Query 022804
Match_columns 292
No_of_seqs 188 out of 1205
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 11:24:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022804.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022804hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 2.7E-77 9.4E-82 551.6 27.7 276 3-279 70-351 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 1.1E-76 3.6E-81 539.9 21.5 276 3-285 24-306 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 2.8E-75 9.4E-80 529.8 28.1 270 3-273 26-309 (312)
4 1dcs_A Deacetoxycephalosporin 100.0 3E-72 1E-76 509.3 18.5 259 3-274 22-306 (311)
5 1odm_A Isopenicillin N synthas 100.0 2.1E-70 7.1E-75 501.5 26.3 260 3-274 32-325 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 1.5E-66 5.1E-71 465.3 24.2 244 3-273 18-277 (280)
7 3dkq_A PKHD-type hydroxylase S 96.4 0.014 4.7E-07 50.2 8.7 81 137-235 98-194 (243)
8 2rg4_A Uncharacterized protein 95.2 0.33 1.1E-05 40.7 12.5 43 184-238 166-209 (216)
9 2hbt_A EGL nine homolog 1; pro 93.1 0.28 9.5E-06 42.0 7.8 81 139-235 118-212 (247)
10 2jig_A Prolyl-4 hydroxylase; h 91.2 0.49 1.7E-05 39.6 6.9 89 139-237 99-218 (224)
11 3s57_A Alpha-ketoglutarate-dep 90.6 0.96 3.3E-05 37.4 8.0 81 138-233 100-200 (204)
12 3i3q_A Alpha-ketoglutarate-dep 90.6 1.4 4.9E-05 36.7 9.1 80 138-234 105-201 (211)
13 3itq_A Prolyl 4-hydroxylase, a 90.3 0.89 3E-05 38.0 7.7 102 114-235 95-211 (216)
14 2iuw_A Alkylated repair protei 90.0 1.4 4.9E-05 37.3 8.8 83 138-235 126-229 (238)
15 3tht_A Alkylated DNA repair pr 76.7 7.3 0.00025 34.8 7.7 106 137-251 197-327 (345)
16 2da7_A Zinc finger homeobox pr 46.3 7.3 0.00025 26.4 1.2 41 95-135 15-55 (71)
17 3kt7_A PKHD-type hydroxylase T 40.5 94 0.0032 29.9 8.2 84 140-238 126-231 (633)
18 2x4k_A 4-oxalocrotonate tautom 37.6 27 0.00091 21.8 3.0 24 106-129 18-41 (63)
19 3abf_A 4-oxalocrotonate tautom 34.6 39 0.0014 21.2 3.5 24 106-129 16-39 (64)
20 1e5r_A Proline oxidase; oxidor 32.8 55 0.0019 28.4 4.9 65 155-234 102-175 (290)
21 2opa_A Probable tautomerase YW 29.0 45 0.0015 20.6 3.0 23 106-128 15-37 (61)
22 1otf_A 4-oxalocrotonate tautom 28.9 45 0.0015 20.7 2.9 23 106-128 15-37 (62)
23 2vf9_A Coat protein; virion, R 27.1 16 0.00056 25.9 0.5 29 189-221 38-66 (131)
24 3ry0_A Putative tautomerase; o 24.3 61 0.0021 20.6 3.0 24 105-128 14-37 (65)
25 2ww6_A Fibritin, T4 fibritin; 23.8 72 0.0025 17.0 2.5 14 177-190 11-24 (27)
26 3m21_A Probable tautomerase HP 22.3 70 0.0024 20.4 3.0 24 105-128 17-40 (67)
27 3rcq_A Aspartyl/asparaginyl be 21.6 1.1E+02 0.0039 24.7 4.7 42 197-238 140-186 (197)
28 1gyx_A YDCE, B1461, hypothetic 21.0 74 0.0025 21.0 2.9 25 105-129 15-39 (76)
29 3m20_A 4-oxalocrotonate tautom 20.9 65 0.0022 20.3 2.5 23 106-128 14-36 (62)
30 3mb2_A 4-oxalocrotonate tautom 20.7 75 0.0026 20.7 2.9 24 105-128 15-38 (72)
31 2qt7_A Receptor-type tyrosine- 20.3 37 0.0013 24.0 1.2 33 110-142 18-51 (91)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=2.7e-77 Score=551.63 Aligned_cols=276 Identities=30% Similarity=0.547 Sum_probs=255.0
Q ss_pred HhhhhhhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhccccC--CCccccccCccccccccCCcccccccccCC
Q 022804 3 HNFFFKLIKCVQVINHGVSSSLLEKLKFEIENFFKLPYEEKKKLWQVA--DNHEGFGQLFVVSEEQKLDWSDMFYIATLP 80 (292)
Q Consensus 3 ~~~A~~~~Gff~l~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~--~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~~ 80 (292)
.++||++||||||+||||+.++++++++.+++||+||.|+|+++.... ..++||+........+..||+|.|++...|
T Consensus 70 l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p 149 (356)
T 1gp6_A 70 LKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYP 149 (356)
T ss_dssp HHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEES
T ss_pred HHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCC
Confidence 368999999999999999999999999999999999999999998754 368999876555556678999999988766
Q ss_pred CCcccCCcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhCCCChhhhHhhhc---ccccceeeeecCCCCCCCCcccc
Q 022804 81 LHLRKTDLFHKLPPSLRETLESYSAEMKKLAMTILGHMAKALRMDGEEMRDLFS---DGVQSMRMNYYPPCPQPDKVIGF 157 (292)
Q Consensus 81 ~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~ 157 (292)
.....+|.||+.+|+||+.+++|+++|.+|+.+||++||++|||++++|.+.+. .+.+.||++|||||++++..+|+
T Consensus 150 ~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~ 229 (356)
T 1gp6_A 150 EEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGV 229 (356)
T ss_dssp GGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSE
T ss_pred ccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCc
Confidence 444578999999999999999999999999999999999999999999999987 47788999999999998888999
Q ss_pred cCCCCCCceEEEEeCCCCCceEEEeCCeeEEccCCCCeEEEEechhhHHHhCCccccccceeecCCCCCeEEEEeeecCC
Q 022804 158 SPHSDADALTILLQLDDTQGLQIRNQGRWVPVKPLPNAFVINIGDIMEIVSNGIYRSIEHRALVNSSKERLSIATFYSSR 237 (292)
Q Consensus 158 ~~HtD~~~lTlL~q~~~~~GLqV~~~g~W~~V~p~~g~lvVnvGd~l~~~Tng~~~s~~HRVv~~~~~~R~Si~~F~~p~ 237 (292)
++|||+|+||||+| ++++||||+++|+|++|+|.||++||||||+||+||||+|||++|||+.+++++|||++||++|+
T Consensus 230 ~~HtD~g~lTlL~q-d~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~ 308 (356)
T 1gp6_A 230 EAHTDVSALTFILH-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPP 308 (356)
T ss_dssp EEECCCSSEEEEEE-CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECC
T ss_pred CCccCCCeEEEEEE-cCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCC
Confidence 99999999999999 57999999999999999999999999999999999999999999999998888999999999999
Q ss_pred CCC-eeecCCCCCCCCCCCCCCCcCHHHHHHHHHHhhcCCccc
Q 022804 238 IDS-ELGPAPSLIGPSNPAIFRRMPLEEYFKEFFARRLNGKAY 279 (292)
Q Consensus 238 ~d~-~i~p~~~~~~~~~p~~y~~~~~~d~~~~~~~~~~~~~~~ 279 (292)
.|+ +|+|+++|+++++|++|+++|++||+..+++..++++..
