Your job contains 1 sequence.
>022805
MVYIPEGEFLSRIGPTEFYKDLEKYASKNAVQDWKKLLDAILPLSATATALPPLSIRGDL
GVLSTVAARYAPSLLKSFIQMGPQGALGATKLLRPFSEIVDSLELEDPFGLREDLGIHHI
VVNDWDRGVDADQNVVLISVPSVLSPDLAPPGKHVLHAYTPGTEPFELWKGLDPRSAEYK
KLKAERSEVIWRAVERALGPGFSRDKCDVKLVGTPLTHQRFLRRNRGTYGPAIQAGKETF
PGHSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVSQHSELLDAIGI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022805
(292 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2009395 - symbol:AT1G57770 species:3702 "Arabi... 784 3.4e-126 2
UNIPROTKB|Q10AT7 - symbol:Os03g0841900 "Os03g0841900 prot... 783 3.1e-123 2
UNIPROTKB|A8J3K3 - symbol:CHLREDRAFT_130438 "Predicted pr... 563 4.1e-73 2
UNIPROTKB|A8J7T2 - symbol:CHLREDRAFT_176572 "Predicted pr... 461 1.0e-43 1
TAIR|locus:2033055 - symbol:CRTISO "carotenoid isomerase"... 280 1.0e-23 1
UNIPROTKB|Q0IS25 - symbol:Os11g0572700 "Os11g0572700 prot... 274 4.7e-23 1
UNIPROTKB|A8J9E9 - symbol:CHLREDRAFT_196597 "Carotenoid i... 259 1.7e-21 1
>TAIR|locus:2009395 [details] [associations]
symbol:AT1G57770 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0016117 "carotenoid
biosynthetic process" evidence=IBA] [GO:0016491 "oxidoreductase
activity" evidence=IEA;ISS] [GO:0046608 "carotenoid isomerase
activity" evidence=IBA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA]
InterPro:IPR014101 EMBL:CP002684 GO:GO:0009507 GO:GO:0016117
eggNOG:COG1233 GO:GO:0046608 PANTHER:PTHR10668:SF30 EMBL:AC079732
OMA:PQCESFM ProtClustDB:CLSN2690470 EMBL:AY065278 EMBL:AY133831
IPI:IPI00524521 PIR:A96612 RefSeq:NP_176088.2 UniGene:At.28533
ProteinModelPortal:Q9FVR9 SMR:Q9FVR9 STRING:Q9FVR9 PaxDb:Q9FVR9
PRIDE:Q9FVR9 EnsemblPlants:AT1G57770.1 GeneID:842152
KEGG:ath:AT1G57770 TAIR:At1g57770 InParanoid:Q9FVR9
PhylomeDB:Q9FVR9 ArrayExpress:Q9FVR9 Genevestigator:Q9FVR9
Uniprot:Q9FVR9
Length = 574
Score = 784 (281.0 bits), Expect = 3.4e-126, Sum P(2) = 3.4e-126
Identities = 147/186 (79%), Positives = 160/186 (86%)
Query: 107 DPFGLREDLGIHHIVVNDWDRGVDADQNXXXXXXXXXXXXDLAPPGKHVLHAYTPGTEPF 166
D G+ +DL IHHIVVNDWDRGVDADQN +LAPPGKHVLHAY PGTEPF
Sbjct: 389 DAEGIADDLEIHHIVVNDWDRGVDADQNVVLISVPSVLSPNLAPPGKHVLHAYCPGTEPF 448
Query: 167 ELWKGLDPRSAEYKKLKAERSEVIWRAVERALGPGFSRDKCDVKLVGTPLTHQRFLRRNR 226
LW+GLD RSAEYK LK++RSEV+WRAVERALG GF R+KC+V LVGTPLTHQRFLRRNR
Sbjct: 449 GLWEGLDRRSAEYKNLKSQRSEVMWRAVERALGLGFKREKCEVSLVGTPLTHQRFLRRNR 508
Query: 227 GTYGPAIQAGKETFPGHSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVSQHSEL 286
GTYGPAI+AGK TFPGHSTPIPQL CCGDSTFPGIGVPAVAASGAIVANSLV VS+HS+L
Sbjct: 509 GTYGPAIEAGKGTFPGHSTPIPQLLCCGDSTFPGIGVPAVAASGAIVANSLVPVSKHSQL 568
Query: 287 LDAIGI 292
LDAIG+
Sbjct: 569 LDAIGL 574
Score = 476 (172.6 bits), Expect = 3.4e-126, Sum P(2) = 3.4e-126
