Citrus Sinensis ID: 022808

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290--
MCVRICAGQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAVYAFWDPFHPSERANGFIVQEFMTGSTEYMYPMNLSTIMALDSRT
cccccccccccccccccccccccccccccccccHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccEEEEEcccHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEcccccHHHHHHHHHHHHHHcccccccccccHHHHHcccccc
ccEEEccccccccccccccccccccccHHEEEEEEccccccccccccHHHHcEccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcEEEEEEccccHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHcHHHcccEEEcccccccccccEEEEcccccccccccccEEEEcccccHHHHHHHHHHHHHcccccccccccHHHHHHHcccc
mcvricagqhigseptlpylspeltgsrllvganfasagigilndtgiQFVNIIRMFRQFEYFQEYQNRVTAligpqrtkqLVNGALILITVggndfvnnyylvpysarsrqfslpDYVKYVISEYRKLLTRLYDLGarrvlvtgtgplgcvpaeramrgrngqCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKmqynfisnprafgfttskvaccgqgpynglglctpasnlcpnravyafwdpfhpserangFIVQefmtgsteymypmnlstimaldsrt
mcvricagqhigseptlpylsPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYsarsrqfslPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAVYAFWDPFHPSERANGFIVQEFMTGSTEYMYPMNLSTIMALDSRT
MCVRICAGQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAVYAFWDPFHPSERANGFIVQEFMTGSTEYMYPMNLSTIMALDSRT
**VRICAGQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAVYAFWDPFHPSERANGFIVQEFMTGSTEYMYPMNLSTIM******
MCVRICAGQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTA*IGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAVYAFWDPFHPSERANGFIVQEFMTGSTEYMYPMNLSTIMALD***
MCVRICAGQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAVYAFWDPFHPSERANGFIVQEFMTGSTEYMYPMNLSTIMALDSRT
MCVRICAGQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAVYAFWDPFHPSERANGFIVQEFMTGSTEYMYPMNLSTIMALDS**
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ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MCVRICAGQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAVYAFWDPFHPSERANGFIVQEFMTGSTEYMYPMNLSTIMALDSRT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query292 2.2.26 [Sep-21-2011]
Q8LB81366 GDSL esterase/lipase At5g yes no 0.972 0.775 0.690 1e-122
Q9M8Y5366 GDSL esterase/lipase LTL1 no no 0.965 0.770 0.687 1e-116
Q9SVU5367 GDSL esterase/lipase At4g no no 0.965 0.768 0.658 1e-110
Q5PNZ0362 GDSL esterase/lipase At5g no no 0.945 0.762 0.667 1e-110
O23470368 GDSL esterase/lipase At4g no no 0.958 0.760 0.376 2e-49
O80470387 GDSL esterase/lipase At2g no no 0.952 0.718 0.356 7e-48
Q9M2R9374 GDSL esterase/lipase At3g no no 0.938 0.732 0.354 4e-43
Q8LFJ9364 GDSL esterase/lipase 7 OS no no 0.972 0.780 0.322 4e-41
Q9FHQ1356 GDSL esterase/lipase At5g no no 0.856 0.702 0.347 2e-40
Q9FVV1374 GDSL esterase/lipase At1g no no 0.945 0.737 0.323 2e-40
>sp|Q8LB81|GDL79_ARATH GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana GN=At5g33370 PE=2 SV=1 Back     alignment and function desciption
 Score =  436 bits (1121), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 196/284 (69%), Positives = 242/284 (85%)

Query: 9   QHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQN 68
           +H+G E  +PYLSP L   +LL GANFASAGIGILNDTGIQF+NIIR+ +Q EYF++Y+ 
Sbjct: 83  EHLGQESPMPYLSPMLKKDKLLRGANFASAGIGILNDTGIQFLNIIRITKQLEYFEQYKV 142

Query: 69  RVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRK 128
           RV+ L+G +   +LVNGAL+LIT+GGNDFVNNYYLVP+SARSRQFSLPDYV +VISEYRK
Sbjct: 143 RVSGLVGEEEMNRLVNGALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVFVISEYRK 202

Query: 129 LLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLN 188
           +L ++YDLGARRVLVTGTGP+GCVPAE A R RNG+CA +LQRAA L+NPQL+Q++ DLN
Sbjct: 203 VLRKMYDLGARRVLVTGTGPMGCVPAELAQRSRNGECATELQRAASLFNPQLIQMITDLN 262