T Consensus 309 ~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~ 351 (356)
T 1gp6_A 309 KDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELV 351 (356)
T ss_dssp TTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred CCCcEEeCChhhcCCCCCccCCCccHHHHHHHHHHhccCcchh
Confidence 999 999999999999999999999999999999888766543
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=1.1e-76 Score=539.92 Aligned_cols=276 Identities=25% Similarity=0.552 Sum_probs=246.7
Q ss_pred HhhhhhhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhccccCCCccccccCccccccccCCcccccccccCCCC
Q 022804 3 HNFFFKLIKCVQVINHGVSSSLLEKLKFEIENFFKLPYEEKKKLWQVADNHEGFGQLFVVSEEQKLDWSDMFYIATLPLH 82 (292)
Q Consensus 3 ~~~A~~~~Gff~l~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~~~~ 82 (292)
.++||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||+... .+.+..||+|.|.+...|.
T Consensus 24 l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---~~Gy~~~~--~e~~~~d~ke~~~~~~~p~- 97 (319)
T 1w9y_A 24 IKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---SKALEGVQ--AEVTDMDWESTFFLKHLPI- 97 (319)
T ss_dssp HHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHTTCC--CCGGGCCCCEEEEEEEESC-
T ss_pred HHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC---CCCCCccc--ccCCCCChhhheeeecCCc-
Confidence 46899999999999999999999999999999999999999998753 34786542 2346789999999876553
Q ss_pred cccCCcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhCCCChhhhHhhhcc---cccceeeeecCCCCCCCCcccccC
Q 022804 83 LRKTDLFHKLPPSLRETLESYSAEMKKLAMTILGHMAKALRMDGEEMRDLFSD---GVQSMRMNYYPPCPQPDKVIGFSP 159 (292)
Q Consensus 83 ~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~---~~~~lr~~~Yp~~~~~~~~~g~~~ 159 (292)
..+|.||+.+|+||+.+++|+++|.+|+.+||++||++|||++++|.+.+.. +.+.||++|||||++++..+|+++
T Consensus 98 -~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~ 176 (319)
T 1w9y_A 98 -SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRA 176 (319)
T ss_dssp -CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEECCCCSCGGGGSSCCC
T ss_pred -ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEEecCCCccccccccccc
Confidence 3578999999999999999999999999999999999999999999998873 567899999999999888899999
Q ss_pred CCCCCceEEEEeCCCCCceEEEeCCeeEEccCCCCeEEEEechhhHHHhCCccccccceeecCCCCCeEEEEeeecCCCC
Q 022804 160 HSDADALTILLQLDDTQGLQIRNQGRWVPVKPLPNAFVINIGDIMEIVSNGIYRSIEHRALVNSSKERLSIATFYSSRID 239 (292)
Q Consensus 160 HtD~~~lTlL~q~~~~~GLqV~~~g~W~~V~p~~g~lvVnvGd~l~~~Tng~~~s~~HRVv~~~~~~R~Si~~F~~p~~d 239 (292)
|||+|+||||+||++++||||+++|+|++|+|.||++||||||+||+||||+|||+.|||+.+++++|||++||++|+.|
T Consensus 177 HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~d 256 (319)
T 1w9y_A 177 HTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSD 256 (319)
T ss_dssp BCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEEEECCTT
T ss_pred ccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCCCCceEEEEEecCCCC
Confidence 99999999999954799999999999999999999999999999999999999999999999988899999999999999
Q ss_pred CeeecCCCCCCCC---CCCCCCCcCHHHHHHHHHHhhcCCccc-cccccc
Q 022804 240 SELGPAPSLIGPS---NPAIFRRMPLEEYFKEFFARRLNGKAY-LDFMRV 285 (292)
Q Consensus 240 ~~i~p~~~~~~~~---~p~~y~~~~~~d~~~~~~~~~~~~~~~-~~~~~~ 285 (292)
++|+|+++|++++ +|++|+++|++||+..+++..+.++.. ++.+++
T Consensus 257 ~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~ 306 (319)
T 1w9y_A 257 AVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKA 306 (319)
T ss_dssp CEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHH
T ss_pred CeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHH
Confidence 9999999999987 599999999999999999888877764 566665
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=2.8e-75 Score=529.85 Aligned_cols=270 Identities=20% Similarity=0.371 Sum_probs=241.0
Q ss_pred HhhhhhhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhccccCCCccccccCcccc--ccccCCcccccccccCC
Q 022804 3 HNFFFKLIKCVQVINHGVSSSLLEKLKFEIENFFKLPYEEKKKLWQVADNHEGFGQLFVVS--EEQKLDWSDMFYIATLP 80 (292)
Q Consensus 3 ~~~A~~~~Gff~l~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~~~~~--~~~~~d~~e~~~~~~~~ 80 (292)
.++||++||||||+||||+.++++++++.+++||+||.|+|+++......++||...+.+. .....||+|.|.++...
T Consensus 26 l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~g~e~~~~~~~~D~kE~~~~~~~~ 105 (312)
T 3oox_A 26 LGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFGVETAKGADHYDLKEFWHMGRDL 105 (312)
T ss_dssp HHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECCCCCCSTTSCSCCCCEEEEECCCC
T ss_pred HHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccccccceecCCCCCCCceeeeEeecCC
Confidence 3689999999999999999999999999999999999999999987545678997644332 23468999999886421
Q ss_pred C------CcccCCcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhCCCChhhhHhhhcccccceeeeecCCCCCCCCc
Q 022804 81 L------HLRKTDLFHKLPPSLRETLESYSAEMKKLAMTILGHMAKALRMDGEEMRDLFSDGVQSMRMNYYPPCPQPDKV 154 (292)
Q Consensus 81 ~------~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~ 154 (292)
. ....+|.||+.+|+||+.+++|+++|.+|+.+||++||++|||++++|.+.+..+.+.||++|||||++++..