Identities = 92/109 (84%), Positives = 103/109 (94%)
Query: 1 MVYIPEGEFLSRIGPTEFYKDLEKYASKNAVQDWKKLLDAILPLSATATALPPLSIRGDL 60
MVY+PEG+FLSRIGPT+F+KDLEKYA +AVQ+W+KLL AILPLS+ A ALPPLSIRGDL
Sbjct: 141 MVYLPEGDFLSRIGPTDFFKDLEKYAGPSAVQEWEKLLGAILPLSSAAMALPPLSIRGDL 200
Query: 61 GVLSTVAARYAPSLLKSFIQMGPQGALGATKLLRPFSEIVDSLELEDPF 109
GVLST AARYAPSLLKSFI+MGP+GALGATKLLRPFSEIVDSLEL+DPF
Sbjct: 201 GVLSTAAARYAPSLLKSFIKMGPKGALGATKLLRPFSEIVDSLELKDPF 249
>UNIPROTKB|Q10AT7 [details] [associations]
symbol:Os03g0841900 "Os03g0841900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0009507 "chloroplast"
evidence=ISS] [GO:0016117 "carotenoid biosynthetic process"
evidence=ISS] [GO:0046608 "carotenoid isomerase activity"
evidence=ISS] InterPro:IPR014101 GO:GO:0009507 EMBL:DP000009
EMBL:AP008209 GO:GO:0016117 EMBL:CM000140 eggNOG:COG1233
GO:GO:0046608 PANTHER:PTHR10668:SF30 RefSeq:NP_001051855.1
UniGene:Os.22483 STRING:Q10AT7 EnsemblPlants:LOC_Os03g62510.1
GeneID:4334739 KEGG:osa:4334739 OMA:PQCESFM ProtClustDB:CLSN2690470
Uniprot:Q10AT7
Length = 597
Score = 783 (280.7 bits), Expect = 3.1e-123, Sum P(2) = 3.1e-123
Identities = 149/209 (71%), Positives = 171/209 (81%)
Query: 84 QGALGATKLLRPFSEIVDSLELEDPFGLREDLGIHHIVVNDWDRGVDADQNXXXXXXXXX 143
Q + AT F + ++E+ REDLGIHHIVVNDW++GVDADQN
Sbjct: 392 QDKVKATPQCESFMHLHLGFDVENA---REDLGIHHIVVNDWNKGVDADQNVVLISVPTV 448
Query: 144 XXXDLAPPGKHVLHAYTPGTEPFELWKGLDPRSAEYKKLKAERSEVIWRAVERALGPGFS 203
LAPPGKHVLHAYTPGTEPF LW+GLD +SAEY++LK ERSEV+W+AVE ALGP FS
Sbjct: 449 LGNGLAPPGKHVLHAYTPGTEPFSLWEGLDRKSAEYRRLKEERSEVMWKAVELALGPRFS 508
Query: 204 RDKCDVKLVGTPLTHQRFLRRNRGTYGPAIQAGKETFPGHSTPIPQLYCCGDSTFPGIGV 263
R+KCDVKLVG+PLTH+RFLRRNRGTYGPAI+AG+ TFPG +TPIPQL+CCGDSTFPGIGV
Sbjct: 509 REKCDVKLVGSPLTHKRFLRRNRGTYGPAIKAGEATFPGQATPIPQLFCCGDSTFPGIGV 568
Query: 264 PAVAASGAIVANSLVSVSQHSELLDAIGI 292
PAVAASGAIVAN+LVSVSQHSELLDA+GI
Sbjct: 569 PAVAASGAIVANTLVSVSQHSELLDAVGI 597
Score = 449 (163.1 bits), Expect = 3.1e-123, Sum P(2) = 3.1e-123
Identities = 85/109 (77%), Positives = 99/109 (90%)
Query: 1 MVYIPEGEFLSRIGPTEFYKDLEKYASKNAVQDWKKLLDAILPLSATATALPPLSIRGDL 60
MVY+PEG+FLSRIGPT+F KDL+++ +AVQ+WKKLLDA++P+SA A ALPPLSIRGDL
Sbjct: 164 MVYVPEGQFLSRIGPTDFLKDLDEFVGADAVQEWKKLLDAVIPISAAAMALPPLSIRGDL 223
Query: 61 GVLSTVAARYAPSLLKSFIQMGPQGALGATKLLRPFSEIVDSLELEDPF 109
GVLST A RYAPSLLKS +QMGPQGALGATKLLRPFSEIVDSL L++PF
Sbjct: 224 GVLSTSAGRYAPSLLKSILQMGPQGALGATKLLRPFSEIVDSLGLKNPF 272
Score = 37 (18.1 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 72 PSLLKSFIQMGPQGALGATKLLRPFSEIVDSL 103
PSL F GPQ P ++++D+L
Sbjct: 128 PSLFSGFQSRGPQA--------NPLAQVLDAL 151
>UNIPROTKB|A8J3K3 [details] [associations]
symbol:CHLREDRAFT_130438 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0009507 "chloroplast" evidence=ISS]