Query: 189 SQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAV 248
           ++ GS  F+A NT +M  +FIS+P+A+GF TSKVACCGQGPYNG+GLCTP SNLCPNR +
Sbjct: 263 NEVGSSAFIAANTQQMHMDFISDPQAYGFVTSKVACCGQGPYNGIGLCTPLSNLCPNRDL 322

Query: 249 YAFWDPFHPSERANGFIVQEFMTGSTEYMYPMNLSTIMALDSRT 292
           +AFWDPFHPSE+A+  I Q+ + GS EYM+PMNLSTI+ +DS T
Sbjct: 323 FAFWDPFHPSEKASRIIAQQILNGSPEYMHPMNLSTILTVDSMT 366

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q9M8Y5|LTL1_ARATH GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SVU5|GDL67_ARATH GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana GN=At4g28780 PE=2 SV=1 Back     alignment and function description
>sp|Q5PNZ0|GDL77_ARATH GDSL esterase/lipase At5g18430 OS=Arabidopsis thaliana GN=At5g18430 PE=2 SV=1 Back     alignment and function description
>sp|O23470|GDL64_ARATH GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=3 SV=2 Back     alignment and function description
>sp|O80470|GDL38_ARATH GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana GN=At2g23540 PE=2 SV=1 Back     alignment and function description
>sp|Q9M2R9|GDL58_ARATH GDSL esterase/lipase At3g50400 OS=Arabidopsis thaliana GN=At3g50400 PE=2 SV=1 Back     alignment and function description
>sp|Q8LFJ9|GLIP7_ARATH GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1 Back     alignment and function description
>sp|Q9FHQ1|GDL80_ARATH GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana GN=At5g37690 PE=2 SV=1 Back     alignment and function description
>sp|Q9FVV1|GDL28_ARATH GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana GN=At1g71250 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query292
224144643367 predicted protein [Populus trichocarpa] 0.972 0.773 0.778 1e-133
255562025368 zinc finger protein, putative [Ricinus c 0.969 0.769 0.784 1e-131
255646252363 unknown [Glycine max] 0.969 0.779 0.756 1e-129
356506016365 PREDICTED: GDSL esterase/lipase At5g3337 0.965 0.772 0.762 1e-129
255562023364 zinc finger protein, putative [Ricinus c 0.972 0.780 0.753 1e-129
356574859371 PREDICTED: GDSL esterase/lipase At5g3337 0.969 0.762 0.752 1e-128
255562027369 zinc finger protein, putative [Ricinus c 0.972 0.769 0.771 1e-128
359476529371 PREDICTED: GDSL esterase/lipase At5g3337 0.972 0.765 0.75 1e-128
147788312369 hypothetical protein VITISV_038831 [Viti 0.972 0.769 0.75 1e-128
296085157367 unnamed protein product [Vitis vinifera] 0.972 0.773 0.75 1e-128
>gi|224144643|ref|XP_002325360.1| predicted protein [Populus trichocarpa] gi|222862235|gb|EEE99741.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 221/284 (77%), Positives = 254/284 (89%)

Query: 9   QHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQN 68
           QH+GSE TLPYLSPELTG RLLVGANFASAGIGILNDTGIQF+NIIRM++Q EYF++YQ 
Sbjct: 84  QHLGSELTLPYLSPELTGQRLLVGANFASAGIGILNDTGIQFLNIIRMYKQLEYFEQYQR 143

Query: 69  RVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRK 128
           RVTAL+G Q+T+QLVNGAL LITVGGNDFVNNYYLVP+SARSRQF LPDYV+Y+ISEYRK
Sbjct: 144 RVTALVGAQQTQQLVNGALTLITVGGNDFVNNYYLVPFSARSRQFRLPDYVRYLISEYRK 203

Query: 129 LLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLN 188
           +L RLYDLGARRVLVTGTGP+GCVPAE A R  NGQC+A+LQRAA LYNPQL Q++  LN
Sbjct: 204 ILMRLYDLGARRVLVTGTGPMGCVPAELAQRSPNGQCSAELQRAASLYNPQLTQMLGQLN 263

Query: 189 SQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAV 248
            QYG++IF+A NT +M  +F+ NP+A+GF TSK+ACCGQGPYNGLGLCTPASNLCPNR +
Sbjct: 264 DQYGADIFIAANTRQMTADFVYNPQAYGFVTSKIACCGQGPYNGLGLCTPASNLCPNRDL 323

Query: 249 YAFWDPFHPSERANGFIVQEFMTGSTEYMYPMNLSTIMALDSRT 292
           YAFWDPFHPSERANG +VQ+ + G   YM+PMNLSTI+ALDSRT
Sbjct: 324 YAFWDPFHPSERANGIVVQQILNGDATYMHPMNLSTILALDSRT 367

