity=0.112 Sum_probs=54.8
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|+||||+| ||..|..+|+.|+++|+.|+++.+...... ...+.+. ....++..
T Consensus 6 ~~ilItGa------------------sg~iG~~l~~~l~~~g~~v~~~~r~~~~~~--------~~~~~~~-~~~~~~~~ 58 (246)
T PRK05653 6 KTALVTGA------------------SRGIGRAIALRLAADGAKVVIYDSNEEAAE--------ALAAELR-AAGGEARV 58 (246)
T ss_pred CEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEeCChhHHH--------HHHHHHH-hcCCceEE
Confidence 89999999 999999999999999999988887522100 0000000 00011211
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
... .+.+-.++.+.+..+...++..|.+||+|+..++.
T Consensus 59 ~~~------D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 96 (246)
T PRK05653 59 LVF------DVSDEAAVRALIEAAVEAFGALDILVNNAGITRDA 96 (246)
T ss_pred EEc------cCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCC
Confidence 111 11122334444444445567889999999987764
No 118
>PRK09242 tropinone reductase; Provisional
Probab=97.44 E-value=0.00036 Score=62.72 Aligned_cols=93 Identities=13% Similarity=0.080 Sum_probs=57.6
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcc-cccce
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVT-EESAV 121 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~-~~~~i 121 (292)
+|++|||+| +|.+|.++|+.++++|++|+++.+...... ...+-+... ....+
T Consensus 9 ~k~~lItGa------------------~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~--------~~~~~l~~~~~~~~~ 62 (257)
T PRK09242 9 GQTALITGA------------------SKGIGLAIAREFLGLGADVLIVARDADALA--------QARDELAEEFPEREV 62 (257)
T ss_pred CCEEEEeCC------------------CchHHHHHHHHHHHcCCEEEEEeCCHHHHH--------HHHHHHHhhCCCCeE
Confidence 399999999 999999999999999999999986421100 000000000 01112
Q ss_pred EEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 122 QGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 122 ~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
..... .+.+..++.+.+.++.+.++..|++|++|++..+.
T Consensus 63 ~~~~~------Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~ 102 (257)
T PRK09242 63 HGLAA------DVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRK 102 (257)
T ss_pred EEEEC------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 11111 11133455555555566788999999999987654
No 119
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.44 E-value=0.00064 Score=62.30 Aligned_cols=90 Identities=10% Similarity=0.026 Sum_probs=53.1
Q ss_pred CceEEEecCCcccccCCCceeeeecCCc-cHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccce
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSS-GHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAV 121 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SS-G~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i 121 (292)
+|++|||+| |+ +.+|.++|+.|++.|+.|++.++.....+....+.. ..-... ...+
T Consensus 6 ~k~~lITGa-----------------s~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~-~~~~~~----~~~~ 63 (262)
T PRK07984 6 GKRILVTGV-----------------ASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAA-QLGSDI----VLPC 63 (262)
T ss_pred CCEEEEeCC-----------------CCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHh-ccCCce----Eeec
Confidence 399999999 23 389999999999999999887653111010000000 000000 0112
Q ss_pred EEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 122 QGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 122 ~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
++. +..++.+.+..+.+.++..|++|++|++.-
T Consensus 64 Dl~-----------~~~~v~~~~~~~~~~~g~iD~linnAg~~~ 96 (262)
T PRK07984 64 DVA-----------EDASIDAMFAELGKVWPKFDGFVHSIGFAP 96 (262)
T ss_pred CCC-----------CHHHHHHHHHHHHhhcCCCCEEEECCccCC
Confidence 222 334455555555667889999999999853
No 120
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.44 E-value=0.00088 Score=59.21 Aligned_cols=88 Identities=18% Similarity=0.054 Sum_probs=53.6
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
++++|||+| ||..|.++|+.|+++|+.|++..+..... . .....+ ...+.
T Consensus 6 ~~~vlItGa------------------~g~iG~~la~~l~~~g~~v~~~~~~~~~~------~--~~~~~~----~~~~~ 55 (245)
T PRK12936 6 GRKALVTGA------------------SGGIGEEIARLLHAQGAIVGLHGTRVEKL------E--ALAAEL----GERVK 55 (245)
T ss_pred CCEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEcCCHHHH------H--HHHHHh----CCceE
Confidence 399999999 99999999999999999887765431100 0 000000 01122
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
+... .+.+...+.+.+.+..+.++..|++||+|++...
T Consensus 56 ~~~~------D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 93 (245)
T PRK12936 56 IFPA------NLSDRDEVKALGQKAEADLEGVDILVNNAGITKD 93 (245)
T ss_pred EEEc------cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 1111 1112234444444455667889999999998653
No 121
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.00049 Score=64.01 Aligned_cols=92 Identities=16% Similarity=0.150 Sum_probs=57.3
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| ||..|.++|+.|+++|++|+++.+..... . ...+.+. .....+.
T Consensus 40 ~k~vlItGa------------------sggIG~~la~~La~~G~~Vi~~~R~~~~l------~--~~~~~l~-~~~~~~~ 92 (293)
T PRK05866 40 GKRILLTGA------------------SSGIGEAAAEQFARRGATVVAVARREDLL------D--AVADRIT-RAGGDAM 92 (293)
T ss_pred CCEEEEeCC------------------CcHHHHHHHHHHHHCCCEEEEEECCHHHH------H--HHHHHHH-hcCCcEE
Confidence 499999999 99999999999999999999988752110 0 0000000 0001111
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
+.. ..+.|..++.+.+..+.+.++..|++|++|++....
T Consensus 93 ~~~------~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~ 131 (293)
T PRK05866 93 AVP------CDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRR 131 (293)
T ss_pred EEE------ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCc
Confidence 111 112233455555555556678899999999987554
No 122
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.00069 Score=61.52 Aligned_cols=94 Identities=19% Similarity=0.122 Sum_probs=57.4
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhc-cc
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEV-TE 117 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~-~~ 117 (292)
+++ |++|||+| ||..|.++|+.|+++|+.|+++.+...... ....-+.. ..
T Consensus 5 ~~~--k~vlItGa------------------sg~IG~~la~~l~~~G~~V~~~~r~~~~~~--------~~~~~l~~~~~ 56 (276)
T PRK05875 5 FQD--RTYLVTGG------------------GSGIGKGVAAGLVAAGAAVMIVGRNPDKLA--------AAAEEIEALKG 56 (276)
T ss_pred CCC--CEEEEECC------------------CcHHHHHHHHHHHHCCCeEEEEeCCHHHHH--------HHHHHHHhccC
Confidence 544 99999999 999999999999999999999886422100 00000000 00
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
...+.+... .+.+..++.+.+.+..+.++..|++||+|+..+.
T Consensus 57 ~~~~~~~~~------Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~ 99 (276)
T PRK05875 57 AGAVRYEPA------DVTDEDQVARAVDAATAWHGRLHGVVHCAGGSET 99 (276)
T ss_pred CCceEEEEc------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccC
Confidence 011221111 1123345555555556667889999999997654
No 123
>PRK06484 short chain dehydrogenase; Validated
Probab=97.43 E-value=0.00058 Score=68.04 Aligned_cols=79 Identities=11% Similarity=0.144 Sum_probs=48.1
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEEeecccccccchhHHHHHHHHHHHHHh
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVSSR 149 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~ 149 (292)
||.+|.++|+.|+++|+.|+++.+...... ...+.+ ...+.... ..+.+..++.+.+.++.+
T Consensus 278 s~gIG~~~a~~l~~~G~~V~~~~r~~~~~~--------~~~~~~----~~~~~~~~------~D~~~~~~~~~~~~~~~~ 339 (520)
T PRK06484 278 ARGIGRAVADRFAAAGDRLLIIDRDAEGAK--------KLAEAL----GDEHLSVQ------ADITDEAAVESAFAQIQA 339 (520)
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHh----CCceeEEE------ccCCCHHHHHHHHHHHHH
Confidence 778999999999999999999886421100 000000 01111110 112233455555555667
Q ss_pred hcCCCceEEEeecccCC
Q 022803 150 SLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 150 ~~~~~d~~i~aAAVsDf 166 (292)
.++..|++||+|++.+.
T Consensus 340 ~~g~id~li~nAg~~~~ 356 (520)
T PRK06484 340 RWGRLDVLVNNAGIAEV 356 (520)
T ss_pred HcCCCCEEEECCCCcCC
Confidence 78899999999998753
No 124
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=97.43 E-value=0.00048 Score=61.31 Aligned_cols=90 Identities=17% Similarity=0.092 Sum_probs=55.7
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|+||||+| ||..|.++|+.|+++|+.|+++.+...... ...+.+.. ....+.+
T Consensus 2 ~~vlItGa------------------~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~--------~~~~~~~~-~~~~~~~ 54 (255)
T TIGR01963 2 KTALVTGA------------------ASGIGLAIALALAAAGANVVVNDLGEAGAE--------AAAKVATD-AGGSVIY 54 (255)
T ss_pred CEEEEcCC------------------cchHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHHHh-cCCceEE
Confidence 78999999 999999999999999999999987532100 00000000 0012222
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
... .+.+..++.+.+..+.+.++..|++||+|+++..
T Consensus 55 ~~~------D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~ 91 (255)
T TIGR01963 55 LVA------DVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHV 91 (255)
T ss_pred EEC------CCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 111 1123345555444445557788999999998754
No 125
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.00086 Score=60.84 Aligned_cols=93 Identities=15% Similarity=0.114 Sum_probs=54.5
Q ss_pred CCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCC-CeEEEEeeCCCCCCccCCCCCccchhhhhccccc
Q 022803 41 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG-YAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEES 119 (292)
Q Consensus 41 ~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~G-a~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~ 119 (292)
|++++||||+| ||.+|.++|++|+++| +.|+++.+..+ +.. . ...+-+......
T Consensus 6 ~~~~~vlItGa------------------s~giG~~la~~l~~~gg~~V~~~~r~~~--~~~---~--~~~~~l~~~~~~ 60 (253)
T PRK07904 6 GNPQTILLLGG------------------TSEIGLAICERYLKNAPARVVLAALPDD--PRR---D--AAVAQMKAAGAS 60 (253)
T ss_pred CCCcEEEEEcC------------------CcHHHHHHHHHHHhcCCCeEEEEeCCcc--hhH---H--HHHHHHHhcCCC
Confidence 35699999999 9999999999999995 99998876432 100 0 000000000001
Q ss_pred ceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 120 AVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 120 ~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
.+.+... .+.++.++.+.+..+.+ .+..|++|++|++..
T Consensus 61 ~v~~~~~------D~~~~~~~~~~~~~~~~-~g~id~li~~ag~~~ 99 (253)
T PRK07904 61 SVEVIDF------DALDTDSHPKVIDAAFA-GGDVDVAIVAFGLLG 99 (253)
T ss_pred ceEEEEe------cCCChHHHHHHHHHHHh-cCCCCEEEEeeecCC
Confidence 1222211 11133455555544454 478999999998853
No 126
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.42 E-value=0.00072 Score=60.17 Aligned_cols=87 Identities=17% Similarity=0.204 Sum_probs=52.8
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+| ||.+|.++|+.|++.|++|+++.+.... . . . ....-+ ..++.
T Consensus 5 ~k~ilItGa------------------s~gIG~~la~~l~~~G~~vv~~~~~~~~-~-~---~--~~~~~~----~~~~~ 55 (253)
T PRK08642 5 EQTVLVTGG------------------SRGLGAAIARAFAREGARVVVNYHQSED-A-A---E--ALADEL----GDRAI 55 (253)
T ss_pred CCEEEEeCC------------------CCcHHHHHHHHHHHCCCeEEEEcCCCHH-H-H---H--HHHHHh----CCceE
Confidence 389999999 9999999999999999999887653211 0 0 0 000000 01121
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCC-CceEEEeeccc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGP-CSMFYLAAAVS 164 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~-~d~~i~aAAVs 164 (292)
+... .+.+..++.+.+.+..+.++. .|++||+|++.
T Consensus 56 ~~~~------D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~ 92 (253)
T PRK08642 56 ALQA------DVTDREQVQAMFATATEHFGKPITTVVNNALAD 92 (253)
T ss_pred EEEc------CCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcc
Confidence 1111 111334555555555555666 89999999864
No 127
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.00068 Score=60.67 Aligned_cols=90 Identities=13% Similarity=0.122 Sum_probs=56.2
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| ||..|.++|+.|+++|++|+++.+.....+ ...+.+. ..+..+.
T Consensus 7 ~k~ilItGa------------------s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--------~~~~~~~-~~~~~~~ 59 (253)
T PRK06172 7 GKVALVTGG------------------AAGIGRATALAFAREGAKVVVADRDAAGGE--------ETVALIR-EAGGEAL 59 (253)
T ss_pred CCEEEEeCC------------------CchHHHHHHHHHHHcCCEEEEEeCCHHHHH--------HHHHHHH-hcCCceE
Confidence 399999999 999999999999999999999887532110 0011000 0011222
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
.... .+.+..++.+.+.++.+.++..|++||+|++..
T Consensus 60 ~~~~------D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~ 96 (253)
T PRK06172 60 FVAC------DVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEI 96 (253)
T ss_pred EEEc------CCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 2111 111224455555555666788999999999864
No 128
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.00086 Score=62.23 Aligned_cols=94 Identities=18% Similarity=0.126 Sum_probs=57.0
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
+++| |+||||+| +|..|.++|+.|+++|+.|+++.+.... .. . ...+.+.- .
T Consensus 43 ~~~~--k~iLItGa------------------sggIG~~la~~l~~~G~~V~l~~r~~~~-~~----~--~~~~~~~~-~ 94 (290)
T PRK06701 43 KLKG--KVALITGG------------------DSGIGRAVAVLFAKEGADIAIVYLDEHE-DA----N--ETKQRVEK-E 94 (290)
T ss_pred CCCC--CEEEEeCC------------------CcHHHHHHHHHHHHCCCEEEEEeCCcch-HH----H--HHHHHHHh-c
Confidence 4544 99999999 9999999999999999999988764211 00 0 00111100 0
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
...+.+... .+.+...+.+.+.++.+.++..|++||+|+.+.
T Consensus 95 ~~~~~~~~~------Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~ 136 (290)
T PRK06701 95 GVKCLLIPG------DVSDEAFCKDAVEETVRELGRLDILVNNAAFQY 136 (290)
T ss_pred CCeEEEEEc------cCCCHHHHHHHHHHHHHHcCCCCEEEECCcccC
Confidence 011211111 111334455555555666788999999998754
No 129
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.00063 Score=61.46 Aligned_cols=90 Identities=18% Similarity=0.155 Sum_probs=54.5
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+++||||+| ||.+|.++|+.++++|+.|+++.+...... ....-+ .....+.
T Consensus 5 ~~~vlItG~------------------s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~--~~~~~~~ 56 (263)
T PRK09072 5 DKRVLLTGA------------------SGGIGQALAEALAAAGARLLLVGRNAEKLE--------ALAARL--PYPGRHR 56 (263)
T ss_pred CCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEECCHHHHH--------HHHHHH--hcCCceE
Confidence 389999999 999999999999999999999987422100 000000 0011222
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
.... .+.+..++.+.+.... .++..|++||+|+...+.
T Consensus 57 ~~~~------D~~d~~~~~~~~~~~~-~~~~id~lv~~ag~~~~~ 94 (263)
T PRK09072 57 WVVA------DLTSEAGREAVLARAR-EMGGINVLINNAGVNHFA 94 (263)
T ss_pred EEEc------cCCCHHHHHHHHHHHH-hcCCCCEEEECCCCCCcc
Confidence 2111 1123344444433333 367889999999986543
No 130
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.40 E-value=0.00085 Score=56.00 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=57.3
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|.||||+| ||.+|.++|+.|+++|+.++++.+.....+... ....-+. .....+.+
T Consensus 1 k~~lItGa------------------~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~-----~l~~~l~-~~~~~~~~ 56 (167)
T PF00106_consen 1 KTVLITGA------------------SSGIGRALARALARRGARVVILTSRSEDSEGAQ-----ELIQELK-APGAKITF 56 (167)
T ss_dssp EEEEEETT------------------TSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHH-----HHHHHHH-HTTSEEEE
T ss_pred CEEEEECC------------------CCHHHHHHHHHHHhcCceEEEEeeecccccccc-----ccccccc-cccccccc
Confidence 68999999 999999999999999887777666541001100 0101111 01123333
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
... .+.+..++.+.+..+....+..|++|++|.+....
T Consensus 57 ~~~------D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~ 94 (167)
T PF00106_consen 57 IEC------DLSDPESIRALIEEVIKRFGPLDILINNAGIFSDG 94 (167)
T ss_dssp EES------ETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSB
T ss_pred ccc------ccccccccccccccccccccccccccccccccccc
Confidence 322 11133455555555566778999999999997744
No 131
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.40 E-value=0.00063 Score=61.19 Aligned_cols=102 Identities=22% Similarity=0.160 Sum_probs=57.2
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCc--cHHHHHHHHHHHHCCCeEEEEeeCCC-CC-CccCCCCCcc-chhhh
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSS--GHRGAASTEHLIKMGYAVIFLYRRGT-CE-PYCSSLPDDA-FLECF 113 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SS--G~~G~~iAe~~~~~Ga~V~~i~g~~~-~~-P~~~~l~~~~-~~~~~ 113 (292)
+++ |+||||+| | |..|.++|+.|+.+|+.|+++.+... .. +....-+... ..+.+
T Consensus 3 l~~--k~vlItGa------------------s~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~ 62 (256)
T PRK12748 3 LMK--KIALVTGA------------------SRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62 (256)
T ss_pred CCC--cEEEEeCC------------------CCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHH
Confidence 444 99999999 6 58999999999999999998876411 00 0000000000 00000
Q ss_pred hcccccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 114 EVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 114 ~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
. .....+..... .+.+..++.+.+.++.+.++..|++||+|++....
T Consensus 63 ~-~~~~~~~~~~~------D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~ 109 (256)
T PRK12748 63 E-SYGVRCEHMEI------DLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHT 109 (256)
T ss_pred H-hcCCeEEEEEC------CCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCC
Confidence 0 00111222111 12233455555555556678899999999986543
No 132
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.39 E-value=0.00082 Score=61.09 Aligned_cols=96 Identities=9% Similarity=0.034 Sum_probs=56.1
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccc
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEE 118 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~ 118 (292)
++| |++|||+|+ +|+..|.++|+.|++.|+.|++.+........ . ..++-+.-..
T Consensus 4 l~~--k~~lItGas----------------~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~----~--~~~~~~~~~~- 58 (258)
T PRK07370 4 LTG--KKALVTGIA----------------NNRSIAWGIAQQLHAAGAELGITYLPDEKGRF----E--KKVRELTEPL- 58 (258)
T ss_pred cCC--cEEEEeCCC----------------CCCchHHHHHHHHHHCCCEEEEEecCcccchH----H--HHHHHHHhcc-
Confidence 444 999999981 03789999999999999999887643210000 0 0011000000
Q ss_pred cceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 119 SAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 119 ~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
..+... ...+.+..++.+.+.++.+.++..|++|++|++..
T Consensus 59 ~~~~~~------~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~ 99 (258)
T PRK07370 59 NPSLFL------PCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAG 99 (258)
T ss_pred CcceEe------ecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccC
Confidence 001010 01122335555556566677889999999999864
No 133
>PRK06720 hypothetical protein; Provisional
Probab=97.38 E-value=0.0011 Score=57.50 Aligned_cols=92 Identities=18% Similarity=0.118 Sum_probs=57.3
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+| +|.+|.++|..|+++|+.|+++.+..... . ....-+. .....+.
T Consensus 16 gk~~lVTGa------------------~~GIG~aia~~l~~~G~~V~l~~r~~~~~------~--~~~~~l~-~~~~~~~ 68 (169)
T PRK06720 16 GKVAIVTGG------------------GIGIGRNTALLLAKQGAKVIVTDIDQESG------Q--ATVEEIT-NLGGEAL 68 (169)
T ss_pred CCEEEEecC------------------CChHHHHHHHHHHHCCCEEEEEECCHHHH------H--HHHHHHH-hcCCcEE
Confidence 399999999 88999999999999999998887532100 0 0000000 0001111
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
... ..+.++.++.+.+.+.++.++..|++|++|++....
T Consensus 69 ~~~------~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~~~ 107 (169)
T PRK06720 69 FVS------YDMEKQGDWQRVISITLNAFSRIDMLFQNAGLYKID 107 (169)
T ss_pred EEE------ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 111 122234555566666677788999999999975543
No 134
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.38 E-value=0.00057 Score=64.03 Aligned_cols=34 Identities=26% Similarity=0.380 Sum_probs=31.4
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|+||||+| ||.+|.++|+.|+++|++|+++.+.
T Consensus 6 ~k~vlVTGa------------------s~gIG~~~a~~L~~~G~~V~~~~r~ 39 (322)
T PRK07453 6 KGTVIITGA------------------SSGVGLYAAKALAKRGWHVIMACRN 39 (322)
T ss_pred CCEEEEEcC------------------CChHHHHHHHHHHHCCCEEEEEECC
Confidence 499999999 9999999999999999999998764
No 135
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.38 E-value=0.00079 Score=59.80 Aligned_cols=91 Identities=18% Similarity=0.230 Sum_probs=55.3
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+| ||..|.++|+.|+++|+.|+++.+...... ...+.+. .....+.
T Consensus 3 ~~~ilItGa------------------s~~iG~~la~~l~~~g~~v~~~~r~~~~~~--------~~~~~~~-~~~~~~~ 55 (250)
T TIGR03206 3 DKTAIVTGG------------------GGGIGGATCRRFAEEGAKVAVFDLNREAAE--------KVAADIR-AKGGNAQ 55 (250)
T ss_pred CCEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEecCCHHHHH--------HHHHHHH-hcCCcEE
Confidence 399999999 999999999999999999998876421100 0000000 0011122
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
+... .+.+..++.+.+....+.++..|++||+|++.+.
T Consensus 56 ~~~~------d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~ 93 (250)
T TIGR03206 56 AFAC------DITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKF 93 (250)
T ss_pred EEEc------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 2211 1112234444444445567788999999998653
No 136
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.37 E-value=0.00021 Score=64.34 Aligned_cols=91 Identities=9% Similarity=0.062 Sum_probs=56.0
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| +|..|.++|+.|+++|+.|+++.+.....+ .....+. .....+.
T Consensus 11 ~k~vlVtG~------------------s~gIG~~la~~l~~~G~~vv~~~r~~~~~~--------~~~~~l~-~~~~~~~ 63 (255)
T PRK06113 11 GKCAIITGA------------------GAGIGKEIAITFATAGASVVVSDINADAAN--------HVVDEIQ-QLGGQAF 63 (255)
T ss_pred CCEEEEECC------------------CchHHHHHHHHHHHCCCeEEEEeCCHHHHH--------HHHHHHH-hcCCcEE
Confidence 399999999 999999999999999999998875421100 0000000 0001111
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
+... .+.+..+..+.+....+.++..|++||+|++...
T Consensus 64 ~~~~------D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~ 101 (255)
T PRK06113 64 ACRC------DITSEQELSALADFALSKLGKVDILVNNAGGGGP 101 (255)
T ss_pred EEEc------cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 1111 1112345555555556667889999999998653
No 137
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.00065 Score=61.76 Aligned_cols=91 Identities=16% Similarity=0.177 Sum_probs=56.2
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccc
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEE 118 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~ 118 (292)
+++ |++|||+| ||..|.++|+.|+.+|+.|+++.+.....+ .....+.. ..
T Consensus 7 ~~~--k~ilItGa------------------sggIG~~la~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~-~~ 57 (264)
T PRK07576 7 FAG--KNVVVVGG------------------TSGINLGIAQAFARAGANVAVASRSQEKVD--------AAVAQLQQ-AG 57 (264)
T ss_pred CCC--CEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHHHH-hC
Confidence 444 99999999 999999999999999999999986422100 00000000 00
Q ss_pred cceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 119 SAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 119 ~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
..+.+... .+.+..++.+.+..+...++..|++|++|++.
T Consensus 58 ~~~~~~~~------Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~ 97 (264)
T PRK07576 58 PEGLGVSA------DVRDYAAVEAAFAQIADEFGPIDVLVSGAAGN 97 (264)
T ss_pred CceEEEEC------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 11111110 11133455555555566678899999999865
No 138
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.36 E-value=0.00092 Score=61.50 Aligned_cols=85 Identities=19% Similarity=0.237 Sum_probs=60.2
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCC-CCccCCCCCccchhhhhcccccceE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTC-EPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~-~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
|.||||+. |...|.++|+.|++.||.|++..+.... .-....+.. ..+.
T Consensus 7 kv~lITGA------------------SSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~------------~~~~ 56 (246)
T COG4221 7 KVALITGA------------------SSGIGEATARALAEAGAKVVLAARREERLEALADEIGA------------GAAL 56 (246)
T ss_pred cEEEEecC------------------cchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc------------CceE
Confidence 89999998 7789999999999999999999987431 110001110 0111
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
.. ...|.|+..+..++......+++.|++|.+|.++
T Consensus 57 ~~------~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~ 92 (246)
T COG4221 57 AL------ALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLA 92 (246)
T ss_pred EE------eeccCCHHHHHHHHHHHHHhhCcccEEEecCCCC
Confidence 10 1234466787788877788899999999999984
No 139
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.36 E-value=0.00068 Score=60.30 Aligned_cols=92 Identities=17% Similarity=0.142 Sum_probs=54.7
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
++||||+| ||..|.++|++|+++|++|+++.++.... .. ..+....- ....+.+
T Consensus 7 ~~vlitGa------------------sg~iG~~l~~~l~~~g~~v~~~~~~~~~~-----~~--~~~~~~~~-~~~~~~~ 60 (252)
T PRK06077 7 KVVVVTGS------------------GRGIGRAIAVRLAKEGSLVVVNAKKRAEE-----MN--ETLKMVKE-NGGEGIG 60 (252)
T ss_pred cEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEeCCChHH-----HH--HHHHHHHH-cCCeeEE
Confidence 99999999 99999999999999999998876542110 00 00000000 0011111
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
.. ..+.+..+..+.+.+..+.++..|++||+|++..+.
T Consensus 61 ~~------~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~ 98 (252)
T PRK06077 61 VL------ADVSTREGCETLAKATIDRYGVADILVNNAGLGLFS 98 (252)
T ss_pred EE------eccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 11 111122344444445556678889999999986544
No 140
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.00049 Score=63.03 Aligned_cols=86 Identities=15% Similarity=0.106 Sum_probs=54.1
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| ||.+|.++|+.|+++|+.|+++.+...... .+.. .++.
T Consensus 4 ~k~vlItGa------------------sggiG~~la~~l~~~G~~Vi~~~r~~~~~~---~l~~------------~~~~ 50 (277)
T PRK05993 4 KRSILITGC------------------SSGIGAYCARALQSDGWRVFATCRKEEDVA---ALEA------------EGLE 50 (277)
T ss_pred CCEEEEeCC------------------CcHHHHHHHHHHHHCCCEEEEEECCHHHHH---HHHH------------CCce
Confidence 389999999 999999999999999999999886422100 0000 0111
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhc-CCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSL-GPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~-~~~d~~i~aAAVsDf~ 167 (292)
.... .+.+..++.+.+..+.+.. +..|++|++|++....
T Consensus 51 ~~~~------Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~ 90 (277)
T PRK05993 51 AFQL------DYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPG 90 (277)
T ss_pred EEEc------cCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCC
Confidence 1110 1113344444444444433 5789999999987654
No 141
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.00059 Score=61.20 Aligned_cols=90 Identities=21% Similarity=0.187 Sum_probs=54.7
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCe-EEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA-VIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~-V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
|+||||+| ||..|..+|+.|+++|++ |+++.+.....+ ...+.+. .....+.
T Consensus 7 k~vlItGa------------------~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~--------~~~~~l~-~~~~~~~ 59 (260)
T PRK06198 7 KVALVTGG------------------TQGLGAAIARAFAERGAAGLVICGRNAEKGE--------AQAAELE-ALGAKAV 59 (260)
T ss_pred cEEEEeCC------------------CchHHHHHHHHHHHCCCCeEEEEcCCHHHHH--------HHHHHHH-hcCCeEE
Confidence 99999999 899999999999999999 887776422111 0000000 0011121
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
.... .+.+..++.+.+..+.+.++..|++||+|+++..
T Consensus 60 ~~~~------D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~ 97 (260)
T PRK06198 60 FVQA------DLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDR 97 (260)
T ss_pred EEEc------cCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCC
Confidence 1111 1112344555555555567889999999998653
No 142
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.35 E-value=0.00082 Score=62.01 Aligned_cols=91 Identities=9% Similarity=0.040 Sum_probs=54.9
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+|+ |++.+|.++|+.|++.|+.|++..+.... . ..++.+........
T Consensus 5 ~k~~lItGas----------------~~~GIG~aiA~~la~~G~~Vil~~r~~~~-------~--~~~~~~~~~~~~~~- 58 (274)
T PRK08415 5 GKKGLIVGVA----------------NNKSIAYGIAKACFEQGAELAFTYLNEAL-------K--KRVEPIAQELGSDY- 58 (274)
T ss_pred CcEEEEECCC----------------CCCCHHHHHHHHHHHCCCEEEEEecCHHH-------H--HHHHHHHHhcCCce-
Confidence 3999999991 02689999999999999999987653110 0 00110000000010
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
... ..+.|..++.+.+.++.+.++..|++|++|++..
T Consensus 59 ~~~------~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~ 95 (274)
T PRK08415 59 VYE------LDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAP 95 (274)
T ss_pred EEE------ecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCc
Confidence 000 1122345555666666677889999999999753
No 143
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.00041 Score=62.39 Aligned_cols=89 Identities=17% Similarity=0.138 Sum_probs=55.7
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
.++| |+||||+| ||.+|.++|++|+++|+.|+++.+...... ...+-+.. .
T Consensus 4 ~~~~--~~vlItGa------------------sggIG~~~a~~l~~~G~~v~~~~r~~~~~~--------~~~~~~~~-~ 54 (255)
T PRK06057 4 RLAG--RVAVITGG------------------GSGIGLATARRLAAEGATVVVGDIDPEAGK--------AAADEVGG-L 54 (255)
T ss_pred cCCC--CEEEEECC------------------CchHHHHHHHHHHHcCCEEEEEeCCHHHHH--------HHHHHcCC-c
Confidence 3555 99999999 999999999999999999999876421000 00000000 0
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
...+++. +..++.+.+..+.+..+..|++||+|+...+
T Consensus 55 ~~~~D~~-----------~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 92 (255)
T PRK06057 55 FVPTDVT-----------DEDAVNALFDTAAETYGSVDIAFNNAGISPP 92 (255)
T ss_pred EEEeeCC-----------CHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence 0112222 2244444444445556788999999987653
No 144
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.00084 Score=60.24 Aligned_cols=91 Identities=10% Similarity=0.078 Sum_probs=55.6
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccc
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEE 118 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~ 118 (292)
++| |++|||+| |+..|.++|+.|+++|+.|+++.+..... . ...+-+.. ..
T Consensus 3 ~~~--k~~lVtGa------------------s~GIG~aia~~la~~G~~V~~~~r~~~~l------~--~~~~~i~~-~~ 53 (227)
T PRK08862 3 IKS--SIILITSA------------------GSVLGRTISCHFARLGATLILCDQDQSAL------K--DTYEQCSA-LT 53 (227)
T ss_pred CCC--eEEEEECC------------------ccHHHHHHHHHHHHCCCEEEEEcCCHHHH------H--HHHHHHHh-cC
Confidence 444 99999999 88999999999999999999987642210 0 00000000 00
Q ss_pred cceEEeecccccccchhHHHHHHHHHHHHHhhcC-CCceEEEeeccc
Q 022803 119 SAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLG-PCSMFYLAAAVS 164 (292)
Q Consensus 119 ~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~-~~d~~i~aAAVs 164 (292)
..+.... ..+.+..++.+.+.++.+.++ ..|++|++|+..
T Consensus 54 ~~~~~~~------~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~ 94 (227)
T PRK08862 54 DNVYSFQ------LKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSS 94 (227)
T ss_pred CCeEEEE------ccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccC
Confidence 1111000 111233555555655666777 899999999753
No 145
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.00095 Score=58.92 Aligned_cols=90 Identities=21% Similarity=0.250 Sum_probs=55.9
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+++||||+| ||..|.++|++|+++|+.|+++.+..... . ...+.+. ....+.
T Consensus 6 ~~~ilItGa------------------tg~iG~~la~~l~~~g~~V~~~~r~~~~~------~--~~~~~l~--~~~~~~ 57 (237)
T PRK07326 6 GKVALITGG------------------SKGIGFAIAEALLAEGYKVAITARDQKEL------E--EAAAELN--NKGNVL 57 (237)
T ss_pred CCEEEEECC------------------CCcHHHHHHHHHHHCCCEEEEeeCCHHHH------H--HHHHHHh--ccCcEE
Confidence 399999999 99999999999999999999987642100 0 0001000 001222
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
+... .+.+...+.+.+....+.++..|++||+|++.-+
T Consensus 58 ~~~~------D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~ 95 (237)
T PRK07326 58 GLAA------DVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHF 95 (237)
T ss_pred EEEc------cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 2211 1223345555555555567789999999987543
No 146
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.00097 Score=59.84 Aligned_cols=90 Identities=18% Similarity=0.095 Sum_probs=55.9
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+| +|..|.++|+.|+++|+.|+++.+...... .....+.. ....+.
T Consensus 1 ~k~~lItG~------------------s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~--------~~~~~~~~-~~~~~~ 53 (252)
T PRK07677 1 EKVVIITGG------------------SSGMGKAMAKRFAEEGANVVITGRTKEKLE--------EAKLEIEQ-FPGQVL 53 (252)
T ss_pred CCEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHHHh-cCCcEE
Confidence 389999999 999999999999999999988876421100 00000000 001222
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
+... .+.+...+.+.+.++.+.++..|++||+|++.-
T Consensus 54 ~~~~------D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~ 90 (252)
T PRK07677 54 TVQM------DVRNPEDVQKMVEQIDEKFGRIDALINNAAGNF 90 (252)
T ss_pred EEEe------cCCCHHHHHHHHHHHHHHhCCccEEEECCCCCC
Confidence 2111 111334555666666677788999999998753
No 147
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.00079 Score=61.32 Aligned_cols=87 Identities=16% Similarity=0.114 Sum_probs=54.5
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccc-----
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEE----- 118 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~----- 118 (292)
|++|||+| ||.+|.++|+.|+++|+.|+++.+...... ...+-+.....
T Consensus 1 k~vlItGa------------------s~giG~~la~~la~~G~~vv~~~r~~~~~~--------~~~~~~~~~~~~~~~~ 54 (272)
T PRK07832 1 KRCFVTGA------------------ASGIGRATALRLAAQGAELFLTDRDADGLA--------QTVADARALGGTVPEH 54 (272)
T ss_pred CEEEEeCC------------------CCHHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHHHhcCCCcceE
Confidence 57999999 999999999999999999988875321100 00000000000
Q ss_pred cceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 119 SAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 119 ~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
..+++. +..++.+.+.++.+.++..|++||+|++..+.
T Consensus 55 ~~~D~~-----------~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~ 92 (272)
T PRK07832 55 RALDIS-----------DYDAVAAFAADIHAAHGSMDVVMNIAGISAWG 92 (272)
T ss_pred EEeeCC-----------CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 012222 23444444545556678899999999987654
No 148
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=97.31 E-value=0.00089 Score=59.62 Aligned_cols=90 Identities=14% Similarity=0.163 Sum_probs=53.7
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|+||||+| ||.+|.++|+.|+++|+.|+++++...... . ....-+.. ....+..
T Consensus 3 k~ilItGa------------------s~giG~~la~~l~~~g~~v~~~~~~~~~~~-----~--~~~~~~~~-~~~~~~~ 56 (248)
T PRK06947 3 KVVLITGA------------------SRGIGRATAVLAAARGWSVGINYARDAAAA-----E--ETADAVRA-AGGRACV 56 (248)
T ss_pred cEEEEeCC------------------CCcHHHHHHHHHHHCCCEEEEEeCCCHHHH-----H--HHHHHHHh-cCCcEEE
Confidence 78999999 999999999999999999988765421100 0 00000000 0011211
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
+.. .+.+..++.+.+.++.+.++..|++||+|++..
T Consensus 57 ~~~------Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 92 (248)
T PRK06947 57 VAG------DVANEADVIAMFDAVQSAFGRLDALVNNAGIVA 92 (248)
T ss_pred EEe------ccCCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence 111 111224445555445556788999999999864
No 149
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.00029 Score=63.06 Aligned_cols=94 Identities=23% Similarity=0.231 Sum_probs=57.6
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
++.+ |+||||+| +|..|.++|+.|+++|+.|+++.+...... .....+. ..
T Consensus 6 ~~~~--k~ilItGa------------------sg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~--------~~~~~l~-~~ 56 (258)
T PRK06949 6 NLEG--KVALVTGA------------------SSGLGARFAQVLAQAGAKVVLASRRVERLK--------ELRAEIE-AE 56 (258)
T ss_pred CCCC--CEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHHH-hc
Confidence 3544 99999999 999999999999999999999876432100 0000000 00
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
...+.+... .+.+..++.+.+....+.++..|++|++|++...
T Consensus 57 ~~~~~~~~~------D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~ 99 (258)
T PRK06949 57 GGAAHVVSL------DVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTT 99 (258)
T ss_pred CCcEEEEEe------cCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 011222111 1112344555554455567889999999998543
No 150
>PRK06123 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0011 Score=59.01 Aligned_cols=91 Identities=20% Similarity=0.262 Sum_probs=55.2
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|.+|||+| +|..|.++|+.|+++|+.|+++.+...... . ...+.+. .....+.+
T Consensus 3 ~~~lVtG~------------------~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~-----~--~~~~~l~-~~~~~~~~ 56 (248)
T PRK06123 3 KVMIITGA------------------SRGIGAATALLAAERGYAVCLNYLRNRDAA-----E--AVVQAIR-RQGGEALA 56 (248)
T ss_pred CEEEEECC------------------CchHHHHHHHHHHHCCCeEEEecCCCHHHH-----H--HHHHHHH-hCCCcEEE
Confidence 78999999 999999999999999999987764321000 0 0000000 00011111
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
... .+.+...+.+.+.++.+.++..|++||+|++...
T Consensus 57 ~~~------Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~ 93 (248)
T PRK06123 57 VAA------DVADEADVLRLFEAVDRELGRLDALVNNAGILEA 93 (248)
T ss_pred EEe------ccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 111 1123345566665556677889999999998653
No 151
>PRK08264 short chain dehydrogenase; Validated
Probab=97.28 E-value=0.0011 Score=58.67 Aligned_cols=35 Identities=29% Similarity=0.245 Sum_probs=31.9
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCC-eEEEEeeCC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGY-AVIFLYRRG 95 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga-~V~~i~g~~ 95 (292)
+++||||+| ||..|.++|+.|+++|+ .|+.+.+..
T Consensus 6 ~~~vlItGg------------------sg~iG~~la~~l~~~G~~~V~~~~r~~ 41 (238)
T PRK08264 6 GKVVLVTGA------------------NRGIGRAFVEQLLARGAAKVYAAARDP 41 (238)
T ss_pred CCEEEEECC------------------CchHHHHHHHHHHHCCcccEEEEecCh
Confidence 499999999 99999999999999999 998888753
No 152
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.00088 Score=59.50 Aligned_cols=91 Identities=18% Similarity=0.110 Sum_probs=56.7
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
.|++|||+| ||..|.++|+.|+++|+.|+++.++....+ ...+.+. .....+.
T Consensus 6 ~k~vlItG~------------------sg~iG~~la~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~-~~~~~~~ 58 (241)
T PRK07454 6 MPRALITGA------------------SSGIGKATALAFAKAGWDLALVARSQDALE--------ALAAELR-STGVKAA 58 (241)
T ss_pred CCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHHH-hCCCcEE
Confidence 489999999 999999999999999999999887422100 0000000 0011222
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
+.. ..+.++.++.+.+..+.+.++..|++|++|+...+
T Consensus 59 ~~~------~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~ 96 (241)
T PRK07454 59 AYS------IDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYT 96 (241)
T ss_pred EEE------ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCC
Confidence 211 11223455555555556667889999999987543
No 153
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.28 E-value=0.0013 Score=59.87 Aligned_cols=92 Identities=10% Similarity=-0.004 Sum_probs=55.9
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccc
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEE 118 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~ 118 (292)
++| |+||||+|. ||+.+|.++|+.|++.|+.|+++++.....+-. . ...+-+.....