T Consensus 106 ~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~ 185 (312)
T 3oox_A 106 PPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATG 185 (312)
T ss_dssp CTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHHHHTTCCCEEEEEEECCCSSCCC-
T ss_pred CcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcCCcceeeeEecCCCCCCcCC
Confidence 1 1235789999999999999999999999999999999999999999999999888889999999999976555
Q ss_pred ccccCCCCCCceEEEEeCCCCCceEEEe-CCeeEEccCCCCeEEEEechhhHHHhCCccccccceeecCC----CCCeEE
Q 022804 155 IGFSPHSDADALTILLQLDDTQGLQIRN-QGRWVPVKPLPNAFVINIGDIMEIVSNGIYRSIEHRALVNS----SKERLS 229 (292)
Q Consensus 155 ~g~~~HtD~~~lTlL~q~~~~~GLqV~~-~g~W~~V~p~~g~lvVnvGd~l~~~Tng~~~s~~HRVv~~~----~~~R~S 229 (292)
+|+++|||+|+||||+| ++++||||+. +|+|++|+|+||++||||||+||+||||+||||+|||+.++ ..+|||
T Consensus 186 ~g~~~HtD~g~lTlL~q-d~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~S 264 (312)
T 3oox_A 186 VRAGAHGDINTITLLLG-AEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYS 264 (312)
T ss_dssp -CEEEECCCSSEEEEEC-CTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEE
T ss_pred cCccceecCceEEEEeE-cCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEE
Confidence 99999999999999999 5799999974 89999999999999999999999999999999999998763 467999
Q ss_pred EEeeecCCCCCeeecCCCCCCCCCCCCCC-CcCHHHHHHHHHHhh
Q 022804 230 IATFYSSRIDSELGPAPSLIGPSNPAIFR-RMPLEEYFKEFFARR 273 (292)
Q Consensus 230 i~~F~~p~~d~~i~p~~~~~~~~~p~~y~-~~~~~d~~~~~~~~~ 273 (292)
++||++|+.|++|+|+++|+++++|++|+ ++|++||+..+++..
T Consensus 265 ia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 265 TPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp CCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred EEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence 99999999999999999999999999999 999999999998753
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=3e-72 Score=509.34 Aligned_cols=259 Identities=17% Similarity=0.243 Sum_probs=223.5
Q ss_pred HhhhhhhccEEEEEcCCCCHHHHHHHHHHHHHhhCCC-HHHHhhccccC-CCccccccCccc------cccccCCccccc
Q 022804 3 HNFFFKLIKCVQVINHGVSSSLLEKLKFEIENFFKLP-YEEKKKLWQVA-DNHEGFGQLFVV------SEEQKLDWSDMF 74 (292)
Q Consensus 3 ~~~A~~~~Gff~l~nhgi~~~l~~~~~~~~~~fF~lP-~e~K~~~~~~~-~~~~Gy~~~~~~------~~~~~~d~~e~~ 74 (292)
.++||++||||||+||||+.++++++++.+++||+|| .|+|+++.... ..++||+..+.+ ...+..||+|.|
T Consensus 22 l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~~~e~~~~~~~~~~~~d~~E~~ 101 (311)
T 1dcs_A 22 FRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLESESTAQITNTGSYSDYSMCY 101 (311)
T ss_dssp HHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC-----------------CEEE
T ss_pred HHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeeccccccccccCCCCCCCcceee
Confidence 3689999999999999999999999999999999999 99999998864 568999875543 224578999999
Q ss_pred ccccCCCCcccCCcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhCCC----ChhhhHhhhcccccceeeeecCCCCC
Q 022804 75 YIATLPLHLRKTDLFHKLPPSLRETLESYSAEMKKLAMTILGHMAKALRM----DGEEMRDLFSDGVQSMRMNYYPPCPQ 150 (292)
Q Consensus 75 ~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl----~~~~~~~~~~~~~~~lr~~~Yp~~~~ 150 (292)
++... +|.|| +|+||+.+++|+++|.+|+.+||++||++||| ++++|.+. .+.||++|||||++
T Consensus 102 ~~~~~------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~----~~~lrl~~YPp~~~ 169 (311)
T 1dcs_A 102 SMGTA------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDC----EPLLRFRYFPQVPE 169 (311)
T ss_dssp EECSS------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHSC----CCEEEEEEECC---
T ss_pred eccCC------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhhc----chhhheecCCCCCc
Confidence 98753 68899 89999999999999999999999999999999 88888766 67899999999987
Q ss_pred CC--C--cccccCCCCCCceEEEEeCCCCCc---eEEEeCCeeEEccCCCCeEEEEechhhHHHhCCccccccceeecCC
Q 022804 151 PD--K--VIGFSPHSDADALTILLQLDDTQG---LQIRNQGRWVPVKPLPNAFVINIGDIMEIVSNGIYRSIEHRALVNS 223 (292)
Q Consensus 151 ~~--~--~~g~~~HtD~~~lTlL~q~~~~~G---LqV~~~g~W~~V~p~~g~lvVnvGd~l~~~Tng~~~s~~HRVv~~~ 223 (292)
++ . .+|+++|||+|+||||+||++++| |||+++|+|++|+|+||++||||||+||+||||+|||++|||+.++
T Consensus 170 ~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~ 249 (311)
T 1dcs_A 170 HRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPR 249 (311)
T ss_dssp --------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC-
T ss_pred ccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCCC
Confidence 63 3 678999999999999999437999 9999999999999999999999999999999999999999999987
Q ss_pred -----CCCeEEEEeeecCCCCCeeecCCCCCCCCCCCCC--CCcCHHHHHHHHHHhhc
Q 022804 224 -----SKERLSIATFYSSRIDSELGPAPSLIGPSNPAIF--RRMPLEEYFKEFFARRL 274 (292)
Q Consensus 224 -----~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~p~~y--~~~~~~d~~~~~~~~~~ 274 (292)
.++||||+||++|+.|++|. +++++++++|++| +++|++||+..++++.+
T Consensus 250 ~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~ 306 (311)
T 1dcs_A 250 RDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIR 306 (311)
T ss_dssp ---CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEE
T ss_pred cccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHh
Confidence 67899999999999999999 9999998899999 99999999987766554
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=2.1e-70 Score=501.48 Aligned_cols=260 Identities=19% Similarity=0.256 Sum_probs=234.0
Q ss_pred HhhhhhhccEEEEEcCCCCHHHHHHHHHHHHHh-hCCCHHHHhhccccCCCccccccCcccc--cc------ccCCcccc
Q 022804 3 HNFFFKLIKCVQVINHGVSSSLLEKLKFEIENF-FKLPYEEKKKLWQVADNHEGFGQLFVVS--EE------QKLDWSDM 73 (292)
Q Consensus 3 ~~~A~~~~Gff~l~nhgi~~~l~~~~~~~~~~f-F~lP~e~K~~~~~~~~~~~Gy~~~~~~~--~~------~~~d~~e~ 73 (292)
.++||++||||||+|||| +++++++.+++| |+||.|+|+++.. +||...+.+. .+ ...||+|.