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255562025|ref|XP_002522021.1| zinc finger protein, putative [Ricinus communis] gi|223538825|gb|EEF40425.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255646252|gb|ACU23610.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356506016|ref|XP_003521784.1| PREDICTED: GDSL esterase/lipase At5g33370-like [Glycine max] Back     alignment and taxonomy information
>gi|255562023|ref|XP_002522020.1| zinc finger protein, putative [Ricinus communis] gi|223538824|gb|EEF40424.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356574859|ref|XP_003555561.1| PREDICTED: GDSL esterase/lipase At5g33370-like [Glycine max] Back     alignment and taxonomy information
>gi|255562027|ref|XP_002522022.1| zinc finger protein, putative [Ricinus communis] gi|223538826|gb|EEF40426.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359476529|ref|XP_002268093.2| PREDICTED: GDSL esterase/lipase At5g33370 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147788312|emb|CAN67726.1| hypothetical protein VITISV_038831 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296085157|emb|CBI28652.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query292
TAIR|locus:2145969366 AT5G33370 "AT5G33370" [Arabido 0.972 0.775 0.690 3.3e-111
TAIR|locus:2103005366 LTL1 "AT3G04290" [Arabidopsis 0.958 0.765 0.692 1e-107
TAIR|locus:2146223362 AT5G18430 "AT5G18430" [Arabido 0.952 0.767 0.667 2e-102
TAIR|locus:2117763367 AT4G28780 "AT4G28780" [Arabido 0.965 0.768 0.658 2.3e-101
TAIR|locus:2046743387 AT2G23540 "AT2G23540" [Arabido 0.952 0.718 0.356 1.4e-46
TAIR|locus:2074840374 AT3G50400 "AT3G50400" [Arabido 0.938 0.732 0.354 7.3e-43
TAIR|locus:2032333374 AT1G71250 "AT1G71250" [Arabido 0.941 0.735 0.325 1.7e-41
TAIR|locus:2143156364 GLIP7 "AT5G15720" [Arabidopsis 0.952 0.763 0.330 2.8e-41
TAIR|locus:2824531384 AT1G71691 "AT1G71691" [Arabido 0.931 0.708 0.326 1.6e-40
TAIR|locus:2013658364 AT1G29660 "AT1G29660" [Arabido 0.945 0.758 0.326 1.8e-39
TAIR|locus:2145969 AT5G33370 "AT5G33370" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1098 (391.6 bits), Expect = 3.3e-111, P = 3.3e-111
 Identities = 196/284 (69%), Positives = 242/284 (85%)

Query:     9 QHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQN 68
             +H+G E  +PYLSP L   +LL GANFASAGIGILNDTGIQF+NIIR+ +Q EYF++Y+ 
Sbjct:    83 EHLGQESPMPYLSPMLKKDKLLRGANFASAGIGILNDTGIQFLNIIRITKQLEYFEQYKV 142

Query:    69 RVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRK 128
             RV+ L+G +   +LVNGAL+LIT+GGNDFVNNYYLVP+SARSRQFSLPDYV +VISEYRK
Sbjct:   143 RVSGLVGEEEMNRLVNGALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVFVISEYRK 202

Query:   129 LLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLN 188
             +L ++YDLGARRVLVTGTGP+GCVPAE A R RNG+CA +LQRAA L+NPQL+Q++ DLN
Sbjct:   203 VLRKMYDLGARRVLVTGTGPMGCVPAELAQRSRNGECATELQRAASLFNPQLIQMITDLN 262

Query:   189 SQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAV 248
             ++ GS  F+A NT +M  +FIS+P+A+GF TSKVACCGQGPYNG+GLCTP SNLCPNR +
Sbjct:   263 NEVGSSAFIAANTQQMHMDFISDPQAYGFVTSKVACCGQGPYNGIGLCTPLSNLCPNRDL 322