T Consensus 4 l~~--k~vlItGas----------------~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~---~--~~~~~~~~~~~ 60 (260)
T PRK06997 4 LAG--KRILITGLL----------------SNRSIAYGIAKACKREGAELAFTYVGDRFKDRI---T--EFAAEFGSDLV 60 (260)
T ss_pred cCC--cEEEEeCCC----------------CCCcHHHHHHHHHHHCCCeEEEEccchHHHHHH---H--HHHHhcCCcce
Confidence 544 999999971 156899999999999999999875421100000 0 00000000000
Q ss_pred cceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 119 SAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 119 ~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
..+++ .+..++.+.+..+.+.++..|++|++|++.
T Consensus 61 ~~~Dv-----------~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~ 95 (260)
T PRK06997 61 FPCDV-----------ASDEQIDALFASLGQHWDGLDGLVHSIGFA 95 (260)
T ss_pred eeccC-----------CCHHHHHHHHHHHHHHhCCCcEEEEccccC
Confidence 11222 244566666666677789999999999875
No 154
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0011 Score=59.24 Aligned_cols=37 Identities=35% Similarity=0.358 Sum_probs=31.9
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
++++ ++||||+| ||..|.++|+.|+++|+.|+++.++
T Consensus 3 ~~~~--~~ilItGa------------------sg~iG~~la~~l~~~G~~v~i~~~r 39 (254)
T PRK12746 3 NLDG--KVALVTGA------------------SRGIGRAIAMRLANDGALVAIHYGR 39 (254)
T ss_pred CCCC--CEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEcCC
Confidence 3444 99999999 9999999999999999999876543
No 155
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.28 E-value=0.0013 Score=58.14 Aligned_cols=90 Identities=22% Similarity=0.248 Sum_probs=53.9
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEE-eeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFL-YRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i-~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
|++|||+| ||.+|.++|+.|+++|++|+++ .+...... ...+.+.. ....+.
T Consensus 6 ~~ilI~Ga------------------sg~iG~~la~~l~~~g~~v~~~~~r~~~~~~--------~~~~~~~~-~~~~~~ 58 (247)
T PRK05565 6 KVAIVTGA------------------SGGIGRAIAELLAKEGAKVVIAYDINEEAAQ--------ELLEEIKE-EGGDAI 58 (247)
T ss_pred CEEEEeCC------------------CcHHHHHHHHHHHHCCCEEEEEcCCCHHHHH--------HHHHHHHh-cCCeEE
Confidence 89999999 9999999999999999999988 44211000 00010000 011222
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
+... .+.+..++.+.+....+.++..|++||+|+...+
T Consensus 59 ~~~~------D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 96 (247)
T PRK05565 59 AVKA------DVSSEEDVENLVEQIVEKFGKIDILVNNAGISNF 96 (247)
T ss_pred EEEC------CCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCC
Confidence 2211 1112234444444445556789999999998743
No 156
>PRK06484 short chain dehydrogenase; Validated
Probab=97.27 E-value=0.0011 Score=65.92 Aligned_cols=86 Identities=22% Similarity=0.236 Sum_probs=55.8
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCC-ccCCCCCccchhhhhcccccce
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEP-YCSSLPDDAFLECFEVTEESAV 121 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P-~~~~l~~~~~~~~~~~~~~~~i 121 (292)
+|++|||+| |+..|.++|+.|+++|+.|+++.+...... ....+. .++. ...+
T Consensus 5 ~k~~lITGa------------------s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~----~~~~ 58 (520)
T PRK06484 5 SRVVLVTGA------------------AGGIGRAACQRFARAGDQVVVADRNVERARERADSLG----PDHH----ALAM 58 (520)
T ss_pred CeEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----Ccee----EEEe
Confidence 499999999 889999999999999999999876432100 000000 0000 0112
Q ss_pred EEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 122 QGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 122 ~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
++. +..++.+.+..+.+.++..|++|++|++.+
T Consensus 59 D~~-----------~~~~~~~~~~~~~~~~g~iD~li~nag~~~ 91 (520)
T PRK06484 59 DVS-----------DEAQIREGFEQLHREFGRIDVLVNNAGVTD 91 (520)
T ss_pred ccC-----------CHHHHHHHHHHHHHHhCCCCEEEECCCcCC
Confidence 222 234555555555667789999999999854
No 157
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.27 E-value=0.0014 Score=59.49 Aligned_cols=91 Identities=8% Similarity=-0.079 Sum_probs=54.6
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+|++ |+.+|.++|+.|+++|+.|++..+....... . ...+-+ ...+.
T Consensus 7 ~k~~lItGa~~----------------s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~----~--~~~~~~----~~~~~ 60 (256)
T PRK07889 7 GKRILVTGVIT----------------DSSIAFHVARVAQEQGAEVVLTGFGRALRLT----E--RIAKRL----PEPAP 60 (256)
T ss_pred CCEEEEeCCCC----------------cchHHHHHHHHHHHCCCEEEEecCccchhHH----H--HHHHhc----CCCCc
Confidence 39999999821 4689999999999999999887643211000 0 000000 00010
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
.. ...+.+..++.+.+.++.+.++..|++|++|++..
T Consensus 61 ~~------~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~ 97 (256)
T PRK07889 61 VL------ELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAP 97 (256)
T ss_pred EE------eCCCCCHHHHHHHHHHHHHHcCCCcEEEEcccccc
Confidence 00 01122345555556555667889999999999864
No 158
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.26 E-value=0.0015 Score=59.04 Aligned_cols=102 Identities=21% Similarity=0.164 Sum_probs=57.1
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCc--cHHHHHHHHHHHHCCCeEEEEeeCC-CC-CCccCCCCC-ccchhh
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSS--GHRGAASTEHLIKMGYAVIFLYRRG-TC-EPYCSSLPD-DAFLEC 112 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SS--G~~G~~iAe~~~~~Ga~V~~i~g~~-~~-~P~~~~l~~-~~~~~~ 112 (292)
.++| |+||||+| | |.+|.++|+.|+++|+.|++.+... +. .+..+..+. ....+-
T Consensus 3 ~l~~--k~vlVtGa------------------s~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (256)
T PRK12859 3 QLKN--KVAVVTGV------------------SRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEE 62 (256)
T ss_pred CcCC--cEEEEECC------------------CCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHH
Confidence 4555 99999999 6 4899999999999999998875321 00 000000000 000000
Q ss_pred hhcccccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 113 FEVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 113 ~~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
+. .....+..... .+.+..++.+.+....+.++..|++|++|++...
T Consensus 63 ~~-~~g~~~~~~~~------D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~ 109 (256)
T PRK12859 63 LL-KNGVKVSSMEL------DLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTN 109 (256)
T ss_pred HH-hcCCeEEEEEc------CCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC
Confidence 00 00111211111 1223355666665556667888999999998654
No 159
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0017 Score=57.64 Aligned_cols=37 Identities=24% Similarity=0.268 Sum_probs=33.2
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.++| |+||||+| ||..|.++|+.|+++|+.|+++.+.
T Consensus 3 ~l~~--k~vlItG~------------------sggiG~~la~~l~~~g~~V~~~~r~ 39 (239)
T PRK08703 3 TLSD--KTILVTGA------------------SQGLGEQVAKAYAAAGATVILVARH 39 (239)
T ss_pred CCCC--CEEEEECC------------------CCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 4555 99999999 9999999999999999999998864
No 160
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.25 E-value=0.0011 Score=59.09 Aligned_cols=90 Identities=18% Similarity=0.182 Sum_probs=56.3
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|++|||+| ||..|.++|+.++++|+.|+++.+...... .....+. .....+..
T Consensus 1 k~~lItG~------------------sg~iG~~la~~l~~~G~~v~~~~r~~~~~~--------~~~~~l~-~~~~~~~~ 53 (254)
T TIGR02415 1 KVALVTGG------------------AQGIGKGIAERLAKDGFAVAVADLNEETAK--------ETAKEIN-QAGGKAVA 53 (254)
T ss_pred CEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHHH-hcCCeEEE
Confidence 57999999 999999999999999999999886421100 0000000 00111221
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
... .+.+...+.+.+..+.+.++..|++||+|++...
T Consensus 54 ~~~------Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~ 90 (254)
T TIGR02415 54 YKL------DVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPI 90 (254)
T ss_pred EEc------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence 111 1223355666666666677889999999998643
No 161
>PRK05855 short chain dehydrogenase; Validated
Probab=97.25 E-value=0.0018 Score=64.45 Aligned_cols=114 Identities=10% Similarity=0.061 Sum_probs=70.5
Q ss_pred CCCHHHHHHHHHHHHhcC------------------CCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHH
Q 022803 19 LNDRAAISQKLKEFIALN------------------SSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEH 80 (292)
Q Consensus 19 ~~~~~~i~~~~~~~l~~~------------------~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~ 80 (292)
...|+++...+.+|+... ... .++++|||+| ||.+|.++|+.
T Consensus 275 ~e~p~~~~~~i~~fl~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~lv~G~------------------s~giG~~~a~~ 334 (582)
T PRK05855 275 MSHPQVLAAAVAEFVDAVEGGPPARALLRARVGRPRGPF--SGKLVVVTGA------------------GSGIGRETALA 334 (582)
T ss_pred hhChhHHHHHHHHHHHhccCCCchHHHHHhhhccccccC--CCCEEEEECC------------------cCHHHHHHHHH
Confidence 446777777777777531 112 3478889888 99999999999
Q ss_pred HHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEe
Q 022803 81 LIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLA 160 (292)
Q Consensus 81 ~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~a 160 (292)
|+++|+.|+++.+...... .....+.. ....+.+.. ..|.+..++.+.+.++.+.++..|++|++
T Consensus 335 l~~~G~~v~~~~r~~~~~~--------~~~~~~~~-~~~~~~~~~------~Dv~~~~~~~~~~~~~~~~~g~id~lv~~ 399 (582)
T PRK05855 335 FAREGAEVVASDIDEAAAE--------RTAELIRA-AGAVAHAYR------VDVSDADAMEAFAEWVRAEHGVPDIVVNN 399 (582)
T ss_pred HHHCCCEEEEEeCCHHHHH--------HHHHHHHh-cCCeEEEEE------cCCCCHHHHHHHHHHHHHhcCCCcEEEEC
Confidence 9999999999886421100 00000000 001121111 12224456666666666677889999999
Q ss_pred ecccCCc
Q 022803 161 AAVSDFY 167 (292)
Q Consensus 161 AAVsDf~ 167 (292)
|++..+.
T Consensus 400 Ag~~~~~ 406 (582)
T PRK05855 400 AGIGMAG 406 (582)
T ss_pred CccCCCC
Confidence 9997543
No 162
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=97.23 E-value=0.0011 Score=62.98 Aligned_cols=43 Identities=19% Similarity=0.078 Sum_probs=36.1
Q ss_pred HHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 32 FIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 32 ~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|..+..|++ |+||||+| ||-.|..|+++|+++|++|+.+.+.
T Consensus 6 ~~~~~~~~~~--~~vlVtGa------------------tGfiG~~lv~~L~~~g~~V~~~d~~ 48 (348)
T PRK15181 6 ELRTKLVLAP--KRWLITGV------------------AGFIGSGLLEELLFLNQTVIGLDNF 48 (348)
T ss_pred hhhhcccccC--CEEEEECC------------------ccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4433345655 99999999 9999999999999999999988764
No 163
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=97.21 E-value=0.00077 Score=62.49 Aligned_cols=36 Identities=33% Similarity=0.482 Sum_probs=32.6
Q ss_pred CCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 41 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 41 ~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|++|+||||+| ||..|..+++.++++|++|+.+.+.
T Consensus 2 ~~~~~ilVtGa------------------tGfIG~~l~~~L~~~g~~V~~~~r~ 37 (322)
T PLN02662 2 GEGKVVCVTGA------------------SGYIASWLVKLLLQRGYTVKATVRD 37 (322)
T ss_pred CCCCEEEEECC------------------hHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 35699999999 9999999999999999999887764
No 164
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=97.21 E-value=0.0009 Score=62.45 Aligned_cols=35 Identities=29% Similarity=0.377 Sum_probs=32.0
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.+|+||||+| ||..|.++++.|+++|++|+.+.+.
T Consensus 4 ~~~~vlVTGa------------------tG~iG~~l~~~L~~~g~~V~~~~r~ 38 (322)
T PLN02986 4 GGKLVCVTGA------------------SGYIASWIVKLLLLRGYTVKATVRD 38 (322)
T ss_pred CCCEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4599999999 9999999999999999999877764
No 165
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0024 Score=65.41 Aligned_cols=90 Identities=14% Similarity=0.152 Sum_probs=58.0
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|++|||+| ||.+|.++|+.|+++|+.|+++.+..... . ...+-+. .....+.
T Consensus 371 ~k~vlItGa------------------s~giG~~la~~l~~~G~~V~~~~r~~~~~------~--~~~~~~~-~~~~~~~ 423 (657)
T PRK07201 371 GKVVLITGA------------------SSGIGRATAIKVAEAGATVFLVARNGEAL------D--ELVAEIR-AKGGTAH 423 (657)
T ss_pred CCEEEEeCC------------------CCHHHHHHHHHHHHCCCEEEEEECCHHHH------H--HHHHHHH-hcCCcEE
Confidence 489999999 99999999999999999999988642110 0 0000000 0011222
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
+.. ..+.+..++.+.+.++.+.++..|++|++|++..
T Consensus 424 ~~~------~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~ 460 (657)
T PRK07201 424 AYT------CDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSI 460 (657)
T ss_pred EEE------ecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 211 1222445666666666677889999999999863
No 166
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0013 Score=59.64 Aligned_cols=91 Identities=10% Similarity=0.058 Sum_probs=55.0
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|+||||+| ||..|.++|+.|+++|+.|+++.+..... . .....+. .....+.+
T Consensus 1 ~~vlVtGa------------------sggIG~~la~~l~~~g~~V~~~~r~~~~~------~--~~~~~l~-~~~~~~~~ 53 (270)
T PRK05650 1 NRVMITGA------------------ASGLGRAIALRWAREGWRLALADVNEEGG------E--ETLKLLR-EAGGDGFY 53 (270)
T ss_pred CEEEEecC------------------CChHHHHHHHHHHHCCCEEEEEeCCHHHH------H--HHHHHHH-hcCCceEE
Confidence 57999999 99999999999999999999887642110 0 0000000 00111211
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
... .+.+..++.+.+..+.+.++..|++||+|++....
T Consensus 54 ~~~------D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~ 91 (270)
T PRK05650 54 QRC------DVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGG 91 (270)
T ss_pred EEc------cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 111 11133455555444455567899999999986543
No 167
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0013 Score=59.11 Aligned_cols=91 Identities=13% Similarity=0.140 Sum_probs=57.0
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
++||||+| ||..|.++|+.|+++|+.|+++.+...... ...+.+.. .+..+.+
T Consensus 2 ~~vlVtGa------------------sg~iG~~la~~l~~~g~~Vi~~~r~~~~~~--------~~~~~l~~-~~~~~~~ 54 (263)
T PRK06181 2 KVVIITGA------------------SEGIGRALAVRLARAGAQLVLAARNETRLA--------SLAQELAD-HGGEALV 54 (263)
T ss_pred CEEEEecC------------------CcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--------HHHHHHHh-cCCcEEE
Confidence 78999999 999999999999999999999986421100 00000000 0112222
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
... .+.+...+.+.+..+.+.++..|++||+|++....
T Consensus 55 ~~~------Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 92 (263)
T PRK06181 55 VPT------DVSDAEACERLIEAAVARFGGIDILVNNAGITMWS 92 (263)
T ss_pred EEc------cCCCHHHHHHHHHHHHHHcCCCCEEEECCCccccc
Confidence 111 12234555565555556678889999999986543
No 168
>PLN00198 anthocyanidin reductase; Provisional
Probab=97.20 E-value=0.0016 Score=61.19 Aligned_cols=34 Identities=32% Similarity=0.550 Sum_probs=31.2
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+++||||+| +|..|..+|++++++|++|+.+.+.
T Consensus 9 ~~~vlItG~------------------~GfIG~~l~~~L~~~g~~V~~~~r~ 42 (338)
T PLN00198 9 KKTACVIGG------------------TGFLASLLIKLLLQKGYAVNTTVRD 42 (338)
T ss_pred CCeEEEECC------------------chHHHHHHHHHHHHCCCEEEEEECC
Confidence 499999999 9999999999999999999877654
No 169
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=97.19 E-value=0.0017 Score=57.26 Aligned_cols=91 Identities=22% Similarity=0.220 Sum_probs=54.5
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|.+|||+| ||..|.++|+.|+++|+.|+.+.++.. +.. . ...+.... ....+.+
T Consensus 1 k~~lItG~------------------sg~iG~~la~~l~~~G~~v~~~~r~~~--~~~---~--~~~~~~~~-~~~~~~~ 54 (242)
T TIGR01829 1 RIALVTGG------------------MGGIGTAICQRLAKDGYRVAANCGPNE--ERA---E--AWLQEQGA-LGFDFRV 54 (242)
T ss_pred CEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCCCH--HHH---H--HHHHHHHh-hCCceEE
Confidence 67999999 999999999999999999998887321 100 0 00000000 0012222
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
... .+.+..++.+.+....+.++..|++||+|++...
T Consensus 55 ~~~------D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 91 (242)
T TIGR01829 55 VEG------DVSSFESCKAAVAKVEAELGPIDVLVNNAGITRD 91 (242)
T ss_pred EEe------cCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC
Confidence 111 1112244445554445567889999999998653
No 170
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0017 Score=58.67 Aligned_cols=91 Identities=15% Similarity=0.169 Sum_probs=54.3
Q ss_pred CceEEEecCCcccccCCCceeeeecCCcc-HHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcc-cccc
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSG-HRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVT-EESA 120 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG-~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~-~~~~ 120 (292)
+|++|||+| +| ..|.++|+.|+++|+.|+++.+.... +. ...+-+... ....
T Consensus 17 ~k~vlItG~------------------sg~gIG~~ia~~l~~~G~~V~~~~~~~~~------~~--~~~~~~~~~~~~~~ 70 (262)
T PRK07831 17 GKVVLVTAA------------------AGTGIGSATARRALEEGARVVISDIHERR------LG--ETADELAAELGLGR 70 (262)
T ss_pred CCEEEEECC------------------CcccHHHHHHHHHHHcCCEEEEEeCCHHH------HH--HHHHHHHHhcCCce
Confidence 499999999 77 69999999999999999887643110 00 000000000 0012
Q ss_pred eEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 121 VQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 121 i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
+..... .+.+..++.+.+..+.+.++..|++||+|++..
T Consensus 71 ~~~~~~------Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~ 109 (262)
T PRK07831 71 VEAVVC------DVTSEAQVDALIDAAVERLGRLDVLVNNAGLGG 109 (262)
T ss_pred EEEEEc------cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 222111 112334555555555666788999999999754
No 171
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.16 E-value=0.00088 Score=62.99 Aligned_cols=95 Identities=19% Similarity=0.180 Sum_probs=61.9
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccc-hhhhhcc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAF-LECFEVT 116 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~-~~~~~~~ 116 (292)
.+.| |+||||+- |...|.++|.+++.+|+.++++.+.... +. .. -++...-
T Consensus 9 ~~~~--kvVvITGA------------------SsGIG~~lA~~la~~G~~l~lvar~~rr------l~--~v~~~l~~~~ 60 (282)
T KOG1205|consen 9 RLAG--KVVLITGA------------------SSGIGEALAYELAKRGAKLVLVARRARR------LE--RVAEELRKLG 60 (282)
T ss_pred HhCC--CEEEEeCC------------------CcHHHHHHHHHHHhCCCceEEeehhhhh------HH--HHHHHHHHhC
Confidence 3544 99999988 7779999999999999999999986431 11 00 0000000
Q ss_pred cccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 117 EESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 117 ~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
....+.+.+- .|.|-.+..+++......++..|++|.+|..+=.
T Consensus 61 ~~~~v~~~~~------Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~ 104 (282)
T KOG1205|consen 61 SLEKVLVLQL------DVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLV 104 (282)
T ss_pred CcCccEEEeC------ccCCHHHHHHHHHHHHHhcCCCCEEEecCccccc
Confidence 0011211111 1223366777777777889999999999999873
No 172
>PRK07775 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0016 Score=59.57 Aligned_cols=91 Identities=20% Similarity=0.213 Sum_probs=56.7
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|.+|||+| +|..|.++|+.|+.+|+.|+++.+..... . ...+-+.. ....+.
T Consensus 10 ~~~vlVtGa------------------~g~iG~~la~~L~~~G~~V~~~~r~~~~~------~--~~~~~~~~-~~~~~~ 62 (274)
T PRK07775 10 RRPALVAGA------------------SSGIGAATAIELAAAGFPVALGARRVEKC------E--ELVDKIRA-DGGEAV 62 (274)
T ss_pred CCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCCHHHH------H--HHHHHHHh-cCCeEE
Confidence 389999999 99999999999999999998887642110 0 00000000 001121
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
+.. ..+.+..++.+.+.+....++..|++||+|++.+.
T Consensus 63 ~~~------~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~ 100 (274)
T PRK07775 63 AFP------LDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYF 100 (274)
T ss_pred EEE------CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCC
Confidence 111 12224456666555555567789999999998764
No 173
>PRK07069 short chain dehydrogenase; Validated
Probab=97.13 E-value=0.002 Score=57.30 Aligned_cols=92 Identities=17% Similarity=0.209 Sum_probs=54.6
Q ss_pred eEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcc-cccceEE
Q 022803 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVT-EESAVQG 123 (292)
Q Consensus 45 ~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~-~~~~i~v 123 (292)
+||||+| +|.+|.++|+.|+++|++|+++.+..... . . ...+.+... ....+..
T Consensus 1 ~ilVtG~------------------~~~iG~~~a~~l~~~G~~v~~~~r~~~~~--~---~--~~~~~~~~~~~~~~~~~ 55 (251)
T PRK07069 1 RAFITGA------------------AGGLGRAIARRMAEQGAKVFLTDINDAAG--L---D--AFAAEINAAHGEGVAFA 55 (251)
T ss_pred CEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCCcchH--H---H--HHHHHHHhcCCCceEEE
Confidence 4899999 99999999999999999999988642110 0 0 000000000 0000110
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
.. ..+.+...+.+.+.++.+.++..|++||+|++....
T Consensus 56 ~~------~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 93 (251)
T PRK07069 56 AV------QDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFG 93 (251)
T ss_pred EE------eecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCC
Confidence 00 011122455555555566688899999999987654
No 174
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=97.11 E-value=0.0023 Score=56.56 Aligned_cols=91 Identities=21% Similarity=0.278 Sum_probs=56.0
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|+||||+| ||..|.++|+.|+++|+.|+++.+... +.. . ....... .....+.+
T Consensus 3 k~vlItG~------------------s~~iG~~la~~l~~~g~~vi~~~r~~~--~~~---~--~~~~~~~-~~~~~~~~ 56 (245)
T PRK12824 3 KIALVTGA------------------KRGIGSAIARELLNDGYRVIATYFSGN--DCA---K--DWFEEYG-FTEDQVRL 56 (245)
T ss_pred CEEEEeCC------------------CchHHHHHHHHHHHcCCEEEEEeCCcH--HHH---H--HHHHHhh-ccCCeEEE
Confidence 78999999 999999999999999999999886522 100 0 0000000 00011222
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
... .+.+...+.+.+..+.+.++..|++||+|+..+.
T Consensus 57 ~~~------D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~ 93 (245)
T PRK12824 57 KEL------DVTDTEECAEALAEIEEEEGPVDILVNNAGITRD 93 (245)
T ss_pred EEc------CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 211 1113344555555555667889999999998754
No 175
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=97.11 E-value=0.0015 Score=61.42 Aligned_cols=38 Identities=34% Similarity=0.475 Sum_probs=33.7
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
++++ |+||||+| ||..|.+++++++.+|++|+.+.+..
T Consensus 3 ~~~~--~~vlVTGa------------------tGfiG~~l~~~L~~~G~~V~~~~r~~ 40 (340)
T PLN02653 3 DPPR--KVALITGI------------------TGQDGSYLTEFLLSKGYEVHGIIRRS 40 (340)
T ss_pred CCCC--CEEEEECC------------------CCccHHHHHHHHHHCCCEEEEEeccc
Confidence 4544 99999999 99999999999999999999987653
No 176
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=97.09 E-value=0.0023 Score=56.55 Aligned_cols=89 Identities=18% Similarity=0.195 Sum_probs=53.8
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|+||||+| ||..|.++++.|+++|++|+++.+.... +. . .....+. .....+.+
T Consensus 2 ~~~lItGa------------------~g~iG~~l~~~l~~~g~~v~~~~~~~~~-~~----~--~~~~~~~-~~~~~~~~ 55 (247)
T PRK09730 2 AIALVTGG------------------SRGIGRATALLLAQEGYTVAVNYQQNLH-AA----Q--EVVNLIT-QAGGKAFV 55 (247)
T ss_pred CEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCCChH-HH----H--HHHHHHH-hCCCeEEE
Confidence 67999999 9999999999999999999886543211 00 0 0000000 00011221
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
.. ..+.|..++.+.+..+.+.++..|++||+|++.
T Consensus 56 ~~------~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~ 90 (247)
T PRK09730 56 LQ------ADISDENQVVAMFTAIDQHDEPLAALVNNAGIL 90 (247)
T ss_pred EE------ccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 11 112233555555555556678899999999874
No 177
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.09 E-value=0.002 Score=60.53 Aligned_cols=88 Identities=20% Similarity=0.138 Sum_probs=53.4
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCC-CeEEEEeeCCCC-CCccCCCCCccchhhhhcccccc
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG-YAVIFLYRRGTC-EPYCSSLPDDAFLECFEVTEESA 120 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~G-a~V~~i~g~~~~-~P~~~~l~~~~~~~~~~~~~~~~ 120 (292)
+|++|||+| ||.+|.++|+.|+++| +.|+++.+.... ......+. . ....
T Consensus 3 ~k~vlITGa------------------s~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~---------~-~~~~ 54 (314)
T TIGR01289 3 KPTVIITGA------------------SSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG---------M-PKDS 54 (314)
T ss_pred CCEEEEECC------------------CChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc---------C-CCCe
Confidence 389999999 8999999999999999 999988764210 00000000 0 0011
Q ss_pred eEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 121 VQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 121 i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
+.+.. ..+.++.++.+.+.+..+.++..|++|++|++.
T Consensus 55 ~~~~~------~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~ 92 (314)
T TIGR01289 55 YTIMH------LDLGSLDSVRQFVQQFRESGRPLDALVCNAAVY 92 (314)
T ss_pred EEEEE------cCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcc
Confidence 11111 112233444555544455567899999999974
No 178
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=97.08 E-value=0.0015 Score=61.69 Aligned_cols=34 Identities=35% Similarity=0.538 Sum_probs=31.4
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
|+||||+| ||-.|.++++.|+++|++|+.+.+..
T Consensus 1 ~~vlVTGa------------------tGfIG~~l~~~L~~~G~~V~~~~r~~ 34 (343)
T TIGR01472 1 KIALITGI------------------TGQDGSYLAEFLLEKGYEVHGLIRRS 34 (343)
T ss_pred CeEEEEcC------------------CCcHHHHHHHHHHHCCCEEEEEecCC
Confidence 68999999 99999999999999999999988653
No 179
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0019 Score=56.98 Aligned_cols=33 Identities=24% Similarity=0.328 Sum_probs=31.1
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|+||||+| ||..|.++|+.|+++|+.|+++.+.
T Consensus 2 k~vlItG~------------------sg~iG~~la~~l~~~G~~V~~~~r~ 34 (225)
T PRK08177 2 RTALIIGA------------------SRGLGLGLVDRLLERGWQVTATVRG 34 (225)
T ss_pred CEEEEeCC------------------CchHHHHHHHHHHhCCCEEEEEeCC
Confidence 78999999 9999999999999999999999875
No 180
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.05 E-value=0.003 Score=56.01 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=31.2
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
++++|||+| +|.+|.++|+.++++|+.|+++.+.
T Consensus 5 ~~~~lItG~------------------~g~iG~~~a~~l~~~G~~vi~~~r~ 38 (253)
T PRK08217 5 DKVIVITGG------------------AQGLGRAMAEYLAQKGAKLALIDLN 38 (253)
T ss_pred CCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 399999999 9999999999999999999888764
No 181
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.04 E-value=0.00081 Score=59.41 Aligned_cols=34 Identities=21% Similarity=0.120 Sum_probs=31.8
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|+||||+| ||..|.++|+.|+++|+.|+++.+.
T Consensus 5 ~~~vlItGa------------------~g~iG~~~a~~l~~~G~~V~~~~r~ 38 (238)
T PRK05786 5 GKKVAIIGV------------------SEGLGYAVAYFALKEGAQVCINSRN 38 (238)
T ss_pred CcEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 399999999 9999999999999999999998875
No 182
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=97.04 E-value=0.0029 Score=59.94 Aligned_cols=33 Identities=21% Similarity=0.238 Sum_probs=31.2
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|+||||+| +|-.|.++|+.|+++|++|+.+.+.
T Consensus 5 k~ilItGa------------------tG~IG~~l~~~L~~~G~~V~~~~r~ 37 (349)
T TIGR02622 5 KKVLVTGH------------------TGFKGSWLSLWLLELGAEVYGYSLD 37 (349)
T ss_pred CEEEEECC------------------CChhHHHHHHHHHHCCCEEEEEeCC
Confidence 99999999 9999999999999999999988764
No 183
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=97.03 E-value=0.0041 Score=51.07 Aligned_cols=94 Identities=20% Similarity=0.176 Sum_probs=52.3
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCe-EEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA-VIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~-V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
|+++||+| ||..|.++|+.++++|+. |+++.+ ....+. ... ...+.+. .....+.
T Consensus 1 ~~~li~Ga------------------~~~iG~~~~~~l~~~g~~~v~~~~r-~~~~~~--~~~--~~~~~~~-~~~~~~~ 56 (180)
T smart00822 1 GTYLITGG------------------LGGLGLELARWLAERGARHLVLLSR-SGPDAP--GAA--ELLAELE-ALGAEVT 56 (180)
T ss_pred CEEEEEcC------------------CChHHHHHHHHHHHhhCCeEEEEeC-CCCCCc--cHH--HHHHHHH-hcCCeEE
Confidence 57899998 999999999999999985 555544 221110 000 0001010 0011222
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
+... .+.+..++.+.+......++..|.+||+|++.+..
T Consensus 57 ~~~~------D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~ 95 (180)
T smart00822 57 VVAC------DVADRAALAAALAAIPARLGPLRGVIHAAGVLDDG 95 (180)
T ss_pred EEEC------CCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCcc
Confidence 2211 11123445555444455577889999999987654
No 184
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.01 E-value=0.0027 Score=66.30 Aligned_cols=94 Identities=16% Similarity=0.128 Sum_probs=58.7
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcc-
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVT- 116 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~- 116 (292)
++.| |+||||+| +|..|.++|+.|+++|+.|+++.+...... .....+...
T Consensus 411 ~l~g--kvvLVTGa------------------sggIG~aiA~~La~~Ga~Vvi~~r~~~~~~--------~~~~~l~~~~ 462 (676)
T TIGR02632 411 TLAR--RVAFVTGG------------------AGGIGRETARRLAAEGAHVVLADLNLEAAE--------AVAAEINGQF 462 (676)
T ss_pred CCCC--CEEEEeCC------------------CcHHHHHHHHHHHhCCCEEEEEeCCHHHHH--------HHHHHHHhhc
Confidence 4544 99999999 999999999999999999999886422100 000000000
Q ss_pred cccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 117 EESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 117 ~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
....+.... ..+.+..++.+++.++...++..|++||+|+++.
T Consensus 463 ~~~~~~~v~------~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~ 505 (676)
T TIGR02632 463 GAGRAVALK------MDVTDEQAVKAAFADVALAYGGVDIVVNNAGIAT 505 (676)
T ss_pred CCCcEEEEE------CCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCC
Confidence 000111111 1122345566666666677889999999999764
No 185
>PLN02778 3,5-epimerase/4-reductase
Probab=97.00 E-value=0.0023 Score=59.89 Aligned_cols=32 Identities=9% Similarity=0.014 Sum_probs=29.2
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEE
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFL 91 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i 91 (292)
..++||||+| ||-.|..++++|+++|++|++.
T Consensus 8 ~~~kiLVtG~------------------tGfiG~~l~~~L~~~g~~V~~~ 39 (298)
T PLN02778 8 ATLKFLIYGK------------------TGWIGGLLGKLCQEQGIDFHYG 39 (298)
T ss_pred CCCeEEEECC------------------CCHHHHHHHHHHHhCCCEEEEe
Confidence 3489999999 9999999999999999999864
No 186
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.0023 Score=56.94 Aligned_cols=33 Identities=9% Similarity=0.123 Sum_probs=31.0
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|+||||+| ||..|.++|+.|+++|+.|+++.+.
T Consensus 2 ~~vlItGa------------------s~giG~~~a~~l~~~G~~Vi~~~r~ 34 (243)
T PRK07102 2 KKILIIGA------------------TSDIARACARRYAAAGARLYLAARD 34 (243)
T ss_pred cEEEEEcC------------------CcHHHHHHHHHHHhcCCEEEEEeCC
Confidence 78999999 9999999999999999999999864
No 187
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=96.99 E-value=0.0036 Score=59.26 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=29.6
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEE
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIF 90 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~ 90 (292)
+|.| |++|||+|.+ |...|.++|+.|+++||.|++
T Consensus 6 ~l~g--k~alITGa~~----------------s~GIG~a~A~~la~~Ga~Vv~ 40 (303)
T PLN02730 6 DLRG--KRAFIAGVAD----------------DNGYGWAIAKALAAAGAEILV 40 (303)
T ss_pred CCCC--CEEEEeCCCC----------------CCcHHHHHHHHHHHCCCEEEE
Confidence 4655 9999999921 356899999999999999998
No 188
>PRK05599 hypothetical protein; Provisional
Probab=96.98 E-value=0.003 Score=56.85 Aligned_cols=89 Identities=12% Similarity=0.098 Sum_probs=52.8
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|.+|||+| |+.+|.++|+.|+ .|+.|+++.+..... . ...+-+.......+.+
T Consensus 1 ~~vlItGa------------------s~GIG~aia~~l~-~g~~Vil~~r~~~~~------~--~~~~~l~~~~~~~~~~ 53 (246)
T PRK05599 1 MSILILGG------------------TSDIAGEIATLLC-HGEDVVLAARRPEAA------Q--GLASDLRQRGATSVHV 53 (246)
T ss_pred CeEEEEeC------------------ccHHHHHHHHHHh-CCCEEEEEeCCHHHH------H--HHHHHHHhccCCceEE
Confidence 46899999 8899999999998 699999987642100 0 0000010000011211
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
... .+.|...+.+.+.+..+.++..|++|++|++..
T Consensus 54 ~~~------Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~ 89 (246)
T PRK05599 54 LSF------DAQDLDTHRELVKQTQELAGEISLAVVAFGILG 89 (246)
T ss_pred EEc------ccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCC
Confidence 111 122334555555555666788999999998854
No 189
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.96 E-value=0.0033 Score=61.75 Aligned_cols=78 Identities=18% Similarity=0.072 Sum_probs=47.1
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhh-cc-cccceEEeecccccccchhHHHHHHHHHHHH
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFE-VT-EESAVQGSSRRPSVEASLYNYIRMLQMIAVS 147 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~-~~-~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~ 147 (292)
+|.+|.++|+.|+++|+.|+++.++.... ...+... .. ....+++. +..++.+.+...
T Consensus 219 sggIG~~la~~l~~~Ga~vi~~~~~~~~~---------~l~~~~~~~~~~~~~~Dv~-----------~~~~~~~~~~~~ 278 (450)
T PRK08261 219 ARGIGAAIAEVLARDGAHVVCLDVPAAGE---------ALAAVANRVGGTALALDIT-----------APDAPARIAEHL 278 (450)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCccHH---------HHHHHHHHcCCeEEEEeCC-----------CHHHHHHHHHHH
Confidence 88899999999999999999987642110 0000000 00 00112332 234455555444
Q ss_pred HhhcCCCceEEEeecccCCc
Q 022803 148 SRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 148 l~~~~~~d~~i~aAAVsDf~ 167 (292)
.+.++..|++||+|++.+..
T Consensus 279 ~~~~g~id~vi~~AG~~~~~ 298 (450)
T PRK08261 279 AERHGGLDIVVHNAGITRDK 298 (450)
T ss_pred HHhCCCCCEEEECCCcCCCC
Confidence 55567889999999987643
No 190
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0042 Score=55.62 Aligned_cols=33 Identities=33% Similarity=0.324 Sum_probs=30.2
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEee
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
+|++|||+| +|..|.++|+.|++.|+.|++..+
T Consensus 4 ~k~~lItGa------------------s~gIG~~ia~~l~~~G~~v~~~~~ 36 (252)
T PRK12747 4 GKVALVTGA------------------SRGIGRAIAKRLANDGALVAIHYG 36 (252)
T ss_pred CCEEEEeCC------------------CChHHHHHHHHHHHCCCeEEEEcC
Confidence 399999999 899999999999999999988754
No 191
>PRK06924 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0061 Score=54.33 Aligned_cols=33 Identities=30% Similarity=0.360 Sum_probs=30.8
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|+||||+| ||..|.+||++|+++|++|+++.+.
T Consensus 2 k~vlItGa------------------sggiG~~ia~~l~~~g~~V~~~~r~ 34 (251)
T PRK06924 2 RYVIITGT------------------SQGLGEAIANQLLEKGTHVISISRT 34 (251)
T ss_pred cEEEEecC------------------CchHHHHHHHHHHhcCCEEEEEeCC
Confidence 68999999 9999999999999999999998864
No 192
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=96.92 E-value=0.0021 Score=61.59 Aligned_cols=86 Identities=22% Similarity=0.249 Sum_probs=56.0
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCC---ccCCCCCccchhhhhccccc
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEP---YCSSLPDDAFLECFEVTEES 119 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P---~~~~l~~~~~~~~~~~~~~~ 119 (292)
+++|+||++ ||-.|..|.+.++.|||.|.=..+.....- +.+.|+. ...
T Consensus 6 ~~~VcVTGA------------------sGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~----------a~~ 57 (327)
T KOG1502|consen 6 GKKVCVTGA------------------SGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEG----------AKE 57 (327)
T ss_pred CcEEEEeCC------------------chHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhccc----------Ccc
Confidence 499999999 999999999999999999977666533210 0111220 011
Q ss_pred ceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCcCC
Q 022803 120 AVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFYVP 169 (292)
Q Consensus 120 ~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~v~ 169 (292)
...+.. ..+.||....++ +..||.++|.|++-||...
T Consensus 58 ~l~l~~------aDL~d~~sf~~a-------i~gcdgVfH~Asp~~~~~~ 94 (327)
T KOG1502|consen 58 RLKLFK------ADLLDEGSFDKA-------IDGCDGVFHTASPVDFDLE 94 (327)
T ss_pred cceEEe------ccccccchHHHH-------HhCCCEEEEeCccCCCCCC
Confidence 232221 223344444333 4579999999999999863
No 193
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=96.92 E-value=0.0043 Score=55.31 Aligned_cols=90 Identities=21% Similarity=0.223 Sum_probs=56.5
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhh-----ccc
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFE-----VTE 117 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~-----~~~ 117 (292)
+|+||||+| |+.+|.++|+.|+++|+.|+++.+..... .. . ...+... ...