T Consensus 32 l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-----~Gy~~~~~e~~~~~~~~~~~~~~d~kE~ 103 (331)
T 1odm_A 32 IDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-----RAYNKEHQDQVRAGYYLSIPGKKAVESF 103 (331)
T ss_dssp HHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----TTTCTTCTTCSSSEEECCBTTTBCCEEE
T ss_pred HHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----cCCCcCCccccccccccccCCCCChhhe
Confidence 368999999999999999 899999999999 9999999999976 6776543221 11 46799999
Q ss_pred cccccCCCC----------cccCCcCCCC--CchHHHHHHHHHHHHHHHHHHHHHHHHhhCCCChhhhHhhhccccccee
Q 022804 74 FYIATLPLH----------LRKTDLFHKL--PPSLRETLESYSAEMKKLAMTILGHMAKALRMDGEEMRDLFSDGVQSMR 141 (292)
Q Consensus 74 ~~~~~~~~~----------~~~~~~wP~~--~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~lr 141 (292)
|++...... ...+|.||+. +|+||+.+++|+++|.+|+.+||++||++|||++++|.+.++.+.+.||
T Consensus 104 ~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr 183 (331)
T 1odm_A 104 CYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHFKPDDTLAS 183 (331)
T ss_dssp EECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTGGGCCTTTCCCE
T ss_pred EecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCcHHHHH
Confidence 998753211 2358999987 9999999999999999999999999999999999999999988889999
Q ss_pred --eeecC------C---CCCCCC-cccccCCCCCCceEEEEeCCCCCceEEE-eCCeeEEccCCCCeEEEEechhhHHHh
Q 022804 142 --MNYYP------P---CPQPDK-VIGFSPHSDADALTILLQLDDTQGLQIR-NQGRWVPVKPLPNAFVINIGDIMEIVS 208 (292)
Q Consensus 142 --~~~Yp------~---~~~~~~-~~g~~~HtD~~~lTlL~q~~~~~GLqV~-~~g~W~~V~p~~g~lvVnvGd~l~~~T 208 (292)
++||| | |++++. .+|+++|||+|+||||+| ++++||||+ ++| |++|+|+||++||||||+||+||
T Consensus 184 ~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLQV~~~~g-Wi~V~p~pgalvVNiGD~l~~~T 261 (331)
T 1odm_A 184 VVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQ-SNVQNLQVETAAG-YQDIEADDTGYLINCGSYMAHLT 261 (331)
T ss_dssp EEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEE-CSSCCEEEEETTE-EEECCCCTTSEEEEECHHHHHHT
T ss_pred HHHhhCCCcccccccccCCCccccccccccccCCCeEEEEee-CCCCCEEEEcCCC-eEECCCCCCeEEEEccHHHHHHh
Confidence 99999 7 777776 899999999999999999 579999999 478 99999999999999999999999
Q ss_pred CCccccccceeecCCCCCeEEEEeeecCCCCCeeecCCCCCCCCCCCCCCCcCHHHHHHHHHHhhc
Q 022804 209 NGIYRSIEHRALVNSSKERLSIATFYSSRIDSELGPAPSLIGPSNPAIFRRMPLEEYFKEFFARRL 274 (292)
Q Consensus 209 ng~~~s~~HRVv~~~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~d~~~~~~~~~~ 274 (292)
||+|||+.|||+.+ +++|||++||++|+.|++|+|+++++++++ ++|++++++||++.++++.+
T Consensus 262 nG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~~e~l~~~~~~~~ 325 (331)
T 1odm_A 262 NNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSYGDYLQNGLVSLI 325 (331)
T ss_dssp TTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBHHHHHHHHHHHHH
T ss_pred CCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCccHHHHHHHHHHHHH
Confidence 99999999999864 789999999999999999999999999887 89999999999999988764
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.5e-66 Score=465.28 Aligned_cols=244 Identities=22% Similarity=0.375 Sum_probs=212.6
Q ss_pred HhhhhhhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhccccCCCccccccCc-ccc--ccccCCcccccccccC
Q 022804 3 HNFFFKLIKCVQVINHGVSSSLLEKLKFEIENFFKLPYEEKKKLWQVADNHEGFGQLF-VVS--EEQKLDWSDMFYIATL 79 (292)
Q Consensus 3 ~~~A~~~~Gff~l~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~~-~~~--~~~~~d~~e~~~~~~~ 79 (292)
..+||++||||||+|||||.++++++++.+++||+| |+|+++...+...+||.... .+. .....||+|.|.+.
T Consensus 18 l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~~e~~~~~~~~D~kE~~~~~-- 93 (280)
T 3on7_A 18 FVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASISETAKGHTVKDIKEYYHVY-- 93 (280)
T ss_dssp HHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC--------CCCCSCEEEEEC--
T ss_pred HHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCccccccCCCCcccHHHHHhcC--
Confidence 368999999999999999999999999999999998 89999987666689997654 222 22357999988762
Q ss_pred CCCcccCCcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCh--hh---hHhhhcccc-cceeeeecCCCCCCC-
Q 022804 80 PLHLRKTDLFHKLPPSLRETLESYSAEMKKLAMTILGHMAKALRMDG--EE---MRDLFSDGV-QSMRMNYYPPCPQPD- 152 (292)
Q Consensus 80 ~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~--~~---~~~~~~~~~-~~lr~~~Yp~~~~~~- 152 (292)
.||..+|+||+.+++|+++|.+|+.+||++||++||++. ++ |.+.+.++. +.||++|||||+.++
T Consensus 94 --------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~ 165 (280)
T 3on7_A 94 --------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLRILHYPPMTGDEE 165 (280)
T ss_dssp --------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTCSSCEEEEEEECCCCTTCC
T ss_pred --------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCCccceEEEEECCCCCCccc
Confidence 388888999999999999999999999999999999863 33 566665554 889999999998654
Q ss_pred -CcccccCCCCCCceEEEEeCCCCCceEEEe-CCeeEEccCCCCeEEEEechhhHHHhCCccccccceeecCC----CCC
Q 022804 153 -KVIGFSPHSDADALTILLQLDDTQGLQIRN-QGRWVPVKPLPNAFVINIGDIMEIVSNGIYRSIEHRALVNS----SKE 226 (292)
Q Consensus 153 -~~~g~~~HtD~~~lTlL~q~~~~~GLqV~~-~g~W~~V~p~~g~lvVnvGd~l~~~Tng~~~s~~HRVv~~~----~~~ 226 (292)
..+|+++|||+|+||||+| ++++||||+. +|+|++|+|.||++|||+||+||+||||+|||+.|||+.++ ..+
T Consensus 166 ~~~~g~~~HtD~g~lTlL~q-d~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~ 244 (280)
T 3on7_A 166 MGAIRAAAHEDINLITVLPT-ANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPEGTDKTKS 244 (280)
T ss_dssp CCSEEEEEECCCSSEEEEEC-CSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEECCTTCCTTSC
T ss_pred cCcccccCCCCCCeEEEEEe-cCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcccCCCceEeCCCCCCCCCC
Confidence 4689999999999999999 5799999995 89999999999999999999999999999999999999874 458
Q ss_pred eEEEEeeecCCCCCeeecCCCCCCCCCCCCCCCcCHHHHHHHHHHhh
Q 022804 227 RLSIATFYSSRIDSELGPAPSLIGPSNPAIFRRMPLEEYFKEFFARR 273 (292)
Q Consensus 227 R~Si~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~d~~~~~~~~~ 273 (292)
|||++||++|+.|++|+| ++|++||+..+++..