Query:   249 YAFWDPFHPSERANGFIVQEFMTGSTEYMYPMNLSTIMALDSRT 292
             +AFWDPFHPSE+A+  I Q+ + GS EYM+PMNLSTI+ +DS T
Sbjct:   323 FAFWDPFHPSEKASRIIAQQILNGSPEYMHPMNLSTILTVDSMT 366
GO:0004091 "carboxylesterase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
TAIR|locus:2103005 LTL1 "AT3G04290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2146223 AT5G18430 "AT5G18430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117763 AT4G28780 "AT4G28780" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046743 AT2G23540 "AT2G23540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074840 AT3G50400 "AT3G50400" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032333 AT1G71250 "AT1G71250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143156 GLIP7 "AT5G15720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2824531 AT1G71691 "AT1G71691" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2013658 AT1G29660 "AT1G29660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8LB81GDL79_ARATH3, ., 1, ., 1, ., -0.69010.97260.7759yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.1LOW CONFIDENCE prediction!
3rd Layer3.1.1.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00190247
hypothetical protein (367 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query292
cd01837315 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase 2e-86
PLN03156351 PLN03156, PLN03156, GDSL esterase/lipase; Provisio 9e-55
cd01846270 cd01846, fatty_acyltransferase_like, Fatty acyltra 5e-21
cd01847281 cd01847, Triacylglycerol_lipase_like, Triacylglyce 4e-12
pfam00657219 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydro 1e-09
COG3240370 COG3240, COG3240, Phospholipase/lecithinase/hemoly 1e-09
>gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information 
 Score =  261 bits (668), Expect = 2e-86
 Identities = 97/268 (36%), Positives = 149/268 (55%), Gaps = 7/268 (2%)

Query: 8   GQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQ 67
            + +G     P        S  L G NFAS G GIL+ TG    ++I +  Q EYF+EY+
Sbjct: 53  AEALGLPLLPPPYLSPNGSSDFLTGVNFASGGAGILDSTG-FLGSVISLSVQLEYFKEYK 111

Query: 68  NRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYR 127
            R+ AL+G +    +++ +L LI++G ND++NNY+    +  +RQ+ +  YV +++S   
Sbjct: 112 ERLRALVGEEAAADILSKSLFLISIGSNDYLNNYF----ANPTRQYEVEAYVPFLVSNIS 167

Query: 128 KLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQ-CAADLQRAADLYNPQLVQLVKD 186
             + RLYDLGAR+ +V G GPLGC+P++R + G +G  C  +L   A L+N +L +L+ +
Sbjct: 168 SAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAE 227

Query: 187 LNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTP-ASNLCPN 245
           L  +     FV  +      + I NP  +GF  +  ACCG G   G  LC P  S +CP+
Sbjct: 228 LRRELPGAKFVYADIYNALLDLIQNPAKYGFENTLKACCGTGGPEGGLLCNPCGSTVCPD 287

Query: 246 RAVYAFWDPFHPSERANGFIVQEFMTGS 273
            + Y FWD  HP+E AN  I    ++G 
Sbjct: 288 PSKYVFWDGVHPTEAANRIIADALLSGP 315

The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315
>gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional Back     alignment and domain information
>gnl|CDD|238882 cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|238883 cd01847, Triacylglycerol_lipase_like, Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|216048 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydrolase Back     alignment and domain information
>gnl|CDD|225780 COG3240, COG3240, Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 292
PLN03156351 GDSL esterase/lipase; Provisional 100.0
cd01837315 SGNH_plant_lipase_like SGNH_plant_lipase_like, a p 100.0
cd01847281 Triacylglycerol_lipase_like Triacylglycerol lipase 100.0
PRK15381408 pathogenicity island 2 effector protein SseJ; Prov 100.0
cd01846270 fatty_acyltransferase_like Fatty acyltransferase-l 100.0
COG3240370 Phospholipase/lecithinase/hemolysin [Lipid metabol 100.0
PF00657234 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter 99.89
cd01836191 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee 99.12
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 99.05
cd01824288 Phospholipase_B_like Phospholipase-B_like. This su 99.05
cd01828169 sialate_O-acetylesterase_like2 sialate_O-acetylest 99.02
cd01833157 XynB_like SGNH_hydrolase subfamily, similar to Rum 99.01
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 98.97
cd04506204 SGNH_hydrolase_YpmR_like Members of the SGNH-hydro 98.95
cd01839208 SGNH_arylesterase_like SGNH_hydrolase subfamily, s 98.91
cd00229187 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, 98.91
cd01832185 SGNH_hydrolase_like_1 Members of the SGNH-hydrolas 98.9
cd04501183 SGNH_hydrolase_like_4 Members of the SGNH-hydrolas 98.88
cd01823259 SEST_like SEST_like. A family of secreted SGNH-hyd 98.87
cd01830204 XynE_like SGNH_hydrolase subfamily, similar to the 98.86
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 98.84
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 98.82
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 98.79
cd04502171 SGNH_hydrolase_like_7 Members of the SGNH-hydrolas 98.77
cd01820214 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A 98.75
PRK10528191 multifunctional acyl-CoA thioesterase I and protea 98.74
cd01844177 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG 98.72
cd01826305 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase l 98.7
PF13472179 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami 98.68
cd01822177 Lysophospholipase_L1_like Lysophospholipase L1-lik 98.65
cd01821198 Rhamnogalacturan_acetylesterase_like Rhamnogalactu 98.63
cd01835193 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG 98.55
cd01825189 SGNH_hydrolase_peri1 SGNH_peri1; putative periplas 98.51
cd01840150 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SG 98.38
cd01831169 Endoglucanase_E_like Endoglucanase E-like members 98.3
KOG3035245 consensus Isoamyl acetate-hydrolyzing esterase [Li 98.01
COG2755216 TesA Lysophospholipase L1 and related esterases [A 97.49
KOG3670397 consensus Phospholipase [Lipid transport and metab 97.2
PF14606178 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase fami 97.11
COG2845354 Uncharacterized protein conserved in bacteria [Fun 96.64
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 93.17
PF08885251 GSCFA: GSCFA family; InterPro: IPR014982 This grou 91.27
>PLN03156 GDSL esterase/lipase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.5e-59  Score=431.54  Aligned_cols=264  Identities=32%  Similarity=0.654  Sum_probs=228.3