T Consensus 5 ~~~ilITGa------------------s~GiG~aia~~l~~~G~~v~~~~~~~~~~-~~---~--~~~~~~~~~~~~~~~ 60 (251)
T COG1028 5 GKVALVTGA------------------SSGIGRAIARALAREGARVVVAARRSEEE-AA---E--ALAAAIKEAGGGRAA 60 (251)
T ss_pred CCEEEEeCC------------------CCHHHHHHHHHHHHCCCeEEEEcCCCchh-hH---H--HHHHHHHhcCCCcEE
Confidence 499999999 88999999999999999999998864320 00 0 0000000 000
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
...+++.. ........+......++..|++|++|++.-+
T Consensus 61 ~~~~Dvs~----------~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~ 99 (251)
T COG1028 61 AVAADVSD----------DEESVEALVAAAEEEFGRIDILVNNAGIAGP 99 (251)
T ss_pred EEEecCCC----------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 01122221 0244444555556668889999999999765
No 194
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=96.91 E-value=0.0013 Score=62.31 Aligned_cols=35 Identities=29% Similarity=0.419 Sum_probs=31.7
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.+++||||+| +|..|.++|++|+++|++|+.+.+.
T Consensus 9 ~~~~vLVtG~------------------~GfIG~~l~~~L~~~G~~V~~~~r~ 43 (353)
T PLN02896 9 ATGTYCVTGA------------------TGYIGSWLVKLLLQRGYTVHATLRD 43 (353)
T ss_pred CCCEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3499999999 9999999999999999999987654
No 195
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=96.91 E-value=0.0035 Score=56.87 Aligned_cols=33 Identities=30% Similarity=0.469 Sum_probs=30.1
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.+|||+| ||..|.++|+.|+++|+.|+++.++
T Consensus 2 ~~~lITGa------------------s~gIG~~~a~~l~~~G~~V~~~~~~ 34 (267)
T TIGR02685 2 PAAVVTGA------------------AKRIGSSIAVALHQEGYRVVLHYHR 34 (267)
T ss_pred CEEEEeCC------------------CCcHHHHHHHHHHhCCCeEEEEcCC
Confidence 68999999 8999999999999999999988654
No 196
>PLN02650 dihydroflavonol-4-reductase
Probab=96.90 E-value=0.0024 Score=60.43 Aligned_cols=34 Identities=32% Similarity=0.495 Sum_probs=31.4
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|+||||+| ||..|.++++.|+++|++|+.+.+.
T Consensus 5 ~k~iLVTGa------------------tGfIGs~l~~~L~~~G~~V~~~~r~ 38 (351)
T PLN02650 5 KETVCVTGA------------------SGFIGSWLVMRLLERGYTVRATVRD 38 (351)
T ss_pred CCEEEEeCC------------------cHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 489999999 9999999999999999999987764
No 197
>PRK12742 oxidoreductase; Provisional
Probab=96.88 E-value=0.0059 Score=53.85 Aligned_cols=35 Identities=31% Similarity=0.393 Sum_probs=31.5
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEee
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
+++ |+||||+| +|..|.++|+.|+++|++|+++.+
T Consensus 4 ~~~--k~vlItGa------------------sggIG~~~a~~l~~~G~~v~~~~~ 38 (237)
T PRK12742 4 FTG--KKVLVLGG------------------SRGIGAAIVRRFVTDGANVRFTYA 38 (237)
T ss_pred CCC--CEEEEECC------------------CChHHHHHHHHHHHCCCEEEEecC
Confidence 444 99999999 999999999999999999988755
No 198
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=96.87 E-value=0.0027 Score=59.25 Aligned_cols=34 Identities=29% Similarity=0.393 Sum_probs=31.1
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|+||||+| +|..|.++++.|+++|++|+.+.+.
T Consensus 5 ~k~vlVtG~------------------~G~IG~~l~~~L~~~G~~V~~~~r~ 38 (325)
T PLN02989 5 GKVVCVTGA------------------SGYIASWIVKLLLFRGYTINATVRD 38 (325)
T ss_pred CCEEEEECC------------------chHHHHHHHHHHHHCCCEEEEEEcC
Confidence 499999999 9999999999999999999887654
No 199
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.85 E-value=0.0022 Score=58.43 Aligned_cols=89 Identities=21% Similarity=0.207 Sum_probs=56.5
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
.|+||||++ |+|..|+++|.+|.+.|+.|.--++..+ |.. .|..+.++. .++++
T Consensus 7 ~k~VlItgc-----------------s~GGIG~ala~ef~~~G~~V~AtaR~~e--~M~-~L~~~~gl~------~~kLD 60 (289)
T KOG1209|consen 7 PKKVLITGC-----------------SSGGIGYALAKEFARNGYLVYATARRLE--PMA-QLAIQFGLK------PYKLD 60 (289)
T ss_pred CCeEEEeec-----------------CCcchhHHHHHHHHhCCeEEEEEccccc--hHh-hHHHhhCCe------eEEec
Confidence 489999999 7999999999999999999988777644 321 112112221 13455
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
|.+.+.. ...+..+. -...++-|++|.+|.++=-.
T Consensus 61 V~~~~~V--------~~v~~evr--~~~~Gkld~L~NNAG~~C~~ 95 (289)
T KOG1209|consen 61 VSKPEEV--------VTVSGEVR--ANPDGKLDLLYNNAGQSCTF 95 (289)
T ss_pred cCChHHH--------HHHHHHHh--hCCCCceEEEEcCCCCCccc
Confidence 5433211 12222221 12568889999999887544
No 200
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.003 Score=56.87 Aligned_cols=36 Identities=25% Similarity=0.313 Sum_probs=32.5
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+++ |++|||+| +|..|.++|+.|+++|+.|+++.+.
T Consensus 5 ~~~--k~vlItG~------------------~~giG~~ia~~l~~~G~~V~~~~r~ 40 (259)
T PRK06125 5 LAG--KRVLITGA------------------SKGIGAAAAEAFAAEGCHLHLVARD 40 (259)
T ss_pred CCC--CEEEEeCC------------------CchHHHHHHHHHHHcCCEEEEEeCC
Confidence 444 99999999 8999999999999999999998864
No 201
>PLN02572 UDP-sulfoquinovose synthase
Probab=96.81 E-value=0.005 Score=61.06 Aligned_cols=33 Identities=33% Similarity=0.477 Sum_probs=30.8
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEee
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
+++||||+| ||..|.+|+++|+++|++|+.+.+
T Consensus 47 ~k~VLVTGa------------------tGfIGs~Lv~~L~~~G~~V~~~d~ 79 (442)
T PLN02572 47 KKKVMVIGG------------------DGYCGWATALHLSKRGYEVAIVDN 79 (442)
T ss_pred CCEEEEECC------------------CcHHHHHHHHHHHHCCCeEEEEec
Confidence 499999999 999999999999999999999864
No 202
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=96.81 E-value=0.0049 Score=59.43 Aligned_cols=39 Identities=15% Similarity=0.156 Sum_probs=35.2
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.+.+|+||||+| ||..|.+++++|.++|++|+.+.+.
T Consensus 16 ~~~~~~~~IlVtGg------------------tGfIG~~l~~~L~~~G~~V~~v~r~ 54 (370)
T PLN02695 16 YWPSEKLRICITGA------------------GGFIASHIARRLKAEGHYIIASDWK 54 (370)
T ss_pred CCCCCCCEEEEECC------------------ccHHHHHHHHHHHhCCCEEEEEEec
Confidence 45566799999999 9999999999999999999999874
No 203
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=96.79 E-value=0.0069 Score=57.20 Aligned_cols=32 Identities=22% Similarity=0.321 Sum_probs=28.7
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEee
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
++||||+| ||..|.++++.|+++|++|+.+..
T Consensus 2 ~~vlVtGa------------------tGfIG~~l~~~L~~~g~~~v~~~~ 33 (355)
T PRK10217 2 RKILITGG------------------AGFIGSALVRYIINETSDAVVVVD 33 (355)
T ss_pred cEEEEEcC------------------CcHHHHHHHHHHHHcCCCEEEEEe
Confidence 68999999 999999999999999998766544
No 204
>PLN02427 UDP-apiose/xylose synthase
Probab=96.76 E-value=0.0052 Score=59.10 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=30.8
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHC-CCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-GYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~-Ga~V~~i~g~ 94 (292)
.++||||+| ||-.|..+++.|+++ |++|+.+.+.
T Consensus 14 ~~~VlVTGg------------------tGfIGs~lv~~L~~~~g~~V~~l~r~ 48 (386)
T PLN02427 14 PLTICMIGA------------------GGFIGSHLCEKLMTETPHKVLALDVY 48 (386)
T ss_pred CcEEEEECC------------------cchHHHHHHHHHHhcCCCEEEEEecC
Confidence 389999999 999999999999999 5999988764
No 205
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.0064 Score=53.80 Aligned_cols=36 Identities=31% Similarity=0.278 Sum_probs=32.4
Q ss_pred CCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 39 ESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 39 l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
++| +++|||+| +|..|..+|+.|+++|+.|+++.+.
T Consensus 7 ~~~--~~~lItGa------------------~g~iG~~~a~~l~~~g~~V~~~~r~ 42 (245)
T PRK07060 7 FSG--KSVLVTGA------------------SSGIGRACAVALAQRGARVVAAARN 42 (245)
T ss_pred cCC--CEEEEeCC------------------cchHHHHHHHHHHHCCCEEEEEeCC
Confidence 444 99999999 9999999999999999999988764
No 206
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.74 E-value=0.0035 Score=59.66 Aligned_cols=89 Identities=21% Similarity=0.184 Sum_probs=59.1
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCC-CCccCCCCCccchhhhhcccccceE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTC-EPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~-~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
++|+||+| |-.+|.++|.++...|++|+.+.++... .+..+++...+.+. +
T Consensus 34 ~hi~itgg------------------S~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~----------~ 85 (331)
T KOG1210|consen 34 RHILITGG------------------SSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVE----------D 85 (331)
T ss_pred ceEEEecC------------------cchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccc----------e
Confidence 89999999 7778999999999999999999998652 33333333111111 1
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
|. ..+ ..+.+|+.....+.+.....+..|.+|++|.++
T Consensus 86 v~-~~S---~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 86 VS-YKS---VDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVA 123 (331)
T ss_pred ee-Eec---cccccHHHHHHHHhhhhhccCCcceEEEecCcc
Confidence 11 111 233467777666554434457889999999874
No 207
>PRK08324 short chain dehydrogenase; Validated
Probab=96.73 E-value=0.0053 Score=64.01 Aligned_cols=91 Identities=15% Similarity=0.133 Sum_probs=56.9
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceE
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
+|+||||+| +|.+|.++|+.|+++|+.|+++.+...... .....+. ....+.
T Consensus 422 gk~vLVTGa------------------sggIG~~la~~L~~~Ga~Vvl~~r~~~~~~--------~~~~~l~--~~~~v~ 473 (681)
T PRK08324 422 GKVALVTGA------------------AGGIGKATAKRLAAEGACVVLADLDEEAAE--------AAAAELG--GPDRAL 473 (681)
T ss_pred CCEEEEecC------------------CCHHHHHHHHHHHHCcCEEEEEeCCHHHHH--------HHHHHHh--ccCcEE
Confidence 399999999 999999999999999999999886532100 0000000 000121
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
+... .+.+..++.+.+.+..+.++..|++|++|+++...
T Consensus 474 ~v~~------Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~ 512 (681)
T PRK08324 474 GVAC------DVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISG 512 (681)
T ss_pred EEEe------cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 1111 11233455555555566678899999999987543
No 208
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=96.72 E-value=0.0018 Score=61.08 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=30.2
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCC--CeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG--YAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~G--a~V~~i~g~ 94 (292)
+|+||||+| ||..|.++++.|+++| ++|+++.+.
T Consensus 4 ~k~vLVTGa------------------tG~IG~~l~~~L~~~g~~~~V~~~~r~ 39 (324)
T TIGR03589 4 NKSILITGG------------------TGSFGKAFISRLLENYNPKKIIIYSRD 39 (324)
T ss_pred CCEEEEeCC------------------CCHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 399999999 9999999999999997 788887653
No 209
>PRK07023 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.0085 Score=53.31 Aligned_cols=33 Identities=39% Similarity=0.343 Sum_probs=30.6
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+++|||+| ||..|.++|+.|+++|++|+++.+.
T Consensus 2 ~~vlItGa------------------sggiG~~ia~~l~~~G~~v~~~~r~ 34 (243)
T PRK07023 2 VRAIVTGH------------------SRGLGAALAEQLLQPGIAVLGVARS 34 (243)
T ss_pred ceEEEecC------------------CcchHHHHHHHHHhCCCEEEEEecC
Confidence 57999999 9999999999999999999998764
No 210
>PRK08017 oxidoreductase; Provisional
Probab=96.71 E-value=0.0048 Score=55.08 Aligned_cols=33 Identities=24% Similarity=0.346 Sum_probs=30.6
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|+||||+| ||.+|.++|+.++++|+.|+++.+.
T Consensus 3 k~vlVtGa------------------sg~IG~~la~~l~~~g~~v~~~~r~ 35 (256)
T PRK08017 3 KSVLITGC------------------SSGIGLEAALELKRRGYRVLAACRK 35 (256)
T ss_pred CEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 68999999 9999999999999999999888764
No 211
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=96.70 E-value=0.0072 Score=55.77 Aligned_cols=34 Identities=29% Similarity=0.327 Sum_probs=31.3
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
++||||+| +|..|..+|+.|+++|++|+.+.+..
T Consensus 1 ~~vlItG~------------------~G~iG~~l~~~L~~~g~~V~~~~r~~ 34 (328)
T TIGR03466 1 MKVLVTGA------------------TGFVGSAVVRLLLEQGEEVRVLVRPT 34 (328)
T ss_pred CeEEEECC------------------ccchhHHHHHHHHHCCCEEEEEEecC
Confidence 47999999 99999999999999999999999853
No 212
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.64 E-value=0.0067 Score=56.54 Aligned_cols=97 Identities=19% Similarity=0.131 Sum_probs=58.2
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
.|.| |++|||+| |...|.++|+.|++.|+.|+...+.....-. .-.+......
T Consensus 5 ~l~g--kvalVTG~------------------s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~-------~~~~~~~~~~ 57 (270)
T KOG0725|consen 5 RLAG--KVALVTGG------------------SSGIGKAIALLLAKAGAKVVITGRSEERLEE-------TAQELGGLGY 57 (270)
T ss_pred cCCC--cEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-------HHHHHHhcCC
Confidence 4655 99999999 7789999999999999999999886331000 0000000000
Q ss_pred -ccceEEeecccccccchhHHHHHHHHHHHHHhh-cCCCceEEEeecccCCc
Q 022803 118 -ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRS-LGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 118 -~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~-~~~~d~~i~aAAVsDf~ 167 (292)
..++..... .|.+-.+..+.+....+. +++.|++|.+|++....
T Consensus 58 ~~~~~~~~~~------Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~ 103 (270)
T KOG0725|consen 58 TGGKVLAIVC------DVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLT 103 (270)
T ss_pred CCCeeEEEEC------cCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCC
Confidence 001111000 000113344444455666 79999999999998866
No 213
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.64 E-value=0.003 Score=64.28 Aligned_cols=86 Identities=17% Similarity=0.271 Sum_probs=54.4
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhh-hhcccccc
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLEC-FEVTEESA 120 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~-~~~~~~~~ 120 (292)
.||+||||+| +|..|.++++.+++.+...+.+.+.+...=| .++. +. .....
T Consensus 249 ~gK~vLVTGa------------------gGSiGsel~~qil~~~p~~i~l~~~~E~~~~--------~i~~el~-~~~~~ 301 (588)
T COG1086 249 TGKTVLVTGG------------------GGSIGSELCRQILKFNPKEIILFSRDEYKLY--------LIDMELR-EKFPE 301 (588)
T ss_pred CCCEEEEeCC------------------CCcHHHHHHHHHHhcCCCEEEEecCchHHHH--------HHHHHHH-hhCCC
Confidence 3499999999 9999999999999999998888876532111 0000 00 00001
Q ss_pred eEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecc
Q 022803 121 VQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAV 163 (292)
Q Consensus 121 i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAV 163 (292)
.++... -.+|.|+..|.++ ++. -+.|+++||||-
T Consensus 302 ~~~~~~----igdVrD~~~~~~~----~~~-~kvd~VfHAAA~ 335 (588)
T COG1086 302 LKLRFY----IGDVRDRDRVERA----MEG-HKVDIVFHAAAL 335 (588)
T ss_pred cceEEE----ecccccHHHHHHH----Hhc-CCCceEEEhhhh
Confidence 111100 1456677777765 332 347999999996
No 214
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=96.63 E-value=0.0056 Score=57.05 Aligned_cols=32 Identities=19% Similarity=0.163 Sum_probs=28.2
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
++||||+| +|-.|.++++.|+++| +|+.+.+.
T Consensus 1 m~iLVtG~------------------~GfiGs~l~~~L~~~g-~V~~~~~~ 32 (299)
T PRK09987 1 MNILLFGK------------------TGQVGWELQRALAPLG-NLIALDVH 32 (299)
T ss_pred CeEEEECC------------------CCHHHHHHHHHhhccC-CEEEeccc
Confidence 47999999 9999999999999999 78776653
No 215
>PRK07578 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.0091 Score=51.66 Aligned_cols=32 Identities=31% Similarity=0.188 Sum_probs=28.8
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+++|||+| ||.+|.++|+.|+++ ++|+++.+.
T Consensus 1 ~~vlItGa------------------s~giG~~la~~l~~~-~~vi~~~r~ 32 (199)
T PRK07578 1 MKILVIGA------------------SGTIGRAVVAELSKR-HEVITAGRS 32 (199)
T ss_pred CeEEEEcC------------------CcHHHHHHHHHHHhc-CcEEEEecC
Confidence 36899999 999999999999999 999998764
No 216
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=96.60 E-value=0.0043 Score=57.84 Aligned_cols=74 Identities=18% Similarity=0.175 Sum_probs=44.8
Q ss_pred ccHHHHHHHHHHHHCC--CeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEEeecccccccchhHHHHHHHHHHHH
Q 022803 70 SGHRGAASTEHLIKMG--YAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVS 147 (292)
Q Consensus 70 SG~~G~~iAe~~~~~G--a~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~ 147 (292)
||-.|..|++.|+++| +.|..+........ ...+.. ....+.. ...+.++..+.++
T Consensus 6 sGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~-~~~~~~-----------~~~~~~~------~~Di~d~~~l~~a---- 63 (280)
T PF01073_consen 6 SGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF-LKDLQK-----------SGVKEYI------QGDITDPESLEEA---- 63 (280)
T ss_pred CcHHHHHHHHHHHHCCCceEEEEccccccccc-chhhhc-----------ccceeEE------EeccccHHHHHHH----
Confidence 9999999999999999 78887775432110 000010 0001011 1223344555544
Q ss_pred HhhcCCCceEEEeecccCCcC
Q 022803 148 SRSLGPCSMFYLAAAVSDFYV 168 (292)
Q Consensus 148 l~~~~~~d~~i~aAAVsDf~v 168 (292)
+..+|++||+||+.++.-
T Consensus 64 ---~~g~d~V~H~Aa~~~~~~ 81 (280)
T PF01073_consen 64 ---LEGVDVVFHTAAPVPPWG 81 (280)
T ss_pred ---hcCCceEEEeCccccccC
Confidence 457899999999988763
No 217
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=96.60 E-value=0.0079 Score=53.20 Aligned_cols=81 Identities=12% Similarity=0.201 Sum_probs=46.5
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEEeecccccccchhHHHHHHHHHHHHHh
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVSSR 149 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~ 149 (292)
||..|.++|+.|+++|++|+++++..... . . ...+.+. .....+..... .+.+..++.+.+.+..+
T Consensus 7 s~giG~~~a~~l~~~G~~v~~~~~~~~~~--~---~--~~~~~l~-~~~~~~~~~~~------Dl~~~~~~~~~~~~~~~ 72 (239)
T TIGR01831 7 SRGIGRAIANRLAADGFEICVHYHSGRSD--A---E--SVVSAIQ-AQGGNARLLQF------DVADRVACRTLLEADIA 72 (239)
T ss_pred CchHHHHHHHHHHHCCCEEEEEeCCCHHH--H---H--HHHHHHH-HcCCeEEEEEc------cCCCHHHHHHHHHHHHH
Confidence 89999999999999999999887643210 0 0 0000000 00111222111 11233455555555556
Q ss_pred hcCCCceEEEeeccc
Q 022803 150 SLGPCSMFYLAAAVS 164 (292)
Q Consensus 150 ~~~~~d~~i~aAAVs 164 (292)
.++..|++|++|++.
T Consensus 73 ~~~~i~~li~~ag~~ 87 (239)
T TIGR01831 73 EHGAYYGVVLNAGIT 87 (239)
T ss_pred HcCCCCEEEECCCCC
Confidence 678889999999874
No 218
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=96.59 E-value=0.0079 Score=52.79 Aligned_cols=83 Identities=19% Similarity=0.189 Sum_probs=47.0
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEEeecccccccchhHHHHHHHHHHHHHh
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVSSR 149 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~ 149 (292)
+|..|..+|+.|+++|++|+++.+..... +. ...+.+. .....+.+... .+.+..++.+.+..+.+
T Consensus 7 ~g~iG~~la~~l~~~G~~v~~~~r~~~~~-----~~--~~~~~~~-~~~~~~~~~~~------D~~~~~~~~~~~~~~~~ 72 (239)
T TIGR01830 7 SRGIGRAIALKLAKEGAKVIITYRSSEEG-----AE--EVVEELK-AYGVKALGVVC------DVSDREDVKAVVEEIEE 72 (239)
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeCCchhH-----HH--HHHHHHH-hcCCceEEEEe------cCCCHHHHHHHHHHHHH
Confidence 99999999999999999999998753100 00 0000000 00011111111 11122444444444455
Q ss_pred hcCCCceEEEeecccCC
Q 022803 150 SLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 150 ~~~~~d~~i~aAAVsDf 166 (292)
.++..|++||+|+....
T Consensus 73 ~~~~id~vi~~ag~~~~ 89 (239)
T TIGR01830 73 ELGPIDILVNNAGITRD 89 (239)
T ss_pred HhCCCCEEEECCCCCCC
Confidence 56789999999998654
No 219
>PLN02206 UDP-glucuronate decarboxylase
Probab=96.58 E-value=0.0052 Score=61.04 Aligned_cols=35 Identities=26% Similarity=0.330 Sum_probs=32.0
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
++++||||+| ||-.|..|+++|+++|++|+.+.+.
T Consensus 118 ~~~kILVTGa------------------tGfIGs~Lv~~Ll~~G~~V~~ld~~ 152 (442)
T PLN02206 118 KGLRVVVTGG------------------AGFVGSHLVDRLMARGDSVIVVDNF 152 (442)
T ss_pred CCCEEEEECc------------------ccHHHHHHHHHHHHCcCEEEEEeCC
Confidence 5589999999 9999999999999999999988653
No 220
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=96.58 E-value=0.0026 Score=58.31 Aligned_cols=87 Identities=18% Similarity=0.201 Sum_probs=62.1
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCcc-----CCCCCccchhhhhccc
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYC-----SSLPDDAFLECFEVTE 117 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~-----~~l~~~~~~~~~~~~~ 117 (292)
||.+|+|+| -|..|.+.+++++.+|+.|..|.-.... |.+ ...| .+.++
T Consensus 5 GKna~vtgg------------------agGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p---~~~v~---- 58 (261)
T KOG4169|consen 5 GKNALVTGG------------------AGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINP---SVSVI---- 58 (261)
T ss_pred CceEEEecC------------------CchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCC---CceEE----
Confidence 499999999 8999999999999999999888754321 210 0111 11111
Q ss_pred ccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 118 ESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 118 ~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
+-+++|. +-.++.+++.+++..++..|++|..|.|+|=
T Consensus 59 F~~~DVt-----------~~~~~~~~f~ki~~~fg~iDIlINgAGi~~d 96 (261)
T KOG4169|consen 59 FIKCDVT-----------NRGDLEAAFDKILATFGTIDILINGAGILDD 96 (261)
T ss_pred EEEeccc-----------cHHHHHHHHHHHHHHhCceEEEEcccccccc
Confidence 1223343 2367788888889999999999999999983
No 221
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.57 E-value=0.0074 Score=56.92 Aligned_cols=37 Identities=16% Similarity=0.243 Sum_probs=30.5
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEe
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 92 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~ 92 (292)
++.| |++|||+|+. |..+|.++|+.|+++||.|++-.
T Consensus 5 ~~~g--k~alITGa~~----------------~~GIG~a~A~~la~~Ga~Vvv~~ 41 (299)
T PRK06300 5 DLTG--KIAFIAGIGD----------------DQGYGWGIAKALAEAGATILVGT 41 (299)
T ss_pred CCCC--CEEEEeCCCC----------------CCCHHHHHHHHHHHCCCEEEEEe
Confidence 4555 9999999931 35799999999999999998854
No 222
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=96.54 E-value=0.0058 Score=63.46 Aligned_cols=36 Identities=25% Similarity=0.236 Sum_probs=32.1
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHC-CCeEEEEeeCC
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-GYAVIFLYRRG 95 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~-Ga~V~~i~g~~ 95 (292)
++++||||+| ||-.|..++++|+++ |++|+.+.+..
T Consensus 314 ~~~~VLVTGa------------------tGFIGs~Lv~~Ll~~~g~~V~~l~r~~ 350 (660)
T PRK08125 314 RRTRVLILGV------------------NGFIGNHLTERLLRDDNYEVYGLDIGS 350 (660)
T ss_pred cCCEEEEECC------------------CchHHHHHHHHHHhCCCcEEEEEeCCc
Confidence 3489999999 999999999999986 79999998753
No 223
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.48 E-value=0.0091 Score=50.75 Aligned_cols=26 Identities=31% Similarity=0.434 Sum_probs=24.7
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
||..|..++++|+++|++|+.+.+..
T Consensus 7 tG~vG~~l~~~L~~~~~~V~~~~R~~ 32 (183)
T PF13460_consen 7 TGFVGRALAKQLLRRGHEVTALVRSP 32 (183)
T ss_dssp TSHHHHHHHHHHHHTTSEEEEEESSG
T ss_pred CChHHHHHHHHHHHCCCEEEEEecCc
Confidence 99999999999999999999999864
No 224
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=96.47 E-value=0.0083 Score=59.52 Aligned_cols=35 Identities=31% Similarity=0.382 Sum_probs=32.0
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
..++||||+| ||-.|..|+++|+++|++|+.+.+.
T Consensus 119 ~~mkILVTGa------------------tGFIGs~Lv~~Ll~~G~~V~~ldr~ 153 (436)
T PLN02166 119 KRLRIVVTGG------------------AGFVGSHLVDKLIGRGDEVIVIDNF 153 (436)
T ss_pred CCCEEEEECC------------------ccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4478999999 9999999999999999999998764
No 225
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=96.47 E-value=0.0087 Score=51.90 Aligned_cols=92 Identities=21% Similarity=0.187 Sum_probs=49.5
Q ss_pred eEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCe-EEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA-VIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 45 ~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~-V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
.+|||+| +|.+|..+|++++.+|+. |+++.++....+. ....++-+.. ....+.+
T Consensus 2 tylitGG------------------~gglg~~la~~La~~~~~~~il~~r~~~~~~~-----~~~~i~~l~~-~g~~v~~ 57 (181)
T PF08659_consen 2 TYLITGG------------------LGGLGQSLARWLAERGARRLILLGRSGAPSAE-----AEAAIRELES-AGARVEY 57 (181)
T ss_dssp EEEEETT------------------TSHHHHHHHHHHHHTT-SEEEEEESSGGGSTT-----HHHHHHHHHH-TT-EEEE
T ss_pred EEEEECC------------------ccHHHHHHHHHHHHcCCCEEEEeccCCCccHH-----HHHHHHHHHh-CCCceee
Confidence 5899999 999999999999999874 5665554221111 0012222211 1122333
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCC
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDF 166 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf 166 (292)
.+. .+.++.++.+.+..+.+..++.+.+||+|.+.+-
T Consensus 58 ~~~------Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~ 94 (181)
T PF08659_consen 58 VQC------DVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLAD 94 (181)
T ss_dssp EE--------TTSHHHHHHHHHTSHTTSS-EEEEEE-------
T ss_pred ecc------CccCHHHHHHHHHHHHhccCCcceeeeeeeeecc
Confidence 222 2335677777776666666788999999998653
No 226
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=96.45 E-value=0.0074 Score=55.81 Aligned_cols=31 Identities=26% Similarity=0.354 Sum_probs=28.1
Q ss_pred EEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 46 ACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 46 VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
||||+| ||-.|..|++.|+++|++|+.+.+.
T Consensus 2 ilVtGa------------------~GfiG~~l~~~L~~~g~~~v~~~~~ 32 (308)
T PRK11150 2 IIVTGG------------------AGFIGSNIVKALNDKGITDILVVDN 32 (308)
T ss_pred EEEecC------------------CcHHHHHHHHHHHhCCCceEEEecC
Confidence 799999 9999999999999999988777654
No 227
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=96.39 E-value=0.013 Score=51.73 Aligned_cols=28 Identities=21% Similarity=0.203 Sum_probs=24.2
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVI 89 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~ 89 (292)
|+||||+| ||..|.++|+.|+++|+.+.
T Consensus 1 ~~vlItGa------------------s~gIG~~ia~~l~~~~~~~~ 28 (235)
T PRK09009 1 MNILIVGG------------------SGGIGKAMVKQLLERYPDAT 28 (235)
T ss_pred CEEEEECC------------------CChHHHHHHHHHHHhCCCCE
Confidence 57999999 99999999999999964443
No 228
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.35 E-value=0.012 Score=56.29 Aligned_cols=92 Identities=16% Similarity=0.136 Sum_probs=54.7
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccce
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAV 121 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i 121 (292)
.++.++||+| +...|.++|++++.+|+.|++.++..... . ..-.+.........+
T Consensus 34 ~~~~~vVTGa------------------nsGIG~eta~~La~~Ga~Vv~~~R~~~~~-~------~~~~~i~~~~~~~~i 88 (314)
T KOG1208|consen 34 SGKVALVTGA------------------TSGIGFETARELALRGAHVVLACRNEERG-E------EAKEQIQKGKANQKI 88 (314)
T ss_pred CCcEEEEECC------------------CCchHHHHHHHHHhCCCEEEEEeCCHHHH-H------HHHHHHHhcCCCCce
Confidence 3488889888 77899999999999999999999864110 0 000000000011222
Q ss_pred EEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 122 QGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 122 ~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
.+..- .+.+.....+..+........-|++|.+|+|.
T Consensus 89 ~~~~l------DLssl~SV~~fa~~~~~~~~~ldvLInNAGV~ 125 (314)
T KOG1208|consen 89 RVIQL------DLSSLKSVRKFAEEFKKKEGPLDVLINNAGVM 125 (314)
T ss_pred EEEEC------CCCCHHHHHHHHHHHHhcCCCccEEEeCcccc
Confidence 22211 11122344444444455678889999999994
No 229
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.32 E-value=0.0095 Score=55.81 Aligned_cols=34 Identities=24% Similarity=0.271 Sum_probs=31.3
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
++||||+| ||..|..++++|+++|++|+.+.+..
T Consensus 1 MkIlVtGa------------------tG~iG~~lv~~Ll~~g~~V~~l~R~~ 34 (317)
T CHL00194 1 MSLLVIGA------------------TGTLGRQIVRQALDEGYQVRCLVRNL 34 (317)
T ss_pred CEEEEECC------------------CcHHHHHHHHHHHHCCCeEEEEEcCh
Confidence 47999999 99999999999999999999998753
No 230
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=96.30 E-value=0.011 Score=53.90 Aligned_cols=32 Identities=22% Similarity=0.271 Sum_probs=29.5
Q ss_pred eEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 45 ~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+||||+| ||..|.++++.|+++|++|+.+.+.
T Consensus 1 kilv~G~------------------tG~iG~~l~~~l~~~g~~v~~~~r~ 32 (287)
T TIGR01214 1 RILITGA------------------NGQLGRELVQQLSPEGRVVVALTSS 32 (287)
T ss_pred CEEEEcC------------------CCHHHHHHHHHHHhcCCEEEEeCCc
Confidence 5899999 9999999999999999999988764
No 231
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=96.30 E-value=0.007 Score=57.20 Aligned_cols=33 Identities=9% Similarity=0.178 Sum_probs=29.8
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHC-CCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-GYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~-Ga~V~~i~g~ 94 (292)
++||||+| ||-.|..|+++|+++ |++|+.+.+.
T Consensus 2 ~~ilVtGa------------------tGfiGs~l~~~L~~~~~~~V~~~~r~ 35 (347)
T PRK11908 2 KKVLILGV------------------NGFIGHHLSKRILETTDWEVYGMDMQ 35 (347)
T ss_pred cEEEEECC------------------CcHHHHHHHHHHHhCCCCeEEEEeCc
Confidence 67999999 999999999999987 7999988753
No 232
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.0058 Score=53.32 Aligned_cols=32 Identities=25% Similarity=0.182 Sum_probs=30.1
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|++|||+| +|..|.++|+.++++ ++|+.+.+.
T Consensus 4 ~~vlVtG~------------------~g~iG~~l~~~l~~~-~~V~~~~r~ 35 (227)
T PRK08219 4 PTALITGA------------------SRGIGAAIARELAPT-HTLLLGGRP 35 (227)
T ss_pred CEEEEecC------------------CcHHHHHHHHHHHhh-CCEEEEeCC
Confidence 79999999 999999999999999 999999875
No 233
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=96.23 E-value=0.022 Score=53.16 Aligned_cols=33 Identities=30% Similarity=0.367 Sum_probs=30.1
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
++||||+| ||..|.++|+.|+++|++|+++.+.
T Consensus 1 m~vlVtGa------------------tG~iG~~l~~~L~~~g~~V~~~~~~ 33 (338)
T PRK10675 1 MRVLVTGG------------------SGYIGSHTCVQLLQNGHDVVILDNL 33 (338)
T ss_pred CeEEEECC------------------CChHHHHHHHHHHHCCCeEEEEecC
Confidence 47999999 9999999999999999999998653
No 234
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.20 E-value=0.01 Score=53.50 Aligned_cols=34 Identities=26% Similarity=0.401 Sum_probs=31.4
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+++||||+| ||..|..+++.++.+|++|+.+.+.
T Consensus 17 ~~~ilItGa------------------sG~iG~~l~~~L~~~g~~V~~~~R~ 50 (251)
T PLN00141 17 TKTVFVAGA------------------TGRTGKRIVEQLLAKGFAVKAGVRD 50 (251)
T ss_pred CCeEEEECC------------------CcHHHHHHHHHHHhCCCEEEEEecC
Confidence 489999999 9999999999999999999988764
No 235
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.0057 Score=56.17 Aligned_cols=85 Identities=18% Similarity=0.151 Sum_probs=48.7
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
|.+|||++ + ..|.++|+.|. +|+.|+++.+..... . ...+-+.. ....+.+
T Consensus 3 k~~lItGa------------------~-gIG~~la~~l~-~G~~Vv~~~r~~~~~------~--~~~~~l~~-~~~~~~~ 53 (275)
T PRK06940 3 EVVVVIGA------------------G-GIGQAIARRVG-AGKKVLLADYNEENL------E--AAAKTLRE-AGFDVST 53 (275)
T ss_pred CEEEEECC------------------C-hHHHHHHHHHh-CCCEEEEEeCCHHHH------H--HHHHHHHh-cCCeEEE
Confidence 78888865 4 69999999996 899999987642100 0 00000000 0011211
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
.. ..+.+..++.+.+... +.++..|++|++|++.
T Consensus 54 ~~------~Dv~d~~~i~~~~~~~-~~~g~id~li~nAG~~ 87 (275)
T PRK06940 54 QE------VDVSSRESVKALAATA-QTLGPVTGLVHTAGVS 87 (275)
T ss_pred EE------eecCCHHHHHHHHHHH-HhcCCCCEEEECCCcC
Confidence 11 1122334555555443 4468899999999985
No 236
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.12 E-value=0.023 Score=51.94 Aligned_cols=34 Identities=32% Similarity=0.306 Sum_probs=31.1
Q ss_pred eEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCC
Q 022803 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (292)
Q Consensus 45 ~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~ 96 (292)
.||||+| ||-.|..+++.|+++|++|..+.+...
T Consensus 2 ~ILVtG~------------------tGfiG~~l~~~L~~~g~~V~~~~r~~~ 35 (314)
T COG0451 2 RILVTGG------------------AGFIGSHLVERLLAAGHDVRGLDRLRD 35 (314)
T ss_pred eEEEEcC------------------cccHHHHHHHHHHhCCCeEEEEeCCCc
Confidence 4999999 999999999999999999999997543
No 237
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=96.09 E-value=0.013 Score=53.61 Aligned_cols=31 Identities=26% Similarity=0.311 Sum_probs=28.2
Q ss_pred eEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCC--CeEEEEee
Q 022803 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG--YAVIFLYR 93 (292)
Q Consensus 45 ~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~G--a~V~~i~g 93 (292)
+||||+| ||..|.++++.|+++| ++|+.+.+
T Consensus 1 ~ilItGa------------------tG~iG~~l~~~l~~~~~~~~v~~~~~ 33 (317)
T TIGR01181 1 RILVTGG------------------AGFIGSNFVRYILNEHPDAEVIVLDK 33 (317)
T ss_pred CEEEEcC------------------CchHHHHHHHHHHHhCCCCEEEEecC
Confidence 5899999 9999999999999998 78988875
No 238
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.0093 Score=54.28 Aligned_cols=37 Identities=30% Similarity=0.273 Sum_probs=33.3
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.++| |++|||+| ||.+|.++|+.|+++|+.|+++.+.
T Consensus 11 ~l~~--k~~lITGa------------------s~gIG~ala~~l~~~G~~Vi~~~r~ 47 (245)
T PRK12367 11 TWQG--KRIGITGA------------------SGALGKALTKAFRAKGAKVIGLTHS 47 (245)
T ss_pred hhCC--CEEEEEcC------------------CcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4555 99999999 9999999999999999999998764
No 239
>PLN00015 protochlorophyllide reductase
Probab=96.01 E-value=0.018 Score=53.73 Aligned_cols=80 Identities=19% Similarity=0.120 Sum_probs=45.8
Q ss_pred ccHHHHHHHHHHHHCC-CeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEEeecccccccchhHHHHHHHHHHHHH
Q 022803 70 SGHRGAASTEHLIKMG-YAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVSS 148 (292)
Q Consensus 70 SG~~G~~iAe~~~~~G-a~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l 148 (292)
||.+|.++|+.|+++| +.|+++.+...... ...+.+. .....+.+.. ..+.+..++.+.+..+.
T Consensus 6 s~GIG~aia~~l~~~G~~~V~~~~r~~~~~~--------~~~~~l~-~~~~~~~~~~------~Dl~d~~~v~~~~~~~~ 70 (308)
T PLN00015 6 SSGLGLATAKALAETGKWHVVMACRDFLKAE--------RAAKSAG-MPKDSYTVMH------LDLASLDSVRQFVDNFR 70 (308)
T ss_pred CChHHHHHHHHHHHCCCCEEEEEeCCHHHHH--------HHHHHhc-CCCCeEEEEE------ecCCCHHHHHHHHHHHH
Confidence 8899999999999999 99988875321100 0000000 0001121111 11223345555555555
Q ss_pred hhcCCCceEEEeeccc
Q 022803 149 RSLGPCSMFYLAAAVS 164 (292)
Q Consensus 149 ~~~~~~d~~i~aAAVs 164 (292)
+.++..|++|++|++.
T Consensus 71 ~~~~~iD~lInnAG~~ 86 (308)
T PLN00015 71 RSGRPLDVLVCNAAVY 86 (308)
T ss_pred hcCCCCCEEEECCCcC
Confidence 5567889999999985
No 240
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=95.98 E-value=0.009 Score=55.67 Aligned_cols=33 Identities=33% Similarity=0.379 Sum_probs=29.8
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|||||+| ||..|.+|+++|..+|++|+.+.++
T Consensus 1 MriLI~Ga------------------sG~lG~~l~~~l~~~~~~v~~~~r~ 33 (286)
T PF04321_consen 1 MRILITGA------------------SGFLGSALARALKERGYEVIATSRS 33 (286)
T ss_dssp EEEEEETT------------------TSHHHHHHHHHHTTTSEEEEEESTT
T ss_pred CEEEEECC------------------CCHHHHHHHHHHhhCCCEEEEeCch
Confidence 58999999 9999999999999999999888543
No 241
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=95.94 E-value=0.037 Score=52.18 Aligned_cols=30 Identities=27% Similarity=0.328 Sum_probs=26.4
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFL 91 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i 91 (292)
++||||+| ||..|..++++|+++|+.+++.