[GO:0016117 "carotenoid biosynthetic process" evidence=ISS]
[GO:0046608 "carotenoid isomerase activity" evidence=ISS]
InterPro:IPR014101 GO:GO:0009507 GO:GO:0016117 eggNOG:COG1233
GO:GO:0046608 PANTHER:PTHR10668:SF30 EMBL:DS496135
RefSeq:XP_001695939.1 UniGene:Cre.3256 ProteinModelPortal:A8J3K3
ProMEX:A8J3K3 EnsemblPlants:EDP01276 GeneID:5721453
KEGG:cre:CHLREDRAFT_130438 OMA:ANEPWER ProtClustDB:CLSN2922292
Uniprot:A8J3K3
Length = 558
Score = 563 (203.2 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
Identities = 110/186 (59%), Positives = 130/186 (69%)
Query: 107 DPFGLREDLGIHHIVVNDWDRGVDADQNXXXXXXXXXXXXDLAPPGKHVLHAYTPGTEPF 166
D GL L +HHIVVN W+ GVD QN +AP GKH LHAY P TEP+
Sbjct: 375 DAKGLDPGLELHHIVVNRWEGGVDQPQNVVLISIPSVKDPSMAPAGKHCLHAYLPATEPY 434
Query: 167 ELWKGLDPRSAEYKKLKAERSEVIWRAVERALGPGFSRDKCDVKLVGTPLTHQRFLRRNR 226
E+WKGLD RS EY KLK ERS+V+W VE+ + P R + ++ VGTPLTH+RFLRR+R
Sbjct: 435 EIWKGLDRRSLEYAKLKEERSQVLWAGVEKVI-PDI-RKRAELSSVGTPLTHERFLRRHR 492
Query: 227 GTYGPAIQAGKETFPGHSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVSQHSEL 286
G+YGPAIQAGK FPG +TPIP LY GDSTFPGIG+PAVAASG I AN+L V H +L
Sbjct: 493 GSYGPAIQAGKALFPGPTTPIPGLYMTGDSTFPGIGLPAVAASGTIAANTLAPVWDHWKL 552
Query: 287 LDAIGI 292
LD IG+
Sbjct: 553 LDEIGL 558
Score = 194 (73.4 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
Identities = 43/108 (39%), Positives = 61/108 (56%)
Query: 2 VYIPEGEFLSRIGPTEFYKDLEKYASKNAVQDWKKLLDAILPLSATATALPPLSIRGDLG 61
V +PEG FL+RIG F + L++ A+ +W +L + + PL+ AT +PP + R D G
Sbjct: 135 VVVPEGTFLTRIGNDNFVEVLKQIRGPEAMAEWARLQEVMRPLAKAATMIPPAAFRYDPG 194
Query: 62 VLSTVAARYAPSLLKSFIQMGPQGALGATKLLRPFSEIVDSLELEDPF 109
L T RY PSLL+S GP A KL PF+ ++D + DPF
Sbjct: 195 ALVTAIGRYLPSLLES----GPNAA----KLSGPFAGVLDGANIRDPF 234
>UNIPROTKB|A8J7T2 [details] [associations]
symbol:CHLREDRAFT_176572 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0009507 "chloroplast" evidence=ISS]
[GO:0016117 "carotenoid biosynthetic process" evidence=ISS]
[GO:0046608 "carotenoid isomerase activity" evidence=ISS]
InterPro:IPR014101 GO:GO:0009507 GO:GO:0016117 eggNOG:COG1233
GO:GO:0046608 PANTHER:PTHR10668:SF30 EMBL:DS496142
RefSeq:XP_001697619.1 ProteinModelPortal:A8J7T2 GeneID:5723233
KEGG:cre:CHLREDRAFT_176572 ProtClustDB:CLSN2922724 Uniprot:A8J7T2
Length = 566
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 106/227 (46%), Positives = 130/227 (57%)
Query: 53 PLSIRGDLGVLSTVAARYAPSLLKSFIQMGPQGALGATKLLRPFSEIVDSLELE-DPFGL 111
P IR GV+S + LL P+ T L P + L L D GL
Sbjct: 344 PEFIRARCGVVSNASVWDTQRLLPP--GAAPE-QWRRTSLKTPALDSFVHLHLGIDATGL 400
Query: 112 REDLGIHHIVVNDWDRGVDADQNXXXXXXXXXXXXDLAPPGKHVLHAYTPGTEPFELWKG 171
DL HH+VVN W++ + QN LAPPGK +H Y EP++LW G