T Consensus 245 R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 245 RISLPLFLHPHPSVVLSE--------------RYTADSYLMERLREL 277 (280)
T ss_dssp EEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHHT
T ss_pred eEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHHh
Confidence 999999999999999974 699999999998764
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=96.35 E-value=0.014 Score=50.16 Aligned_cols=81 Identities=21% Similarity=0.151 Sum_probs=54.7
Q ss_pred ccceeeeecCCCCCCCCcccccCCCCCC-----------ceEEEEeCCC-----CCceEEEeCCeeEEccCCCCeEEEEe
Q 022804 137 VQSMRMNYYPPCPQPDKVIGFSPHSDAD-----------ALTILLQLDD-----TQGLQIRNQGRWVPVKPLPNAFVINI 200 (292)
Q Consensus 137 ~~~lr~~~Yp~~~~~~~~~g~~~HtD~~-----------~lTlL~q~~~-----~~GLqV~~~g~W~~V~p~~g~lvVnv 200 (292)
...+++++|.+. --..+|.|.. .+|+++.-++ .|.|.+.....=..|+|..|.+|+.-
T Consensus 98 ~e~~~~~rY~~G------~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~ 171 (243)
T 3dkq_A 98 FYPPLFNRYQGG------ETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYP 171 (243)
T ss_dssp EEEEEEEEECTT------CEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEE
T ss_pred cccceEEEECCC------CeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEEC
Confidence 345889999772 2246676653 4566655322 24466666444578999999999874
Q ss_pred chhhHHHhCCccccccceeecCCCCCeEEEEeeec
Q 022804 201 GDIMEIVSNGIYRSIEHRALVNSSKERLSIATFYS 235 (292)
Q Consensus 201 Gd~l~~~Tng~~~s~~HRVv~~~~~~R~Si~~F~~ 235 (292)
. .++|+|..-....|+++..+++
T Consensus 172 s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 172 S------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp T------------TSEEEECCEEEECEEEEEEEEE
T ss_pred C------------CCeEcCccccccCEEEEEEehh
Confidence 3 3689996544568999998875
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=95.22 E-value=0.33 Score=40.65 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=33.6
Q ss_pred CeeEEccCCCCeEEEEechhhHHHhCCccccccceeecCC-CCCeEEEEeeecCCC
Q 022804 184 GRWVPVKPLPNAFVINIGDIMEIVSNGIYRSIEHRALVNS-SKERLSIATFYSSRI 238 (292)
Q Consensus 184 g~W~~V~p~~g~lvVnvGd~l~~~Tng~~~s~~HRVv~~~-~~~R~Si~~F~~p~~ 238 (292)
..+..|.|.+|.+||.-+.+ .|.|.... +.+|+||+|-+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~l------------~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESWL------------RHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETTS------------CEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCCC------------EEeccCCCCCCCEEEEEEEeecCC
Confidence 35678999999999988752 69998754 368999999988765
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=93.10 E-value=0.28 Score=42.02 Aligned_cols=81 Identities=20% Similarity=0.313 Sum_probs=55.5
Q ss_pred ceeeeecCCCCCCCCcccccCCCCCC-----ceEEEEeCCC-------CCceEEEeCC--eeEEccCCCCeEEEEechhh
Q 022804 139 SMRMNYYPPCPQPDKVIGFSPHSDAD-----ALTILLQLDD-------TQGLQIRNQG--RWVPVKPLPNAFVINIGDIM 204 (292)
Q Consensus 139 ~lr~~~Yp~~~~~~~~~g~~~HtD~~-----~lTlL~q~~~-------~~GLqV~~~g--~W~~V~p~~g~lvVnvGd~l 204 (292)
-+.+.+|++. .-...+|.|.. .+|+++.-++ .|.|.+..++ ....|.|..|.+|+.-.+.
T Consensus 118 e~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~- 191 (247)
T 2hbt_A 118 KAMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR- 191 (247)
T ss_dssp CEEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST-
T ss_pred eEEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC-
Confidence 3667888751 12356677762 6788876222 3447787644 6789999999999887531
Q ss_pred HHHhCCccccccceeecCCCCCeEEEEeeec
Q 022804 205 EIVSNGIYRSIEHRALVNSSKERLSIATFYS 235 (292)
Q Consensus 205 ~~~Tng~~~s~~HRVv~~~~~~R~Si~~F~~ 235 (292)
-.+|.|.. ..+.|+||+..+.
T Consensus 192 ---------~~~H~V~p-~~~~R~sit~W~~ 212 (247)
T 2hbt_A 192 ---------RNPHEVQP-AYATRYAITVWYF 212 (247)
T ss_dssp ---------TCCEEECC-BSSCEEEEEEEEE
T ss_pred ---------Cceeeecc-CCCEEEEEEEEEc
Confidence 15899965 5579999988665
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=91.24 E-value=0.49 Score=39.62 Aligned_cols=89 Identities=18% Similarity=0.283 Sum_probs=54.4
Q ss_pred ceeeeecCCCCCCCCcccccCCCCC--------------CceEEEEeCCC--CCc-eEEEeCC-------------eeEE
Q 022804 139 SMRMNYYPPCPQPDKVIGFSPHSDA--------------DALTILLQLDD--TQG-LQIRNQG-------------RWVP 188 (292)
Q Consensus 139 ~lr~~~Yp~~~~~~~~~g~~~HtD~--------------~~lTlL~q~~~--~~G-LqV~~~g-------------~W~~ 188 (292)
.+++++|.+.. ...+|.|+ ..+|+|+.-++ .|| +.+...+ .-+.
T Consensus 99 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 47888887621 24566664 24788765332 233 4443211 2478
Q ss_pred ccCCCCeEEEEechhhHHHhCCcc-ccccceeecCCCCCeEEEEeeecCC
Q 022804 189 VKPLPNAFVINIGDIMEIVSNGIY-RSIEHRALVNSSKERLSIATFYSSR 237 (292)
Q Consensus 189 V~p~~g~lvVnvGd~l~~~Tng~~-~s~~HRVv~~~~~~R~Si~~F~~p~ 237 (292)
|.|..|.+|+.-- ...||.. ..++|+|..-....|+++..+++-.
T Consensus 173 V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 173 VKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp ECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred EecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 9999999887643 1123433 5789998654446899999887643
No 11
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=90.58 E-value=0.96 Score=37.45 Aligned_cols=81 Identities=11% Similarity=0.086 Sum_probs=53.0
Q ss_pred cceeeeecCCCCCCCCcccccCCCCCC--------ceEEEEeCCCCCceEEEeC----------CeeEEccCCCCeEEEE
Q 022804 138 QSMRMNYYPPCPQPDKVIGFSPHSDAD--------ALTILLQLDDTQGLQIRNQ----------GRWVPVKPLPNAFVIN 199 (292)
Q Consensus 138 ~~lr~~~Yp~~~~~~~~~g~~~HtD~~--------~lTlL~q~~~~~GLqV~~~----------g~W~~V~p~~g~lvVn 199 (292)
...-+|+|.+.. -++++|.|-. +.+|-+. ...-+.+... +..+.+...+|+++|.
T Consensus 100 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG--~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM 172 (204)
T 3s57_A 100 NFVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG--ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMM 172 (204)
T ss_dssp SEEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE--SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEE
T ss_pred ceeEEEEECCCC-----CcccceecChhhccCCCcEEEEECC--CceEEEEEEcCCCccccccCCceEEEECCCCCEEEE
Confidence 446689997721 2678888862 2344343 2233555431 2578899999999999
Q ss_pred echhhHHHhCCccccccceeecCC--CCCeEEEEee
Q 022804 200 IGDIMEIVSNGIYRSIEHRALVNS--SKERLSIATF 233 (292)
Q Consensus 200 vGd~l~~~Tng~~~s~~HRVv~~~--~~~R~Si~~F 233 (292)
-|++=..|. |.|-... ...|+|+.|-
T Consensus 173 ~g~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 173 NHPTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp ETTHHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred CchhhheeE--------eeccccCCCCCCEEEEEee
Confidence 998777776 6664322 3579999874
No 12
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=90.57 E-value=1.4 Score=36.65 Aligned_cols=80 Identities=15% Similarity=0.094 Sum_probs=52.0
Q ss_pred cceeeeecCCCCCCCCcccccCCCCC-----C--ceEEEEeCCCCCceEEEe---CCeeEEccCCCCeEEEEechhhHHH
Q 022804 138 QSMRMNYYPPCPQPDKVIGFSPHSDA-----D--ALTILLQLDDTQGLQIRN---QGRWVPVKPLPNAFVINIGDIMEIV 207 (292)
Q Consensus 138 ~~lr~~~Yp~~~~~~~~~g~~~HtD~-----~--~lTlL~q~~~~~GLqV~~---~g~W~~V~p~~g~lvVnvGd~l~~~ 207 (292)
...-+|+|.+ .-++++|.|- + ++||-+. ...-+.+.. .+....+...+|+++|.-|++= .|
T Consensus 105 n~~LvN~Y~~------G~~i~~H~D~~e~~~~~pI~svSLG--~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~ 175 (211)
T 3i3q_A 105 DACLINRYAP------GAKLSLHQDKDEPDLRAPIVSVSLG--LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF 175 (211)
T ss_dssp CEEEEEEECT------TCCEEEECCCCCSCTTSCEEEEEEE--SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC
T ss_pred CEEEEEEEcC------CCCcccccCCCccccCCCEEEEECC--CCeEEEEecccCCCceEEEECCCCCEEEECchHH-ce
Confidence 4467899976 2278899993 2 3344443 223355543 3578899999999999988752 12
Q ss_pred hCCccccccceeecCCC-------CCeEEEEeee
Q 022804 208 SNGIYRSIEHRALVNSS-------KERLSIATFY 234 (292)
Q Consensus 208 Tng~~~s~~HRVv~~~~-------~~R~Si~~F~ 234 (292)
.|.|..... ..|+|+.|-.
T Consensus 176 --------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 --------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp --------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred --------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 488754332 3599999864
No 13
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=90.35 E-value=0.89 Score=38.03 Aligned_cols=102 Identities=13% Similarity=0.090 Sum_probs=59.4
Q ss_pred HHHHHHhhCCCChhhhHhhhcccccceeeeecCCCCCCCCcccccCCCCCC-----------ceEEEEeCCC--CCc-eE
Q 022804 114 ILGHMAKALRMDGEEMRDLFSDGVQSMRMNYYPPCPQPDKVIGFSPHSDAD-----------ALTILLQLDD--TQG-LQ 179 (292)
Q Consensus 114 ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~-----------~lTlL~q~~~--~~G-Lq 179 (292)
|.+.|+..+|++.+. ...+++++|.+.. ...+|.|+. .+|+++.-++ .|| +.
T Consensus 95 i~~Ri~~~~gl~~~~--------~E~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~ 160 (216)
T 3itq_A 95 IEKRISSIMNVPASH--------GEGLHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETF 160 (216)
T ss_dssp HHHHHHHHHTSCGGG--------BCCCEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEE
T ss_pred HHHHHHHhcCceecc--------ccceeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeE
Confidence 334444456775321 2358888897621 245677753 3777776333 233 33
Q ss_pred EEeCCeeEEccCCCCeEEEEechhhHHHhCCc-cccccceeecCCCCCeEEEEeeec
Q 022804 180 IRNQGRWVPVKPLPNAFVINIGDIMEIVSNGI-YRSIEHRALVNSSKERLSIATFYS 235 (292)
Q Consensus 180 V~~~g~W~~V~p~~g~lvVnvGd~l~~~Tng~-~~s~~HRVv~~~~~~R~Si~~F~~ 235 (292)
..+. =+.|.|..|.+|+.-.- ..||. -..++|+|..-....|+++..+++
T Consensus 161 Fp~~--~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 161 FPKL--NLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp ETTT--TEEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred ecCC--CCEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEe
Confidence 3222 27899999998876531 11222 146799986544458999988765
No 14
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=90.05 E-value=1.4 Score=37.30 Aligned_cols=83 Identities=18% Similarity=0.138 Sum_probs=54.5
Q ss_pred cceeeeecCCCCCCCCcccccCCCCC--------CceEEEEeCCCCCceEEEe-C----------CeeEEccCCCCeEEE
Q 022804 138 QSMRMNYYPPCPQPDKVIGFSPHSDA--------DALTILLQLDDTQGLQIRN-Q----------GRWVPVKPLPNAFVI 198 (292)
Q Consensus 138 ~~lr~~~Yp~~~~~~~~~g~~~HtD~--------~~lTlL~q~~~~~GLqV~~-~----------g~W~~V~p~~g~lvV 198 (292)
...-+|+|++.. -++++|.|- .+.||-+. ...=+.+.. . +..+.+...+|+++|
T Consensus 126 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG--~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllv 198 (238)
T 2iuw_A 126 NSLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFG--ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLI 198 (238)
T ss_dssp CEEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEE--SCEEEEEEECCC--------CCCEEEEEECTTCEEE
T ss_pred CEEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECC--CCEEEEEeccCCccccCcccCCceEEEEcCCCCEEE
Confidence 456789998721 267888884 23344443 223344443 1 368899999999999
Q ss_pred EechhhHHHhCCccccccceeecC--CCCCeEEEEeeec
Q 022804 199 NIGDIMEIVSNGIYRSIEHRALVN--SSKERLSIATFYS 235 (292)
Q Consensus 199 nvGd~l~~~Tng~~~s~~HRVv~~--~~~~R~Si~~F~~ 235 (292)
.-|++=..|. |.|... ....|+|+.|=..