T Consensus 1 mkilITGg------------------tG~iG~~l~~~L~~~g~~~v~~ 30 (352)
T PRK10084 1 MKILVTGG------------------AGFIGSAVVRHIINNTQDSVVN 30 (352)
T ss_pred CeEEEECC------------------CcHHhHHHHHHHHHhCCCeEEE
Confidence 37999999 9999999999999999875443
No 242
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=95.92 E-value=0.015 Score=51.87 Aligned_cols=82 Identities=18% Similarity=0.102 Sum_probs=51.5
Q ss_pred CccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEEeecccccccchhHHHHHHHHHHHHH
Q 022803 69 SSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVSS 148 (292)
Q Consensus 69 SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l 148 (292)
+|+.+|.++|+.|++.||.|++.++..... . ..++-+... ...++... .+.+..++.+.+.++.
T Consensus 4 ~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~------~--~~~~~l~~~--~~~~~~~~------D~~~~~~v~~~~~~~~ 67 (241)
T PF13561_consen 4 SSSGIGRAIARALAEEGANVILTDRNEEKL------A--DALEELAKE--YGAEVIQC------DLSDEESVEALFDEAV 67 (241)
T ss_dssp STSHHHHHHHHHHHHTTEEEEEEESSHHHH------H--HHHHHHHHH--TTSEEEES------CTTSHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHCCCEEEEEeCChHHH------H--HHHHHHHHH--cCCceEee------cCcchHHHHHHHHHHH
Confidence 578999999999999999999999863310 0 001111100 11122211 1113345555666667
Q ss_pred hhc-CCCceEEEeecccCC
Q 022803 149 RSL-GPCSMFYLAAAVSDF 166 (292)
Q Consensus 149 ~~~-~~~d~~i~aAAVsDf 166 (292)
+.+ +..|++|++|+.+..
T Consensus 68 ~~~~g~iD~lV~~a~~~~~ 86 (241)
T PF13561_consen 68 ERFGGRIDILVNNAGISPP 86 (241)
T ss_dssp HHHCSSESEEEEEEESCTG
T ss_pred hhcCCCeEEEEeccccccc
Confidence 778 999999999998775
No 243
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=95.85 E-value=0.028 Score=49.13 Aligned_cols=33 Identities=33% Similarity=0.480 Sum_probs=29.7
Q ss_pred EEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCC
Q 022803 46 ACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (292)
Q Consensus 46 VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~ 96 (292)
||||+| ||-.|.+++++|+++|+.|+.+.+...
T Consensus 1 IlI~Ga------------------tG~iG~~l~~~l~~~g~~v~~~~~~~~ 33 (236)
T PF01370_consen 1 ILITGA------------------TGFIGSALVRQLLKKGHEVIVLSRSSN 33 (236)
T ss_dssp EEEETT------------------TSHHHHHHHHHHHHTTTEEEEEESCST
T ss_pred EEEEcc------------------CCHHHHHHHHHHHHcCCcccccccccc
Confidence 799999 999999999999999999997777543
No 244
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.85 E-value=0.013 Score=55.48 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=32.3
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|+.+|||+| ||..|.++|+.|+++|++|+++.+.
T Consensus 52 ~g~~~lITGA------------------s~GIG~alA~~La~~G~~Vil~~R~ 86 (320)
T PLN02780 52 YGSWALVTGP------------------TDGIGKGFAFQLARKGLNLVLVARN 86 (320)
T ss_pred cCCEEEEeCC------------------CcHHHHHHHHHHHHCCCCEEEEECC
Confidence 3599999999 9999999999999999999999874
No 245
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=95.83 E-value=0.014 Score=52.88 Aligned_cols=26 Identities=38% Similarity=0.431 Sum_probs=24.4
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
||..|..+++.|+++|++|+.+.+..
T Consensus 7 tG~iG~~l~~~L~~~g~~V~~~~r~~ 32 (292)
T TIGR01777 7 TGFIGRALTQRLTKDGHEVTILTRSP 32 (292)
T ss_pred cchhhHHHHHHHHHcCCEEEEEeCCC
Confidence 99999999999999999999999854
No 246
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=95.77 E-value=0.027 Score=51.80 Aligned_cols=31 Identities=23% Similarity=0.338 Sum_probs=27.0
Q ss_pred EEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCC-eEEEEeeC
Q 022803 46 ACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGY-AVIFLYRR 94 (292)
Q Consensus 46 VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga-~V~~i~g~ 94 (292)
||||+| ||-.|.++++.|.++|+ +|+.+.+.
T Consensus 1 ilItGa------------------tG~iG~~l~~~L~~~g~~~v~~~~~~ 32 (314)
T TIGR02197 1 IIVTGG------------------AGFIGSNLVKALNERGITDILVVDNL 32 (314)
T ss_pred CEEeCC------------------cchhhHHHHHHHHHcCCceEEEEecC
Confidence 689999 99999999999999998 67766543
No 247
>PLN02583 cinnamoyl-CoA reductase
Probab=95.72 E-value=0.019 Score=53.30 Aligned_cols=34 Identities=26% Similarity=0.422 Sum_probs=31.6
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|+||||+| ||..|.++++.|+++||+|+.+.+.
T Consensus 6 ~k~vlVTGa------------------tG~IG~~lv~~Ll~~G~~V~~~~R~ 39 (297)
T PLN02583 6 SKSVCVMDA------------------SGYVGFWLVKRLLSRGYTVHAAVQK 39 (297)
T ss_pred CCEEEEECC------------------CCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 489999999 9999999999999999999998764
No 248
>PLN00016 RNA-binding protein; Provisional
Probab=95.57 E-value=0.038 Score=53.15 Aligned_cols=35 Identities=20% Similarity=0.324 Sum_probs=32.3
Q ss_pred CceEEEe----cCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 43 RRVACVT----SGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 43 ~k~VLIT----aG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
.++|||| +| ||..|..++++|+++||+|+.+.+..
T Consensus 52 ~~~VLVt~~~~Ga------------------tG~iG~~lv~~L~~~G~~V~~l~R~~ 90 (378)
T PLN00016 52 KKKVLIVNTNSGG------------------HAFIGFYLAKELVKAGHEVTLFTRGK 90 (378)
T ss_pred cceEEEEeccCCC------------------ceeEhHHHHHHHHHCCCEEEEEecCC
Confidence 3889999 88 99999999999999999999999864
No 249
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.024 Score=50.50 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=30.9
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+++|||+| ||..|.++|+.|+++|++|+++.+.
T Consensus 2 ~~vlItGa------------------s~giG~~la~~L~~~G~~V~~~~r~ 34 (240)
T PRK06101 2 TAVLITGA------------------TSGIGKQLALDYAKQGWQVIACGRN 34 (240)
T ss_pred cEEEEEcC------------------CcHHHHHHHHHHHhCCCEEEEEECC
Confidence 78999999 9999999999999999999998874
No 250
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=95.30 E-value=0.051 Score=56.38 Aligned_cols=31 Identities=16% Similarity=0.081 Sum_probs=27.8
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEE
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIF 90 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~ 90 (292)
..++||||+| +|..|.+|++.|..+|++|++
T Consensus 379 ~~mkiLVtGa------------------~G~iG~~l~~~L~~~g~~v~~ 409 (668)
T PLN02260 379 PSLKFLIYGR------------------TGWIGGLLGKLCEKQGIAYEY 409 (668)
T ss_pred CCceEEEECC------------------CchHHHHHHHHHHhCCCeEEe
Confidence 3478999999 999999999999999999863
No 251
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=95.27 E-value=0.059 Score=48.53 Aligned_cols=32 Identities=28% Similarity=0.311 Sum_probs=28.7
Q ss_pred eEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHH----CCCeEEEEeeC
Q 022803 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIK----MGYAVIFLYRR 94 (292)
Q Consensus 45 ~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~----~Ga~V~~i~g~ 94 (292)
.||||+| ||.+|.++|+.|++ .|+.|+++.+.
T Consensus 2 ~vlItGa------------------s~GIG~~~a~~la~~~~~~g~~V~~~~r~ 37 (256)
T TIGR01500 2 VCLVTGA------------------SRGFGRTIAQELAKCLKSPGSVLVLSARN 37 (256)
T ss_pred EEEEecC------------------CCchHHHHHHHHHHhhccCCcEEEEEEcC
Confidence 5899999 89999999999997 79999999764
No 252
>PRK07041 short chain dehydrogenase; Provisional
Probab=95.22 E-value=0.056 Score=47.43 Aligned_cols=25 Identities=24% Similarity=0.169 Sum_probs=23.5
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
||..|.++|+.|+++|++|+++.++
T Consensus 6 s~~iG~~~a~~l~~~G~~v~~~~r~ 30 (230)
T PRK07041 6 SSGIGLALARAFAAEGARVTIASRS 30 (230)
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 8999999999999999999999875
No 253
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.031 Score=49.79 Aligned_cols=33 Identities=18% Similarity=0.141 Sum_probs=30.7
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|+||||+| ||..|.++|+.|+++|+.|+.+.+.
T Consensus 3 ~~vlVtGa------------------sg~iG~~ia~~l~~~G~~v~~~~r~ 35 (257)
T PRK09291 3 KTILITGA------------------GSGFGREVALRLARKGHNVIAGVQI 35 (257)
T ss_pred CEEEEeCC------------------CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 78999999 9999999999999999999987763
No 254
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=95.04 E-value=0.1 Score=47.76 Aligned_cols=31 Identities=29% Similarity=0.443 Sum_probs=28.5
Q ss_pred eEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEee
Q 022803 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 45 ~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
+||||+| ||..|..+++.|+++|++|+.+.+
T Consensus 1 kvlV~Ga------------------tG~iG~~l~~~l~~~g~~V~~~~~ 31 (328)
T TIGR01179 1 KILVTGG------------------AGYIGSHTVRQLLESGHEVVVLDN 31 (328)
T ss_pred CEEEeCC------------------CCHHHHHHHHHHHhCCCeEEEEeC
Confidence 5899999 999999999999999999988754
No 255
>PRK12320 hypothetical protein; Provisional
Probab=94.99 E-value=0.06 Score=56.70 Aligned_cols=33 Identities=27% Similarity=0.283 Sum_probs=30.5
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
++||||+| +|..|..+++.++++|++|+.+.+.
T Consensus 1 MkILVTGA------------------aGFIGs~La~~Ll~~G~~Vi~ldr~ 33 (699)
T PRK12320 1 MQILVTDA------------------TGAVGRSVTRQLIAAGHTVSGIAQH 33 (699)
T ss_pred CEEEEECC------------------CCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 47999999 9999999999999999999998864
No 256
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=94.97 E-value=0.056 Score=50.92 Aligned_cols=31 Identities=23% Similarity=0.225 Sum_probs=27.6
Q ss_pred eEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 45 ~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+||||++ +|..|.+|++.+. .+++|+-+.++
T Consensus 2 ~iLi~G~------------------~GqLG~~L~~~l~-~~~~v~a~~~~ 32 (281)
T COG1091 2 KILITGA------------------NGQLGTELRRALP-GEFEVIATDRA 32 (281)
T ss_pred cEEEEcC------------------CChHHHHHHHHhC-CCceEEeccCc
Confidence 4999999 9999999999998 77999988764
No 257
>PRK07201 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.09 Score=53.89 Aligned_cols=33 Identities=30% Similarity=0.354 Sum_probs=30.3
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHH--HCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLI--KMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~--~~Ga~V~~i~g~ 94 (292)
++||||+| ||..|.++++.|+ ..|++|+.+.+.
T Consensus 1 m~ILVTGa------------------tGfIG~~lv~~Ll~~~~g~~V~~l~R~ 35 (657)
T PRK07201 1 MRYFVTGG------------------TGFIGRRLVSRLLDRRREATVHVLVRR 35 (657)
T ss_pred CeEEEeCC------------------ccHHHHHHHHHHHhcCCCCEEEEEECc
Confidence 47999999 9999999999999 589999999984
No 258
>PRK08309 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.17 Score=44.21 Aligned_cols=155 Identities=17% Similarity=0.056 Sum_probs=78.5
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
++++||+| || +|.++++.|+++||+|+++.+...... .....+ .....+..
T Consensus 1 m~vlVtGG------------------tG-~gg~la~~L~~~G~~V~v~~R~~~~~~--------~l~~~l--~~~~~i~~ 51 (177)
T PRK08309 1 MHALVIGG------------------TG-MLKRVSLWLCEKGFHVSVIARREVKLE--------NVKRES--TTPESITP 51 (177)
T ss_pred CEEEEECc------------------CH-HHHHHHHHHHHCcCEEEEEECCHHHHH--------HHHHHh--hcCCcEEE
Confidence 46899999 76 666799999999999998876421000 000000 00112221
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCcCCccc-cccccccCCCCCceEEEE---------eCc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKS-MAEHKIQSGSGPLDMQLL---------QVP 193 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~v~~~~-~~~~KI~s~~~~l~l~L~---------~~P 193 (292)
.. ..+.+..++.+.+..+++..+..|++|..+-+. +.-.... ..+..+++..-. -+++- +.+
T Consensus 52 ~~------~Dv~d~~sv~~~i~~~l~~~g~id~lv~~vh~~-~~~~~~~~~~~~gv~~~~~~-~~h~~gs~~~~~~~~~~ 123 (177)
T PRK08309 52 LP------LDYHDDDALKLAIKSTIEKNGPFDLAVAWIHSS-AKDALSVVCRELDGSSETYR-LFHVLGSAASDPRIPSE 123 (177)
T ss_pred EE------ccCCCHHHHHHHHHHHHHHcCCCeEEEEecccc-chhhHHHHHHHHccCCCCce-EEEEeCCcCCchhhhhh
Confidence 11 123345666677766777778888876555442 2210000 112233322100 11111 111
Q ss_pred chhHHHhhccCCCeEEEEEeeccC------cHHHHHHHHHHHHHhCCCEEE
Q 022803 194 KMLSVLRKEWAPMAFCISFKLETD------AEILLEKADMARKKYGMHAVV 238 (292)
Q Consensus 194 kIl~~i~~~~~p~~~lVgFklEt~------~e~l~~~A~~kL~~k~~D~Vv 238 (292)
++.. ....+ .+++.||.+|.+ ++|.-+-..+.++.+-...||
T Consensus 124 ~~~~-~~~~~--~~i~lgf~~~~~~~rwlt~~ei~~gv~~~~~~~~~~~~~ 171 (177)
T PRK08309 124 KIGP-ARCSY--RRVILGFVLEDTYSRWLTHEEISDGVIKAIESDADEHVV 171 (177)
T ss_pred hhhh-cCCce--EEEEEeEEEeCCccccCchHHHHHHHHHHHhcCCCeEEE
Confidence 2211 11111 367899999987 266666666667655555554
No 259
>PLN02686 cinnamoyl-CoA reductase
Probab=94.84 E-value=0.045 Score=52.68 Aligned_cols=35 Identities=31% Similarity=0.568 Sum_probs=31.5
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.+|+||||+| +|..|.++++.|+++||+|+.+.+.
T Consensus 52 ~~k~VLVTGa------------------tGfIG~~lv~~L~~~G~~V~~~~r~ 86 (367)
T PLN02686 52 EARLVCVTGG------------------VSFLGLAIVDRLLRHGYSVRIAVDT 86 (367)
T ss_pred CCCEEEEECC------------------chHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4589999999 9999999999999999999887653
No 260
>PLN02240 UDP-glucose 4-epimerase
Probab=94.83 E-value=0.049 Score=51.15 Aligned_cols=33 Identities=30% Similarity=0.485 Sum_probs=30.9
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|+||||+| ||..|.++++.|+++|++|+.+.+.
T Consensus 6 ~~vlItGa------------------tG~iG~~l~~~L~~~g~~V~~~~~~ 38 (352)
T PLN02240 6 RTILVTGG------------------AGYIGSHTVLQLLLAGYKVVVIDNL 38 (352)
T ss_pred CEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 99999999 9999999999999999999998753
No 261
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.76 E-value=0.051 Score=53.66 Aligned_cols=34 Identities=29% Similarity=0.345 Sum_probs=31.7
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|+||||+| ||..|.++|+.++++|+.|+.+.+.
T Consensus 178 gK~VLITGA------------------SgGIG~aLA~~La~~G~~Vi~l~r~ 211 (406)
T PRK07424 178 GKTVAVTGA------------------SGTLGQALLKELHQQGAKVVALTSN 211 (406)
T ss_pred CCEEEEeCC------------------CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 499999999 9999999999999999999998764
No 262
>PRK05865 hypothetical protein; Provisional
Probab=94.76 E-value=0.095 Score=56.37 Aligned_cols=33 Identities=30% Similarity=0.329 Sum_probs=30.6
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
++||||+| ||..|.+++++++.+|++|+.+.+.
T Consensus 1 MkILVTGA------------------TGfIGs~La~~Ll~~G~~Vv~l~R~ 33 (854)
T PRK05865 1 MRIAVTGA------------------SGVLGRGLTARLLSQGHEVVGIARH 33 (854)
T ss_pred CEEEEECC------------------CCHHHHHHHHHHHHCcCEEEEEECC
Confidence 47999999 9999999999999999999998864
No 263
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=94.71 E-value=0.13 Score=53.44 Aligned_cols=33 Identities=18% Similarity=0.376 Sum_probs=29.4
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHC--CCeEEEEee
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM--GYAVIFLYR 93 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~--Ga~V~~i~g 93 (292)
.|+||||+| ||-.|..+++.|+++ |++|+.+..
T Consensus 6 ~~~VLVTGa------------------tGfIG~~lv~~Ll~~g~~~~V~~~d~ 40 (668)
T PLN02260 6 PKNILITGA------------------AGFIASHVANRLIRNYPDYKIVVLDK 40 (668)
T ss_pred CCEEEEECC------------------CcHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 399999999 999999999999998 678877765
No 264
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.051 Score=48.26 Aligned_cols=32 Identities=25% Similarity=0.240 Sum_probs=29.6
Q ss_pred eEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 45 ~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
++|||+| ||.+|.++|+.|+++|++|+++.+.
T Consensus 2 ~vlItGa------------------s~giG~~ia~~l~~~g~~v~~~~r~ 33 (223)
T PRK05884 2 EVLVTGG------------------DTDLGRTIAEGFRNDGHKVTLVGAR 33 (223)
T ss_pred eEEEEeC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 6899999 9999999999999999999998764
No 265
>PRK14982 acyl-ACP reductase; Provisional
Probab=94.61 E-value=0.15 Score=49.34 Aligned_cols=36 Identities=22% Similarity=0.290 Sum_probs=30.2
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHC-C-CeEEEEee
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-G-YAVIFLYR 93 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~-G-a~V~~i~g 93 (292)
++.+ |+|+||++ +|.+|..+|+.++.+ | ..|+++.+
T Consensus 152 ~l~~--k~VLVtGA------------------tG~IGs~lar~L~~~~gv~~lilv~R 189 (340)
T PRK14982 152 DLSK--ATVAVVGA------------------TGDIGSAVCRWLDAKTGVAELLLVAR 189 (340)
T ss_pred CcCC--CEEEEEcc------------------ChHHHHHHHHHHHhhCCCCEEEEEcC
Confidence 5655 99999999 999999999999865 5 57777765
No 266
>PLN02214 cinnamoyl-CoA reductase
Probab=94.51 E-value=0.062 Score=51.04 Aligned_cols=34 Identities=26% Similarity=0.371 Sum_probs=31.6
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+++||||+| ||..|.++++.|+++|++|+.+.+.
T Consensus 10 ~~~vlVTGa------------------tGfIG~~l~~~L~~~G~~V~~~~r~ 43 (342)
T PLN02214 10 GKTVCVTGA------------------GGYIASWIVKILLERGYTVKGTVRN 43 (342)
T ss_pred CCEEEEECC------------------CcHHHHHHHHHHHHCcCEEEEEeCC
Confidence 389999999 9999999999999999999998764
No 267
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=94.45 E-value=0.066 Score=48.99 Aligned_cols=23 Identities=26% Similarity=0.446 Sum_probs=21.3
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEe
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLY 92 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~ 92 (292)
||-.|..|+++|.++|++|+++.
T Consensus 6 ~GfiG~~l~~~L~~~g~~v~~~~ 28 (306)
T PLN02725 6 RGLVGSAIVRKLEALGFTNLVLR 28 (306)
T ss_pred CCcccHHHHHHHHhCCCcEEEee
Confidence 99999999999999999988664
No 268
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=94.31 E-value=0.067 Score=55.09 Aligned_cols=35 Identities=26% Similarity=0.440 Sum_probs=32.2
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.+|+||||+| +|.+|.++++.|+++|++|+.+.+.
T Consensus 79 ~gKvVLVTGA------------------TGgIG~aLAr~LLk~G~~Vval~Rn 113 (576)
T PLN03209 79 DEDLAFVAGA------------------TGKVGSRTVRELLKLGFRVRAGVRS 113 (576)
T ss_pred CCCEEEEECC------------------CCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3599999999 9999999999999999999998775
No 269
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.24 E-value=0.077 Score=51.69 Aligned_cols=36 Identities=22% Similarity=0.352 Sum_probs=33.1
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
.+++||||+| ||.+|..++++|+++|++|+.+.+..
T Consensus 59 ~~~kVLVtGa------------------tG~IG~~l~~~Ll~~G~~V~~l~R~~ 94 (390)
T PLN02657 59 KDVTVLVVGA------------------TGYIGKFVVRELVRRGYNVVAVAREK 94 (390)
T ss_pred CCCEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEEech
Confidence 4589999999 99999999999999999999998764
No 270
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=93.99 E-value=0.2 Score=47.81 Aligned_cols=34 Identities=29% Similarity=0.406 Sum_probs=31.4
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
++||||+| .|-.|...+.++++.|++|+.+..-.
T Consensus 1 ~~iLVtGG------------------AGYIGSHtv~~Ll~~G~~vvV~DNL~ 34 (329)
T COG1087 1 MKVLVTGG------------------AGYIGSHTVRQLLKTGHEVVVLDNLS 34 (329)
T ss_pred CeEEEecC------------------cchhHHHHHHHHHHCCCeEEEEecCC
Confidence 47999999 99999999999999999999999753
No 271
>PRK06953 short chain dehydrogenase; Provisional
Probab=93.82 E-value=0.09 Score=46.17 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=30.6
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|++|||+| ||..|.++|+.+++.|++|+++.+.
T Consensus 2 ~~vlvtG~------------------sg~iG~~la~~L~~~G~~v~~~~r~ 34 (222)
T PRK06953 2 KTVLIVGA------------------SRGIGREFVRQYRADGWRVIATARD 34 (222)
T ss_pred ceEEEEcC------------------CCchhHHHHHHHHhCCCEEEEEECC
Confidence 68999999 9999999999999999999998764
No 272
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=93.80 E-value=0.14 Score=48.52 Aligned_cols=30 Identities=27% Similarity=0.458 Sum_probs=25.4
Q ss_pred EEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCe-EEEEee
Q 022803 46 ACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA-VIFLYR 93 (292)
Q Consensus 46 VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~-V~~i~g 93 (292)
||||+| +|..|.+|++.+++.|.. ++++..
T Consensus 1 VLVTGa------------------~GSIGseL~rql~~~~p~~lil~d~ 31 (293)
T PF02719_consen 1 VLVTGA------------------GGSIGSELVRQLLRYGPKKLILFDR 31 (293)
T ss_dssp EEEETT------------------TSHHHHHHHHHHHCCB-SEEEEEES
T ss_pred CEEEcc------------------ccHHHHHHHHHHHhcCCCeEEEeCC
Confidence 799999 999999999999999964 666654
No 273
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=93.59 E-value=0.22 Score=45.09 Aligned_cols=86 Identities=23% Similarity=0.195 Sum_probs=55.8
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCC-CccCCCCCccchhhhhcccccceE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCE-PYCSSLPDDAFLECFEVTEESAVQ 122 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~-P~~~~l~~~~~~~~~~~~~~~~i~ 122 (292)
|.++||+| +-..|.+||..+++.||.|...+...... ..+..|+....-. -..++
T Consensus 15 k~~~vtGg------------------~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~------aF~~D 70 (256)
T KOG1200|consen 15 KVAAVTGG------------------SSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHS------AFSCD 70 (256)
T ss_pred ceeEEecC------------------CchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccc------eeeec
Confidence 89999999 56789999999999999999998765421 2233444200000 01244
Q ss_pred EeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 123 GSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 123 v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
|...+ +-..|++ +.++.++..++++.||.+.
T Consensus 71 VS~a~--------~v~~~l~---e~~k~~g~psvlVncAGIt 101 (256)
T KOG1200|consen 71 VSKAH--------DVQNTLE---EMEKSLGTPSVLVNCAGIT 101 (256)
T ss_pred cCcHH--------HHHHHHH---HHHHhcCCCcEEEEcCccc
Confidence 54331 1133333 3467789999999999985
No 274
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=93.35 E-value=0.13 Score=47.41 Aligned_cols=90 Identities=12% Similarity=0.103 Sum_probs=56.7
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCC----CCccCCCCCccchhhh
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTC----EPYCSSLPDDAFLECF 113 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~----~P~~~~l~~~~~~~~~ 113 (292)
.|.| |++||++=+ +|+ ..++.||+.+.+.||+..|-+-.... .|+...+.. ..
T Consensus 3 ~L~G--K~~lI~Gva-------------n~r---SIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s----~~- 59 (259)
T COG0623 3 LLEG--KRILIMGVA-------------NNR---SIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGS----DL- 59 (259)
T ss_pred ccCC--ceEEEEEec-------------ccc---cHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccC----Ce-
Confidence 3555 999998742 222 25899999999999999988854322 122211110 00
Q ss_pred hcccccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccC
Q 022803 114 EVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSD 165 (292)
Q Consensus 114 ~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsD 165 (292)
...++|... .++...++++-+.++..|.++|+-|-|+
T Consensus 60 ----v~~cDV~~d-----------~~i~~~f~~i~~~~g~lD~lVHsIaFa~ 96 (259)
T COG0623 60 ----VLPCDVTND-----------ESIDALFATIKKKWGKLDGLVHSIAFAP 96 (259)
T ss_pred ----EEecCCCCH-----------HHHHHHHHHHHHhhCcccEEEEEeccCC
Confidence 023445432 3444455555677999999999999887
No 275
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=93.35 E-value=0.29 Score=44.58 Aligned_cols=84 Identities=14% Similarity=0.203 Sum_probs=51.2
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCcc-CCCCCccchhhhhcccccce
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYC-SSLPDDAFLECFEVTEESAV 121 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~-~~l~~~~~~~~~~~~~~~~i 121 (292)
|..||||+| +-..|.++|+.|.+.|-.|++--+.....-.. ...| +.+. .-+
T Consensus 5 gnTiLITGG------------------~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p-----~~~t----~v~ 57 (245)
T COG3967 5 GNTILITGG------------------ASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP-----EIHT----EVC 57 (245)
T ss_pred CcEEEEeCC------------------cchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCc-----chhe----eee
Confidence 489999999 44689999999999999998655542211000 0001 0010 112
Q ss_pred EEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 122 QGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 122 ~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
+|.+. +.-.+|.+++ .+.++.-+++|.+|.+-
T Consensus 58 Dv~d~--------~~~~~lvewL---kk~~P~lNvliNNAGIq 89 (245)
T COG3967 58 DVADR--------DSRRELVEWL---KKEYPNLNVLINNAGIQ 89 (245)
T ss_pred cccch--------hhHHHHHHHH---HhhCCchheeeeccccc
Confidence 33222 1113455554 67789999999999884
No 276
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=93.14 E-value=0.24 Score=59.02 Aligned_cols=25 Identities=16% Similarity=-0.020 Sum_probs=21.9
Q ss_pred ccHHHHHHHHHHHHC-CCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKM-GYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~-Ga~V~~i~g~ 94 (292)
+|..|.++|++|+++ |+.|+++.+.
T Consensus 2006 arGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813 2006 AKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred CCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 778999999999998 6999888764
No 277
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=93.09 E-value=0.35 Score=42.18 Aligned_cols=152 Identities=11% Similarity=0.003 Sum_probs=80.2
Q ss_pred HHHHHHHHhc-CCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCC
Q 022803 26 SQKLKEFIAL-NSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSL 104 (292)
Q Consensus 26 ~~~~~~~l~~-~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l 104 (292)
+..+.+.+.. ..++++ ++++|.+| +|.+|.++|+.|+..|++|+++.+.....
T Consensus 12 v~~~~~~l~~~~~~l~~--~~vlVlGg------------------tG~iG~~~a~~l~~~g~~V~l~~R~~~~~------ 65 (194)
T cd01078 12 VAAAGKALELMGKDLKG--KTAVVLGG------------------TGPVGQRAAVLLAREGARVVLVGRDLERA------ 65 (194)
T ss_pred HHHHHHHHHHhCcCCCC--CEEEEECC------------------CCHHHHHHHHHHHHCCCEEEEEcCCHHHH------
Confidence 3344444432 225655 99999999 99999999999999999999987642100
Q ss_pred CCccchhhhhcccccceEEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCcCCccccccccccCCCCC
Q 022803 105 PDDAFLECFEVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGP 184 (292)
Q Consensus 105 ~~~~~~~~~~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~v~~~~~~~~KI~s~~~~ 184 (292)
. ...+.+. ......+... ...++.++.+. +..+|++|.+.+...+.+ .. .+...+. ..
T Consensus 66 ~--~l~~~l~--~~~~~~~~~~------~~~~~~~~~~~-------~~~~diVi~at~~g~~~~-~~--~~~~~~~--~~ 123 (194)
T cd01078 66 Q--KAADSLR--ARFGEGVGAV------ETSDDAARAAA-------IKGADVVFAAGAAGVELL-EK--LAWAPKP--LA 123 (194)
T ss_pred H--HHHHHHH--hhcCCcEEEe------eCCCHHHHHHH-------HhcCCEEEECCCCCceec-hh--hhcccCc--ee
Confidence 0 0111010 0001111100 01122333332 356799888877766522 11 1212211 34
Q ss_pred ceEEEEeCcchhHHHhhccCC-----CeEEEEEeeccCcHHHHHHH
Q 022803 185 LDMQLLQVPKMLSVLRKEWAP-----MAFCISFKLETDAEILLEKA 225 (292)
Q Consensus 185 l~l~L~~~PkIl~~i~~~~~p-----~~~lVgFklEt~~e~l~~~A 225 (292)
+.+.+..+|++=..+.+...+ ....+|...-.+..-...+|
T Consensus 124 vv~D~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~g~~~~~~~~ 169 (194)
T cd01078 124 VAADVNAVPPVGIEGIDVPDKGVDREGKVPYGAIGVGGLKMKTHRA 169 (194)
T ss_pred EEEEccCCCCCCcccccccCCceecCCCeEEEeeccchhHHHHHHH
Confidence 678888889887666543222 12345665554433334444
No 278
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=93.06 E-value=0.13 Score=47.00 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=30.6
Q ss_pred eEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 45 ~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
+||||+| ||..|..++++|+++|++|+.+.+..
T Consensus 1 ~ilVtGa------------------tG~iG~~vv~~L~~~g~~V~~~~R~~ 33 (285)
T TIGR03649 1 TILLTGG------------------TGKTASRIARLLQAASVPFLVASRSS 33 (285)
T ss_pred CEEEEcC------------------CChHHHHHHHHHHhCCCcEEEEeCCC
Confidence 4899999 99999999999999999999999864
No 279
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.78 E-value=1 Score=42.64 Aligned_cols=54 Identities=22% Similarity=0.183 Sum_probs=42.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..|.+.+..+ +-++.| |+|+|.+. |+-.|.-+|..|..+||.|+.+|+.
T Consensus 138 ~PcTp~ai~~ll~~~---~i~l~G--k~vvVIGr------------------s~~VG~pla~lL~~~gatVtv~~s~ 191 (286)
T PRK14175 138 VPCTPLGIMEILKHA---DIDLEG--KNAVVIGR------------------SHIVGQPVSKLLLQKNASVTILHSR 191 (286)
T ss_pred CCCcHHHHHHHHHHc---CCCCCC--CEEEEECC------------------CchhHHHHHHHHHHCCCeEEEEeCC
Confidence 566677666544432 235755 99999999 8889999999999999999999974
No 280
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=92.41 E-value=0.5 Score=45.13 Aligned_cols=118 Identities=16% Similarity=0.135 Sum_probs=68.0
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCC-CccCCCCCccchhhhhcccccc
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCE-PYCSSLPDDAFLECFEVTEESA 120 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~-P~~~~l~~~~~~~~~~~~~~~~ 120 (292)
.|+=++||++ |.+.|.+.|++|++||..|.||.+.-+-. -... ...+ -++
T Consensus 48 ~g~WAVVTGa------------------TDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~k-----EI~~------~~~ 98 (312)
T KOG1014|consen 48 LGSWAVVTGA------------------TDGIGKAYARELAKRGFNVVLISRTQEKLEAVAK-----EIEE------KYK 98 (312)
T ss_pred cCCEEEEECC------------------CCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHH------HhC
Confidence 3478999998 89999999999999999999999863310 0000 0011 112
Q ss_pred eEE----eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCcCCccccccccccCCCCCceEEEEeCcchh
Q 022803 121 VQG----SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDMQLLQVPKML 196 (292)
Q Consensus 121 i~v----~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~v~~~~~~~~KI~s~~~~l~l~L~~~PkIl 196 (292)
++| .+... .+. +|+.+++. ++ ..+..++|.++..+=.+| +...+-....-.+-+++++.++.++-
T Consensus 99 vev~~i~~Dft~---~~~-~ye~i~~~----l~-~~~VgILVNNvG~~~~~P--~~f~~~~~~~~~~ii~vN~~~~~~~t 167 (312)
T KOG1014|consen 99 VEVRIIAIDFTK---GDE-VYEKLLEK----LA-GLDVGILVNNVGMSYDYP--ESFLKYPEGELQNIINVNILSVTLLT 167 (312)
T ss_pred cEEEEEEEecCC---Cch-hHHHHHHH----hc-CCceEEEEecccccCCCc--HHHHhCchhhhhheeEEecchHHHHH
Confidence 222 11110 111 35555443 33 235568899999987563 33222221122345788888877765
Q ss_pred HHH
Q 022803 197 SVL 199 (292)
Q Consensus 197 ~~i 199 (292)
+.+
T Consensus 168 ~~i 170 (312)
T KOG1014|consen 168 QLI 170 (312)
T ss_pred HHh
Confidence 544
No 281
>PLN02996 fatty acyl-CoA reductase
Probab=91.83 E-value=0.3 Score=49.24 Aligned_cols=35 Identities=17% Similarity=0.298 Sum_probs=28.8
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCe---EEEEeeCC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA---VIFLYRRG 95 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~---V~~i~g~~ 95 (292)
+|.||||+| ||-+|..+++.+++.+.+ |.++.++.
T Consensus 11 ~k~VlvTGa------------------TGFlG~~ll~~LL~~~~~v~~I~~LvR~~ 48 (491)
T PLN02996 11 NKTILVTGA------------------TGFLAKIFVEKILRVQPNVKKLYLLLRAS 48 (491)
T ss_pred CCeEEEeCC------------------CcHHHHHHHHHHHhhCCCCCEEEEEEeCC
Confidence 399999999 999999999999988754 45556543
No 282
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=91.66 E-value=0.35 Score=43.29 Aligned_cols=28 Identities=25% Similarity=0.338 Sum_probs=25.7
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCCCC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRGTC 97 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~~~ 97 (292)
||+-|..|++++..||++||-|.+..+-
T Consensus 9 sG~~Gs~i~~EA~~RGHeVTAivRn~~K 36 (211)
T COG2910 9 SGKAGSRILKEALKRGHEVTAIVRNASK 36 (211)
T ss_pred CchhHHHHHHHHHhCCCeeEEEEeChHh
Confidence 9999999999999999999999987553
No 283
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=91.58 E-value=0.13 Score=41.69 Aligned_cols=35 Identities=20% Similarity=0.090 Sum_probs=29.0
Q ss_pred EEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 46 ACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 46 VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|||+++||.-.+= | ..+||+++.++||+|++...+
T Consensus 1 Ili~~~Gt~Ghv~--P------------~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 1 ILIATGGTRGHVY--P------------FLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEEESSHHHHH--H------------HHHHHHHHHHTT-EEEEEETG
T ss_pred CEEEEcCChhHHH--H------------HHHHHHHHhccCCeEEEeecc
Confidence 6888888888886 2 889999999999999977764
No 284
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=91.03 E-value=0.23 Score=47.71 Aligned_cols=39 Identities=13% Similarity=0.166 Sum_probs=34.7
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~ 96 (292)
|+|+||+|||=-+|= -|.++|+++.++||+|.|+.+...
T Consensus 2 ~~i~~~~GGTGGHi~--------------Pala~a~~l~~~g~~v~~vg~~~~ 40 (352)
T PRK12446 2 KKIVFTGGGSAGHVT--------------PNLAIIPYLKEDNWDISYIGSHQG 40 (352)
T ss_pred CeEEEEcCCcHHHHH--------------HHHHHHHHHHhCCCEEEEEECCCc
Confidence 689999999998886 399999999999999999987654
No 285
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.95 E-value=1.2 Score=42.40 Aligned_cols=54 Identities=17% Similarity=0.152 Sum_probs=42.5
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+-+..+ +.++.| |+|.|-+. ||.||..+|..++++||.|+++|+.
T Consensus 139 ~PcTp~aii~lL~~~---~i~l~G--k~V~vIG~------------------s~ivG~PmA~~L~~~gatVtv~~~~ 192 (301)
T PRK14194 139 TPCTPSGCLRLLEDT---CGDLTG--KHAVVIGR------------------SNIVGKPMAALLLQAHCSVTVVHSR 192 (301)
T ss_pred CCCcHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CCccHHHHHHHHHHCCCEEEEECCC
Confidence 566777666544433 236765 99999877 8899999999999999999999875
No 286
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=90.73 E-value=1.1 Score=43.78 Aligned_cols=34 Identities=21% Similarity=0.288 Sum_probs=30.8
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCC--CeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG--YAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~G--a~V~~i~g~ 94 (292)
+.++|||+| +|..|..+++++.++| .+|.+++-.
T Consensus 4 ~~~vlVtGG------------------~GflG~hlv~~L~~~~~~~~irv~D~~ 39 (361)
T KOG1430|consen 4 KLSVLVTGG------------------SGFLGQHLVQALLENELKLEIRVVDKT 39 (361)
T ss_pred CCEEEEECC------------------ccHHHHHHHHHHHhcccccEEEEeccC
Confidence 389999999 9999999999999999 888888753
No 287
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=90.24 E-value=1.2 Score=39.64 Aligned_cols=85 Identities=20% Similarity=0.140 Sum_probs=54.7
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEE
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQG 123 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v 123 (292)
.+.|||+| .-..|.+-||.++..|+.|.++.=|.|- +.+.-.. -..++-+
T Consensus 10 lvalvtgg------------------asglg~ataerlakqgasv~lldlp~sk-----------g~~vake-lg~~~vf 59 (260)
T KOG1199|consen 10 LVALVTGG------------------ASGLGKATAERLAKQGASVALLDLPQSK-----------GADVAKE-LGGKVVF 59 (260)
T ss_pred eeEEeecC------------------cccccHHHHHHHHhcCceEEEEeCCccc-----------chHHHHH-hCCceEE
Confidence 89999999 3357999999999999999999876542 1111000 0112212
Q ss_pred eecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeeccc
Q 022803 124 SSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVS 164 (292)
Q Consensus 124 ~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVs 164 (292)
.+..- | .-.+...++......+++-|+.+.||.++
T Consensus 60 ~padv---t---sekdv~aala~ak~kfgrld~~vncagia 94 (260)
T KOG1199|consen 60 TPADV---T---SEKDVRAALAKAKAKFGRLDALVNCAGIA 94 (260)
T ss_pred ecccc---C---cHHHHHHHHHHHHhhccceeeeeecccee
Confidence 11100 1 11455566666667799999999999876
No 288
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=89.64 E-value=9.1 Score=35.49 Aligned_cols=25 Identities=20% Similarity=0.340 Sum_probs=22.1
Q ss_pred ccHHHHHHHHHHHHCC-CeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMG-YAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~G-a~V~~i~g~ 94 (292)
+|.+|.++|.++..+| .+|+++.+.