Q ss_pred             HHHhhcCC-CCCCCCCCCCCCCCCCCCcceecccCCcCccCCCCCcccccCHHHHHHHHHHHHHHHHHhhChhHHHhhhc
Q 022808            6 CAGQHIGS-EPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVN   84 (292)
Q Consensus         6 ~ia~~lGl-~~~~p~~~~~~~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~   84 (292)
                      |||+.||| |++|||+++...+.++.+|+|||+|||++++.++.. ...++|..||++|+.+++++....|.++++...+
T Consensus        79 ~iA~~lGl~p~~ppyl~~~~~~~~~~~GvNFA~agag~~~~~~~~-~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~  157 (351)
T PLN03156         79 FISEAFGLKPAIPAYLDPSYNISDFATGVCFASAGTGYDNATSDV-LSVIPLWKELEYYKEYQTKLRAYLGEEKANEIIS  157 (351)
T ss_pred             hHHHHhCCCCCCCCCcCcccCchhhcccceeecCCccccCCCccc-cCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHh
Confidence            79999999 789999987555668999999999999987765421 2357899999999998887776666655566779


Q ss_pred             cceEEEeeccchhhhhhhcCccCccCccCChhHHHHHHHHHHHHHHHHHHHhcCceEEecCCCCCCcchhhhhhcC-CCC
Q 022808           85 GALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRG-RNG  163 (292)
Q Consensus        85 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~v~~L~~~Gar~~vv~~lpplg~~P~~~~~~~-~~~  163 (292)
                      ++||+||||+|||...++..+  ......+++++++.+++.+.+.|++||++|||||+|+|+||+||+|..+.... ...
T Consensus       158 ~sL~~i~iG~NDy~~~~~~~~--~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~  235 (351)
T PLN03156        158 EALYLISIGTNDFLENYYTFP--GRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGS  235 (351)
T ss_pred             cCeEEEEecchhHHHHhhccc--cccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCC
Confidence            999999999999986554221  11223357789999999999999999999999999999999999999765422 135


Q ss_pred             cchhHHhHHHHHHHHHHHHHHHHHHHhcCCCcEEEeecchhHHHHhhCCcCCCccccccccccccCCCCccccCCCC-CC
Q 022808          164 QCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPAS-NL  242 (292)
Q Consensus       164 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~~c~~~~-~~  242 (292)
                      +|.+.+|.+++.||++|++++++|++++||++|+++|+|+++.++++||++|||++++++||+.|.++....|++.. ..
T Consensus       236 ~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~~~C~~~~~~~  315 (351)
T PLN03156        236 ECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMGYLCNRNNPFT  315 (351)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCccccCCCCCCc
Confidence            79999999999999999999999999999999999999999999999999999999999999988888878899655 58


Q ss_pred             CCCCCCceeeCCCChhHHHHHHHHHHHhcC
Q 022808          243 CPNRAVYAFWDPFHPSERANGFIVQEFMTG  272 (292)
Q Consensus       243 C~~~~~y~fwD~~HPT~~~h~~iA~~~~~~  272 (292)
                      |++|++|+|||++|||+++|+++|+.++++
T Consensus       316 C~~p~~yvfWD~~HPTe~a~~~iA~~~~~~  345 (351)
T PLN03156        316 CSDADKYVFWDSFHPTEKTNQIIANHVVKT  345 (351)
T ss_pred             cCCccceEEecCCCchHHHHHHHHHHHHHH
Confidence            999999999999999999999999999986