Sbjct: 401 PPDLECHHLVVNSWEQ-LTGPQNVIIASVPTVFDPSLAPPGKATVHCYCAANEPYDLWAG 459
Query: 172 LDPRSAEYKKLKAERSEVIWRAVERALGPGFSRDKCDVKLVGTPLTHQRFLRRNRGTYGP 231
LD RS EYK LK ER+E +W A+ER + P RD+ ++KLVG+PLTHQRF+RR+RG+YGP
Sbjct: 460 LDRRSPEYKALKEERAEPLWEALERFI-PDI-RDRTELKLVGSPLTHQRFVRRHRGSYGP 517
Query: 232 AIQA-GKETFPGHSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSL 277
I A G +PG TP+P L CGDS PGIGVPA AASG I ANSL
Sbjct: 518 GISAAGGAGWPGPKTPVPGLTVCGDSCMPGIGVPAAAASGMIAANSL 564
>TAIR|locus:2033055 [details] [associations]
symbol:CRTISO "carotenoid isomerase" species:3702
"Arabidopsis thaliana" [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IBA;TAS]
[GO:0016117 "carotenoid biosynthetic process" evidence=IEA;IGI;TAS]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0009662 "etioplast organization"
evidence=IMP] [GO:0046608 "carotenoid isomerase activity"
evidence=IGI;IMP] UniPathway:UPA00803 InterPro:IPR014101
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0031969
GO:GO:0016117 EMBL:AC011001 EMBL:BX813870 IPI:IPI00534972
PIR:A86203 RefSeq:NP_172167.2 UniGene:At.47600 UniGene:At.51507
UniGene:At.67219 ProteinModelPortal:Q9M9Y8 SMR:Q9M9Y8 STRING:Q9M9Y8
PaxDb:Q9M9Y8 PRIDE:Q9M9Y8 EnsemblPlants:AT1G06820.1 GeneID:837193
KEGG:ath:AT1G06820 TAIR:At1g06820 eggNOG:COG1233
HOGENOM:HOG000150223 InParanoid:Q9M9Y8 KO:K09835 OMA:AVGRKME
PhylomeDB:Q9M9Y8 ProtClustDB:CLSN2680687
BioCyc:ARA:AT1G06820-MONOMER BioCyc:MetaCyc:AT1G06820-MONOMER
Genevestigator:Q9M9Y8 GermOnline:AT1G06820 GO:GO:0046608
GO:GO:0009662 PANTHER:PTHR10668:SF30 TIGRFAMs:TIGR02730
Uniprot:Q9M9Y8
Length = 595
Score = 280 (103.6 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 72/189 (38%), Positives = 102/189 (53%)
Query: 111 LREDLGIHHIVV-NDWDRGVDADQNXXXXXXXXXXXXDLAPPGKHVLHAYTPGTEPFELW 169
L D HH V+ +DW + ++ LAP G+H+LH +T T E W
Sbjct: 403 LPPDTDCHHFVLEDDW-KNLEEPYGSIFLSIPTILDSSLAPDGRHILHIFT--TSSIEDW 459
Query: 170 KGLDPRSAEYKKLKAERSEVIWRAVERALGPGFSRDKCDVKLVGTPLTHQRFLRRNRGTY 229
+GL P+ E KK + + +I R +E+ L PG S K VGTP TH+RFL R++GTY
Sbjct: 460 EGLPPKEYEAKK-EDVAARIIQR-LEKKLFPGLS-SSITFKEVGTPRTHRRFLARDKGTY 516
Query: 230 GPAIQA---GKETFPGHSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSL---VSVSQH 283
GP + G P ++T I LYC GDS FPG GV AVA SG + A+ + + + +
Sbjct: 517 GPMPRGTPKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKK 576
Query: 284 SELLDAIGI 292
S +LD +G+
Sbjct: 577 SRVLD-VGL 584
>UNIPROTKB|Q0IS25 [details] [associations]
symbol:Os11g0572700 "Os11g0572700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0009507 "chloroplast"
evidence=ISS] [GO:0016117 "carotenoid biosynthetic process"
evidence=ISS] [GO:0046608 "carotenoid isomerase activity"
evidence=ISS] InterPro:IPR014101 GO:GO:0009507 EMBL:AP008217
GO:GO:0016117 KO:K09835 ProtClustDB:CLSN2680687 GO:GO:0046608
PANTHER:PTHR10668:SF30 RefSeq:NP_001068127.1 UniGene:Os.69031
STRING:Q0IS25 PRIDE:Q0IS25 GeneID:4350758 KEGG:osa:4350758
Gramene:Q0IS25 Uniprot:Q0IS25
Length = 602
Score = 274 (101.5 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 73/186 (39%), Positives = 99/186 (53%)
Query: 111 LREDLGIHHIVV-NDWDRGVDADQNXXXXXXXXXXXXDLAPPGKHVLHAYTPGTEPFELW 169
L D HH V+ +DW ++ LAP G H+LH +T T E W
Sbjct: 410 LPADTDCHHFVLEDDW-ANLEKPYGSIFLSIPTVLDPSLAPEGHHILHIFT--TAGIEDW 466
Query: 170 KGLDPRSAEYKKLKAERSEVIWRAVERALGPGFSRDKCDVKLVGTPLTHQRFLRRNRGTY 229
+GL + E KK + +E+I R +E+ L PG +D +K VG+P TH+RFL RN GTY
Sbjct: 467 EGLSRKDYEKKK-ELVATEIIKR-LEKKLFPGL-QDSIVLKEVGSPKTHRRFLARNDGTY 523
Query: 230 GPAIQA---GKETFPGHSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSL---VSVSQH 283
GP + G P ++T I LYC GDS FPG GV AVA SG + A+ + + + Q
Sbjct: 524 GPMPRGKPKGLLAMPFNTTSIDGLYCVGDSCFPGQGVIAVAFSGIMCAHRVAADIGLEQR 583
Query: 284 SELLDA 289
S +LDA
Sbjct: 584 SPVLDA 589
>UNIPROTKB|A8J9E9 [details] [associations]
symbol:CHLREDRAFT_196597 "Carotenoid isomerase"
species:3055 "Chlamydomonas reinhardtii" [GO:0009507 "chloroplast"
evidence=ISS] [GO:0016117 "carotenoid biosynthetic process"
evidence=ISS] [GO:0046608 "carotenoid isomerase activity"
evidence=ISS] InterPro:IPR014101 GO:GO:0009507 GO:GO:0016117
eggNOG:COG1233 ProtClustDB:CLSN2680687 GO:GO:0046608 GO:GO:0009662
PANTHER:PTHR10668:SF30 TIGRFAMs:TIGR02730 EMBL:DS496146
RefSeq:XP_001698231.1 ProteinModelPortal:A8J9E9 STRING:A8J9E9
PRIDE:A8J9E9 EnsemblPlants:EDO99516 GeneID:5723787
KEGG:cre:CHLREDRAFT_196597 Uniprot:A8J9E9
Length = 568
Score = 259 (96.2 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 63/156 (40%), Positives = 84/156 (53%)
Query: 118 HHIVVNDWDRGVDADQNXXXXXXXXXXXXDLAPPGKHVLHAYTPGTEPFELWKGLDPRSA 177
HHIV+ DW + ++ + LAPPG H++HA+ P + E W+GL
Sbjct: 408 HHIVLEDWAK-MEKARGVLFVSLPTVLDPSLAPPGNHIVHAFVP--DWIEDWQGLSVE-- 462
Query: 178 EYKKLKAERSEVIWRAVERALGPGFSRDKCDVKLVGTPLTHQRFLRRNRGTYGPAIQA-- 235
EY+ K ++ I R ++ L PG S + + VGTP TH+RFL R GTYGP
Sbjct: 463 EYEAKKEAVADDICRRLDAIL-PGLSSN-ITFREVGTPRTHRRFLNREDGTYGPIPSRRP 520
Query: 236 -GKETFPGHSTPIPQLYCCGDSTFPGIGVPAVAASG 270
G + P ++T IP LYC GDS FPG GV AV SG
Sbjct: 521 LGMLSMPFNTTDIPGLYCVGDSAFPGQGVNAVVFSG 556
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.138 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 292 280 0.00082 115 3 11 22 0.39 34
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 612 (65 KB)
Total size of DFA: 203 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.15u 0.12s 21.27t Elapsed: 00:00:01
Total cpu time: 21.15u 0.12s 21.27t Elapsed: 00:00:01
Start: Fri May 10 20:11:43 2013 End: Fri May 10 20:11:44 2013