T Consensus 131 aGg~a~ai~~aL~~~g~~~V~v~~R~ 156 (278)
T PRK00258 131 AGGAARAVILPLLDLGVAEITIVNRT 156 (278)
T ss_pred CcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 6899999999999999 788888764
No 289
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.55 E-value=4.2 Score=38.52 Aligned_cols=53 Identities=13% Similarity=0.137 Sum_probs=42.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEee
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
.|..|..+.+.+..+ +-++.| |+|+|-++ |..-|.-+|.-|..+||.|+..|.
T Consensus 137 ~PcTp~avi~lL~~~---~i~l~G--k~vvVvGr------------------s~~VG~Pla~lL~~~gAtVtv~hs 189 (285)
T PRK14191 137 VPATPMGVMRLLKHY---HIEIKG--KDVVIIGA------------------SNIVGKPLAMLMLNAGASVSVCHI 189 (285)
T ss_pred CCCcHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CchhHHHHHHHHHHCCCEEEEEeC
Confidence 466777776544432 236765 99999999 888899999999999999999885
No 290
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=89.44 E-value=0.53 Score=43.66 Aligned_cols=33 Identities=30% Similarity=0.372 Sum_probs=29.3
Q ss_pred eEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCC--CeEEEEeeCC
Q 022803 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG--YAVIFLYRRG 95 (292)
Q Consensus 45 ~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~G--a~V~~i~g~~ 95 (292)
+||||+| ||..|.++++.|+++| +.|+.+.+..
T Consensus 1 ~vlvtGa------------------tG~lG~~l~~~L~~~g~~~~V~~l~R~~ 35 (367)
T TIGR01746 1 TVLLTGA------------------TGFLGAYLLEELLRRSTQAKVICLVRAA 35 (367)
T ss_pred CEEEecc------------------chHHHHHHHHHHHhCCCCCEEEEEEccC
Confidence 5899999 9999999999999999 7798887753
No 291
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=89.37 E-value=0.86 Score=40.67 Aligned_cols=88 Identities=18% Similarity=0.100 Sum_probs=55.9
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhccc
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTE 117 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~ 117 (292)
+|.| ++|++|+- --..|.+++..++..||.|+-+.+.... ...+... .
T Consensus 4 ~laG--~~vlvTga------------------gaGIG~~~v~~La~aGA~ViAvaR~~a~-----------L~sLV~e-~ 51 (245)
T KOG1207|consen 4 SLAG--VIVLVTGA------------------GAGIGKEIVLSLAKAGAQVIAVARNEAN-----------LLSLVKE-T 51 (245)
T ss_pred cccc--eEEEeecc------------------cccccHHHHHHHHhcCCEEEEEecCHHH-----------HHHHHhh-C
Confidence 4555 99999975 3357999999999999999999986321 1111110 0
Q ss_pred ccce-EEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCcC
Q 022803 118 ESAV-QGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFYV 168 (292)
Q Consensus 118 ~~~i-~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~v 168 (292)
...| .+.- . ..-.+++.+.+-.....|.++.+|+|+=-.+
T Consensus 52 p~~I~Pi~~-------D----ls~wea~~~~l~~v~pidgLVNNAgvA~~~p 92 (245)
T KOG1207|consen 52 PSLIIPIVG-------D----LSAWEALFKLLVPVFPIDGLVNNAGVATNHP 92 (245)
T ss_pred CcceeeeEe-------c----ccHHHHHHHhhcccCchhhhhccchhhhcch
Confidence 1112 1111 1 1124455555666788899999999987763
No 292
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.32 E-value=1.7 Score=41.24 Aligned_cols=54 Identities=19% Similarity=0.101 Sum_probs=42.3
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..|.+.+..+ +.++.| |+|+|-+. ||.||..+|..++++||.|+.+|..
T Consensus 138 ~PcTp~ai~~ll~~~---~i~~~G--k~V~viGr------------------s~~mG~PmA~~L~~~g~tVtv~~~r 191 (296)
T PRK14188 138 VPCTPLGCMMLLRRV---HGDLSG--LNAVVIGR------------------SNLVGKPMAQLLLAANATVTIAHSR 191 (296)
T ss_pred cCCCHHHHHHHHHHh---CCCCCC--CEEEEEcC------------------CcchHHHHHHHHHhCCCEEEEECCC
Confidence 566777776544432 235765 99999887 9999999999999999999999754
No 293
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=89.16 E-value=0.57 Score=41.51 Aligned_cols=26 Identities=27% Similarity=0.512 Sum_probs=24.9
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
||..|..++++++..|+.|..+.++.
T Consensus 7 tG~~G~~v~~~L~~~~~~V~~l~R~~ 32 (233)
T PF05368_consen 7 TGNQGRSVVRALLSAGFSVRALVRDP 32 (233)
T ss_dssp TSHHHHHHHHHHHHTTGCEEEEESSS
T ss_pred ccHHHHHHHHHHHhCCCCcEEEEecc
Confidence 99999999999999999999999974
No 294
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=89.12 E-value=0.59 Score=41.74 Aligned_cols=35 Identities=26% Similarity=0.242 Sum_probs=32.0
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~ 96 (292)
++||||+| ||..|.+++++++.+|++|..+.+...
T Consensus 1 ~~ilV~Ga------------------tG~~G~~~~~~L~~~~~~v~~~~r~~~ 35 (275)
T COG0702 1 MKILVTGA------------------TGFVGGAVVRELLARGHEVRAAVRNPE 35 (275)
T ss_pred CeEEEEec------------------ccchHHHHHHHHHhCCCEEEEEEeCHH
Confidence 47999999 999999999999999999999998743
No 295
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=88.78 E-value=2.2 Score=37.88 Aligned_cols=35 Identities=29% Similarity=0.369 Sum_probs=29.4
Q ss_pred CCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEe
Q 022803 37 SSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 92 (292)
Q Consensus 37 ~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~ 92 (292)
.+++| |+|+|++. |++|..+|+.|.+.|++|+...
T Consensus 24 ~~l~g--k~v~I~G~-------------------G~vG~~~A~~L~~~G~~Vvv~D 58 (200)
T cd01075 24 DSLEG--KTVAVQGL-------------------GKVGYKLAEHLLEEGAKLIVAD 58 (200)
T ss_pred CCCCC--CEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEc
Confidence 46765 99998875 7999999999999999999544
No 296
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=88.47 E-value=0.82 Score=39.14 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=30.1
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEe
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 92 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~ 92 (292)
++.| ++|||-+| |+.|...|+.|++.|++|++|.
T Consensus 10 ~l~~--~~vlVvGG-------------------G~va~rka~~Ll~~ga~V~VIs 43 (157)
T PRK06719 10 NLHN--KVVVIIGG-------------------GKIAYRKASGLKDTGAFVTVVS 43 (157)
T ss_pred EcCC--CEEEEECC-------------------CHHHHHHHHHHHhCCCEEEEEc
Confidence 4555 99999988 7889999999999999999994
No 297
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=87.85 E-value=0.9 Score=40.48 Aligned_cols=35 Identities=17% Similarity=0.324 Sum_probs=30.7
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEee
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
++.| |+|||-+| |.+|...|+.|+..|++|++|..
T Consensus 7 ~l~~--k~vLVIGg-------------------G~va~~ka~~Ll~~ga~V~VIs~ 41 (202)
T PRK06718 7 DLSN--KRVVIVGG-------------------GKVAGRRAITLLKYGAHIVVISP 41 (202)
T ss_pred EcCC--CEEEEECC-------------------CHHHHHHHHHHHHCCCeEEEEcC
Confidence 4555 99999988 78999999999999999999974
No 298
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=87.84 E-value=4 Score=38.68 Aligned_cols=54 Identities=15% Similarity=0.118 Sum_probs=42.4
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..|.+.+..+ +-++.| |+|+|.+. |..-|.-+|..|..+||.||..|..
T Consensus 144 ~PcTp~av~~ll~~~---~i~l~G--k~vvViGr------------------s~iVGkPla~lL~~~~atVtv~hs~ 197 (287)
T PRK14176 144 VPCTPHGVIRALEEY---GVDIEG--KNAVIVGH------------------SNVVGKPMAAMLLNRNATVSVCHVF 197 (287)
T ss_pred CCCcHHHHHHHHHHc---CCCCCC--CEEEEECC------------------CcccHHHHHHHHHHCCCEEEEEecc
Confidence 566777766544432 235755 99999988 7888999999999999999999964
No 299
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=87.71 E-value=2.2 Score=36.89 Aligned_cols=53 Identities=19% Similarity=0.129 Sum_probs=35.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 19 LNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 19 ~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|..|..+.+-+.. . .-++.| |+|+|-+. |+--|.-+|.-|.++||.|+..|..
T Consensus 17 PcTp~aii~lL~~-~--~~~l~G--k~v~VvGr------------------s~~VG~Pla~lL~~~~atVt~~h~~ 69 (160)
T PF02882_consen 17 PCTPLAIIELLEY-Y--GIDLEG--KKVVVVGR------------------SNIVGKPLAMLLLNKGATVTICHSK 69 (160)
T ss_dssp -HHHHHHHHHHHH-T--T-STTT---EEEEE-T------------------TTTTHHHHHHHHHHTT-EEEEE-TT
T ss_pred CCCHHHHHHHHHh-c--CCCCCC--CEEEEECC------------------cCCCChHHHHHHHhCCCeEEeccCC
Confidence 3345545443332 1 235755 99999998 8888999999999999999999975
No 300
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]
Probab=87.61 E-value=1.4 Score=44.32 Aligned_cols=54 Identities=17% Similarity=0.241 Sum_probs=46.1
Q ss_pred ceEEEecCCccc-----ccCCCceeeeecCC---------------ccHHHHHHHHHHHHCCCeEEEEeeCCCCCC
Q 022803 44 RVACVTSGGTTV-----PLEQRCVRYIDNFS---------------SGHRGAASTEHLIKMGYAVIFLYRRGTCEP 99 (292)
Q Consensus 44 k~VLITaG~T~E-----~ID~~~VR~ItN~S---------------SG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P 99 (292)
++|+|.+|...- .+| ..|+++|.. .|-.|.++|..|.+.|.+||+|.+.....|
T Consensus 137 ~~iiIATGS~p~~~~~~~~~--~~~~~~s~~~l~~~~lP~~lvIiGgG~IGlE~a~~~~~LG~~VTiie~~~~iLp 210 (454)
T COG1249 137 DNIIIATGSRPRIPPGPGID--GARILDSSDALFLLELPKSLVIVGGGYIGLEFASVFAALGSKVTVVERGDRILP 210 (454)
T ss_pred CEEEEcCCCCCcCCCCCCCC--CCeEEechhhcccccCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCCCC
Confidence 778998887754 477 899999865 799999999999999999999998776666
No 301
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=87.44 E-value=0.95 Score=44.47 Aligned_cols=33 Identities=27% Similarity=0.355 Sum_probs=28.9
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|+|+|++| |+.|.++|+.|+++||+|+++...
T Consensus 5 ~k~v~iiG~-------------------g~~G~~~A~~l~~~G~~V~~~d~~ 37 (450)
T PRK14106 5 GKKVLVVGA-------------------GVSGLALAKFLKKLGAKVILTDEK 37 (450)
T ss_pred CCEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 399999976 458999999999999999998864
No 302
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=87.40 E-value=1.3 Score=42.42 Aligned_cols=34 Identities=15% Similarity=-0.002 Sum_probs=28.5
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCC-------CeEEEEeeCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG-------YAVIFLYRRG 95 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~G-------a~V~~i~g~~ 95 (292)
-+|+||+. +|..|.++|..+..+| .+|.++..+.
T Consensus 3 ~kV~I~GA------------------aG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~ 43 (325)
T cd01336 3 IRVLVTGA------------------AGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP 43 (325)
T ss_pred eEEEEECC------------------CCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC
Confidence 57888888 9999999999998844 6899998753
No 303
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=87.37 E-value=2.1 Score=37.25 Aligned_cols=52 Identities=17% Similarity=0.155 Sum_probs=36.8
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHH-HHHHHHHHHHCCCeEEEEeeC
Q 022803 19 LNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHR-GAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 19 ~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~-G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|.-+..+++.+++.+ .++.| |+|||.+. |.| |..+|+.|.++|+.|+++++.
T Consensus 25 p~~~~a~v~l~~~~~---~~l~g--k~vlViG~-------------------G~~~G~~~a~~L~~~g~~V~v~~r~ 77 (168)
T cd01080 25 PCTPAGILELLKRYG---IDLAG--KKVVVVGR-------------------SNIVGKPLAALLLNRNATVTVCHSK 77 (168)
T ss_pred CChHHHHHHHHHHcC---CCCCC--CEEEEECC-------------------cHHHHHHHHHHHhhCCCEEEEEECC
Confidence 334444454444443 25755 99999876 565 888999999999999888864
No 304
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=87.37 E-value=0.7 Score=43.66 Aligned_cols=26 Identities=42% Similarity=0.416 Sum_probs=24.8
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
||-+|.+|...+.+.|++|+.+.+..
T Consensus 7 TGlIG~~L~~~L~~~gh~v~iltR~~ 32 (297)
T COG1090 7 TGLIGRALTARLRKGGHQVTILTRRP 32 (297)
T ss_pred ccchhHHHHHHHHhCCCeEEEEEcCC
Confidence 99999999999999999999999864
No 305
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=87.33 E-value=2.7 Score=40.11 Aligned_cols=37 Identities=32% Similarity=0.463 Sum_probs=33.5
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTC 97 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~ 97 (292)
+|++|||+= ||+=|+-||+-++++||+|.=+.++.+.
T Consensus 2 ~K~ALITGI------------------TGQDGsYLa~lLLekGY~VhGi~Rrss~ 38 (345)
T COG1089 2 GKVALITGI------------------TGQDGSYLAELLLEKGYEVHGIKRRSSS 38 (345)
T ss_pred CceEEEecc------------------cCCchHHHHHHHHhcCcEEEEEeecccc
Confidence 489999987 9999999999999999999999988653
No 306
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=87.31 E-value=0.67 Score=44.64 Aligned_cols=34 Identities=29% Similarity=0.461 Sum_probs=31.8
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+++||||+| .|-.|.+-+-+++++||.|+.|..-
T Consensus 2 ~~~VLVtGg------------------aGyiGsht~l~L~~~gy~v~~vDNl 35 (343)
T KOG1371|consen 2 GKHVLVTGG------------------AGYIGSHTVLALLKRGYGVVIVDNL 35 (343)
T ss_pred CcEEEEecC------------------CcceehHHHHHHHhCCCcEEEEecc
Confidence 489999999 9999999999999999999999864
No 307
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=87.12 E-value=1.1 Score=40.37 Aligned_cols=26 Identities=23% Similarity=0.331 Sum_probs=22.1
Q ss_pred ccHHHHHHHHHHHHCCC--eEEEEeeCC
Q 022803 70 SGHRGAASTEHLIKMGY--AVIFLYRRG 95 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga--~V~~i~g~~ 95 (292)
||-.|..|.+.+++.+. .|+++.+..
T Consensus 5 TGflG~~ll~~Ll~~~~~~~I~cLvR~~ 32 (249)
T PF07993_consen 5 TGFLGSHLLEELLRQPPDVKIYCLVRAS 32 (249)
T ss_dssp TSHHHHHHHHHHHHHS-TTEEEEEE-SS
T ss_pred CcHHHHHHHHHHHcCCCCcEEEEEEeCc
Confidence 99999999999999987 898888864
No 308
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=87.12 E-value=2.2 Score=40.34 Aligned_cols=61 Identities=21% Similarity=0.284 Sum_probs=45.1
Q ss_pred hhhccCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeE
Q 022803 11 SFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAV 88 (292)
Q Consensus 11 ~~~~~~~--~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V 88 (292)
.+|.+.. .|..|..+.+-+..+ +-++.| |+|+|-+. ||.||.-+|..++++||.|
T Consensus 129 ~l~~~~~~~~PcTp~avi~lL~~~---~i~l~G--k~v~vIG~------------------S~ivG~Pla~lL~~~gatV 185 (284)
T PRK14179 129 HLWSGRPVMIPCTPAGIMEMFREY---NVELEG--KHAVVIGR------------------SNIVGKPMAQLLLDKNATV 185 (284)
T ss_pred HHhCCCCCCcCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CCcCcHHHHHHHHHCCCEE
Confidence 3444433 566787766544432 235765 99999888 9999999999999999999
Q ss_pred EEEeeC
Q 022803 89 IFLYRR 94 (292)
Q Consensus 89 ~~i~g~ 94 (292)
+..|..
T Consensus 186 tv~~s~ 191 (284)
T PRK14179 186 TLTHSR 191 (284)
T ss_pred EEECCC
Confidence 998643
No 309
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=86.54 E-value=6.5 Score=37.45 Aligned_cols=54 Identities=19% Similarity=0.109 Sum_probs=42.2
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..|.+.+..+ +-++.| |+|+|-+. |.--|.-+|.-|.++||.||..|..
T Consensus 138 ~PcTp~aii~lL~~~---~i~l~G--k~vvVIGr------------------S~iVGkPla~lL~~~~atVtv~hs~ 191 (297)
T PRK14186 138 RSCTPAGVMRLLRSQ---QIDIAG--KKAVVVGR------------------SILVGKPLALMLLAANATVTIAHSR 191 (297)
T ss_pred CCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CccchHHHHHHHHHCCCEEEEeCCC
Confidence 566677666544332 236755 99999988 8888999999999999999999975
No 310
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=86.45 E-value=6.2 Score=37.29 Aligned_cols=61 Identities=15% Similarity=0.152 Sum_probs=44.2
Q ss_pred hhhccCC--CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeE
Q 022803 11 SFFDSAP--PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAV 88 (292)
Q Consensus 11 ~~~~~~~--~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V 88 (292)
++|.+.. .|..|..+.+-+..+ +-++.| |+|+|-+. |..-|.-+|..|.++||.|
T Consensus 128 ~l~~g~~~~~PcTp~avi~lL~~~---~i~l~G--k~vvViGr------------------S~~VG~Pla~lL~~~~AtV 184 (281)
T PRK14183 128 RLVTGLDGFVPCTPLGVMELLEEY---EIDVKG--KDVCVVGA------------------SNIVGKPMAALLLNANATV 184 (281)
T ss_pred HHhcCCCCCCCCcHHHHHHHHHHc---CCCCCC--CEEEEECC------------------CCcchHHHHHHHHHCCCEE
Confidence 3444433 466677666444322 236766 99999999 7888999999999999999
Q ss_pred EEEeeC
Q 022803 89 IFLYRR 94 (292)
Q Consensus 89 ~~i~g~ 94 (292)
|+.|..
T Consensus 185 ti~hs~ 190 (281)
T PRK14183 185 DICHIF 190 (281)
T ss_pred EEeCCC
Confidence 988753
No 311
>PRK06849 hypothetical protein; Provisional
Probab=86.42 E-value=1.3 Score=42.96 Aligned_cols=34 Identities=12% Similarity=0.132 Sum_probs=29.9
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|+||||+| +...|..+|++|.++|++|+++...
T Consensus 4 ~~~VLI~G~------------------~~~~~l~iar~l~~~G~~Vi~~d~~ 37 (389)
T PRK06849 4 KKTVLITGA------------------RAPAALELARLFHNAGHTVILADSL 37 (389)
T ss_pred CCEEEEeCC------------------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 499999999 4556999999999999999999764
No 312
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=86.28 E-value=7 Score=36.99 Aligned_cols=54 Identities=20% Similarity=0.156 Sum_probs=42.7
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+-+..+ +.++.| |+|+|-+. |+.-|.-+|.-|..+||.||..|..
T Consensus 139 ~PcTp~avi~ll~~y---~i~l~G--k~vvViGr------------------S~iVGkPla~lL~~~~atVt~chs~ 192 (284)
T PRK14177 139 LPCTPYGMVLLLKEY---GIDVTG--KNAVVVGR------------------SPILGKPMAMLLTEMNATVTLCHSK 192 (284)
T ss_pred CCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CCcchHHHHHHHHHCCCEEEEeCCC
Confidence 566777776544432 236766 99999988 8888999999999999999999964
No 313
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=86.24 E-value=0.88 Score=35.93 Aligned_cols=36 Identities=22% Similarity=0.314 Sum_probs=29.5
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+++| ++|||.+| |..|..=++.|++.||+|++++..
T Consensus 4 ~l~~--~~vlVvGg-------------------G~va~~k~~~Ll~~gA~v~vis~~ 39 (103)
T PF13241_consen 4 DLKG--KRVLVVGG-------------------GPVAARKARLLLEAGAKVTVISPE 39 (103)
T ss_dssp --TT---EEEEEEE-------------------SHHHHHHHHHHCCCTBEEEEEESS
T ss_pred EcCC--CEEEEECC-------------------CHHHHHHHHHHHhCCCEEEEECCc
Confidence 3544 99999887 788999999999999999999975
No 314
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=86.13 E-value=5.8 Score=37.54 Aligned_cols=54 Identities=20% Similarity=0.169 Sum_probs=42.2
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+.+..+ +-++.| |+|+|-+. |..-|.-+|.-|.++||.||..|..
T Consensus 137 ~PcTp~avi~lL~~~---~i~l~G--k~vvVvGr------------------S~iVGkPla~lL~~~~atVtichs~ 190 (284)
T PRK14170 137 VPCTPAGIIELIKST---GTQIEG--KRAVVIGR------------------SNIVGKPVAQLLLNENATVTIAHSR 190 (284)
T ss_pred CCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CCcchHHHHHHHHHCCCEEEEeCCC
Confidence 566777666544322 236755 99999988 8888999999999999999999975
No 315
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=85.79 E-value=6.1 Score=37.46 Aligned_cols=54 Identities=17% Similarity=0.191 Sum_probs=42.2
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+.+..+ +-++.| |+|+|-+. |+.-|.-+|.-|..+||.||..|..
T Consensus 135 ~PcTp~avi~lL~~~---~i~l~G--k~vvViGr------------------S~iVGkPla~lL~~~~aTVtichs~ 188 (287)
T PRK14173 135 EPCTPAGVVRLLKHY---GIPLAG--KEVVVVGR------------------SNIVGKPLAALLLREDATVTLAHSK 188 (287)
T ss_pred CCCCHHHHHHHHHHc---CCCCCC--CEEEEECC------------------CCccHHHHHHHHHHCCCEEEEeCCC
Confidence 566777666544432 236765 99999888 8888999999999999999999975
No 316
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=85.63 E-value=7.8 Score=36.63 Aligned_cols=54 Identities=11% Similarity=0.141 Sum_probs=42.5
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+-+..+ +-++.| |+|+|-+. |..-|.-+|.-|..+||.||..|..
T Consensus 136 ~PcTp~avi~lL~~~---~i~l~G--k~vvViGr------------------S~iVGkPla~lL~~~~atVtichs~ 189 (282)
T PRK14169 136 VASTPYGIMALLDAY---DIDVAG--KRVVIVGR------------------SNIVGRPLAGLMVNHDATVTIAHSK 189 (282)
T ss_pred CCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CccchHHHHHHHHHCCCEEEEECCC
Confidence 566777776544433 236755 99999888 8888999999999999999999865
No 317
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=85.02 E-value=7.2 Score=36.86 Aligned_cols=54 Identities=20% Similarity=0.186 Sum_probs=43.2
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+-+..+ +-++.| |+|+|-+. |..-|.-+|.-|.++||.||..|..
T Consensus 138 ~PcTp~aii~lL~~y---~i~l~G--k~vvViGr------------------S~~VGkPla~lL~~~~ATVt~chs~ 191 (282)
T PRK14180 138 ESCTPKGIMTMLREY---GIKTEG--AYAVVVGA------------------SNVVGKPVSQLLLNAKATVTTCHRF 191 (282)
T ss_pred CCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CCcchHHHHHHHHHCCCEEEEEcCC
Confidence 566788777555433 236765 99999998 8888999999999999999999974
No 318
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=84.94 E-value=6.8 Score=37.04 Aligned_cols=54 Identities=17% Similarity=0.171 Sum_probs=42.8
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+-+..+ +-++.| |+|+|-+. |..-|.-+|.-|.++||.||..|..
T Consensus 137 ~PcTp~avi~lL~~y---~i~l~G--k~vvVvGr------------------S~iVGkPla~lL~~~~atVt~chs~ 190 (282)
T PRK14166 137 LPCTPLGVMKLLKAY---EIDLEG--KDAVIIGA------------------SNIVGRPMATMLLNAGATVSVCHIK 190 (282)
T ss_pred cCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CCcchHHHHHHHHHCCCEEEEeCCC
Confidence 577788777555433 236766 99999888 7888999999999999999999974
No 319
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=84.80 E-value=3.3 Score=30.70 Aligned_cols=28 Identities=25% Similarity=0.372 Sum_probs=24.6
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCCCC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRGTC 97 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~~~ 97 (292)
.|-.|..+|.++..+|.+|++|++....
T Consensus 7 gG~ig~E~A~~l~~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 7 GGFIGIELAEALAELGKEVTLIERSDRL 34 (80)
T ss_dssp SSHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred cCHHHHHHHHHHHHhCcEEEEEeccchh
Confidence 4788999999999999999999986543
No 320
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=84.56 E-value=14 Score=33.14 Aligned_cols=57 Identities=18% Similarity=0.109 Sum_probs=43.4
Q ss_pred CCCCHHHHHHHHHHHHhc-------CCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEE
Q 022803 18 PLNDRAAISQKLKEFIAL-------NSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIF 90 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~-------~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~ 90 (292)
.|..|..+.+.++.+ .- +.++.| |+|+|-+. |.--|.-+|.-|.++||.|+.
T Consensus 33 ~PCTp~avi~lL~~~-~i~~~~~~~~~~l~G--K~vvVIGr------------------S~iVGkPla~lL~~~~AtVti 91 (197)
T cd01079 33 LPCTPLAIVKILEFL-GIYNKILPYGNRLYG--KTITIINR------------------SEVVGRPLAALLANDGARVYS 91 (197)
T ss_pred cCCCHHHHHHHHHHh-CCcccccccCCCCCC--CEEEEECC------------------CccchHHHHHHHHHCCCEEEE
Confidence 466788777655533 11 125765 99999988 888899999999999999999
Q ss_pred EeeCC
Q 022803 91 LYRRG 95 (292)
Q Consensus 91 i~g~~ 95 (292)
.|..+
T Consensus 92 ~~~~~ 96 (197)
T cd01079 92 VDING 96 (197)
T ss_pred EecCc
Confidence 97654
No 321
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=84.09 E-value=8.2 Score=36.44 Aligned_cols=54 Identities=15% Similarity=0.137 Sum_probs=42.2
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+-+..+ +-++.| |+|+|-+. |+.-|.-+|.-|.++||.||..|..
T Consensus 138 ~PcTp~av~~lL~~~---~i~l~G--k~vvViGr------------------S~~VGkPla~lL~~~~AtVt~chs~ 191 (278)
T PRK14172 138 LPCTPNSVITLIKSL---NIDIEG--KEVVVIGR------------------SNIVGKPVAQLLLNENATVTICHSK 191 (278)
T ss_pred cCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CccchHHHHHHHHHCCCEEEEeCCC
Confidence 466777666544332 236766 99999998 8888999999999999999999964
No 322
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=83.41 E-value=2.2 Score=38.03 Aligned_cols=25 Identities=28% Similarity=0.397 Sum_probs=22.7
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|.||.++|..+++.|++|+++.+.
T Consensus 9 ~G~mG~ala~~L~~~G~~V~v~~r~ 33 (219)
T TIGR01915 9 TGDQGKGLALRLAKAGNKIIIGSRD 33 (219)
T ss_pred CCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 8999999999999999999987653
No 323
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=83.25 E-value=11 Score=35.56 Aligned_cols=54 Identities=20% Similarity=0.182 Sum_probs=42.4
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+-+..+ +-++.| ++|+|.+. |...|..+|.-+..+|+.|+..|..
T Consensus 132 ~PcTp~av~~ll~~~---~i~l~G--k~V~ViGr------------------s~~vGrpla~lL~~~~atVtv~hs~ 185 (279)
T PRK14178 132 APCTPNGIMTLLHEY---KISIAG--KRAVVVGR------------------SIDVGRPMAALLLNADATVTICHSK 185 (279)
T ss_pred CCCCHHHHHHHHHHc---CCCCCC--CEEEEECC------------------CccccHHHHHHHHhCCCeeEEEecC
Confidence 566787776544432 236765 99999998 7888999999999999999999963
No 324
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=83.20 E-value=11 Score=35.84 Aligned_cols=54 Identities=13% Similarity=0.145 Sum_probs=42.1
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+.+..+ +-++.| |+|+|-+. |.--|.-+|.-|.++||.||+.|..
T Consensus 139 ~PcTp~av~~lL~~y---~i~l~G--K~vvViGr------------------S~iVGkPla~lL~~~~ATVtichs~ 192 (288)
T PRK14171 139 IPCTALGCLAVIKKY---EPNLTG--KNVVIIGR------------------SNIVGKPLSALLLKENCSVTICHSK 192 (288)
T ss_pred cCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CCcchHHHHHHHHHCCCEEEEeCCC
Confidence 566777666444332 236766 99999988 8888999999999999999999964
No 325
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=82.87 E-value=1.7 Score=40.30 Aligned_cols=38 Identities=29% Similarity=0.391 Sum_probs=29.0
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
++|+|++||+--.+. ....+|+++.++|++|+++.++.
T Consensus 1 ~~i~~~~g~~~g~~~--------------~~~~La~~L~~~g~eV~vv~~~~ 38 (348)
T TIGR01133 1 KKVVLAAGGTGGHIF--------------PALAVAEELIKRGVEVLWLGTKR 38 (348)
T ss_pred CeEEEEeCccHHHHh--------------HHHHHHHHHHhCCCEEEEEeCCC
Confidence 468888887754443 23489999999999999998754
No 326
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=82.85 E-value=11 Score=35.63 Aligned_cols=54 Identities=22% Similarity=0.222 Sum_probs=42.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+.+..+ +-++.| |+|+|-+. |+--|.-+|.-|..+||.||..|..
T Consensus 138 ~PcTp~av~~lL~~~---~i~l~G--k~vvViGr------------------S~iVG~Pla~lL~~~~atVt~chs~ 191 (284)
T PRK14190 138 LPCTPHGILELLKEY---NIDISG--KHVVVVGR------------------SNIVGKPVGQLLLNENATVTYCHSK 191 (284)
T ss_pred CCCCHHHHHHHHHHc---CCCCCC--CEEEEECC------------------CCccHHHHHHHHHHCCCEEEEEeCC
Confidence 566777666544332 236765 99999998 8889999999999999999998853
No 327
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=82.25 E-value=14 Score=34.91 Aligned_cols=54 Identities=20% Similarity=0.150 Sum_probs=42.1
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+-+..+ +-++.| |+|+|-+. |..-|.-+|.-|.++||.||..|..
T Consensus 137 ~PcTp~avi~ll~~~---~i~l~G--k~vvViGr------------------S~iVGkPla~lL~~~~AtVtichs~ 190 (282)
T PRK14182 137 RPCTPAGVMRMLDEA---RVDPKG--KRALVVGR------------------SNIVGKPMAMMLLERHATVTIAHSR 190 (282)
T ss_pred CCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CCcchHHHHHHHHHCCCEEEEeCCC
Confidence 466777666544332 235655 99999998 8888999999999999999999864
No 328
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=82.07 E-value=11 Score=35.98 Aligned_cols=54 Identities=17% Similarity=0.027 Sum_probs=41.9
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+.+..+ +-++.| |+|+|-+. |.--|.-+|.-|.++||.||..|..
T Consensus 140 ~PcTp~avi~lL~~~---~i~l~G--k~vvViGr------------------S~iVGkPla~lL~~~~aTVt~chs~ 193 (294)
T PRK14187 140 IPCTPKGCLYLIKTI---TRNLSG--SDAVVIGR------------------SNIVGKPMACLLLGENCTVTTVHSA 193 (294)
T ss_pred cCcCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CccchHHHHHHHhhCCCEEEEeCCC
Confidence 456777666444332 236765 99999988 8888999999999999999999975
No 329
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=81.83 E-value=3.1 Score=40.83 Aligned_cols=35 Identities=29% Similarity=0.293 Sum_probs=28.1
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHH-CCCeEEEEeeCCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIK-MGYAVIFLYRRGT 96 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~-~Ga~V~~i~g~~~ 96 (292)
++||.|++ ||-+|+.+..+++. +-++|+.+-+..+
T Consensus 1 ~~vlLTGA------------------TGFLG~yLl~eLL~~~~~kv~cLVRA~s 36 (382)
T COG3320 1 RNVLLTGA------------------TGFLGAYLLLELLDRSDAKVICLVRAQS 36 (382)
T ss_pred CeEEEecC------------------chHhHHHHHHHHHhcCCCcEEEEEecCC
Confidence 47899999 99999777777666 4569988887655
No 330
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=81.80 E-value=9.5 Score=36.38 Aligned_cols=54 Identities=19% Similarity=0.094 Sum_probs=43.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+.+..+ +-++.| |+|+|-+- |.--|.-+|.-|.++||.||..|..
T Consensus 147 ~PcTp~avi~lL~~~---~i~l~G--k~vvVIGR------------------S~iVGkPla~lL~~~~ATVtvchs~ 200 (299)
T PLN02516 147 LPCTPKGCLELLSRS---GIPIKG--KKAVVVGR------------------SNIVGLPVSLLLLKADATVTVVHSR 200 (299)
T ss_pred CCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CccchHHHHHHHHHCCCEEEEeCCC
Confidence 566788766555432 236766 99999988 8888999999999999999999975
No 331
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=81.80 E-value=2.2 Score=41.85 Aligned_cols=32 Identities=22% Similarity=0.144 Sum_probs=28.3
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEee
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
+|+|+||++ .| .|.++|+.|+++|+.|++...
T Consensus 5 ~k~v~v~G~------------------g~-~G~s~a~~l~~~G~~V~~~d~ 36 (447)
T PRK02472 5 NKKVLVLGL------------------AK-SGYAAAKLLHKLGANVTVNDG 36 (447)
T ss_pred CCEEEEEee------------------CH-HHHHHHHHHHHCCCEEEEEcC
Confidence 399999998 44 899999999999999999864
No 332
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=81.64 E-value=2.5 Score=40.37 Aligned_cols=35 Identities=26% Similarity=0.320 Sum_probs=32.0
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.+++|+||+| -|-.|..|++-+...|++|+.+...
T Consensus 26 ~~lrI~itGg------------------aGFIgSHLvdkLm~egh~VIa~Dn~ 60 (350)
T KOG1429|consen 26 QNLRILITGG------------------AGFIGSHLVDKLMTEGHEVIALDNY 60 (350)
T ss_pred CCcEEEEecC------------------cchHHHHHHHHHHhcCCeEEEEecc
Confidence 3499999999 8999999999999999999998864
No 333
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=81.15 E-value=1.8 Score=37.77 Aligned_cols=25 Identities=24% Similarity=0.444 Sum_probs=21.9
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|.||..||..|+..|++|+++...
T Consensus 7 aG~mG~~iA~~~a~~G~~V~l~d~~ 31 (180)
T PF02737_consen 7 AGTMGRGIAALFARAGYEVTLYDRS 31 (180)
T ss_dssp -SHHHHHHHHHHHHTTSEEEEE-SS
T ss_pred CCHHHHHHHHHHHhCCCcEEEEECC
Confidence 6999999999999999999999864
No 334
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=80.72 E-value=9.4 Score=37.41 Aligned_cols=54 Identities=19% Similarity=0.138 Sum_probs=42.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+.+..+ +-++.| |+|+|-+. |.--|.-+|.-|.++||.||..|..
T Consensus 211 ~PCTp~avielL~~y---~i~l~G--K~vvVIGR------------------S~iVGkPLa~LL~~~~ATVTicHs~ 264 (364)
T PLN02616 211 VPCTPKGCIELLHRY---NVEIKG--KRAVVIGR------------------SNIVGMPAALLLQREDATVSIVHSR 264 (364)
T ss_pred CCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CccccHHHHHHHHHCCCeEEEeCCC
Confidence 566788766544432 236766 99999888 7888999999999999999999975
No 335
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=80.51 E-value=16 Score=34.61 Aligned_cols=54 Identities=13% Similarity=0.059 Sum_probs=42.2
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHH--CCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIK--MGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~--~Ga~V~~i~g~ 94 (292)
.|..|..+.+.+..+ +-++.| |+|+|-+. |+.-|.-+|.-|.+ +||.||+.|..
T Consensus 138 ~PcTp~av~~ll~~~---~i~l~G--k~vvViGr------------------S~~VGkPla~lL~~~~~~atVtvchs~ 193 (284)
T PRK14193 138 LPCTPRGIVHLLRRY---DVELAG--AHVVVIGR------------------GVTVGRPIGLLLTRRSENATVTLCHTG 193 (284)
T ss_pred CCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CCcchHHHHHHHhhccCCCEEEEeCCC
Confidence 566777776555433 236755 99999888 88899999999998 89999999974
No 336
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=80.39 E-value=3.8 Score=31.43 Aligned_cols=63 Identities=14% Similarity=0.056 Sum_probs=30.5
Q ss_pred hhhccCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHH--HHHHHHHCCCeE
Q 022803 11 SFFDSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAA--STEHLIKMGYAV 88 (292)
Q Consensus 11 ~~~~~~~~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~--iAe~~~~~Ga~V 88 (292)
.|...+.-|..-..-+..-.++...+..+. +.|+|||+++ |...|.+ ||.+| ..|++.
T Consensus 8 g~i~~taHP~GC~~~V~~qI~yvk~~~~~~-GpK~VLViGa------------------StGyGLAsRIa~aF-g~gA~T 67 (78)
T PF12242_consen 8 GFICTTAHPVGCARNVENQIEYVKSQGKIN-GPKKVLVIGA------------------STGYGLASRIAAAF-GAGADT 67 (78)
T ss_dssp TTEES---HHHHHHHHHHHHHHHHHC---T-S-SEEEEES-------------------SSHHHHHHHHHHHH-CC--EE
T ss_pred ceeECCCCcHHHHHHHHHHHHHHHhcCCCC-CCceEEEEec------------------CCcccHHHHHHHHh-cCCCCE
Confidence 344444333333333334444554444554 3599999999 5556666 66666 788887
Q ss_pred EEEee
Q 022803 89 IFLYR 93 (292)
Q Consensus 89 ~~i~g 93 (292)
+=|+-
T Consensus 68 iGV~f 72 (78)
T PF12242_consen 68 IGVSF 72 (78)
T ss_dssp EEEE-
T ss_pred EEEee
Confidence 76664
No 337
>PRK06444 prephenate dehydrogenase; Provisional
Probab=79.35 E-value=2.7 Score=37.56 Aligned_cols=21 Identities=24% Similarity=0.267 Sum_probs=19.7
Q ss_pred ccHHHHHHHHHHHHCCCeEEE
Q 022803 70 SGHRGAASTEHLIKMGYAVIF 90 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~ 90 (292)
+|+||..+|+.|.+.|+.|++
T Consensus 9 ~G~mG~~~~~~~~~~g~~v~~ 29 (197)
T PRK06444 9 NGRLGRVLCSILDDNGLGVYI 29 (197)
T ss_pred CCcHHHHHHHHHHhCCCEEEE
Confidence 999999999999999999863
No 338
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=79.30 E-value=3.9 Score=36.53 Aligned_cols=36 Identities=22% Similarity=0.335 Sum_probs=30.8
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
++.| |+|||-+| |..|..-++.|++.||+|++|+..
T Consensus 6 ~l~g--k~vlVvGg-------------------G~va~rk~~~Ll~~ga~VtVvsp~ 41 (205)
T TIGR01470 6 NLEG--RAVLVVGG-------------------GDVALRKARLLLKAGAQLRVIAEE 41 (205)
T ss_pred EcCC--CeEEEECc-------------------CHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3555 89999888 688999999999999999999854
No 339
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=78.75 E-value=3.2 Score=31.55 Aligned_cols=25 Identities=32% Similarity=0.494 Sum_probs=22.9
Q ss_pred ccHHHHHHHHHHHHCC---CeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMG---YAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~G---a~V~~i~g~ 94 (292)
+|.||.+|++.++..| ++|++++.+
T Consensus 7 ~G~mg~al~~~l~~~g~~~~~v~~~~~r 34 (96)
T PF03807_consen 7 AGNMGSALARGLLASGIKPHEVIIVSSR 34 (96)
T ss_dssp TSHHHHHHHHHHHHTTS-GGEEEEEEES
T ss_pred CCHHHHHHHHHHHHCCCCceeEEeeccC
Confidence 8999999999999999 999988654
No 340
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=78.03 E-value=2.7 Score=39.48 Aligned_cols=37 Identities=35% Similarity=0.533 Sum_probs=32.4
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCC
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~ 96 (292)
.+|+.|||+= ||+-|.-|||.++.+||+|.=|-+..|
T Consensus 27 ~rkvALITGI------------------tGQDGSYLaEfLL~KgYeVHGiiRRsS 63 (376)
T KOG1372|consen 27 PRKVALITGI------------------TGQDGSYLAEFLLSKGYEVHGIIRRSS 63 (376)
T ss_pred cceEEEEecc------------------cCCCchHHHHHHHhCCceeeEEEeecc
Confidence 4578999986 899999999999999999988877755
No 341
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=77.80 E-value=16 Score=34.59 Aligned_cols=54 Identities=17% Similarity=0.129 Sum_probs=41.1
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+.+..+ +-++.| |+|+|-+. |+.-|.-+|.-+..+|+.|+..|..
T Consensus 138 ~PcTp~aii~lL~~~---~i~l~G--k~vvViGr------------------s~iVGkPla~lL~~~~atVt~~hs~ 191 (285)
T PRK14189 138 RPCTPYGVMKMLESI---GIPLRG--AHAVVIGR------------------SNIVGKPMAMLLLQAGATVTICHSK 191 (285)
T ss_pred cCCCHHHHHHHHHHc---CCCCCC--CEEEEECC------------------CCccHHHHHHHHHHCCCEEEEecCC
Confidence 466677666444322 235755 99999988 7788999999999999999998864
No 342
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=77.78 E-value=11 Score=36.70 Aligned_cols=54 Identities=15% Similarity=-0.016 Sum_probs=42.2
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+-+..+ +-++.| |+|+|-+- |..-|.-+|.-|.++||.||..|..
T Consensus 194 ~PCTp~avi~LL~~~---~i~l~G--K~vvVIGR------------------S~iVGkPla~LL~~~~ATVTicHs~ 247 (345)
T PLN02897 194 VSCTPKGCVELLIRS---GVEIAG--KNAVVIGR------------------SNIVGLPMSLLLQRHDATVSTVHAF 247 (345)
T ss_pred cCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CccccHHHHHHHHHCCCEEEEEcCC
Confidence 566777776554332 235765 99999888 7788999999999999999999975
No 343
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=77.69 E-value=10 Score=31.93 Aligned_cols=54 Identities=20% Similarity=0.094 Sum_probs=40.1
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..++.+.+.+..+ +.+++| |+|+|=+. |+.-|..+|..+.++|+.|+..|..
T Consensus 8 ~p~t~~a~~~ll~~~---~~~~~g--k~v~VvGr------------------s~~vG~pla~lL~~~gatV~~~~~~ 61 (140)
T cd05212 8 VSPVAKAVKELLNKE---GVRLDG--KKVLVVGR------------------SGIVGAPLQCLLQRDGATVYSCDWK 61 (140)
T ss_pred cccHHHHHHHHHHHc---CCCCCC--CEEEEECC------------------CchHHHHHHHHHHHCCCEEEEeCCC
Confidence 344555554433322 236765 99999887 8889999999999999999999964
No 344
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=77.61 E-value=22 Score=33.69 Aligned_cols=54 Identities=20% Similarity=0.190 Sum_probs=41.9
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHC----CCeEEEEee
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM----GYAVIFLYR 93 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~----Ga~V~~i~g 93 (292)
.|..|..+.+.+..+ +-++.| |+|+|-+. |..-|.-+|.-|.++ ||.||..|.
T Consensus 133 ~PcTp~avi~lL~~~---~i~l~G--k~vvViGr------------------S~iVGkPla~lL~~~~~~~~AtVtvchs 189 (287)
T PRK14181 133 IPCTPAGIIELLKYY---EIPLHG--RHVAIVGR------------------SNIVGKPLAALLMQKHPDTNATVTLLHS 189 (287)
T ss_pred CCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CccchHHHHHHHHhCcCCCCCEEEEeCC
Confidence 566787777554432 236765 99999888 888899999999999 899999886
Q ss_pred C
Q 022803 94 R 94 (292)
Q Consensus 94 ~ 94 (292)
.
T Consensus 190 ~ 190 (287)
T PRK14181 190 Q 190 (287)
T ss_pred C
Confidence 4
No 345
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=76.77 E-value=11 Score=35.63 Aligned_cols=54 Identities=20% Similarity=0.156 Sum_probs=42.7
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|..|..+.+.+..+ +-++.| |+|+|.+. |..-|.-+|.-|..+||.||..|..
T Consensus 139 ~PcTp~av~~ll~~~---~i~l~G--k~vvViGr------------------s~iVG~Pla~lL~~~~atVtv~hs~ 192 (285)
T PRK10792 139 RPCTPRGIMTLLERY---GIDTYG--LNAVVVGA------------------SNIVGRPMSLELLLAGCTVTVCHRF 192 (285)
T ss_pred CCCCHHHHHHHHHHc---CCCCCC--CEEEEECC------------------CcccHHHHHHHHHHCCCeEEEEECC
Confidence 566777776554432 236755 99999988 7888999999999999999999975
No 346
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=76.66 E-value=3.6 Score=40.06 Aligned_cols=34 Identities=26% Similarity=0.371 Sum_probs=29.8
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.++|.|-+| .|.||.++|..|.++|+.|+++...
T Consensus 98 ~~~I~IiGG------------------~GlmG~slA~~l~~~G~~V~~~d~~ 131 (374)
T PRK11199 98 LRPVVIVGG------------------KGQLGRLFAKMLTLSGYQVRILEQD 131 (374)
T ss_pred cceEEEEcC------------------CChhhHHHHHHHHHCCCeEEEeCCC
Confidence 367888888 8999999999999999999988753
No 347
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=76.66 E-value=23 Score=33.73 Aligned_cols=54 Identities=19% Similarity=0.116 Sum_probs=41.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHC----CCeEEEEee
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM----GYAVIFLYR 93 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~----Ga~V~~i~g 93 (292)
.|..|..+.+-+..+ +-++.| |+|+|-+. |..-|.-+|.-|.++ ||.||+.|.
T Consensus 137 ~PcTp~avi~lL~~~---~i~l~G--k~vvViGr------------------S~iVGkPla~lL~~~~~~~~aTVtvchs 193 (297)
T PRK14167 137 KPCTPHGIQKLLAAA---GVDTEG--ADVVVVGR------------------SDIVGKPMANLLIQKADGGNATVTVCHS 193 (297)
T ss_pred CCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CcccHHHHHHHHhcCccCCCCEEEEeCC
Confidence 566777666544332 236766 99999998 888899999999998 899999886
Q ss_pred C
Q 022803 94 R 94 (292)
Q Consensus 94 ~ 94 (292)
.
T Consensus 194 ~ 194 (297)
T PRK14167 194 R 194 (297)
T ss_pred C
Confidence 4
No 348
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=75.64 E-value=22 Score=33.78 Aligned_cols=54 Identities=19% Similarity=0.211 Sum_probs=41.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHC----CCeEEEEee
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM----GYAVIFLYR 93 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~----Ga~V~~i~g 93 (292)
.|..|..+.+-+..+ +-++.| |+|+|-+. |..-|.-+|.-|.++ ||.||+.|.
T Consensus 137 ~PcTp~av~~lL~~~---~i~l~G--K~vvViGr------------------S~iVGkPla~lL~~~~~~~~aTVtvchs 193 (293)
T PRK14185 137 VSATPNGILELLKRY---HIETSG--KKCVVLGR------------------SNIVGKPMAQLMMQKAYPGDCTVTVCHS 193 (293)
T ss_pred CCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CccchHHHHHHHHcCCCCCCCEEEEecC
Confidence 466777766544433 235765 99999888 888899999999998 699999997
Q ss_pred C
Q 022803 94 R 94 (292)
Q Consensus 94 ~ 94 (292)
.
T Consensus 194 ~ 194 (293)
T PRK14185 194 R 194 (293)
T ss_pred C
Confidence 5
No 349
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=75.52 E-value=25 Score=33.50 Aligned_cols=54 Identities=19% Similarity=0.132 Sum_probs=41.4
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHC----CCeEEEEee
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM----GYAVIFLYR 93 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~----Ga~V~~i~g 93 (292)
.|..|..+.+-+..+ +-++.| |+|+|-+. |.--|.-+|.-|.++ ||.||..|.
T Consensus 141 ~PcTp~avi~lL~~~---~i~l~G--k~vvViGr------------------S~iVGkPla~lL~~~~~~~~atVtv~hs 197 (297)
T PRK14168 141 LPCTPAGIQEMLVRS---GVETSG--AEVVVVGR------------------SNIVGKPIANMMTQKGPGANATVTIVHT 197 (297)
T ss_pred cCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CCcccHHHHHHHHhcccCCCCEEEEecC
Confidence 466777666544332 236765 99999888 888899999999998 799999986
Q ss_pred C
Q 022803 94 R 94 (292)
Q Consensus 94 ~ 94 (292)
.
T Consensus 198 ~ 198 (297)
T PRK14168 198 R 198 (297)
T ss_pred C
Confidence 5
No 350
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=74.43 E-value=4.1 Score=36.30 Aligned_cols=18 Identities=33% Similarity=0.300 Sum_probs=15.8
Q ss_pred HHHHHHHCCCeEEEEeeC
Q 022803 77 STEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 77 iAe~~~~~Ga~V~~i~g~ 94 (292)
+|+.|+++|++|+++.+.
T Consensus 1 ~a~~l~~~G~~Vv~~~r~ 18 (241)
T PRK12428 1 TARLLRFLGARVIGVDRR 18 (241)
T ss_pred ChHHHHhCCCEEEEEeCC
Confidence 588999999999999875
No 351
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=74.41 E-value=7.5 Score=37.23 Aligned_cols=25 Identities=12% Similarity=-0.025 Sum_probs=20.2
Q ss_pred ccHHHHHHHHHHHHCCC-------eEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGY-------AVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga-------~V~~i~g~ 94 (292)
+|..|..+|..+..+|. ++.|+...
T Consensus 9 aG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~ 40 (323)
T cd00704 9 AGQIGYNLLFLIASGELFGDDQPVILHLLDIP 40 (323)
T ss_pred CcHHHHHHHHHHHhCCccCCCCceEEEEEecC
Confidence 89999999999988663 57777764
No 352
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=74.23 E-value=4.8 Score=37.37 Aligned_cols=69 Identities=19% Similarity=0.134 Sum_probs=41.6
Q ss_pred CceEEEEeCcchhHHHhhccCCCeEEEEEeeccCcHHHHHHHHHHHHHhCCCEEEEeccCC-------------CCcEEE
Q 022803 184 PLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLEKADMARKKYGMHAVVANELLS-------------RKEQVV 250 (292)
Q Consensus 184 ~l~l~L~~~PkIl~~i~~~~~p~~~lVgFklEt~~e~l~~~A~~kL~~k~~D~VvaN~l~~-------------~~n~v~ 250 (292)
.+..+.-|+|+.+....+.--|..-+|...= -...-.+ ++.++++++|++|.=+-.. ..=.++
T Consensus 152 ~~~~RvLP~~~~l~~~~~~G~~~~~iia~~g--Pfs~e~n--~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vi 227 (256)
T TIGR00715 152 VVFVRVLPYPQALAQALKLGFPSDRIIAMRG--PFSEELE--KALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVI 227 (256)
T ss_pred eEEEEECCCchhhHHHHHcCCChhcEEEEeC--CCCHHHH--HHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEE
Confidence 3566666888888766653223333543321 1111122 5578899999999877543 256788
Q ss_pred EEeCCC
Q 022803 251 VVTNNG 256 (292)
Q Consensus 251 li~~~~ 256 (292)
+|.+-.
T Consensus 228 vI~RP~ 233 (256)
T TIGR00715 228 RIARPQ 233 (256)
T ss_pred EEeCCC
Confidence 887753
No 353
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=73.82 E-value=3.2 Score=35.11 Aligned_cols=25 Identities=28% Similarity=0.320 Sum_probs=23.6
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|.+|.++|..+..+|++|+++.+.
T Consensus 7 aG~~G~AlA~~la~~g~~V~l~~~~ 31 (157)
T PF01210_consen 7 AGNWGTALAALLADNGHEVTLWGRD 31 (157)
T ss_dssp SSHHHHHHHHHHHHCTEEEEEETSC
T ss_pred cCHHHHHHHHHHHHcCCEEEEEecc
Confidence 6899999999999999999999986
No 354
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=73.72 E-value=5.7 Score=37.21 Aligned_cols=25 Identities=12% Similarity=0.105 Sum_probs=21.1
Q ss_pred ccHHHHHHHHHHHHCCCe-EEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYA-VIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~-V~~i~g~ 94 (292)
+|..|.++|.+++..|+. |+++.+.
T Consensus 134 AGGagrAia~~La~~G~~~V~I~~R~ 159 (289)
T PRK12548 134 AGGAATAIQVQCALDGAKEITIFNIK 159 (289)
T ss_pred CcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 368899999999999997 7777764
No 355
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=72.91 E-value=4.8 Score=37.64 Aligned_cols=25 Identities=24% Similarity=0.364 Sum_probs=23.4
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||..||..++..|++|+++...
T Consensus 13 aG~mG~~iA~~~a~~G~~V~l~d~~ 37 (286)
T PRK07819 13 AGQMGAGIAEVCARAGVDVLVFETT 37 (286)
T ss_pred ccHHHHHHHHHHHhCCCEEEEEECC
Confidence 7899999999999999999999864
No 356
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=72.88 E-value=14 Score=31.67 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=28.4
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEee
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
.++|+|=+|+.. .|.-|.++|+.+..+|+.|+++.-
T Consensus 25 ~~~v~il~G~Gn---------------NGgDgl~~AR~L~~~G~~V~v~~~ 60 (169)
T PF03853_consen 25 GPRVLILCGPGN---------------NGGDGLVAARHLANRGYNVTVYLV 60 (169)
T ss_dssp T-EEEEEE-SSH---------------HHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCeEEEEECCCC---------------ChHHHHHHHHHHHHCCCeEEEEEE
Confidence 388888888553 889999999999999999988443
No 357
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=72.60 E-value=5.7 Score=36.82 Aligned_cols=38 Identities=26% Similarity=0.309 Sum_probs=29.0
Q ss_pred eEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCC
Q 022803 45 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (292)
Q Consensus 45 ~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~ 96 (292)
+|+|++|+|--.+ +....+|+++.++||+|+++.+...
T Consensus 1 ~~~~~~~~~gG~~--------------~~~~~la~~l~~~G~ev~v~~~~~~ 38 (350)
T cd03785 1 RILIAGGGTGGHI--------------FPALALAEELRERGAEVLFLGTKRG 38 (350)
T ss_pred CEEEEecCchhhh--------------hHHHHHHHHHHhCCCEEEEEECCCc
Confidence 4788888765433 2456899999999999999987543
No 358
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=72.36 E-value=5.1 Score=33.97 Aligned_cols=24 Identities=38% Similarity=0.553 Sum_probs=21.2
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEee
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
.|.||..+|+.|+++|++|+...+
T Consensus 9 lG~mG~~~a~~L~~~g~~v~~~d~ 32 (163)
T PF03446_consen 9 LGNMGSAMARNLAKAGYEVTVYDR 32 (163)
T ss_dssp -SHHHHHHHHHHHHTTTEEEEEES
T ss_pred hHHHHHHHHHHHHhcCCeEEeecc
Confidence 699999999999999999987764
No 359
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=72.04 E-value=14 Score=34.86 Aligned_cols=53 Identities=25% Similarity=0.240 Sum_probs=38.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 19 LNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 19 ~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+..+.-+.+.+..+ +..+.| |+|+|-+- ||.-|..+|..+..+|+.|++.|+.
T Consensus 140 p~T~~gii~~L~~~---~i~l~G--k~vvViG~------------------gg~vGkpia~~L~~~gatVtv~~~~ 192 (283)
T PRK14192 140 SATPAGIMRLLKAY---NIELAG--KHAVVVGR------------------SAILGKPMAMMLLNANATVTICHSR 192 (283)
T ss_pred CCcHHHHHHHHHHc---CCCCCC--CEEEEECC------------------cHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 44454444433321 235655 89999877 7779999999999999999999973
No 360
>PRK08655 prephenate dehydrogenase; Provisional
Probab=71.87 E-value=6.5 Score=39.15 Aligned_cols=25 Identities=28% Similarity=0.337 Sum_probs=22.7
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|.||.++|..+..+|++|+++.+.
T Consensus 9 ~G~mG~slA~~L~~~G~~V~v~~r~ 33 (437)
T PRK08655 9 TGGLGKWFARFLKEKGFEVIVTGRD 33 (437)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 8999999999999999999887753
No 361
>PLN02503 fatty acyl-CoA reductase 2
Probab=70.42 E-value=6 Score=41.26 Aligned_cols=34 Identities=12% Similarity=0.239 Sum_probs=29.2
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCe---EEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA---VIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~---V~~i~g~ 94 (292)
+|+||||+| ||-+|..|++.+++.+.+ |.++.++
T Consensus 119 ~k~VlVTGa------------------TGFLGk~LlekLLr~~~~v~kIy~LvR~ 155 (605)
T PLN02503 119 GKNFLITGA------------------TGFLAKVLIEKILRTNPDVGKIYLLIKA 155 (605)
T ss_pred CCEEEEcCC------------------chHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 499999999 999999999999998764 5666664
No 362
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=70.04 E-value=15 Score=35.71 Aligned_cols=26 Identities=23% Similarity=0.300 Sum_probs=23.8
Q ss_pred CccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 69 SSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 69 SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.||-||.++|-.++.+||.++++...
T Consensus 111 TSGNtGigLA~~~a~~Gyk~i~tmP~ 136 (362)
T KOG1252|consen 111 TSGNTGIGLAYMAALRGYKCIITMPE 136 (362)
T ss_pred CCCchHHHHHHHHHHcCceEEEEech
Confidence 49999999999999999999999853
No 363
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=69.92 E-value=14 Score=37.70 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=27.6
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEee
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
+|+|||+++ |.+|.++|.+++++|++|+++.+
T Consensus 379 ~k~vlIlGa-------------------GGagrAia~~L~~~G~~V~i~nR 410 (529)
T PLN02520 379 GKLFVVIGA-------------------GGAGKALAYGAKEKGARVVIANR 410 (529)
T ss_pred CCEEEEECC-------------------cHHHHHHHHHHHHCCCEEEEEcC
Confidence 389999876 58899999999999998887765
No 364
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=69.14 E-value=11 Score=37.58 Aligned_cols=32 Identities=22% Similarity=0.270 Sum_probs=27.6
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
++|+|.+| |..|.++|+.|.++|++|+++.+.
T Consensus 17 ~~v~viG~-------------------G~~G~~~A~~L~~~G~~V~~~d~~ 48 (480)
T PRK01438 17 LRVVVAGL-------------------GVSGFAAADALLELGARVTVVDDG 48 (480)
T ss_pred CEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 78888766 678999999999999999998754
No 365
>COG1157 FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=69.04 E-value=7.3 Score=38.90 Aligned_cols=58 Identities=19% Similarity=0.328 Sum_probs=40.7
Q ss_pred HHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 29 LKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 29 ~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.+|+.....-.|-+|.|+|-|=.-.-|+. -++ -+.++.+|||+|..+|.+|.|+.-.
T Consensus 204 VrEFIE~~Lg~egl~rsViVvATSD~s~l~--R~~------aa~~At~IAEyFRDqG~~VLL~mDS 261 (441)
T COG1157 204 VREFIEKDLGEEGLKRSVVVVATSDESALM--RLK------AAFTATTIAEYFRDQGKRVLLIMDS 261 (441)
T ss_pred HHHHHHHhcchhhccceEEEEECCCCCHHH--HHH------HHHHHHHHHHHHHhCCCeEEEEeec
Confidence 445554321112345788888877777776 333 5678999999999999999999843
No 366
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase. Class I lysyl tRNA synthetase (LysRS) catalytic core domain. This class I enzyme is a monomer which aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. The class I LysRS is found only in archaea and some bacteria and has evolved separately from class II LysRS, as the two do not share structural or sequence similarity.
Probab=68.75 E-value=15 Score=35.75 Aligned_cols=49 Identities=20% Similarity=0.224 Sum_probs=43.7
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTC 97 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~ 97 (292)
.+++||+|-| +++.=-|.|+-+--++-.+|+++..+|++|.|+++....
T Consensus 19 ~~~~v~tgi~-----psG~~HIG~~~e~i~~D~i~R~lr~~G~~v~~v~~~Dd~ 67 (353)
T cd00674 19 EKYVVASGIS-----PSGHIHIGNFREVITADLVARALRDLGFEVRLIYSWDDY 67 (353)
T ss_pred CeEEEecCCC-----CCCCcccCccHHHHHHHHHHHHHHHcCCCEEEEEEEcCC
Confidence 5799999986 347888999999999999999999999999999998765
No 367
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=68.68 E-value=11 Score=35.51 Aligned_cols=36 Identities=19% Similarity=0.192 Sum_probs=30.1
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.+.| ++|+|.+. |++|.++|+.+..+|++|+++.+.
T Consensus 148 ~l~g--k~v~IiG~-------------------G~iG~avA~~L~~~G~~V~v~~R~ 183 (287)
T TIGR02853 148 TIHG--SNVMVLGF-------------------GRTGMTIARTFSALGARVFVGARS 183 (287)
T ss_pred CCCC--CEEEEEcC-------------------hHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4544 88888764 899999999999999999988764
No 368
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=67.47 E-value=7.5 Score=37.29 Aligned_cols=25 Identities=20% Similarity=0.206 Sum_probs=23.1
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|.||..||..|+..|++|+++...
T Consensus 15 aG~MG~giA~~~a~aG~~V~l~D~~ 39 (321)
T PRK07066 15 SGVIGSGWVARALAHGLDVVAWDPA 39 (321)
T ss_pred cCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 7899999999999999999998853
No 369
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=67.43 E-value=12 Score=30.65 Aligned_cols=24 Identities=21% Similarity=0.385 Sum_probs=20.0
Q ss_pred ccHHHHHHHHHHHHCC-CeEEEEee
Q 022803 70 SGHRGAASTEHLIKMG-YAVIFLYR 93 (292)
Q Consensus 70 SG~~G~~iAe~~~~~G-a~V~~i~g 93 (292)
.|.+|.++|+.+...| +.|+++.+
T Consensus 27 ~G~~g~~~a~~l~~~g~~~v~v~~r 51 (155)
T cd01065 27 AGGAARAVAYALAELGAAKIVIVNR 51 (155)
T ss_pred CcHHHHHHHHHHHHCCCCEEEEEcC
Confidence 5799999999999996 66777664
No 370
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=67.39 E-value=10 Score=34.92 Aligned_cols=34 Identities=26% Similarity=0.495 Sum_probs=29.3
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEe
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 92 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~ 92 (292)
++|+|=+|+-. .|.-|+.+|+.|+.+|++|+++.
T Consensus 61 ~~V~VlcG~GN---------------NGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 61 PRVLLVCGPGN---------------NGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred CeEEEEECCCC---------------CchhHHHHHHHHHHCCCeEEEEE
Confidence 67888888542 88999999999999999999887
No 371
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=67.05 E-value=6.3 Score=35.76 Aligned_cols=161 Identities=16% Similarity=0.066 Sum_probs=77.1
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCCCC--CCccCCCCCccchhhhhcc-cccceEEeecccccccchhHHHHHHHHHHH
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRGTC--EPYCSSLPDDAFLECFEVT-EESAVQGSSRRPSVEASLYNYIRMLQMIAV 146 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~~~--~P~~~~l~~~~~~~~~~~~-~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~ 146 (292)
+|.+|.++|+.|...|++|++-.+...- .-....+.. .+.-.... .....+|+=. +. =|......+.+
T Consensus 9 tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~--~i~~~~~~dA~~~aDVVvL-----AV--P~~a~~~v~~~ 79 (211)
T COG2085 9 TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGP--LITGGSNEDAAALADVVVL-----AV--PFEAIPDVLAE 79 (211)
T ss_pred cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhcc--ccccCChHHHHhcCCEEEE-----ec--cHHHHHhHHHH
Confidence 8999999999999999999999665321 000000000 00000000 0000111000 11 01122222222
Q ss_pred HHhhcCCCceEEEeecccCCcCCccccccccccCCCC--CceEEEEeCcchhHHHhhcc--------CCCeEEEEEeecc
Q 022803 147 SSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSG--PLDMQLLQVPKMLSVLRKEW--------APMAFCISFKLET 216 (292)
Q Consensus 147 ~l~~~~~~d~~i~aAAVsDf~v~~~~~~~~KI~s~~~--~l~l~L~~~PkIl~~i~~~~--------~p~~~lVgFklEt 216 (292)
....++ |-++--+.+.+++. .....-....+++. ++.=++.|.+|+++.+.... .+. .-+.--+-.
T Consensus 80 l~~~~~--~KIvID~tnp~~~~-~~~~~~~~~~~~~saae~va~~lp~akVVkAFn~i~a~~l~~~~~~~-~~~~v~vag 155 (211)
T COG2085 80 LRDALG--GKIVIDATNPIEVN-GEPGDLYLVPSEGSAAEIVAKLLPGAKVVKAFNTIPAAVLADLAKPG-GRRDVLVAG 155 (211)
T ss_pred HHHHhC--CeEEEecCCCcccc-CCccccccCCCCCcHHHHHHHHCCCcchhhhhcccCHHHhccCCCcC-CceeEEEec
Confidence 222233 44555555552110 01111223333211 24556778888887665431 121 223333445
Q ss_pred CcHHHHHHHHHHHHHhCCCEEEEeccC
Q 022803 217 DAEILLEKADMARKKYGMHAVVANELL 243 (292)
Q Consensus 217 ~~e~l~~~A~~kL~~k~~D~VvaN~l~ 243 (292)
|+++-.+.+.+..++-|++.|-+=.|+
T Consensus 156 DD~~Ak~~v~~L~~~iG~~~ld~G~L~ 182 (211)
T COG2085 156 DDAEAKAVVAELAEDIGFRPLDAGPLE 182 (211)
T ss_pred CcHHHHHHHHHHHHhcCcceeeccccc
Confidence 666678888888888899999887765
No 372
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=67.00 E-value=12 Score=30.45 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=24.5
Q ss_pred eeeecCCccHHHHHHHHHHHH-CCCeEEEEeeC
Q 022803 63 RYIDNFSSGHRGAASTEHLIK-MGYAVIFLYRR 94 (292)
Q Consensus 63 R~ItN~SSG~~G~~iAe~~~~-~Ga~V~~i~g~ 94 (292)
|..=+-.+|+||..|++.+.+ .|+++.-...+
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~ 34 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDR 34 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEET
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEec
Confidence 445555699999999999999 88886555543
No 373
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=65.57 E-value=6.5 Score=35.53 Aligned_cols=26 Identities=23% Similarity=0.404 Sum_probs=23.6
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
-|+.|..+|+.|.++|++|++|....
T Consensus 8 ~G~vG~~va~~L~~~g~~Vv~Id~d~ 33 (225)
T COG0569 8 AGRVGRSVARELSEEGHNVVLIDRDE 33 (225)
T ss_pred CcHHHHHHHHHHHhCCCceEEEEcCH
Confidence 37999999999999999999999753
No 374
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=65.12 E-value=7.2 Score=36.62 Aligned_cols=25 Identities=20% Similarity=0.143 Sum_probs=23.1
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||.++|..++.+|++|+++...
T Consensus 10 ~G~mG~~iA~~la~~G~~V~v~d~~ 34 (308)
T PRK06129 10 AGLIGRAWAIVFARAGHEVRLWDAD 34 (308)
T ss_pred ccHHHHHHHHHHHHCCCeeEEEeCC
Confidence 7899999999999999999999864
No 375
>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation. ALS catalyzes the conversion of 2 molecules of pyruvate to acetolactate and carbon dioxide. ALS does not contain FAD, and requires TPP and a divalent metal cation for activity.
Probab=64.15 E-value=21 Score=30.80 Aligned_cols=52 Identities=12% Similarity=-0.021 Sum_probs=35.5
Q ss_pred ceEEEecCCcc-------cccCCCceeeeecCCccHHHHHHHHH----HHHCCCeEEEEeeCCC
Q 022803 44 RVACVTSGGTT-------VPLEQRCVRYIDNFSSGHRGAASTEH----LIKMGYAVIFLYRRGT 96 (292)
Q Consensus 44 k~VLITaG~T~-------E~ID~~~VR~ItN~SSG~~G~~iAe~----~~~~Ga~V~~i~g~~~ 96 (292)
..++++-.|+. -+++. +-||+++...|.||+++.-+ ++..+..|+.|.|.++
T Consensus 15 ~~ii~~d~G~~~~~~~~~~~~~~-~~~~~~~~~~g~mG~~lp~aiGa~la~~~~~vv~i~GDG~ 77 (177)
T cd02010 15 DDIVLLDVGAHKIWMARYYRTYA-PNTCLISNGLATMGVALPGAIGAKLVYPDRKVVAVSGDGG 77 (177)
T ss_pred CcEEEecCcHHHHHHHHhCCcCC-CCCEEeCCCChhhhhHHHHHHHHHHhCCCCcEEEEEcchH
Confidence 55666665541 22232 66999999999999666554 4444678999999765
No 376
>PRK14569 D-alanyl-alanine synthetase A; Provisional
Probab=63.97 E-value=11 Score=35.11 Aligned_cols=39 Identities=21% Similarity=0.272 Sum_probs=35.0
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEee
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
|.+|+.+|...|.-. |=+.|.++++++.+.||+|+++..
T Consensus 5 ~i~vl~gg~s~e~~v-----------sl~s~~~v~~aL~~~g~~~~~~~~ 43 (296)
T PRK14569 5 KIVVLYGGDSPEREV-----------SLKSGKAVLDSLISQGYDAVGVDA 43 (296)
T ss_pred EEEEEeCCCCCchHh-----------HHHHHHHHHHHHHHcCCEEEEEcC
Confidence 778888898888888 889999999999999999998863
No 377
>cd01132 F1_ATPase_alpha F1 ATP synthase alpha, central domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta and epsilon subunits with a stoichiometry of 3:3:1:1:1. The alpha subunit of the F1 ATP synthase can bind nucleotides, but is non-catalytic.
Probab=63.91 E-value=19 Score=33.93 Aligned_cols=43 Identities=16% Similarity=0.271 Sum_probs=31.8
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.|+|.+-...-|.. |++ +..+|.++||+|..+|.+|.++.-.
T Consensus 127 ~tvvv~~t~d~~~~~----r~~----a~~~a~aiAE~fr~~G~~Vlvl~Ds 169 (274)
T cd01132 127 YTIVVAATASDPAPL----QYL----APYTGCAMGEYFMDNGKHALIIYDD 169 (274)
T ss_pred eeEEEEeCCCCchhH----HHH----HHHHHHHHHHHHHHCCCCEEEEEcC
Confidence 667777665544443 332 4668999999999999999999864
No 378
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=63.41 E-value=12 Score=35.11 Aligned_cols=39 Identities=26% Similarity=0.336 Sum_probs=27.8
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 96 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~ 96 (292)
++|+|++||+-..+ +....+|+++.++|++|+++.++.+
T Consensus 2 ~~i~i~~~g~gG~~--------------~~~~~la~~L~~~g~ev~vv~~~~~ 40 (357)
T PRK00726 2 KKILLAGGGTGGHV--------------FPALALAEELKKRGWEVLYLGTARG 40 (357)
T ss_pred cEEEEEcCcchHhh--------------hHHHHHHHHHHhCCCEEEEEECCCc
Confidence 56778776543222 1234799999999999999988653
No 379
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=63.26 E-value=26 Score=31.37 Aligned_cols=73 Identities=21% Similarity=0.246 Sum_probs=48.9
Q ss_pred ccH--HHHHHHHHHHHCCCeEEEEeeCCCCCCccCCCCCccchhhhhcccccceEEeecccccccchhHHHHHHHHHHHH
Q 022803 70 SGH--RGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQGSSRRPSVEASLYNYIRMLQMIAVS 147 (292)
Q Consensus 70 SG~--~G~~iAe~~~~~Ga~V~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i~v~~~~~a~~~tv~dy~~m~~~i~~~ 147 (292)
||| .+.++++.+.++|+.|.++.|..--.-..+.|. ++- .|=.+..+.+..+
T Consensus 34 sGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~dLg---------------Fs~-----------edR~eniRRvaev 87 (197)
T COG0529 34 SGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRDLG---------------FSR-----------EDRIENIRRVAEV 87 (197)
T ss_pred CCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCCCC---------------CCh-----------HHHHHHHHHHHHH
Confidence 565 577888899999999999999642111222222 100 0224555666666
Q ss_pred HhhcCCCceEEEeecccCCcC
Q 022803 148 SRSLGPCSMFYLAAAVSDFYV 168 (292)
Q Consensus 148 l~~~~~~d~~i~aAAVsDf~v 168 (292)
-+.+.++.+++.+|.+|=|+-
T Consensus 88 Akll~daG~iviva~ISP~r~ 108 (197)
T COG0529 88 AKLLADAGLIVIVAFISPYRE 108 (197)
T ss_pred HHHHHHCCeEEEEEeeCccHH
Confidence 666778899999999999984
No 380
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=62.65 E-value=15 Score=33.56 Aligned_cols=33 Identities=24% Similarity=0.260 Sum_probs=29.8
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEee
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
+.+|||++| +|..|.++++.+...|+.|+.+.+
T Consensus 163 ~~~vlI~ga------------------~g~vG~~~~~~a~~~g~~v~~~~~ 195 (332)
T cd08259 163 GDTVLVTGA------------------GGGVGIHAIQLAKALGARVIAVTR 195 (332)
T ss_pred CCEEEEECC------------------CCHHHHHHHHHHHHcCCeEEEEeC
Confidence 489999998 899999999999999999987765
No 381
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=62.62 E-value=15 Score=33.80 Aligned_cols=25 Identities=28% Similarity=0.303 Sum_probs=21.6
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|.+|.++|.+++..|++|+++.+.
T Consensus 125 aGg~g~aia~~L~~~g~~v~v~~R~ 149 (270)
T TIGR00507 125 AGGAARAVALPLLKADCNVIIANRT 149 (270)
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999999988887653
No 382
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=62.22 E-value=15 Score=34.18 Aligned_cols=35 Identities=17% Similarity=0.070 Sum_probs=30.5
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.+|||+++ +|..|.++++.+..+|+.|+.+.+.
T Consensus 151 ~g~~VlI~Ga------------------~G~vG~~aiqlAk~~G~~Vi~~~~~ 185 (338)
T cd08295 151 KGETVFVSAA------------------SGAVGQLVGQLAKLKGCYVVGSAGS 185 (338)
T ss_pred CCCEEEEecC------------------ccHHHHHHHHHHHHcCCEEEEEeCC
Confidence 3499999998 8999999999999999998877653
No 383
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=62.15 E-value=14 Score=34.56 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=30.7
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
...+||+|| |+|-.|.++|-++..+|+.++++....
T Consensus 52 ~~~vv~~gg----------------s~GN~g~alA~~a~~~G~~~~i~v~~~ 87 (307)
T cd06449 52 ADTLVTVGG----------------IQSNHTRQVAAVAAKLGLKCVLVQENW 87 (307)
T ss_pred CCEEEECCC----------------chhHHHHHHHHHHHHcCCeEEEEecCC
Confidence 567778763 489999999999999999999999764
No 384
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=61.75 E-value=9.4 Score=35.82 Aligned_cols=25 Identities=24% Similarity=0.209 Sum_probs=23.1
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|.||.++|..+...|++|+++.+.
T Consensus 12 ~G~~G~~lA~~l~~~G~~V~~~~r~ 36 (308)
T PRK14619 12 AGAWGSTLAGLASANGHRVRVWSRR 36 (308)
T ss_pred ccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 7999999999999999999988764
No 385
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=61.53 E-value=77 Score=30.15 Aligned_cols=54 Identities=15% Similarity=0.144 Sum_probs=41.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHH----CCCeEEEEee
Q 022803 18 PLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIK----MGYAVIFLYR 93 (292)
Q Consensus 18 ~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~----~Ga~V~~i~g 93 (292)
.|..|..|.+.+..+ +.++.| |+|+|-+. |.--|.-+|.-+.+ +|+.|+..|.
T Consensus 139 ~PcTp~ail~ll~~y---~i~l~G--k~vvViGr------------------S~iVG~Pla~lL~~~~~~~~atVt~~hs 195 (295)
T PRK14174 139 VSCTPYGILELLGRY---NIETKG--KHCVVVGR------------------SNIVGKPMANLMLQKLKESNCTVTICHS 195 (295)
T ss_pred CCCCHHHHHHHHHHh---CCCCCC--CEEEEECC------------------CCcchHHHHHHHHhccccCCCEEEEEeC
Confidence 566777776444332 236755 99999998 88889999999887 7999999986
Q ss_pred C
Q 022803 94 R 94 (292)
Q Consensus 94 ~ 94 (292)
.
T Consensus 196 ~ 196 (295)
T PRK14174 196 A 196 (295)
T ss_pred C
Confidence 4
No 386
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete. This model represents the lysyl-tRNA synthetases that are class I amino-acyl tRNA synthetases. It includes archaeal and spirochete examples of the enzyme. All other known examples are class IIc amino-acyl tRNA synthetases and seem to form a separate orthologous set.
Probab=61.46 E-value=27 Score=35.83 Aligned_cols=51 Identities=25% Similarity=0.260 Sum_probs=44.6
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 99 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P 99 (292)
..++||+|=| ++..--|.|+-.=-++..+++++..+|.+|.||++....-|
T Consensus 18 ~~~~~~tg~~-----psG~~HiG~~~e~~~~d~v~r~~r~~g~~~~~i~~~Dd~D~ 68 (515)
T TIGR00467 18 NLYTVASGIT-----PSGHIHIGNFREVITADAIARALRDSGSEARFIYIADNYDP 68 (515)
T ss_pred CeEEEecCCC-----CCCCccccchhhhhHHHHHHHHHHHcCCCEEEEEEEcCCcc
Confidence 5799999955 66899999999889999999999999999999999866533
No 387
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=61.43 E-value=16 Score=32.69 Aligned_cols=34 Identities=26% Similarity=0.202 Sum_probs=29.9
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+++|+|++| +|.+|.++++.+..+|+.|+.+.+.
T Consensus 145 g~~vlI~g~------------------~~~~g~~~~~~a~~~g~~v~~~~~~ 178 (325)
T cd08253 145 GETVLVHGG------------------SGAVGHAAVQLARWAGARVIATASS 178 (325)
T ss_pred CCEEEEEcC------------------CchHHHHHHHHHHHcCCEEEEEeCC
Confidence 489999988 7889999999999999999887653
No 388
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=61.34 E-value=21 Score=33.38 Aligned_cols=25 Identities=28% Similarity=0.469 Sum_probs=23.9
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGY 86 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga 86 (292)
++||||+| +|.-|.+|.+-....|.
T Consensus 2 ~kIlVtGg------------------~GLVGsAi~~vv~~q~~ 26 (315)
T KOG1431|consen 2 KKILVTGG------------------TGLVGSAIVKVVQEQGF 26 (315)
T ss_pred ceEEEecC------------------CchHHHHHHHHHHhcCC
Confidence 79999999 99999999999999988
No 389
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=61.32 E-value=16 Score=36.01 Aligned_cols=32 Identities=22% Similarity=0.114 Sum_probs=27.7
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|+|+|+++ |+.|.++|+.|+++|+.|+.....