>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional Back     alignment and domain information
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] Back     alignment and domain information
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01824 Phospholipase_B_like Phospholipase-B_like Back     alignment and domain information
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A Back     alignment and domain information
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases Back     alignment and domain information
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01823 SEST_like SEST_like Back     alignment and domain information
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases Back     alignment and domain information
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional Back     alignment and domain information
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family Back     alignment and domain information
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A Back     alignment and domain information
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans Back     alignment and domain information
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism] Back     alignment and domain information
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] Back     alignment and domain information
>KOG3670 consensus Phospholipase [Lipid transport and metabolism] Back     alignment and domain information
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query292
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 4e-55
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 Back     alignment and structure
 Score =  187 bits (476), Expect = 4e-55
 Identities = 48/283 (16%), Positives = 82/283 (28%), Gaps = 24/283 (8%)

Query: 11  IGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRV 70
           I         SP      +  G N+A  G                   + +         
Sbjct: 74  IAPGDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANG-SLIERDNTLLRSRDG 132

Query: 71  TALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLL 130
             +   ++       AL  IT GGNDF+    L    A+     L D V+          
Sbjct: 133 YLVDRARQGLGADPNALYYITGGGNDFLQGRILNDVQAQQAAGRLVDSVQ---------- 182

Query: 131 TRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQ 190
             L   GAR ++V     LG  PA        G       + +  +N +L   +    + 
Sbjct: 183 -ALQQAGARYIVVWLLPDLGLTPA-----TFGGPLQPFASQLSGTFNAELTAQLSQAGAN 236

Query: 191 YGSEIFVAVNTGKMQYNFISNPRAFGFT--TSKVACCGQGPYNGLGLCTPASNLCPNRAV 248
                 + +N   +    ++NP +FG     + +  C  G    +      +   P+ + 
Sbjct: 237 -----VIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGNGCTMNPTYGINGSTPDPSK 291

Query: 249 YAFWDPFHPSERANGFIVQEFMTGSTEYMYPMNLSTIMALDSR 291
             F D  HP+      I     +  +       L  +     R
Sbjct: 292 LLFNDSVHPTITGQRLIADYTYSLLSAPWELTLLPEMAHGTLR 334

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query292
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 100.0
3mil_A240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 99.39
2hsj_A214 Putative platelet activating factor; structr genom 99.33
3p94_A204 GDSL-like lipase; serine hydrolase, catalytic tria 99.21
1yzf_A195 Lipase/acylhydrolase; structural GENO PSI, protein 99.18
3rjt_A216 Lipolytic protein G-D-S-L family; PSI-biology, mid 99.16
1fxw_F229 Alpha2, platelet-activating factor acetylhydrolase 99.05
2q0q_A216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 99.05
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 99.04
2vpt_A215 Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos 99.04
1es9_A232 PAF-AH, platelet-activating factor acetylhydrolase 99.0
1vjg_A218 Putative lipase from the G-D-S-L family; structura 98.98
3dci_A232 Arylesterase; SGNH_hydrolase SUBF structural genom 98.89
1ivn_A190 Thioesterase I; hydrolase, protease; 1.90A {Escher 98.86
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 98.84
1esc_A306 Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. 98.83
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 98.81
3dc7_A232 Putative uncharacterized protein LP_3323; NESG LPR 98.54
3bzw_A274 Putative lipase; protein structure initiative II, 98.51
1k7c_A233 Rhamnogalacturonan acetylesterase; N-linked glycos 98.38
3skv_A385 SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr 98.37
2wao_A341 Endoglucanase E; plant cell WALL degradation, carb 98.27
2o14_A375 Hypothetical protein YXIM; NESG, X-RAY, SR595, str 98.23
2waa_A347 Acetyl esterase, xylan esterase, putative, AXE2C; 98.02
2w9x_A366 AXE2A, CJCE2B, putative acetyl xylan esterase; car 97.76
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
Probab=100.00  E-value=2.7e-50  Score=398.68  Aligned_cols=250  Identities=20%  Similarity=0.254  Sum_probs=204.9