T Consensus 199 M~G~~r~~w~--------H~I~~~~~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 199 MEGATQADWQ--------HRVPKEYHSREPRVNLTFRTV 229 (238)
T ss_dssp EEETHHHHEE--------EEECCCSSCCCCEEEEEEECC
T ss_pred EChhhhCccE--------ecCCCcCCCCCCEEEEEeeec
Confidence 9999877776 555322 2468999998653
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=76.71 E-value=7.3 Score=34.84 Aligned_cols=106 Identities=17% Similarity=0.208 Sum_probs=66.5
Q ss_pred ccceeeeecCCCCCCCCcccccCCCCCC------ceEEEEeCCCCCceEEEe-CCeeEEccCCCCeEEEEechhhHHHhC
Q 022804 137 VQSMRMNYYPPCPQPDKVIGFSPHSDAD------ALTILLQLDDTQGLQIRN-QGRWVPVKPLPNAFVINIGDIMEIVSN 209 (292)
Q Consensus 137 ~~~lr~~~Yp~~~~~~~~~g~~~HtD~~------~lTlL~q~~~~~GLqV~~-~g~W~~V~p~~g~lvVnvGd~l~~~Tn 209 (292)
....-+|+|.+ .-++++|.|.. +.||-+. ...-+.+.. +|.++.+...+|+++|.-|++=..|.-
T Consensus 197 ~n~~lvN~Y~~------G~~I~~H~D~~~~~~~~I~slSLG--~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H 268 (345)
T 3tht_A 197 PDQMTINQYEP------GQGIPAHIDTHSAFEDEIVSLSLG--SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTH 268 (345)
T ss_dssp CSEEEEEEECT------TCCEEEECCCTTTBCSCEEEEEES--SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEE
T ss_pred CCEEEEEEecC------CCCEeeccCCchhcCCeEEEEECC--CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEc
Confidence 45577899976 23788999984 3333332 223355554 567999999999999999999888875
Q ss_pred Cccccccceeec------------------CCCCCeEEEEeeecCCCCCeeecCCCCCCC
Q 022804 210 GIYRSIEHRALV------------------NSSKERLSIATFYSSRIDSELGPAPSLIGP 251 (292)
Q Consensus 210 g~~~s~~HRVv~------------------~~~~~R~Si~~F~~p~~d~~i~p~~~~~~~ 251 (292)
|.-+-...-+-. .....|+|+.|=.-+...+... .|++++.
T Consensus 269 ~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~c~C~-~~~~cd~ 327 (345)
T 3tht_A 269 GITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCNCS-YPLVCDS 327 (345)
T ss_dssp EECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSCCCCS-CTTTCTT
T ss_pred cCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCCcCCC-CCCcccC
Confidence 554433332210 0123599999887665533222 2455554
No 16
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.32 E-value=7.3 Score=26.36 Aligned_cols=41 Identities=17% Similarity=0.170 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCCCChhhhHhhhcc
Q 022804 95 SLRETLESYSAEMKKLAMTILGHMAKALRMDGEEMRDLFSD 135 (292)
Q Consensus 95 ~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~ 135 (292)
.-+..++.|+..-.+-...-+..||+.+||+.+.....|.+
T Consensus 15 ~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFqN 55 (71)
T 2da7_A 15 DHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFEQ 55 (71)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHhh
Confidence 55778999999988888889999999999999888776653
No 17
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=40.53 E-value=94 Score=29.94 Aligned_cols=84 Identities=23% Similarity=0.239 Sum_probs=50.8
Q ss_pred eeeeecCCCCCCCCcccccCCCCC-C--ceEEEEeCC---------CCCceEEEeC--------CeeEEccCCCCeEEEE
Q 022804 140 MRMNYYPPCPQPDKVIGFSPHSDA-D--ALTILLQLD---------DTQGLQIRNQ--------GRWVPVKPLPNAFVIN 199 (292)
Q Consensus 140 lr~~~Yp~~~~~~~~~g~~~HtD~-~--~lTlL~q~~---------~~~GLqV~~~--------g~W~~V~p~~g~lvVn 199 (292)
+.+.+|++ .--...|.|. + .+|+++.-+ ..|.|+++.. .....|.|.-|++|+.
T Consensus 126 ~~~a~Y~~------G~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F 199 (633)
T 3kt7_A 126 MSINTYTK------GCHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFF 199 (633)
T ss_dssp EEEEEECT------TCEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEE
T ss_pred EEEEEeCC------CCeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEE
Confidence 55677866 2346778884 2 356655412 2344888752 1367899999999987
Q ss_pred echhhHHHhCCccccccceeecC-CCCCeEEEEeeec-CCC
Q 022804 200 IGDIMEIVSNGIYRSIEHRALVN-SSKERLSIATFYS-SRI 238 (292)
Q Consensus 200 vGd~l~~~Tng~~~s~~HRVv~~-~~~~R~Si~~F~~-p~~ 238 (292)
.-. -+ .+.|.|... +++.|+||+-.++ |..
T Consensus 200 ~vs------p~---~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 200 KVL------PG---FSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp ECC------TT---TCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred EcC------CC---CCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 531 01 246876321 2688999976554 443
No 18
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=37.58 E-value=27 Score=21.75 Aligned_cols=24 Identities=13% Similarity=0.279 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHhhCCCChhhh
Q 022804 106 EMKKLAMTILGHMAKALRMDGEEM 129 (292)
Q Consensus 106 ~~~~la~~ll~~la~~Lgl~~~~~ 129 (292)
.-.+|+..|.+++++.||.|++.+
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v 41 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 456789999999999999998643
No 19
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=34.63 E-value=39 Score=21.18 Aligned_cols=24 Identities=17% Similarity=0.173 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHhhCCCChhhh
Q 022804 106 EMKKLAMTILGHMAKALRMDGEEM 129 (292)
Q Consensus 106 ~~~~la~~ll~~la~~Lgl~~~~~ 129 (292)
.-.+|+..|.+++++.||.+++++
T Consensus 16 qk~~l~~~lt~~l~~~lg~~~~~v 39 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEPYEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHHHHhCCCcccE
Confidence 346788899999999999998653
No 20
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=32.76 E-value=55 Score=28.37 Aligned_cols=65 Identities=18% Similarity=0.264 Sum_probs=39.4
Q ss_pred ccccCCCCC--------CceEEEEeCCCCCceEEEeCCeeEEccCCCCe-EEEEechhhHHHhCCccccccceeecCCCC
Q 022804 155 IGFSPHSDA--------DALTILLQLDDTQGLQIRNQGRWVPVKPLPNA-FVINIGDIMEIVSNGIYRSIEHRALVNSSK 225 (292)
Q Consensus 155 ~g~~~HtD~--------~~lTlL~q~~~~~GLqV~~~g~W~~V~p~~g~-lvVnvGd~l~~~Tng~~~s~~HRVv~~~~~ 225 (292)
..+.+|.|. +.+-+...-...+|....-+|+-+.-++ |. .++| -+..|.|.+.+..
T Consensus 102 ~~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~--GE~w~~d-------------~~~~H~v~N~g~~ 166 (290)
T 1e5r_A 102 AIVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP--GEIWFLD-------------AATVHSAVNFSEI 166 (290)
T ss_dssp EEEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT--TEEEECC-------------TTSCEEEEESSSS
T ss_pred CEeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC--CCEEEEc-------------CCCeeEEEcCCCC
Confidence 357899998 2233333322346666666665444433 33 2222 2357999999989
Q ss_pred CeEEEEeee
Q 022804 226 ERLSIATFY 234 (292)
Q Consensus 226 ~R~Si~~F~ 234 (292)
+|+.+.+=+
T Consensus 167 ~RIhLv~D~ 175 (290)
T 1e5r_A 167 SRQSLCVDF 175 (290)
T ss_dssp CCCEEEEEE
T ss_pred CeEEEEEEe
Confidence 999988655
No 21
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=29.00 E-value=45 Score=20.64 Aligned_cols=23 Identities=9% Similarity=0.157 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHhhCCCChhh
Q 022804 106 EMKKLAMTILGHMAKALRMDGEE 128 (292)
Q Consensus 106 ~~~~la~~ll~~la~~Lgl~~~~ 128 (292)
.-.+|+..|.+++++.||++++.