T Consensus 6 ~~~~v~G~-------------------g~~G~~~a~~l~~~g~~v~~~d~~ 37 (445)
T PRK04308 6 KKILVAGL-------------------GGTGISMIAYLRKNGAEVAAYDAE 37 (445)
T ss_pred CEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 88999887 467999999999999999988753
No 390
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=61.20 E-value=19 Score=29.63 Aligned_cols=24 Identities=21% Similarity=0.349 Sum_probs=20.1
Q ss_pred ccHHHHHHHHHHHHCCCe-EEEEee
Q 022803 70 SGHRGAASTEHLIKMGYA-VIFLYR 93 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~-V~~i~g 93 (292)
+|.+|.+++.++..+|+. |+++.+
T Consensus 20 aGg~ar~v~~~L~~~g~~~i~i~nR 44 (135)
T PF01488_consen 20 AGGAARAVAAALAALGAKEITIVNR 44 (135)
T ss_dssp SSHHHHHHHHHHHHTTSSEEEEEES
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEC
Confidence 579999999999999999 555554
No 391
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A ....
Probab=60.56 E-value=15 Score=31.35 Aligned_cols=24 Identities=25% Similarity=0.331 Sum_probs=22.2
Q ss_pred cHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 71 GHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|..|..+|..+++.|..|+++++.
T Consensus 176 G~SA~d~a~~l~~~g~~V~~~~R~ 199 (203)
T PF13738_consen 176 GNSAVDIAYALAKAGKSVTLVTRS 199 (203)
T ss_dssp SHHHHHHHHHHTTTCSEEEEEESS
T ss_pred hHHHHHHHHHHHhhCCEEEEEecC
Confidence 677999999999999999999985
No 392
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=60.53 E-value=41 Score=30.11 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=29.9
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+..|+|+++ +|.+|.++++.+..+|++|+.+.+.
T Consensus 140 ~~~vlv~g~------------------~~~~g~~~~~~a~~~g~~v~~~~~~ 173 (325)
T TIGR02824 140 GETVLIHGG------------------ASGIGTTAIQLAKAFGARVFTTAGS 173 (325)
T ss_pred CCEEEEEcC------------------cchHHHHHHHHHHHcCCEEEEEeCC
Confidence 489999987 7889999999999999999887763
No 393
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed
Probab=60.48 E-value=25 Score=34.93 Aligned_cols=56 Identities=20% Similarity=0.242 Sum_probs=40.6
Q ss_pred ceEEEecCCcccccC---CCceeeeecC---------------CccHHHHHHHHHHHHCCCeEEEEeeCCCCCC
Q 022803 44 RVACVTSGGTTVPLE---QRCVRYIDNF---------------SSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 99 (292)
Q Consensus 44 k~VLITaG~T~E~ID---~~~VR~ItN~---------------SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P 99 (292)
++++|..|.+.-++. .+.++++++. =.|-.|..+|..|.++|.+|++|.+.....|
T Consensus 138 d~lVIATGs~p~~ipg~~~~~~~~~~~~~~~~~~~~~~~vvIIGgG~ig~E~A~~l~~~G~~Vtlie~~~~il~ 211 (466)
T PRK06115 138 KDIVIATGSEPTPLPGVTIDNQRIIDSTGALSLPEVPKHLVVIGAGVIGLELGSVWRRLGAQVTVVEYLDRICP 211 (466)
T ss_pred CEEEEeCCCCCCCCCCCCCCCCeEECHHHHhCCccCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEeCCCCCCC
Confidence 468888887654432 1256777653 3788999999999999999999987544434
No 394
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=60.44 E-value=42 Score=31.90 Aligned_cols=30 Identities=10% Similarity=0.068 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhhcCCCceEEEeecccCCc
Q 022803 138 IRMLQMIAVSSRSLGPCSMFYLAAAVSDFY 167 (292)
Q Consensus 138 ~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~ 167 (292)
....++...+-+.++.-|.++.+|+..|+-
T Consensus 74 ~Sv~~A~~di~~rf~~ld~iylNAg~~~~~ 103 (341)
T KOG1478|consen 74 QSVFRASKDIKQRFQRLDYIYLNAGIMPNP 103 (341)
T ss_pred HHHHHHHHHHHHHhhhccEEEEccccCCCC
Confidence 444555444455678889999999999873
No 395
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=60.39 E-value=6.7 Score=36.44 Aligned_cols=35 Identities=11% Similarity=0.195 Sum_probs=28.1
Q ss_pred ceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 61 CVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 61 ~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
+++-++=.-.|.||.-||+.++..|+.|.++....
T Consensus 10 ~~~~V~ivGaG~MGSGIAQv~a~sg~~V~l~d~~~ 44 (298)
T KOG2304|consen 10 EIKNVAIVGAGQMGSGIAQVAATSGLNVWLVDANE 44 (298)
T ss_pred cccceEEEcccccchhHHHHHHhcCCceEEecCCH
Confidence 34444444589999999999999999999998753
No 396
>PRK12390 1-aminocyclopropane-1-carboxylate deaminase; Provisional
Probab=60.36 E-value=15 Score=34.92 Aligned_cols=26 Identities=4% Similarity=0.135 Sum_probs=23.4
Q ss_pred CccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 69 SSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 69 SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|+|-+|.++|-++..+|+.++++...
T Consensus 76 s~GN~g~alA~aa~~~G~~~~iv~~~ 101 (337)
T PRK12390 76 VQSNHTRQVAAVAAHLGMKCVLVQEN 101 (337)
T ss_pred CccHHHHHHHHHHHHcCCeEEEEeCC
Confidence 48999999999999999999998743
No 397
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=60.17 E-value=10 Score=35.76 Aligned_cols=25 Identities=28% Similarity=0.290 Sum_probs=23.3
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||.++|..+++.|++|+++.+.
T Consensus 12 ~G~mG~~ia~~L~~~G~~V~~~~r~ 36 (328)
T PRK14618 12 AGAWGTALAVLAASKGVPVRLWARR 36 (328)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 7999999999999999999998874
No 398
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=60.15 E-value=7.8 Score=37.62 Aligned_cols=37 Identities=16% Similarity=0.161 Sum_probs=30.1
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
-+|+|++|||--.|= |+++|+++.++|++|.++-..+
T Consensus 6 ~ki~i~aGgtsGhi~---------------paal~~~l~~~~~~~~~~g~gg 42 (385)
T TIGR00215 6 PTIALVAGEASGDIL---------------GAGLRQQLKEHYPNARFIGVAG 42 (385)
T ss_pred CeEEEEeCCccHHHH---------------HHHHHHHHHhcCCCcEEEEEcc
Confidence 578999998865553 6799999999999998887554
No 399
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=60.02 E-value=10 Score=35.22 Aligned_cols=25 Identities=20% Similarity=0.286 Sum_probs=22.7
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||..||..|+..|++|+++...
T Consensus 12 ~G~mG~~iA~~l~~~G~~V~~~d~~ 36 (295)
T PLN02545 12 AGQMGSGIAQLAAAAGMDVWLLDSD 36 (295)
T ss_pred CCHHHHHHHHHHHhcCCeEEEEeCC
Confidence 6899999999999999999988753
No 400
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=59.97 E-value=46 Score=32.14 Aligned_cols=114 Identities=16% Similarity=0.166 Sum_probs=61.3
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeE--EEEeeCCCCCCccCCCCCccchhhhhcccccce
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAV--IFLYRRGTCEPYCSSLPDDAFLECFEVTEESAV 121 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V--~~i~g~~~~~P~~~~l~~~~~~~~~~~~~~~~i 121 (292)
+++|||+| .|-.|....++++...-+. +.+.-- .|+-.+. .+-.+.+....
T Consensus 1 ~~iLVTGG------------------aGFIGsnfvr~~~~~~~d~~v~~~DkL----TYAgn~~-----~l~~~~~~~~~ 53 (340)
T COG1088 1 MKILVTGG------------------AGFIGSNFVRYILNKHPDDHVVNLDKL----TYAGNLE-----NLADVEDSPRY 53 (340)
T ss_pred CcEEEecC------------------cchHHHHHHHHHHhcCCCceEEEEecc----cccCCHH-----HHHhhhcCCCc
Confidence 57999999 9999999999999988754 544432 2221111 11111111222
Q ss_pred EEeecccccccchhHHHHHHHHHHHHHhhcCCCceEEEeecccCCcCCccccccccccCCCCCceEEEEeCcchhHHHhh
Q 022803 122 QGSSRRPSVEASLYNYIRMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVLRK 201 (292)
Q Consensus 122 ~v~~~~~a~~~tv~dy~~m~~~i~~~l~~~~~~d~~i~aAAVsDf~v~~~~~~~~KI~s~~~~l~l~L~~~PkIl~~i~~ 201 (292)
.+++ ..+.|+..+.+. +.. -+.|+++|=||=|- | +.-|.+....+.=...-|--+|...++
T Consensus 54 ~fv~------~DI~D~~~v~~~----~~~-~~~D~VvhfAAESH--V------DRSI~~P~~Fi~TNv~GT~~LLEaar~ 114 (340)
T COG1088 54 RFVQ------GDICDRELVDRL----FKE-YQPDAVVHFAAESH--V------DRSIDGPAPFIQTNVVGTYTLLEAARK 114 (340)
T ss_pred eEEe------ccccCHHHHHHH----HHh-cCCCeEEEechhcc--c------cccccChhhhhhcchHHHHHHHHHHHH
Confidence 2221 223343444443 332 26799999998764 1 122433322233344555556666666
Q ss_pred cc
Q 022803 202 EW 203 (292)
Q Consensus 202 ~~ 203 (292)
.|
T Consensus 115 ~~ 116 (340)
T COG1088 115 YW 116 (340)
T ss_pred hc
Confidence 66
No 401
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=59.78 E-value=9.7 Score=35.27 Aligned_cols=25 Identities=12% Similarity=0.201 Sum_probs=22.8
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||..+|..++++|++|+++...
T Consensus 9 ~G~mG~~iA~~la~~G~~V~~~d~~ 33 (288)
T PRK09260 9 AGVMGRGIAYVFAVSGFQTTLVDIK 33 (288)
T ss_pred ccHHHHHHHHHHHhCCCcEEEEeCC
Confidence 6899999999999999999988753
No 402
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=59.54 E-value=12 Score=30.80 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=24.0
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
.|.+|..+|-.|.+.|++|+++.++.
T Consensus 6 ~GaiG~~~a~~L~~~g~~V~l~~r~~ 31 (151)
T PF02558_consen 6 AGAIGSLYAARLAQAGHDVTLVSRSP 31 (151)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEESHH
T ss_pred cCHHHHHHHHHHHHCCCceEEEEccc
Confidence 68999999999999999999999864
No 403
>PRK12831 putative oxidoreductase; Provisional
Probab=59.44 E-value=16 Score=36.49 Aligned_cols=34 Identities=24% Similarity=0.503 Sum_probs=28.7
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
+|+|+|-+| |-.|..+|..+.+.|++|+++++..
T Consensus 281 gk~VvVIGg-------------------G~va~d~A~~l~r~Ga~Vtlv~r~~ 314 (464)
T PRK12831 281 GKKVAVVGG-------------------GNVAMDAARTALRLGAEVHIVYRRS 314 (464)
T ss_pred CCeEEEECC-------------------cHHHHHHHHHHHHcCCEEEEEeecC
Confidence 488888877 4568999999999999999999754
No 404
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=59.41 E-value=11 Score=35.01 Aligned_cols=25 Identities=16% Similarity=0.138 Sum_probs=23.0
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||.++|..++..|++|+++...
T Consensus 11 aG~mG~~iA~~la~~G~~V~l~d~~ 35 (287)
T PRK08293 11 AGVLGSQIAFQTAFHGFDVTIYDIS 35 (287)
T ss_pred CCHHHHHHHHHHHhcCCeEEEEeCC
Confidence 7899999999999999999999854
No 405
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=59.34 E-value=11 Score=34.83 Aligned_cols=34 Identities=29% Similarity=0.355 Sum_probs=27.8
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccH-----HHHHHHHHHHHCCCeEEEEeeCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGH-----RGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~-----~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
+.|+|||| -|. +-+.|+.+++++|..|.+|....
T Consensus 3 ~iIVvTSG------------------KGGVGKTTttAnig~aLA~~GkKv~liD~Di 41 (272)
T COG2894 3 RIIVVTSG------------------KGGVGKTTTTANIGTALAQLGKKVVLIDFDI 41 (272)
T ss_pred eEEEEecC------------------CCCcCccchhHHHHHHHHHcCCeEEEEecCc
Confidence 89999999 333 34788889999999999999754
No 406
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=59.16 E-value=19 Score=33.33 Aligned_cols=35 Identities=14% Similarity=0.085 Sum_probs=30.3
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.+.+|||++| +|..|.+.++.+..+|+.|+.+.+.
T Consensus 138 ~g~~VLI~ga------------------~g~vG~~aiqlAk~~G~~Vi~~~~s 172 (325)
T TIGR02825 138 GGETVMVNAA------------------AGAVGSVVGQIAKLKGCKVVGAAGS 172 (325)
T ss_pred CCCEEEEeCC------------------ccHHHHHHHHHHHHcCCEEEEEeCC
Confidence 3489999998 8999999999999999998877654
No 407
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=58.99 E-value=47 Score=33.15 Aligned_cols=59 Identities=20% Similarity=0.172 Sum_probs=38.3
Q ss_pred CCCCCCHHHHHHHHHHHHhcC-CCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 16 APPLNDRAAISQKLKEFIALN-SSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 16 ~~~~~~~~~i~~~~~~~l~~~-~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
++....+-.|.....++..+. .+|++ ++|||-+ -|.||...|.+++..|...++|.+.
T Consensus 152 T~I~~~~VSi~saAv~lA~~~~~~L~~--~~vlvIG-------------------AGem~~lva~~L~~~g~~~i~IaNR 210 (414)
T COG0373 152 TGIGKGAVSISSAAVELAKRIFGSLKD--KKVLVIG-------------------AGEMGELVAKHLAEKGVKKITIANR 210 (414)
T ss_pred cCCCCCccchHHHHHHHHHHHhccccc--CeEEEEc-------------------ccHHHHHHHHHHHhCCCCEEEEEcC
Confidence 343444444444444444321 24655 7777754 4699999999999999888888876
Q ss_pred C
Q 022803 95 G 95 (292)
Q Consensus 95 ~ 95 (292)
+
T Consensus 211 T 211 (414)
T COG0373 211 T 211 (414)
T ss_pred C
Confidence 4
No 408
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=58.98 E-value=19 Score=32.20 Aligned_cols=34 Identities=18% Similarity=0.189 Sum_probs=29.6
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.+|+|+++ +|..|.++++.+..+|+.|+.+.+.
T Consensus 140 ~~~vlv~g~------------------~~~ig~~~~~~~~~~g~~v~~~~~~ 173 (323)
T cd05276 140 GETVLIHGG------------------ASGVGTAAIQLAKALGARVIATAGS 173 (323)
T ss_pred CCEEEEEcC------------------cChHHHHHHHHHHHcCCEEEEEcCC
Confidence 489999988 7889999999999999998777653
No 409
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=58.86 E-value=12 Score=36.47 Aligned_cols=35 Identities=34% Similarity=0.381 Sum_probs=29.5
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCe-EEEEe
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA-VIFLY 92 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~-V~~i~ 92 (292)
+++++|+|||--++= -+.++|++|.++|++ |.++.
T Consensus 1 ~~ivl~~gGTGGHv~--------------pAlAl~~~l~~~g~~~v~~~~ 36 (357)
T COG0707 1 KKIVLTAGGTGGHVF--------------PALALAEELAKRGWEQVIVLG 36 (357)
T ss_pred CeEEEEeCCCccchh--------------HHHHHHHHHHhhCccEEEEec
Confidence 578999999988886 389999999999995 66663
No 410
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=58.78 E-value=17 Score=34.07 Aligned_cols=26 Identities=23% Similarity=0.295 Sum_probs=22.3
Q ss_pred ccHHHHHHHHHHHHCC-CeEEEEeeCC
Q 022803 70 SGHRGAASTEHLIKMG-YAVIFLYRRG 95 (292)
Q Consensus 70 SG~~G~~iAe~~~~~G-a~V~~i~g~~ 95 (292)
.|..|..+|+++++.| .+++++....
T Consensus 38 ~GGVGs~vae~Lar~GVg~itLiD~D~ 64 (268)
T PRK15116 38 IGGVGSWAAEALARTGIGAITLIDMDD 64 (268)
T ss_pred cCHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence 4688999999999999 7899998653
No 411
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=58.77 E-value=17 Score=34.88 Aligned_cols=24 Identities=29% Similarity=0.325 Sum_probs=22.4
Q ss_pred cHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 71 GHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|-.|.++|.+++++|++|+++.+.
T Consensus 9 Gi~Gls~A~~l~~~g~~V~vle~~ 32 (416)
T PRK00711 9 GVIGVTSAWYLAQAGHEVTVIDRQ 32 (416)
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCC
Confidence 688999999999999999999875
No 412
>PRK04148 hypothetical protein; Provisional
Probab=58.50 E-value=25 Score=29.62 Aligned_cols=23 Identities=22% Similarity=0.212 Sum_probs=20.6
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEee
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
.| .|.++|+.+.++|++|+.+.-
T Consensus 25 ~G-fG~~vA~~L~~~G~~ViaIDi 47 (134)
T PRK04148 25 IG-FYFKVAKKLKESGFDVIVIDI 47 (134)
T ss_pred ec-CCHHHHHHHHHCCCEEEEEEC
Confidence 56 789999999999999999985
No 413
>PRK11259 solA N-methyltryptophan oxidase; Provisional
Probab=58.15 E-value=16 Score=34.46 Aligned_cols=24 Identities=33% Similarity=0.332 Sum_probs=22.2
Q ss_pred cHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 71 GHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|-+|.++|-+|+++|++|++|...
T Consensus 12 Gi~G~s~A~~L~~~g~~V~lie~~ 35 (376)
T PRK11259 12 GSMGSAAGYYLARRGLRVLGLDRF 35 (376)
T ss_pred CHHHHHHHHHHHHCCCeEEEEecc
Confidence 688999999999999999999864
No 414
>PLN00106 malate dehydrogenase
Probab=58.05 E-value=50 Score=31.70 Aligned_cols=34 Identities=9% Similarity=-0.053 Sum_probs=28.4
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCC--eEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGY--AVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga--~V~~i~g~ 94 (292)
.+||.||+. +|.-|..+|..+..+|. ++.|+.-.
T Consensus 18 ~~KV~IiGa------------------aG~VG~~~a~~l~~~~~~~el~L~Di~ 53 (323)
T PLN00106 18 GFKVAVLGA------------------AGGIGQPLSLLMKMNPLVSELHLYDIA 53 (323)
T ss_pred CCEEEEECC------------------CCHHHHHHHHHHHhCCCCCEEEEEecC
Confidence 378999987 89999999999997665 68888754
No 415
>PRK14031 glutamate dehydrogenase; Provisional
Probab=57.74 E-value=37 Score=34.17 Aligned_cols=48 Identities=19% Similarity=0.295 Sum_probs=36.8
Q ss_pred HHHHHHHHHhc-CCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEee
Q 022803 25 ISQKLKEFIAL-NSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 25 i~~~~~~~l~~-~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
++..+...+.. +.+++| ++|+|.++ |.-|...|+.+.+.||.|+-|+-
T Consensus 211 v~~~~~~~~~~~g~~l~g--~rVaVQGf-------------------GNVG~~aA~~L~e~GAkVVaVSD 259 (444)
T PRK14031 211 NIYFLMEMLKTKGTDLKG--KVCLVSGS-------------------GNVAQYTAEKVLELGGKVVTMSD 259 (444)
T ss_pred HHHHHHHHHHhcCCCcCC--CEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEEC
Confidence 44455555543 235755 99999876 77899999999999999999885
No 416
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=57.70 E-value=14 Score=34.18 Aligned_cols=25 Identities=24% Similarity=0.381 Sum_probs=23.0
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||..||..++.+|++|+++...
T Consensus 11 aG~mG~~iA~~la~~G~~V~l~d~~ 35 (291)
T PRK06035 11 SGVMGQGIAQVFARTGYDVTIVDVS 35 (291)
T ss_pred ccHHHHHHHHHHHhcCCeEEEEeCC
Confidence 7899999999999999999998764
No 417
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=57.61 E-value=19 Score=34.51 Aligned_cols=34 Identities=18% Similarity=0.221 Sum_probs=27.7
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.|+|||++| |..|..++.++.++|++|+.+...
T Consensus 11 ~~~~ilIiG~-------------------g~~~~~~~~a~~~~G~~v~~~~~~ 44 (395)
T PRK09288 11 SATRVMLLGS-------------------GELGKEVAIEAQRLGVEVIAVDRY 44 (395)
T ss_pred CCCEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3478999865 566888999999999999988864
No 418
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=57.54 E-value=43 Score=29.13 Aligned_cols=24 Identities=21% Similarity=0.169 Sum_probs=19.7
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEee
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
=|+.|..+|+.|..+|+.|+....
T Consensus 31 YG~vG~g~A~~lr~~Ga~V~V~e~ 54 (162)
T PF00670_consen 31 YGKVGKGIARALRGLGARVTVTEI 54 (162)
T ss_dssp -SHHHHHHHHHHHHTT-EEEEE-S
T ss_pred CCcccHHHHHHHhhCCCEEEEEEC
Confidence 579999999999999999998875
No 419
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=57.41 E-value=11 Score=38.25 Aligned_cols=25 Identities=24% Similarity=0.302 Sum_probs=23.0
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||..||..++..|+.|+++...
T Consensus 13 aG~MG~gIA~~la~aG~~V~l~d~~ 37 (503)
T TIGR02279 13 AGAMGAGIAQVAASAGHQVLLYDIR 37 (503)
T ss_pred cCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 6899999999999999999998764
No 420
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=57.28 E-value=36 Score=32.53 Aligned_cols=27 Identities=26% Similarity=0.367 Sum_probs=24.5
Q ss_pred CCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 68 FSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 68 ~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|||-+|.+||-.++.+||.++++.-.
T Consensus 68 ~TSGNTGI~LA~vaa~~Gy~~iivmP~ 94 (300)
T COG0031 68 ATSGNTGIALAMVAAAKGYRLIIVMPE 94 (300)
T ss_pred cCCChHHHHHHHHHHHcCCcEEEEeCC
Confidence 468999999999999999999999954
No 421
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl). E. coli glyoxylate carboligase, plays a key role in glyoxylate metabolism where it catalyzes the condensation of two molecules of glyoxylate to give tartronic semialdehyde and carbon dioxide. This enzyme requires TPP, magnesium ion and FAD as cofactors.
Probab=57.26 E-value=42 Score=29.39 Aligned_cols=70 Identities=14% Similarity=0.051 Sum_probs=44.4
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCc-c----cccC-CCceeeeecCCccHHHHH----HHHHHHHCCCeEE
Q 022803 20 NDRAAISQKLKEFIALNSSESGTRRVACVTSGGT-T----VPLE-QRCVRYIDNFSSGHRGAA----STEHLIKMGYAVI 89 (292)
Q Consensus 20 ~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T-~----E~ID-~~~VR~ItN~SSG~~G~~----iAe~~~~~Ga~V~ 89 (292)
..|+.+...+.+.+ +. ..|+++-+|+ . ..+. ..|-||++....|.||+. |.-.++..+..|+
T Consensus 8 l~~~~~~~~l~~~l------~~--d~iiv~d~G~~~~~~~~~~~~~~~~~~~~~~~~GsmG~~lpaaiGa~la~p~~~vv 79 (202)
T cd02006 8 IKPQRVYEEMNKAF------GR--DVRYVTTIGLSQIAGAQMLHVYKPRHWINCGQAGPLGWTVPAALGVAAADPDRQVV 79 (202)
T ss_pred cCHHHHHHHHHhhC------CC--CeEEEECCcHHHHHHHHhcCcCCCCeEEccCCccchhhhhHHHHhHHhhCCCCeEE
Confidence 46677776666666 22 4555555444 3 2232 126788988778989854 4445555577899
Q ss_pred EEeeCCCC
Q 022803 90 FLYRRGTC 97 (292)
Q Consensus 90 ~i~g~~~~ 97 (292)
.|.|.++.
T Consensus 80 ~i~GDG~f 87 (202)
T cd02006 80 ALSGDYDF 87 (202)
T ss_pred EEEeChHh
Confidence 99998873
No 422
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=56.89 E-value=9.4 Score=36.54 Aligned_cols=25 Identities=24% Similarity=0.319 Sum_probs=22.9
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+|.||..||..++..|++|++....
T Consensus 11 aG~MG~gIA~~~A~~G~~V~l~D~~ 35 (307)
T COG1250 11 AGVMGAGIAAVFALAGYDVVLKDIS 35 (307)
T ss_pred ccchhHHHHHHHhhcCCceEEEeCC
Confidence 6799999999999988999999865
No 423
>TIGR01041 ATP_syn_B_arch ATP synthase archaeal, B subunit. Archaeal ATP synthase shares extensive sequence similarity with eukaryotic and prokaryotic V-type (H+)-ATPases.
Probab=56.37 E-value=22 Score=35.91 Aligned_cols=43 Identities=14% Similarity=0.158 Sum_probs=33.8
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHH-HCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLI-KMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~-~~Ga~V~~i~g~ 94 (292)
+.|+|.+-...-|+. |+ .+..+|.++||+|+ .+|.+|.++.-.
T Consensus 203 rtvvv~atsd~p~~~----R~----~a~~~a~tiAEyfr~d~G~~VLli~Ds 246 (458)
T TIGR01041 203 RAVVFLNLADDPAVE----RI----VTPRMALTAAEYLAFEKDMHVLVILTD 246 (458)
T ss_pred eEEEEEECCCCCHHH----HH----HHHHHHHHHHHHHHHccCCcEEEEEcC
Confidence 777777776666665 22 36789999999999 799999999854
No 424
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=56.16 E-value=17 Score=33.89 Aligned_cols=25 Identities=16% Similarity=0.328 Sum_probs=22.9
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||.+||..++..|++|+++...
T Consensus 12 aG~mG~~iA~~l~~~g~~V~~~d~~ 36 (311)
T PRK06130 12 AGTMGSGIAALFARKGLQVVLIDVM 36 (311)
T ss_pred CCHHHHHHHHHHHhCCCeEEEEECC
Confidence 7999999999999999999998753
No 425
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=56.06 E-value=13 Score=34.05 Aligned_cols=25 Identities=28% Similarity=0.369 Sum_probs=23.3
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.+|..+|..|.+.|++|+++.+.
T Consensus 8 ~G~~G~~~a~~L~~~g~~V~~~~r~ 32 (304)
T PRK06522 8 AGAIGGLFGAALAQAGHDVTLVARR 32 (304)
T ss_pred CCHHHHHHHHHHHhCCCeEEEEECC
Confidence 6899999999999999999999974
No 426
>PF00208 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; InterPro: IPR006096 Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction. Glutamate dehydrogenases (1.4.1.2 from EC, 1.4.1.3 from EC, and 1.4.1.4 from EC) (GluDH) are enzymes that catalyse the NAD- and/or NADP-dependent reversible deamination of L-glutamate into alpha-ketoglutarate [, ]. GluDH isozymes are generally involved with either ammonia assimilation or glutamate catabolism. Two separate enzymes are present in yeasts: the NADP-dependent enzyme, which catalyses the amination of alpha-ketoglutarate to L-glutamate; and the NAD-dependent enzyme, which catalyses the reverse reaction [] - this form links the L-amino acids with the Krebs cycle, which provides a major pathway for metabolic interconversion of alpha-amino acids and alpha- keto acids []. Leucine dehydrogenase (1.4.1.9 from EC) (LeuDH) is a NAD-dependent enzyme that catalyses the reversible deamination of leucine and several other aliphatic amino acids to their keto analogues []. Each subunit of this octameric enzyme from Bacillus sphaericus contains 364 amino acids and folds into two domains, separated by a deep cleft. The nicotinamide ring of the NAD+ cofactor binds deep in this cleft, which is thought to close during the hydride transfer step of the catalytic cycle. Phenylalanine dehydrogenase (1.4.1.20 from EC) (PheDH) is na NAD-dependent enzyme that catalyses the reversible deamidation of L-phenylalanine into phenyl-pyruvate []. Valine dehydrogenase (1.4.1.8 from EC) (ValDH) is an NADP-dependent enzyme that catalyses the reversible deamidation of L-valine into 3-methyl-2-oxobutanoate []. This entry represents the C-terminal domain of these proteins.; GO: 0016491 oxidoreductase activity, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process; PDB: 1LEH_A 3AOG_D 3AOE_A 2YFQ_B 2YFH_B 1HRD_A 1K89_A 1AUP_A 1BGV_A 1B26_C ....
Probab=55.93 E-value=28 Score=32.04 Aligned_cols=24 Identities=21% Similarity=0.375 Sum_probs=22.0
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEee
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
.|..|...|+.+.++|+.|+-++-
T Consensus 40 fG~VG~~~a~~l~~~Ga~vv~vsD 63 (244)
T PF00208_consen 40 FGNVGSHAARFLAELGAKVVAVSD 63 (244)
T ss_dssp SSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHcCCEEEEEec
Confidence 799999999999999999988864
No 427
>PRK06370 mercuric reductase; Validated
Probab=55.81 E-value=24 Score=34.87 Aligned_cols=30 Identities=20% Similarity=0.255 Sum_probs=25.4
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCCCCCC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRGTCEP 99 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P 99 (292)
.|-.|..+|..+.++|.+|+++.+.....|
T Consensus 179 gG~~g~E~A~~l~~~G~~Vtli~~~~~~l~ 208 (463)
T PRK06370 179 GGYIGLEFAQMFRRFGSEVTVIERGPRLLP 208 (463)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEEcCCCCCc
Confidence 688899999999999999999997654433
No 428
>PLN02618 tryptophan synthase, beta chain
Probab=55.74 E-value=21 Score=35.47 Aligned_cols=27 Identities=19% Similarity=0.353 Sum_probs=25.1
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCCC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRGT 96 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~~ 96 (292)
+|..|.++|-+++..|.+++++.+..+
T Consensus 128 aGNhG~AlA~aaa~~Gl~~~I~m~~~~ 154 (410)
T PLN02618 128 AGQHGVATATVCARFGLECIVYMGAQD 154 (410)
T ss_pred cHHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 999999999999999999999998753
No 429
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=55.60 E-value=24 Score=32.29 Aligned_cols=34 Identities=18% Similarity=0.093 Sum_probs=30.0
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+..|||++| +|..|.++++.+..+|+.|+.+.+.
T Consensus 144 g~~vlI~ga------------------~g~vG~~aiqlA~~~G~~vi~~~~s 177 (329)
T cd08294 144 GETVVVNGA------------------AGAVGSLVGQIAKIKGCKVIGCAGS 177 (329)
T ss_pred CCEEEEecC------------------ccHHHHHHHHHHHHcCCEEEEEeCC
Confidence 489999999 8999999999999999998877754
No 430
>TIGR01274 ACC_deam 1-aminocyclopropane-1-carboxylate deaminase. This pyridoxal phosphate-dependent enzyme degrades 1-aminocyclopropane-1-carboxylate, which in plants is a precursor of the ripening hormone ethylene, to ammonia and alpha-ketoglutarate. This model includes all members of this family for which function has been demonstrated experimentally, but excludes a closely related family often annotated as putative members of this family.
Probab=55.53 E-value=20 Score=34.13 Aligned_cols=35 Identities=11% Similarity=0.227 Sum_probs=29.9
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
...|+|+|| |+|-.|.++|-++...|..++++..+
T Consensus 66 ~~~vvs~gg----------------s~gN~g~alA~~a~~~Gl~~~iv~~~ 100 (337)
T TIGR01274 66 CTTLVSIGG----------------IQSNQTRQVAAVAAHLGMKCVLVQEN 100 (337)
T ss_pred CCEEEECCC----------------CcchHHHHHHHHHHHcCCcEEEEecc
Confidence 667778764 47899999999999999999988865
No 431
>PRK13802 bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta; Provisional
Probab=55.41 E-value=18 Score=38.43 Aligned_cols=27 Identities=15% Similarity=0.228 Sum_probs=25.1
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCCC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRGT 96 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~~ 96 (292)
||..|.++|-+++..|..++++.+..+
T Consensus 388 sGNhG~AlA~aaA~~Gl~c~Ivmp~~~ 414 (695)
T PRK13802 388 AGQHGVATATVCAMLGLKCRIYMGQID 414 (695)
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 999999999999999999999998753
No 432
>cd01135 V_A-ATPase_B V/A-type ATP synthase (non-catalytic) subunit B. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi apparatus and in other coated vesicles in eukaryotes. Archaea have a protein which is similar in sequence to V-ATPases, but functions like an F-ATPase (called A-ATPase). A similar protein is also found in a few bacteria. This subfamily consists of the non-catalytic beta subunit.
Probab=55.23 E-value=22 Score=33.61 Aligned_cols=43 Identities=21% Similarity=0.229 Sum_probs=33.3
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHC-CCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-GYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~-Ga~V~~i~g~ 94 (292)
+.|+|.+-.-.-|+. |++ ...+|.++||+|+.+ |.+|.++.-.
T Consensus 131 ~tv~v~~t~~~~~~~----r~~----a~~~a~aiAEyfrd~~g~~VLl~~D~ 174 (276)
T cd01135 131 RVVLFLNLANDPTIE----RII----TPRMALTTAEYLAYEKGKHVLVILTD 174 (276)
T ss_pred eEEEEEecCCCCHHH----HHH----HHHHHHHHHHHHHhccCCeEEEEEcC
Confidence 677777766665554 333 678899999999997 9999999854
No 433
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=55.06 E-value=24 Score=31.71 Aligned_cols=34 Identities=24% Similarity=0.178 Sum_probs=30.2
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.+|+|+++ +|.+|.++++.+..+|+.|+.+.+.
T Consensus 145 ~~~vli~g~------------------~~~~g~~~~~~~~~~g~~v~~~~~~ 178 (328)
T cd08268 145 GDSVLITAA------------------SSSVGLAAIQIANAAGATVIATTRT 178 (328)
T ss_pred CCEEEEecC------------------ccHHHHHHHHHHHHcCCEEEEEcCC
Confidence 488999988 7899999999999999999888764
No 434
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=55.04 E-value=22 Score=31.98 Aligned_cols=37 Identities=22% Similarity=0.248 Sum_probs=30.8
Q ss_pred CCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 38 SESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 38 ~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
++.| |+|||.+| |.-|..=|+-|+..|+.|++++-..
T Consensus 9 ~l~~--k~VlvvGg-------------------G~va~rKa~~ll~~ga~v~Vvs~~~ 45 (210)
T COG1648 9 DLEG--KKVLVVGG-------------------GSVALRKARLLLKAGADVTVVSPEF 45 (210)
T ss_pred EcCC--CEEEEECC-------------------CHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 4555 99999998 5668888999999999999999653
No 435
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Probab=54.96 E-value=24 Score=34.15 Aligned_cols=26 Identities=15% Similarity=0.091 Sum_probs=22.3
Q ss_pred cHHHHHHHHHHHHCCCeEEEEeeCCC
Q 022803 71 GHRGAASTEHLIKMGYAVIFLYRRGT 96 (292)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~g~~~ 96 (292)
|-.|..+|..+.++|.+|++|.....
T Consensus 153 G~ig~E~A~~l~~~g~~Vtlv~~~~~ 178 (396)
T PRK09754 153 GTIGLELAASATQRRCKVTVIELAAT 178 (396)
T ss_pred CHHHHHHHHHHHHcCCeEEEEecCCc
Confidence 56799999999999999999987543
No 436
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=54.72 E-value=24 Score=32.16 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=29.2
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
++++|||-+| |.-|..=++.|+..||+|++|+-.
T Consensus 24 ~~~~VLVVGG-------------------G~VA~RK~~~Ll~~gA~VtVVap~ 57 (223)
T PRK05562 24 NKIKVLIIGG-------------------GKAAFIKGKTFLKKGCYVYILSKK 57 (223)
T ss_pred CCCEEEEECC-------------------CHHHHHHHHHHHhCCCEEEEEcCC
Confidence 4499999998 566888889999999999999854
No 437
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=54.38 E-value=15 Score=34.05 Aligned_cols=25 Identities=28% Similarity=0.314 Sum_probs=23.1
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||..+|..+++.|++|+++.+.
T Consensus 9 ~G~mG~~~a~~L~~~g~~V~~~~r~ 33 (325)
T PRK00094 9 AGSWGTALAIVLARNGHDVTLWARD 33 (325)
T ss_pred CCHHHHHHHHHHHhCCCEEEEEECC
Confidence 7999999999999999999988764
No 438
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=54.23 E-value=21 Score=34.34 Aligned_cols=25 Identities=28% Similarity=0.478 Sum_probs=22.6
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|-.|.++|.+|+++|++|+++.+.
T Consensus 9 aG~~G~~~A~~La~~g~~V~vle~~ 33 (410)
T PRK12409 9 AGITGVTTAYALAQRGYQVTVFDRH 33 (410)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3688999999999999999999864
No 439
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed
Probab=54.22 E-value=40 Score=34.39 Aligned_cols=51 Identities=16% Similarity=0.173 Sum_probs=44.0
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCCCCCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 99 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P 99 (292)
..++|++|.| +|..=-|.|+-+=-++..+++++..+|.+|.||++....-|
T Consensus 23 ~~~~~~~g~~-----psG~~HiG~~~e~~~~d~v~r~lr~~G~~v~~i~~~Dd~d~ 73 (510)
T PRK00750 23 PPVVVETGIG-----PSGLPHIGNFREVARTDMVRRALRDLGIKTRLIFFSDDMDG 73 (510)
T ss_pred CcEEEEeCCC-----CCCCcccccccchhhHHHHHHHHHHcCCcEEEEEEEecCCc
Confidence 3599999975 56888999999999999999999999999999999765433
No 440
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=54.11 E-value=24 Score=33.04 Aligned_cols=25 Identities=32% Similarity=0.517 Sum_probs=23.4
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.+|..+|-.+.+.|++|+++.+.
T Consensus 13 ~GaiG~~lA~~L~~~g~~V~~~~r~ 37 (313)
T PRK06249 13 TGAIGGFYGAMLARAGFDVHFLLRS 37 (313)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEeC
Confidence 7899999999999999999999874
No 441
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric. This protein is homologous to the small subunit of NADPH and NADH forms of glutamate synthase as found in eukaryotes and some bacteria. This protein is found in numerous species having no homolog of the glutamate synthase large subunit. The prototype of the family, from Pyrococcus sp. KOD1, was shown to be active as a homotetramer and to require NADPH.
Probab=53.99 E-value=23 Score=35.06 Aligned_cols=25 Identities=32% Similarity=0.571 Sum_probs=22.0
Q ss_pred cHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 71 GHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
|-.|...|..+.+.|++|+++++..
T Consensus 281 G~~a~d~A~~l~~~G~~Vtlv~~~~ 305 (449)
T TIGR01316 281 GNTAVDSARTALRLGAEVHCLYRRT 305 (449)
T ss_pred CHHHHHHHHHHHHcCCEEEEEeecC
Confidence 4669999999999999999999864
No 442
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=53.99 E-value=60 Score=29.37 Aligned_cols=34 Identities=18% Similarity=0.111 Sum_probs=29.7
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+..|||++| +|..|.++++.+...|+.|+++.+.
T Consensus 167 ~~~vlI~g~------------------~~~iG~~~~~~~~~~g~~v~~~~~~ 200 (342)
T cd08266 167 GETVLVHGA------------------GSGVGSAAIQIAKLFGATVIATAGS 200 (342)
T ss_pred CCEEEEECC------------------CchHHHHHHHHHHHcCCEEEEEeCC
Confidence 489999988 7889999999999999999877653
No 443
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=53.91 E-value=14 Score=34.07 Aligned_cols=24 Identities=21% Similarity=0.350 Sum_probs=22.4
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEee
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
.|.||..+|..++.+|++|+++..