Q ss_pred             hHHHhhcCCCC--CCCCCCCCCCCCCCCCcceecccCCcC---ccCCCCCcccccCHHHHHHHHH-HHHHHHHHhhChhH
Q 022808            5 ICAGQHIGSEP--TLPYLSPELTGSRLLVGANFASAGIGI---LNDTGIQFVNIIRMFRQFEYFQ-EYQNRVTALIGPQR   78 (292)
Q Consensus         5 ~~ia~~lGl~~--~~p~~~~~~~~~~~~~G~NfA~gGA~~---~~~~~~~~~~~~~l~~Qv~~f~-~~~~~~~~~~g~~~   78 (292)
                      =||||.||||+  ++||+++...+.++.+|+|||+|||++   ++.++.....+++|..||.+|. .++.++..     .
T Consensus        66 D~ia~~lgl~~~~l~p~~~~~~~~~~~~~G~NfA~gGa~~~~~l~~~~~~~~~~~~l~~ql~~~~~~~l~~~~~-----~  140 (632)
T 3kvn_X           66 MLLGNQLGIAPGDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVDRAR-----Q  140 (632)
T ss_dssp             HHHHHHTTCCGGGGSBSSCHHHHHHTCCCCSBCCCTTCCHHHHHHHHHSTTCEEEEETTEEEEEECCHHHHHHT-----T
T ss_pred             HHHHHHcCCCccccCccccccccccccccCceEeeccccccccccccccccccccccchhHHHHHHHHHHHHhh-----c
Confidence            38999999984  667765322256899999999999996   4443222234567777777666 44433321     1


Q ss_pred             HHhhhccceEEEeeccchhhhhhhcCccCccCccCChhHHHHHHHHHHHHHHHHHHHhcCceEEecCCCCCCcchhhhhh
Q 022808           79 TKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAM  158 (292)
Q Consensus        79 ~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~v~~L~~~Gar~~vv~~lpplg~~P~~~~~  158 (292)
                      .....+++||+||||+|||+..+..           .+++++.+++++.++|++||++|||+|+|+++||+||+|...  
T Consensus       141 ~~~~~~~sL~~v~iG~ND~~~~~~~-----------~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~~pp~gc~P~~~--  207 (632)
T 3kvn_X          141 GLGADPNALYYITGGGNDFLQGRIL-----------NDVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATF--  207 (632)
T ss_dssp             TCCCCTTSEEEECCSHHHHHTTCCC-----------SHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCCGGGSTTTT--
T ss_pred             cCccCCCCEEEEEEechhhhccccc-----------ChHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccc--
Confidence            2356799999999999999875532           135688999999999999999999999999999999999953  


Q ss_pred             cCCCCcchhHHhHHHHHHHHHHHHHHHHHHHhcCCCcEEEeecchhHHHHhhCCcCCCccccc--cccccccCCCCcccc
Q 022808          159 RGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSK--VACCGQGPYNGLGLC  236 (292)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~i~~nP~~yGf~~~~--~~Cc~~~~~~~~~~c  236 (292)
                         ..+|.+.+|++++.||.+|++++++|+     .+|+++|+|+++.++++||++|||+++.  .+||+.+.     .|
T Consensus       208 ---~~~c~~~~n~~~~~~N~~L~~~l~~l~-----~~i~~~D~y~~~~~~~~np~~yGf~~~~~~~~cCg~g~-----~C  274 (632)
T 3kvn_X          208 ---GGPLQPFASQLSGTFNAELTAQLSQAG-----ANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGN-----GC  274 (632)
T ss_dssp             ---TSTTHHHHHHHHHHHHHHHHHHHHHHC-----CCEEEECHHHHHHHHHHCGGGGTCCTTSCTTTCBSSCT-----TS
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHhCC-----CeEEEEEcHHHHHHHHhCHHhcCCCcCCCCccccCCCC-----cc
Confidence               247999999999999999999999984     4899999999999999999999999875  69999752     68