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~~ 37 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEEK 37 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCcCe
Confidence 44688999999999999998753
No 22
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=28.91 E-value=45 Score=20.70 Aligned_cols=23 Identities=22% Similarity=0.190 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHhhCCCChhh
Q 022804 106 EMKKLAMTILGHMAKALRMDGEE 128 (292)
Q Consensus 106 ~~~~la~~ll~~la~~Lgl~~~~ 128 (292)
.-.+|+..|.+++++.||++++.
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~ 37 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLER 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 45688899999999999999753
No 23
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=27.07 E-value=16 Score=25.90 Aligned_cols=29 Identities=28% Similarity=0.307 Sum_probs=19.6
Q ss_pred ccCCCCeEEEEechhhHHHhCCccccccceeec
Q 022804 189 VKPLPNAFVINIGDIMEIVSNGIYRSIEHRALV 221 (292)
Q Consensus 189 V~p~~g~lvVnvGd~l~~~Tng~~~s~~HRVv~ 221 (292)
||..+..|.|.+ ..-|||+|||++.-|+.
T Consensus 38 vpigesrftisl----rktsngrykstlklvvp 66 (131)
T 2vf9_A 38 VPIGESRFTISL----RKTSNGRYKSTLKLVVP 66 (131)
T ss_dssp SCSSCEEEEEEE----EECTTSEEEEEEEEEEE
T ss_pred cccccceEEEEE----EecCCCceeeeEEEEEE
Confidence 333444455543 35699999999998864
No 24
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=24.27 E-value=61 Score=20.56 Aligned_cols=24 Identities=17% Similarity=0.152 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHhhCCCChhh
Q 022804 105 AEMKKLAMTILGHMAKALRMDGEE 128 (292)
Q Consensus 105 ~~~~~la~~ll~~la~~Lgl~~~~ 128 (292)
+.-.+|+..|.+++.+.||+|++.
T Consensus 14 eqk~~L~~~it~~~~~~lg~p~~~ 37 (65)
T 3ry0_A 14 QEVAALGEALTAAAHETLGTPVEA 37 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 455688999999999999998764
No 25
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=23.77 E-value=72 Score=16.99 Aligned_cols=14 Identities=29% Similarity=0.627 Sum_probs=10.8
Q ss_pred ceEEEeCCeeEEcc
Q 022804 177 GLQIRNQGRWVPVK 190 (292)
Q Consensus 177 GLqV~~~g~W~~V~ 190 (292)
-..|+++|.|+...
T Consensus 11 ~~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 11 QAYVRKFGEWVLLS 24 (27)
T ss_dssp CEEEEETTEEEEGG
T ss_pred ceeEEEcCeEEEcc
Confidence 35678899999764
No 26
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=22.31 E-value=70 Score=20.45 Aligned_cols=24 Identities=17% Similarity=0.203 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHhhCCCChhh
Q 022804 105 AEMKKLAMTILGHMAKALRMDGEE 128 (292)
Q Consensus 105 ~~~~~la~~ll~~la~~Lgl~~~~ 128 (292)
+.-.+|+..|.+++++.||++++.
T Consensus 17 eqK~~l~~~lt~~l~~~lg~p~~~ 40 (67)
T 3m21_A 17 EQKQQLIEGVSDLMVKVLNKNKAS 40 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHCcCccc
Confidence 345678889999999999998754
No 27
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=21.63 E-value=1.1e+02 Score=24.70 Aligned_cols=42 Identities=19% Similarity=0.245 Sum_probs=29.6
Q ss_pred EEEechhhHHHhCCcc----ccccceeecCCCCCeEEEEe-eecCCC
Q 022804 197 VINIGDIMEIVSNGIY----RSIEHRALVNSSKERLSIAT-FYSSRI 238 (292)
Q Consensus 197 vVnvGd~l~~~Tng~~----~s~~HRVv~~~~~~R~Si~~-F~~p~~ 238 (292)
.+.||+.-..|..|.. -|-.|.|.+.++..|+-+.+ |.+|+.
T Consensus 140 ~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL~~D~~rPdl 186 (197)
T 3rcq_A 140 KIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVWHPEL 186 (197)
T ss_dssp EEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEEEEEEEECTTS
T ss_pred EEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEEEEEeeeCCCC
Confidence 3456666667777764 36789999988889987765 456654
No 28
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=21.03 E-value=74 Score=21.00 Aligned_cols=25 Identities=16% Similarity=0.213 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHhhCCCChhhh
Q 022804 105 AEMKKLAMTILGHMAKALRMDGEEM 129 (292)
Q Consensus 105 ~~~~~la~~ll~~la~~Lgl~~~~~ 129 (292)
+.-.+|+..|.+++++.||++++..
T Consensus 15 eqk~~L~~~l~~~l~~~lgip~~~v 39 (76)
T 1gyx_A 15 QQKAALAADITDVIIRHLNSKDSSI 39 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHhCcCCceE
Confidence 3456889999999999999998643
No 29
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=20.86 E-value=65 Score=20.31 Aligned_cols=23 Identities=13% Similarity=0.187 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHhhCCCChhh
Q 022804 106 EMKKLAMTILGHMAKALRMDGEE 128 (292)
Q Consensus 106 ~~~~la~~ll~~la~~Lgl~~~~ 128 (292)
.-.+|+..|.+++++.||++++.
T Consensus 14 qK~~L~~~it~~~~~~lg~~~~~ 36 (62)
T 3m20_A 14 KKREFVERLTSVAAEIYGMDRSA 36 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHHHHHHHHhCcCcce
Confidence 44688899999999999998754
No 30
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=20.69 E-value=75 Score=20.68 Aligned_cols=24 Identities=21% Similarity=0.173 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHhhCCCChhh
Q 022804 105 AEMKKLAMTILGHMAKALRMDGEE 128 (292)
Q Consensus 105 ~~~~~la~~ll~~la~~Lgl~~~~ 128 (292)
+.-.+|+..|.+++++.||++++.
T Consensus 15 eqK~~L~~~it~~l~~~lg~p~~~ 38 (72)
T 3mb2_A 15 EQKAELARALSAAAAAAFDVPLAE 38 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc
Confidence 345688899999999999999764
No 31
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=20.34 E-value=37 Score=24.01 Aligned_cols=33 Identities=12% Similarity=0.255 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhhCCCChhhhHhhhc-ccccceee
Q 022804 110 LAMTILGHMAKALRMDGEEMRDLFS-DGVQSMRM 142 (292)
Q Consensus 110 la~~ll~~la~~Lgl~~~~~~~~~~-~~~~~lr~ 142 (292)
=+.+||+.+|+.|++|..+|.+.-- .+.-++|+
T Consensus 18 eG~~l~~~la~ll~l~~~~Ft~i~V~g~aVTFrV 51 (91)
T 2qt7_A 18 AGVKLLEILAEHVHMSSGSFINISVVGPALTFRI 51 (91)
T ss_dssp HHHHHHHHHHHHHTSCGGGEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHhcCCccceeeeEeecceEEEEe
Confidence 3678999999999999998887643 23344555
Done!