T Consensus 11 ~G~mG~~ia~~la~~g~~V~~~d~ 34 (282)
T PRK05808 11 AGTMGNGIAQVCAVAGYDVVMVDI 34 (282)
T ss_pred cCHHHHHHHHHHHHCCCceEEEeC
Confidence 789999999999999999999874
No 444
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=53.89 E-value=56 Score=25.38 Aligned_cols=24 Identities=25% Similarity=0.223 Sum_probs=19.0
Q ss_pred ccHHHHHHHHHHHHCCCe-EEEEee
Q 022803 70 SGHRGAASTEHLIKMGYA-VIFLYR 93 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~-V~~i~g 93 (292)
+|.+....+..|...|+. |.++.|
T Consensus 87 ~g~~s~~~~~~l~~~G~~~v~~l~G 111 (118)
T cd01449 87 SGVTACVLLLALELLGYKNVRLYDG 111 (118)
T ss_pred cHHHHHHHHHHHHHcCCCCeeeeCC
Confidence 677888889999999995 666654
No 445
>cd01133 F1-ATPase_beta F1 ATP synthase beta subunit, nucleotide-binding domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta and epsilon subunits with a stoichiometry of 3:3:1:1:1. The beta subunit of ATP synthase is catalytic.
Probab=53.52 E-value=28 Score=32.77 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=33.3
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHC-CCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-GYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~-Ga~V~~i~g~ 94 (292)
+.|+|.+-...-|.. -+ .+..+|.++||+|... |.+|.++.-.
T Consensus 128 ~tvvv~~t~d~~~~~--r~------~~~~~a~~~AEyfr~~~g~~Vl~~~Ds 171 (274)
T cd01133 128 KTALVYGQMNEPPGA--RA------RVALTGLTMAEYFRDEEGQDVLLFIDN 171 (274)
T ss_pred eeEEEEECCCCCHHH--HH------HHHHHHHHHHHHHHHhcCCeEEEEEeC
Confidence 677777776665655 22 2568999999999998 9999999864
No 446
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=53.37 E-value=14 Score=34.10 Aligned_cols=25 Identities=24% Similarity=0.271 Sum_probs=22.4
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||..+|..+++.|++|+.+.+.
T Consensus 7 ~G~mG~~iA~~l~~~G~~V~~~dr~ 31 (291)
T TIGR01505 7 LGIMGSPMSINLAKAGYQLHVTTIG 31 (291)
T ss_pred ecHHHHHHHHHHHHCCCeEEEEcCC
Confidence 7999999999999999999977643
No 447
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed
Probab=53.07 E-value=26 Score=34.89 Aligned_cols=30 Identities=17% Similarity=0.114 Sum_probs=25.7
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCCCCCC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRGTCEP 99 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P 99 (292)
.|-.|..+|..|..+|.+|++|.......|
T Consensus 182 gG~iG~E~A~~l~~~G~~Vtlv~~~~~il~ 211 (471)
T PRK06467 182 GGIIGLEMGTVYHRLGSEVDVVEMFDQVIP 211 (471)
T ss_pred CCHHHHHHHHHHHHcCCCEEEEecCCCCCC
Confidence 688999999999999999999987654444
No 448
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=53.04 E-value=16 Score=34.43 Aligned_cols=25 Identities=24% Similarity=0.166 Sum_probs=23.0
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||.++|..+.+.|++|+++.+.
T Consensus 8 aGa~G~ala~~L~~~g~~V~l~~r~ 32 (326)
T PRK14620 8 AGSFGTAIAIALSSKKISVNLWGRN 32 (326)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEecC
Confidence 6899999999999999999988874
No 449
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=52.85 E-value=27 Score=31.97 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=30.1
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+..|||++| +|..|.++++.+..+|+.|+.+.+.
T Consensus 146 ~~~vlI~g~------------------~g~ig~~~~~~a~~~G~~vi~~~~~ 179 (329)
T cd05288 146 GETVVVSAA------------------AGAVGSVVGQIAKLLGARVVGIAGS 179 (329)
T ss_pred CCEEEEecC------------------cchHHHHHHHHHHHcCCEEEEEeCC
Confidence 489999988 8899999999999999999888753
No 450
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed
Probab=52.78 E-value=28 Score=34.23 Aligned_cols=30 Identities=17% Similarity=0.166 Sum_probs=25.5
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCCCCCC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRGTCEP 99 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P 99 (292)
.|-.|..+|..|.++|.+|+++.+.....|
T Consensus 180 gG~~g~E~A~~l~~~g~~Vtli~~~~~~l~ 209 (462)
T PRK06416 180 GGYIGVEFASAYASLGAEVTIVEALPRILP 209 (462)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEEcCCCcCC
Confidence 688999999999999999999997654434
No 451
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=52.71 E-value=15 Score=38.92 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=31.0
Q ss_pred CceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 60 RCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 60 ~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.+||-|.=-=.|.||..||..|+..|+.|+++...
T Consensus 311 ~~i~~v~ViGaG~mG~gIA~~~a~~G~~V~l~d~~ 345 (714)
T TIGR02437 311 KDVKQAAVLGAGIMGGGIAYQSASKGTPIVMKDIN 345 (714)
T ss_pred cccceEEEECCchHHHHHHHHHHhCCCeEEEEeCC
Confidence 36777777789999999999999999999999864
No 452
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=52.52 E-value=28 Score=31.74 Aligned_cols=34 Identities=24% Similarity=0.190 Sum_probs=30.5
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+..|||.+| +|..|.++++.+..+|+.|+.+.+.
T Consensus 140 g~~vlI~g~------------------~g~ig~~~~~~a~~~G~~v~~~~~~ 173 (324)
T cd08292 140 GQWLIQNAA------------------GGAVGKLVAMLAAARGINVINLVRR 173 (324)
T ss_pred CCEEEEccc------------------ccHHHHHHHHHHHHCCCeEEEEecC
Confidence 489999988 8999999999999999999888764
No 453
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=52.39 E-value=17 Score=33.58 Aligned_cols=25 Identities=28% Similarity=0.256 Sum_probs=22.8
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||.++|.++.++|++|+.+...
T Consensus 8 ~G~mG~sla~~L~~~g~~V~~~d~~ 32 (279)
T PRK07417 8 LGLIGGSLGLDLRSLGHTVYGVSRR 32 (279)
T ss_pred ecHHHHHHHHHHHHCCCEEEEEECC
Confidence 7999999999999999999888753
No 454
>PRK04196 V-type ATP synthase subunit B; Provisional
Probab=52.31 E-value=29 Score=35.03 Aligned_cols=43 Identities=16% Similarity=0.199 Sum_probs=32.5
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHH-HCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLI-KMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~-~~Ga~V~~i~g~ 94 (292)
+.|+|-+-...-++. |+ .+..+|.++||+|+ .+|.+|.++.-.
T Consensus 205 rtvvV~atsd~p~~~----R~----~a~~~a~tiAEyfr~d~G~~VLli~Ds 248 (460)
T PRK04196 205 RSVVFLNLADDPAIE----RI----LTPRMALTAAEYLAFEKGMHVLVILTD 248 (460)
T ss_pred eEEEEEEcCCCCHHH----HH----HHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 667776665555554 32 26789999999999 799999999854
No 455
>PLN03049 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=52.30 E-value=24 Score=35.64 Aligned_cols=35 Identities=26% Similarity=0.428 Sum_probs=30.0
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEee
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
++|+|=+|+-. .|.=|..+|+.|+.+|++|+++.-
T Consensus 60 ~~VlVlcG~GN---------------NGGDGlv~AR~L~~~G~~V~v~~~ 94 (462)
T PLN03049 60 RRVLALCGPGN---------------NGGDGLVAARHLHHFGYKPSICYP 94 (462)
T ss_pred CEEEEEECCCC---------------CHHHHHHHHHHHHHCCCceEEEEE
Confidence 67989888553 788899999999999999988763
No 456
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=52.13 E-value=16 Score=33.82 Aligned_cols=25 Identities=24% Similarity=0.278 Sum_probs=22.4
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||.++|+.+++.|++|+.+.+.
T Consensus 4 lG~mG~~mA~~L~~~G~~V~v~dr~ 28 (288)
T TIGR01692 4 LGNMGGPMAANLLKAGHPVRVFDLF 28 (288)
T ss_pred ccHhHHHHHHHHHhCCCeEEEEeCC
Confidence 7999999999999999999887653
No 457
>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC). P. putida BFDC plays a role in the mandelate pathway, catalyzing the conversion of benzoylformate to benzaldehyde and carbon dioxide. This enzyme is dependent on TPP and a divalent metal cation as cofactors.
Probab=52.11 E-value=51 Score=27.92 Aligned_cols=35 Identities=14% Similarity=0.067 Sum_probs=27.4
Q ss_pred ceeeeecCCccHHHHHHHHHHH----HCCCeEEEEeeCCC
Q 022803 61 CVRYIDNFSSGHRGAASTEHLI----KMGYAVIFLYRRGT 96 (292)
Q Consensus 61 ~VR~ItN~SSG~~G~~iAe~~~----~~Ga~V~~i~g~~~ 96 (292)
|-||+++.+ |.||+++.-+.- ..+..|+.+.|.++
T Consensus 40 ~~~~~~~~~-g~mG~~lp~aiGaala~~~~~vv~i~GDG~ 78 (178)
T cd02002 40 PGSYFTLRG-GGLGWGLPAAVGAALANPDRKVVAIIGDGS 78 (178)
T ss_pred CCCeeccCC-ccccchHHHHHHHHhcCCCCeEEEEEcCch
Confidence 789999988 999987766543 33667999999776
No 458
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=52.04 E-value=25 Score=34.63 Aligned_cols=27 Identities=19% Similarity=0.201 Sum_probs=23.3
Q ss_pred cHHHHHHHHHHHHCCCeEEEEeeCCCC
Q 022803 71 GHRGAASTEHLIKMGYAVIFLYRRGTC 97 (292)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~g~~~~ 97 (292)
|-.|..+|..|.++|.+|+++++....
T Consensus 157 G~ig~E~A~~l~~~g~~Vtli~~~~~l 183 (438)
T PRK13512 157 GYISLEVLENLYERGLHPTLIHRSDKI 183 (438)
T ss_pred CHHHHHHHHHHHhCCCcEEEEeccccc
Confidence 567999999999999999999975443
No 459
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=52.01 E-value=22 Score=32.90 Aligned_cols=25 Identities=20% Similarity=0.274 Sum_probs=23.1
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||..||..++.+|++|+++...
T Consensus 12 aG~mG~~iA~~la~~G~~V~l~d~~ 36 (292)
T PRK07530 12 AGQMGNGIAHVCALAGYDVLLNDVS 36 (292)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 7899999999999999999998864
No 460
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=51.95 E-value=19 Score=36.61 Aligned_cols=25 Identities=24% Similarity=0.355 Sum_probs=23.1
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||..||..++..|++|+++...
T Consensus 15 aG~MG~gIA~~la~aG~~V~l~D~~ 39 (507)
T PRK08268 15 AGAMGAGIAQVAAQAGHTVLLYDAR 39 (507)
T ss_pred CCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 7899999999999999999998764
No 461
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=51.93 E-value=15 Score=34.51 Aligned_cols=25 Identities=24% Similarity=0.275 Sum_probs=23.4
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||..+|..++++|++|+++.+.
T Consensus 10 ~G~mG~~~A~~L~~~G~~V~~~~r~ 34 (341)
T PRK08229 10 AGSIGCYLGGRLAAAGADVTLIGRA 34 (341)
T ss_pred CCHHHHHHHHHHHhcCCcEEEEecH
Confidence 7999999999999999999999864
No 462
>PRK12266 glpD glycerol-3-phosphate dehydrogenase; Reviewed
Probab=51.80 E-value=20 Score=36.18 Aligned_cols=24 Identities=21% Similarity=0.306 Sum_probs=22.2
Q ss_pred cHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 71 GHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|-.|.++|.+++++|..|++|-..
T Consensus 15 Gi~G~~~A~~la~rGl~V~LvEk~ 38 (508)
T PRK12266 15 GINGAGIARDAAGRGLSVLLCEQD 38 (508)
T ss_pred CHHHHHHHHHHHHCCCeEEEEecC
Confidence 688999999999999999999964
No 463
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=51.61 E-value=27 Score=33.05 Aligned_cols=34 Identities=18% Similarity=0.055 Sum_probs=29.7
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.+|||+++ +|..|...++.+..+|+.|+.+.+.
T Consensus 159 g~~VlV~Ga------------------aG~vG~~aiqlAk~~G~~Vi~~~~~ 192 (348)
T PLN03154 159 GDSVFVSAA------------------SGAVGQLVGQLAKLHGCYVVGSAGS 192 (348)
T ss_pred CCEEEEecC------------------ccHHHHHHHHHHHHcCCEEEEEcCC
Confidence 489999999 8999999999999999998877653
No 464
>PRK06936 type III secretion system ATPase; Provisional
Probab=51.51 E-value=20 Score=35.95 Aligned_cols=43 Identities=19% Similarity=0.274 Sum_probs=32.5
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.|+|.+=.-.-|+. |+ .+..+|.++||+|+.+|.+|.++.-.
T Consensus 218 rtvvv~atsd~p~~~----R~----~a~~~a~tiAEyfrd~G~~Vll~~Ds 260 (439)
T PRK06936 218 KAVLVVATSDRPSME----RA----KAGFVATSIAEYFRDQGKRVLLLMDS 260 (439)
T ss_pred eeEEEEECCCCCHHH----HH----HHHHHHHHHHHHHHHcCCCEEEeccc
Confidence 667776665555554 22 26778999999999999999999854
No 465
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of animals, yeast, and a number of animal-resident bacteria.
Probab=51.49 E-value=29 Score=34.35 Aligned_cols=27 Identities=15% Similarity=0.160 Sum_probs=24.2
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCCC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRGT 96 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~~ 96 (292)
.|-.|..+|..|...|.+|++|++...
T Consensus 174 gG~iG~E~A~~l~~~g~~Vtli~~~~~ 200 (450)
T TIGR01421 174 AGYIAVELAGVLHGLGSETHLVIRHER 200 (450)
T ss_pred CCHHHHHHHHHHHHcCCcEEEEecCCC
Confidence 688999999999999999999997544
No 466
>PRK07846 mycothione reductase; Reviewed
Probab=51.17 E-value=31 Score=34.18 Aligned_cols=28 Identities=21% Similarity=0.285 Sum_probs=24.8
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCCCC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRGTC 97 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~~~ 97 (292)
.|-.|..+|..|.++|.+|+++.+....
T Consensus 174 gG~iG~E~A~~l~~~G~~Vtli~~~~~l 201 (451)
T PRK07846 174 GGFIAAEFAHVFSALGVRVTVVNRSGRL 201 (451)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 6889999999999999999999976544
No 467
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional
Probab=51.09 E-value=32 Score=33.81 Aligned_cols=30 Identities=17% Similarity=0.252 Sum_probs=25.9
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCCCCCC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRGTCEP 99 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~~~~P 99 (292)
+|-.|.++|..|..+|.+|+++.+.....|
T Consensus 183 gG~~g~E~A~~l~~~g~~Vtli~~~~~~l~ 212 (461)
T PRK05249 183 AGVIGCEYASIFAALGVKVTLINTRDRLLS 212 (461)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEecCCCcCC
Confidence 788999999999999999999997655444
No 468
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=51.08 E-value=29 Score=30.27 Aligned_cols=33 Identities=21% Similarity=0.187 Sum_probs=28.6
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.+|||+++ +| +|.++++.+...|+.|+.+.+.
T Consensus 135 ~~~vli~g~------------------~~-~G~~~~~~a~~~g~~v~~~~~~ 167 (271)
T cd05188 135 GDTVLVLGA------------------GG-VGLLAAQLAKAAGARVIVTDRS 167 (271)
T ss_pred CCEEEEECC------------------CH-HHHHHHHHHHHcCCeEEEEcCC
Confidence 489999988 66 9999999999999999888754
No 469
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=50.95 E-value=48 Score=31.46 Aligned_cols=56 Identities=20% Similarity=0.088 Sum_probs=43.7
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 17 PPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 17 ~~~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
.+|-.|.-|..-+..+- .++.| |+|+|-+. |.--|.=+|..++.+||.||+.|..+
T Consensus 135 ~~PCTp~gi~~ll~~~~---i~l~G--k~~vVVGr------------------S~iVGkPla~lL~~~naTVtvcHs~T 190 (283)
T COG0190 135 FLPCTPAGIMTLLEEYG---IDLRG--KNVVVVGR------------------SNIVGKPLALLLLNANATVTVCHSRT 190 (283)
T ss_pred CCCCCHHHHHHHHHHhC---CCCCC--CEEEEECC------------------CCcCcHHHHHHHHhCCCEEEEEcCCC
Confidence 45677887775554333 36755 99999888 67779999999999999999999864
No 470
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=50.71 E-value=66 Score=28.97 Aligned_cols=25 Identities=20% Similarity=0.198 Sum_probs=22.6
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.-|..+|+.+.++|+.|+.+.-.
T Consensus 31 fGnVG~~~a~~L~~~G~~vV~vsD~ 55 (217)
T cd05211 31 LGNVGWGLAKKLAEEGGKVLAVSDP 55 (217)
T ss_pred CCHHHHHHHHHHHHcCCEEEEEEcC
Confidence 7899999999999999998888854
No 471
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=50.56 E-value=1.5e+02 Score=28.63 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=28.2
Q ss_pred CCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCC-CeEEEEeeC
Q 022803 42 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG-YAVIFLYRR 94 (292)
Q Consensus 42 ~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~G-a~V~~i~g~ 94 (292)
.|+.|||.+| ||.-|.+..+-+...| ..|+-.++.
T Consensus 157 ~g~~vLv~gg------------------sggVG~~aiQlAk~~~~~~v~t~~s~ 192 (347)
T KOG1198|consen 157 KGKSVLVLGG------------------SGGVGTAAIQLAKHAGAIKVVTACSK 192 (347)
T ss_pred CCCeEEEEeC------------------CcHHHHHHHHHHHhcCCcEEEEEccc
Confidence 4589999999 9999999999999999 445555443
No 472
>PRK08972 fliI flagellum-specific ATP synthase; Validated
Probab=50.54 E-value=25 Score=35.42 Aligned_cols=43 Identities=23% Similarity=0.303 Sum_probs=32.0
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.|+|-+-.-.-|.. |+. ...+|.++||+|+.+|.+|.++.-.
T Consensus 218 rtvvv~atsd~p~~~----R~~----a~~~A~tiAEyfrd~G~~VLl~~Ds 260 (444)
T PRK08972 218 RSVVVAAPADTSPLM----RLK----GCETATTIAEYFRDQGLNVLLLMDS 260 (444)
T ss_pred cEEEEEECCCCCHHH----HHH----HHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 666666554444544 332 7789999999999999999999854
No 473
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=50.29 E-value=26 Score=32.78 Aligned_cols=36 Identities=17% Similarity=0.281 Sum_probs=30.7
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
...+||+|+ |||-+|.++|-++..+|+.++++....
T Consensus 56 ~~~vv~~g~----------------ssGN~g~alA~~a~~~G~~~~ivvp~~ 91 (311)
T TIGR01275 56 ADTVITVGA----------------IQSNHARATALAAKKLGLDAVLVLREK 91 (311)
T ss_pred CCEEEEcCC----------------chhHHHHHHHHHHHHhCCceEEEecCC
Confidence 567788873 479999999999999999999999763
No 474
>PRK03910 D-cysteine desulfhydrase; Validated
Probab=50.18 E-value=27 Score=33.13 Aligned_cols=27 Identities=11% Similarity=0.249 Sum_probs=24.4
Q ss_pred CccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 69 SSGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 69 SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
|+|-.|.++|-++...|+.++++....
T Consensus 73 s~gN~g~alA~~a~~~G~~~~i~vp~~ 99 (331)
T PRK03910 73 IQSNHARQTAAAAAKLGLKCVLLLENP 99 (331)
T ss_pred chhHHHHHHHHHHHHhCCcEEEEEcCC
Confidence 479999999999999999999998764
No 475
>TIGR03324 alt_F1F0_F1_al alternate F1F0 ATPase, F1 subunit alpha. A small number of taxonomically diverse prokaryotic species, including Methanosarcina barkeri, have what appears to be a second ATP synthase, in addition to the normal F1F0 ATPase in bacteria and A1A0 ATPase in archaea. These enzymes use ion gradients to synthesize ATP, and in principle may run in either direction. This model represents the F1 alpha subunit of this apparent second ATP synthase.
Probab=50.14 E-value=29 Score=35.48 Aligned_cols=43 Identities=23% Similarity=0.400 Sum_probs=33.9
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.|+|.+-...-|.. |++ +..+|.++||+|..+|.+|.+++-.
T Consensus 220 ~tvvV~atsd~p~~~----r~~----ap~~a~aiAEyfrd~G~~VLlv~Dd 262 (497)
T TIGR03324 220 YTIVVVTEGNDPPGL----QYI----APYAATSIGEHFMEQGRDVLIVYDD 262 (497)
T ss_pred eeEEEEeCCCCCHHH----HHH----HHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 777777776665654 444 4578999999999999999999854
No 476
>PRK05922 type III secretion system ATPase; Validated
Probab=49.92 E-value=19 Score=36.18 Aligned_cols=43 Identities=19% Similarity=0.233 Sum_probs=32.2
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.|+|-+=...-|+. .+| ...+|.++||+|+..|.+|.++.-.
T Consensus 213 rTVlv~atsd~~~~~--r~~------a~~~a~tiAEyfrd~G~~VLl~~Ds 255 (434)
T PRK05922 213 RTIIIASPAHETAPT--KVI------AGRAAMTIAEYFRDQGHRVLFIMDS 255 (434)
T ss_pred ceEEEEECCCCCHHH--HHH------HHHHHHHHHHHHHHcCCCEEEeccc
Confidence 566666665554554 232 5788999999999999999999854
No 477
>PRK09281 F0F1 ATP synthase subunit alpha; Validated
Probab=49.80 E-value=30 Score=35.35 Aligned_cols=43 Identities=16% Similarity=0.264 Sum_probs=34.4
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.|+|.+-...-|+. |++ +..+|.++||+|+..|.+|.++.-.
T Consensus 220 ~tvvv~atsd~p~~~----r~~----a~~~a~tiAEyfrd~G~~VLli~Dd 262 (502)
T PRK09281 220 YTIVVAATASDPAPL----QYL----APYAGCAMGEYFMDNGKDALIVYDD 262 (502)
T ss_pred ceEEEEeCCCCCHHH----HHH----HHHHHHHHHHHHHHcCCCEEEEecC
Confidence 778887776666655 443 6788999999999999999999854
No 478
>TIGR03498 FliI_clade3 flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively.
Probab=49.73 E-value=28 Score=34.75 Aligned_cols=43 Identities=23% Similarity=0.288 Sum_probs=33.1
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.|+|-+-...-|+. |+ -...+|.++||+|..+|.+|.++.-.
T Consensus 196 ~tvvv~atsd~~~~~----r~----~a~~~a~~iAEyfrd~G~~Vll~~Ds 238 (418)
T TIGR03498 196 RSVVVVATSDESPLM----RR----QAAYTATAIAEYFRDQGKDVLLLMDS 238 (418)
T ss_pred eeEEEEECCCCCHHH----HH----HHHHHHHHHHHHHHHcCCCEEEeccc
Confidence 677777776655655 22 25678999999999999999999853
No 479
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=49.61 E-value=42 Score=28.83 Aligned_cols=26 Identities=31% Similarity=0.298 Sum_probs=22.9
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeCC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRRG 95 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~~ 95 (292)
.|..|.++|+.+...|..|+++.+..
T Consensus 44 ~G~IG~~vA~~l~~fG~~V~~~d~~~ 69 (178)
T PF02826_consen 44 YGRIGRAVARRLKAFGMRVIGYDRSP 69 (178)
T ss_dssp TSHHHHHHHHHHHHTT-EEEEEESSC
T ss_pred EcCCcCeEeeeeecCCceeEEecccC
Confidence 78999999999999999999999753
No 480
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=49.53 E-value=41 Score=30.71 Aligned_cols=53 Identities=23% Similarity=0.205 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhcCCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEee
Q 022803 23 AAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 23 ~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
|.|.....-|+.+..--.|-=..|+=|||...+||| +|++..+.||.|+.+..
T Consensus 87 Erieg~~~~~l~~~~i~~~DVliviSnSGrNpvpie------------------~A~~~rekGa~vI~vTS 139 (243)
T COG4821 87 ERIEGYAKLFLHRLQIRPNDVLIVISNSGRNPVPIE------------------VAEYAREKGAKVIAVTS 139 (243)
T ss_pred HhhhhHHHHHHHHhcCCCCCEEEEEeCCCCCCcchH------------------HHHHHHhcCCeEEEEeh
Confidence 556555566666532112111234457898888888 89999999999999986
No 481
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]
Probab=49.43 E-value=31 Score=32.40 Aligned_cols=27 Identities=22% Similarity=0.233 Sum_probs=24.0
Q ss_pred cHHHHHHHHHHHHCCCeEEEEeeCCCC
Q 022803 71 GHRGAASTEHLIKMGYAVIFLYRRGTC 97 (292)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~g~~~~ 97 (292)
|-.|..+|++|.++|++|+++......
T Consensus 145 G~~gle~A~~~~~~G~~v~l~e~~~~~ 171 (415)
T COG0446 145 GPIGLEAAEAAAKRGKKVTLIEAADRL 171 (415)
T ss_pred cHHHHHHHHHHHHcCCeEEEEEccccc
Confidence 688999999999999999999976543
No 482
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=49.39 E-value=19 Score=33.67 Aligned_cols=25 Identities=20% Similarity=0.312 Sum_probs=22.4
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||..+|..+++.|++|+.+.+.
T Consensus 9 lG~mG~~mA~~l~~~G~~V~v~d~~ 33 (296)
T PRK15461 9 LGQMGSPMASNLLKQGHQLQVFDVN 33 (296)
T ss_pred eCHHHHHHHHHHHHCCCeEEEEcCC
Confidence 8999999999999999999877653
No 483
>PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional
Probab=49.30 E-value=23 Score=36.17 Aligned_cols=24 Identities=25% Similarity=0.349 Sum_probs=22.2
Q ss_pred cHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 71 GHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|-.|.++|.+++++|.+|++|...
T Consensus 15 Gi~G~~iA~~La~rG~~V~LlEk~ 38 (546)
T PRK11101 15 GATGAGIARDCALRGLRCILVERH 38 (546)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECC
Confidence 688999999999999999999864
No 484
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=49.16 E-value=31 Score=31.98 Aligned_cols=34 Identities=15% Similarity=0.192 Sum_probs=29.3
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCC-eEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGY-AVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga-~V~~i~g~ 94 (292)
+.+|||++| +|..|.+.++.+..+|+ .|+.+.+.
T Consensus 155 ~~~VlI~ga------------------~g~vG~~aiqlAk~~G~~~Vi~~~~s 189 (345)
T cd08293 155 NQTMVVSGA------------------AGACGSLAGQIGRLLGCSRVVGICGS 189 (345)
T ss_pred CCEEEEECC------------------CcHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 389999998 89999999999999999 78877653
No 485
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=49.16 E-value=32 Score=31.47 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=28.4
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.+|||. | +|..|.++++.+..+|+.|+.+.+.
T Consensus 156 g~~vlV~-g------------------~g~vg~~~~q~a~~~G~~vi~~~~~ 188 (319)
T cd08242 156 GDKVAVL-G------------------DGKLGLLIAQVLALTGPDVVLVGRH 188 (319)
T ss_pred CCEEEEE-C------------------CCHHHHHHHHHHHHcCCeEEEEcCC
Confidence 4888888 7 7889999999999999998887653
No 486
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional
Probab=49.14 E-value=35 Score=32.59 Aligned_cols=26 Identities=23% Similarity=0.305 Sum_probs=22.8
Q ss_pred cHHHHHHHHHHHHCCCeEEEEeeCCC
Q 022803 71 GHRGAASTEHLIKMGYAVIFLYRRGT 96 (292)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~g~~~ 96 (292)
|-.|..+|..+..+|.+|++++....
T Consensus 150 G~~g~e~A~~L~~~g~~Vtlv~~~~~ 175 (377)
T PRK04965 150 GLIGTELAMDLCRAGKAVTLVDNAAS 175 (377)
T ss_pred CHHHHHHHHHHHhcCCeEEEEecCCc
Confidence 56799999999999999999997544
No 487
>PRK13343 F0F1 ATP synthase subunit alpha; Provisional
Probab=49.07 E-value=33 Score=35.06 Aligned_cols=43 Identities=19% Similarity=0.314 Sum_probs=33.9
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.|+|.+....-|.. |++ ...+|.++||+|..+|.+|.+++-.
T Consensus 220 ~tvvV~atsd~~~~~----r~~----ap~~a~aiAEyfrd~G~~VLlv~Dd 262 (502)
T PRK13343 220 YTTVVVAEASDPPGL----QYL----APFAGCAIAEYFRDQGQDALIVYDD 262 (502)
T ss_pred eeEEEEecccccHHH----HHH----HHHHHHHHHHHHHhCCCCEEEEecc
Confidence 778888876666654 443 4578999999999999999999854
No 488
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc). Xsc plays a key role in the degradation of taurine, catalyzing the desulfonation of 2-sulfoacetaldehyde into sulfite and acetyl phosphate. This enzyme requires TPP and divalent metal ions for activity.
Probab=48.67 E-value=67 Score=28.06 Aligned_cols=69 Identities=16% Similarity=0.143 Sum_probs=44.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCceEEEecCCc-cc------ccCCCceeeeecCCccHHHHHHHHH----HHHCCCe
Q 022803 19 LNDRAAISQKLKEFIALNSSESGTRRVACVTSGGT-TV------PLEQRCVRYIDNFSSGHRGAASTEH----LIKMGYA 87 (292)
Q Consensus 19 ~~~~~~i~~~~~~~l~~~~~l~~~~k~VLITaG~T-~E------~ID~~~VR~ItN~SSG~~G~~iAe~----~~~~Ga~ 87 (292)
+..|..+...+.+.+ +. ..++++-+|+ .. +++. |-||++..+-|.||+++.-+ ++..+..
T Consensus 3 ~l~~~~~~~~l~~~l------~~--~~ivv~d~G~~~~~~~~~~~~~~-~~~~~~~~~~g~mG~~lpaaiGa~la~p~r~ 73 (196)
T cd02013 3 PMHPRQVLRELEKAM------PE--DAIVSTDIGNICSVANSYLRFEK-PRSFIAPLSFGNCGYALPAIIGAKAAAPDRP 73 (196)
T ss_pred CCCHHHHHHHHHHHC------CC--CEEEEECCcHHHHHHHHhcCcCC-CCeEEcCCCCcccccHHHHHHHHHHhCCCCc
Confidence 346777777666665 21 4566664444 22 4443 78999877778888655544 4445678
Q ss_pred EEEEeeCCC
Q 022803 88 VIFLYRRGT 96 (292)
Q Consensus 88 V~~i~g~~~ 96 (292)
|+.+.|.++
T Consensus 74 vv~i~GDG~ 82 (196)
T cd02013 74 VVAIAGDGA 82 (196)
T ss_pred EEEEEcchH
Confidence 999999776
No 489
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=48.59 E-value=18 Score=36.48 Aligned_cols=25 Identities=16% Similarity=0.232 Sum_probs=22.9
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
.|.||.++|..|+.+|++|++....
T Consensus 12 ~G~MG~~iA~~la~~G~~V~v~D~~ 36 (495)
T PRK07531 12 GGVIGGGWAARFLLAGIDVAVFDPH 36 (495)
T ss_pred cCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 8999999999999999999988753
No 490
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=48.52 E-value=37 Score=30.19 Aligned_cols=34 Identities=15% Similarity=0.126 Sum_probs=29.7
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.+|+|.++ +|..|.++++.+...|+.|+.+...
T Consensus 145 ~~~vlv~g~------------------~g~~g~~~~~~a~~~g~~v~~~~~~ 178 (309)
T cd05289 145 GQTVLIHGA------------------AGGVGSFAVQLAKARGARVIATASA 178 (309)
T ss_pred CCEEEEecC------------------CchHHHHHHHHHHHcCCEEEEEecc
Confidence 489999987 7899999999999999999888753
No 491
>cd01134 V_A-ATPase_A V/A-type ATP synthase catalytic subunit A. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi apparatus and in other coated vesicles in eukaryotes. Archaea have a protein which is similar in sequence to V-ATPases, but functions like an F-ATPase (called A-ATPase). A similar protein is also found in a few bacteria.
Probab=48.44 E-value=17 Score=35.68 Aligned_cols=25 Identities=28% Similarity=0.336 Sum_probs=22.5
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+..+|.++||+|+.+|++|.++.-.
T Consensus 238 s~yta~tiAEYfrd~G~dVll~~Ds 262 (369)
T cd01134 238 SIYTGITIAEYFRDMGYNVALMADS 262 (369)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 5678999999999999999999864
No 492
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=48.43 E-value=36 Score=31.47 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=29.5
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEee
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
+.+|+|+++ +|.+|.++++.+..+|+.|+.+.+
T Consensus 163 g~~vlI~g~------------------~g~ig~~~~~~a~~~G~~v~~~~~ 195 (350)
T cd08248 163 GKRVLILGG------------------SGGVGTFAIQLLKAWGAHVTTTCS 195 (350)
T ss_pred CCEEEEECC------------------CChHHHHHHHHHHHCCCeEEEEeC
Confidence 489999988 889999999999999999887765
No 493
>CHL00059 atpA ATP synthase CF1 alpha subunit
Probab=48.41 E-value=24 Score=35.97 Aligned_cols=43 Identities=19% Similarity=0.280 Sum_probs=33.8
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.|+|.+....-+.. ||+ +..+|.++||+|...|.+|.+++-.
T Consensus 199 ~tvvV~atad~~~~~----r~~----ap~~a~aiAEyfr~~G~~VLlv~Dd 241 (485)
T CHL00059 199 YTIVVAETADSPATL----QYL----APYTGAALAEYFMYRGRHTLIIYDD 241 (485)
T ss_pred ceEEEEeCCCCCHHH----HHH----HHHHHhhHHHHHHHcCCCEEEEEcC
Confidence 778888876665554 443 5677999999999999999999854
No 494
>TIGR03496 FliI_clade1 flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively.
Probab=47.81 E-value=39 Score=33.59 Aligned_cols=43 Identities=21% Similarity=0.268 Sum_probs=33.0
Q ss_pred ceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 44 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 44 k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.|+|.+=...-|.. -+ -+..+|.++||+|...|.+|.++.-.
T Consensus 193 ~tvvv~~tsd~~~~~--r~------~a~~~a~tiAEyfr~~G~~Vll~~Ds 235 (411)
T TIGR03496 193 RSVVVAATADESPLM--RL------RAAFYATAIAEYFRDQGKDVLLLMDS 235 (411)
T ss_pred eEEEEEECCCCCHHH--HH------HHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 667776665555655 22 26789999999999999999999854
No 495
>PRK13369 glycerol-3-phosphate dehydrogenase; Provisional
Probab=47.66 E-value=25 Score=35.38 Aligned_cols=24 Identities=21% Similarity=0.302 Sum_probs=22.4
Q ss_pred cHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 71 GHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 71 G~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
|-.|.++|..++.+|..|++|-..
T Consensus 15 Gi~G~~~A~~la~rG~~V~LlEk~ 38 (502)
T PRK13369 15 GINGAGIARDAAGRGLKVLLCEKD 38 (502)
T ss_pred CHHHHHHHHHHHhCCCcEEEEECC
Confidence 688999999999999999999965
No 496
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=47.64 E-value=51 Score=24.51 Aligned_cols=38 Identities=11% Similarity=-0.033 Sum_probs=27.8
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.+||||+|.... | ....=.+|-+...+.+- +++|||-
T Consensus 3 g~rVli~GgR~~~--D-----------~~~i~~~Ld~~~~~~~~-~~lvhGg 40 (71)
T PF10686_consen 3 GMRVLITGGRDWT--D-----------HELIWAALDKVHARHPD-MVLVHGG 40 (71)
T ss_pred CCEEEEEECCccc--c-----------HHHHHHHHHHHHHhCCC-EEEEECC
Confidence 4899999997765 5 44566777776666655 6699984
No 497
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=47.56 E-value=37 Score=31.03 Aligned_cols=34 Identities=26% Similarity=0.392 Sum_probs=29.9
Q ss_pred CceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCeEEEEeeC
Q 022803 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 94 (292)
Q Consensus 43 ~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 94 (292)
+.+|||.++ +|..|.++++.+..+|+.|+.+.+.
T Consensus 147 ~~~vlI~g~------------------~g~vg~~~~~~a~~~g~~v~~~~~~ 180 (326)
T cd08289 147 QGPVLVTGA------------------TGGVGSLAVSILAKLGYEVVASTGK 180 (326)
T ss_pred CCEEEEEcC------------------CchHHHHHHHHHHHCCCeEEEEecC
Confidence 479999988 8899999999999999999887764
No 498
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=47.43 E-value=17 Score=28.55 Aligned_cols=27 Identities=30% Similarity=0.356 Sum_probs=19.7
Q ss_pred ceeeeecCCccHHHHHHHHHHHHCCCeE
Q 022803 61 CVRYIDNFSSGHRGAASTEHLIKMGYAV 88 (292)
Q Consensus 61 ~VR~ItN~SSG~~G~~iAe~~~~~Ga~V 88 (292)
+|+|+||.|+ +.-..+++.+..+|..|
T Consensus 32 ~~~~lTNns~-~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 32 PVVFLTNNSS-RSREEYAKKLKKLGIPV 58 (101)
T ss_dssp EEEEEES-SS-S-HHHHHHHHHHTTTT-
T ss_pred CEEEEeCCCC-CCHHHHHHHHHhcCcCC
Confidence 7889999865 55677888888999875
No 499
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=47.40 E-value=37 Score=30.33 Aligned_cols=57 Identities=9% Similarity=0.024 Sum_probs=39.8
Q ss_pred CCCCCHHHHHHHHHHHHhc--CCCCCCCCceEEEecCCcccccCCCceeeeecCCccHHHHHHHHHHHHCCCe-EEEEee
Q 022803 17 PPLNDRAAISQKLKEFIAL--NSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA-VIFLYR 93 (292)
Q Consensus 17 ~~~~~~~~i~~~~~~~l~~--~~~l~~~~k~VLITaG~T~E~ID~~~VR~ItN~SSG~~G~~iAe~~~~~Ga~-V~~i~g 93 (292)
++.++.+.|.+.+...+.. +..+++ .+|+|-+ .|.+|..+|+.+++.|.. ++++..
T Consensus 2 ~~~~~~~~~~~~~~~~~g~~~q~~L~~--~~V~ViG-------------------~GglGs~ia~~La~~Gvg~i~lvD~ 60 (212)
T PRK08644 2 GEIPSMEEFEAMLASRHTPKLLEKLKK--AKVGIAG-------------------AGGLGSNIAVALARSGVGNLKLVDF 60 (212)
T ss_pred CccCcHHHHHHHHHhhcCHHHHHHHhC--CCEEEEC-------------------cCHHHHHHHHHHHHcCCCeEEEEeC
Confidence 5667777777766655431 334543 6666653 468999999999999997 777776
Q ss_pred C
Q 022803 94 R 94 (292)
Q Consensus 94 ~ 94 (292)
.
T Consensus 61 D 61 (212)
T PRK08644 61 D 61 (212)
T ss_pred C
Confidence 4
No 500
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=47.36 E-value=59 Score=32.78 Aligned_cols=24 Identities=21% Similarity=0.378 Sum_probs=20.8
Q ss_pred ccHHHHHHHHHHHHCCCeEEEEee
Q 022803 70 SGHRGAASTEHLIKMGYAVIFLYR 93 (292)
Q Consensus 70 SG~~G~~iAe~~~~~Ga~V~~i~g 93 (292)
+|.+|.++|..+...|++|+++.+
T Consensus 340 aGgiG~aia~~L~~~G~~V~i~~R 363 (477)
T PRK09310 340 AGGAAKAIATTLARAGAELLIFNR 363 (477)
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 478999999999999998887654
Done!