Q ss_pred             CCC-----CCCCCCCCCceeeCCCChhHHHHHHHHHHHhcCCCCccCCCChhhhhcC
Q 022808          237 TPA-----SNLCPNRAVYAFWDPFHPSERANGFIVQEFMTGSTEYMYPMNLSTIMAL  288 (292)
Q Consensus       237 ~~~-----~~~C~~~~~y~fwD~~HPT~~~h~~iA~~~~~~~~~~~~P~~~~~l~~~  288 (292)
                      ++.     ...|+||++|+|||++||||++|++||++++++   ++.|+++++|+++
T Consensus       275 ~~~~~~~~~~~C~~~~~y~fwD~~HpTe~~~~~ia~~~~~~---~~~P~~~~~l~~~  328 (632)
T 3kvn_X          275 TMNPTYGINGSTPDPSKLLFNDSVHPTITGQRLIADYTYSL---LSAPWELTLLPEM  328 (632)
T ss_dssp             CBCTTTSTTSSSCCGGGCSBSSSSCBCHHHHHHHHHHHHHH---HHTHHHHTTHHHH
T ss_pred             CCcccccccccCCCccceEEecCCCCHHHHHHHHHHHHHhc---cCCCccHHHHHHH
Confidence            753     468999999999999999999999999999996   5799999998854
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 Back     alignment and structure
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Back     alignment and structure
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 Back     alignment and structure
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A Back     alignment and structure
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} Back     alignment and structure
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* Back     alignment and structure
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A Back     alignment and structure
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Back     alignment and structure
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A Back     alignment and structure
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 Back     alignment and structure
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 Back     alignment and structure
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* Back     alignment and structure
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} Back     alignment and structure
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* Back     alignment and structure
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 Back     alignment and structure
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} Back     alignment and structure
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query292
d1esca_302 Esterase {Streptomyces scabies [TaxId: 1930]} 99.33
d2hsja1211 Uncharacterized protein SP1450 {Streptococcus pneu 99.01
d1k7ca_233 Rhamnogalacturonan acetylesterase {Fungus (Aspergi 98.86
d1fxwf_212 Platelet-activating factor acetylhydrolase {Cow (B 98.76
d1es9a_212 Platelet-activating factor acetylhydrolase {Cow (B 98.76
d1yzfa1195 Lipase/acylhydrolase {Enterococcus faecalis [TaxId 98.65
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 98.65
d1jrla_179 Thioesterase I, TAP {Escherichia coli [TaxId: 562] 98.56
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 98.53
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 98.4
d1vjga_201 Hypothetical protein alr1529 {Nostoc sp. pcc 7120 98.28
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Esterase
domain: Esterase
species: Streptomyces scabies [TaxId: 1930]

Probab=99.33  E-value=2.6e-12  Score=112.34  Aligned_cols=128  Identities=13%  Similarity=-0.027  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHHHHHHhc-CceEEecCCCCCCc---chhhhhhcC--------CCCcchhHHhHHHHHHHHHHHHHHHHHH
Q 022808          121 YVISEYRKLLTRLYDLG-ARRVLVTGTGPLGC---VPAERAMRG--------RNGQCAADLQRAADLYNPQLVQLVKDLN  188 (292)
Q Consensus       121 ~~~~~i~~~v~~L~~~G-ar~~vv~~lpplg~---~P~~~~~~~--------~~~~~~~~~~~~~~~~N~~L~~~l~~l~  188 (292)
                      .+..++.+.++++.+.. --+|++++.|++.-   .|.......        ....-...++.+...+|..+++...   
T Consensus       157 ~~~~~l~~~~~~i~~~~p~a~iv~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~i~~~A~---  233 (302)
T d1esca_         157 RVGAELEELLDRIGYFAPDAKRVLVGYPRLVPEDTTKCLTAAPGQTQLPFADIPQDALPVLDQIQKRLNDAMKKAAA---  233 (302)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCEEEEECCCCCSCSCGGGGGSCCTTCSSCTTTTCCTTTHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHHHCCCCeEEEecCcccccccCCcccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH---
Confidence            34444555555554442 33688888886421   000000000        0112344567778888888776543   


Q ss_pred             HhcCCCcEEEeecchhHHHHhhCCcCCCccccccccccccCCCCccccCCCCCCCCCCCCceeeCCCChhHHHHHHHHHH
Q 022808          189 SQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAVYAFWDPFHPSERANGFIVQE  268 (292)
Q Consensus       189 ~~~~g~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~C~~~~~y~fwD~~HPT~~~h~~iA~~  268 (292)
                          ..++.++|++..|.       .+++-...++|...          .......++..+++||.+|||++||++||+.
T Consensus       234 ----~~~v~~vd~~~~f~-------~~~~c~~~~~~~~~----------~~~~~~~~~~~~~~~d~~HPn~~G~~~iA~~  292 (302)
T d1esca_         234 ----DGGADFVDLYAGTG-------ANTACDGADRGIGG----------LLEDSQLELLGTKIPWYAHPNDKGRDIQAKQ  292 (302)
T ss_dssp             ----TTTCEEECTGGGCT-------TSSTTSTTSCSBCC----------SSSEEEEESSSCEEECSSCBCHHHHHHHHHH
T ss_pred             ----HcCCEEEechhhhc-------cccccccccccccc----------cccccccccccccccCCcCCCHHHHHHHHHH
Confidence                34577899998764       12111111121111          0111122468899999999999999999999


Q ss_pred             HhcC
Q 022808          269 FMTG  272 (292)
Q Consensus       269 ~~~~  272 (292)
                      +++.
T Consensus       293 i~~~  296 (302)
T d1esca_         293 VADK  296 (302)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9874
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} Back     information, alignment and structure
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Back     information, alignment and structure
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure