Query 022810
Match_columns 291
No_of_seqs 366 out of 3430
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 11:30:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022810.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022810hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hem_A Cyclopropane-fatty-acyl 100.0 3E-38 1E-42 275.2 30.1 268 6-288 15-302 (302)
2 1kpg_A CFA synthase;, cyclopro 100.0 2.3E-35 7.8E-40 255.1 29.5 268 6-288 7-287 (287)
3 2fk8_A Methoxy mycolic acid sy 100.0 1.3E-33 4.4E-38 247.6 26.0 269 7-290 34-315 (318)
4 3bus_A REBM, methyltransferase 100.0 1.6E-30 5.5E-35 222.9 24.6 262 6-289 4-273 (273)
5 2o57_A Putative sarcosine dime 100.0 5.9E-26 2E-30 196.9 29.1 260 8-290 20-295 (297)
6 3ujc_A Phosphoethanolamine N-m 99.9 3.1E-23 1.1E-27 176.4 20.6 220 49-289 41-266 (266)
7 3vc1_A Geranyl diphosphate 2-C 99.9 4.2E-22 1.4E-26 173.9 17.3 211 12-236 68-284 (312)
8 3kkz_A Uncharacterized protein 99.9 2.2E-20 7.5E-25 159.3 23.7 176 52-235 34-218 (267)
9 1nkv_A Hypothetical protein YJ 99.9 4.7E-20 1.6E-24 156.1 22.0 122 49-171 22-144 (256)
10 3f4k_A Putative methyltransfer 99.8 2E-19 6.8E-24 152.3 19.5 118 51-170 33-153 (257)
11 4htf_A S-adenosylmethionine-de 99.8 7.3E-21 2.5E-25 163.9 9.8 117 52-171 58-177 (285)
12 3mgg_A Methyltransferase; NYSG 99.8 6.1E-20 2.1E-24 157.2 14.2 130 42-171 16-146 (276)
13 4gek_A TRNA (CMO5U34)-methyltr 99.8 1.3E-19 4.3E-24 154.0 15.5 109 61-170 68-181 (261)
14 1vl5_A Unknown conserved prote 99.8 6E-20 2.1E-24 156.0 13.0 121 49-171 23-144 (260)
15 3g5l_A Putative S-adenosylmeth 99.8 5E-21 1.7E-25 161.9 5.8 186 52-250 33-220 (253)
16 3fpf_A Mtnas, putative unchara 99.8 8E-20 2.7E-24 156.0 12.0 155 8-168 66-223 (298)
17 1pjz_A Thiopurine S-methyltran 99.8 4.4E-19 1.5E-23 145.3 15.6 116 52-169 11-142 (203)
18 3dh0_A SAM dependent methyltra 99.8 3.7E-19 1.3E-23 147.0 14.2 120 53-172 27-148 (219)
19 3dtn_A Putative methyltransfer 99.8 1.7E-19 5.7E-24 150.7 11.0 118 53-172 33-153 (234)
20 3iv6_A Putative Zn-dependent a 99.8 3E-19 1E-23 151.0 12.5 152 52-207 34-210 (261)
21 1xxl_A YCGJ protein; structura 99.8 7.2E-19 2.5E-23 147.5 14.8 120 50-171 8-128 (239)
22 3dlc_A Putative S-adenosyl-L-m 99.8 7.1E-19 2.4E-23 144.9 14.2 117 50-168 31-149 (219)
23 2p7i_A Hypothetical protein; p 99.8 5.4E-19 1.8E-23 148.5 12.1 105 62-172 41-146 (250)
24 3jwh_A HEN1; methyltransferase 99.8 1.5E-18 5E-23 143.4 14.5 116 51-166 17-140 (217)
25 3hnr_A Probable methyltransfer 99.8 8.4E-19 2.9E-23 145.0 12.4 111 55-171 37-149 (220)
26 3jwg_A HEN1, methyltransferase 99.8 1.4E-18 4.9E-23 143.6 13.5 118 49-166 15-140 (219)
27 1dl5_A Protein-L-isoaspartate 99.8 2.3E-19 8E-24 156.9 8.9 178 50-238 62-245 (317)
28 3h2b_A SAM-dependent methyltra 99.8 2.8E-18 9.5E-23 140.1 14.4 140 9-171 3-145 (203)
29 2xvm_A Tellurite resistance pr 99.8 4.6E-18 1.6E-22 138.1 15.5 113 55-169 24-138 (199)
30 3gu3_A Methyltransferase; alph 99.8 2E-18 6.7E-23 148.6 14.0 119 50-169 8-128 (284)
31 2gb4_A Thiopurine S-methyltran 99.8 1.1E-17 3.6E-22 141.4 18.0 107 61-169 66-193 (252)
32 3ou2_A SAM-dependent methyltra 99.8 1.6E-18 5.6E-23 142.8 12.4 111 54-170 36-149 (218)
33 3e05_A Precorrin-6Y C5,15-meth 99.8 1.2E-17 4.1E-22 136.6 17.2 117 51-170 28-145 (204)
34 2p35_A Trans-aconitate 2-methy 99.8 1.9E-18 6.4E-23 146.4 12.6 117 50-171 20-136 (259)
35 1y8c_A S-adenosylmethionine-de 99.8 2.1E-18 7.3E-23 144.7 12.1 105 63-170 37-145 (246)
36 3dli_A Methyltransferase; PSI- 99.8 4.1E-18 1.4E-22 142.9 13.1 163 61-243 39-219 (240)
37 4hg2_A Methyltransferase type 99.8 1.3E-18 4.5E-23 147.3 10.1 110 51-171 29-139 (257)
38 4fsd_A Arsenic methyltransfera 99.8 2.9E-18 9.8E-23 153.8 12.6 111 61-171 81-207 (383)
39 3ofk_A Nodulation protein S; N 99.8 3.6E-18 1.2E-22 140.8 12.2 112 55-170 43-157 (216)
40 3p9n_A Possible methyltransfer 99.8 7.3E-18 2.5E-22 136.2 13.5 110 62-172 43-158 (189)
41 3bkx_A SAM-dependent methyltra 99.8 1.1E-17 3.6E-22 143.1 15.1 131 42-172 22-164 (275)
42 2ex4_A Adrenal gland protein A 99.8 2.1E-18 7.2E-23 144.8 10.5 107 63-170 79-188 (241)
43 3dxy_A TRNA (guanine-N(7)-)-me 99.8 4E-18 1.4E-22 141.0 11.9 107 63-169 34-152 (218)
44 3e23_A Uncharacterized protein 99.8 4.9E-18 1.7E-22 139.5 11.6 135 6-170 8-144 (211)
45 3ccf_A Cyclopropane-fatty-acyl 99.8 7.5E-18 2.5E-22 144.5 13.0 113 53-172 47-159 (279)
46 3g5t_A Trans-aconitate 3-methy 99.8 2.1E-17 7.1E-22 143.2 15.6 108 61-169 34-151 (299)
47 3e8s_A Putative SAM dependent 99.7 7.9E-19 2.7E-23 145.4 6.2 198 7-248 9-211 (227)
48 3hm2_A Precorrin-6Y C5,15-meth 99.7 1.6E-17 5.4E-22 132.6 13.5 115 51-170 13-130 (178)
49 1wzn_A SAM-dependent methyltra 99.7 2E-17 6.9E-22 139.5 14.8 142 13-169 3-147 (252)
50 3thr_A Glycine N-methyltransfe 99.7 9.5E-18 3.3E-22 144.8 12.9 114 55-170 49-178 (293)
51 3l8d_A Methyltransferase; stru 99.7 6.6E-18 2.3E-22 141.5 11.3 106 62-172 52-158 (242)
52 3m70_A Tellurite resistance pr 99.7 1.8E-17 6.2E-22 142.6 14.4 105 62-169 119-225 (286)
53 1zx0_A Guanidinoacetate N-meth 99.7 1E-18 3.5E-23 146.4 6.0 157 9-168 4-171 (236)
54 3i9f_A Putative type 11 methyl 99.7 1.4E-17 4.7E-22 132.1 12.0 108 55-172 9-117 (170)
55 1xtp_A LMAJ004091AAA; SGPP, st 99.7 1.4E-17 4.7E-22 140.6 12.7 121 46-169 76-199 (254)
56 1dus_A MJ0882; hypothetical pr 99.7 3.6E-17 1.2E-21 132.0 14.6 117 52-170 41-160 (194)
57 2yqz_A Hypothetical protein TT 99.7 2E-17 6.8E-22 140.3 13.7 104 60-166 36-140 (263)
58 3lcc_A Putative methyl chlorid 99.7 7.3E-18 2.5E-22 140.9 10.8 116 52-170 56-174 (235)
59 1ve3_A Hypothetical protein PH 99.7 3.7E-17 1.3E-21 135.5 14.8 120 46-170 23-145 (227)
60 1ri5_A MRNA capping enzyme; me 99.7 3.2E-17 1.1E-21 141.5 14.8 109 61-170 62-177 (298)
61 2gs9_A Hypothetical protein TT 99.7 9.8E-18 3.3E-22 137.7 10.9 107 54-171 28-136 (211)
62 3ege_A Putative methyltransfer 99.7 1.2E-17 4.3E-22 141.8 11.2 114 50-172 21-135 (261)
63 3njr_A Precorrin-6Y methylase; 99.7 8.5E-17 2.9E-21 131.7 15.7 111 53-170 45-157 (204)
64 3lbf_A Protein-L-isoaspartate 99.7 4.8E-17 1.7E-21 133.5 14.0 112 50-169 64-176 (210)
65 3d2l_A SAM-dependent methyltra 99.7 7.7E-17 2.6E-21 135.0 15.2 134 14-170 3-140 (243)
66 3mti_A RRNA methylase; SAM-dep 99.7 4.4E-17 1.5E-21 131.1 13.1 108 60-169 19-137 (185)
67 3bkw_A MLL3908 protein, S-aden 99.7 2.4E-17 8.2E-22 138.1 12.0 112 54-170 34-147 (243)
68 3g2m_A PCZA361.24; SAM-depende 99.7 1.7E-17 5.8E-22 143.8 11.4 119 51-172 71-195 (299)
69 2b3t_A Protein methyltransfera 99.7 4.9E-17 1.7E-21 139.3 14.0 118 49-167 96-238 (276)
70 3ocj_A Putative exported prote 99.7 1.4E-17 4.9E-22 144.7 10.8 113 60-172 115-232 (305)
71 2p8j_A S-adenosylmethionine-de 99.7 3.5E-17 1.2E-21 134.1 12.5 110 61-172 21-133 (209)
72 1yzh_A TRNA (guanine-N(7)-)-me 99.7 7.4E-17 2.5E-21 132.9 14.4 107 62-168 40-157 (214)
73 3sm3_A SAM-dependent methyltra 99.7 4.7E-17 1.6E-21 135.5 12.3 108 62-171 29-145 (235)
74 2aot_A HMT, histamine N-methyl 99.7 4.1E-17 1.4E-21 140.9 12.1 109 62-170 51-175 (292)
75 3pfg_A N-methyltransferase; N, 99.7 3.2E-17 1.1E-21 139.3 11.2 139 11-169 10-153 (263)
76 3fzg_A 16S rRNA methylase; met 99.7 1.2E-17 4.2E-22 132.6 7.7 112 50-165 38-150 (200)
77 1xdz_A Methyltransferase GIDB; 99.7 3.6E-17 1.2E-21 137.2 11.2 102 61-166 68-173 (240)
78 2fca_A TRNA (guanine-N(7)-)-me 99.7 7.2E-17 2.5E-21 133.0 12.7 106 63-168 38-154 (213)
79 2qe6_A Uncharacterized protein 99.7 1.6E-16 5.4E-21 136.0 15.2 151 18-170 23-199 (274)
80 3gwz_A MMCR; methyltransferase 99.7 3.9E-16 1.3E-20 139.2 18.4 118 52-171 191-311 (369)
81 3g07_A 7SK snRNA methylphospha 99.7 2.8E-17 9.7E-22 142.0 10.5 105 63-167 46-220 (292)
82 2r3s_A Uncharacterized protein 99.7 3.1E-16 1.1E-20 137.8 16.9 119 52-171 152-275 (335)
83 3evz_A Methyltransferase; NYSG 99.7 5.3E-16 1.8E-20 129.1 17.4 108 60-169 52-181 (230)
84 3i53_A O-methyltransferase; CO 99.7 1.5E-16 5.3E-21 139.8 14.5 114 55-170 161-277 (332)
85 2kw5_A SLR1183 protein; struct 99.7 1.6E-16 5.6E-21 129.5 13.3 107 62-172 29-136 (202)
86 3mq2_A 16S rRNA methyltransfer 99.7 1.2E-17 4.1E-22 138.0 6.4 111 57-168 21-141 (218)
87 3gdh_A Trimethylguanosine synt 99.7 1.6E-18 5.5E-23 145.5 1.1 103 63-167 78-181 (241)
88 3bxo_A N,N-dimethyltransferase 99.7 1.8E-16 6.2E-21 132.4 13.1 102 62-170 39-144 (239)
89 2ift_A Putative methylase HI07 99.7 7.7E-17 2.6E-21 131.6 10.2 107 63-171 53-167 (201)
90 3eey_A Putative rRNA methylase 99.7 1.5E-16 5.2E-21 129.2 11.8 110 60-169 19-141 (197)
91 3mcz_A O-methyltransferase; ad 99.7 2.4E-16 8.1E-21 139.6 14.0 117 54-171 169-291 (352)
92 1jsx_A Glucose-inhibited divis 99.7 1.7E-16 5.9E-21 129.8 12.1 101 63-167 65-165 (207)
93 2esr_A Methyltransferase; stru 99.7 1E-16 3.5E-21 127.9 10.5 121 51-173 18-144 (177)
94 4dcm_A Ribosomal RNA large sub 99.7 2.8E-16 9.5E-21 140.1 14.4 116 54-169 213-336 (375)
95 2vdw_A Vaccinia virus capping 99.7 1.4E-16 4.7E-21 138.1 12.0 109 63-172 48-174 (302)
96 1x19_A CRTF-related protein; m 99.7 5.9E-16 2E-20 137.5 16.3 119 51-171 178-299 (359)
97 3uwp_A Histone-lysine N-methyl 99.7 2.4E-16 8.1E-21 139.6 13.4 122 46-168 156-289 (438)
98 3bgv_A MRNA CAP guanine-N7 met 99.7 2.6E-16 8.8E-21 137.2 13.5 108 62-170 33-158 (313)
99 2fhp_A Methylase, putative; al 99.7 2.6E-16 8.9E-21 126.5 12.6 121 51-173 31-160 (187)
100 3g89_A Ribosomal RNA small sub 99.7 1.6E-16 5.5E-21 134.0 11.7 103 61-167 78-184 (249)
101 3lpm_A Putative methyltransfer 99.7 2.3E-16 7.8E-21 133.9 12.7 112 56-168 41-177 (259)
102 2a14_A Indolethylamine N-methy 99.7 3.8E-17 1.3E-21 139.1 7.8 107 60-168 52-198 (263)
103 2yxe_A Protein-L-isoaspartate 99.7 6.8E-16 2.3E-20 127.1 15.0 115 50-170 64-180 (215)
104 3dmg_A Probable ribosomal RNA 99.7 2.9E-16 1E-20 140.1 13.6 121 46-169 214-342 (381)
105 3orh_A Guanidinoacetate N-meth 99.7 3.5E-17 1.2E-21 137.0 7.0 114 50-166 48-169 (236)
106 1ws6_A Methyltransferase; stru 99.7 1.5E-16 5E-21 126.0 9.9 105 63-172 41-152 (171)
107 1qzz_A RDMB, aclacinomycin-10- 99.7 6.4E-16 2.2E-20 138.0 14.9 114 53-168 172-288 (374)
108 3dr5_A Putative O-methyltransf 99.7 5.1E-16 1.7E-20 128.6 13.2 121 45-168 38-164 (221)
109 2pxx_A Uncharacterized protein 99.7 7E-16 2.4E-20 126.6 13.8 107 62-171 41-163 (215)
110 3dp7_A SAM-dependent methyltra 99.7 6.3E-16 2.1E-20 137.6 14.5 108 62-170 178-290 (363)
111 4dzr_A Protein-(glutamine-N5) 99.7 2.7E-17 9.4E-22 134.9 5.3 118 49-167 15-165 (215)
112 1nt2_A Fibrillarin-like PRE-rR 99.7 6.8E-16 2.3E-20 126.9 13.6 106 59-168 53-162 (210)
113 1vbf_A 231AA long hypothetical 99.7 5E-16 1.7E-20 129.3 12.8 111 50-170 57-168 (231)
114 3r0q_C Probable protein argini 99.7 2.1E-16 7.1E-21 141.2 11.2 115 52-168 52-170 (376)
115 2fpo_A Methylase YHHF; structu 99.7 2.9E-16 9.9E-21 128.3 11.1 107 63-171 54-164 (202)
116 3mb5_A SAM-dependent methyltra 99.7 7.2E-16 2.5E-20 130.3 13.8 114 52-170 82-197 (255)
117 3ntv_A MW1564 protein; rossman 99.7 3.5E-16 1.2E-20 130.6 11.7 104 62-168 70-177 (232)
118 2yxd_A Probable cobalt-precorr 99.7 1.3E-15 4.4E-20 121.7 14.5 112 50-170 22-134 (183)
119 3htx_A HEN1; HEN1, small RNA m 99.7 5.6E-16 1.9E-20 146.8 14.1 121 50-171 708-838 (950)
120 4e2x_A TCAB9; kijanose, tetron 99.7 4.9E-17 1.7E-21 147.3 6.7 123 42-170 86-211 (416)
121 2ip2_A Probable phenazine-spec 99.7 5E-16 1.7E-20 136.6 13.0 116 52-170 157-275 (334)
122 2ozv_A Hypothetical protein AT 99.7 3.7E-16 1.3E-20 132.7 11.7 114 56-169 29-172 (260)
123 1yb2_A Hypothetical protein TA 99.7 4.2E-16 1.4E-20 133.5 12.0 112 53-169 100-213 (275)
124 2g72_A Phenylethanolamine N-me 99.7 2.3E-16 8E-21 135.9 10.5 105 62-167 70-215 (289)
125 2gpy_A O-methyltransferase; st 99.7 4.1E-16 1.4E-20 130.1 11.4 105 61-168 52-161 (233)
126 1u2z_A Histone-lysine N-methyl 99.7 5E-16 1.7E-20 139.9 12.6 117 50-167 229-359 (433)
127 3u81_A Catechol O-methyltransf 99.7 3.1E-16 1.1E-20 129.8 10.3 107 62-169 57-172 (221)
128 3tma_A Methyltransferase; thum 99.7 1.2E-15 4.2E-20 135.2 14.8 121 50-170 190-320 (354)
129 3ggd_A SAM-dependent methyltra 99.7 3.6E-16 1.2E-20 131.3 10.8 106 61-171 54-167 (245)
130 3giw_A Protein of unknown func 99.7 8.7E-16 3E-20 129.7 12.8 153 18-171 24-204 (277)
131 3ckk_A TRNA (guanine-N(7)-)-me 99.7 5.8E-16 2E-20 129.5 11.5 108 61-168 44-169 (235)
132 1o9g_A RRNA methyltransferase; 99.7 5.3E-16 1.8E-20 130.9 11.1 118 49-166 37-213 (250)
133 1fbn_A MJ fibrillarin homologu 99.7 6.9E-16 2.4E-20 128.6 11.7 104 56-166 67-177 (230)
134 2y1w_A Histone-arginine methyl 99.7 1.1E-15 3.6E-20 135.3 13.4 116 52-169 39-157 (348)
135 1nv8_A HEMK protein; class I a 99.7 6.5E-16 2.2E-20 132.8 11.6 116 51-168 111-250 (284)
136 1tw3_A COMT, carminomycin 4-O- 99.6 1.9E-15 6.4E-20 134.3 14.8 115 53-169 173-290 (360)
137 2pjd_A Ribosomal RNA small sub 99.6 5.9E-16 2E-20 136.7 11.4 115 53-169 186-305 (343)
138 2pwy_A TRNA (adenine-N(1)-)-me 99.6 1.8E-15 6.1E-20 127.9 13.8 113 53-170 86-201 (258)
139 3grz_A L11 mtase, ribosomal pr 99.6 5.4E-16 1.8E-20 126.8 10.2 105 61-170 58-162 (205)
140 1jg1_A PIMT;, protein-L-isoasp 99.6 1.7E-15 5.8E-20 126.6 13.5 115 50-171 78-193 (235)
141 2avn_A Ubiquinone/menaquinone 99.6 1.2E-15 4E-20 129.5 12.5 100 63-170 54-155 (260)
142 1l3i_A Precorrin-6Y methyltran 99.6 1.7E-15 5.8E-20 121.8 12.8 114 51-169 21-136 (192)
143 2fyt_A Protein arginine N-meth 99.6 1.8E-15 6.3E-20 133.3 13.9 110 53-164 54-168 (340)
144 2i62_A Nicotinamide N-methyltr 99.6 5.3E-16 1.8E-20 131.6 9.6 108 60-168 53-199 (265)
145 3cgg_A SAM-dependent methyltra 99.6 2.3E-15 7.9E-20 121.4 12.9 102 61-169 44-149 (195)
146 3r3h_A O-methyltransferase, SA 99.6 5.5E-16 1.9E-20 130.2 9.2 117 49-171 49-174 (242)
147 3duw_A OMT, O-methyltransferas 99.6 1.2E-15 4E-20 126.4 11.1 104 62-168 57-168 (223)
148 2h00_A Methyltransferase 10 do 99.6 1.9E-16 6.5E-21 133.9 6.4 148 17-165 18-190 (254)
149 3tfw_A Putative O-methyltransf 99.6 1.5E-15 5.1E-20 128.0 11.8 106 62-170 62-173 (248)
150 4a6d_A Hydroxyindole O-methylt 99.6 8.3E-16 2.9E-20 136.2 10.5 116 53-170 169-286 (353)
151 4df3_A Fibrillarin-like rRNA/T 99.6 1.1E-15 3.8E-20 126.6 10.4 107 57-167 71-182 (233)
152 3a27_A TYW2, uncharacterized p 99.6 2.2E-15 7.4E-20 128.8 12.5 107 60-170 116-222 (272)
153 3q7e_A Protein arginine N-meth 99.6 1.7E-15 5.7E-20 134.1 12.1 104 61-166 64-172 (349)
154 3p2e_A 16S rRNA methylase; met 99.6 2.6E-16 9E-21 130.7 6.6 106 62-167 23-139 (225)
155 1vlm_A SAM-dependent methyltra 99.6 6.9E-16 2.4E-20 127.5 9.0 94 64-170 48-142 (219)
156 3cc8_A Putative methyltransfer 99.6 2E-15 6.7E-20 125.1 11.7 108 54-171 24-134 (230)
157 1i9g_A Hypothetical protein RV 99.6 4.1E-15 1.4E-19 127.4 13.4 115 51-170 87-206 (280)
158 3ajd_A Putative methyltransfer 99.6 2.5E-15 8.7E-20 128.5 11.9 114 57-170 77-214 (274)
159 2frn_A Hypothetical protein PH 99.6 1.6E-15 5.4E-20 130.1 10.6 105 61-170 123-228 (278)
160 3lst_A CALO1 methyltransferase 99.6 1.5E-15 5.2E-20 134.3 10.8 115 52-171 173-290 (348)
161 3tr6_A O-methyltransferase; ce 99.6 1.3E-15 4.6E-20 126.2 9.8 105 62-169 63-176 (225)
162 2pbf_A Protein-L-isoaspartate 99.6 7.2E-15 2.5E-19 121.9 14.0 110 54-169 69-195 (227)
163 2ipx_A RRNA 2'-O-methyltransfe 99.6 3.4E-15 1.2E-19 124.5 11.7 108 57-168 71-183 (233)
164 3b3j_A Histone-arginine methyl 99.6 2.4E-15 8.2E-20 138.1 11.6 114 52-167 147-263 (480)
165 2vdv_E TRNA (guanine-N(7)-)-me 99.6 6E-15 2.1E-19 124.1 13.1 106 62-167 48-173 (246)
166 1o54_A SAM-dependent O-methylt 99.6 6E-15 2.1E-19 126.3 13.3 112 53-169 102-215 (277)
167 2igt_A SAM dependent methyltra 99.6 3.5E-15 1.2E-19 130.8 11.9 107 62-170 152-275 (332)
168 1i1n_A Protein-L-isoaspartate 99.6 1.6E-14 5.5E-19 119.8 14.9 110 54-169 66-184 (226)
169 1sui_A Caffeoyl-COA O-methyltr 99.6 4.9E-15 1.7E-19 124.7 11.6 114 49-168 68-191 (247)
170 1fp1_D Isoliquiritigenin 2'-O- 99.6 7.3E-15 2.5E-19 131.1 12.7 110 52-170 197-309 (372)
171 2nxc_A L11 mtase, ribosomal pr 99.6 7.9E-15 2.7E-19 124.0 12.3 103 61-169 118-220 (254)
172 3bzb_A Uncharacterized protein 99.6 1.6E-14 5.6E-19 123.9 14.4 118 49-167 65-205 (281)
173 1ixk_A Methyltransferase; open 99.6 8.8E-15 3E-19 127.6 12.7 114 56-169 111-248 (315)
174 1g8a_A Fibrillarin-like PRE-rR 99.6 1.1E-14 3.6E-19 121.0 12.3 106 56-166 66-177 (227)
175 2yvl_A TRMI protein, hypotheti 99.6 2.6E-14 8.8E-19 120.1 14.7 111 53-170 81-193 (248)
176 4hc4_A Protein arginine N-meth 99.6 7.1E-15 2.4E-19 130.3 11.5 102 62-165 82-187 (376)
177 1g6q_1 HnRNP arginine N-methyl 99.6 1.1E-14 3.9E-19 127.6 12.8 106 58-165 33-143 (328)
178 1r18_A Protein-L-isoaspartate( 99.6 1.1E-14 3.7E-19 121.0 12.1 112 52-169 71-196 (227)
179 3c3p_A Methyltransferase; NP_9 99.6 5.1E-15 1.8E-19 121.5 9.7 102 63-168 56-161 (210)
180 1af7_A Chemotaxis receptor met 99.6 5.3E-15 1.8E-19 126.0 10.1 104 63-166 105-251 (274)
181 3reo_A (ISO)eugenol O-methyltr 99.6 1.4E-14 4.8E-19 129.0 12.8 111 52-171 191-304 (368)
182 3q87_B N6 adenine specific DNA 99.6 5.7E-15 1.9E-19 117.3 9.2 96 62-170 22-126 (170)
183 2hnk_A SAM-dependent O-methylt 99.6 8.9E-15 3E-19 122.5 10.6 105 61-168 58-182 (239)
184 4azs_A Methyltransferase WBDD; 99.6 8.9E-15 3.1E-19 137.4 11.5 107 62-170 65-176 (569)
185 1ej0_A FTSJ; methyltransferase 99.6 1.2E-14 4E-19 115.3 10.6 107 53-170 11-139 (180)
186 3c3y_A Pfomt, O-methyltransfer 99.6 1.7E-14 5.9E-19 120.7 11.6 114 49-168 59-182 (237)
187 3p9c_A Caffeic acid O-methyltr 99.6 2.6E-14 9E-19 127.1 13.2 111 52-171 189-302 (364)
188 3adn_A Spermidine synthase; am 99.6 1.4E-14 4.6E-19 124.9 10.4 109 62-170 82-201 (294)
189 3cbg_A O-methyltransferase; cy 99.6 1.3E-14 4.5E-19 121.0 9.8 104 63-169 72-184 (232)
190 1p91_A Ribosomal RNA large sub 99.6 2.4E-14 8.3E-19 121.8 11.6 98 62-171 84-182 (269)
191 2avd_A Catechol-O-methyltransf 99.6 1.5E-14 5.3E-19 120.0 10.1 104 62-168 68-180 (229)
192 2b25_A Hypothetical protein; s 99.6 2.7E-14 9.3E-19 125.6 12.1 113 52-169 94-221 (336)
193 1fp2_A Isoflavone O-methyltran 99.5 1.5E-14 5.1E-19 128.1 10.4 102 60-170 185-291 (352)
194 3kr9_A SAM-dependent methyltra 99.5 2.9E-14 9.9E-19 117.5 11.3 105 62-168 14-120 (225)
195 3id6_C Fibrillarin-like rRNA/T 99.5 9.9E-14 3.4E-18 115.1 14.6 105 59-168 72-182 (232)
196 2plw_A Ribosomal RNA methyltra 99.5 3.3E-14 1.1E-18 115.6 11.3 105 54-169 12-156 (201)
197 3m33_A Uncharacterized protein 99.5 1.3E-14 4.5E-19 120.4 9.1 90 62-164 47-139 (226)
198 3lec_A NADB-rossmann superfami 99.5 3.9E-14 1.3E-18 116.9 11.4 105 62-168 20-126 (230)
199 3gjy_A Spermidine synthase; AP 99.5 3.1E-14 1E-18 123.1 10.9 107 64-170 90-203 (317)
200 3bwc_A Spermidine synthase; SA 99.5 3.5E-14 1.2E-18 123.1 11.3 110 60-169 92-212 (304)
201 3gnl_A Uncharacterized protein 99.5 4.8E-14 1.6E-18 117.3 11.3 105 62-168 20-126 (244)
202 2qm3_A Predicted methyltransfe 99.5 3.5E-13 1.2E-17 120.2 17.1 106 61-168 170-279 (373)
203 3k6r_A Putative transferase PH 99.5 4.2E-14 1.5E-18 120.3 10.3 105 61-170 123-228 (278)
204 1zq9_A Probable dimethyladenos 99.5 5.9E-14 2E-18 120.6 10.5 113 49-164 14-144 (285)
205 2yxl_A PH0851 protein, 450AA l 99.5 1.7E-13 5.7E-18 125.2 14.0 115 56-170 252-392 (450)
206 2bm8_A Cephalosporin hydroxyla 99.5 4.3E-14 1.5E-18 118.2 8.3 98 63-168 81-188 (236)
207 3sso_A Methyltransferase; macr 99.5 5.6E-14 1.9E-18 124.1 9.4 108 51-169 205-326 (419)
208 2f8l_A Hypothetical protein LM 99.5 1.9E-13 6.4E-18 120.6 12.8 110 60-170 127-259 (344)
209 1wxx_A TT1595, hypothetical pr 99.5 9.6E-14 3.3E-18 124.2 10.9 106 63-170 209-328 (382)
210 1xj5_A Spermidine synthase 1; 99.5 1.5E-13 5.1E-18 120.4 11.8 109 59-167 116-235 (334)
211 2b78_A Hypothetical protein SM 99.5 1.3E-13 4.5E-18 123.3 11.5 108 62-170 211-334 (385)
212 1zg3_A Isoflavanone 4'-O-methy 99.5 8.2E-14 2.8E-18 123.6 10.0 107 55-170 183-296 (358)
213 2zfu_A Nucleomethylin, cerebra 99.5 1.9E-14 6.4E-19 118.4 5.4 88 61-169 65-153 (215)
214 3tm4_A TRNA (guanine N2-)-meth 99.5 1.9E-13 6.4E-18 121.9 12.2 114 52-168 207-330 (373)
215 4dmg_A Putative uncharacterize 99.5 9.1E-14 3.1E-18 124.4 10.1 106 62-170 213-329 (393)
216 3m6w_A RRNA methylase; rRNA me 99.5 1.4E-13 4.7E-18 125.2 11.3 113 57-170 95-232 (464)
217 2i7c_A Spermidine synthase; tr 99.5 1.2E-13 4E-18 118.7 10.0 111 59-169 74-194 (283)
218 1uir_A Polyamine aminopropyltr 99.5 1E-13 3.5E-18 120.8 9.5 109 61-169 75-197 (314)
219 2h1r_A Dimethyladenosine trans 99.5 2.1E-13 7.1E-18 118.0 11.4 91 50-143 29-119 (299)
220 3c0k_A UPF0064 protein YCCW; P 99.5 2.7E-13 9.2E-18 121.9 12.5 107 62-169 219-341 (396)
221 2frx_A Hypothetical protein YE 99.5 2.5E-13 8.4E-18 124.5 12.4 113 58-170 110-249 (479)
222 3m4x_A NOL1/NOP2/SUN family pr 99.5 1.3E-13 4.4E-18 125.2 10.3 114 57-170 99-237 (456)
223 3lcv_B Sisomicin-gentamicin re 99.5 1E-13 3.5E-18 115.1 8.8 102 62-165 131-234 (281)
224 2o07_A Spermidine synthase; st 99.5 8.9E-14 3.1E-18 120.5 8.8 110 60-169 92-211 (304)
225 1iy9_A Spermidine synthase; ro 99.5 9.7E-14 3.3E-18 118.6 8.7 108 62-169 74-191 (275)
226 2as0_A Hypothetical protein PH 99.5 1.7E-13 6E-18 123.1 10.4 108 62-170 216-338 (396)
227 1inl_A Spermidine synthase; be 99.5 1.1E-13 3.9E-18 119.4 8.7 108 62-169 89-207 (296)
228 1sqg_A SUN protein, FMU protei 99.5 4.2E-13 1.4E-17 121.8 12.5 115 55-170 238-377 (429)
229 1wy7_A Hypothetical protein PH 99.5 2.2E-12 7.4E-17 105.3 15.2 101 59-165 45-147 (207)
230 2pt6_A Spermidine synthase; tr 99.4 1.1E-13 3.8E-18 120.8 7.7 108 62-169 115-232 (321)
231 1mjf_A Spermidine synthase; sp 99.4 2E-13 6.7E-18 117.1 9.0 107 61-169 73-195 (281)
232 1ne2_A Hypothetical protein TA 99.4 6.9E-13 2.4E-17 107.8 11.8 90 60-157 48-139 (200)
233 1uwv_A 23S rRNA (uracil-5-)-me 99.4 1.3E-12 4.5E-17 118.7 14.8 116 46-167 269-389 (433)
234 2b2c_A Spermidine synthase; be 99.4 9.3E-14 3.2E-18 120.7 6.8 106 62-167 107-222 (314)
235 2nyu_A Putative ribosomal RNA 99.4 7.3E-13 2.5E-17 107.1 11.6 99 61-170 20-148 (196)
236 3ldu_A Putative methylase; str 99.4 9.2E-13 3.2E-17 117.7 13.3 122 49-170 181-347 (385)
237 2jjq_A Uncharacterized RNA met 99.4 1.8E-12 6.2E-17 117.2 15.2 109 49-167 279-387 (425)
238 3k0b_A Predicted N6-adenine-sp 99.4 1.2E-12 4E-17 117.2 13.8 122 49-170 187-353 (393)
239 3v97_A Ribosomal RNA large sub 99.4 2.9E-13 9.9E-18 129.6 10.0 106 63-169 539-659 (703)
240 2yx1_A Hypothetical protein MJ 99.4 4.8E-13 1.6E-17 117.6 10.6 101 62-171 194-295 (336)
241 3ldg_A Putative uncharacterize 99.4 1.7E-12 5.9E-17 115.7 14.2 122 49-170 180-346 (384)
242 2okc_A Type I restriction enzy 99.4 5.8E-13 2E-17 121.5 10.6 120 50-169 158-309 (445)
243 3frh_A 16S rRNA methylase; met 99.4 1.1E-12 3.7E-17 108.0 11.0 100 62-165 104-204 (253)
244 3dou_A Ribosomal RNA large sub 99.4 1.6E-12 5.4E-17 105.0 11.8 106 52-170 13-142 (191)
245 2cmg_A Spermidine synthase; tr 99.4 5.3E-13 1.8E-17 113.1 9.2 100 61-169 70-173 (262)
246 2wa2_A Non-structural protein 99.4 1.3E-13 4.6E-18 117.6 4.6 113 51-169 70-195 (276)
247 3hp7_A Hemolysin, putative; st 99.4 4.3E-13 1.5E-17 114.6 7.1 107 51-166 72-184 (291)
248 2ld4_A Anamorsin; methyltransf 99.4 1.8E-13 6.1E-18 109.0 4.4 91 58-168 7-102 (176)
249 2oxt_A Nucleoside-2'-O-methylt 99.4 2E-13 6.7E-18 115.9 4.8 108 52-169 63-187 (265)
250 2ih2_A Modification methylase 99.4 1.3E-12 4.4E-17 118.3 10.2 112 50-170 26-167 (421)
251 3gru_A Dimethyladenosine trans 99.4 1.2E-11 4.1E-16 106.2 14.5 90 49-142 36-126 (295)
252 3opn_A Putative hemolysin; str 99.4 1E-13 3.5E-18 115.5 1.3 108 51-167 24-137 (232)
253 3bt7_A TRNA (uracil-5-)-methyl 99.4 2.6E-12 8.9E-17 114.4 10.2 116 46-170 197-329 (369)
254 2p41_A Type II methyltransfera 99.3 5.4E-13 1.8E-17 115.5 4.4 112 53-170 72-194 (305)
255 2dul_A N(2),N(2)-dimethylguano 99.3 6.8E-12 2.3E-16 111.6 11.2 101 63-167 47-164 (378)
256 2xyq_A Putative 2'-O-methyl tr 99.3 1.2E-11 4.1E-16 105.9 12.2 97 59-170 59-174 (290)
257 3axs_A Probable N(2),N(2)-dime 99.3 5.7E-12 2E-16 112.2 9.6 102 62-167 51-158 (392)
258 2b9e_A NOL1/NOP2/SUN domain fa 99.3 4.2E-11 1.4E-15 103.7 14.3 113 57-170 96-237 (309)
259 1qam_A ERMC' methyltransferase 99.3 1.8E-11 6.2E-16 102.7 11.0 88 49-141 16-105 (244)
260 1yub_A Ermam, rRNA methyltrans 99.3 2.4E-13 8.1E-18 114.3 -1.3 112 51-167 17-145 (245)
261 3fut_A Dimethyladenosine trans 99.3 3.4E-11 1.2E-15 102.2 11.3 89 49-143 33-123 (271)
262 1m6y_A S-adenosyl-methyltransf 99.2 2E-11 6.9E-16 105.2 8.7 89 51-140 14-108 (301)
263 2ar0_A M.ecoki, type I restric 99.2 1.6E-11 5.4E-16 114.3 8.3 120 51-170 157-315 (541)
264 3tqs_A Ribosomal RNA small sub 99.2 3.9E-11 1.4E-15 101.0 9.8 88 49-141 15-107 (255)
265 2qfm_A Spermine synthase; sper 99.2 3.2E-11 1.1E-15 105.5 8.6 108 62-170 187-317 (364)
266 3v97_A Ribosomal RNA large sub 99.2 2E-10 6.9E-15 110.0 13.1 122 49-170 176-350 (703)
267 4gqb_A Protein arginine N-meth 99.1 2.9E-10 9.8E-15 106.6 12.7 129 35-164 325-464 (637)
268 2r6z_A UPF0341 protein in RSP 99.1 6.6E-11 2.3E-15 99.9 7.5 82 59-142 79-173 (258)
269 3khk_A Type I restriction-modi 99.1 2.2E-10 7.5E-15 106.5 10.2 147 15-170 202-398 (544)
270 3uzu_A Ribosomal RNA small sub 99.1 3.1E-10 1.1E-14 96.8 9.5 88 49-140 28-124 (279)
271 3lkd_A Type I restriction-modi 99.1 7.6E-10 2.6E-14 102.7 12.7 110 61-170 219-361 (542)
272 2oyr_A UPF0341 protein YHIQ; a 99.1 1.3E-10 4.4E-15 97.8 5.4 104 53-159 76-192 (258)
273 3ftd_A Dimethyladenosine trans 99.1 1.1E-09 3.9E-14 91.8 11.2 88 49-141 17-106 (249)
274 3ll7_A Putative methyltransfer 99.0 3.3E-10 1.1E-14 101.2 7.7 77 63-141 93-174 (410)
275 3o4f_A Spermidine synthase; am 99.0 2E-09 6.8E-14 91.7 11.2 110 61-170 81-201 (294)
276 3cvo_A Methyltransferase-like 99.0 3.4E-09 1.1E-13 85.6 11.8 97 63-167 30-154 (202)
277 3ua3_A Protein arginine N-meth 99.0 9.9E-10 3.4E-14 102.9 9.5 100 64-164 410-531 (745)
278 1qyr_A KSGA, high level kasuga 99.0 4.9E-10 1.7E-14 94.2 5.4 86 50-141 8-101 (252)
279 3s1s_A Restriction endonucleas 98.9 8.4E-09 2.9E-13 98.1 12.1 109 62-170 320-468 (878)
280 3b5i_A S-adenosyl-L-methionine 98.9 1.6E-08 5.3E-13 89.4 11.5 125 48-172 32-230 (374)
281 3evf_A RNA-directed RNA polyme 98.8 2.4E-09 8.2E-14 89.5 4.2 118 50-169 61-186 (277)
282 4fzv_A Putative methyltransfer 98.8 2E-08 6.7E-13 88.4 10.2 114 57-170 142-287 (359)
283 3ufb_A Type I restriction-modi 98.7 6.9E-08 2.3E-12 89.6 12.4 146 16-170 176-365 (530)
284 2k4m_A TR8_protein, UPF0146 pr 98.7 1.3E-07 4.5E-12 71.2 10.2 114 32-172 10-126 (153)
285 3gcz_A Polyprotein; flavivirus 98.6 1E-08 3.5E-13 85.9 2.7 118 50-169 77-203 (282)
286 2wk1_A NOVP; transferase, O-me 98.6 2.1E-07 7.1E-12 79.1 10.7 118 49-168 91-245 (282)
287 2qy6_A UPF0209 protein YFCK; s 98.6 6.4E-08 2.2E-12 81.4 6.9 104 62-165 59-211 (257)
288 2efj_A 3,7-dimethylxanthine me 98.6 8.2E-08 2.8E-12 84.9 7.0 107 64-173 53-231 (384)
289 1wg8_A Predicted S-adenosylmet 98.6 9.3E-08 3.2E-12 80.5 6.9 84 51-140 10-99 (285)
290 3c6k_A Spermine synthase; sper 98.5 2.8E-07 9.7E-12 80.9 8.8 106 62-168 204-332 (381)
291 1m6e_X S-adenosyl-L-methionnin 98.4 9.8E-08 3.3E-12 83.7 3.2 111 63-173 51-215 (359)
292 4auk_A Ribosomal RNA large sub 98.4 1.7E-06 5.8E-11 75.7 9.8 86 61-159 209-295 (375)
293 3lkz_A Non-structural protein 98.3 4.3E-06 1.5E-10 70.2 9.7 118 50-170 81-207 (321)
294 3eld_A Methyltransferase; flav 98.2 1.1E-05 3.8E-10 68.0 11.5 116 51-169 69-193 (300)
295 2zig_A TTHA0409, putative modi 98.2 5E-06 1.7E-10 71.4 9.6 59 50-111 223-281 (297)
296 3p8z_A Mtase, non-structural p 98.2 2.9E-06 1E-10 68.9 7.2 119 50-171 65-190 (267)
297 2px2_A Genome polyprotein [con 98.1 2E-06 6.8E-11 70.9 3.6 117 50-169 60-185 (269)
298 3tka_A Ribosomal RNA small sub 98.0 8.7E-06 3E-10 70.1 6.0 88 50-141 44-139 (347)
299 2oo3_A Protein involved in cat 97.8 4.6E-06 1.6E-10 70.2 1.8 103 63-169 91-200 (283)
300 1i4w_A Mitochondrial replicati 97.8 5E-05 1.7E-09 66.4 8.3 74 49-125 38-117 (353)
301 3r24_A NSP16, 2'-O-methyl tran 97.8 9.1E-05 3.1E-09 62.2 9.3 99 60-172 106-222 (344)
302 1g60_A Adenine-specific methyl 97.8 5.2E-05 1.8E-09 63.7 7.7 59 50-111 200-258 (260)
303 2vz8_A Fatty acid synthase; tr 97.5 2.5E-05 8.7E-10 84.2 2.6 104 62-168 1239-1349(2512)
304 1rjd_A PPM1P, carboxy methyl t 97.3 0.0055 1.9E-07 53.2 14.3 105 62-168 96-233 (334)
305 2py6_A Methyltransferase FKBM; 97.1 0.0022 7.6E-08 57.3 9.2 64 61-124 224-293 (409)
306 3tos_A CALS11; methyltransfera 97.0 0.0052 1.8E-07 51.1 10.0 114 54-170 61-220 (257)
307 3two_A Mannitol dehydrogenase; 96.9 0.003 1E-07 55.1 8.3 95 56-166 169-264 (348)
308 1boo_A Protein (N-4 cytosine-s 96.8 0.00023 7.8E-09 61.7 0.7 72 50-125 240-311 (323)
309 2uyo_A Hypothetical protein ML 96.8 0.017 5.9E-07 49.5 12.4 104 64-170 103-221 (310)
310 3g7u_A Cytosine-specific methy 96.8 0.0073 2.5E-07 53.3 10.2 72 65-143 3-84 (376)
311 1f8f_A Benzyl alcohol dehydrog 96.8 0.0068 2.3E-07 53.3 9.9 99 55-166 182-288 (371)
312 2dph_A Formaldehyde dismutase; 96.8 0.006 2E-07 54.3 9.6 102 57-166 179-298 (398)
313 1kol_A Formaldehyde dehydrogen 96.8 0.011 3.8E-07 52.4 11.3 102 57-166 179-299 (398)
314 2c7p_A Modification methylase 96.8 0.0036 1.2E-07 54.2 7.7 71 64-143 11-84 (327)
315 1pl8_A Human sorbitol dehydrog 96.8 0.0057 1.9E-07 53.5 9.1 97 57-166 165-272 (356)
316 3s2e_A Zinc-containing alcohol 96.7 0.013 4.3E-07 50.9 10.8 98 56-166 159-262 (340)
317 1g55_A DNA cytosine methyltran 96.6 0.0024 8.1E-08 55.8 5.6 72 64-142 2-80 (343)
318 3m6i_A L-arabinitol 4-dehydrog 96.5 0.01 3.4E-07 52.0 9.1 101 56-167 172-283 (363)
319 4ej6_A Putative zinc-binding d 96.5 0.024 8.3E-07 49.8 11.5 97 57-166 176-283 (370)
320 1e3j_A NADP(H)-dependent ketos 96.5 0.016 5.5E-07 50.5 10.1 97 57-166 162-270 (352)
321 1eg2_A Modification methylase 96.4 0.0057 2E-07 52.7 6.8 60 49-111 229-291 (319)
322 1uuf_A YAHK, zinc-type alcohol 96.4 0.0073 2.5E-07 53.2 7.5 98 56-166 187-287 (369)
323 4a2c_A Galactitol-1-phosphate 96.2 0.024 8.2E-07 49.1 9.8 100 55-166 152-259 (346)
324 3ubt_Y Modification methylase 96.2 0.022 7.6E-07 49.1 9.6 71 65-143 1-74 (331)
325 3vyw_A MNMC2; tRNA wobble urid 96.2 0.015 5.1E-07 49.6 8.0 129 36-165 67-224 (308)
326 3fpc_A NADP-dependent alcohol 96.2 0.012 4.1E-07 51.3 7.7 99 56-167 159-266 (352)
327 1pqw_A Polyketide synthase; ro 96.2 0.021 7.3E-07 45.2 8.6 94 57-166 32-136 (198)
328 1cdo_A Alcohol dehydrogenase; 96.2 0.015 5.2E-07 51.1 8.2 95 57-166 186-293 (374)
329 3jv7_A ADH-A; dehydrogenase, n 96.1 0.013 4.5E-07 50.8 7.5 95 60-167 168-270 (345)
330 1p0f_A NADP-dependent alcohol 96.1 0.014 4.7E-07 51.3 7.6 98 56-166 184-292 (373)
331 3goh_A Alcohol dehydrogenase, 96.1 0.021 7.1E-07 48.9 8.5 92 57-166 136-228 (315)
332 1e3i_A Alcohol dehydrogenase, 96.1 0.018 6.2E-07 50.6 8.2 98 56-166 188-296 (376)
333 1v3u_A Leukotriene B4 12- hydr 96.1 0.031 1.1E-06 48.2 9.5 94 57-166 139-243 (333)
334 2fzw_A Alcohol dehydrogenase c 96.0 0.017 5.9E-07 50.7 7.6 97 57-166 184-291 (373)
335 2jhf_A Alcohol dehydrogenase E 95.9 0.021 7.2E-07 50.2 8.0 97 57-166 185-292 (374)
336 1rjw_A ADH-HT, alcohol dehydro 95.9 0.063 2.1E-06 46.4 10.9 95 57-166 158-260 (339)
337 2h6e_A ADH-4, D-arabinose 1-de 95.9 0.023 7.8E-07 49.3 8.1 94 60-166 168-268 (344)
338 2qrv_A DNA (cytosine-5)-methyl 95.9 0.027 9.1E-07 47.9 8.1 72 62-140 14-93 (295)
339 3fbg_A Putative arginate lyase 95.9 0.022 7.5E-07 49.5 7.7 96 56-165 137-246 (346)
340 4dvj_A Putative zinc-dependent 95.9 0.016 5.6E-07 50.8 6.9 97 57-166 160-269 (363)
341 2hcy_A Alcohol dehydrogenase 1 95.8 0.031 1E-06 48.6 8.3 96 56-166 162-268 (347)
342 3uko_A Alcohol dehydrogenase c 95.8 0.016 5.4E-07 51.1 6.5 100 55-167 185-295 (378)
343 3gms_A Putative NADPH:quinone 95.7 0.028 9.6E-07 48.7 7.9 99 55-167 136-243 (340)
344 1zkd_A DUF185; NESG, RPR58, st 95.7 0.085 2.9E-06 46.5 10.9 82 57-143 74-162 (387)
345 3uog_A Alcohol dehydrogenase; 95.7 0.036 1.2E-06 48.5 8.6 97 57-167 183-287 (363)
346 2j3h_A NADP-dependent oxidored 95.7 0.045 1.6E-06 47.4 9.0 98 57-166 149-254 (345)
347 4b7c_A Probable oxidoreductase 95.6 0.015 5.1E-07 50.3 5.5 101 53-166 139-247 (336)
348 1jvb_A NAD(H)-dependent alcoho 95.5 0.051 1.8E-06 47.1 8.8 98 57-166 164-270 (347)
349 4eye_A Probable oxidoreductase 95.5 0.02 6.7E-07 49.8 5.9 96 57-167 153-257 (342)
350 3qv2_A 5-cytosine DNA methyltr 95.5 0.029 9.9E-07 48.5 6.8 75 63-143 9-89 (327)
351 4eez_A Alcohol dehydrogenase 1 95.5 0.026 8.8E-07 49.0 6.6 101 56-166 156-262 (348)
352 1vj0_A Alcohol dehydrogenase, 95.5 0.052 1.8E-06 47.8 8.6 97 57-166 188-297 (380)
353 2c0c_A Zinc binding alcohol de 95.3 0.12 4.3E-06 45.0 10.5 96 57-166 157-260 (362)
354 2b5w_A Glucose dehydrogenase; 95.2 0.043 1.5E-06 47.9 7.2 94 57-166 160-272 (357)
355 4h0n_A DNMT2; SAH binding, tra 95.2 0.036 1.2E-06 48.0 6.5 73 65-142 4-81 (333)
356 3qwb_A Probable quinone oxidor 95.1 0.096 3.3E-06 45.1 9.2 95 59-167 144-247 (334)
357 2zig_A TTHA0409, putative modi 95.1 0.011 3.6E-07 50.5 3.0 56 113-168 20-98 (297)
358 2d8a_A PH0655, probable L-thre 95.0 0.077 2.6E-06 46.0 8.2 96 57-166 162-266 (348)
359 4dup_A Quinone oxidoreductase; 94.9 0.13 4.3E-06 44.8 9.3 96 57-166 161-264 (353)
360 3nx4_A Putative oxidoreductase 94.9 0.095 3.2E-06 44.9 8.3 97 57-166 139-240 (324)
361 1piw_A Hypothetical zinc-type 94.8 0.052 1.8E-06 47.4 6.6 99 57-166 173-275 (360)
362 1qor_A Quinone oxidoreductase; 94.8 0.12 4.2E-06 44.2 8.8 93 58-166 135-238 (327)
363 3jyn_A Quinone oxidoreductase; 94.8 0.1 3.4E-06 44.8 8.2 97 57-167 134-239 (325)
364 3ip1_A Alcohol dehydrogenase, 94.7 0.26 8.8E-06 43.7 11.1 96 60-167 210-318 (404)
365 1yb5_A Quinone oxidoreductase; 94.7 0.22 7.7E-06 43.2 10.3 94 57-166 164-268 (351)
366 1wly_A CAAR, 2-haloacrylate re 94.6 0.2 6.8E-06 43.0 9.8 93 58-166 140-243 (333)
367 2eih_A Alcohol dehydrogenase; 94.5 0.2 6.9E-06 43.2 9.6 92 59-166 162-264 (343)
368 2cf5_A Atccad5, CAD, cinnamyl 94.4 0.043 1.5E-06 47.9 5.1 100 56-166 172-274 (357)
369 2j8z_A Quinone oxidoreductase; 94.4 0.21 7.2E-06 43.4 9.6 96 57-166 156-260 (354)
370 3fwz_A Inner membrane protein 94.4 0.21 7.2E-06 37.0 8.3 91 64-166 7-104 (140)
371 1yqd_A Sinapyl alcohol dehydro 94.4 0.065 2.2E-06 46.9 6.2 99 56-166 179-281 (366)
372 3gaz_A Alcohol dehydrogenase s 94.4 0.17 5.8E-06 43.7 8.8 93 57-166 144-245 (343)
373 2dq4_A L-threonine 3-dehydroge 94.2 0.011 3.6E-07 51.5 0.7 94 58-166 160-261 (343)
374 2cdc_A Glucose dehydrogenase g 94.2 0.1 3.5E-06 45.6 7.0 86 64-166 181-277 (366)
375 3iht_A S-adenosyl-L-methionine 94.1 0.16 5.5E-06 38.4 6.8 113 47-167 25-147 (174)
376 1iz0_A Quinone oxidoreductase; 94.1 0.14 4.8E-06 43.4 7.5 91 61-166 123-217 (302)
377 4fs3_A Enoyl-[acyl-carrier-pro 94.0 0.77 2.6E-05 37.8 11.7 75 63-139 5-95 (256)
378 3pvc_A TRNA 5-methylaminomethy 93.9 0.056 1.9E-06 51.6 5.2 103 63-165 58-209 (689)
379 3oig_A Enoyl-[acyl-carrier-pro 93.8 0.97 3.3E-05 37.1 12.1 103 63-167 6-147 (266)
380 2zb4_A Prostaglandin reductase 93.8 0.28 9.6E-06 42.5 9.1 97 55-166 150-259 (357)
381 3tqh_A Quinone oxidoreductase; 93.7 0.44 1.5E-05 40.6 10.0 94 57-165 146-243 (321)
382 1xa0_A Putative NADPH dependen 93.5 0.051 1.7E-06 46.7 3.8 96 58-166 143-245 (328)
383 3krt_A Crotonyl COA reductase; 93.4 0.18 6.3E-06 45.4 7.5 94 59-166 224-343 (456)
384 1boo_A Protein (N-4 cytosine-s 93.4 0.062 2.1E-06 46.3 4.0 56 114-169 14-86 (323)
385 3me5_A Cytosine-specific methy 93.4 0.077 2.6E-06 48.3 4.8 76 64-143 88-182 (482)
386 4f3n_A Uncharacterized ACR, CO 93.3 0.35 1.2E-05 43.1 8.8 46 64-109 138-188 (432)
387 4dcm_A Ribosomal RNA large sub 93.3 0.5 1.7E-05 41.5 9.8 99 63-169 38-138 (375)
388 1pjc_A Protein (L-alanine dehy 93.2 0.097 3.3E-06 45.8 5.1 99 63-166 166-266 (361)
389 2vhw_A Alanine dehydrogenase; 93.1 0.095 3.2E-06 46.2 4.8 99 63-166 167-267 (377)
390 2eez_A Alanine dehydrogenase; 93.1 0.12 4.1E-06 45.3 5.5 99 63-166 165-265 (369)
391 3grk_A Enoyl-(acyl-carrier-pro 93.0 1.6 5.5E-05 36.6 12.3 101 63-167 30-169 (293)
392 3o26_A Salutaridine reductase; 93.0 0.89 3.1E-05 38.1 10.8 77 63-140 11-101 (311)
393 3pxx_A Carveol dehydrogenase; 93.0 1.3 4.3E-05 36.8 11.6 101 63-166 9-152 (287)
394 1tt7_A YHFP; alcohol dehydroge 93.0 0.18 6.3E-06 43.2 6.5 96 58-166 144-246 (330)
395 3o38_A Short chain dehydrogena 92.9 1.2 4E-05 36.7 11.1 76 63-140 21-111 (266)
396 3tjr_A Short chain dehydrogena 92.8 0.95 3.2E-05 38.2 10.7 75 63-140 30-118 (301)
397 3ps9_A TRNA 5-methylaminomethy 92.8 0.15 5E-06 48.6 6.0 103 63-165 66-217 (676)
398 1zsy_A Mitochondrial 2-enoyl t 92.8 0.55 1.9E-05 40.7 9.3 98 58-166 162-269 (357)
399 3p2y_A Alanine dehydrogenase/p 92.4 0.088 3E-06 46.3 3.6 95 63-165 183-300 (381)
400 3llv_A Exopolyphosphatase-rela 92.0 1.1 3.6E-05 32.9 8.9 67 64-139 6-79 (141)
401 3ijr_A Oxidoreductase, short c 91.9 1.9 6.6E-05 36.0 11.5 101 63-166 46-181 (291)
402 3k31_A Enoyl-(acyl-carrier-pro 91.9 2 6.7E-05 36.1 11.5 101 63-167 29-168 (296)
403 2vn8_A Reticulon-4-interacting 91.8 0.23 8E-06 43.4 5.7 93 61-166 181-279 (375)
404 1wma_A Carbonyl reductase [NAD 91.8 0.9 3.1E-05 37.2 9.1 102 63-166 3-137 (276)
405 3gqv_A Enoyl reductase; medium 91.8 1.9 6.4E-05 37.6 11.5 91 62-166 163-262 (371)
406 4eso_A Putative oxidoreductase 91.7 1.1 3.8E-05 36.7 9.5 99 63-167 7-138 (255)
407 3is3_A 17BETA-hydroxysteroid d 91.6 2.1 7.3E-05 35.2 11.2 103 63-168 17-153 (270)
408 4a0s_A Octenoyl-COA reductase/ 91.5 1 3.6E-05 40.2 9.8 95 59-166 216-335 (447)
409 1gu7_A Enoyl-[acyl-carrier-pro 91.4 0.54 1.8E-05 40.8 7.6 98 59-166 162-274 (364)
410 4g81_D Putative hexonate dehyd 91.4 1.7 5.8E-05 35.9 10.2 75 63-140 8-96 (255)
411 1lss_A TRK system potassium up 91.3 2.8 9.6E-05 30.2 10.6 90 64-165 4-100 (140)
412 3r3s_A Oxidoreductase; structu 91.3 2.1 7.4E-05 35.8 11.1 102 63-167 48-185 (294)
413 4dio_A NAD(P) transhydrogenase 91.3 0.14 4.9E-06 45.3 3.7 42 63-105 189-231 (405)
414 3v2g_A 3-oxoacyl-[acyl-carrier 91.3 2.7 9.2E-05 34.7 11.5 102 63-167 30-165 (271)
415 3l9w_A Glutathione-regulated p 91.2 0.58 2E-05 41.7 7.6 94 64-168 4-103 (413)
416 3lf2_A Short chain oxidoreduct 90.9 4.2 0.00014 33.3 12.4 76 63-140 7-97 (265)
417 3ioy_A Short-chain dehydrogena 90.9 2.5 8.5E-05 35.9 11.2 76 63-140 7-97 (319)
418 1l7d_A Nicotinamide nucleotide 90.8 0.21 7.3E-06 44.0 4.4 41 63-104 171-212 (384)
419 3ce6_A Adenosylhomocysteinase; 90.8 0.99 3.4E-05 41.1 8.8 89 61-166 271-360 (494)
420 3edm_A Short chain dehydrogena 90.7 1.2 4E-05 36.6 8.7 101 63-166 7-142 (259)
421 4da9_A Short-chain dehydrogena 90.5 2.5 8.6E-05 35.1 10.6 75 63-140 28-117 (280)
422 3u5t_A 3-oxoacyl-[acyl-carrier 90.5 2.8 9.7E-05 34.5 10.9 102 63-167 26-161 (267)
423 3ius_A Uncharacterized conserv 90.4 3.4 0.00012 34.0 11.5 81 65-155 6-90 (286)
424 3ggo_A Prephenate dehydrogenas 90.3 2.2 7.4E-05 36.3 10.2 88 64-164 33-125 (314)
425 2g1u_A Hypothetical protein TM 90.2 0.75 2.6E-05 34.5 6.5 94 62-165 17-116 (155)
426 1x13_A NAD(P) transhydrogenase 90.0 0.2 6.7E-06 44.5 3.5 40 63-103 171-211 (401)
427 1y1p_A ARII, aldehyde reductas 89.9 5.8 0.0002 33.3 12.8 79 62-141 9-94 (342)
428 1ja9_A 4HNR, 1,3,6,8-tetrahydr 89.9 1.4 4.8E-05 36.1 8.6 76 63-140 20-109 (274)
429 1xg5_A ARPG836; short chain de 89.8 4.3 0.00015 33.4 11.6 77 63-140 31-121 (279)
430 4egf_A L-xylulose reductase; s 89.4 2.8 9.7E-05 34.4 10.1 75 63-140 19-108 (266)
431 1id1_A Putative potassium chan 89.3 2.4 8.2E-05 31.5 8.8 94 64-166 3-104 (153)
432 1g60_A Adenine-specific methyl 89.3 0.14 4.8E-06 42.5 1.8 53 115-167 5-74 (260)
433 3sx2_A Putative 3-ketoacyl-(ac 89.1 2.5 8.5E-05 34.9 9.5 76 63-141 12-113 (278)
434 4fn4_A Short chain dehydrogena 89.0 2.1 7E-05 35.3 8.8 74 63-139 6-93 (254)
435 4fgs_A Probable dehydrogenase 88.9 3.8 0.00013 34.1 10.4 98 63-166 28-158 (273)
436 3swr_A DNA (cytosine-5)-methyl 88.8 0.86 3E-05 45.1 7.2 73 63-142 539-630 (1002)
437 3ksu_A 3-oxoacyl-acyl carrier 88.4 2.7 9.2E-05 34.5 9.2 102 63-166 10-146 (262)
438 3ek2_A Enoyl-(acyl-carrier-pro 88.0 3.9 0.00013 33.4 9.9 102 62-167 12-153 (271)
439 3t4x_A Oxidoreductase, short c 87.7 5.1 0.00017 32.8 10.5 76 63-140 9-95 (267)
440 1ae1_A Tropinone reductase-I; 87.4 2.9 0.0001 34.4 8.9 76 63-140 20-109 (273)
441 3d4o_A Dipicolinate synthase s 87.4 2.5 8.5E-05 35.5 8.5 88 62-165 153-242 (293)
442 1g0o_A Trihydroxynaphthalene r 87.4 6.1 0.00021 32.6 10.9 103 63-167 28-163 (283)
443 1eg2_A Modification methylase 87.4 0.29 9.9E-06 42.0 2.6 57 114-170 38-109 (319)
444 4a27_A Synaptic vesicle membra 87.3 0.43 1.5E-05 41.3 3.7 95 57-167 136-238 (349)
445 3gvc_A Oxidoreductase, probabl 87.3 6.4 0.00022 32.5 10.9 72 63-140 28-113 (277)
446 3h2s_A Putative NADH-flavin re 87.3 4.6 0.00016 31.7 9.8 94 65-166 1-103 (224)
447 2gdz_A NAD+-dependent 15-hydro 87.2 6.5 0.00022 32.0 10.9 78 63-141 6-97 (267)
448 3l4b_C TRKA K+ channel protien 87.2 2.6 8.9E-05 33.5 8.2 89 66-165 2-97 (218)
449 3c85_A Putative glutathione-re 87.2 3.1 0.00011 31.9 8.4 91 64-166 39-138 (183)
450 2hwk_A Helicase NSP2; rossman 87.2 1.1 3.8E-05 37.4 5.8 53 119-171 195-258 (320)
451 3ic5_A Putative saccharopine d 87.2 3.4 0.00012 28.6 8.0 68 64-140 5-79 (118)
452 4ft4_B DNA (cytosine-5)-methyl 87.0 2.9 0.0001 40.3 9.7 45 63-107 211-260 (784)
453 2ae2_A Protein (tropinone redu 86.9 3 0.0001 34.0 8.6 76 63-140 8-97 (260)
454 1h2b_A Alcohol dehydrogenase; 86.7 1.7 5.7E-05 37.7 7.2 94 59-166 182-284 (359)
455 2ew2_A 2-dehydropantoate 2-red 86.5 9.4 0.00032 31.7 11.8 91 65-165 4-106 (316)
456 3ucx_A Short chain dehydrogena 86.5 3.8 0.00013 33.6 9.0 74 63-139 10-97 (264)
457 3e8x_A Putative NAD-dependent 86.4 5 0.00017 32.0 9.5 71 63-141 20-95 (236)
458 3iei_A Leucine carboxyl methyl 86.2 15 0.00052 31.4 15.1 104 63-168 90-230 (334)
459 3c24_A Putative oxidoreductase 86.1 4.9 0.00017 33.3 9.7 84 65-164 12-98 (286)
460 3h7a_A Short chain dehydrogena 86.1 2.4 8.3E-05 34.5 7.6 75 63-140 6-93 (252)
461 2rir_A Dipicolinate synthase, 85.9 3.5 0.00012 34.7 8.6 88 62-165 155-244 (300)
462 2x9g_A PTR1, pteridine reducta 85.9 6.4 0.00022 32.6 10.3 75 63-140 22-116 (288)
463 3qiv_A Short-chain dehydrogena 85.8 3.6 0.00012 33.3 8.5 75 63-140 8-96 (253)
464 3l77_A Short-chain alcohol deh 85.7 5.4 0.00019 31.7 9.5 75 64-140 2-90 (235)
465 3pi7_A NADH oxidoreductase; gr 85.6 1.6 5.6E-05 37.5 6.5 91 62-166 162-262 (349)
466 3nbm_A PTS system, lactose-spe 85.5 3.1 0.00011 29.3 6.8 77 63-165 5-82 (108)
467 3ew7_A LMO0794 protein; Q8Y8U8 85.5 6.5 0.00022 30.6 9.7 67 65-140 1-71 (221)
468 3gaf_A 7-alpha-hydroxysteroid 85.4 4 0.00014 33.2 8.6 75 63-140 11-99 (256)
469 2f1k_A Prephenate dehydrogenas 85.2 5.7 0.0002 32.7 9.6 84 66-163 2-87 (279)
470 4e6p_A Probable sorbitol dehyd 85.2 5.5 0.00019 32.4 9.4 72 63-140 7-92 (259)
471 4e21_A 6-phosphogluconate dehy 85.1 2.5 8.7E-05 36.7 7.5 88 64-164 22-112 (358)
472 1zcj_A Peroxisomal bifunctiona 84.9 12 0.0004 33.6 12.1 95 64-165 37-148 (463)
473 3sc4_A Short chain dehydrogena 84.7 5.6 0.00019 33.0 9.3 75 63-140 8-103 (285)
474 4g65_A TRK system potassium up 84.7 1.4 4.7E-05 39.8 5.8 66 64-137 3-75 (461)
475 3hwr_A 2-dehydropantoate 2-red 84.4 5.5 0.00019 33.7 9.3 91 63-166 18-119 (318)
476 3lyl_A 3-oxoacyl-(acyl-carrier 84.2 4.2 0.00014 32.7 8.2 75 63-140 4-92 (247)
477 3rkr_A Short chain oxidoreduct 84.2 3.7 0.00013 33.5 7.9 76 63-140 28-116 (262)
478 2a4k_A 3-oxoacyl-[acyl carrier 84.0 9.1 0.00031 31.2 10.2 73 63-140 5-90 (263)
479 3abi_A Putative uncharacterize 84.0 1.7 5.8E-05 37.8 5.9 66 63-138 15-85 (365)
480 1bg6_A N-(1-D-carboxylethyl)-L 84.0 6.3 0.00021 33.7 9.6 91 65-165 5-107 (359)
481 1fmc_A 7 alpha-hydroxysteroid 83.9 3 0.0001 33.7 7.1 76 63-140 10-98 (255)
482 3sju_A Keto reductase; short-c 83.7 4.3 0.00015 33.5 8.2 75 63-140 23-111 (279)
483 3pk0_A Short-chain dehydrogena 83.6 4 0.00014 33.4 7.8 77 63-140 9-98 (262)
484 1xq1_A Putative tropinone redu 83.4 4.6 0.00016 32.9 8.1 76 63-140 13-102 (266)
485 3icc_A Putative 3-oxoacyl-(acy 83.2 5.3 0.00018 32.2 8.4 102 63-167 6-147 (255)
486 3tfo_A Putative 3-oxoacyl-(acy 83.1 4.3 0.00015 33.4 7.8 74 64-140 4-91 (264)
487 3awd_A GOX2181, putative polyo 83.0 6.1 0.00021 31.9 8.7 76 63-140 12-100 (260)
488 1xu9_A Corticosteroid 11-beta- 82.9 4.6 0.00016 33.4 8.0 74 63-137 27-113 (286)
489 3d1l_A Putative NADP oxidoredu 82.9 6.8 0.00023 32.0 9.0 88 64-165 10-100 (266)
490 3b1f_A Putative prephenate deh 82.8 13 0.00044 30.7 10.8 89 65-164 7-98 (290)
491 1yb1_A 17-beta-hydroxysteroid 82.7 6.2 0.00021 32.3 8.7 76 63-140 30-118 (272)
492 3r1i_A Short-chain type dehydr 82.5 4.3 0.00015 33.5 7.7 75 63-140 31-119 (276)
493 3nyw_A Putative oxidoreductase 82.3 7.5 0.00026 31.4 9.0 76 63-140 6-97 (250)
494 1e7w_A Pteridine reductase; di 82.2 7 0.00024 32.4 9.0 62 63-126 8-73 (291)
495 3k6j_A Protein F01G10.3, confi 82.1 23 0.00079 31.7 12.6 97 64-167 54-166 (460)
496 2jah_A Clavulanic acid dehydro 82.0 7.3 0.00025 31.4 8.8 75 63-140 6-94 (247)
497 2i6t_A Ubiquitin-conjugating e 82.0 11 0.00039 31.7 10.1 98 63-166 13-124 (303)
498 4e12_A Diketoreductase; oxidor 82.0 8 0.00027 32.1 9.2 94 65-164 5-118 (283)
499 1qsg_A Enoyl-[acyl-carrier-pro 81.9 11 0.00037 30.7 9.9 76 63-140 8-97 (265)
500 2vz8_A Fatty acid synthase; tr 81.9 2.9 0.0001 45.8 7.8 102 57-166 1661-1769(2512)
No 1
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=100.00 E-value=3e-38 Score=275.21 Aligned_cols=268 Identities=25% Similarity=0.410 Sum_probs=229.6
Q ss_pred cchhHHHhhcCCChHHHHHhhCCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC
Q 022810 6 QTDKAKEQHYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY 85 (291)
Q Consensus 6 ~~~~~~~~~yd~~~~~y~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~ 85 (291)
.....+++|||..+++|..++++.+.|++++|.....++.+++.++++.+++.+.+.++.+|||||||+|.++..+++.+
T Consensus 15 ~~~~~i~~~Yd~~~~~y~~~l~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~ 94 (302)
T 3hem_A 15 PPVEAVRSHYDKSNEFFKLWLDPSMTYSCAYFERPDMTLEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEY 94 (302)
T ss_dssp CCHHHHHHHHTSCHHHHHHHSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH
T ss_pred chHHHHHHhcCCCHHHHHHhcCCCCceeeEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhC
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCCccEEEEccccccccc---------HHHHHHHHHh
Q 022810 86 SNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEMFEHMKN---------YQNLLKKISK 155 (291)
Q Consensus 86 p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~---------~~~~l~~~~~ 155 (291)
+.+|+|+|+|+.+++.+++++...+++ +++++.+|+.++ .++||+|++..+++|+++ ...+++++.+
T Consensus 95 -~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~ 171 (302)
T 3hem_A 95 -DVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYN 171 (302)
T ss_dssp -CCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHH
T ss_pred -CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHH
Confidence 489999999999999999999998885 799999999887 589999999999999954 4799999999
Q ss_pred ccccCeeEEEEeeccCCcccccccC--------CccchhhhhccCCCCCCcHHHHHHhh--cCcEEEEeeecCCCcHHHH
Q 022810 156 WMKEDTLLFVHHFCHKTFAYHFEDT--------NDDDWITKYFFTGGTMPSANLLLYFQ--DDVSVVDHWLVNGKHYAQT 225 (291)
Q Consensus 156 ~L~pgG~l~i~~~~~~~~~~~~~~~--------~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~t 225 (291)
+|||||++++.++............ ....|+.++++|++.+++...+.... .++.+++. ...+.+|.+|
T Consensus 172 ~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~~-~~~~~~y~~t 250 (302)
T 3hem_A 172 LTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNAGWKVERY-HRIGANYVPT 250 (302)
T ss_dssp SSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEEE-EECGGGHHHH
T ss_pred hcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHHHHHHHhCCcEEEEE-EeCchhHHHH
Confidence 9999999999988765432111000 01278999999999888876655543 36766654 4557889999
Q ss_pred HHHHHHHHHhcHHhHhhhHHhccCcchhHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEee
Q 022810 226 SEEWLKRMDNNLASIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVTHFLFRK 288 (291)
Q Consensus 226 ~~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 288 (291)
++.|.+++.++..++... ++ ..+++.|+.|+.+|+.+|+.|. +++.|++++|
T Consensus 251 l~~w~~~~~~~~~~~~~~----~~----~~~~~~w~~yl~~~~~~f~~~~---~~~~q~~~~~ 302 (302)
T 3hem_A 251 LNAWADALQAHKDEAIAL----KG----QETCDIYMHYLRGCSDLFRDKY---TDVCQFTLVK 302 (302)
T ss_dssp HHHHHHHHHHTHHHHHHH----HC----HHHHHHHHHHHHHHHHHHHTTS---SEEEEEEEEC
T ss_pred HHHHHHHHHHhHHHHHHH----hC----HHHHHHHHHHHHHHHHHHhCCC---CeEEEEEEEC
Confidence 999999999998887655 45 3688999999999999999988 5699999987
No 2
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=100.00 E-value=2.3e-35 Score=255.08 Aligned_cols=268 Identities=25% Similarity=0.435 Sum_probs=225.8
Q ss_pred cchhHHHhhcCCChHHHHHhhCCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC
Q 022810 6 QTDKAKEQHYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY 85 (291)
Q Consensus 6 ~~~~~~~~~yd~~~~~y~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~ 85 (291)
.....+++|||..++||+.++++.+.|++++|.....++.+++.++++.+++.+.+.++.+|||||||+|.++..+++..
T Consensus 7 ~~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~ 86 (287)
T 1kpg_A 7 PHFANVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDMTLQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY 86 (287)
T ss_dssp CCHHHHHHHHTSCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH
T ss_pred ccHHHHHHhcCCCHHHHHHhcCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHc
Confidence 45678999999999999999999999999999988899999999999999999988899999999999999999999665
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCCccEEEEccccccc--ccHHHHHHHHHhccccCee
Q 022810 86 SNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTL 162 (291)
Q Consensus 86 p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~ 162 (291)
+.+|+|+|+|+.+++.+++++...++ ++++++.+|+.+++ ++||+|++..+++|+ ++...+++++.++|||||.
T Consensus 87 -~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 163 (287)
T 1kpg_A 87 -DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGV 163 (287)
T ss_dssp -CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC--CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCE
T ss_pred -CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC--CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCE
Confidence 67999999999999999999988776 47999999998765 789999999999999 6889999999999999999
Q ss_pred EEEEeeccCCccccc--------ccCCccchhhhhccCCCCCCcHHHHHHh--hcCcEEEEeeecCCCcHHHHHHHHHHH
Q 022810 163 LFVHHFCHKTFAYHF--------EDTNDDDWITKYFFTGGTMPSANLLLYF--QDDVSVVDHWLVNGKHYAQTSEEWLKR 232 (291)
Q Consensus 163 l~i~~~~~~~~~~~~--------~~~~~~~w~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~t~~~w~~~ 232 (291)
+++.++......... .......|+.++++|++.+++...+... ..++.+++. ...+.+|.+|+..|..+
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~-~~~~~~y~~~~~~w~~~ 242 (287)
T 1kpg_A 164 MLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRV-QSLQPHYAKTLDLWSAA 242 (287)
T ss_dssp EEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEE-EECHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEEE-EeCcHhHHHHHHHHHHH
Confidence 999888765422100 0012345677888999988877666554 246766654 44457899999999999
Q ss_pred HHhcHHhHhhhHHhccCcchhHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEee
Q 022810 233 MDNNLASIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVTHFLFRK 288 (291)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 288 (291)
+.++..++... ++ ..+++.|+.|+.+|+++|+.|. +++.||+++|
T Consensus 243 ~~~~~~~~~~~----~~----~~~~~~~~~~l~~~~~~f~~g~---~~~~~~~~~k 287 (287)
T 1kpg_A 243 LQANKGQAIAL----QS----EEVYERYMKYLTGCAEMFRIGY---IDVNQFTCQK 287 (287)
T ss_dssp HHHTHHHHHHH----SC----HHHHHHHHHHHHHHHHHHHTTS---EEEEEEEEEC
T ss_pred HHHHHHHHHHh----cC----hHHHHHHHHHHHHHHHHHhCCC---CeEEEEEEEC
Confidence 99887776543 44 3678999999999999999977 7899999987
No 3
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=100.00 E-value=1.3e-33 Score=247.63 Aligned_cols=269 Identities=23% Similarity=0.379 Sum_probs=221.6
Q ss_pred chhHHHhhcCCChHHHHHhhCCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC
Q 022810 7 TDKAKEQHYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS 86 (291)
Q Consensus 7 ~~~~~~~~yd~~~~~y~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p 86 (291)
....+++|||..+++|+.++++.+.|++++|.....++.+++..+++.+++.+.+.++.+|||||||+|.++..+++.+
T Consensus 34 ~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~- 112 (318)
T 2fk8_A 34 RFEDIQAHYDVSDDFFALFQDPTRTYSCAYFEPPELTLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF- 112 (318)
T ss_dssp ----CGGGGCCCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH-
T ss_pred hHHHHHHhcCCCHHHHHHHcCCCCCcceeeeCCCCCCHHHHHHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC-
Confidence 3457789999999999999999999999999988899999999999999999998899999999999999999999886
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCCccEEEEccccccc--ccHHHHHHHHHhccccCeeE
Q 022810 87 NCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLL 163 (291)
Q Consensus 87 ~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l 163 (291)
+.+|+|+|+|+.+++.++++....++ ++++++.+|+.+++ ++||+|++..+++|+ ++...+++++.++|||||++
T Consensus 113 ~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l 190 (318)
T 2fk8_A 113 DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRM 190 (318)
T ss_dssp CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEE
Confidence 67999999999999999999988877 36999999998874 789999999999999 78899999999999999999
Q ss_pred EEEeeccCCcccccc--------cCCccchhhhhccCCCCCCcHHHHHHhh--cCcEEEEeeecCCCcHHHHHHHHHHHH
Q 022810 164 FVHHFCHKTFAYHFE--------DTNDDDWITKYFFTGGTMPSANLLLYFQ--DDVSVVDHWLVNGKHYAQTSEEWLKRM 233 (291)
Q Consensus 164 ~i~~~~~~~~~~~~~--------~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~t~~~w~~~l 233 (291)
++.++.......... ......|+.++++|++.+++...+.... .++.+++ +...+.+|.+++..|..++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~-~~~~~~~y~~~~~~w~~~~ 269 (318)
T 2fk8_A 191 TVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPE-PLSLRPHYIKTLRIWGDTL 269 (318)
T ss_dssp EEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTTCBCCC-CEECHHHHHHHHHHHHHHH
T ss_pred EEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCCCEEEE-EEecchhHHHHHHHHHHHH
Confidence 999887654321000 0012367777888888888766655432 3565544 3334568999999999999
Q ss_pred HhcHHhHhhhHHhccCcchhHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEeecC
Q 022810 234 DNNLASIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVTHFLFRKKM 290 (291)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 290 (291)
.++..++... ++ ..+++.|+.|+..|.++|+.|.. ++.|++++||.
T Consensus 270 ~~~~~~~~~~----~~----~~~~~~~~~~l~~~~~~f~~g~~---~~~~~~~~k~~ 315 (318)
T 2fk8_A 270 QSNKDKAIEV----TS----EEVYNRYMKYLRGCEHYFTDEML---DCSLVTYLKPG 315 (318)
T ss_dssp HHTHHHHHHH----SC----HHHHHHHHHHHHHHHHHHHTTSC---EEEEEEEECTT
T ss_pred HHHHHHHHHh----cC----hHHHHHHHHHHHHHHHHHHCCCC---eEEEEEEEeCC
Confidence 9887766543 33 36789999999999999999884 69999999983
No 4
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.98 E-value=1.6e-30 Score=222.88 Aligned_cols=262 Identities=18% Similarity=0.231 Sum_probs=185.6
Q ss_pred cchhHHHhhcCCChHHHHHhhCCCCCccccccCCCC--CCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHH
Q 022810 6 QTDKAKEQHYELPTSFFKLVLGKYFKYSCCYFSDAS--KTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQ 83 (291)
Q Consensus 6 ~~~~~~~~~yd~~~~~y~~~~~~~~~y~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~ 83 (291)
++...+++|||..+++|+.++++.+++ ++|.... .++.+++..+.+.+++.+.+.++.+|||||||+|.++..+++
T Consensus 4 p~~~~~~~~Yd~~~~~y~~~~~~~~~~--~y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~ 81 (273)
T 3bus_A 4 PTPEEVRQMYDDFTDPFARIWGENLHF--GYWEDAGADVSVDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLAT 81 (273)
T ss_dssp -------------------CCGGGCCC--CCCCCSSCCCCHHHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHH
T ss_pred CcHHHHHHHHcchHHHHHHHcCCCceE--EecCCCccccCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHH
Confidence 677889999999999999999987766 8998765 689999999999999999999999999999999999999998
Q ss_pred HCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC-CCccEEEEcccccccccHHHHHHHHHhccccCe
Q 022810 84 KYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDT 161 (291)
Q Consensus 84 ~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG 161 (291)
.. +.+|+|+|+|+.+++.+++++...++ +++.++.+|+.+++.+ ++||+|++..+++|+++...+++++.++|||||
T Consensus 82 ~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG 160 (273)
T 3bus_A 82 AR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGG 160 (273)
T ss_dssp HS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEE
T ss_pred hc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCe
Confidence 76 78999999999999999999988887 4799999999988766 789999999999999999999999999999999
Q ss_pred eEEEEeeccCCcccccccCCccchhhh--hccCCCCCCcHHHHHH-h-hcCcEEEEeeecCCCcHHHHHHHHHHHHHhcH
Q 022810 162 LLFVHHFCHKTFAYHFEDTNDDDWITK--YFFTGGTMPSANLLLY-F-QDDVSVVDHWLVNGKHYAQTSEEWLKRMDNNL 237 (291)
Q Consensus 162 ~l~i~~~~~~~~~~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~t~~~w~~~l~~~~ 237 (291)
++++.++......... ...+... ..++....++...+.. + ..++.+++. ...+.+|.+++..|.+++.+..
T Consensus 161 ~l~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 235 (273)
T 3bus_A 161 TVAIADFVLLAPVEGA----KKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTST-VDISAQARPSLVKTAEAFENAR 235 (273)
T ss_dssp EEEEEEEEESSCCCHH----HHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEE-EECHHHHTTHHHHHHHHHHHTH
T ss_pred EEEEEEeeccCCCChh----HHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEE-EECcHhHHHHHHHHHHHHHHhH
Confidence 9999887654322111 0111111 1234445555444443 3 346766553 3345567788999999998765
Q ss_pred HhHhhhHHhccCcchhHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEeec
Q 022810 238 ASIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVTHFLFRKK 289 (291)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 289 (291)
..+. ..+|++..+.+...|+.+ +..+. ++.+++++|||
T Consensus 236 ~~~~----~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~~~~kp 273 (273)
T 3bus_A 236 SQVE----PFMGAEGLDRMIATFRGL-------AEVPE---AGYVLIGARKP 273 (273)
T ss_dssp HHHH----HHHCHHHHHHHHHHHHHH-------HTCTT---EEEEEEEEECC
T ss_pred HHHH----hhcCHHHHHHHHHHHHHH-------hhCCC---eeEEEEEEECC
Confidence 4443 345654444555555432 44433 89999999998
No 5
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.95 E-value=5.9e-26 Score=196.90 Aligned_cols=260 Identities=17% Similarity=0.201 Sum_probs=192.4
Q ss_pred hhHHHhhcCCC--hHHHHHhh-CCCCCccccccCCC--CCCHHHHHHHHHHHHHHHc----CCCCCCEEEEEcCCcchHH
Q 022810 8 DKAKEQHYELP--TSFFKLVL-GKYFKYSCCYFSDA--SKTLEDAEKAMLELYCERS----RLEDGHTVLDVGCGWGSLS 78 (291)
Q Consensus 8 ~~~~~~~yd~~--~~~y~~~~-~~~~~y~~~~~~~~--~~~l~~~~~~~~~~~~~~~----~~~~~~~vLDiGcG~G~~~ 78 (291)
...+.+|||.. .+||+.++ ++.+++ ++|... ...+.+++.+.++.+++.+ .+.++.+|||||||+|..+
T Consensus 20 ~~~~~~~Yd~~~~~~~y~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~ 97 (297)
T 2o57_A 20 KDNAEIYYDDDDSDRFYFHVWGGEDIHV--GLYKEPVDQDEIREASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAA 97 (297)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHTTSCCCS--CCCCSSGGGSCHHHHHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHH
T ss_pred HHHHHHHcCCccchhHHHHHhCCCceEE--EecCCCCCCcchHHHHHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHH
Confidence 45688999987 59998877 466665 899877 7889999999999999988 8888999999999999999
Q ss_pred HHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC-CCccEEEEcccccccccHHHHHHHHHhc
Q 022810 79 LYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKW 156 (291)
Q Consensus 79 ~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~ 156 (291)
..+++.+ +.+|+|+|+|+.+++.++++....++ ++++++++|+.+++.+ ++||+|++..+++|+++...+++++.++
T Consensus 98 ~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~ 176 (297)
T 2o57_A 98 RFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARV 176 (297)
T ss_dssp HHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHH
T ss_pred HHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHH
Confidence 9999876 67999999999999999999988887 4799999999998766 7899999999999999999999999999
Q ss_pred cccCeeEEEEeeccCCcccccccCCccchhhhhccCCCCCCcHHHH-HHh-hcCcEEEEeeecC---CCcHHHHHHHHHH
Q 022810 157 MKEDTLLFVHHFCHKTFAYHFEDTNDDDWITKYFFTGGTMPSANLL-LYF-QDDVSVVDHWLVN---GKHYAQTSEEWLK 231 (291)
Q Consensus 157 L~pgG~l~i~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~---~~~~~~t~~~w~~ 231 (291)
|||||++++.++......... ....+...+..+. +.+...+ ..+ ..++.+++..... ..+|.+++..|.+
T Consensus 177 LkpgG~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (297)
T 2o57_A 177 LKPRGVMAITDPMKEDGIDKS---SIQPILDRIKLHD--MGSLGLYRSLAKECGLVTLRTFSRPDSLVHHYSKVKAELIK 251 (297)
T ss_dssp EEEEEEEEEEEEEECTTCCGG---GGHHHHHHHTCSS--CCCHHHHHHHHHHTTEEEEEEEECHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEEEEEEeccCCCCchH---HHHHHHHHhcCCC--CCCHHHHHHHHHHCCCeEEEEEECchhhHHHHHHHHHHHHH
Confidence 999999999887654322111 1122333322222 2233322 223 3567666543321 1345555555544
Q ss_pred HHHhcHHhHhhhHHhccCcchhHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEeecC
Q 022810 232 RMDNNLASIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVTHFLFRKKM 290 (291)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 290 (291)
.... + ....+ ...+..|...+..+.++++.|. ++.+++++|||.
T Consensus 252 ~~~~----~----~~~~~----~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~a~Kp~ 295 (297)
T 2o57_A 252 RSSE----I----ASFCS----PEFQANMKRGLEHWIEGGRAGK---LTWGGMLFRKSD 295 (297)
T ss_dssp THHH----H----TTTSC----HHHHHHHHHHHHHHHHHHHTTS---EEEEEEEEEESS
T ss_pred hHHH----H----hccCC----HHHHHHHHHHHHHHHHhccCCe---EEEEEEEEECCC
Confidence 3221 1 12233 2456667777777777777654 789999999994
No 6
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.91 E-value=3.1e-23 Score=176.44 Aligned_cols=220 Identities=19% Similarity=0.231 Sum_probs=162.7
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~ 128 (291)
......+++.+.+.++.+|||||||+|..+..+++.+ +.+|+|+|+|+.+++.++++.... ++++++++|+.+.+.+
T Consensus 41 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~ 117 (266)
T 3ujc_A 41 LEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEFP 117 (266)
T ss_dssp HHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCCC
Confidence 3456677788888899999999999999999999987 789999999999999998876544 4899999999988765
Q ss_pred -CCccEEEEccccccc--ccHHHHHHHHHhccccCeeEEEEeeccCCcccccccCCccchhhhhccCCC-CCCcHHHHH-
Q 022810 129 -ASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFCHKTFAYHFEDTNDDDWITKYFFTGG-TMPSANLLL- 203 (291)
Q Consensus 129 -~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~- 203 (291)
++||+|++..+++|+ ++...+++++.++|||||.+++.++....... .......+..+.+ ..++...+.
T Consensus 118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 191 (266)
T 3ujc_A 118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKEN------WDDEFKEYVKQRKYTLITVEEYAD 191 (266)
T ss_dssp TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGG------CCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCccc------chHHHHHHHhcCCCCCCCHHHHHH
Confidence 899999999999999 89999999999999999999998876554111 1111222222222 233433333
Q ss_pred Hh-hcCcEEEEeeecCCCcHHHHHHHHHHHHHhcHHhHhhhHHhccCcchhHHHHHHHHHHHHHHHHHhcCCCCceEEEE
Q 022810 204 YF-QDDVSVVDHWLVNGKHYAQTSEEWLKRMDNNLASIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVT 282 (291)
Q Consensus 204 ~~-~~~~~~~~~~~~~~~~~~~t~~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 282 (291)
.+ ..++..++.. ....+|..++..|...+.+...++... ++++....+...|+.|+.++.. |. .+-+
T Consensus 192 ~l~~~Gf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~----g~---~~w~ 259 (266)
T 3ujc_A 192 ILTACNFKNVVSK-DLSDYWNQLLEVEHKYLHENKEEFLKL----FSEKKFISLDDGWSRKIKDSKR----KM---QRWG 259 (266)
T ss_dssp HHHHTTCEEEEEE-ECHHHHHHHHHHHHHHHHHTHHHHHHH----SCHHHHHHHHHHHHHHHHHHHT----TS---EEEE
T ss_pred HHHHcCCeEEEEE-eCCHHHHHHHHHHHHHHHhCHHHHHHh----cCHHHHHHHHHHHHHHHHHHHc----Cc---ccce
Confidence 33 3467665543 334678889999999998877766543 5655556677779888877763 22 4455
Q ss_pred EEEEeec
Q 022810 283 HFLFRKK 289 (291)
Q Consensus 283 ~~~~~~~ 289 (291)
.+++|||
T Consensus 260 ~~~~~Kp 266 (266)
T 3ujc_A 260 YFKATKN 266 (266)
T ss_dssp EEEEECC
T ss_pred EEEEeCC
Confidence 5667998
No 7
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.89 E-value=4.2e-22 Score=173.94 Aligned_cols=211 Identities=16% Similarity=0.194 Sum_probs=157.9
Q ss_pred HhhcCCChHHHHHhhCCC-CCccccccCCCCCCHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCE
Q 022810 12 EQHYELPTSFFKLVLGKY-FKYSCCYFSDASKTLEDAEKAMLELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCK 89 (291)
Q Consensus 12 ~~~yd~~~~~y~~~~~~~-~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~p~~~ 89 (291)
.+|||.+++++..+.++. +.|+...|.. ....+......+++.+. +.++.+|||+|||+|.++..+++.+ +.+
T Consensus 68 ~~~y~~~~~~~~~~~~~~~~~y~~~~f~~----~~~~~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~ 142 (312)
T 3vc1_A 68 HHHYGIGPVDRAALGDPEHSEYEKKVIAE----LHRLESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSR 142 (312)
T ss_dssp CCSCCCSCCCHHHHCCTTSTTHHHHHHHH----HHHHHHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCE
T ss_pred hhhcCCchhHHHhhcCCCccccchHHHhh----hhhHHHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCE
Confidence 578999988888887777 8888877763 34444555567777777 7889999999999999999999886 789
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 90 ITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 90 v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
|+|+|+++.+++.|++++...++. +++++++|+.+++.+ ++||+|++..+++++ +...+++++.++|||||++++.+
T Consensus 143 v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 143 VEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEE
Confidence 999999999999999999998884 799999999988766 899999999999999 59999999999999999999988
Q ss_pred eccCCcccccccCCccchhhhhccCCCCCCcHHHHHH-h-hcCcEEEEeeecCCCcHHHHHHHHHHHHHhc
Q 022810 168 FCHKTFAYHFEDTNDDDWITKYFFTGGTMPSANLLLY-F-QDDVSVVDHWLVNGKHYAQTSEEWLKRMDNN 236 (291)
Q Consensus 168 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~t~~~w~~~l~~~ 236 (291)
+......... .....++.+.+.+. .++...+.. + ..++.+++.... -..++..|...+.++
T Consensus 222 ~~~~~~~~~~--~~~~~~~~~~~~~~--~~s~~~~~~~l~~aGf~~~~~~~~----~~~~~~~w~~~~~~~ 284 (312)
T 3vc1_A 222 GCWNPRYGQP--SKWVSQINAHFECN--IHSRREYLRAMADNRLVPHTIVDL----TPDTLPYWELRATSS 284 (312)
T ss_dssp EEECTTTCSC--CHHHHHHHHHHTCC--CCBHHHHHHHHHTTTEEEEEEEEC----HHHHHHHHHHHTTST
T ss_pred ccccccccch--hHHHHHHHhhhcCC--CCCHHHHHHHHHHCCCEEEEEEeC----CHHHHHHHHHHHHHh
Confidence 7665432110 01122333333332 334333333 3 245665554322 146788888876643
No 8
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.87 E-value=2.2e-20 Score=159.35 Aligned_cols=176 Identities=17% Similarity=0.221 Sum_probs=131.2
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC-
Q 022810 52 LELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME- 128 (291)
Q Consensus 52 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~- 128 (291)
...++..+. +.++.+|||||||+|..+..+++. ++.+|+|+|+|+.+++.+++++...++ ++++++++|+.+++.+
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (267)
T 3kkz_A 34 TLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRN 112 (267)
T ss_dssp HHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCT
T ss_pred HHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCC
Confidence 444555554 678899999999999999999987 577999999999999999999999888 4699999999988765
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCCcccccccCCccchhhhhccCCCCCCcHHHHHH-h-h
Q 022810 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKTFAYHFEDTNDDDWITKYFFTGGTMPSANLLLY-F-Q 206 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~-~ 206 (291)
++||+|++..+++++ +...+++++.++|||||++++.++.......... ....|... ++ .+++...+.. + .
T Consensus 113 ~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~--~~~~~~~~--~~--~~~~~~~~~~~l~~ 185 (267)
T 3kkz_A 113 EELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAE--INDFWMDA--YP--EIDTIPNQVAKIHK 185 (267)
T ss_dssp TCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHH--HHHHHHHH--CT--TCEEHHHHHHHHHH
T ss_pred CCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHH--HHHHHHHh--CC--CCCCHHHHHHHHHH
Confidence 899999999999999 8999999999999999999998876432211100 01223222 22 2344433333 2 3
Q ss_pred cCcEEEEeeecCC----CcHHHHHHHHHHHHHh
Q 022810 207 DDVSVVDHWLVNG----KHYAQTSEEWLKRMDN 235 (291)
Q Consensus 207 ~~~~~~~~~~~~~----~~~~~t~~~w~~~l~~ 235 (291)
.++..++...... .+|..++..|...+.+
T Consensus 186 aGf~~v~~~~~~~~~w~~~~~~~~~~~~~~~~~ 218 (267)
T 3kkz_A 186 AGYLPVATFILPENCWTDHYFTPKVAAQKIFLT 218 (267)
T ss_dssp TTEEEEEEEECCGGGTTTTTHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCHhHHHHHHHHHHHHHHHHHHH
Confidence 5677665543221 4678888999888754
No 9
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.86 E-value=4.7e-20 Score=156.06 Aligned_cols=122 Identities=15% Similarity=0.168 Sum_probs=109.5
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCcc
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM 127 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~ 127 (291)
...+..+++.+.+.++.+|||||||+|..+..+++.. +.+|+|+|+|+.+++.+++++...++ ++++++++|+.+.+.
T Consensus 22 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 100 (256)
T 1nkv_A 22 EEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA 100 (256)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc
Confidence 3456677777888899999999999999999999887 78999999999999999999998887 479999999998766
Q ss_pred CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022810 128 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 128 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
.++||+|++..+++++++...+++++.++|||||.+++.++...
T Consensus 101 ~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~ 144 (256)
T 1nkv_A 101 NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWR 144 (256)
T ss_dssp SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEET
T ss_pred CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCccc
Confidence 68899999999999999999999999999999999999877543
No 10
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.84 E-value=2e-19 Score=152.29 Aligned_cols=118 Identities=20% Similarity=0.298 Sum_probs=103.8
Q ss_pred HHHHHHHHc-CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC
Q 022810 51 MLELYCERS-RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME 128 (291)
Q Consensus 51 ~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~ 128 (291)
....+++.+ .+.++.+|||||||+|..+..+++..+ .+|+|+|+|+.+++.+++++...+++ +++++++|+.+++.+
T Consensus 33 ~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (257)
T 3f4k_A 33 ATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQ 111 (257)
T ss_dssp HHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSC
T ss_pred HHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCC
Confidence 344455555 467788999999999999999999974 49999999999999999999998884 599999999888766
Q ss_pred -CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 129 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 129 -~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
++||+|++..+++++ +...+++++.++|+|||++++.++..
T Consensus 112 ~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~ 153 (257)
T 3f4k_A 112 NEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASW 153 (257)
T ss_dssp TTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred CCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 899999999999999 78999999999999999999988753
No 11
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.83 E-value=7.3e-21 Score=163.85 Aligned_cols=117 Identities=14% Similarity=0.159 Sum_probs=102.9
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCc-cC-
Q 022810 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFE-ME- 128 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~-~~- 128 (291)
+..++..+... +.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...++ ++++++++|+.+.+ ..
T Consensus 58 l~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 134 (285)
T 4htf_A 58 LDRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLE 134 (285)
T ss_dssp HHHHHHHTCSS-CCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCS
T ss_pred HHHHHHhcCCC-CCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcC
Confidence 45556665544 679999999999999999987 78999999999999999999988887 58999999999876 33
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022810 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
++||+|++..+++++++...+++++.++|||||++++..++..
T Consensus 135 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (285)
T 4htf_A 135 TPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAH 177 (285)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHH
T ss_pred CCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 8999999999999999999999999999999999999887653
No 12
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.83 E-value=6.1e-20 Score=157.22 Aligned_cols=130 Identities=25% Similarity=0.373 Sum_probs=109.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcc
Q 022810 42 KTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVAD 121 (291)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d 121 (291)
..+......+...+.....+.++.+|||||||+|..+..+++..|+.+|+|+|+|+.+++.+++++...++++++++.+|
T Consensus 16 ~~~~~~~~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d 95 (276)
T 3mgg_A 16 LRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQAN 95 (276)
T ss_dssp -------CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred hhHHHHHHHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcc
Confidence 33443334444444455556789999999999999999999998889999999999999999999998888789999999
Q ss_pred ccCCccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022810 122 ISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 122 ~~~~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
+.+++.+ ++||+|++..+++++++...+++++.++|||||++++..+...
T Consensus 96 ~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 146 (276)
T 3mgg_A 96 IFSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHG 146 (276)
T ss_dssp GGGCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGG
T ss_pred cccCCCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 9987765 8999999999999999999999999999999999999887653
No 13
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.83 E-value=1.3e-19 Score=154.04 Aligned_cols=109 Identities=23% Similarity=0.344 Sum_probs=96.4
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCCccEEEEc
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDRIYSI 137 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~~~~D~v~~~ 137 (291)
++++.+|||||||+|..+..+++.+ ++++|+|+|+|+.|++.|++++...+. .+++++++|+.+++. ++||+|+++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~-~~~d~v~~~ 146 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI-ENASMVVLN 146 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC-CSEEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc-cccccceee
Confidence 5789999999999999999999875 578999999999999999999988776 479999999998765 579999999
Q ss_pred cccccccc--HHHHHHHHHhccccCeeEEEEeecc
Q 022810 138 EMFEHMKN--YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 138 ~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
.+++++++ ...++++++++|||||+|++.+...
T Consensus 147 ~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 147 FTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred eeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 99999854 4579999999999999999977654
No 14
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.82 E-value=6e-20 Score=155.96 Aligned_cols=121 Identities=15% Similarity=0.121 Sum_probs=107.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~ 128 (291)
...+..+++.+...++.+|||||||+|.++..+++.. .+|+|+|+|+.+++.+++++...+.+++.++++|+.+++.+
T Consensus 23 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~ 100 (260)
T 1vl5_A 23 GSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFT 100 (260)
T ss_dssp CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSC
T ss_pred HHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCC
Confidence 3445667777777889999999999999999999884 59999999999999999999888877899999999998766
Q ss_pred -CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022810 129 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 129 -~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
++||+|+++.+++|+++...+++++.++|||||++++..+..+
T Consensus 101 ~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~ 144 (260)
T 1vl5_A 101 DERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAP 144 (260)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBC
T ss_pred CCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCC
Confidence 8999999999999999999999999999999999999776543
No 15
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.82 E-value=5e-21 Score=161.94 Aligned_cols=186 Identities=19% Similarity=0.241 Sum_probs=129.2
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CC
Q 022810 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-AS 130 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~ 130 (291)
...+.+.+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.++++.. ..++.++++|+.+++.+ ++
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~ 108 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHG-AKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAIEPDA 108 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCCCTTC
T ss_pred HHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCCCCCC
Confidence 3445566666688999999999999999999874 2399999999999999988764 34799999999988765 89
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCCcccccccCCccchhhhhccCCCCCCcHHHHHHhhcCcE
Q 022810 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKTFAYHFEDTNDDDWITKYFFTGGTMPSANLLLYFQDDVS 210 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (291)
||+|++..+++++++...+++++.++|||||.+++..+++...... ...|... ..+.........++.....
T Consensus 109 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~ 180 (253)
T 3g5l_A 109 YNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADG-----RQDWYTD---ETGNKLHWPVDRYFNESMR 180 (253)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSS-----SCSCEEC---SSCCEEEEEECCTTCCCEE
T ss_pred eEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCc-----cccceec---cCCceEEEEeccccccceE
Confidence 9999999999999999999999999999999999987654321110 1112110 0000000000001111111
Q ss_pred EEEeeec-CCCcHHHHHHHHHHHHHhcHHhHhhhHHhccCc
Q 022810 211 VVDHWLV-NGKHYAQTSEEWLKRMDNNLASIKPIMESTYGK 250 (291)
Q Consensus 211 ~~~~~~~-~~~~~~~t~~~w~~~l~~~~~~~~~~~~~~~~~ 250 (291)
...|.. ....|++|..+|.+.|.++||++.+..+...++
T Consensus 181 -~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~~~~~ 220 (253)
T 3g5l_A 181 -TSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEPEPAP 220 (253)
T ss_dssp -EEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEECCCCCG
T ss_pred -EEeeccccCccEecCHHHHHHHHHHcCCeeeeeecCCCch
Confidence 112211 112355689999999999999998876555543
No 16
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.82 E-value=8e-20 Score=156.05 Aligned_cols=155 Identities=10% Similarity=0.114 Sum_probs=120.3
Q ss_pred hhHHHhhcCCChHHHHHhhCCCCCcccc---ccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHH
Q 022810 8 DKAKEQHYELPTSFFKLVLGKYFKYSCC---YFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK 84 (291)
Q Consensus 8 ~~~~~~~yd~~~~~y~~~~~~~~~y~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~ 84 (291)
...++++|+....+|+..++..+..... .+.. ....+. ...++..-...+.+.++.+|||||||+|.++..++.+
T Consensus 66 ~~~~~~~y~~~~~~~E~~wa~~l~~~~~p~~~l~~-fpy~~~-~~~l~~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~ 143 (298)
T 3fpf_A 66 LSLIRKFYVNLGMKLEMEKAQEVIESDSPWETLRS-FYFYPR-YLELLKNEAALGRFRRGERAVFIGGGPLPLTGILLSH 143 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHT-STTHHH-HHHHHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCChHHhhcc-CCCccc-HHHHHHHHHHHcCCCCcCEEEEECCCccHHHHHHHHH
Confidence 3578899999999999988875533211 0000 011222 3344444345678899999999999999877555555
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcccccccccHHHHHHHHHhccccCeeEE
Q 022810 85 YSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLF 164 (291)
Q Consensus 85 ~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 164 (291)
.++++|+|+|+|+.+++.|+++++..++++++++++|+.+++ .++||+|++... .++...+++++.++|||||+++
T Consensus 144 ~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~-d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lv 219 (298)
T 3fpf_A 144 VYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID-GLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRII 219 (298)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG-GCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEE
T ss_pred ccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC-CCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEE
Confidence 568999999999999999999999888878999999998875 588999998654 5788999999999999999999
Q ss_pred EEee
Q 022810 165 VHHF 168 (291)
Q Consensus 165 i~~~ 168 (291)
+...
T Consensus 220 v~~~ 223 (298)
T 3fpf_A 220 YRTY 223 (298)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 8764
No 17
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.81 E-value=4.4e-19 Score=145.28 Aligned_cols=116 Identities=13% Similarity=0.133 Sum_probs=95.5
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh------------CCCCeEEEE
Q 022810 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL------------ELQNVEIIV 119 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~------------~~~~i~~~~ 119 (291)
+..++..+.+.++.+|||+|||+|..+..++++ +.+|+|+|+|+.|++.|+++.... ...++++++
T Consensus 11 l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 88 (203)
T 1pjz_A 11 LQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWC 88 (203)
T ss_dssp HHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEE
T ss_pred HHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEE
Confidence 334455566778899999999999999999988 789999999999999998875421 124799999
Q ss_pred ccccCCccC--CCccEEEEcccccccc--cHHHHHHHHHhccccCeeEEEEeec
Q 022810 120 ADISTFEME--ASYDRIYSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 120 ~d~~~~~~~--~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+|+.+++.. ++||+|++..++++++ +...+++++.++|||||++++.+..
T Consensus 89 ~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~ 142 (203)
T 1pjz_A 89 GDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLE 142 (203)
T ss_dssp ECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEES
T ss_pred CccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEe
Confidence 999998764 6899999999999884 4567999999999999996555543
No 18
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.81 E-value=3.7e-19 Score=147.04 Aligned_cols=120 Identities=22% Similarity=0.302 Sum_probs=107.6
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CC
Q 022810 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-AS 130 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~ 130 (291)
..+++.+...++.+|||+|||+|.++..+++.. |..+|+|+|+|+.+++.+++++...++++++++.+|+.+.+.+ ++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 106 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNT 106 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSC
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCC
Confidence 455566677889999999999999999999985 6689999999999999999999998887899999999987765 78
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022810 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 172 (291)
||+|++..+++++++...+++++.++|+|||.+++.++....
T Consensus 107 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 148 (219)
T 3dh0_A 107 VDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEE 148 (219)
T ss_dssp EEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred eeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccc
Confidence 999999999999999999999999999999999998776543
No 19
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.80 E-value=1.7e-19 Score=150.71 Aligned_cols=118 Identities=24% Similarity=0.354 Sum_probs=102.0
Q ss_pred HHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCc
Q 022810 53 ELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASY 131 (291)
Q Consensus 53 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 131 (291)
..+++.+. ..++.+|||+|||+|..+..+++.+|+.+++|+|+|+.+++.+++++...+ +++++++|+.+.+.+++|
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~~~f 110 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDFEEKY 110 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCCCSCE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCCCCCc
Confidence 44445444 457889999999999999999999988999999999999999998875544 799999999998766899
Q ss_pred cEEEEcccccccccHH--HHHHHHHhccccCeeEEEEeeccCC
Q 022810 132 DRIYSIEMFEHMKNYQ--NLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 132 D~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~ 172 (291)
|+|++..+++++++.. .+++++.++|||||.+++.++....
T Consensus 111 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 111 DMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred eEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 9999999999997655 5999999999999999998876543
No 20
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.80 E-value=3e-19 Score=151.03 Aligned_cols=152 Identities=11% Similarity=0.055 Sum_probs=112.0
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC-CccCCC
Q 022810 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~-~~~~~~ 130 (291)
...+++.+.+.++.+|||||||+|.++..++++ +.+|+|+|+|+.|++.|++++....+ ...+...+... ....++
T Consensus 34 ~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~~v-~~~~~~~~~~~~~~~~~~ 110 (261)
T 3iv6_A 34 RENDIFLENIVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADRCV-TIDLLDITAEIPKELAGH 110 (261)
T ss_dssp HHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSSCC-EEEECCTTSCCCGGGTTC
T ss_pred HHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhccc-eeeeeecccccccccCCC
Confidence 456667778889999999999999999999987 78999999999999999988654311 22222222200 111368
Q ss_pred ccEEEEccccccc--ccHHHHHHHHHhccccCeeEEEEeeccCCc----------------------ccccccCCccchh
Q 022810 131 YDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFCHKTF----------------------AYHFEDTNDDDWI 186 (291)
Q Consensus 131 ~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~----------------------~~~~~~~~~~~w~ 186 (291)
||+|+++.+++|+ ++...+++++.++| |||+++++....... ...........|+
T Consensus 111 fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~i 189 (261)
T 3iv6_A 111 FDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLGFYDIDLKLIEYGEQSGTLAKFFDPSDKTFHFREAGDVL 189 (261)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHHHHHHHHTTTCHHHHEETTTTEEEGGGTTHHH
T ss_pred ccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccCcccccHHHHHHHHhcCCeeeeecCcccceehhhhhhHH
Confidence 9999999999987 45677999999999 999999986542110 0001113457899
Q ss_pred hhhccCCCCCCcHHHHHHhhc
Q 022810 187 TKYFFTGGTMPSANLLLYFQD 207 (291)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~ 207 (291)
.+++||+|.+|+..++.....
T Consensus 190 ~~~~~p~g~~~~~~~~~~~~~ 210 (261)
T 3iv6_A 190 DRALVPHGLIDKPTLLEWYRR 210 (261)
T ss_dssp HHHCCCCTTCCHHHHHHHHHH
T ss_pred HhccCCCCcccHHHHHHHHHh
Confidence 999999999998887775543
No 21
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.80 E-value=7.2e-19 Score=147.52 Aligned_cols=120 Identities=18% Similarity=0.256 Sum_probs=107.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~- 128 (291)
.....+++.+.+.++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.+++++...+++++.++.+|+.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 8 HSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPY--VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCT
T ss_pred CCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCC
Confidence 34456667778889999999999999999999987 469999999999999999999888887899999999988766
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022810 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
++||+|++..+++|+++...+++++.++|||||.+++..+...
T Consensus 86 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 128 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAP 128 (239)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred CcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 7899999999999999999999999999999999999876543
No 22
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.80 E-value=7.1e-19 Score=144.93 Aligned_cols=117 Identities=21% Similarity=0.282 Sum_probs=104.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~ 128 (291)
.....+++.+...++ +|||+|||+|.++..+++. ++.+++|+|+|+.+++.+++++...++ ++++++++|+.+++.+
T Consensus 31 ~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (219)
T 3dlc_A 31 IIAENIINRFGITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIE 108 (219)
T ss_dssp HHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSC
T ss_pred HHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCC
Confidence 445666677776666 9999999999999999988 688999999999999999999998887 4799999999997766
Q ss_pred -CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 129 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 129 -~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
++||+|++..+++++++...+++++.++|+|||.+++...
T Consensus 109 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 109 DNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEec
Confidence 8899999999999999999999999999999999999764
No 23
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.79 E-value=5.4e-19 Score=148.52 Aligned_cols=105 Identities=19% Similarity=0.285 Sum_probs=93.1
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccccc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFE 141 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~l~ 141 (291)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... +++++++|+.+...+++||+|++..+++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~~~~~~fD~v~~~~~l~ 114 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEH--FNDITCVEASEEAISHAQGRLKD----GITYIHSRFEDAQLPRRYDNIVLTHVLE 114 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTT--CSCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGCCCSSCEEEEEEESCGG
T ss_pred cCCCcEEEECCCCCHHHHHHHHh--CCcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHcCcCCcccEEEEhhHHH
Confidence 46779999999999999999987 55899999999999999876532 6899999998875448999999999999
Q ss_pred ccccHHHHHHHHH-hccccCeeEEEEeeccCC
Q 022810 142 HMKNYQNLLKKIS-KWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 142 ~~~~~~~~l~~~~-~~L~pgG~l~i~~~~~~~ 172 (291)
|++++..+++++. ++|||||++++.+++...
T Consensus 115 ~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~ 146 (250)
T 2p7i_A 115 HIDDPVALLKRINDDWLAEGGRLFLVCPNANA 146 (250)
T ss_dssp GCSSHHHHHHHHHHTTEEEEEEEEEEEECTTC
T ss_pred hhcCHHHHHHHHHHHhcCCCCEEEEEcCChHH
Confidence 9999999999999 999999999998876543
No 24
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.79 E-value=1.5e-18 Score=143.38 Aligned_cols=116 Identities=19% Similarity=0.297 Sum_probs=98.0
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-----CeEEEEccccCC
Q 022810 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-----NVEIIVADISTF 125 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~i~~~~~d~~~~ 125 (291)
..+.+++.+...++.+|||||||+|.++..+++..+..+|+|+|+|+.+++.+++++...+++ +++++++|+...
T Consensus 17 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (217)
T 3jwh_A 17 RMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ 96 (217)
T ss_dssp HHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc
Confidence 344445555556788999999999999999998876689999999999999999998776653 799999999776
Q ss_pred ccC-CCccEEEEcccccccccH--HHHHHHHHhccccCeeEEEE
Q 022810 126 EME-ASYDRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 126 ~~~-~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~ 166 (291)
+.. ++||+|++..+++++++. ..+++++.++|||||++++.
T Consensus 97 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 97 DKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp CGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred cccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 655 799999999999999754 89999999999999966554
No 25
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.79 E-value=8.4e-19 Score=144.97 Aligned_cols=111 Identities=21% Similarity=0.264 Sum_probs=95.8
Q ss_pred HHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEE
Q 022810 55 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRI 134 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v 134 (291)
+++.+...++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++.. .+++++++|+.+++.+++||+|
T Consensus 37 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~~~~fD~v 110 (220)
T 3hnr_A 37 ILEDVVNKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEVPTSIDTI 110 (220)
T ss_dssp HHHHHHHTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCCCSCCSEE
T ss_pred HHHHhhccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCCCCCeEEE
Confidence 333334457889999999999999999987 7899999999999999988754 3789999999987666899999
Q ss_pred EEcccccccccHHH--HHHHHHhccccCeeEEEEeeccC
Q 022810 135 YSIEMFEHMKNYQN--LLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 135 ~~~~~l~~~~~~~~--~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
++..+++++++... +++++.++|||||.+++.++...
T Consensus 111 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 149 (220)
T 3hnr_A 111 VSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFA 149 (220)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBS
T ss_pred EECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEecccc
Confidence 99999999988776 99999999999999999876543
No 26
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.78 E-value=1.4e-18 Score=143.58 Aligned_cols=118 Identities=20% Similarity=0.314 Sum_probs=98.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-----CeEEEEcccc
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-----NVEIIVADIS 123 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~i~~~~~d~~ 123 (291)
....+.+++.+...++.+|||||||+|.++..+++..+..+|+|+|+|+.+++.+++++...+++ +++++++|+.
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 15 QQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV 94 (219)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS
T ss_pred HHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc
Confidence 33444455555446788999999999999999998876689999999999999999998776653 7999999997
Q ss_pred CCccC-CCccEEEEcccccccccH--HHHHHHHHhccccCeeEEEE
Q 022810 124 TFEME-ASYDRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 124 ~~~~~-~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~ 166 (291)
..+.. ++||+|++..+++++++. ..+++++.++|||||++++.
T Consensus 95 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 95 YRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp SCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred ccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 76654 899999999999999755 79999999999999955443
No 27
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.78 E-value=2.3e-19 Score=156.85 Aligned_cols=178 Identities=14% Similarity=0.133 Sum_probs=129.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~ 128 (291)
.+...+++.+...++.+|||||||+|.++..+++..+ ..+|+++|+|+.+++.|++++...++++++++.+|+.+....
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~ 141 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE 141 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc
Confidence 5567778888888999999999999999999998865 367999999999999999999998887799999999885443
Q ss_pred -CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC--CcccccccCCccchhhhhccCCCCCCcHHHHHH-
Q 022810 129 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK--TFAYHFEDTNDDDWITKYFFTGGTMPSANLLLY- 204 (291)
Q Consensus 129 -~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~--~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~- 204 (291)
++||+|++..+++++. +.+.+.|||||++++...... .............|..++++|.+.+|.......
T Consensus 142 ~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~~~ 215 (317)
T 1dl5_A 142 FSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPINLKLSRRQPAFLFKKKDPYLVGNYKLETRFITAGGNLGNL 215 (317)
T ss_dssp GCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBCBGGGTBCEEEEEEEETTEEEEEEEEECCCCBCCGGGSCH
T ss_pred CCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEECCCCcccceEEEEEEeCCcEEEEEeccEEEEEccCccccc
Confidence 7899999999999886 567889999999999865442 111100011134688888888887766432221
Q ss_pred hhcCcEEEEeeecCCCcHHHHHHHHHH-HHHhcHH
Q 022810 205 FQDDVSVVDHWLVNGKHYAQTSEEWLK-RMDNNLA 238 (291)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~t~~~w~~-~l~~~~~ 238 (291)
........ ....|.+|++.|.. ++.+...
T Consensus 216 ~~~~~~~~-----~~~~y~~tl~~~~~~~f~~~~~ 245 (317)
T 1dl5_A 216 LERNRKLL-----REFPFNREILLVRSHIFVELVD 245 (317)
T ss_dssp HHHHHTTC-----CCCCEEEEEECTTHHHHHHHHH
T ss_pred cccchhhh-----hcccchhhccCcchhhhhhhhh
Confidence 11111100 11226677778887 6665443
No 28
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.78 E-value=2.8e-18 Score=140.14 Aligned_cols=140 Identities=16% Similarity=0.231 Sum_probs=111.4
Q ss_pred hHHHhhcCCChHHHHHhhCCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCC
Q 022810 9 KAKEQHYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNC 88 (291)
Q Consensus 9 ~~~~~~yd~~~~~y~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~ 88 (291)
+.+..+||..++.|...+........ . ....+..++... +.+|||+|||+|.++..+++. +.
T Consensus 3 ~~~~~~y~~~a~~y~~~~~~~~~~~~-------~-----~~~~l~~~~~~~----~~~vLDiGcG~G~~~~~l~~~--~~ 64 (203)
T 3h2b_A 3 DDVSKAYSSPTFDAEALLGTVISAED-------P-----DRVLIEPWATGV----DGVILDVGSGTGRWTGHLASL--GH 64 (203)
T ss_dssp CHHHHHHHCTTTCHHHHTCSSCCTTC-------T-----THHHHHHHHHHC----CSCEEEETCTTCHHHHHHHHT--TC
T ss_pred HHHHHHHhhHHHHHHHHhhhhccccH-------H-----HHHHHHHHhccC----CCeEEEecCCCCHHHHHHHhc--CC
Confidence 45778888888888776644222210 0 123344444332 779999999999999999987 77
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccccccc--cHHHHHHHHHhccccCeeEEE
Q 022810 89 KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMFEHMK--NYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 89 ~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i 165 (291)
+|+|+|+|+.+++.++++ .+++.++++|+.+++.+ ++||+|++..++++++ +...+++++.++|+|||.+++
T Consensus 65 ~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 65 QIEGLEPATRLVELARQT-----HPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp CEEEECCCHHHHHHHHHH-----CTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEE
T ss_pred eEEEEeCCHHHHHHHHHh-----CCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 999999999999998876 23789999999998765 8999999999999996 899999999999999999999
Q ss_pred EeeccC
Q 022810 166 HHFCHK 171 (291)
Q Consensus 166 ~~~~~~ 171 (291)
..+...
T Consensus 140 ~~~~~~ 145 (203)
T 3h2b_A 140 SFFSGP 145 (203)
T ss_dssp EEECCS
T ss_pred EEccCC
Confidence 887554
No 29
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.78 E-value=4.6e-18 Score=138.12 Aligned_cols=113 Identities=19% Similarity=0.314 Sum_probs=99.8
Q ss_pred HHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEE
Q 022810 55 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRI 134 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v 134 (291)
+++.+...++.+|||+|||+|..+..+++. +.+++++|+|+.+++.+++++...+.+++.++.+|+.+.+..++||+|
T Consensus 24 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v 101 (199)
T 2xvm_A 24 VLEAVKVVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFI 101 (199)
T ss_dssp HHHHTTTSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEEEE
T ss_pred HHHHhhccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCceEE
Confidence 344455667889999999999999999987 789999999999999999999888877799999999887656789999
Q ss_pred EEcccccccc--cHHHHHHHHHhccccCeeEEEEeec
Q 022810 135 YSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 135 ~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
++..++++++ +...+++++.++|+|||.+++..+.
T Consensus 102 ~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 102 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp EEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEee
Confidence 9999999986 8899999999999999998776543
No 30
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.78 E-value=2e-18 Score=148.63 Aligned_cols=119 Identities=21% Similarity=0.352 Sum_probs=105.1
Q ss_pred HHHHHHHHHc-CCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc
Q 022810 50 AMLELYCERS-RLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM 127 (291)
Q Consensus 50 ~~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~ 127 (291)
..+..+++.+ .+.++.+|||||||+|..+..+++.+| +.+|+|+|+|+.+++.+++++...+. +++++++|+.+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~ 86 (284)
T 3gu3_A 8 DYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIEL 86 (284)
T ss_dssp HHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCC
T ss_pred HHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCc
Confidence 3344454443 556889999999999999999999887 48999999999999999999887765 89999999999876
Q ss_pred CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 128 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 128 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+++||+|++..+++++++...+++++.++|||||++++..+.
T Consensus 87 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 87 NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 789999999999999999999999999999999999998876
No 31
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.78 E-value=1.1e-17 Score=141.43 Aligned_cols=107 Identities=12% Similarity=0.163 Sum_probs=90.5
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH-----------------hCCCCeEEEEcccc
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV-----------------LELQNVEIIVADIS 123 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~-----------------~~~~~i~~~~~d~~ 123 (291)
..++.+|||+|||+|..+..|++. |.+|+|||+|+.+++.|+++... ....+++++++|+.
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred CCCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 357889999999999999999987 88999999999999999766531 01247999999999
Q ss_pred CCccC--CCccEEEEcccccccc--cHHHHHHHHHhccccCeeEEEEeec
Q 022810 124 TFEME--ASYDRIYSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 124 ~~~~~--~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+++.. ++||+|++..++++++ +...+++++.++|||||++++.+..
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLS 193 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 98765 7999999999998884 4677999999999999999766554
No 32
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.78 E-value=1.6e-18 Score=142.82 Aligned_cols=111 Identities=14% Similarity=0.160 Sum_probs=95.9
Q ss_pred HHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCcc
Q 022810 54 LYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYD 132 (291)
Q Consensus 54 ~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D 132 (291)
.+++.+. ..++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++ .+.++++++++|+.+....++||
T Consensus 36 ~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~~~~~~~D 109 (218)
T 3ou2_A 36 AALERLRAGNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDWTPDRQWD 109 (218)
T ss_dssp HHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSCCCSSCEE
T ss_pred HHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccCCCCCcee
Confidence 3334333 567789999999999999999988 7899999999999998877 45568999999999884348999
Q ss_pred EEEEcccccccccH--HHHHHHHHhccccCeeEEEEeecc
Q 022810 133 RIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 133 ~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+|++..+++++++. ..+++++.++|+|||.+++.+++.
T Consensus 110 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 110 AVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 99999999999874 889999999999999999988766
No 33
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.77 E-value=1.2e-17 Score=136.60 Aligned_cols=117 Identities=15% Similarity=0.225 Sum_probs=102.8
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-C
Q 022810 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-A 129 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~ 129 (291)
....++..+...++.+|||+|||+|.++..+++..|..+|+++|+|+.+++.+++++...++++++++.+|+.+.... .
T Consensus 28 i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 107 (204)
T 3e05_A 28 VRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLP 107 (204)
T ss_dssp HHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSC
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCC
Confidence 335566777888999999999999999999999987799999999999999999999998887899999999765444 7
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 130 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+||+|++..+++ +...+++++.++|+|||++++..+..
T Consensus 108 ~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~ 145 (204)
T 3e05_A 108 DPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTL 145 (204)
T ss_dssp CCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBH
T ss_pred CCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 899999998775 77899999999999999999976543
No 34
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.77 E-value=1.9e-18 Score=146.36 Aligned_cols=117 Identities=21% Similarity=0.262 Sum_probs=103.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCC
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEA 129 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~ 129 (291)
.....+++.+...++.+|||||||+|..+..+++.+|+.+|+++|+|+.+++.++++ .+++.++.+|+.+++..+
T Consensus 20 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~ 94 (259)
T 2p35_A 20 RPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWKPAQ 94 (259)
T ss_dssp HHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCCCSS
T ss_pred HHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcCccC
Confidence 334566777777788999999999999999999988889999999999999998876 247899999999877448
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022810 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 130 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
+||+|+++.+++++++...+++++.++|+|||.+++.++...
T Consensus 95 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 136 (259)
T 2p35_A 95 KADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNL 136 (259)
T ss_dssp CEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCT
T ss_pred CcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCC
Confidence 899999999999999999999999999999999999887543
No 35
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.77 E-value=2.1e-18 Score=144.67 Aligned_cols=105 Identities=19% Similarity=0.224 Sum_probs=95.7
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcc-ccc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIE-MFE 141 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~-~l~ 141 (291)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++....+. ++.++++|+.+.+.+++||+|++.. +++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNINRKFDLITCCLDSTN 113 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCCSCCEEEEEECTTGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCccCCceEEEEcCcccc
Confidence 6789999999999999999987 78999999999999999999888776 7999999999876668899999998 999
Q ss_pred cc---ccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 142 HM---KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 142 ~~---~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
|+ ++...+++++.++|+|||.+++..++.
T Consensus 114 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 114 YIIDSDDLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp GCCSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 99 678899999999999999999977754
No 36
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.76 E-value=4.1e-18 Score=142.94 Aligned_cols=163 Identities=17% Similarity=0.231 Sum_probs=116.1
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC--ccC-CCccEEEEc
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF--EME-ASYDRIYSI 137 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~--~~~-~~~D~v~~~ 137 (291)
+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ +.++.+|+.+. +.+ ++||+|++.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKSLPDKYLDGVMIS 108 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHTSCTTCBSEEEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhhcCCCCeeEEEEC
Confidence 356789999999999999999988 77999999999999888754 77889998875 334 899999999
Q ss_pred ccccccc--cHHHHHHHHHhccccCeeEEEEeeccCCcccccccCCccchhhhhccCCC-CCCcHHHHH-Hh-hcCcEEE
Q 022810 138 EMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCHKTFAYHFEDTNDDDWITKYFFTGG-TMPSANLLL-YF-QDDVSVV 212 (291)
Q Consensus 138 ~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~-~~-~~~~~~~ 212 (291)
.+++|++ +...+++++.++|||||++++.+++..... .+...+..+.. ...+...+. .+ ..++.++
T Consensus 109 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~ 179 (240)
T 3dli_A 109 HFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLY---------SLINFYIDPTHKKPVHPETLKFILEYLGFRDV 179 (240)
T ss_dssp SCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHH---------HHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEE
T ss_pred CchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhH---------HHHHHhcCccccccCCHHHHHHHHHHCCCeEE
Confidence 9999997 569999999999999999999988754321 12222222322 222323332 22 2456554
Q ss_pred EeeecC---------CCcHHHHHHHHHHH-HHhcHHhHhhh
Q 022810 213 DHWLVN---------GKHYAQTSEEWLKR-MDNNLASIKPI 243 (291)
Q Consensus 213 ~~~~~~---------~~~~~~t~~~w~~~-l~~~~~~~~~~ 243 (291)
+..... ..+ .+++..|.++ +.++...+...
T Consensus 180 ~~~~~~~~~~~~~l~~~~-~~~l~~w~~~~~~~~~~~~~~~ 219 (240)
T 3dli_A 180 KIEFFEECEELTKLAKID-SNTVSEEVIRVINENIEKLNRI 219 (240)
T ss_dssp EEEEECCCCTTTSCCCCC-CSSSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccCcccccccccc-cccccHHHHHhhhhhHHHHHhh
Confidence 433221 123 5678889988 66666655543
No 37
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.76 E-value=1.3e-18 Score=147.33 Aligned_cols=110 Identities=15% Similarity=0.193 Sum_probs=92.2
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-C
Q 022810 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-A 129 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~ 129 (291)
+++.+.+..+ .+.+|||||||+|..+..+++. +.+|+|+|+|+.|++.|++ .+++.++++|+++++.+ +
T Consensus 29 l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~------~~~v~~~~~~~e~~~~~~~ 98 (257)
T 4hg2_A 29 LFRWLGEVAP--ARGDALDCGCGSGQASLGLAEF--FERVHAVDPGEAQIRQALR------HPRVTYAVAPAEDTGLPPA 98 (257)
T ss_dssp HHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTT--CSEEEEEESCHHHHHTCCC------CTTEEEEECCTTCCCCCSS
T ss_pred HHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHh--CCEEEEEeCcHHhhhhhhh------cCCceeehhhhhhhcccCC
Confidence 3444544433 4569999999999999999987 6799999999999887653 24799999999998877 8
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022810 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 130 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
+||+|++..++|++ +...+++++.++|||||+|++......
T Consensus 99 sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 99 SVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred cccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 99999999999877 578899999999999999988776543
No 38
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.76 E-value=2.9e-18 Score=153.75 Aligned_cols=111 Identities=22% Similarity=0.269 Sum_probs=98.3
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHh-----C-C--CCeEEEEccccCC------
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVL-----E-L--QNVEIIVADISTF------ 125 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~-p~~~v~~vD~s~~~~~~a~~~~~~~-----~-~--~~i~~~~~d~~~~------ 125 (291)
..++.+|||||||+|..+..+++.+ |+.+|+|+|+|+.+++.+++++... | . ++++++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 4578899999999999999999885 6789999999999999999988754 3 2 4899999999886
Q ss_pred ccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022810 126 EME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 126 ~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
+.+ ++||+|+++.+++++++...+++++.++|||||++++.++...
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 207 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYAD 207 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccc
Confidence 555 7999999999999999999999999999999999999876543
No 39
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.76 E-value=3.6e-18 Score=140.78 Aligned_cols=112 Identities=13% Similarity=0.138 Sum_probs=97.4
Q ss_pred HHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEE
Q 022810 55 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRI 134 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v 134 (291)
+...+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....+ +++++++|+.+.+..++||+|
T Consensus 43 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~~~fD~v 118 (216)
T 3ofk_A 43 LRLSLSSGAVSNGLEIGCAAGAFTEKLAPH--CKRLTVIDVMPRAIGRACQRTKRWS--HISWAATDILQFSTAELFDLI 118 (216)
T ss_dssp HHHHTTTSSEEEEEEECCTTSHHHHHHGGG--EEEEEEEESCHHHHHHHHHHTTTCS--SEEEEECCTTTCCCSCCEEEE
T ss_pred HHHHcccCCCCcEEEEcCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcccCC--CeEEEEcchhhCCCCCCccEE
Confidence 334556677889999999999999999987 5799999999999999998876543 799999999998755899999
Q ss_pred EEcccccccccH---HHHHHHHHhccccCeeEEEEeecc
Q 022810 135 YSIEMFEHMKNY---QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 135 ~~~~~l~~~~~~---~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+++.+++|+++. ..+++++.++|+|||.+++.++..
T Consensus 119 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 119 VVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp EEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred EEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 999999999876 567999999999999999987654
No 40
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.76 E-value=7.3e-18 Score=136.25 Aligned_cols=110 Identities=15% Similarity=0.238 Sum_probs=96.4
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---CCCccEEEEcc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---EASYDRIYSIE 138 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~---~~~~D~v~~~~ 138 (291)
.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++...++++++++++|+.+... .++||+|+++.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 46889999999999999988775 356899999999999999999999888789999999988642 37899999999
Q ss_pred ccccc-ccHHHHHHHHHh--ccccCeeEEEEeeccCC
Q 022810 139 MFEHM-KNYQNLLKKISK--WMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 139 ~l~~~-~~~~~~l~~~~~--~L~pgG~l~i~~~~~~~ 172 (291)
++++. ++...+++.+.+ +|+|||++++.......
T Consensus 122 p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 122 PYNVDSADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp CTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred CCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 98775 778899999999 99999999998876544
No 41
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.76 E-value=1.1e-17 Score=143.09 Aligned_cols=131 Identities=16% Similarity=0.192 Sum_probs=112.2
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHH------HHHHHHHHHHHhCC-C
Q 022810 42 KTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKT------QKEFIEEQCRVLEL-Q 113 (291)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-p~~~v~~vD~s~~------~~~~a~~~~~~~~~-~ 113 (291)
..+..++.+....+++.+.+.++.+|||||||+|.++..+++.+ |..+|+|+|+|+. +++.+++++...++ +
T Consensus 22 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~ 101 (275)
T 3bkx_A 22 RTIQRRQTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGD 101 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGG
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCC
Confidence 35677788888889999888999999999999999999999885 5589999999997 99999999988777 5
Q ss_pred CeEEEEcc-c--cCCccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022810 114 NVEIIVAD-I--STFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 114 ~i~~~~~d-~--~~~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 172 (291)
+++++.+| + ...+.+ ++||+|++..+++|+++...+++.+.++++|||.+++.++....
T Consensus 102 ~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~ 164 (275)
T 3bkx_A 102 RLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQP 164 (275)
T ss_dssp GEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSC
T ss_pred ceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCC
Confidence 79999998 3 333434 78999999999999999888888888888889999998876643
No 42
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.76 E-value=2.1e-18 Score=144.77 Aligned_cols=107 Identities=12% Similarity=0.168 Sum_probs=94.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEccccc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMFE 141 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~~~l~ 141 (291)
++.+|||||||+|..+..+++.. ..+|+++|+|+.+++.+++++...+..++.++.+|+.+++.+ ++||+|++..+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 68899999999999999998875 569999999999999999988766444689999999887765 6899999999999
Q ss_pred cccc--HHHHHHHHHhccccCeeEEEEeecc
Q 022810 142 HMKN--YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 142 ~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
++++ ...+++++.++|+|||++++.++..
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDNMA 188 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEccC
Confidence 9977 4589999999999999999987654
No 43
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.76 E-value=4e-18 Score=141.03 Aligned_cols=107 Identities=11% Similarity=0.102 Sum_probs=91.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC-c--c-CCCccEEEEcc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-E--M-EASYDRIYSIE 138 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~-~--~-~~~~D~v~~~~ 138 (291)
++.+|||||||+|.++..+++.+|+..|+|+|+|+.+++.|++++...++++++++++|+.++ + . +++||.|+++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 577999999999999999999998899999999999999999999999888899999999874 2 2 38999999985
Q ss_pred cccccc--cH------HHHHHHHHhccccCeeEEEEeec
Q 022810 139 MFEHMK--NY------QNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 139 ~l~~~~--~~------~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+..+.. .. ..+++.+.++|||||++++.+..
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 443331 11 35999999999999999997653
No 44
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.75 E-value=4.9e-18 Score=139.55 Aligned_cols=135 Identities=15% Similarity=0.214 Sum_probs=106.6
Q ss_pred cchhHHHhhcCCChHHHHHhhCCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC
Q 022810 6 QTDKAKEQHYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY 85 (291)
Q Consensus 6 ~~~~~~~~~yd~~~~~y~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~ 85 (291)
..+.....+||...+.|...... ...+..++.. +.++.+|||+|||+|.++..+++.
T Consensus 8 ~~~~~~~~~~~~~~~~y~~~~~~--------------------~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~- 64 (211)
T 3e23_A 8 AFDDDTLRFYRGNATAYAERQPR--------------------SATLTKFLGE--LPAGAKILELGCGAGYQAEAMLAA- 64 (211)
T ss_dssp CSCHHHHHHHHHSHHHHTTCCCC--------------------CHHHHHHHTT--SCTTCEEEESSCTTSHHHHHHHHT-
T ss_pred cccHHHHHHHHHHHHHHhhccch--------------------hHHHHHHHHh--cCCCCcEEEECCCCCHHHHHHHHc-
Confidence 34456667777666555433221 1233444443 346889999999999999999987
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcccccccc--cHHHHHHHHHhccccCeeE
Q 022810 86 SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFEHMK--NYQNLLKKISKWMKEDTLL 163 (291)
Q Consensus 86 p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l 163 (291)
+.+|+|+|+|+.+++.++++. ++.++.+|+..++..++||+|++..++++++ +...+++++.++|||||++
T Consensus 65 -~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l 137 (211)
T 3e23_A 65 -GFDVDATDGSPELAAEASRRL------GRPVRTMLFHQLDAIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLF 137 (211)
T ss_dssp -TCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGCCCCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEE
T ss_pred -CCeEEEECCCHHHHHHHHHhc------CCceEEeeeccCCCCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEE
Confidence 789999999999999998876 4667889998887558999999999999997 7889999999999999999
Q ss_pred EEEeecc
Q 022810 164 FVHHFCH 170 (291)
Q Consensus 164 ~i~~~~~ 170 (291)
++..+..
T Consensus 138 ~~~~~~~ 144 (211)
T 3e23_A 138 YASYKSG 144 (211)
T ss_dssp EEEEECC
T ss_pred EEEEcCC
Confidence 9986543
No 45
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.75 E-value=7.5e-18 Score=144.54 Aligned_cols=113 Identities=24% Similarity=0.327 Sum_probs=99.3
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCcc
Q 022810 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYD 132 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D 132 (291)
..+++.+...++.+|||||||+|.++..+++ ++.+|+|+|+|+.+++.++++. +++.++.+|+.+++.+++||
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~fD 119 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNFRVDKPLD 119 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCCSSCEE
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCcCCCcC
Confidence 3455566677889999999999999999998 4889999999999999988764 37889999999877668999
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022810 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 133 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 172 (291)
+|++..+++++++...+++++.++|||||++++..+....
T Consensus 120 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~ 159 (279)
T 3ccf_A 120 AVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGN 159 (279)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTT
T ss_pred EEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcc
Confidence 9999999999999999999999999999999998876543
No 46
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.75 E-value=2.1e-17 Score=143.21 Aligned_cols=108 Identities=19% Similarity=0.278 Sum_probs=96.0
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHh-C-CCCeEEEEccccCCccC-------CC
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVL-E-LQNVEIIVADISTFEME-------AS 130 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~-p~~~v~~vD~s~~~~~~a~~~~~~~-~-~~~i~~~~~d~~~~~~~-------~~ 130 (291)
..++.+|||||||+|..+..+++.+ ++.+|+|+|+|+.+++.|++++... + .++++++++|+.+++.. ++
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 3578999999999999999999876 7899999999999999999998876 2 35899999999987643 48
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
||+|++..+++++ +...+++++.++|+|||.+++....
T Consensus 114 fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 114 IDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp EEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 9999999999999 9999999999999999999885544
No 47
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.75 E-value=7.9e-19 Score=145.43 Aligned_cols=198 Identities=16% Similarity=0.166 Sum_probs=132.2
Q ss_pred chhHHHhhcCCChHHHHHhhCCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC
Q 022810 7 TDKAKEQHYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS 86 (291)
Q Consensus 7 ~~~~~~~~yd~~~~~y~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p 86 (291)
.+..+..+||...+.|......... ..........+++.+...++.+|||||||+|.++..+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-- 73 (227)
T 3e8s_A 9 PEDALLDSWHQNAQAWIDAVRHGAI-------------ESRRQVTDQAILLAILGRQPERVLDLGCGEGWLLRALADR-- 73 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCC-------------HHHHHTHHHHHHHHHHHTCCSEEEEETCTTCHHHHHHHTT--
T ss_pred HHHHHHHHHHhhHHHHHHHhccccc-------------ccccccccHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHC--
Confidence 4466778888766666654322111 1111112233444444456789999999999999999987
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC---ccC--CCccEEEEcccccccccHHHHHHHHHhccccCe
Q 022810 87 NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF---EME--ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDT 161 (291)
Q Consensus 87 ~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~---~~~--~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG 161 (291)
+.+|+|+|+|+.+++.++++ .++.+..+|+.++ +.. .+||+|++..+++ ..+...+++++.++|+|||
T Consensus 74 ~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG 146 (227)
T 3e8s_A 74 GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-HQDIIELLSAMRTLLVPGG 146 (227)
T ss_dssp TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEE
T ss_pred CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhcccccccCCCccEEEECchhh-hhhHHHHHHHHHHHhCCCe
Confidence 78999999999999988876 2677888888776 322 5699999999998 8889999999999999999
Q ss_pred eEEEEeeccCCcccccccCCccchhhhhccCCCCCCcHHHHHHhhcCcEEEEeeecCCCcHHHHHHHHHHHHHhcHHhHh
Q 022810 162 LLFVHHFCHKTFAYHFEDTNDDDWITKYFFTGGTMPSANLLLYFQDDVSVVDHWLVNGKHYAQTSEEWLKRMDNNLASIK 241 (291)
Q Consensus 162 ~l~i~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~w~~~l~~~~~~~~ 241 (291)
++++.+++........ -...|....+..- . .... ....+..+..+|.+.|.++||++.
T Consensus 147 ~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~---------~~~~-------~~~~~~~~~~~~~~~l~~aGf~~~ 204 (227)
T 3e8s_A 147 ALVIQTLHPWSVADGD---YQDGWREESFAGF---A---------GDWQ-------PMPWYFRTLASWLNALDMAGLRLV 204 (227)
T ss_dssp EEEEEECCTTTTCTTC---CSCEEEEECCTTS---S---------SCCC-------CEEEEECCHHHHHHHHHHTTEEEE
T ss_pred EEEEEecCccccCccc---cccccchhhhhcc---c---------cCcc-------cceEEEecHHHHHHHHHHcCCeEE
Confidence 9999988765432210 0122222110000 0 0000 001123478899999999999988
Q ss_pred hhHHhcc
Q 022810 242 PIMESTY 248 (291)
Q Consensus 242 ~~~~~~~ 248 (291)
+..++..
T Consensus 205 ~~~~~~~ 211 (227)
T 3e8s_A 205 SLQEPQH 211 (227)
T ss_dssp EEECCCC
T ss_pred EEecCCC
Confidence 7654333
No 48
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.75 E-value=1.6e-17 Score=132.59 Aligned_cols=115 Identities=13% Similarity=0.078 Sum_probs=97.8
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCC-ccC
Q 022810 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTF-EME 128 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~-~~~ 128 (291)
....+++.+...++.+|||+|||+|.++..+++.+|+.+|+++|+|+.+++.+++++...+.+ ++ ++.+|..+. +..
T Consensus 13 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~ 91 (178)
T 3hm2_A 13 VRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV 91 (178)
T ss_dssp HHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC
T ss_pred HHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc
Confidence 345566677788899999999999999999999888899999999999999999999988885 78 888888553 322
Q ss_pred -CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 129 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 129 -~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
++||+|++..++++ ..+++++.+.|+|||.+++..+..
T Consensus 92 ~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 92 PDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp CSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSH
T ss_pred CCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeecc
Confidence 78999999998876 678999999999999999877644
No 49
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.75 E-value=2e-17 Score=139.53 Aligned_cols=142 Identities=15% Similarity=0.342 Sum_probs=110.7
Q ss_pred hhcCCChHHHHHhhCCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEE
Q 022810 13 QHYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITG 92 (291)
Q Consensus 13 ~~yd~~~~~y~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~ 92 (291)
..|+..+++|+.++.... ... ......+..++......++.+|||+|||+|..+..+++. +.+|+|
T Consensus 3 ~~y~~~a~~yd~~~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~--~~~v~g 68 (252)
T 1wzn_A 3 ELYTLLAEYYDTIYRRRI-----------ERV-KAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER--GYEVVG 68 (252)
T ss_dssp GGGTTTGGGHHHHTHHHH-----------HTH-HHHHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT--TCEEEE
T ss_pred hHHHHHHHHHHHHHhcch-----------hhh-HHHHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC--CCeEEE
Confidence 467777777776532100 011 122345566666666667889999999999999999987 789999
Q ss_pred EcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcc-ccccc--ccHHHHHHHHHhccccCeeEEEEeec
Q 022810 93 ICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIE-MFEHM--KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 93 vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~-~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+|+|+.+++.++++....+. ++.++++|+.+.+.+++||+|++.. .+++. ++...+++++.++|+|||.+++..++
T Consensus 69 vD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 69 LDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp EESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EECCHHHHHHHHHHHHhcCC-ceEEEECChhhcccCCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 99999999999999988776 7999999999877668899999864 34443 46788999999999999999987765
No 50
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.75 E-value=9.5e-18 Score=144.75 Aligned_cols=114 Identities=21% Similarity=0.289 Sum_probs=96.9
Q ss_pred HHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC----CCeEEEEccccCCc---c
Q 022810 55 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL----QNVEIIVADISTFE---M 127 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~----~~i~~~~~d~~~~~---~ 127 (291)
+.+.+...++.+|||||||+|..+..+++. +.+|+|+|+|+.+++.|+++....+. .++.+..+|+..++ .
T Consensus 49 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 126 (293)
T 3thr_A 49 LLGLLRQHGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVP 126 (293)
T ss_dssp HHHHHHHTTCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSC
T ss_pred HHHHhcccCCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccc
Confidence 333334456789999999999999999987 67999999999999999988754332 36889999998876 4
Q ss_pred C-CCccEEEEc-cccccccc-------HHHHHHHHHhccccCeeEEEEeecc
Q 022810 128 E-ASYDRIYSI-EMFEHMKN-------YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 128 ~-~~~D~v~~~-~~l~~~~~-------~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+ ++||+|++. .+++|+++ ...+++++.++|||||++++..++.
T Consensus 127 ~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 127 AGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp CTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred cCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 4 899999998 89999988 9999999999999999999988764
No 51
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.75 E-value=6.6e-18 Score=141.52 Aligned_cols=106 Identities=23% Similarity=0.328 Sum_probs=94.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 140 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~~~l 140 (291)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++. ...++.++++|+.+++.+ ++||+|++..++
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 126 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLPFENEQFEAIMAINSL 126 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCSSCTTCEEEEEEESCT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCCCCCCCccEEEEcChH
Confidence 47789999999999999999987 789999999999999888764 224799999999988765 899999999999
Q ss_pred cccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022810 141 EHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 172 (291)
+|+++...+++++.++|+|||++++.++....
T Consensus 127 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 158 (242)
T 3l8d_A 127 EWTEEPLRALNEIKRVLKSDGYACIAILGPTA 158 (242)
T ss_dssp TSSSCHHHHHHHHHHHEEEEEEEEEEEECTTC
T ss_pred hhccCHHHHHHHHHHHhCCCeEEEEEEcCCcc
Confidence 99999999999999999999999998876543
No 52
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.75 E-value=1.8e-17 Score=142.58 Aligned_cols=105 Identities=22% Similarity=0.356 Sum_probs=95.0
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccccc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFE 141 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~l~ 141 (291)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ +++++++|+.+.+..++||+|+++.+++
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANIQENYDFIVSTVVFM 195 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCCCSCEEEEEECSSGG
T ss_pred cCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccccCCccEEEEccchh
Confidence 36889999999999999999987 77999999999999999999998888 8999999999876668999999999999
Q ss_pred cc--ccHHHHHHHHHhccccCeeEEEEeec
Q 022810 142 HM--KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 142 ~~--~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
++ ++...+++++.++|+|||.+++....
T Consensus 196 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 196 FLNRERVPSIIKNMKEHTNVGGYNLIVAAM 225 (286)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred hCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 98 45679999999999999998776543
No 53
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.74 E-value=1e-18 Score=146.35 Aligned_cols=157 Identities=10% Similarity=0.028 Sum_probs=109.9
Q ss_pred hHHHhhcCCChHHHHHhhCCCCCccc--c-ccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC
Q 022810 9 KAKEQHYELPTSFFKLVLGKYFKYSC--C-YFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY 85 (291)
Q Consensus 9 ~~~~~~yd~~~~~y~~~~~~~~~y~~--~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~ 85 (291)
+..+-+|+..+++...|......|.. . +.......+.......+..+...+ ..++.+|||||||+|.++..+++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~Yd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~~ 82 (236)
T 1zx0_A 4 PSATPIFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAP 82 (236)
T ss_dssp ----CCSCTTCBCHHHHTTSCEEECTTSCEEEETTEEEEEGGGHHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHHTSC
T ss_pred CCCCCccCCcCCCchhhhcchhhcCCccchhhccchHHHHHHHHHHHHHHHhhc-CCCCCeEEEEeccCCHHHHHHHhcC
Confidence 44556888888998888877666642 1 111111122222233334444433 4578899999999999999997653
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC--ccC-CCccEEEE-cccc----cccccHHHHHHHHHhcc
Q 022810 86 SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF--EME-ASYDRIYS-IEMF----EHMKNYQNLLKKISKWM 157 (291)
Q Consensus 86 p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~--~~~-~~~D~v~~-~~~l----~~~~~~~~~l~~~~~~L 157 (291)
..+|+|+|+|+.+++.|+++....+ .++.++++|+.+. +.+ ++||+|++ ...+ .+..+...++++++++|
T Consensus 83 -~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~L 160 (236)
T 1zx0_A 83 -IDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLL 160 (236)
T ss_dssp -EEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHE
T ss_pred -CCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhc
Confidence 3589999999999999999887666 3799999999887 555 78999999 4433 12234557899999999
Q ss_pred ccCeeEEEEee
Q 022810 158 KEDTLLFVHHF 168 (291)
Q Consensus 158 ~pgG~l~i~~~ 168 (291)
||||++++...
T Consensus 161 kpgG~l~~~~~ 171 (236)
T 1zx0_A 161 KPGGVLTYCNL 171 (236)
T ss_dssp EEEEEEEECCH
T ss_pred CCCeEEEEEec
Confidence 99999987544
No 54
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.74 E-value=1.4e-17 Score=132.12 Aligned_cols=108 Identities=19% Similarity=0.276 Sum_probs=93.1
Q ss_pred HHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccE
Q 022810 55 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDR 133 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~ 133 (291)
+++.+...++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++ .+++++..+| .+.+ ++||+
T Consensus 9 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d---~~~~~~~~D~ 78 (170)
T 3i9f_A 9 YLPNIFEGKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEK-----FDSVITLSDP---KEIPDNSVDF 78 (170)
T ss_dssp THHHHHSSCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHH-----CTTSEEESSG---GGSCTTCEEE
T ss_pred HHHhcCcCCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC---CCCCCCceEE
Confidence 3444456788899999999999999999884 4999999999999998877 3479999999 3333 78999
Q ss_pred EEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022810 134 IYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 134 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 172 (291)
|++..+++++++...+++++.++|+|||++++..+....
T Consensus 79 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 117 (170)
T 3i9f_A 79 ILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKEN 117 (170)
T ss_dssp EEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred EEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccc
Confidence 999999999999999999999999999999998876543
No 55
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.74 E-value=1.4e-17 Score=140.60 Aligned_cols=121 Identities=15% Similarity=0.174 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC
Q 022810 46 DAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF 125 (291)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~ 125 (291)
.........+++.+...++.+|||||||+|.++..+++.. ..+|+++|+|+.+++.+++++... .++.++++|+.++
T Consensus 76 ~~~~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~ 152 (254)
T 1xtp_A 76 DVDIEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETA 152 (254)
T ss_dssp HHHHHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGC
T ss_pred HHHHHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHC
Confidence 3444555677777777788999999999999999999875 568999999999999999877544 4799999999987
Q ss_pred ccC-CCccEEEEccccccc--ccHHHHHHHHHhccccCeeEEEEeec
Q 022810 126 EME-ASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 126 ~~~-~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+.+ ++||+|++..+++++ ++...+++++.++|||||++++.++.
T Consensus 153 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 199 (254)
T 1xtp_A 153 TLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENC 199 (254)
T ss_dssp CCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 765 789999999999999 56889999999999999999998763
No 56
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.74 E-value=3.6e-17 Score=131.97 Aligned_cols=117 Identities=15% Similarity=0.314 Sum_probs=102.3
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCC--eEEEEccccCCccCC
Q 022810 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQN--VEIIVADISTFEMEA 129 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~--i~~~~~d~~~~~~~~ 129 (291)
...+++.+...++.+|||+|||+|.++..+++. +.+++++|+++.+++.+++++...++++ ++++.+|+.+....+
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDR 118 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTS
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccC
Confidence 445666677778899999999999999999987 7899999999999999999999888865 999999998854447
Q ss_pred CccEEEEcccccc-cccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 130 SYDRIYSIEMFEH-MKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 130 ~~D~v~~~~~l~~-~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+||+|+++.++++ ..+...+++++.++|+|||.+++..+..
T Consensus 119 ~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 119 KYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp CEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred CceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 8999999998877 4677899999999999999999987754
No 57
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.74 E-value=2e-17 Score=140.28 Aligned_cols=104 Identities=13% Similarity=0.247 Sum_probs=94.0
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcc
Q 022810 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIE 138 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~~ 138 (291)
.+.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.+++++ ..+.+++.++.+|+.+++.+ ++||+|++..
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 112 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPLPDESVHGVIVVH 112 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCSCTTCEEEEEEES
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCCCCCCeeEEEECC
Confidence 4567889999999999999999987 789999999999999999887 33345899999999988765 7899999999
Q ss_pred cccccccHHHHHHHHHhccccCeeEEEE
Q 022810 139 MFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 139 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+++++++...+++++.++|+|||.+++.
T Consensus 113 ~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 113 LWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 9999999999999999999999999887
No 58
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.74 E-value=7.3e-18 Score=140.87 Aligned_cols=116 Identities=17% Similarity=0.185 Sum_probs=98.1
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCC
Q 022810 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~~~ 130 (291)
+..++.....++ .+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++....+. .+++++++|+.+.+..++
T Consensus 56 l~~~~~~~~~~~-~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 132 (235)
T 3lcc_A 56 IVHLVDTSSLPL-GRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTEL 132 (235)
T ss_dssp HHHHHHTTCSCC-EEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSC
T ss_pred HHHHHHhcCCCC-CCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCC
Confidence 334444444444 59999999999999999864 78999999999999999998876433 479999999999776689
Q ss_pred ccEEEEcccccccc--cHHHHHHHHHhccccCeeEEEEeecc
Q 022810 131 YDRIYSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 131 ~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
||+|++..++++++ +...+++++.++|+|||++++..+..
T Consensus 133 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 133 FDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp EEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred eeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 99999999999997 88999999999999999999876644
No 59
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.74 E-value=3.7e-17 Score=135.55 Aligned_cols=120 Identities=19% Similarity=0.273 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC
Q 022810 46 DAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF 125 (291)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~ 125 (291)
.......+.+.+.+ .++.+|||+|||+|..+..+++.. .+++++|+|+.+++.++++....+ .+++++++|+.+.
T Consensus 23 ~~~~~~~~~l~~~~--~~~~~vLDlG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~ 97 (227)
T 1ve3_A 23 SRIETLEPLLMKYM--KKRGKVLDLACGVGGFSFLLEDYG--FEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKL 97 (227)
T ss_dssp HHHHHHHHHHHHSC--CSCCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSC
T ss_pred HHHHHHHHHHHHhc--CCCCeEEEEeccCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcC
Confidence 33344445554443 347899999999999999999884 499999999999999999988776 4899999999987
Q ss_pred ccC-CCccEEEEccc--ccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 126 EME-ASYDRIYSIEM--FEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 126 ~~~-~~~D~v~~~~~--l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+.+ ++||+|+++.+ +++.++...+++++.++|+|||.+++..++.
T Consensus 98 ~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 98 SFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp CSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 655 78999999999 6666788899999999999999999988764
No 60
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.74 E-value=3.2e-17 Score=141.52 Aligned_cols=109 Identities=17% Similarity=0.190 Sum_probs=95.8
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCcc--CCCccEEEEc
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM--EASYDRIYSI 137 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~--~~~~D~v~~~ 137 (291)
+.++.+|||||||+|..+..+++. +..+|+|+|+|+.+++.|+++....+. .++.++++|+.+.+. +++||+|++.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEEC
Confidence 467889999999999999998877 245999999999999999999887766 479999999998765 3789999999
Q ss_pred ccccc----cccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 138 EMFEH----MKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 138 ~~l~~----~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
.++++ .++...+++++.++|+|||.+++.+++.
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 99976 4678899999999999999999988765
No 61
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.74 E-value=9.8e-18 Score=137.70 Aligned_cols=107 Identities=14% Similarity=0.149 Sum_probs=92.3
Q ss_pred HHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCc
Q 022810 54 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASY 131 (291)
Q Consensus 54 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~ 131 (291)
.++..+.. ++.+|||+|||+|..+..+ +. +++|+|+|+.+++.++++. +++.++++|+.+++.+ ++|
T Consensus 28 ~~l~~~~~-~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~f 96 (211)
T 2gs9_A 28 RALKGLLP-PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPFPGESF 96 (211)
T ss_dssp HHHHTTCC-CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCSCSSCE
T ss_pred HHHHHhcC-CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCCCCCcE
Confidence 34444433 7889999999999998877 44 9999999999999988765 3789999999988765 789
Q ss_pred cEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022810 132 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 132 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
|+|++..+++|+++...+++++.++|||||.+++.+++..
T Consensus 97 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 97 DVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp EEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 9999999999999999999999999999999999887654
No 62
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.73 E-value=1.2e-17 Score=141.82 Aligned_cols=114 Identities=16% Similarity=0.250 Sum_probs=99.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~- 128 (291)
...+.+++.+...++.+|||||||+|..+..+++ ++.+|+|+|+|+.+++.++++. +++++++|+.+++.+
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~~~~ 92 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLALPD 92 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSCCSCT
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhCCCCC
Confidence 3456666777778899999999999999999997 4899999999999887765432 799999999998766
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022810 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 172 (291)
++||+|++..+++|+++...+++++.++|| ||.+++.++....
T Consensus 93 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~ 135 (261)
T 3ege_A 93 KSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRL 135 (261)
T ss_dssp TCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGG
T ss_pred CCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCch
Confidence 899999999999999999999999999999 9998888876543
No 63
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.73 E-value=8.5e-17 Score=131.72 Aligned_cols=111 Identities=14% Similarity=0.148 Sum_probs=96.2
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC-CC
Q 022810 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-AS 130 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~-~~ 130 (291)
..++..+...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++++..+++ +++++.+|+.+.... .+
T Consensus 45 ~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~ 122 (204)
T 3njr_A 45 ALTLAALAPRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPL 122 (204)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCC
T ss_pred HHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCC
Confidence 34566677888999999999999999999987 889999999999999999999999886 899999999884333 68
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
||+|++...+ +.. +++++.+.|+|||++++.....
T Consensus 123 ~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 123 PEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTL 157 (204)
T ss_dssp CSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSH
T ss_pred CCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCc
Confidence 9999988754 456 9999999999999999987643
No 64
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.73 E-value=4.8e-17 Score=133.48 Aligned_cols=112 Identities=18% Similarity=0.120 Sum_probs=99.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~- 128 (291)
.....+++.+...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++...++++++++.+|+.+....
T Consensus 64 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 141 (210)
T 3lbf_A 64 YMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQAR 141 (210)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccC
Confidence 44556677778889999999999999999999988 789999999999999999999998887899999999886544
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
++||+|+++.+++++++ .+.+.|+|||++++..+.
T Consensus 142 ~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred CCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 78999999999998875 578999999999998776
No 65
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.73 E-value=7.7e-17 Score=135.03 Aligned_cols=134 Identities=19% Similarity=0.341 Sum_probs=105.8
Q ss_pred hcCCChHHHHHhhCCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEE
Q 022810 14 HYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGI 93 (291)
Q Consensus 14 ~yd~~~~~y~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~v 93 (291)
.||..++.|+..... ..| ......+.+.+ .++.+|||+|||+|.++..+++. .+++|+
T Consensus 3 ~y~~~a~~yd~~~~~-~~~----------------~~~~~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~---~~v~~v 60 (243)
T 3d2l_A 3 AYEQFAYVYDELMQD-VPY----------------PEWVAWVLEQV--EPGKRIADIGCGTGTATLLLADH---YEVTGV 60 (243)
T ss_dssp ---CTTHHHHHHTTT-CCH----------------HHHHHHHHHHS--CTTCEEEEESCTTCHHHHHHTTT---SEEEEE
T ss_pred hHHHHHHHHHHhhhc-ccH----------------HHHHHHHHHHc--CCCCeEEEecCCCCHHHHHHhhC---CeEEEE
Confidence 578788888876532 112 23334444443 35689999999999999998865 799999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcc-ccccc---ccHHHHHHHHHhccccCeeEEEEeec
Q 022810 94 CNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIE-MFEHM---KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 94 D~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~-~l~~~---~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
|+|+.+++.++++....+. +++++++|+.+.+.+++||+|++.. +++|+ .+...+++++.++|+|||.+++..++
T Consensus 61 D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 61 DLSEEMLEIAQEKAMETNR-HVDFWVQDMRELELPEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp ESCHHHHHHHHHHHHHTTC-CCEEEECCGGGCCCSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ECCHHHHHHHHHhhhhcCC-ceEEEEcChhhcCCCCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 9999999999999887664 7999999998876668899999986 88888 56778999999999999999997765
Q ss_pred c
Q 022810 170 H 170 (291)
Q Consensus 170 ~ 170 (291)
+
T Consensus 140 ~ 140 (243)
T 3d2l_A 140 P 140 (243)
T ss_dssp H
T ss_pred H
Confidence 4
No 66
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.73 E-value=4.4e-17 Score=131.07 Aligned_cols=108 Identities=14% Similarity=0.140 Sum_probs=89.3
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--cCCCccEEEEc
Q 022810 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--MEASYDRIYSI 137 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~--~~~~~D~v~~~ 137 (291)
.+.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|++++...+++++++++.+...+. .+++||+|+++
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 4567899999999999999999987 8899999999999999999999988878999998887743 23789999987
Q ss_pred cc-ccc--------cccHHHHHHHHHhccccCeeEEEEeec
Q 022810 138 EM-FEH--------MKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 138 ~~-l~~--------~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
.. +.+ ..+...+++++.++|||||.+++..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 97 LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 42 221 144567889999999999999887653
No 67
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.73 E-value=2.4e-17 Score=138.14 Aligned_cols=112 Identities=13% Similarity=0.208 Sum_probs=97.2
Q ss_pred HHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCc
Q 022810 54 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASY 131 (291)
Q Consensus 54 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~ 131 (291)
.+...+...++.+|||||||+|..+..+++. +. +|+|+|+|+.+++.++++... .++.++++|+.+.+.+ ++|
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~~~~~~f 108 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLHLPQDSF 108 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCCCCTTCE
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhccCCCCCc
Confidence 3445566668899999999999999999987 55 999999999999998876532 3689999999987765 789
Q ss_pred cEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 132 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 132 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
|+|++..+++++++...+++++.++|+|||++++.++++
T Consensus 109 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 147 (243)
T 3bkw_A 109 DLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHP 147 (243)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred eEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCc
Confidence 999999999999999999999999999999999988654
No 68
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.73 E-value=1.7e-17 Score=143.76 Aligned_cols=119 Identities=11% Similarity=0.229 Sum_probs=99.4
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC---CCeEEEEccccCCcc
Q 022810 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL---QNVEIIVADISTFEM 127 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~---~~i~~~~~d~~~~~~ 127 (291)
....+++.+...++ +|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...+. .+++++++|+.+++.
T Consensus 71 ~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 147 (299)
T 3g2m_A 71 EAREFATRTGPVSG-PVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL 147 (299)
T ss_dssp HHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC
T ss_pred HHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc
Confidence 34455555554444 9999999999999999987 78999999999999999999887663 479999999999877
Q ss_pred CCCccEEEEc-ccccccc--cHHHHHHHHHhccccCeeEEEEeeccCC
Q 022810 128 EASYDRIYSI-EMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 128 ~~~~D~v~~~-~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 172 (291)
+++||+|++. .++++++ +...+++++.++|+|||+|++.+++...
T Consensus 148 ~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 195 (299)
T 3g2m_A 148 DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEA 195 (299)
T ss_dssp SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHH
T ss_pred CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCcc
Confidence 7899999865 5676664 4688999999999999999999887653
No 69
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.73 E-value=4.9e-17 Score=139.33 Aligned_cols=118 Identities=17% Similarity=0.311 Sum_probs=99.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~ 128 (291)
..+++.+++.+. .++.+|||+|||+|..+..+++..|+.+|+++|+|+.+++.+++++...++++++++++|+.+....
T Consensus 96 e~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~ 174 (276)
T 2b3t_A 96 ECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAG 174 (276)
T ss_dssp HHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTT
T ss_pred HHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhccc
Confidence 445566666665 5678999999999999999999888899999999999999999999998887899999999875334
Q ss_pred CCccEEEEccccccc-------------------------ccHHHHHHHHHhccccCeeEEEEe
Q 022810 129 ASYDRIYSIEMFEHM-------------------------KNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~-------------------------~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
++||+|++++++... .....+++.+.+.|+|||++++..
T Consensus 175 ~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 175 QQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp CCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 789999999655332 245778999999999999999864
No 70
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.73 E-value=1.4e-17 Score=144.68 Aligned_cols=113 Identities=17% Similarity=0.201 Sum_probs=99.4
Q ss_pred CCCCCCEEEEEcCCcchHHHHHH-HHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCCccEEEEc
Q 022810 60 RLEDGHTVLDVGCGWGSLSLYIA-QKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSI 137 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~l~-~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~~~~D~v~~~ 137 (291)
.+.++.+|||||||+|..+..++ ...|+.+|+|+|+|+.+++.+++++...++. +++++++|+.+.+.+++||+|+++
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~ 194 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSN 194 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECC
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEEC
Confidence 35678999999999999999986 4567889999999999999999999887774 599999999998766899999999
Q ss_pred ccccccccHHH---HHHHHHhccccCeeEEEEeeccCC
Q 022810 138 EMFEHMKNYQN---LLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 138 ~~l~~~~~~~~---~l~~~~~~L~pgG~l~i~~~~~~~ 172 (291)
.+++++++... +++++.++|||||++++.++....
T Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 232 (305)
T 3ocj_A 195 GLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPP 232 (305)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCT
T ss_pred ChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCC
Confidence 99999977665 799999999999999998766543
No 71
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.72 E-value=3.5e-17 Score=134.06 Aligned_cols=110 Identities=25% Similarity=0.278 Sum_probs=94.8
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEccc
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEM 139 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~~~ 139 (291)
..++.+|||+|||+|..+..++.. ++.+|+|+|+|+.+++.+++++...+. ++.++++|+.+.+.+ ++||+|++..+
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNF-KLNISKGDIRKLPFKDESMSFVYSYGT 98 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTC-CCCEEECCTTSCCSCTTCEEEEEECSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEECchhhCCCCCCceeEEEEcCh
Confidence 346789999999999985544434 378999999999999999999887764 789999999987765 78999999999
Q ss_pred cccc--ccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022810 140 FEHM--KNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 140 l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 172 (291)
++|+ ++...+++++.++|+|||.+++..++...
T Consensus 99 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 133 (209)
T 2p8j_A 99 IFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKD 133 (209)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTS
T ss_pred HHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccc
Confidence 9999 78899999999999999999998887654
No 72
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.72 E-value=7.4e-17 Score=132.93 Aligned_cols=107 Identities=19% Similarity=0.274 Sum_probs=93.1
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--cC-CCccEEEEcc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--ME-ASYDRIYSIE 138 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~--~~-~~~D~v~~~~ 138 (291)
.++.+|||||||+|.++..+++..|+.+++|+|+|+.+++.|++++...+++++.++++|+.+++ .+ ++||+|+++.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 35789999999999999999999988999999999999999999999988888999999998865 33 7899999997
Q ss_pred cccccc--------cHHHHHHHHHhccccCeeEEEEee
Q 022810 139 MFEHMK--------NYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 139 ~l~~~~--------~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
+..+.. ....+++.+.++|+|||.+++.+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 654332 236799999999999999998653
No 73
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.72 E-value=4.7e-17 Score=135.48 Aligned_cols=108 Identities=23% Similarity=0.431 Sum_probs=96.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-----CCeEEEEccccCCccC-CCccEEE
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-----QNVEIIVADISTFEME-ASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~i~~~~~d~~~~~~~-~~~D~v~ 135 (291)
+++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.++++....++ +++.++.+|+..++.+ ++||+|+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 47889999999999999999987 78999999999999999998876665 2589999999988765 8899999
Q ss_pred EcccccccccHH---HHHHHHHhccccCeeEEEEeeccC
Q 022810 136 SIEMFEHMKNYQ---NLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 136 ~~~~l~~~~~~~---~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
+..+++++++.. .+++++.++|+|||++++.++...
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 999999998877 899999999999999999887653
No 74
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.71 E-value=4.1e-17 Score=140.91 Aligned_cols=109 Identities=19% Similarity=0.234 Sum_probs=87.0
Q ss_pred CCCCEEEEEcCCcchHHHH----HHHHCCCCEE--EEEcCCHHHHHHHHHHHHHh-CCCCeE--EEEccccCCc------
Q 022810 62 EDGHTVLDVGCGWGSLSLY----IAQKYSNCKI--TGICNSKTQKEFIEEQCRVL-ELQNVE--IIVADISTFE------ 126 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~----l~~~~p~~~v--~~vD~s~~~~~~a~~~~~~~-~~~~i~--~~~~d~~~~~------ 126 (291)
.++.+|||||||+|..+.. ++..+|+..| +++|+|+.|++.|++++... +++++. +..++++++.
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 5678999999999976653 3445566754 99999999999999988653 444554 4566665543
Q ss_pred c-CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 127 M-EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 127 ~-~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
. +++||+|++..+++|++|+..++++++++|||||++++.....
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 2 3789999999999999999999999999999999999986543
No 75
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.71 E-value=3.2e-17 Score=139.28 Aligned_cols=139 Identities=15% Similarity=0.250 Sum_probs=105.5
Q ss_pred HHhhcC-CChHHHHHhhCCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCE
Q 022810 11 KEQHYE-LPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCK 89 (291)
Q Consensus 11 ~~~~yd-~~~~~y~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~ 89 (291)
.+..|+ ..+++|+.+.... ..........+.+.+...+ .++.+|||||||+|.++..+++. +.+
T Consensus 10 ~~~~y~~~~a~~yd~~~~~~-----------~~~~~~~~~~~~~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~--~~~ 74 (263)
T 3pfg_A 10 PQADYSGEIAELYDLVHQGK-----------GKDYHREAADLAALVRRHS--PKAASLLDVACGTGMHLRHLADS--FGT 74 (263)
T ss_dssp CBCSCCHHHHHHHHHHHHHT-----------TCCHHHHHHHHHHHHHHHC--TTCCEEEEETCTTSHHHHHHTTT--SSE
T ss_pred cccccchhHHHHHHHHhhcC-----------CCCHHHHHHHHHHHHHhhC--CCCCcEEEeCCcCCHHHHHHHHc--CCe
Confidence 345666 6667777665321 0112222233334443332 45689999999999999999987 679
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcc-cccccc---cHHHHHHHHHhccccCeeEEE
Q 022810 90 ITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIE-MFEHMK---NYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 90 v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~-~l~~~~---~~~~~l~~~~~~L~pgG~l~i 165 (291)
|+|+|+|+.+++.|+++. .++.++++|+.+++.+++||+|++.. ++++++ +...+++++.++|+|||.+++
T Consensus 75 v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i 149 (263)
T 3pfg_A 75 VEGLELSADMLAIARRRN-----PDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVV 149 (263)
T ss_dssp EEEEESCHHHHHHHHHHC-----TTSEEEECCTTTCCCSCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEEEECCHHHHHHHHhhC-----CCCEEEECChHHCCccCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 999999999999988764 27899999999987678999999998 999994 667899999999999999999
Q ss_pred Eeec
Q 022810 166 HHFC 169 (291)
Q Consensus 166 ~~~~ 169 (291)
....
T Consensus 150 ~~~~ 153 (263)
T 3pfg_A 150 EPWW 153 (263)
T ss_dssp CCCC
T ss_pred Eecc
Confidence 7543
No 76
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.71 E-value=1.2e-17 Score=132.62 Aligned_cols=112 Identities=13% Similarity=0.250 Sum_probs=93.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~ 128 (291)
.....+...+ .+..+|||||||+|.++..++...|+++|+++|+|+.+++.+++++...|.. ++++ +|......+
T Consensus 38 ~fY~~~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~ 113 (200)
T 3fzg_A 38 DFYTYVFGNI--KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYK 113 (200)
T ss_dssp HHHHHHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTT
T ss_pred HHHHHHHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCC
Confidence 3344444444 4578999999999999999999889999999999999999999999998885 5666 666554445
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEE
Q 022810 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 165 (291)
++||+|++..++|++++.+..+.++.+.|+|||+++-
T Consensus 114 ~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 114 GTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp SEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEE
T ss_pred CCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEE
Confidence 8899999999999997777788899999999998654
No 77
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.71 E-value=3.6e-17 Score=137.24 Aligned_cols=102 Identities=23% Similarity=0.284 Sum_probs=91.1
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----CCCccEEEE
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----EASYDRIYS 136 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----~~~~D~v~~ 136 (291)
+.++.+|||||||+|..+..++...|+.+|+|+|+|+.+++.+++++...++++++++++|+.+++. .++||+|++
T Consensus 68 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 68 FNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred cCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEE
Confidence 3567899999999999999999877789999999999999999999999988789999999987653 378999999
Q ss_pred cccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 137 IEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 137 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
.. +.+...+++.+.++|+|||.+++.
T Consensus 148 ~~----~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 148 RA----VARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp EC----CSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred ec----cCCHHHHHHHHHHhcCCCCEEEEE
Confidence 76 367889999999999999999885
No 78
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.71 E-value=7.2e-17 Score=133.04 Aligned_cols=106 Identities=23% Similarity=0.240 Sum_probs=91.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--cC-CCccEEEEccc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--ME-ASYDRIYSIEM 139 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~--~~-~~~D~v~~~~~ 139 (291)
++.+|||||||+|.++..+++.+|+.+|+|+|+|+.+++.|++++...+++++.++++|+.+++ .+ ++||.|+++.+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 5779999999999999999999989999999999999999999999888888999999998854 33 78999998765
Q ss_pred cccccc--------HHHHHHHHHhccccCeeEEEEee
Q 022810 140 FEHMKN--------YQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 140 l~~~~~--------~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
..+... ...+++.+.++|+|||.+++.+.
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 433321 36799999999999999998763
No 79
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.71 E-value=1.6e-16 Score=135.95 Aligned_cols=151 Identities=11% Similarity=0.099 Sum_probs=112.4
Q ss_pred ChHHHHHhhCCCCCcccc-----ccCC---CCCCHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCc---chHHHHHHHHC
Q 022810 18 PTSFFKLVLGKYFKYSCC-----YFSD---ASKTLEDAEKAMLELYCERSR-LEDGHTVLDVGCGW---GSLSLYIAQKY 85 (291)
Q Consensus 18 ~~~~y~~~~~~~~~y~~~-----~~~~---~~~~l~~~~~~~~~~~~~~~~-~~~~~~vLDiGcG~---G~~~~~l~~~~ 85 (291)
....|+.+++...+|... .+.. ........+...+..+++.+. ..+..+|||||||+ |..+..+++..
T Consensus 23 ~ar~~d~~l~g~~~~~~d~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~ 102 (274)
T 2qe6_A 23 IARVYDALLGGKDNFEADRALADYACKHIPGLKESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVN 102 (274)
T ss_dssp HHHHHHHHTTCSSCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHC
T ss_pred hHHHHHHhcCCccCCHHHHHHHHHHHHhcchhHHHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhC
Confidence 356788888765555210 0100 001123334445555555554 33457999999999 99888888788
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-----------cC-CCccEEEEccccccccc--HHHHHH
Q 022810 86 SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-----------ME-ASYDRIYSIEMFEHMKN--YQNLLK 151 (291)
Q Consensus 86 p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~-----------~~-~~~D~v~~~~~l~~~~~--~~~~l~ 151 (291)
|+.+|+++|+|+.+++.|++++.. .++++++++|+.+.. .+ .+||+|++..++|++++ ...+++
T Consensus 103 p~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~ 180 (274)
T 2qe6_A 103 PDARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVG 180 (274)
T ss_dssp TTCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHH
T ss_pred CCCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHH
Confidence 889999999999999999988743 247999999997632 22 57999999999999976 899999
Q ss_pred HHHhccccCeeEEEEeecc
Q 022810 152 KISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 152 ~~~~~L~pgG~l~i~~~~~ 170 (291)
++.++|+|||+|++.+...
T Consensus 181 ~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 181 AYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHHSCTTCEEEEEEEBC
T ss_pred HHHHhCCCCcEEEEEEecC
Confidence 9999999999999988754
No 80
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.71 E-value=3.9e-16 Score=139.17 Aligned_cols=118 Identities=19% Similarity=0.185 Sum_probs=103.8
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCC
Q 022810 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~~~ 130 (291)
...+++.++..++.+|||+|||+|..+..+++.+|+.+++++|+ +.+++.+++++...++ ++++++.+|+.+ +.+..
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~~p~~ 268 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-TIPDG 268 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-CCCSS
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-CCCCC
Confidence 45666777778889999999999999999999999999999999 9999999999988876 579999999984 33358
Q ss_pred ccEEEEcccccccccHH--HHHHHHHhccccCeeEEEEeeccC
Q 022810 131 YDRIYSIEMFEHMKNYQ--NLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
||+|++..+++++++.. .+++++++.|+|||++++.++..+
T Consensus 269 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 269 ADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred ceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 99999999999997765 799999999999999999876543
No 81
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.71 E-value=2.8e-17 Score=141.96 Aligned_cols=105 Identities=19% Similarity=0.371 Sum_probs=89.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC------------------------------
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL------------------------------ 112 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~------------------------------ 112 (291)
++.+|||||||+|..+..+++.+++.+|+|+|+|+.+++.|++++...+.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 68899999999999999999998889999999999999999987654331
Q ss_pred ----------------------------CCeEEEEccccCCc------cCCCccEEEEcccccccc------cHHHHHHH
Q 022810 113 ----------------------------QNVEIIVADISTFE------MEASYDRIYSIEMFEHMK------NYQNLLKK 152 (291)
Q Consensus 113 ----------------------------~~i~~~~~d~~~~~------~~~~~D~v~~~~~l~~~~------~~~~~l~~ 152 (291)
.+++++++|+.... ..++||+|+|..+++|+. +...++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 37999999998654 237899999999997774 77889999
Q ss_pred HHhccccCeeEEEEe
Q 022810 153 ISKWMKEDTLLFVHH 167 (291)
Q Consensus 153 ~~~~L~pgG~l~i~~ 167 (291)
+.++|+|||+|++..
T Consensus 206 ~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 206 IYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHEEEEEEEEEEC
T ss_pred HHHHhCCCcEEEEec
Confidence 999999999999864
No 82
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.71 E-value=3.1e-16 Score=137.82 Aligned_cols=119 Identities=19% Similarity=0.296 Sum_probs=103.3
Q ss_pred HHHHHHHcCC--CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC
Q 022810 52 LELYCERSRL--EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME 128 (291)
Q Consensus 52 ~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~ 128 (291)
...+++.++. .++.+|||+|||+|..+..+++.+|+.+++++|++ .+++.+++++...++. +++++.+|+.+.+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 230 (335)
T 2r3s_A 152 AQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYG 230 (335)
T ss_dssp HHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCC
T ss_pred HHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCC
Confidence 3455666666 77889999999999999999999988999999999 9999999999888874 699999999886555
Q ss_pred CCccEEEEccccccc--ccHHHHHHHHHhccccCeeEEEEeeccC
Q 022810 129 ASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
..||+|++..+++++ ++...+++++.++|+|||++++.++...
T Consensus 231 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 231 NDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred CCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 569999999999999 4457899999999999999998876543
No 83
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.71 E-value=5.3e-16 Score=129.05 Aligned_cols=108 Identities=17% Similarity=0.234 Sum_probs=91.1
Q ss_pred CCCCCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-cC-CCccEEEE
Q 022810 60 RLEDGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-ME-ASYDRIYS 136 (291)
Q Consensus 60 ~~~~~~~vLDiGcG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~-~~-~~~D~v~~ 136 (291)
.+.++.+|||+||| +|.++..+++.. +.+|+|+|+|+.+++.|++++...++ +++++++|+.... .+ ++||+|++
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~~~fD~I~~ 129 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKGVVEGTFDVIFS 129 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTTTCCSCEEEEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhhcccCceeEEEE
Confidence 35688999999999 999999999886 78999999999999999999999988 8999999975432 22 78999999
Q ss_pred ccccccccc-------------------HHHHHHHHHhccccCeeEEEEeec
Q 022810 137 IEMFEHMKN-------------------YQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 137 ~~~l~~~~~-------------------~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+.++.+..+ ...+++.+.++|+|||++++..+.
T Consensus 130 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 181 (230)
T 3evz_A 130 APPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD 181 (230)
T ss_dssp CCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES
T ss_pred CCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc
Confidence 988765432 478999999999999999997654
No 84
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.70 E-value=1.5e-16 Score=139.77 Aligned_cols=114 Identities=11% Similarity=0.081 Sum_probs=99.1
Q ss_pred HHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCCccE
Q 022810 55 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDR 133 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~~~~D~ 133 (291)
+++.++..+..+|||+|||+|..+..+++.+|+.+++++|+ +.+++.+++++...++ ++++++.+|+.+ +.+.+||+
T Consensus 161 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~p~~~D~ 238 (332)
T 3i53_A 161 IAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-PLPAGAGG 238 (332)
T ss_dssp GGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCCCSCSE
T ss_pred HHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-CCCCCCcE
Confidence 34444556678999999999999999999999999999999 9999999999988887 579999999974 33348999
Q ss_pred EEEcccccccccH--HHHHHHHHhccccCeeEEEEeecc
Q 022810 134 IYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 134 v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
|++..++|++++. ..+++++++.|+|||++++.++..
T Consensus 239 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 239 YVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred EEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 9999999999774 889999999999999999977644
No 85
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.70 E-value=1.6e-16 Score=129.46 Aligned_cols=107 Identities=15% Similarity=0.241 Sum_probs=92.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 140 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~~~l 140 (291)
.++ +|||+|||+|.++..+++. +.+|+++|+|+.+++.++++....+. ++.++++|+.+.+.+ ++||+|++....
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~~ 104 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFDIVADAWEGIVSIFCH 104 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBSCCTTTCSEEEEECCC
T ss_pred CCC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcCCCcCCccEEEEEhhc
Confidence 456 9999999999999999987 77999999999999999999988877 899999999987755 789999996443
Q ss_pred cccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022810 141 EHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 172 (291)
.+..+...+++++.++|+|||.+++.++....
T Consensus 105 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 105 LPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp CCHHHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 33357889999999999999999999886544
No 86
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.70 E-value=1.2e-17 Score=137.99 Aligned_cols=111 Identities=16% Similarity=0.172 Sum_probs=88.1
Q ss_pred HHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH----HHhCCCCeEEEEccccCCccC-CCc
Q 022810 57 ERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQC----RVLELQNVEIIVADISTFEME-ASY 131 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~----~~~~~~~i~~~~~d~~~~~~~-~~~ 131 (291)
+.+...++.+|||+|||+|.++..+++.+|+.+|+|+|+|+.+++.+.+.+ ...+.++++++++|+.+++.. +.
T Consensus 21 ~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~- 99 (218)
T 3mq2_A 21 EQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV- 99 (218)
T ss_dssp HHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-
T ss_pred HHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-
Confidence 334466888999999999999999999998999999999999888644333 235556899999999998766 44
Q ss_pred cEEEEcc---cc--cccccHHHHHHHHHhccccCeeEEEEee
Q 022810 132 DRIYSIE---MF--EHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 132 D~v~~~~---~l--~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
|.|++.. .. +++++...+++++.++|||||.+++...
T Consensus 100 d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 100 GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 7666433 22 2556778999999999999999998554
No 87
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.70 E-value=1.6e-18 Score=145.47 Aligned_cols=103 Identities=15% Similarity=0.169 Sum_probs=92.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCCccEEEEccccc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDRIYSIEMFE 141 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~~~~D~v~~~~~l~ 141 (291)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...++ ++++++++|+.+....++||+|+++.+++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcC
Confidence 6889999999999999999987 68999999999999999999999988 58999999999876558999999999999
Q ss_pred ccccHHHHHHHHHhccccCeeEEEEe
Q 022810 142 HMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 142 ~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
+..+....+.++.++|+|||.+++..
T Consensus 156 ~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 156 GPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CcchhhhHHHHHHhhcCCcceeHHHH
Confidence 98777667888999999999976643
No 88
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.69 E-value=1.8e-16 Score=132.38 Aligned_cols=102 Identities=12% Similarity=0.282 Sum_probs=88.1
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEE-cccc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYS-IEMF 140 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~-~~~l 140 (291)
.++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.++++. +++.++++|+.+.+.+++||+|+| ..++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 111 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF--GDTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFRLGRKFSAVVSMFSSV 111 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH--SEEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCCCSSCEEEEEECTTGG
T ss_pred CCCCeEEEecccCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHcccCCCCcEEEEcCchH
Confidence 567899999999999999999884 49999999999999988763 368999999998766678999996 4488
Q ss_pred ccc---ccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 141 EHM---KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 141 ~~~---~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+|+ ++...+++++.++|+|||.+++..+..
T Consensus 112 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 112 GYLKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp GGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 888 456789999999999999999976554
No 89
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.69 E-value=7.7e-17 Score=131.63 Aligned_cols=107 Identities=20% Similarity=0.278 Sum_probs=91.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC--CCeEEEEccccCCcc---CCC-ccEEEE
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL--QNVEIIVADISTFEM---EAS-YDRIYS 136 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~--~~i~~~~~d~~~~~~---~~~-~D~v~~ 136 (291)
++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|++++...++ ++++++++|+.+... .++ ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 57899999999999999877663 36999999999999999999999887 689999999887532 367 999999
Q ss_pred cccccccccHHHHHHHH--HhccccCeeEEEEeeccC
Q 022810 137 IEMFEHMKNYQNLLKKI--SKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 137 ~~~l~~~~~~~~~l~~~--~~~L~pgG~l~i~~~~~~ 171 (291)
+.+++ ..+...+++.+ .++|+|||.+++......
T Consensus 132 ~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 132 DPPFH-FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 98854 56778888988 668999999999876554
No 90
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.69 E-value=1.5e-16 Score=129.16 Aligned_cols=110 Identities=15% Similarity=0.222 Sum_probs=93.2
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCc--cCCCccEEE
Q 022810 60 RLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFE--MEASYDRIY 135 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~l~~~~-p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~--~~~~~D~v~ 135 (291)
.+.++.+|||+|||+|..+..+++.. |..+|+|+|+++.+++.|++++...++ ++++++++|+.++. .+++||+|+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 45678999999999999999999885 467999999999999999999999887 68999999998874 227899999
Q ss_pred Ecccccc---------cccHHHHHHHHHhccccCeeEEEEeec
Q 022810 136 SIEMFEH---------MKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 136 ~~~~l~~---------~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
++.++.. ..+...+++++.++|+|||++++..+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 9876511 124567999999999999999987654
No 91
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.69 E-value=2.4e-16 Score=139.64 Aligned_cols=117 Identities=10% Similarity=0.092 Sum_probs=102.9
Q ss_pred HHHHHcCCCC-CCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCc--cCC
Q 022810 54 LYCERSRLED-GHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFE--MEA 129 (291)
Q Consensus 54 ~~~~~~~~~~-~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~--~~~ 129 (291)
.+++.++..+ +.+|||||||+|..+..+++.+|+.+++++|+ +.+++.++++....++ ++++++.+|+.+.+ .++
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 247 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGG 247 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCC
Confidence 5556666666 88999999999999999999999999999999 8899999999988877 46999999999876 557
Q ss_pred CccEEEEcccccccccH--HHHHHHHHhccccCeeEEEEeeccC
Q 022810 130 SYDRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 130 ~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
.||+|++..++|++++. ..+++++++.|+|||++++.++..+
T Consensus 248 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 248 AADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMN 291 (352)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCC
T ss_pred CccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 79999999999999754 8899999999999999999876543
No 92
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.69 E-value=1.7e-16 Score=129.82 Aligned_cols=101 Identities=17% Similarity=0.286 Sum_probs=90.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcccccc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFEH 142 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~l~~ 142 (291)
++.+|||+|||+|..+..+++.+|+.+++++|+|+.+++.+++++...++++++++++|+.+....++||+|+++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~---- 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRA---- 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSC----
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEec----
Confidence 4789999999999999999998888999999999999999999999988867999999999876447899999864
Q ss_pred cccHHHHHHHHHhccccCeeEEEEe
Q 022810 143 MKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 143 ~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
+.+...+++.+.++|+|||.+++..
T Consensus 141 ~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 141 FASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp SSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 3567899999999999999998864
No 93
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.69 E-value=1e-16 Score=127.93 Aligned_cols=121 Identities=8% Similarity=0.160 Sum_probs=96.9
Q ss_pred HHHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCC-c-
Q 022810 51 MLELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTF-E- 126 (291)
Q Consensus 51 ~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~-~- 126 (291)
..+.+++.+. ..++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++...++ ++++++.+|+.+. +
T Consensus 18 ~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 96 (177)
T 2esr_A 18 VRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDC 96 (177)
T ss_dssp CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHh
Confidence 3445555554 567889999999999999999977 457999999999999999999998887 3799999999874 2
Q ss_pred cCCCccEEEEcccccccccHHHHHHHHH--hccccCeeEEEEeeccCCc
Q 022810 127 MEASYDRIYSIEMFEHMKNYQNLLKKIS--KWMKEDTLLFVHHFCHKTF 173 (291)
Q Consensus 127 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~--~~L~pgG~l~i~~~~~~~~ 173 (291)
..++||+|+++.+++ .......++.+. ++|+|||++++........
T Consensus 97 ~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~~ 144 (177)
T 2esr_A 97 LTGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVCETDKTVLL 144 (177)
T ss_dssp BCSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEETTCCC
T ss_pred hcCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEEEECCcccc
Confidence 226799999998763 244566777776 9999999999988765543
No 94
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.69 E-value=2.8e-16 Score=140.11 Aligned_cols=116 Identities=11% Similarity=0.156 Sum_probs=96.9
Q ss_pred HHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC---CeEEEEccccCCccCCC
Q 022810 54 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ---NVEIIVADISTFEMEAS 130 (291)
Q Consensus 54 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~---~i~~~~~d~~~~~~~~~ 130 (291)
.+++.+...++.+|||+|||+|.++..+++.+|+.+|+++|+|+.+++.+++++..+++. +++++.+|+.+....++
T Consensus 213 ~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~ 292 (375)
T 4dcm_A 213 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 292 (375)
T ss_dssp HHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTC
T ss_pred HHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCC
Confidence 446666666778999999999999999999998899999999999999999999998863 58899999988543478
Q ss_pred ccEEEEcccccccc-----cHHHHHHHHHhccccCeeEEEEeec
Q 022810 131 YDRIYSIEMFEHMK-----NYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 131 ~D~v~~~~~l~~~~-----~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
||+|+++.++++.. ....+++.+.++|+|||.+++....
T Consensus 293 fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 293 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp EEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred eeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 99999999987532 2346899999999999999997543
No 95
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.69 E-value=1.4e-16 Score=138.12 Aligned_cols=109 Identities=11% Similarity=0.074 Sum_probs=87.5
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC------CeEEEEccc------cCCc--cC
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ------NVEIIVADI------STFE--ME 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~------~i~~~~~d~------~~~~--~~ 128 (291)
++.+|||||||+|..+..++... +.+|+|+|+|+.+++.|+++....+.. ++++.+.|+ .+++ .+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 57899999999998766665542 579999999999999999988776542 267888887 2221 22
Q ss_pred -CCccEEEEccccccc---ccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022810 129 -ASYDRIYSIEMFEHM---KNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 129 -~~~D~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 172 (291)
++||+|+|..+++++ .+...+++++.++|||||++++.+++...
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~ 174 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDK 174 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 789999999999875 46689999999999999999999887543
No 96
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.69 E-value=5.9e-16 Score=137.52 Aligned_cols=119 Identities=16% Similarity=0.209 Sum_probs=104.0
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCC
Q 022810 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEA 129 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~~ 129 (291)
....+++.++..++.+|||||||+|..+..+++.+|+.+++++|+ +.+++.+++++...+++ +++++.+|+.+.+.+.
T Consensus 178 ~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 256 (359)
T 1x19_A 178 AIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE 256 (359)
T ss_dssp HHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC
T ss_pred hHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC
Confidence 345667777778889999999999999999999999899999999 99999999999888774 5999999998875443
Q ss_pred CccEEEEccccccccc--HHHHHHHHHhccccCeeEEEEeeccC
Q 022810 130 SYDRIYSIEMFEHMKN--YQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 130 ~~D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
+|+|++..+++++++ ...+++++.++|+|||++++.++..+
T Consensus 257 -~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 257 -ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp -CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred -CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 499999999999976 78899999999999999988776543
No 97
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.69 E-value=2.4e-16 Score=139.58 Aligned_cols=122 Identities=15% Similarity=0.156 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH-------HHhCC--CCeE
Q 022810 46 DAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQC-------RVLEL--QNVE 116 (291)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~-------~~~~~--~~i~ 116 (291)
+.....+..+++.+.+.++.+|||||||+|.++..++...+..+|+|||+++.+++.|+++. +..++ ++++
T Consensus 156 Et~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVe 235 (438)
T 3uwp_A 156 ETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYT 235 (438)
T ss_dssp GTHHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEE
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeE
Confidence 33456677788888899999999999999999999998875456999999999999998754 33454 4799
Q ss_pred EEEccccCCccC---CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 117 IIVADISTFEME---ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 117 ~~~~d~~~~~~~---~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
++++|+.+.+.. ..+|+|+++.++ +.++....|.++.+.|||||+|++...
T Consensus 236 fi~GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 236 LERGDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp EEECCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred EEECcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeec
Confidence 999999987653 479999998776 457888899999999999999988644
No 98
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.69 E-value=2.6e-16 Score=137.22 Aligned_cols=108 Identities=16% Similarity=0.131 Sum_probs=91.9
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh-------CCCCeEEEEccccCCc----c---
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL-------ELQNVEIIVADISTFE----M--- 127 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~i~~~~~d~~~~~----~--- 127 (291)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.++++.... +..++.++++|+.+.+ .
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 36789999999999999999874 4789999999999999999988764 3347999999998865 3
Q ss_pred CCCccEEEEccccccc----ccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 128 EASYDRIYSIEMFEHM----KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 128 ~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
.++||+|+++.+++++ ++...+++++.++|+|||.+++.+++.
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 2589999999999887 445789999999999999999998865
No 99
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.69 E-value=2.6e-16 Score=126.46 Aligned_cols=121 Identities=14% Similarity=0.140 Sum_probs=97.1
Q ss_pred HHHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCcc-
Q 022810 51 MLELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM- 127 (291)
Q Consensus 51 ~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~- 127 (291)
..+.+++.+. ..++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++...++ ++++++++|+.+...
T Consensus 31 ~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 109 (187)
T 2fhp_A 31 VKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQ 109 (187)
T ss_dssp HHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHH
Confidence 3444445442 357889999999999999998875 357999999999999999999998887 479999999987432
Q ss_pred ----CCCccEEEEcccccccccHHHHHHHH--HhccccCeeEEEEeeccCCc
Q 022810 128 ----EASYDRIYSIEMFEHMKNYQNLLKKI--SKWMKEDTLLFVHHFCHKTF 173 (291)
Q Consensus 128 ----~~~~D~v~~~~~l~~~~~~~~~l~~~--~~~L~pgG~l~i~~~~~~~~ 173 (291)
.++||+|+++.+++ ..+....++.+ .++|+|||++++..+.....
T Consensus 110 ~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~~ 160 (187)
T 2fhp_A 110 FYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTVKL 160 (187)
T ss_dssp HHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTCCC
T ss_pred HHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCcccc
Confidence 37899999998854 45567777777 88899999999988766543
No 100
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.69 E-value=1.6e-16 Score=134.00 Aligned_cols=103 Identities=15% Similarity=0.189 Sum_probs=91.8
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----CCCccEEEE
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----EASYDRIYS 136 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----~~~~D~v~~ 136 (291)
..++.+|||||||+|..+..++..+|+.+|+++|+|+.+++.+++++...++++++++++|++++.. .++||+|++
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEE
Confidence 3568899999999999999999998899999999999999999999999998789999999988654 278999999
Q ss_pred cccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 137 IEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 137 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
..+ .+...+++.+.++|||||++++..
T Consensus 158 ~a~----~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 158 RAV----APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp ESS----CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCc----CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 753 567889999999999999988754
No 101
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.69 E-value=2.3e-16 Score=133.90 Aligned_cols=112 Identities=15% Similarity=0.202 Sum_probs=93.6
Q ss_pred HHHcCCC-CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCcc---CCC
Q 022810 56 CERSRLE-DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM---EAS 130 (291)
Q Consensus 56 ~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~---~~~ 130 (291)
...+... ++.+|||+|||+|..+..++++.+ .+|+|+|+++.+++.|++++..+++. +++++++|+.+... .++
T Consensus 41 ~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 119 (259)
T 3lpm_A 41 AKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKER 119 (259)
T ss_dssp HHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTC
T ss_pred HHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCC
Confidence 3445666 789999999999999999998853 49999999999999999999998884 69999999998753 378
Q ss_pred ccEEEEccccccc--------------------ccHHHHHHHHHhccccCeeEEEEee
Q 022810 131 YDRIYSIEMFEHM--------------------KNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 131 ~D~v~~~~~l~~~--------------------~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
||+|++++++... .+...+++.+.++|+|||++++..+
T Consensus 120 fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 177 (259)
T 3lpm_A 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR 177 (259)
T ss_dssp EEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc
Confidence 9999999876543 2356799999999999999998653
No 102
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.68 E-value=3.8e-17 Score=139.06 Aligned_cols=107 Identities=17% Similarity=0.153 Sum_probs=85.9
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCC--------------------------
Q 022810 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLEL-------------------------- 112 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~-------------------------- 112 (291)
+..++.+|||||||+|.++..++.. +. +|+|+|+|+.+++.|+++++....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 4557889999999999888777665 44 799999999999999987654310
Q ss_pred ---CCeE-EEEccccCC-cc----CCCccEEEEccccccc----ccHHHHHHHHHhccccCeeEEEEee
Q 022810 113 ---QNVE-IIVADISTF-EM----EASYDRIYSIEMFEHM----KNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 113 ---~~i~-~~~~d~~~~-~~----~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
.++. ++++|+.+. +. .++||+|+++.+++++ ++...+++++.++|||||.|++...
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 1243 889999874 21 2689999999999886 5667899999999999999999764
No 103
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.68 E-value=6.8e-16 Score=127.07 Aligned_cols=115 Identities=25% Similarity=0.280 Sum_probs=98.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM- 127 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~- 127 (291)
.....+++.+...++.+|||+|||+|.++..+++.. |..+|+++|+++.+++.+++++...+.+++.++.+|+.....
T Consensus 64 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 143 (215)
T 2yxe_A 64 HMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEP 143 (215)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGG
T ss_pred HHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCC
Confidence 345566677778889999999999999999999886 448999999999999999999988888789999999865433
Q ss_pred CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 128 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 128 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
.++||+|++..+++++. +.+.+.|+|||++++.....
T Consensus 144 ~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 144 LAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp GCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred CCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 37899999999998886 47889999999999987654
No 104
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.68 E-value=2.9e-16 Score=140.12 Aligned_cols=121 Identities=21% Similarity=0.297 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHcC--CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcccc
Q 022810 46 DAEKAMLELYCERSR--LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIS 123 (291)
Q Consensus 46 ~~~~~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~ 123 (291)
.....+++.+...+. ..++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++..+++ +++++++|+.
T Consensus 214 ~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~-~v~~~~~D~~ 290 (381)
T 3dmg_A 214 PASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANAL-KAQALHSDVD 290 (381)
T ss_dssp HHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTC-CCEEEECSTT
T ss_pred HHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCC-CeEEEEcchh
Confidence 333445555555442 346789999999999999999987 78999999999999999999998887 5999999999
Q ss_pred CCccC-CCccEEEEcccccc-----cccHHHHHHHHHhccccCeeEEEEeec
Q 022810 124 TFEME-ASYDRIYSIEMFEH-----MKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 124 ~~~~~-~~~D~v~~~~~l~~-----~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+...+ ++||+|+++.++++ ..+...+++++.++|+|||.+++....
T Consensus 291 ~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 291 EALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp TTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred hccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 87665 79999999999987 466789999999999999999997543
No 105
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.68 E-value=3.5e-17 Score=137.02 Aligned_cols=114 Identities=12% Similarity=0.061 Sum_probs=91.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--c
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--M 127 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~--~ 127 (291)
...+.+.+.+ ..+|.+|||||||+|..+..+++.. ..++++||+|+.+++.|+++....+. ++.++.+|+.+.. .
T Consensus 48 ~~m~~~a~~~-~~~G~rVLdiG~G~G~~~~~~~~~~-~~~v~~id~~~~~~~~a~~~~~~~~~-~~~~~~~~a~~~~~~~ 124 (236)
T 3orh_A 48 PYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQTH-KVIPLKGLWEDVAPTL 124 (236)
T ss_dssp HHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHTTSC-EEEEEEEECCHHHHHHHHHHGGGCSS-EEEEEESCHHHHGGGS
T ss_pred HHHHHHHHhh-ccCCCeEEEECCCccHHHHHHHHhC-CcEEEEEeCCHHHHHHHHHHHhhCCC-ceEEEeehHHhhcccc
Confidence 3334444433 3578899999999999999998765 46899999999999999998877665 7889999987653 2
Q ss_pred C-CCccEEEE-----cccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 128 E-ASYDRIYS-----IEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 ~-~~~D~v~~-----~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+ ++||.|+. ...+++..+...+++++.++|||||+|.+.
T Consensus 125 ~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 125 PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred cccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 3 78999975 345667788999999999999999998763
No 106
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.68 E-value=1.5e-16 Score=126.00 Aligned_cols=105 Identities=12% Similarity=0.177 Sum_probs=89.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc--C---CCccEEEEc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--E---ASYDRIYSI 137 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~--~---~~~D~v~~~ 137 (291)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ +++++++|+.+... + ++||+|+++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASE--GWEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHT--TCEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 6789999999999999999987 45699999999999999999998887 89999999987422 1 379999999
Q ss_pred ccccccccHHHHHHHHH--hccccCeeEEEEeeccCC
Q 022810 138 EMFEHMKNYQNLLKKIS--KWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 138 ~~l~~~~~~~~~l~~~~--~~L~pgG~l~i~~~~~~~ 172 (291)
.+++ .+....++.+. ++|+|||.+++.++....
T Consensus 118 ~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 118 PPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp CCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred CCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 8875 55566777777 999999999998876544
No 107
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.67 E-value=6.4e-16 Score=137.96 Aligned_cols=114 Identities=17% Similarity=0.115 Sum_probs=99.9
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCCc
Q 022810 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASY 131 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~~~~ 131 (291)
..+++.+...++.+|||||||+|..+..+++.+|+.+++++|+ +.+++.+++++...++. +++++.+|+.+ +.+..|
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~ 249 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPVTA 249 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCCE
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCCCC
Confidence 3455566677889999999999999999999998899999999 99999999999888874 79999999976 334459
Q ss_pred cEEEEcccccccccHH--HHHHHHHhccccCeeEEEEee
Q 022810 132 DRIYSIEMFEHMKNYQ--NLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 132 D~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~ 168 (291)
|+|++..+++++++.. .+++++.++|+|||++++.++
T Consensus 250 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 250 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 9999999999997664 899999999999999998776
No 108
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.67 E-value=5.1e-16 Score=128.60 Aligned_cols=121 Identities=12% Similarity=0.162 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC--CeEEEEcc
Q 022810 45 EDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ--NVEIIVAD 121 (291)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~~--~i~~~~~d 121 (291)
.......+..++...+..++.+|||||||+|..+..+++..| +.+|+++|+++.+++.|+++++..++. +++++++|
T Consensus 38 ~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gd 117 (221)
T 3dr5_A 38 DEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSR 117 (221)
T ss_dssp CHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC
T ss_pred CHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcC
Confidence 344455666676666555566999999999999999999864 789999999999999999999998885 79999999
Q ss_pred ccCCc--c-CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 122 ISTFE--M-EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 122 ~~~~~--~-~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
+.+.. . .++||+|++.... .+...+++.+.++|+|||++++...
T Consensus 118 a~~~l~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 118 PLDVMSRLANDSYQLVFGQVSP---MDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp HHHHGGGSCTTCEEEEEECCCT---TTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred HHHHHHHhcCCCcCeEEEcCcH---HHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 87753 2 3789999997643 5667899999999999999998543
No 109
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.67 E-value=7e-16 Score=126.59 Aligned_cols=107 Identities=13% Similarity=0.180 Sum_probs=91.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 140 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~~~l 140 (291)
.++.+|||+|||+|.++..+++..+ .+|+++|+|+.+++.++++... .+++.++++|+.+++.+ ++||+|+++.++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~ 117 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDFPSASFDVVLEKGTL 117 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCSCSSCEEEEEEESHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCCCCCcccEEEECcch
Confidence 5788999999999999999998742 3899999999999999987653 24799999999987655 789999999888
Q ss_pred cccc---------------cHHHHHHHHHhccccCeeEEEEeeccC
Q 022810 141 EHMK---------------NYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 141 ~~~~---------------~~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
+++. +...+++++.++|+|||.+++.++...
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 118 DALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp HHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred hhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 6553 668899999999999999999887653
No 110
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.67 E-value=6.3e-16 Score=137.55 Aligned_cols=108 Identities=13% Similarity=0.215 Sum_probs=95.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCc--cCCCccEEEEcc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFE--MEASYDRIYSIE 138 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~--~~~~~D~v~~~~ 138 (291)
.++.+|||||||+|..+..+++.+|+.+++++|+ +.+++.|++++...++ ++++++.+|+.+.. .+++||+|++..
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~ 256 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQ 256 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEES
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEec
Confidence 4568999999999999999999999999999999 9999999999887776 57999999998863 447899999999
Q ss_pred cccccccH--HHHHHHHHhccccCeeEEEEeecc
Q 022810 139 MFEHMKNY--QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 139 ~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
++|++++. ..+++++++.|+|||++++.++..
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (363)
T 3dp7_A 257 FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLW 290 (363)
T ss_dssp CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCT
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeecc
Confidence 99988654 578999999999999999977644
No 111
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.67 E-value=2.7e-17 Score=134.95 Aligned_cols=118 Identities=16% Similarity=0.176 Sum_probs=78.4
Q ss_pred HHHHHHHHHHcCC-CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc
Q 022810 49 KAMLELYCERSRL-EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM 127 (291)
Q Consensus 49 ~~~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~ 127 (291)
..+++.+++.+.. .++.+|||+|||+|..+..+++..|+.+++|+|+|+.+++.+++++...+. +++++++|+.+...
T Consensus 15 ~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~ 93 (215)
T 4dzr_A 15 EVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLI 93 (215)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhh
Confidence 4556666666655 678899999999999999999998888999999999999999999988777 78999999987433
Q ss_pred C-----CCccEEEEcccccccccH--------------------------HHHHHHHHhccccCee-EEEEe
Q 022810 128 E-----ASYDRIYSIEMFEHMKNY--------------------------QNLLKKISKWMKEDTL-LFVHH 167 (291)
Q Consensus 128 ~-----~~~D~v~~~~~l~~~~~~--------------------------~~~l~~~~~~L~pgG~-l~i~~ 167 (291)
. ++||+|+++.+++...+. ..+++++.++|||||+ +++..
T Consensus 94 ~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 94 ERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp HHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred hhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 3 789999998776543221 6788899999999999 55543
No 112
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.67 E-value=6.8e-16 Score=126.85 Aligned_cols=106 Identities=19% Similarity=0.127 Sum_probs=84.7
Q ss_pred cCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC----ccCCCccEE
Q 022810 59 SRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF----EMEASYDRI 134 (291)
Q Consensus 59 ~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~----~~~~~~D~v 134 (291)
+.+.++.+|||+|||+|..+..+++..++.+|+|+|+|+.+++.+.+.++.. .++.++.+|+... +..++||+|
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~fD~V 130 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIVEKVDLI 130 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTCCCEEEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccccceeEE
Confidence 4567889999999999999999999876579999999999988777766543 3788999998774 233789999
Q ss_pred EEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 135 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 135 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
+++.. ...+...+++++.++|||||.+++...
T Consensus 131 ~~~~~--~~~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 131 YQDIA--QKNQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp EECCC--STTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEecc--ChhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 99732 222344568999999999999999753
No 113
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.67 E-value=5e-16 Score=129.30 Aligned_cols=111 Identities=18% Similarity=0.216 Sum_probs=94.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-C
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-E 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~-~ 128 (291)
.....+++.+...++.+|||+|||+|.++..+++. +.+|+++|+++.+++.++++....+ +++++.+|+.+... .
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~~~~~~ 132 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEI--VDKVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTLGYEEE 132 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHH--cCEEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCcccccccC
Confidence 44566777777888999999999999999999988 5899999999999999999887665 79999999987332 3
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
++||+|++..+++++. ..+.++|+|||++++..+..
T Consensus 133 ~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 133 KPYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred CCccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 7899999999998886 36889999999999987654
No 114
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.67 E-value=2.1e-16 Score=141.21 Aligned_cols=115 Identities=21% Similarity=0.334 Sum_probs=96.4
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCC
Q 022810 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~~~ 130 (291)
.+.+.......++.+|||||||+|.++..+++.. ..+|+|+|+| .+++.|+++++.+++. +++++++|+.++..+++
T Consensus 52 ~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 129 (376)
T 3r0q_C 52 FNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEK 129 (376)
T ss_dssp HHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSC
T ss_pred HHHHHhccccCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCc
Confidence 3444455566788999999999999999999872 3499999999 9999999999998884 59999999999877689
Q ss_pred ccEEEEccccccc---ccHHHHHHHHHhccccCeeEEEEee
Q 022810 131 YDRIYSIEMFEHM---KNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 131 ~D~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
||+|++..+.+.+ .....+++.+.++|||||++++...
T Consensus 130 ~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 130 VDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp EEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred ceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 9999997755555 5678899999999999999977443
No 115
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.67 E-value=2.9e-16 Score=128.32 Aligned_cols=107 Identities=15% Similarity=0.269 Sum_probs=90.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC-ccC-CCccEEEEcccc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-EME-ASYDRIYSIEMF 140 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~-~~~-~~~D~v~~~~~l 140 (291)
++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.|++++...++++++++++|+.+. +.. ++||+|+++.++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 57899999999999999887763 359999999999999999999998877899999998874 323 689999999885
Q ss_pred cccccHHHHHHHHHh--ccccCeeEEEEeeccC
Q 022810 141 EHMKNYQNLLKKISK--WMKEDTLLFVHHFCHK 171 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~--~L~pgG~l~i~~~~~~ 171 (291)
+ ......+++.+.+ +|+|||++++......
T Consensus 133 ~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 133 R-RGLLEETINLLEDNGWLADEALIYVESEVEN 164 (202)
T ss_dssp S-TTTHHHHHHHHHHTTCEEEEEEEEEEEEGGG
T ss_pred C-CCcHHHHHHHHHhcCccCCCcEEEEEECCCc
Confidence 4 5667788888865 5999999999876543
No 116
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.67 E-value=7.2e-16 Score=130.30 Aligned_cols=114 Identities=16% Similarity=0.230 Sum_probs=98.6
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHhCCCC-eEEEEccccCCccCC
Q 022810 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVLELQN-VEIIVADISTFEMEA 129 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~-i~~~~~d~~~~~~~~ 129 (291)
...++..+...++.+|||+|||+|.++..+++. .|+.+|+++|+++.+++.|+++++..++++ ++++.+|+.+....+
T Consensus 82 ~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (255)
T 3mb5_A 82 AALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEE 161 (255)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCC
T ss_pred HHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCC
Confidence 345667778889999999999999999999998 678999999999999999999999988854 999999998764447
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 130 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+||+|+++ .++...+++++.++|+|||.+++..++.
T Consensus 162 ~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 162 NVDHVILD-----LPQPERVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp SEEEEEEC-----SSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred CcCEEEEC-----CCCHHHHHHHHHHHcCCCCEEEEEECCH
Confidence 89999984 3566789999999999999999876543
No 117
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.67 E-value=3.5e-16 Score=130.59 Aligned_cols=104 Identities=15% Similarity=0.253 Sum_probs=91.2
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCcc---CCCccEEEEc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM---EASYDRIYSI 137 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~---~~~~D~v~~~ 137 (291)
.++.+|||||||+|..+..+++..|+.+|+++|+++.+++.|++++...++. +++++.+|+.+... .++||+|++.
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 4678999999999999999998777899999999999999999999998884 89999999987543 4789999987
Q ss_pred ccccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 138 EMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 138 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
.. ..+...+++.+.++|+|||++++...
T Consensus 150 ~~---~~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 150 AA---KAQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp TT---SSSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred Cc---HHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 54 35678899999999999999988543
No 118
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.67 E-value=1.3e-15 Score=121.73 Aligned_cols=112 Identities=16% Similarity=0.276 Sum_probs=96.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~- 128 (291)
.....+++.+...++.+|||+|||+|.++..+++ ++.+++++|+++.+++.+++++...++++++++++|+.+ ..+
T Consensus 22 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~ 98 (183)
T 2yxd_A 22 EIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDK 98 (183)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGG
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccC
Confidence 3445566666777889999999999999999998 589999999999999999999998888789999999987 334
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
++||+|+++.+ .+...+++.+.++ |||.+++..+..
T Consensus 99 ~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~ 134 (183)
T 2yxd_A 99 LEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVL 134 (183)
T ss_dssp CCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCH
T ss_pred CCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEeccc
Confidence 78999999988 6778899999998 999999987543
No 119
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.67 E-value=5.6e-16 Score=146.85 Aligned_cols=121 Identities=22% Similarity=0.229 Sum_probs=100.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHh------CCCCeEEEEccc
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVL------ELQNVEIIVADI 122 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-p~~~v~~vD~s~~~~~~a~~~~~~~------~~~~i~~~~~d~ 122 (291)
..++.+++.+...++.+|||||||+|.++..+++.. |..+|+|+|+|+.+++.|++++... +..+++++++|+
T Consensus 708 qRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 708 QRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred HHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 334445555544578899999999999999999885 3479999999999999999876643 446799999999
Q ss_pred cCCccC-CCccEEEEcccccccccHH--HHHHHHHhccccCeeEEEEeeccC
Q 022810 123 STFEME-ASYDRIYSIEMFEHMKNYQ--NLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 123 ~~~~~~-~~~D~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
.+++.. ++||+|++..+++|+++.. .+++++.++|||| .+++.+++..
T Consensus 788 ~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~e 838 (950)
T 3htx_A 788 LEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYE 838 (950)
T ss_dssp TSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGG
T ss_pred HhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCch
Confidence 998776 8999999999999997654 5999999999999 8888877653
No 120
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.67 E-value=4.9e-17 Score=147.30 Aligned_cols=123 Identities=11% Similarity=0.145 Sum_probs=100.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCe--EEEE
Q 022810 42 KTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNV--EIIV 119 (291)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i--~~~~ 119 (291)
..+........+.+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++ +.+.. .+..
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~ 159 (416)
T 4e2x_A 86 SVMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEK 159 (416)
T ss_dssp HHHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT----TCCEECSCCSH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc----CCCcceeeech
Confidence 3466666777888888888888999999999999999999987 77999999999999888765 33211 1223
Q ss_pred ccccCCccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 120 ADISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 120 ~d~~~~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
.+...++.+ ++||+|++..+++|++++..+++++.++|||||++++..+..
T Consensus 160 ~~~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 211 (416)
T 4e2x_A 160 ATADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYL 211 (416)
T ss_dssp HHHHHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred hhHhhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 444444444 899999999999999999999999999999999999987754
No 121
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.67 E-value=5e-16 Score=136.55 Aligned_cols=116 Identities=16% Similarity=0.130 Sum_probs=100.3
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCC
Q 022810 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~~~ 130 (291)
...+++.++..+ .+|||+|||+|..+..+++.+|+.+++++|+ +.+++.+++++...++ ++++++.+|+.+ +.+++
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 233 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVPSN 233 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCCSS
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCCCC
Confidence 455666666666 8999999999999999999999999999999 9999999998877665 479999999987 44578
Q ss_pred ccEEEEcccccccccHH--HHHHHHHhccccCeeEEEEeecc
Q 022810 131 YDRIYSIEMFEHMKNYQ--NLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
||+|++..+++++++.. .+++++++.|+|||++++.+...
T Consensus 234 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 234 GDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTI 275 (334)
T ss_dssp CSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred CCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 99999999999886655 89999999999999999987654
No 122
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.67 E-value=3.7e-16 Score=132.70 Aligned_cols=114 Identities=13% Similarity=0.229 Sum_probs=95.0
Q ss_pred HHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH---hCCC-CeEEEEccccCCc-----
Q 022810 56 CERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV---LELQ-NVEIIVADISTFE----- 126 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~---~~~~-~i~~~~~d~~~~~----- 126 (291)
...+...++.+|||+|||+|.++..++++.|+.+|+++|+++.+++.|++++.. +++. +++++++|+.+..
T Consensus 29 ~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~ 108 (260)
T 2ozv_A 29 ASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVE 108 (260)
T ss_dssp HHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHH
T ss_pred HHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhh
Confidence 344566678899999999999999999998888999999999999999999987 7774 6999999998872
Q ss_pred --c-CCCccEEEEccccccc------------------ccHHHHHHHHHhccccCeeEEEEeec
Q 022810 127 --M-EASYDRIYSIEMFEHM------------------KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 127 --~-~~~~D~v~~~~~l~~~------------------~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
. .++||+|++++++... .+...+++.+.++|+|||.+++..+.
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP 172 (260)
T ss_dssp TTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred hccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH
Confidence 2 3789999999766432 23678999999999999999886553
No 123
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.66 E-value=4.2e-16 Score=133.46 Aligned_cols=112 Identities=21% Similarity=0.285 Sum_probs=93.7
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHh-CCCCeEEEEccccCCccCCC
Q 022810 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVL-ELQNVEIIVADISTFEMEAS 130 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~p~~~v~~vD~s~~~~~~a~~~~~~~-~~~~i~~~~~d~~~~~~~~~ 130 (291)
..++..+...++.+|||+|||+|..+..+++. .|+.+|+++|+++.+++.+++++... +.++++++.+|+.+....++
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~ 179 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQM 179 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCC
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCC
Confidence 35666677888999999999999999999987 67889999999999999999999887 77789999999988433378
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
||+|++ ++++...+++++.++|+|||++++.++.
T Consensus 180 fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 180 YDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp EEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred ccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 999998 4566778999999999999999998764
No 124
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.66 E-value=2.3e-16 Score=135.89 Aligned_cols=105 Identities=16% Similarity=0.165 Sum_probs=82.4
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh-----------------CC------------
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL-----------------EL------------ 112 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~-----------------~~------------ 112 (291)
.++.+|||||||+|..+..++.. ++.+|+|+|+|+.+++.|++++... +.
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 36789999999999955544433 3679999999999999998865321 10
Q ss_pred -CCeEEEEccccC-Ccc-----C-CCccEEEEcccccc----cccHHHHHHHHHhccccCeeEEEEe
Q 022810 113 -QNVEIIVADIST-FEM-----E-ASYDRIYSIEMFEH----MKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 113 -~~i~~~~~d~~~-~~~-----~-~~~D~v~~~~~l~~----~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
..+.++.+|+.+ .+. + ++||+|+++.++++ ++++..+++++.++|||||+|++..
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 015677889887 432 1 56999999999999 6688999999999999999999964
No 125
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.66 E-value=4.1e-16 Score=130.11 Aligned_cols=105 Identities=16% Similarity=0.317 Sum_probs=92.0
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCC-c-c--CCCccEEE
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTF-E-M--EASYDRIY 135 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~-~-~--~~~~D~v~ 135 (291)
..++.+|||+|||+|..+..+++..|+.+|+++|+++.+++.|++++...++ +++.++.+|+.+. + . .++||+|+
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 3467899999999999999999998889999999999999999999998887 4699999999874 2 1 36899999
Q ss_pred EcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 136 SIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 136 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
+..+. .+...+++.+.+.|+|||++++.+.
T Consensus 132 ~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 132 IDAAK---GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp EEGGG---SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred ECCCH---HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 98775 4678999999999999999998754
No 126
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.66 E-value=5e-16 Score=139.87 Aligned_cols=117 Identities=17% Similarity=0.231 Sum_probs=96.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHH-------HHHHHHhC--CCCeEEEEc
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFI-------EEQCRVLE--LQNVEIIVA 120 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a-------~~~~~~~~--~~~i~~~~~ 120 (291)
..+..+++.+.+.++.+|||||||+|.++..+++.++..+|+|+|+++.+++.| ++++...| .++++++++
T Consensus 229 ~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~g 308 (433)
T 1u2z_A 229 NFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK 308 (433)
T ss_dssp HHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEc
Confidence 455667777888899999999999999999999987556899999999999998 88888888 468999988
Q ss_pred cccCC--cc---CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 121 DISTF--EM---EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 121 d~~~~--~~---~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
|.... +. .++||+|+++.++ +.++....++++.+.|||||.+++..
T Consensus 309 D~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 309 KSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp SCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred CccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEee
Confidence 64421 11 2689999998766 45788889999999999999998864
No 127
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.66 E-value=3.1e-16 Score=129.84 Aligned_cols=107 Identities=14% Similarity=0.161 Sum_probs=90.7
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCcc--C-----CCcc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM--E-----ASYD 132 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~--~-----~~~D 132 (291)
.++.+|||||||+|..+..+++..+ +.+|+++|+++.+++.|++++...++. +++++++|+.+... . ++||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 3578999999999999999998754 789999999999999999999999884 69999999865321 1 5899
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 133 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+|++....++..+...++..+ ++|+|||++++....
T Consensus 137 ~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 137 MVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp EEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred EEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 999998877776666778887 999999999986554
No 128
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.66 E-value=1.2e-15 Score=135.23 Aligned_cols=121 Identities=14% Similarity=0.098 Sum_probs=103.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~ 128 (291)
.+...++......++.+|||+|||+|.+++.++... |..+++|+|+++.+++.|+++++..+++++++.++|+.+++.+
T Consensus 190 ~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~ 269 (354)
T 3tma_A 190 VLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRF 269 (354)
T ss_dssp HHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGT
T ss_pred HHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccc
Confidence 344556667777889999999999999999999986 6789999999999999999999999987899999999998765
Q ss_pred -CCccEEEEccccccc--------ccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 129 -ASYDRIYSIEMFEHM--------KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 129 -~~~D~v~~~~~l~~~--------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
..||+|++++++... ..+..+++.+.++|+|||.+++.++..
T Consensus 270 ~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 270 FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 678999999886432 124779999999999999999987654
No 129
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.66 E-value=3.6e-16 Score=131.32 Aligned_cols=106 Identities=16% Similarity=0.260 Sum_probs=91.8
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC------CCccEE
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME------ASYDRI 134 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~------~~~D~v 134 (291)
+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.++++. ...+++++++|+.+.+.. ..||+|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~--~~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFF--PRVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAAQIHSEIGDANI 128 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHS--SCEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHHHHHHHHCSCEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhC--CCEEEEECCHHHHHHHHHhC---cccCceEEECcccccccccccccccCccEE
Confidence 4678899999999999999999985 49999999999999998876 223799999999886433 248999
Q ss_pred EEcccccccc--cHHHHHHHHHhccccCeeEEEEeeccC
Q 022810 135 YSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 135 ~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
++..++++++ +...+++++.++|||||++++.++...
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 129 YMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp EEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred EEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 9999999997 889999999999999999988877553
No 130
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.66 E-value=8.7e-16 Score=129.69 Aligned_cols=153 Identities=10% Similarity=0.087 Sum_probs=112.2
Q ss_pred ChHHHHHhhCCCCCcccc---------ccCCCCCCHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCc--chHHHHHH-HH
Q 022810 18 PTSFFKLVLGKYFKYSCC---------YFSDASKTLEDAEKAMLELYCERSRL-EDGHTVLDVGCGW--GSLSLYIA-QK 84 (291)
Q Consensus 18 ~~~~y~~~~~~~~~y~~~---------~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~vLDiGcG~--G~~~~~l~-~~ 84 (291)
.+..|++|+|.+-+|... .+. .-..+.......+...++.+.. ....+|||||||+ +.++..++ +.
T Consensus 24 ~aR~yd~~LgGk~n~~~Dr~~~~~~~~~~P-~~~~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~ 102 (277)
T 3giw_A 24 SARIYDYIIGGKDYYPADKEAGDAMSREWP-ALPVHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSV 102 (277)
T ss_dssp HHHHHHHHTTCSCCCHHHHHHHHHHHHHCT-THHHHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHH
T ss_pred cchhheeecCCccCCHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHH
Confidence 368999999988887431 111 1112334445566666665542 3447899999997 43445444 45
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-------CCCcc-----EEEEccccccccc---HHHH
Q 022810 85 YSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-------EASYD-----RIYSIEMFEHMKN---YQNL 149 (291)
Q Consensus 85 ~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~-------~~~~D-----~v~~~~~l~~~~~---~~~~ 149 (291)
.|+++|+++|.|+.|++.|++++...+..+++++++|+.+... .+.|| .|+++.+|||+++ +..+
T Consensus 103 ~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~ 182 (277)
T 3giw_A 103 APESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGI 182 (277)
T ss_dssp CTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHH
T ss_pred CCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHH
Confidence 7899999999999999999988765433479999999988521 14455 6889999999977 5789
Q ss_pred HHHHHhccccCeeEEEEeeccC
Q 022810 150 LKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 150 l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
++++.+.|+|||+|++...+..
T Consensus 183 l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 183 VRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp HHHHHTTSCTTCEEEEEEECCT
T ss_pred HHHHHHhCCCCcEEEEEeccCC
Confidence 9999999999999999887654
No 131
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.66 E-value=5.8e-16 Score=129.47 Aligned_cols=108 Identities=15% Similarity=0.306 Sum_probs=86.4
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH------hCCCCeEEEEccccC-Cc--cC-CC
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV------LELQNVEIIVADIST-FE--ME-AS 130 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~------~~~~~i~~~~~d~~~-~~--~~-~~ 130 (291)
..++.+|||||||+|.++..+++.+|+..|+|+|+|+.+++.|++++.. .+.+++.++++|+.+ ++ .+ ++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 3466799999999999999999998889999999999999999988764 345689999999987 43 33 78
Q ss_pred ccEEEEccccccccc--------HHHHHHHHHhccccCeeEEEEee
Q 022810 131 YDRIYSIEMFEHMKN--------YQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
||.|++..+-.+... ...+++.+.++|||||.|++.+.
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 999998654433211 14799999999999999998764
No 132
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.65 E-value=5.3e-16 Score=130.87 Aligned_cols=118 Identities=15% Similarity=0.144 Sum_probs=94.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHH--CCCCEEEEEcCCHHHHHHHHHHHHHh---CCC-C--------
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK--YSNCKITGICNSKTQKEFIEEQCRVL---ELQ-N-------- 114 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~p~~~v~~vD~s~~~~~~a~~~~~~~---~~~-~-------- 114 (291)
..++..+++.+...++.+|||+|||+|.++..+++. .++.+|+|+|+|+.+++.|++++... ++. +
T Consensus 37 ~~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~ 116 (250)
T 1o9g_A 37 TEIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQS 116 (250)
T ss_dssp HHHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhh
Confidence 345566666555456789999999999999999987 66789999999999999999887655 332 1
Q ss_pred -----------------eE-------------EEEccccCCcc-----C-CCccEEEEcccccccc---------cHHHH
Q 022810 115 -----------------VE-------------IIVADISTFEM-----E-ASYDRIYSIEMFEHMK---------NYQNL 149 (291)
Q Consensus 115 -----------------i~-------------~~~~d~~~~~~-----~-~~~D~v~~~~~l~~~~---------~~~~~ 149 (291)
++ ++++|+.+... . .+||+|+++.++.... ....+
T Consensus 117 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~ 196 (250)
T 1o9g_A 117 ERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGL 196 (250)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHH
T ss_pred hhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHH
Confidence 66 99999987542 3 5899999998776543 35689
Q ss_pred HHHHHhccccCeeEEEE
Q 022810 150 LKKISKWMKEDTLLFVH 166 (291)
Q Consensus 150 l~~~~~~L~pgG~l~i~ 166 (291)
++++.++|+|||++++.
T Consensus 197 l~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 197 LRSLASALPAHAVIAVT 213 (250)
T ss_dssp HHHHHHHSCTTCEEEEE
T ss_pred HHHHHHhcCCCcEEEEe
Confidence 99999999999999984
No 133
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.65 E-value=6.9e-16 Score=128.57 Aligned_cols=104 Identities=14% Similarity=0.184 Sum_probs=87.5
Q ss_pred HHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC----CccCCCc
Q 022810 56 CERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST----FEMEASY 131 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~----~~~~~~~ 131 (291)
++.+.+.++.+|||+|||+|..+..+++..+..+|+|+|+|+.+++.++++++.. +++.++.+|+.+ .+..++|
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~ 144 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEYANIVEKV 144 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGGTTTSCCE
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcccccccCccE
Confidence 4555667889999999999999999999876689999999999999999887554 589999999987 4444789
Q ss_pred cEEEEcccccccccH---HHHHHHHHhccccCeeEEEE
Q 022810 132 DRIYSIEMFEHMKNY---QNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 132 D~v~~~~~l~~~~~~---~~~l~~~~~~L~pgG~l~i~ 166 (291)
|+|+. ++++. ..+++++.+.|+|||.+++.
T Consensus 145 D~v~~-----~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 145 DVIYE-----DVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEE-----CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEE-----ecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 99993 33344 77899999999999999986
No 134
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.65 E-value=1.1e-15 Score=135.29 Aligned_cols=116 Identities=22% Similarity=0.221 Sum_probs=97.8
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCC
Q 022810 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~~~ 130 (291)
...+++.+...++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|+++++.+++ ++++++.+|+.+.+.+++
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 116 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 116 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHHHHhccccCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCc
Confidence 345566666678899999999999999999876 356999999996 88999999998888 589999999998876678
Q ss_pred ccEEEEccccccc--ccHHHHHHHHHhccccCeeEEEEeec
Q 022810 131 YDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 131 ~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
||+|++..+++++ ++....+..+.++|||||.+++...+
T Consensus 117 ~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (348)
T 2y1w_A 117 VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGD 157 (348)
T ss_dssp EEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEEE
T ss_pred eeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecCc
Confidence 9999999888776 45678888999999999999875443
No 135
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.65 E-value=6.5e-16 Score=132.76 Aligned_cols=116 Identities=14% Similarity=0.152 Sum_probs=92.9
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCC
Q 022810 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEA 129 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~~ 129 (291)
+++.+++.+...++.+|||+|||+|.++..+++. |+.+|+|+|+|+.+++.|++++...+++ +++++++|+.+.. ++
T Consensus 111 lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~-~~ 188 (284)
T 1nv8_A 111 LVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF-KE 188 (284)
T ss_dssp HHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG-GG
T ss_pred HHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc-cc
Confidence 3444444443335679999999999999999999 8999999999999999999999998885 4999999998743 25
Q ss_pred Cc---cEEEEcccccccc-------------------cHHHHHHHHH-hccccCeeEEEEee
Q 022810 130 SY---DRIYSIEMFEHMK-------------------NYQNLLKKIS-KWMKEDTLLFVHHF 168 (291)
Q Consensus 130 ~~---D~v~~~~~l~~~~-------------------~~~~~l~~~~-~~L~pgG~l~i~~~ 168 (291)
+| |+|++++++.... +...+++++. +.|+|||.+++...
T Consensus 189 ~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 189 KFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp GTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred ccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 78 9999986553221 1126899999 99999999998643
No 136
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.65 E-value=1.9e-15 Score=134.25 Aligned_cols=115 Identities=15% Similarity=0.153 Sum_probs=100.4
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCCc
Q 022810 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASY 131 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~~~~ 131 (291)
..+++.+...++.+|||||||+|..+..+++.+|+.+++++|+ +.+++.+++++...++. +++++.+|+.+ ..+..|
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~ 250 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPRKA 250 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSSCE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCCCc
Confidence 3455666777889999999999999999999998899999999 99999999999888874 79999999976 234459
Q ss_pred cEEEEcccccccccH--HHHHHHHHhccccCeeEEEEeec
Q 022810 132 DRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 132 D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
|+|++..+++++++. ..+++++.++|+|||++++.++.
T Consensus 251 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 251 DAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 999999999999765 58999999999999999998765
No 137
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.65 E-value=5.9e-16 Score=136.69 Aligned_cols=115 Identities=20% Similarity=0.220 Sum_probs=97.8
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCcc
Q 022810 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYD 132 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D 132 (291)
..+++.+...++.+|||+|||+|.++..+++..|..+|+++|+|+.+++.+++++...++ +++++.+|+.+.. +++||
T Consensus 186 ~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~-~~~~~~~d~~~~~-~~~fD 263 (343)
T 2pjd_A 186 QLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV-EGEVFASNVFSEV-KGRFD 263 (343)
T ss_dssp HHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC-CCEEEECSTTTTC-CSCEE
T ss_pred HHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC-CCEEEEccccccc-cCCee
Confidence 345555655567799999999999999999998778999999999999999999988877 5788899987754 47899
Q ss_pred EEEEcccccc-----cccHHHHHHHHHhccccCeeEEEEeec
Q 022810 133 RIYSIEMFEH-----MKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 133 ~v~~~~~l~~-----~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+|+++.++++ ..+...+++++.++|+|||.+++....
T Consensus 264 ~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 264 MIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp EEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred EEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 9999999975 355688999999999999999997654
No 138
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.65 E-value=1.8e-15 Score=127.94 Aligned_cols=113 Identities=21% Similarity=0.267 Sum_probs=97.9
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHh-CCCCeEEEEccccCCccC-C
Q 022810 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVL-ELQNVEIIVADISTFEME-A 129 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~p~~~v~~vD~s~~~~~~a~~~~~~~-~~~~i~~~~~d~~~~~~~-~ 129 (291)
..++..+.+.++.+|||+|||+|.++..+++. .|+.+|+++|+++.+++.+++++... +.+++++..+|+.+.+.+ +
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~ 165 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEA 165 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTT
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC
Confidence 45667778889999999999999999999988 56789999999999999999999887 766899999999887444 7
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 130 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+||+|+++ .++...+++++.++|+|||.+++..++.
T Consensus 166 ~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 166 AYDGVALD-----LMEPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp CEEEEEEE-----SSCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred CcCEEEEC-----CcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 89999984 3566789999999999999999977643
No 139
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.65 E-value=5.4e-16 Score=126.77 Aligned_cols=105 Identities=16% Similarity=0.178 Sum_probs=90.8
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcccc
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMF 140 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~l 140 (291)
..++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++...+.++++++++|+.+.. +++||+|+++.++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~fD~i~~~~~~ 135 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV-DGKFDLIVANILA 135 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC-CSCEEEEEEESCH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC-CCCceEEEECCcH
Confidence 357889999999999999998865 45699999999999999999999888866999999998753 4789999999887
Q ss_pred cccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 141 EHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
++ ...+++++.++|+|||++++..+..
T Consensus 136 ~~---~~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 136 EI---LLDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp HH---HHHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred HH---HHHHHHHHHHhcCCCCEEEEEecCc
Confidence 54 4788999999999999999976543
No 140
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.65 E-value=1.7e-15 Score=126.57 Aligned_cols=115 Identities=21% Similarity=0.201 Sum_probs=96.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~- 128 (291)
.....+++.+...++.+|||+|||+|.++..+++..+ .+|+++|+++.+++.+++++...++++++++.+|+......
T Consensus 78 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (235)
T 1jg1_A 78 HMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPK 156 (235)
T ss_dssp HHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCC
Confidence 3445566667788899999999999999999999865 89999999999999999999988887899999997332222
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022810 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
.+||+|++..+++++.+ .+.+.|+|||++++..+...
T Consensus 157 ~~fD~Ii~~~~~~~~~~------~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 157 APYDVIIVTAGAPKIPE------PLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp CCEEEEEECSBBSSCCH------HHHHTEEEEEEEEEEECSSS
T ss_pred CCccEEEECCcHHHHHH------HHHHhcCCCcEEEEEEecCC
Confidence 56999999999987753 67899999999999877543
No 141
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.65 E-value=1.2e-15 Score=129.52 Aligned_cols=100 Identities=19% Similarity=0.297 Sum_probs=87.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEccccc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMFE 141 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~~~l~ 141 (291)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++.. .+ ++++|+.+++.+ ++||+|++..++.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~~~~~~fD~v~~~~~~~ 125 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLPFPSGAFEAVLALGDVL 125 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC----SC--EEECCTTSCCSCTTCEEEEEECSSHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCCCCCCCEEEEEEcchhh
Confidence 7789999999999999999987 7899999999999999887643 12 789999887765 7899999988666
Q ss_pred cc-ccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 142 HM-KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 142 ~~-~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
++ ++...+++++.++|+|||.+++..++.
T Consensus 126 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 126 SYVENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp HHCSCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred hccccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 65 789999999999999999999988764
No 142
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.64 E-value=1.7e-15 Score=121.85 Aligned_cols=114 Identities=18% Similarity=0.177 Sum_probs=96.9
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC-
Q 022810 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME- 128 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~- 128 (291)
....+++.+...++.+|||+|||+|..+..+++. ..+|+++|+|+.+++.+++++...+. +++.+.++|+.+....
T Consensus 21 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 98 (192)
T 1l3i_A 21 VRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGR--VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI 98 (192)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHh--cCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC
Confidence 3445566667788999999999999999999987 48999999999999999999988887 6899999998773222
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
++||+|++..+++ +...+++.+.++|+|||.+++..+.
T Consensus 99 ~~~D~v~~~~~~~---~~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 99 PDIDIAVVGGSGG---ELQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp CCEEEEEESCCTT---CHHHHHHHHHHTEEEEEEEEEEECB
T ss_pred CCCCEEEECCchH---HHHHHHHHHHHhcCCCcEEEEEecC
Confidence 6899999988764 4588999999999999999987664
No 143
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.64 E-value=1.8e-15 Score=133.28 Aligned_cols=110 Identities=22% Similarity=0.334 Sum_probs=93.7
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC-CC
Q 022810 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME-AS 130 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~-~~ 130 (291)
+.+.+.+...++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|+++++.+++ ++++++.+|+.+++.+ ++
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 131 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEK 131 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSC
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCc
Confidence 44445455678899999999999999999987 245999999996 99999999998888 6899999999998776 79
Q ss_pred ccEEEEccc---ccccccHHHHHHHHHhccccCeeEE
Q 022810 131 YDRIYSIEM---FEHMKNYQNLLKKISKWMKEDTLLF 164 (291)
Q Consensus 131 ~D~v~~~~~---l~~~~~~~~~l~~~~~~L~pgG~l~ 164 (291)
||+|++..+ +.+..+...++..+.++|||||.++
T Consensus 132 ~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 132 VDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 999999873 4455678889999999999999987
No 144
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.64 E-value=5.3e-16 Score=131.56 Aligned_cols=108 Identities=13% Similarity=0.162 Sum_probs=89.8
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC---------------------------
Q 022810 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL--------------------------- 112 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~--------------------------- 112 (291)
...++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.+++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 445778999999999999999987732 4999999999999999888754320
Q ss_pred --CCe-EEEEccccCCcc--C---CCccEEEEccccc----ccccHHHHHHHHHhccccCeeEEEEee
Q 022810 113 --QNV-EIIVADISTFEM--E---ASYDRIYSIEMFE----HMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 113 --~~i-~~~~~d~~~~~~--~---~~~D~v~~~~~l~----~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
.++ .++.+|+.+... + ++||+|++..+++ ++++...+++++.++|||||.+++..+
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 027 899999987543 3 6899999999999 667889999999999999999999774
No 145
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.64 E-value=2.3e-15 Score=121.37 Aligned_cols=102 Identities=18% Similarity=0.343 Sum_probs=88.5
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEc-c
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSI-E 138 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~-~ 138 (291)
+.++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++. +++.++++|+.+.+.+ ++||+|+++ .
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~~D~i~~~~~ 116 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQISETDFDLIVSAGN 116 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSCCCCCCEEEEEECCC
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCCCCCCceeEEEECCc
Confidence 457889999999999999999987 789999999999999988764 3689999999987655 789999998 6
Q ss_pred ccccc--ccHHHHHHHHHhccccCeeEEEEeec
Q 022810 139 MFEHM--KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 139 ~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+++++ ++...+++.+.++|+|||.+++..+.
T Consensus 117 ~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~ 149 (195)
T 3cgg_A 117 VMGFLAEDGREPALANIHRALGADGRAVIGFGA 149 (195)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred HHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 78777 45688999999999999999997653
No 146
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.63 E-value=5.5e-16 Score=130.20 Aligned_cols=117 Identities=12% Similarity=0.135 Sum_probs=96.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCc
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFE 126 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~ 126 (291)
...+..++.. .++.+|||||||+|..+..+++..| +.+|+++|+++.+++.|++++...++. +++++.+|+.+..
T Consensus 49 ~~~l~~l~~~---~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l 125 (242)
T 3r3h_A 49 AQFMQMLIRL---TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTL 125 (242)
T ss_dssp HHHHHHHHHH---HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred HHHHHHHHhh---cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 4444444433 3567999999999999999998875 789999999999999999999998884 8999999997643
Q ss_pred c-------CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022810 127 M-------EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 127 ~-------~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
. .++||+|++... ..+...+++.+.++|+|||++++......
T Consensus 126 ~~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~~ 174 (242)
T 3r3h_A 126 HSLLNEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFWD 174 (242)
T ss_dssp HHHHHHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSSS
T ss_pred HHHhhccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCccC
Confidence 2 368999999865 35677899999999999999999765443
No 147
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.63 E-value=1.2e-15 Score=126.37 Aligned_cols=104 Identities=13% Similarity=0.183 Sum_probs=89.7
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC------CCccE
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME------ASYDR 133 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~------~~~D~ 133 (291)
.++.+|||||||+|..+..+++..| +.+|+++|+++.+++.|++++...+++ +++++++|+.+.... ++||+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 4678999999999999999999887 789999999999999999999988884 599999999764221 57999
Q ss_pred EEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 134 IYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 134 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
|++.... +....+++.+.++|+|||++++..+
T Consensus 137 v~~d~~~---~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 137 IFIDADK---QNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp EEECSCG---GGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred EEEcCCc---HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 9988663 4667899999999999999888654
No 148
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.63 E-value=1.9e-16 Score=133.87 Aligned_cols=148 Identities=11% Similarity=0.046 Sum_probs=100.5
Q ss_pred CChHHHHHhhCCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCC--CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEc
Q 022810 17 LPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRL--EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGIC 94 (291)
Q Consensus 17 ~~~~~y~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD 94 (291)
+.......+++..+....+.|..... .......++..++..+.. .++.+|||+|||+|.++..++++.|+.+|+|+|
T Consensus 18 l~~~~~~~~~~~~~~~~~~~~~p~~~-~r~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD 96 (254)
T 2h00_A 18 LTCTLLREDFGLSIDIPLERLIPTVP-LRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATE 96 (254)
T ss_dssp HHHHHHHHHHCCCCCCCTTSCCCCHH-HHHHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEE
T ss_pred HHHHHHHHcCCeeeecCccccCCCcc-chHHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEE
Confidence 34455666677666665554432100 112223444555543332 257799999999999999999887778999999
Q ss_pred CCHHHHHHHHHHHHHhCCC-CeEEEEccccCC---ccC----CCccEEEEcccccccc-c--------------HHHHHH
Q 022810 95 NSKTQKEFIEEQCRVLELQ-NVEIIVADISTF---EME----ASYDRIYSIEMFEHMK-N--------------YQNLLK 151 (291)
Q Consensus 95 ~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~---~~~----~~~D~v~~~~~l~~~~-~--------------~~~~l~ 151 (291)
+|+.+++.|++++...+++ +++++++|+.+. ..+ ++||+|+++++++... + ...++.
T Consensus 97 ~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~ 176 (254)
T 2h00_A 97 VDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTG 176 (254)
T ss_dssp SCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC-------------------------
T ss_pred CCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhh
Confidence 9999999999999988885 599999997652 222 4799999998876543 1 124567
Q ss_pred HHHhccccCeeEEE
Q 022810 152 KISKWMKEDTLLFV 165 (291)
Q Consensus 152 ~~~~~L~pgG~l~i 165 (291)
.+.++|||||.+.+
T Consensus 177 ~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 177 GITEIMAEGGELEF 190 (254)
T ss_dssp CTTTTHHHHTHHHH
T ss_pred hHHHHEecCCEEEE
Confidence 88899999998765
No 149
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.63 E-value=1.5e-15 Score=128.03 Aligned_cols=106 Identities=11% Similarity=0.185 Sum_probs=91.2
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCcc----CCCccEEE
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM----EASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~----~~~~D~v~ 135 (291)
.++.+|||||||+|..+..+++..| +.+|+++|+++.+++.|++++...++. +++++.+|+.+... .++||+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 4678999999999999999999887 789999999999999999999998884 79999999876322 14899999
Q ss_pred EcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 136 SIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 136 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+... ..+...+++.+.++|||||++++.....
T Consensus 142 ~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 142 IDAD---KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp ECSC---GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred ECCc---hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 9764 4567789999999999999998876543
No 150
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.63 E-value=8.3e-16 Score=136.20 Aligned_cols=116 Identities=16% Similarity=0.090 Sum_probs=97.6
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCcc
Q 022810 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYD 132 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D 132 (291)
..+++.++..+..+|||||||+|..+..+++++|+.+++..|. +.+++.++++....+.++|+++.+|+.+.+. ..+|
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~-~~~D 246 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL-PEAD 246 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCC-CCCS
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCC-CCce
Confidence 4455666677788999999999999999999999999999998 8899999887765555789999999987543 4579
Q ss_pred EEEEcccccccccH--HHHHHHHHhccccCeeEEEEeecc
Q 022810 133 RIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 133 ~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+|++..++|+++|. ..+|+++++.|+|||+++|.+...
T Consensus 247 ~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~ 286 (353)
T 4a6d_A 247 LYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLL 286 (353)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCC
T ss_pred EEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeee
Confidence 99999999999765 578999999999999999877543
No 151
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.63 E-value=1.1e-15 Score=126.62 Aligned_cols=107 Identities=12% Similarity=0.137 Sum_probs=89.3
Q ss_pred HHcCCCCCCEEEEEcCCcchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc---cC-CCc
Q 022810 57 ERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE---ME-ASY 131 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~---~~-~~~ 131 (291)
+.+.++||.+|||+|||+|.++..+++. .|..+|+|+|+++.+++.+++++.+. +|+..+.+|..... .. +++
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~~p~~~~~~~~~v 148 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDARFPEKYRHLVEGV 148 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCTTCGGGGTTTCCCE
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEeccCccccccccceE
Confidence 4567899999999999999999999987 47789999999999999998877554 37899999887643 22 789
Q ss_pred cEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 132 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 132 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
|+|++.. .+..+...++.++.+.|||||.+++..
T Consensus 149 DvVf~d~--~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 149 DGLYADV--AQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEEEECC--CCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEec--cCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 9998753 344667889999999999999998864
No 152
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.63 E-value=2.2e-15 Score=128.78 Aligned_cols=107 Identities=20% Similarity=0.260 Sum_probs=94.2
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccc
Q 022810 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEM 139 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~ 139 (291)
.+.++.+|||+|||+|.++..+++..+..+|+++|+++.+++.|+++++.++++++.++++|+.+.+..++||+|+++.+
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p 195 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYV 195 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCC
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCc
Confidence 35678999999999999999999987677999999999999999999999998889999999998732368999999887
Q ss_pred ccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 140 FEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
. +...++..+.+.|+|||++++.+...
T Consensus 196 ~----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 196 H----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp S----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred c----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 5 55678999999999999999877654
No 153
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.63 E-value=1.7e-15 Score=134.05 Aligned_cols=104 Identities=28% Similarity=0.391 Sum_probs=90.4
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC-CCccEEEEcc
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-ASYDRIYSIE 138 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~-~~~D~v~~~~ 138 (291)
+.++.+|||||||+|.++..+++. +..+|+|+|+| .+++.|+++++..+++ +++++++|+++.+.+ ++||+|++..
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~ 141 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEW 141 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECC
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcc
Confidence 457889999999999999999987 35699999999 4999999999998884 599999999998776 8999999977
Q ss_pred ccccc---ccHHHHHHHHHhccccCeeEEEE
Q 022810 139 MFEHM---KNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 139 ~l~~~---~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+.+.+ .+...++..+.++|||||+++..
T Consensus 142 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 142 MGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp CBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 64443 78899999999999999998753
No 154
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.63 E-value=2.6e-16 Score=130.70 Aligned_cols=106 Identities=17% Similarity=0.167 Sum_probs=82.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCC-HHHHHHH---HHHHHHhCCCCeEEEEccccCCccC--CCccEEE
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNS-KTQKEFI---EEQCRVLELQNVEIIVADISTFEME--ASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s-~~~~~~a---~~~~~~~~~~~i~~~~~d~~~~~~~--~~~D~v~ 135 (291)
.++.+|||||||+|.++..+++..|+.+|+|+|+| +.+++.| ++++...+++++.++++|+.+++.. +.+|.|+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 57889999999999999999987788999999999 6666666 7777777777899999999988532 4455555
Q ss_pred Eccccccc-----ccHHHHHHHHHhccccCeeEEEEe
Q 022810 136 SIEMFEHM-----KNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 136 ~~~~l~~~-----~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
++.+.... .+...++++++++|||||.+++..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 54432211 234578999999999999998843
No 155
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.63 E-value=6.9e-16 Score=127.52 Aligned_cols=94 Identities=16% Similarity=0.255 Sum_probs=84.2
Q ss_pred CCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccccc
Q 022810 64 GHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMFEH 142 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~~~l~~ 142 (291)
+.+|||+|||+|.++..+++. +++|+|+.+++.++++ ++.++++|+.+++.+ ++||+|++..++++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-------GVFVLKGTAENLPLKDESFDFALMVTTICF 114 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-------TCEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-------CCEEEEcccccCCCCCCCeeEEEEcchHhh
Confidence 789999999999999887642 9999999999888765 578999999887765 78999999999999
Q ss_pred cccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 143 MKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 143 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+++...+++++.++|+|||.+++..+..
T Consensus 115 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 115 VDDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp SSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ccCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 9999999999999999999999987754
No 156
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.63 E-value=2e-15 Score=125.10 Aligned_cols=108 Identities=19% Similarity=0.361 Sum_probs=91.3
Q ss_pred HHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC--ccC-CC
Q 022810 54 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF--EME-AS 130 (291)
Q Consensus 54 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~--~~~-~~ 130 (291)
.+++.+. .++.+|||+|||+|..+..+++. +.+++++|+|+.+++.++++. ..++.+|+.+. +.+ ++
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~~~~~~~~~~~~~-------~~~~~~d~~~~~~~~~~~~ 93 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKEN--GTRVSGIEAFPEAAEQAKEKL-------DHVVLGDIETMDMPYEEEQ 93 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTT--TCEEEEEESSHHHHHHHHTTS-------SEEEESCTTTCCCCSCTTC
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC-------CcEEEcchhhcCCCCCCCc
Confidence 3444444 57889999999999999999987 589999999999988877542 36889998863 333 78
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022810 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
||+|++..+++|+++...+++++.++|+|||.+++..+...
T Consensus 94 fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 94 FDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVS 134 (230)
T ss_dssp EEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTT
T ss_pred cCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 99999999999999999999999999999999999887653
No 157
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.62 E-value=4.1e-15 Score=127.40 Aligned_cols=115 Identities=18% Similarity=0.200 Sum_probs=98.3
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHh-C--CCCeEEEEccccCCc
Q 022810 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVL-E--LQNVEIIVADISTFE 126 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~p~~~v~~vD~s~~~~~~a~~~~~~~-~--~~~i~~~~~d~~~~~ 126 (291)
....++..+.+.++.+|||+|||+|.++..+++. .|+.+|+++|+++.+++.|++++... + .++++++.+|+.+.+
T Consensus 87 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 87 DAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 3456667778889999999999999999999985 46789999999999999999999887 5 468999999998876
Q ss_pred cC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 127 ME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 127 ~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
.+ ++||+|+++ ++++..+++++.++|+|||.+++..++.
T Consensus 167 ~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 167 LPDGSVDRAVLD-----MLAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp CCTTCEEEEEEE-----SSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred CCCCceeEEEEC-----CcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 54 789999984 3456689999999999999999987754
No 158
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.62 E-value=2.5e-15 Score=128.49 Aligned_cols=114 Identities=19% Similarity=0.162 Sum_probs=96.2
Q ss_pred HHcCCCCCCEEEEEcCCcchHHHHHHHHCCC-CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-----CCC
Q 022810 57 ERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----EAS 130 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~-~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~-----~~~ 130 (291)
..+...++.+|||+|||+|..+..+++..++ .+|+++|+++.+++.++++++..+++++.++++|+.++.. .++
T Consensus 77 ~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~ 156 (274)
T 3ajd_A 77 IVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIF 156 (274)
T ss_dssp HHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCC
T ss_pred HHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhcccc
Confidence 3456778999999999999999999987656 7999999999999999999999988889999999987654 478
Q ss_pred ccEEEEccccccc------------------ccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 131 YDRIYSIEMFEHM------------------KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 131 ~D~v~~~~~l~~~------------------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
||+|+++.+.... .....+++.+.++|||||.+++++.+.
T Consensus 157 fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 157 FDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 9999998554321 345789999999999999999977644
No 159
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.62 E-value=1.6e-15 Score=130.05 Aligned_cols=105 Identities=21% Similarity=0.217 Sum_probs=91.1
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCCccEEEEccc
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEM 139 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~~~~D~v~~~~~ 139 (291)
..++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.|+++++.++++ +++++++|+.+....++||+|+++.+
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~-~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCc
Confidence 35688999999999999999999853 27999999999999999999998885 49999999999876688999999766
Q ss_pred ccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 140 FEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
. +...+++.+.++|+|||.+++.+..+
T Consensus 202 ~----~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 202 V----RTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp S----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred h----hHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 3 33678889999999999999987754
No 160
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.62 E-value=1.5e-15 Score=134.32 Aligned_cols=115 Identities=12% Similarity=0.107 Sum_probs=93.0
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCC
Q 022810 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~~~ 130 (291)
...+++.++..++.+|||||||+|..+..+++.+|+.+++++|+ +.++. +++....+. ++++++.+|+.+ +.+ +
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~-~~p-~ 247 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLR-EVP-H 247 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTT-CCC-C
T ss_pred HHHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCC-CCC-C
Confidence 44566777888889999999999999999999999999999999 44443 222222233 479999999973 334 8
Q ss_pred ccEEEEcccccccccH--HHHHHHHHhccccCeeEEEEeeccC
Q 022810 131 YDRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
||+|++..++|++++. ..++++++++|||||++++.+...+
T Consensus 248 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~ 290 (348)
T 3lst_A 248 ADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVP 290 (348)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBC
T ss_pred CcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 9999999999999877 6999999999999999999776443
No 161
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.62 E-value=1.3e-15 Score=126.15 Aligned_cols=105 Identities=15% Similarity=0.150 Sum_probs=90.0
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC-------CCcc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-------ASYD 132 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~-------~~~D 132 (291)
.++.+|||||||+|..+..+++..| +.+|+++|+++.+++.+++++...++. +++++++|+.+.... ++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 3577999999999999999999876 789999999999999999999998884 599999999664211 6899
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 133 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+|++... ..+...+++.+.++|+|||++++....
T Consensus 143 ~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 143 LIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 9997764 356788999999999999999986543
No 162
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.62 E-value=7.2e-15 Score=121.95 Aligned_cols=110 Identities=24% Similarity=0.283 Sum_probs=92.4
Q ss_pred HHHHHc--CCCCCCEEEEEcCCcchHHHHHHHHC-----CCCEEEEEcCCHHHHHHHHHHHHHhC-----CCCeEEEEcc
Q 022810 54 LYCERS--RLEDGHTVLDVGCGWGSLSLYIAQKY-----SNCKITGICNSKTQKEFIEEQCRVLE-----LQNVEIIVAD 121 (291)
Q Consensus 54 ~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~-----p~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~i~~~~~d 121 (291)
.+++.+ .+.++.+|||||||+|..+..+++.. |..+|+++|+++.+++.|++++...+ .++++++.+|
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 148 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKN 148 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECC
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECC
Confidence 344444 46788999999999999999999885 34699999999999999999998887 5689999999
Q ss_pred ccCCc----cC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 122 ISTFE----ME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 122 ~~~~~----~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+.+.. .. ++||+|++..+++++ ++.+.+.|+|||++++..+.
T Consensus 149 ~~~~~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 149 IYQVNEEEKKELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp GGGCCHHHHHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEEE
T ss_pred hHhcccccCccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEcc
Confidence 98754 33 789999999988765 47788999999999998764
No 163
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.61 E-value=3.4e-15 Score=124.55 Aligned_cols=108 Identities=11% Similarity=0.117 Sum_probs=88.1
Q ss_pred HHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc---cC-CCc
Q 022810 57 ERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE---ME-ASY 131 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~---~~-~~~ 131 (291)
+.+.+.++.+|||+|||+|.++..+++.. |+.+|+|+|+|+.+++.+.++++.. ++++++.+|+.+.. .. ++|
T Consensus 71 ~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~~ 148 (233)
T 2ipx_A 71 DQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKYRMLIAMV 148 (233)
T ss_dssp SCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGGGGGCCCE
T ss_pred heecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhhcccCCcE
Confidence 34567788999999999999999999885 5689999999999988888887765 47999999998732 22 789
Q ss_pred cEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 132 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 132 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
|+|+++.+ .......++.++.++|||||.+++...
T Consensus 149 D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 149 DVIFADVA--QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp EEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 99999765 223335568889999999999999644
No 164
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.61 E-value=2.4e-15 Score=138.05 Aligned_cols=114 Identities=22% Similarity=0.249 Sum_probs=95.8
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCC
Q 022810 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~~~ 130 (291)
.+.+++.+...++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|+++++.+++ ++++++.+|+.+++.+++
T Consensus 147 ~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~ 224 (480)
T 3b3j_A 147 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 224 (480)
T ss_dssp HHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHHHHHhhhhcCCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCC
Confidence 445566665667889999999999999999874 467999999998 99999999999888 589999999998766678
Q ss_pred ccEEEEccccccc--ccHHHHHHHHHhccccCeeEEEEe
Q 022810 131 YDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 131 ~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
||+|+++.+++++ ++....+..+.++|+|||.+++..
T Consensus 225 fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 225 VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp EEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred eEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 9999999887766 445667788899999999998644
No 165
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.61 E-value=6e-15 Score=124.13 Aligned_cols=106 Identities=19% Similarity=0.384 Sum_probs=86.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh--------CCCCeEEEEccccC-Cc--cC-C
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--------ELQNVEIIVADIST-FE--ME-A 129 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~--------~~~~i~~~~~d~~~-~~--~~-~ 129 (291)
.++.+|||||||+|.++..+++.+|+.+|+|+|+|+.+++.+++++... +++++.++++|+.+ ++ .+ +
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 4678999999999999999999988889999999999999999998876 67789999999987 33 33 7
Q ss_pred CccEEEEccccccccc--------HHHHHHHHHhccccCeeEEEEe
Q 022810 130 SYDRIYSIEMFEHMKN--------YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 130 ~~D~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
++|.|+...+-.+... ...+++.+.++|+|||.+++.+
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 8999886543222111 1589999999999999998854
No 166
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.61 E-value=6e-15 Score=126.29 Aligned_cols=112 Identities=19% Similarity=0.176 Sum_probs=96.8
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCC
Q 022810 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEAS 130 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~~~ 130 (291)
..++..+.+.++.+|||+|||+|.++..+++. .|+.+|+++|+++.+++.|++++...++ ++++++.+|+.+....++
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 181 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKD 181 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCS
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCc
Confidence 45666778888999999999999999999998 5678999999999999999999998887 579999999988633378
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
||+|+++ .++...+++.+.++|+|||.+++..+.
T Consensus 182 ~D~V~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 182 VDALFLD-----VPDPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp EEEEEEC-----CSCGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred cCEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9999985 345678999999999999999997754
No 167
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.61 E-value=3.5e-15 Score=130.84 Aligned_cols=107 Identities=19% Similarity=0.136 Sum_probs=90.2
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC--CeEEEEccccCCcc-----CCCccEE
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ--NVEIIVADISTFEM-----EASYDRI 134 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~--~i~~~~~d~~~~~~-----~~~~D~v 134 (291)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++++..++++ +++++++|+.++.. .++||+|
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~--ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA--GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CCCCcEEEcccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 46789999999999999999986 669999999999999999999999885 49999999987542 3689999
Q ss_pred EEccccc----------ccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 135 YSIEMFE----------HMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 135 ~~~~~l~----------~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+++++.. ...+...+++.+.++|+|||.+++...+.
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 9977632 23467889999999999999988876544
No 168
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.60 E-value=1.6e-14 Score=119.75 Aligned_cols=110 Identities=24% Similarity=0.172 Sum_probs=91.0
Q ss_pred HHHHHcC--CCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhC-----CCCeEEEEccccCC
Q 022810 54 LYCERSR--LEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLE-----LQNVEIIVADISTF 125 (291)
Q Consensus 54 ~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~-p~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~i~~~~~d~~~~ 125 (291)
.+++.+. ..++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.+++++...+ .+++.++.+|+...
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG 145 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC
Confidence 4445554 6788999999999999999999874 44799999999999999999988765 35799999999865
Q ss_pred ccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 126 EME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 126 ~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
... ++||+|++..+++++ ++.+.+.|||||++++....
T Consensus 146 ~~~~~~fD~i~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 146 YAEEAPYDAIHVGAAAPVV------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CGGGCCEEEEEECSBBSSC------CHHHHHTEEEEEEEEEEESC
T ss_pred cccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEec
Confidence 443 789999999888665 35788999999999997654
No 169
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.60 E-value=4.9e-15 Score=124.75 Aligned_cols=114 Identities=17% Similarity=0.152 Sum_probs=94.2
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCc
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFE 126 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~ 126 (291)
...+..++.. .++.+|||||||+|..+..+++..| +.+|+++|+++.+++.|++++...++ ++++++.+|+.+..
T Consensus 68 ~~ll~~l~~~---~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l 144 (247)
T 1sui_A 68 GQFLSMLLKL---INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVL 144 (247)
T ss_dssp HHHHHHHHHH---TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred HHHHHHHHHh---hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHH
Confidence 3444444443 3567999999999999999999876 78999999999999999999999888 47999999987642
Q ss_pred --c------CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 127 --M------EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 127 --~------~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
. .++||+|++... ..+...+++.+.++|+|||++++...
T Consensus 145 ~~l~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 145 DEMIKDEKNHGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp HHHHHSGGGTTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred HHHHhccCCCCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 1 368999999754 35678899999999999999988643
No 170
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.59 E-value=7.3e-15 Score=131.08 Aligned_cols=110 Identities=18% Similarity=0.156 Sum_probs=93.7
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCC
Q 022810 52 LELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~ 130 (291)
...+++.+. ..++.+|||||||+|..+..+++++|..+++++|+ +.+++.+++ .++++++.+|+.+ +.+.
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~~- 267 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------LSGIEHVGGDMFA-SVPQ- 267 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CCCC-
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------cCCCEEEeCCccc-CCCC-
Confidence 345666665 66788999999999999999999999899999999 888876653 2479999999987 4444
Q ss_pred ccEEEEcccccccccHH--HHHHHHHhccccCeeEEEEeecc
Q 022810 131 YDRIYSIEMFEHMKNYQ--NLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
||+|++..++|++++.. .++++++++|+|||++++.++..
T Consensus 268 ~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 309 (372)
T 1fp1_D 268 GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFIL 309 (372)
T ss_dssp EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 99999999999998777 99999999999999999987654
No 171
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.59 E-value=7.9e-15 Score=124.04 Aligned_cols=103 Identities=15% Similarity=0.126 Sum_probs=88.0
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcccc
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMF 140 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~l 140 (291)
..++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+++++..++++ +++..+|+.+....++||+|+++...
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~--g~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~~~~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL--GGKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAALPFGPFDLLVANLYA 194 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHHGGGCCEEEEEEECCH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh--CCeEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhcCcCCCCCEEEECCcH
Confidence 467889999999999999999887 459999999999999999999988875 89999998774223789999998665
Q ss_pred cccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 141 EHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+ ....+++.+.++|+|||++++..+.
T Consensus 195 ~---~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 195 E---LHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp H---HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred H---HHHHHHHHHHHHcCCCCEEEEEeec
Confidence 4 3568899999999999999997653
No 172
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.59 E-value=1.6e-14 Score=123.89 Aligned_cols=118 Identities=12% Similarity=0.178 Sum_probs=91.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcC-CHHHHHHHHHHH-----HHhCCC-----CeEE
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICN-SKTQKEFIEEQC-----RVLELQ-----NVEI 117 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~-s~~~~~~a~~~~-----~~~~~~-----~i~~ 117 (291)
..+.+.+.......++.+|||||||+|.++..+++.. ..+|+++|+ |+.+++.+++++ ...++. ++++
T Consensus 65 ~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~ 143 (281)
T 3bzb_A 65 RALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKV 143 (281)
T ss_dssp HHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEE
T ss_pred HHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEE
Confidence 4455555554444678899999999999999988762 349999999 899999999998 555543 6888
Q ss_pred EEccccCCc-------cCCCccEEEEcccccccccHHHHHHHHHhccc---c--CeeEEEEe
Q 022810 118 IVADISTFE-------MEASYDRIYSIEMFEHMKNYQNLLKKISKWMK---E--DTLLFVHH 167 (291)
Q Consensus 118 ~~~d~~~~~-------~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~---p--gG~l~i~~ 167 (291)
...|+.+.. ..++||+|++..++++.++...+++.+.++|+ | ||.+++..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 144 VPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp EECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred EEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 877765421 13689999999999999999999999999999 9 99887753
No 173
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.59 E-value=8.8e-15 Score=127.57 Aligned_cols=114 Identities=16% Similarity=0.096 Sum_probs=94.1
Q ss_pred HHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-CCCccE
Q 022810 56 CERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-EASYDR 133 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~-~~~~D~ 133 (291)
...+...++.+|||+|||+|..+..+++..+ +.+|+++|+|+.+++.+++++...++++++++++|+.+++. .++||+
T Consensus 111 ~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~ 190 (315)
T 1ixk_A 111 PVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDK 190 (315)
T ss_dssp HHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEE
T ss_pred HHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCE
Confidence 3445678899999999999999999998864 47999999999999999999999998789999999988754 378999
Q ss_pred EEEcccc------ccccc----------------HHHHHHHHHhccccCeeEEEEeec
Q 022810 134 IYSIEMF------EHMKN----------------YQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 134 v~~~~~l------~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
|+++.+. ...++ ...+++++.++|||||++++++.+
T Consensus 191 Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 191 ILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp EEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 9996542 21111 258999999999999999987654
No 174
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.59 E-value=1.1e-14 Score=120.98 Aligned_cols=106 Identities=17% Similarity=0.156 Sum_probs=86.5
Q ss_pred HHHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc----cCCC
Q 022810 56 CERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----MEAS 130 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~----~~~~ 130 (291)
++.+.+.++.+|||+|||+|.++..+++.. |+.+|+++|+|+.+++.++++++.. ++++++++|+.+.. .+++
T Consensus 66 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~ 143 (227)
T 1g8a_A 66 LKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYRALVPK 143 (227)
T ss_dssp CCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGTTTCCC
T ss_pred HHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhhcccCC
Confidence 334446788999999999999999999874 4589999999999999998887654 48999999998732 2368
Q ss_pred ccEEEEcccccccccH-HHHHHHHHhccccCeeEEEE
Q 022810 131 YDRIYSIEMFEHMKNY-QNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~~-~~~l~~~~~~L~pgG~l~i~ 166 (291)
||+|++..+ .++. ..++.++.++|||||.+++.
T Consensus 144 ~D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 144 VDVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 999998765 2333 34599999999999999887
No 175
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.59 E-value=2.6e-14 Score=120.05 Aligned_cols=111 Identities=15% Similarity=0.160 Sum_probs=95.7
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCc-cCCC
Q 022810 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFE-MEAS 130 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~-~~~~ 130 (291)
..++..+.+.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|+++....++ +++++..+|+.+.. ..++
T Consensus 81 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 158 (248)
T 2yvl_A 81 FYIALKLNLNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGI 158 (248)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTC
T ss_pred HHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCc
Confidence 45566677788999999999999999999988 78999999999999999999988887 58999999998865 3378
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
||+|+++ .++...+++.+.++|+|||.+++..+..
T Consensus 159 ~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 159 FHAAFVD-----VREPWHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp BSEEEEC-----SSCGGGGHHHHHHHBCTTCEEEEEESSH
T ss_pred ccEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 9999984 3456688999999999999999987643
No 176
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.58 E-value=7.1e-15 Score=130.28 Aligned_cols=102 Identities=31% Similarity=0.402 Sum_probs=86.8
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCCccEEEEccc-
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDRIYSIEM- 139 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~~~~D~v~~~~~- 139 (291)
.++.+|||||||+|.++..+++.. ..+|++||.|+ +++.|+++++.+++ ++|+++.+|++++..++++|+|++..+
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~ 159 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMG 159 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCB
T ss_pred cCCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeeccc
Confidence 468899999999999998888763 45899999986 88999999999998 579999999999888889999999543
Q ss_pred --ccccccHHHHHHHHHhccccCeeEEE
Q 022810 140 --FEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 140 --l~~~~~~~~~l~~~~~~L~pgG~l~i 165 (291)
+.+-.....++....++|+|||.++-
T Consensus 160 ~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 160 YGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccccchhhhHHHHHHhhCCCCceECC
Confidence 33335678899999999999999764
No 177
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.58 E-value=1.1e-14 Score=127.60 Aligned_cols=106 Identities=23% Similarity=0.325 Sum_probs=89.6
Q ss_pred HcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC-CCccEEE
Q 022810 58 RSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME-ASYDRIY 135 (291)
Q Consensus 58 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~-~~~D~v~ 135 (291)
.+...++.+|||||||+|.++..+++. +..+|+|+|+| .+++.|+++++.+++ ++++++.+|+.+.+.+ ++||+|+
T Consensus 33 ~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv 110 (328)
T 1g6q_1 33 NKDLFKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIII 110 (328)
T ss_dssp HHHHHTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEE
T ss_pred hHhhcCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEE
Confidence 334457889999999999999999976 34599999999 599999999998888 4699999999998766 8899999
Q ss_pred Ecccccc---cccHHHHHHHHHhccccCeeEEE
Q 022810 136 SIEMFEH---MKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 136 ~~~~l~~---~~~~~~~l~~~~~~L~pgG~l~i 165 (291)
+..+.+. ......++..+.++|+|||.++.
T Consensus 111 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 111 SEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp ECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 9865443 35678899999999999999874
No 178
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.58 E-value=1.1e-14 Score=120.99 Aligned_cols=112 Identities=18% Similarity=0.118 Sum_probs=91.9
Q ss_pred HHHHHHHc--CCCCCCEEEEEcCCcchHHHHHHHHCC------CCEEEEEcCCHHHHHHHHHHHHHhC-----CCCeEEE
Q 022810 52 LELYCERS--RLEDGHTVLDVGCGWGSLSLYIAQKYS------NCKITGICNSKTQKEFIEEQCRVLE-----LQNVEII 118 (291)
Q Consensus 52 ~~~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~p------~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~i~~~ 118 (291)
...+++.+ .+.++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+++++...+ .++++++
T Consensus 71 ~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 150 (227)
T 1r18_A 71 HAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIV 150 (227)
T ss_dssp HHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEE
Confidence 34455555 367889999999999999999998653 2599999999999999999988765 4589999
Q ss_pred EccccCCccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 119 VADISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 119 ~~d~~~~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
.+|+.+.... ++||+|++..+++++. +.+.+.|||||++++....
T Consensus 151 ~~d~~~~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 151 EGDGRKGYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp ESCGGGCCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred ECCcccCCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEec
Confidence 9999873333 7899999999988764 6789999999999997654
No 179
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.58 E-value=5.1e-15 Score=121.45 Aligned_cols=102 Identities=19% Similarity=0.207 Sum_probs=87.9
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCC-cc-CCCccEEEEcc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTF-EM-EASYDRIYSIE 138 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~-~~-~~~~D~v~~~~ 138 (291)
++.+|||||||+|..+..+++..| +.+|+++|+|+.+++.|++++...++. +++++.+|+.+. +. ++ ||+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 567999999999999999998876 789999999999999999999888873 699999999764 22 26 99999974
Q ss_pred cccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 139 MFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 139 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
. ..+...+++.+.++|+|||++++...
T Consensus 135 ~---~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 135 D---VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp T---TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred C---hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 3 35778999999999999999988654
No 180
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.58 E-value=5.3e-15 Score=125.97 Aligned_cols=104 Identities=15% Similarity=0.209 Sum_probs=83.7
Q ss_pred CCCEEEEEcCCcch----HHHHHHHHCC----CCEEEEEcCCHHHHHHHHHHHHH-----------------------hC
Q 022810 63 DGHTVLDVGCGWGS----LSLYIAQKYS----NCKITGICNSKTQKEFIEEQCRV-----------------------LE 111 (291)
Q Consensus 63 ~~~~vLDiGcG~G~----~~~~l~~~~p----~~~v~~vD~s~~~~~~a~~~~~~-----------------------~~ 111 (291)
++.+|||+|||+|. ++..+++..+ +.+|+|+|+|+.+++.|+++... .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 5666776643 46999999999999999986410 01
Q ss_pred -------C-CCeEEEEccccCCccC--CCccEEEEcccccccccH--HHHHHHHHhccccCeeEEEE
Q 022810 112 -------L-QNVEIIVADISTFEME--ASYDRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 112 -------~-~~i~~~~~d~~~~~~~--~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~ 166 (291)
+ ++|.|.++|+.+.+.+ ++||+|+|.+++.++++. .++++++++.|+|||+|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 0 2689999999885433 789999999999999544 78999999999999999883
No 181
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.58 E-value=1.4e-14 Score=129.03 Aligned_cols=111 Identities=18% Similarity=0.198 Sum_probs=91.4
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCC
Q 022810 52 LELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~ 130 (291)
...+++.+. ..+..+|||||||+|..+..+++.+|+.+++++|+ +.+++.+++ .++++++.+|+.+ +.+..
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~p~~ 262 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA------FSGVEHLGGDMFD-GVPKG 262 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CCCCC
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh------cCCCEEEecCCCC-CCCCC
Confidence 344555555 66788999999999999999999999999999999 887766643 2479999999987 44444
Q ss_pred ccEEEEcccccccccH--HHHHHHHHhccccCeeEEEEeeccC
Q 022810 131 YDRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
|+|++..++|++++. ..++++++++|+|||++++.+...+
T Consensus 263 -D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 263 -DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp -SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred -CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 999999999988654 5799999999999999999876543
No 182
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.58 E-value=5.7e-15 Score=117.27 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=79.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccccc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFE 141 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~l~ 141 (291)
.++.+|||+|||+|.++..+++. + +|+|+|+|+.+++. .++++++++|+.+....++||+|+++.+++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~--~-~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~ 89 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR--N-TVVSTDLNIRALES---------HRGGNLVRADLLCSINQESVDVVVFNPPYV 89 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT--S-EEEEEESCHHHHHT---------CSSSCEEECSTTTTBCGGGCSEEEECCCCB
T ss_pred CCCCeEEEeccCccHHHHHHHhc--C-cEEEEECCHHHHhc---------ccCCeEEECChhhhcccCCCCEEEECCCCc
Confidence 45679999999999999999987 5 99999999998876 237899999998843338999999999988
Q ss_pred cccc---------HHHHHHHHHhccccCeeEEEEeecc
Q 022810 142 HMKN---------YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 142 ~~~~---------~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+.++ ...+++++.+.| |||.+++..+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~ 126 (170)
T 3q87_B 90 PDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA 126 (170)
T ss_dssp TTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG
T ss_pred cCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC
Confidence 6543 357888888888 999999977544
No 183
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.57 E-value=8.9e-15 Score=122.51 Aligned_cols=105 Identities=18% Similarity=0.165 Sum_probs=89.4
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCcc-----------
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM----------- 127 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~----------- 127 (291)
..++.+|||||||+|..+..+++..| +.+|+++|+++.+++.|++++...+.. +++++.+|+.+...
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 34678999999999999999999876 689999999999999999999988874 59999999866311
Q ss_pred ------C-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 128 ------E-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 128 ------~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
. ++||+|++.... ++...+++.+.+.|+|||++++...
T Consensus 138 ~~~f~~~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDADK---ENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp GTTTCCSTTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred cccccCCCCCcCEEEEeCCH---HHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 2 679999998543 5667899999999999999998654
No 184
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.57 E-value=8.9e-15 Score=137.38 Aligned_cols=107 Identities=21% Similarity=0.306 Sum_probs=89.9
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--cC-CCccEEEEcc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--ME-ASYDRIYSIE 138 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~--~~-~~~D~v~~~~ 138 (291)
..+.+|||||||+|.++..|+++ |++|+|||+++.+++.|+..+.+.+.-++++.+++++++. .. ++||+|+|..
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc
Confidence 35689999999999999999988 8999999999999999999998877547999999999873 22 7899999999
Q ss_pred cccccccHHHH--HHHHHhccccCeeEEEEeecc
Q 022810 139 MFEHMKNYQNL--LKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 139 ~l~~~~~~~~~--l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+++|++++..+ +..+.+.|+++|..++..+..
T Consensus 143 ~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 143 VFHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp CHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred chhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 99999876543 446677788988877655543
No 185
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.57 E-value=1.2e-14 Score=115.26 Aligned_cols=107 Identities=14% Similarity=0.128 Sum_probs=87.5
Q ss_pred HHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc----
Q 022810 53 ELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE---- 126 (291)
Q Consensus 53 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~---- 126 (291)
..+++.+. ..++.+|||+|||+|..+..+++.+ ++.+++++|+++ +++. .+++++.+|+.+.+
T Consensus 11 ~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~ 79 (180)
T 1ej0_A 11 DEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKA 79 (180)
T ss_dssp HHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHH
T ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhh
Confidence 34445444 5678899999999999999999884 568999999999 6432 47999999998865
Q ss_pred ----cC-CCccEEEEcccccccccH-----------HHHHHHHHhccccCeeEEEEeecc
Q 022810 127 ----ME-ASYDRIYSIEMFEHMKNY-----------QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 127 ----~~-~~~D~v~~~~~l~~~~~~-----------~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
.+ ++||+|+++.++++..+. ..+++.+.++|+|||.+++..+..
T Consensus 80 ~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 80 LLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp HHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred hhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 44 789999999988776554 689999999999999999977654
No 186
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.56 E-value=1.7e-14 Score=120.69 Aligned_cols=114 Identities=18% Similarity=0.164 Sum_probs=94.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCc
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFE 126 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~ 126 (291)
...+..++.. .++.+|||||||+|..+..+++..| +.+|+++|+++.+++.|++++...++. +++++.+|+.+..
T Consensus 59 ~~~l~~l~~~---~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l 135 (237)
T 3c3y_A 59 GQLMSFVLKL---VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLAL 135 (237)
T ss_dssp HHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred HHHHHHHHHh---hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 3444554443 3567999999999999999999876 789999999999999999999998884 6999999987642
Q ss_pred --c------CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 127 --M------EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 127 --~------~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
. .++||+|++... ..+...+++.+.++|+|||++++...
T Consensus 136 ~~l~~~~~~~~~fD~I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 136 DNLLQGQESEGSYDFGFVDAD---KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp HHHHHSTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred HHHHhccCCCCCcCEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 1 368999998754 35678899999999999999988644
No 187
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.56 E-value=2.6e-14 Score=127.06 Aligned_cols=111 Identities=18% Similarity=0.143 Sum_probs=92.5
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCC
Q 022810 52 LELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~ 130 (291)
...+++.+. ..+..+|||||||+|..+..+++++|+.+++++|+ +.+++.+++ .++++++.+|+.+ +.+..
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~D~~~-~~p~~ 260 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ------FPGVTHVGGDMFK-EVPSG 260 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CCCCC
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh------cCCeEEEeCCcCC-CCCCC
Confidence 445666665 67788999999999999999999999999999999 887766553 2489999999987 54544
Q ss_pred ccEEEEccccccccc--HHHHHHHHHhccccCeeEEEEeeccC
Q 022810 131 YDRIYSIEMFEHMKN--YQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
|+|++..++|++++ ...+|+++++.|+|||++++.+...+
T Consensus 261 -D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 261 -DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp -SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred -CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 99999999998854 56899999999999999999876543
No 188
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.56 E-value=1.4e-14 Score=124.92 Aligned_cols=109 Identities=12% Similarity=0.070 Sum_probs=84.9
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhC-----CCCeEEEEccccCCcc--CCCccEE
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE-----LQNVEIIVADISTFEM--EASYDRI 134 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~i~~~~~d~~~~~~--~~~~D~v 134 (291)
.++.+|||||||+|..+..+++..+..+|++||+|+.+++.|++++...+ .++++++.+|+.+... .++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 45789999999999999999987667899999999999999999887542 2479999999987542 2789999
Q ss_pred EEccccccccc----HHHHHHHHHhccccCeeEEEEeecc
Q 022810 135 YSIEMFEHMKN----YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 135 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+++......+. ...+++.+.++|+|||++++...++
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~ 201 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEEEC
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCc
Confidence 99765432222 1679999999999999999976543
No 189
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.55 E-value=1.3e-14 Score=121.01 Aligned_cols=104 Identities=12% Similarity=0.184 Sum_probs=88.7
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCc----c-C--CCccE
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFE----M-E--ASYDR 133 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~----~-~--~~~D~ 133 (291)
++.+|||||||+|..+..+++..| +.+|+++|+++.+++.|++++...++ ++++++.+|+.+.. . . ++||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 567999999999999999998876 67999999999999999999998888 46999999976531 1 1 67999
Q ss_pred EEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 134 IYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 134 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
|++... ..++..+++.+.++|+|||++++....
T Consensus 152 V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 152 IFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp EEECSC---GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred EEECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 998765 356788999999999999999986543
No 190
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.55 E-value=2.4e-14 Score=121.81 Aligned_cols=98 Identities=19% Similarity=0.239 Sum_probs=84.3
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 140 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~~~l 140 (291)
.++.+|||+|||+|.++..+++..|+.+|+|+|+|+.+++.++++. .++.+..+|+.+++.+ ++||+|++..+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~~ 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLPFSDTSMDAIIRIYAP 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCSBCTTCEEEEEEESCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCCCCCCceeEEEEeCCh
Confidence 5678999999999999999998877889999999999999887653 3688999999887765 789999987653
Q ss_pred cccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022810 141 EHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
..++++.++|||||.+++.++...
T Consensus 159 -------~~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 159 -------CKAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp -------CCHHHHHHHEEEEEEEEEEEECTT
T ss_pred -------hhHHHHHHhcCCCcEEEEEEcCHH
Confidence 357899999999999999888654
No 191
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.55 E-value=1.5e-14 Score=120.05 Aligned_cols=104 Identities=13% Similarity=0.111 Sum_probs=89.0
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC-------CCcc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME-------ASYD 132 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~-------~~~D 132 (291)
.++.+|||+|||+|..+..+++..+ +.+|+++|+++.+++.|++++...++ ++++++.+|+.+.... ++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 4678999999999999999998876 68999999999999999999998887 5799999998664211 5799
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 133 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
+|++... ..+...+++.+.++|+|||++++...
T Consensus 148 ~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 148 VAVVDAD---KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEEECSC---STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 9999765 35667899999999999999988654
No 192
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.55 E-value=2.7e-14 Score=125.64 Aligned_cols=113 Identities=19% Similarity=0.285 Sum_probs=90.7
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHhC-----------CCCeEEEE
Q 022810 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVLE-----------LQNVEIIV 119 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~p~~~v~~vD~s~~~~~~a~~~~~~~~-----------~~~i~~~~ 119 (291)
...++..+.+.++.+|||+|||+|.++..+++. .|..+|+++|+++.+++.|++++...+ .++++++.
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 445566667889999999999999999999987 455899999999999999999988642 24799999
Q ss_pred ccccCCc--cC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 120 ADISTFE--ME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 120 ~d~~~~~--~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+|+.+.. .+ ++||+|+++.. ++..+++.+.++|+|||.+++..++
T Consensus 174 ~d~~~~~~~~~~~~fD~V~~~~~-----~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 174 KDISGATEDIKSLTFDAVALDML-----NPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp SCTTCCC-------EEEEEECSS-----STTTTHHHHGGGEEEEEEEEEEESS
T ss_pred CChHHcccccCCCCeeEEEECCC-----CHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9998863 23 67999998643 3445899999999999999987653
No 193
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.55 E-value=1.5e-14 Score=128.11 Aligned_cols=102 Identities=15% Similarity=0.198 Sum_probs=88.0
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccc
Q 022810 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEM 139 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~ 139 (291)
...++.+|||||||+|..+..+++++|+.+++++|+ +.+++.+++ .++++++.+|+.+ +.+ .||+|++..+
T Consensus 185 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~p-~~D~v~~~~~ 255 (352)
T 1fp2_A 185 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------SNNLTYVGGDMFT-SIP-NADAVLLKYI 255 (352)
T ss_dssp HHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------BTTEEEEECCTTT-CCC-CCSEEEEESC
T ss_pred ccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------CCCcEEEeccccC-CCC-CccEEEeehh
Confidence 345678999999999999999999999999999999 998877654 2369999999976 333 4999999999
Q ss_pred ccccccHH--HHHHHHHhcccc---CeeEEEEeecc
Q 022810 140 FEHMKNYQ--NLLKKISKWMKE---DTLLFVHHFCH 170 (291)
Q Consensus 140 l~~~~~~~--~~l~~~~~~L~p---gG~l~i~~~~~ 170 (291)
+|++++.. .++++++++||| ||++++.++..
T Consensus 256 lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 256 LHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp GGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred hccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 99998777 999999999999 99999987654
No 194
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.55 E-value=2.9e-14 Score=117.48 Aligned_cols=105 Identities=12% Similarity=0.035 Sum_probs=88.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC-CCccEEEEccc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-ASYDRIYSIEM 139 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~-~~~D~v~~~~~ 139 (291)
+++.+|||||||+|.+++.+++..|..+|+++|+++.+++.|+++++.+++. ++++..+|..+...+ .+||+|+..++
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~ 93 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGM 93 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCC
Confidence 4678999999999999999999877779999999999999999999999985 699999999653333 37999987665
Q ss_pred ccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 140 FEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
-. .-...++....+.|+|+|+++++..
T Consensus 94 Gg--~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 94 GG--RLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp CH--HHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred Ch--HHHHHHHHHHHHHhCCCCEEEEECC
Confidence 32 2257789999999999999888654
No 195
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.55 E-value=9.9e-14 Score=115.11 Aligned_cols=105 Identities=14% Similarity=0.078 Sum_probs=82.5
Q ss_pred cCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----CCCccE
Q 022810 59 SRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----EASYDR 133 (291)
Q Consensus 59 ~~~~~~~~vLDiGcG~G~~~~~l~~~~-p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----~~~~D~ 133 (291)
+.++++.+|||+|||+|..+..+++.. |..+|+++|+++.+++.+.+.++.. .++.++++|+..... .++||+
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~~~~~~~D~ 149 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYKSVVENVDV 149 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTTTTCCCEEE
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhhccccceEE
Confidence 447899999999999999999999874 5679999999999986665555443 489999999976431 268999
Q ss_pred EEEcccccccccHHHHH-HHHHhccccCeeEEEEee
Q 022810 134 IYSIEMFEHMKNYQNLL-KKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 134 v~~~~~l~~~~~~~~~l-~~~~~~L~pgG~l~i~~~ 168 (291)
|+++.+. ++....+ ..+.+.|||||.|++...
T Consensus 150 I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 150 LYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp EEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 9998654 4555544 456669999999998743
No 196
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.54 E-value=3.3e-14 Score=115.61 Aligned_cols=105 Identities=19% Similarity=0.261 Sum_probs=82.2
Q ss_pred HHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCC--CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc----
Q 022810 54 LYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYS--NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE---- 126 (291)
Q Consensus 54 ~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~p--~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~---- 126 (291)
.+.+... +.++.+|||+|||+|..+..++++.+ +.+|+|+|+|+.. ..++++++++|+.+..
T Consensus 12 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~ 80 (201)
T 2plw_A 12 ELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNI 80 (201)
T ss_dssp HHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC
T ss_pred HHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhh
Confidence 3444444 46788999999999999999999886 6899999999841 2347899999998765
Q ss_pred ---------------------cC-CCccEEEEccccccc----ccH-------HHHHHHHHhccccCeeEEEEeec
Q 022810 127 ---------------------ME-ASYDRIYSIEMFEHM----KNY-------QNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 127 ---------------------~~-~~~D~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
.+ ++||+|+++.++++. .+. ..+++.+.++|+|||.+++..+.
T Consensus 81 ~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 81 KNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp -----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 34 689999998877653 222 24788999999999999987654
No 197
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.54 E-value=1.3e-14 Score=120.41 Aligned_cols=90 Identities=12% Similarity=0.200 Sum_probs=78.2
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcccc-CCcc--CCCccEEEEcc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIS-TFEM--EASYDRIYSIE 138 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~-~~~~--~~~~D~v~~~~ 138 (291)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++ .++++++++|+. .++. .++||+|+++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~~~~~fD~v~~~- 118 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELPAGLGAPFGLIVSR- 118 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCCTTCCCCEEEEEEE-
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccCCcCCCCEEEEEeC-
Confidence 57889999999999999999988 78999999999999999877 337999999994 4443 3789999997
Q ss_pred cccccccHHHHHHHHHhccccCeeEE
Q 022810 139 MFEHMKNYQNLLKKISKWMKEDTLLF 164 (291)
Q Consensus 139 ~l~~~~~~~~~l~~~~~~L~pgG~l~ 164 (291)
.+...+++++.++|||||.++
T Consensus 119 -----~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 119 -----RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp -----SCCSGGGGGHHHHEEEEEEEE
T ss_pred -----CCHHHHHHHHHHHcCCCcEEE
Confidence 356788999999999999988
No 198
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.54 E-value=3.9e-14 Score=116.90 Aligned_cols=105 Identities=14% Similarity=0.055 Sum_probs=89.7
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC-CCccEEEEccc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-ASYDRIYSIEM 139 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~-~~~D~v~~~~~ 139 (291)
+++.+|||||||+|.+++.+++..|..+|+++|+++.+++.|+++++.+++. ++++.++|..+...+ ++||+|+..++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 4678999999999999999999876678999999999999999999999984 699999999886555 47999887665
Q ss_pred ccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 140 FEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
.. .-...++....+.|+++|.|+++..
T Consensus 100 Gg--~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 100 GG--RLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp CH--HHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred ch--HHHHHHHHHHHHHhCcCCEEEEECC
Confidence 43 2356788888999999999888764
No 199
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.54 E-value=3.1e-14 Score=123.07 Aligned_cols=107 Identities=16% Similarity=0.139 Sum_probs=87.2
Q ss_pred CCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--c-CCCccEEEEcccc
Q 022810 64 GHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--M-EASYDRIYSIEMF 140 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~--~-~~~~D~v~~~~~l 140 (291)
..+|||||||+|.++..+++.+|+.++++||+++.+++.|++++.....++++++.+|+.++. . .++||+|++....
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 349999999999999999998889999999999999999999875433358999999998753 2 2789999997543
Q ss_pred ccc-c---cHHHHHHHHHhccccCeeEEEEeecc
Q 022810 141 EHM-K---NYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 141 ~~~-~---~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
... + ...++++.++++|+|||++++.....
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 221 1 12689999999999999999877643
No 200
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.53 E-value=3.5e-14 Score=123.14 Aligned_cols=110 Identities=13% Similarity=0.040 Sum_probs=86.3
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh----CCCCeEEEEccccCCcc---CCCcc
Q 022810 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL----ELQNVEIIVADISTFEM---EASYD 132 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~----~~~~i~~~~~d~~~~~~---~~~~D 132 (291)
...++.+|||||||+|..+..+++..+..+|+++|+|+.+++.+++++... ..++++++.+|+.+... .++||
T Consensus 92 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 92 SHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred cCCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCcee
Confidence 345678999999999999999998766689999999999999999887431 12479999999987642 37899
Q ss_pred EEEEcccccccccH----HHHHHHHHhccccCeeEEEEeec
Q 022810 133 RIYSIEMFEHMKNY----QNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 133 ~v~~~~~l~~~~~~----~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+|+++.+....+.. ..+++.+.++|+|||++++...+
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 99998766443322 68999999999999999987543
No 201
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.53 E-value=4.8e-14 Score=117.33 Aligned_cols=105 Identities=11% Similarity=0.061 Sum_probs=89.2
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC-CCccEEEEccc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-ASYDRIYSIEM 139 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~-~~~D~v~~~~~ 139 (291)
+++.+|||||||+|.+++.+++..|..+|+++|+++.+++.|++++..+++. ++++.++|..+...+ .+||+|++.++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm 99 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM 99 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCC
Confidence 5778999999999999999999876678999999999999999999999984 699999999886555 36999987655
Q ss_pred ccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 140 FEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
.. .-...++....+.|+++|.|+++..
T Consensus 100 Gg--~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 100 GG--TLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp CH--HHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred ch--HHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 42 2356788889999999999888754
No 202
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.52 E-value=3.5e-13 Score=120.22 Aligned_cols=106 Identities=10% Similarity=0.066 Sum_probs=89.9
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC-Ccc--CCCccEEEEc
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FEM--EASYDRIYSI 137 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~-~~~--~~~~D~v~~~ 137 (291)
..++.+|||+| |+|.++..++...+..+|+++|+|+.+++.|++++...++++++++++|+.+ ++. .++||+|+++
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITD 248 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEEC
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEEC
Confidence 34678999999 9999999999886668999999999999999999999888789999999988 543 2689999999
Q ss_pred ccccccccHHHHHHHHHhccccCeeE-EEEee
Q 022810 138 EMFEHMKNYQNLLKKISKWMKEDTLL-FVHHF 168 (291)
Q Consensus 138 ~~l~~~~~~~~~l~~~~~~L~pgG~l-~i~~~ 168 (291)
.+++.. ....+++++.++|+|||.+ ++...
T Consensus 249 ~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 249 PPETLE-AIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp CCSSHH-HHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred CCCchH-HHHHHHHHHHHHcccCCeEEEEEEe
Confidence 877544 3578999999999999954 55443
No 203
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.52 E-value=4.2e-14 Score=120.34 Aligned_cols=105 Identities=21% Similarity=0.217 Sum_probs=90.1
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCCccEEEEccc
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDRIYSIEM 139 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~~~~D~v~~~~~ 139 (291)
..+|.+|||+|||+|.+++.+++.. .++|+++|+|+.+++.+++|++.+++ ++++++++|+.++...+.||.|+++.+
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCC
Confidence 3579999999999999999999873 57999999999999999999999998 469999999999876688999999865
Q ss_pred ccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 140 FEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
.. ...++..+.++|+|||++.+....+
T Consensus 202 ~~----~~~~l~~a~~~lk~gG~ih~~~~~~ 228 (278)
T 3k6r_A 202 VR----THEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp SS----GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred Cc----HHHHHHHHHHHcCCCCEEEEEeeec
Confidence 43 3457777889999999988766544
No 204
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.51 E-value=5.9e-14 Score=120.61 Aligned_cols=113 Identities=14% Similarity=0.236 Sum_probs=89.5
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCcc
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM 127 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~ 127 (291)
...++.+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...+. ++++++++|+.+.+.
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~ 91 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL 91 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc
Confidence 456677788888888999999999999999999998 67999999999999999998876655 579999999988755
Q ss_pred CCCccEEEEcccccccccH-HHHHH--------------HH--HhccccCeeEE
Q 022810 128 EASYDRIYSIEMFEHMKNY-QNLLK--------------KI--SKWMKEDTLLF 164 (291)
Q Consensus 128 ~~~~D~v~~~~~l~~~~~~-~~~l~--------------~~--~~~L~pgG~l~ 164 (291)
+ +||+|+++.+++..... ..++. ++ +++|+|||.++
T Consensus 92 ~-~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 92 P-FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp C-CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred h-hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 4 79999998776544321 12222 22 35889999864
No 205
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.51 E-value=1.7e-13 Score=125.16 Aligned_cols=115 Identities=16% Similarity=0.159 Sum_probs=95.5
Q ss_pred HHHcCCCCCCEEEEEcCCcchHHHHHHHHCCC-CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--cC-CCc
Q 022810 56 CERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--ME-ASY 131 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~-~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~--~~-~~~ 131 (291)
...+...++.+|||+|||+|..+..+++..++ .+|+++|+++.+++.+++++...+++++.++++|+.+.+ .+ ++|
T Consensus 252 ~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~f 331 (450)
T 2yxl_A 252 SIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVA 331 (450)
T ss_dssp HHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCE
T ss_pred HHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCC
Confidence 34456788999999999999999999998766 799999999999999999999998888999999998875 33 679
Q ss_pred cEEEEccc------ccccccH----------------HHHHHHHHhccccCeeEEEEeecc
Q 022810 132 DRIYSIEM------FEHMKNY----------------QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 132 D~v~~~~~------l~~~~~~----------------~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
|+|+++.+ +...++. ..+++.+.++|||||.+++.+.+.
T Consensus 332 D~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 332 DKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp EEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99998543 2222222 578999999999999999877654
No 206
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.50 E-value=4.3e-14 Score=118.18 Aligned_cols=98 Identities=16% Similarity=0.245 Sum_probs=81.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHH----CCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC---cc-C-CCccE
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQK----YSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF---EM-E-ASYDR 133 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~----~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~---~~-~-~~~D~ 133 (291)
++.+|||||||+|..+..+++. .|+.+|+++|+++.+++.|+ ... ++++++++|+.+. +. . .+||+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~-~~v~~~~gD~~~~~~l~~~~~~~fD~ 155 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDM-ENITLHQGDCSDLTTFEHLREMAHPL 155 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGC-TTEEEEECCSSCSGGGGGGSSSCSSE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccC-CceEEEECcchhHHHHHhhccCCCCE
Confidence 4679999999999999999987 57899999999999988776 122 4799999999884 32 2 37999
Q ss_pred EEEcccccccccHHHHHHHHHh-ccccCeeEEEEee
Q 022810 134 IYSIEMFEHMKNYQNLLKKISK-WMKEDTLLFVHHF 168 (291)
Q Consensus 134 v~~~~~l~~~~~~~~~l~~~~~-~L~pgG~l~i~~~ 168 (291)
|++... | .+...++.++.+ +|||||++++.+.
T Consensus 156 I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 156 IFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 998765 2 367889999997 9999999998654
No 207
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.50 E-value=5.6e-14 Score=124.15 Aligned_cols=108 Identities=15% Similarity=0.245 Sum_probs=84.9
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCC------cchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcccc
Q 022810 51 MLELYCERSRLEDGHTVLDVGCG------WGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIS 123 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG------~G~~~~~l~~~-~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~ 123 (291)
.++.++..+. .++.+||||||| +|..+..+++. +|+.+|+|+|+|+.+. ...++++++++|+.
T Consensus 205 ~Ye~lL~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~ 274 (419)
T 3sso_A 205 HYDRHFRDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQN 274 (419)
T ss_dssp HHHHHHGGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTT
T ss_pred HHHHHHHhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEeccc
Confidence 3445555443 346899999999 66666666655 5889999999999972 12248999999999
Q ss_pred CCccC-------CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 124 TFEME-------ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 124 ~~~~~-------~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+++.. ++||+|+++.+ ++..+....|+++.++|||||++++.+..
T Consensus 275 dlpf~~~l~~~d~sFDlVisdgs-H~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 275 DAEFLDRIARRYGPFDIVIDDGS-HINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CHHHHHHHHHHHCCEEEEEECSC-CCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ccchhhhhhcccCCccEEEECCc-ccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 86533 78999999754 56788899999999999999999998765
No 208
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.49 E-value=1.9e-13 Score=120.65 Aligned_cols=110 Identities=11% Similarity=0.063 Sum_probs=92.1
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCC-----CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEE
Q 022810 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSN-----CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRI 134 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~l~~~~p~-----~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v 134 (291)
...++.+|||+|||+|.++..+++..+. .+++|+|+++.+++.|+.++...++ ++.++++|........+||+|
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~~~~~fD~I 205 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANLLVDPVDVV 205 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCCCCCCEEEE
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCccccCCccEE
Confidence 3446789999999999999999887543 7899999999999999999988887 789999998775444789999
Q ss_pred EEcccccccccH------------------HHHHHHHHhccccCeeEEEEeecc
Q 022810 135 YSIEMFEHMKNY------------------QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 135 ~~~~~l~~~~~~------------------~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
++++++.+++.. ..+++++.+.|+|||++++..+..
T Consensus 206 i~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 206 ISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp EEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred EECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 999997665321 258999999999999999988654
No 209
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.49 E-value=9.6e-14 Score=124.21 Aligned_cols=106 Identities=21% Similarity=0.195 Sum_probs=91.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-----CCCccEEEEc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----EASYDRIYSI 137 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~-----~~~~D~v~~~ 137 (291)
++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|++++..+++++++++++|+.+... ..+||+|+++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 6789999999999999999987 67999999999999999999999998779999999987532 3689999998
Q ss_pred cccccc---------ccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 138 EMFEHM---------KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 138 ~~l~~~---------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
++.... .+...++..+.++|+|||.+++.+...
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 765322 456789999999999999999877543
No 210
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.49 E-value=1.5e-13 Score=120.41 Aligned_cols=109 Identities=16% Similarity=0.174 Sum_probs=87.5
Q ss_pred cCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh--CC--CCeEEEEccccCCc--c-CCCc
Q 022810 59 SRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--EL--QNVEIIVADISTFE--M-EASY 131 (291)
Q Consensus 59 ~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~--~~--~~i~~~~~d~~~~~--~-~~~~ 131 (291)
+...++.+|||||||+|..+..+++..|..+|+++|+|+.+++.|++++... ++ ++++++.+|+.+.. . .++|
T Consensus 116 ~~~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~f 195 (334)
T 1xj5_A 116 CSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSY 195 (334)
T ss_dssp TTSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCE
T ss_pred hhCCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCc
Confidence 3345678999999999999999998766789999999999999999987653 33 47999999987642 2 2689
Q ss_pred cEEEEcccc--ccccc--HHHHHHHHHhccccCeeEEEEe
Q 022810 132 DRIYSIEMF--EHMKN--YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 132 D~v~~~~~l--~~~~~--~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
|+|+++... +...+ ...+++.+.++|+|||++++..
T Consensus 196 DlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 196 DAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred cEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 999997642 11122 4789999999999999999864
No 211
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.49 E-value=1.3e-13 Score=123.33 Aligned_cols=108 Identities=19% Similarity=0.195 Sum_probs=89.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC--CeEEEEccccCCcc-----CCCccEE
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ--NVEIIVADISTFEM-----EASYDRI 134 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~--~i~~~~~d~~~~~~-----~~~~D~v 134 (291)
.++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.|+++++.++++ +++++++|+.+... ..+||+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 468899999999999999999762 348999999999999999999999985 89999999977421 2589999
Q ss_pred EEccccc-----cc----ccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 135 YSIEMFE-----HM----KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 135 ~~~~~l~-----~~----~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+++++.. .. .++..+++.+.++|+|||++++++...
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 9987663 22 345667888899999999999876543
No 212
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.49 E-value=8.2e-14 Score=123.63 Aligned_cols=107 Identities=16% Similarity=0.203 Sum_probs=89.5
Q ss_pred HHHHc--CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCcc
Q 022810 55 YCERS--RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYD 132 (291)
Q Consensus 55 ~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D 132 (291)
+++.+ ...++.+|||||||+|..+..+++++|+.+++++|+ +.+++.+++ .++++++.+|+.+ +.+ .||
T Consensus 183 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~-~~D 253 (358)
T 1zg3_A 183 VLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFK-SIP-SAD 253 (358)
T ss_dssp HHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------CSSEEEEECCTTT-CCC-CCS
T ss_pred HHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------CCCcEEEeCccCC-CCC-Cce
Confidence 44444 344678999999999999999999999999999999 787766543 2469999999987 444 599
Q ss_pred EEEEcccccccccHH--HHHHHHHhcccc---CeeEEEEeecc
Q 022810 133 RIYSIEMFEHMKNYQ--NLLKKISKWMKE---DTLLFVHHFCH 170 (291)
Q Consensus 133 ~v~~~~~l~~~~~~~--~~l~~~~~~L~p---gG~l~i~~~~~ 170 (291)
+|++..++|++++.. .++++++++|+| ||++++.++..
T Consensus 254 ~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 254 AVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred EEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 999999999998866 999999999999 99999977654
No 213
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.49 E-value=1.9e-14 Score=118.39 Aligned_cols=88 Identities=20% Similarity=0.229 Sum_probs=75.8
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEccc
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEM 139 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~~~ 139 (291)
..++.+|||||||+|.++..+ ..+++|+|+|+. ++.++++|+.+.+.+ ++||+|++..+
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l-----~~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~~ 124 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSI-----RNPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCLS 124 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHC-----CSCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEESC
T ss_pred cCCCCeEEEECCcCCHHHHHh-----hccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEehh
Confidence 356789999999999998876 368999999987 456889999887665 78999999999
Q ss_pred ccccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 140 FEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+++ .+...+++++.++|+|||.+++.++.
T Consensus 125 l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 125 LMG-TNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp CCS-SCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred ccc-cCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 964 88999999999999999999997654
No 214
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.49 E-value=1.9e-13 Score=121.91 Aligned_cols=114 Identities=18% Similarity=0.196 Sum_probs=90.6
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC-C
Q 022810 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME-A 129 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~-~ 129 (291)
...++... ..++.+|||+|||+|.+++.++...+..+|+|+|+|+.+++.|++++...++ ++++++++|+.+++.+ +
T Consensus 207 a~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~ 285 (373)
T 3tm4_A 207 ANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVD 285 (373)
T ss_dssp HHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCS
T ss_pred HHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccC
Confidence 33444444 6788999999999999999999885445999999999999999999999998 5899999999998766 7
Q ss_pred CccEEEEccccccc-------cc-HHHHHHHHHhccccCeeEEEEee
Q 022810 130 SYDRIYSIEMFEHM-------KN-YQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 130 ~~D~v~~~~~l~~~-------~~-~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
+||+|++++++... .+ +..+++.+.++| +|.+++.+.
T Consensus 286 ~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~ 330 (373)
T 3tm4_A 286 SVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT 330 (373)
T ss_dssp CEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES
T ss_pred CcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC
Confidence 89999999886432 12 367888888888 455444443
No 215
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.48 E-value=9.1e-14 Score=124.36 Aligned_cols=106 Identities=16% Similarity=0.191 Sum_probs=87.7
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc--CCCccEEEEccc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--EASYDRIYSIEM 139 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~--~~~~D~v~~~~~ 139 (291)
.++.+|||+|||+|.++..+++. +++|+++|+|+.+++.|+++++.++++ ..+.++|+.+... .+.||+|+++++
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~-~~~~~~D~~~~l~~~~~~fD~Ii~dpP 289 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLR-VDIRHGEALPTLRGLEGPFHHVLLDPP 289 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-CEEEESCHHHHHHTCCCCEEEEEECCC
T ss_pred cCCCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCC-CcEEEccHHHHHHHhcCCCCEEEECCC
Confidence 46899999999999999999987 667999999999999999999999884 4677999887532 345999999876
Q ss_pred ccc---------cccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 140 FEH---------MKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 140 l~~---------~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
... ..++..++..+.++|+|||.+++.+.+.
T Consensus 290 ~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 290 TLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp CCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 522 2456789999999999999998766544
No 216
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.48 E-value=1.4e-13 Score=125.17 Aligned_cols=113 Identities=12% Similarity=0.077 Sum_probs=93.6
Q ss_pred HHcCCCCCCEEEEEcCCcchHHHHHHHHCCC-CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc--CCCccE
Q 022810 57 ERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--EASYDR 133 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~-~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~--~~~~D~ 133 (291)
..+...++.+|||+|||+|..+..+++..++ .+|+++|+|+.+++.+++++...|+. +.++++|+.++.. +++||+
T Consensus 95 ~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~ 173 (464)
T 3m6w_A 95 VLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHR 173 (464)
T ss_dssp HHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEE
T ss_pred HhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCE
Confidence 3456778999999999999999999988654 79999999999999999999999997 9999999987652 378999
Q ss_pred EEEccccc------cccc----------------HHHHHHHHHhccccCeeEEEEeecc
Q 022810 134 IYSIEMFE------HMKN----------------YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 134 v~~~~~l~------~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
|+++.+.. ..++ ...+++.+.++|||||+|+.++.+.
T Consensus 174 Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 174 VLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp EEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred EEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 99865431 1111 2679999999999999999877654
No 217
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.48 E-value=1.2e-13 Score=118.66 Aligned_cols=111 Identities=20% Similarity=0.123 Sum_probs=88.5
Q ss_pred cCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhC----CCCeEEEEccccCCcc--CCCcc
Q 022810 59 SRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE----LQNVEIIVADISTFEM--EASYD 132 (291)
Q Consensus 59 ~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~----~~~i~~~~~d~~~~~~--~~~~D 132 (291)
+...++.+|||||||+|..+..+++..|..+|+++|+++.+++.+++++...+ .++++++.+|+.+... .++||
T Consensus 74 ~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD 153 (283)
T 2i7c_A 74 TVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYD 153 (283)
T ss_dssp TTSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEE
T ss_pred hcCCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCce
Confidence 34456789999999999999999987667899999999999999999876432 2479999999977432 37899
Q ss_pred EEEEcccccccc--cH--HHHHHHHHhccccCeeEEEEeec
Q 022810 133 RIYSIEMFEHMK--NY--QNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 133 ~v~~~~~l~~~~--~~--~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+|+++......+ .. ..+++.+.++|+|||++++...+
T Consensus 154 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 154 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp EEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 999976433222 22 68999999999999999987543
No 218
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.48 E-value=1e-13 Score=120.76 Aligned_cols=109 Identities=11% Similarity=0.014 Sum_probs=88.5
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH--hC---CCCeEEEEccccCCc-c-CCCccE
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV--LE---LQNVEIIVADISTFE-M-EASYDR 133 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~--~~---~~~i~~~~~d~~~~~-~-~~~~D~ 133 (291)
..++.+|||||||+|..+..+++..+..+|+++|+++.+++.|++++.. .+ .++++++.+|+.+.. . .++||+
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV 154 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccE
Confidence 3466899999999999999999876678999999999999999998764 22 247999999998742 2 378999
Q ss_pred EEEcccccc---cc--c--HHHHHHHHHhccccCeeEEEEeec
Q 022810 134 IYSIEMFEH---MK--N--YQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 134 v~~~~~l~~---~~--~--~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
|+++...+. .+ . ...+++.+.++|+|||++++...+
T Consensus 155 Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 155 VIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 999876644 11 1 378999999999999999987543
No 219
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.48 E-value=2.1e-13 Score=117.99 Aligned_cols=91 Identities=16% Similarity=0.272 Sum_probs=74.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCC
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEA 129 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~ 129 (291)
..++.+++.+...++.+|||||||+|.++..+++. +.+|+|+|+++.+++.+++++...+.++++++++|+.+.+. .
T Consensus 29 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~-~ 105 (299)
T 2h1r_A 29 GILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVF-P 105 (299)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCC-C
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCc-c
Confidence 45666777777888999999999999999999987 67999999999999999999887777789999999988754 4
Q ss_pred CccEEEEccccccc
Q 022810 130 SYDRIYSIEMFEHM 143 (291)
Q Consensus 130 ~~D~v~~~~~l~~~ 143 (291)
+||+|+++.+++..
T Consensus 106 ~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 106 KFDVCTANIPYKIS 119 (299)
T ss_dssp CCSEEEEECCGGGH
T ss_pred cCCEEEEcCCcccc
Confidence 89999998877544
No 220
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.48 E-value=2.7e-13 Score=121.89 Aligned_cols=107 Identities=11% Similarity=0.120 Sum_probs=91.4
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-C-CeEEEEccccCCcc-----CCCccEE
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-Q-NVEIIVADISTFEM-----EASYDRI 134 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~-~i~~~~~d~~~~~~-----~~~~D~v 134 (291)
.++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.|++++..+++ + +++++++|+.+... ..+||+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 467899999999999999999863 45999999999999999999999988 6 89999999987532 2589999
Q ss_pred EEcccccc---------cccHHHHHHHHHhccccCeeEEEEeec
Q 022810 135 YSIEMFEH---------MKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 135 ~~~~~l~~---------~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+++++... ..+...++..+.+.|+|||++++++..
T Consensus 298 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp EECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 99876522 256788999999999999999987654
No 221
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.47 E-value=2.5e-13 Score=124.51 Aligned_cols=113 Identities=14% Similarity=0.101 Sum_probs=93.3
Q ss_pred HcCCC--CCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc--CCCcc
Q 022810 58 RSRLE--DGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--EASYD 132 (291)
Q Consensus 58 ~~~~~--~~~~vLDiGcG~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~--~~~~D 132 (291)
.+... ++.+|||+|||+|..+..+++..+ ..+|+++|+|+.+++.++++++..+++++.++++|+..+.. +++||
T Consensus 110 ~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD 189 (479)
T 2frx_A 110 ALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFD 189 (479)
T ss_dssp HHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEE
T ss_pred HhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCC
Confidence 34555 899999999999999999999864 47999999999999999999999998889999999988653 37899
Q ss_pred EEEEcccc------ccccc----------------HHHHHHHHHhccccCeeEEEEeecc
Q 022810 133 RIYSIEMF------EHMKN----------------YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 133 ~v~~~~~l------~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+|+++.+. ...++ ...+++.+.++|||||++++++.+.
T Consensus 190 ~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 190 AILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp EEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 99996432 11111 3568999999999999999887654
No 222
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.47 E-value=1.3e-13 Score=125.16 Aligned_cols=114 Identities=15% Similarity=0.116 Sum_probs=94.1
Q ss_pred HHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--cCCCccE
Q 022810 57 ERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--MEASYDR 133 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~--~~~~~D~ 133 (291)
..+...++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+++++...|+.++.++++|+.++. .+++||+
T Consensus 99 ~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~ 178 (456)
T 3m4x_A 99 TAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDR 178 (456)
T ss_dssp HHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEE
T ss_pred HHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCE
Confidence 445678899999999999999999998754 4799999999999999999999999988999999998764 2378999
Q ss_pred EEEccccccc------c----------------cHHHHHHHHHhccccCeeEEEEeecc
Q 022810 134 IYSIEMFEHM------K----------------NYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 134 v~~~~~l~~~------~----------------~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
|+++.+.... + ....+++.+.++|||||+|+.++.+.
T Consensus 179 Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 179 IVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp EEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred EEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 9997652111 1 12378999999999999999877654
No 223
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.47 E-value=1e-13 Score=115.09 Aligned_cols=102 Identities=13% Similarity=0.141 Sum_probs=90.0
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccccc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFE 141 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~l~ 141 (291)
.+..+|||||||+|.++..++...|..+|+++|+++.+++.+++++..+|+ +.++...|.....++++||+|+++-+++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~-~~~~~v~D~~~~~p~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV-PHRTNVADLLEDRLDEPADVTLLLKTLP 209 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC-CEEEEECCTTTSCCCSCCSEEEETTCHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEeeecccCCCCCcchHHHHHHHH
Confidence 457799999999999999999888899999999999999999999999888 5899999998877778999999999999
Q ss_pred ccccHH--HHHHHHHhccccCeeEEE
Q 022810 142 HMKNYQ--NLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 142 ~~~~~~--~~l~~~~~~L~pgG~l~i 165 (291)
++++.. ..+ ++...|+|+|+++-
T Consensus 210 ~Le~q~kg~g~-~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 210 CLETQQRGSGW-EVIDIVNSPNIVVT 234 (281)
T ss_dssp HHHHHSTTHHH-HHHHHSSCSEEEEE
T ss_pred HhhhhhhHHHH-HHHHHhCCCCEEEe
Confidence 996542 345 89999999998654
No 224
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.47 E-value=8.9e-14 Score=120.46 Aligned_cols=110 Identities=15% Similarity=0.098 Sum_probs=86.2
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH--hCC--CCeEEEEccccCCc-c-CCCccE
Q 022810 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV--LEL--QNVEIIVADISTFE-M-EASYDR 133 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~--~~~--~~i~~~~~d~~~~~-~-~~~~D~ 133 (291)
...++.+|||||||+|..+..+++..+..+|+++|+++.+++.|++++.. .++ ++++++.+|+.+.. . .++||+
T Consensus 92 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~ 171 (304)
T 2o07_A 92 SHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDV 171 (304)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEE
T ss_pred hCCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceE
Confidence 34567899999999999999999876668999999999999999998765 222 47999999987642 2 378999
Q ss_pred EEEcccccccc----cHHHHHHHHHhccccCeeEEEEeec
Q 022810 134 IYSIEMFEHMK----NYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 134 v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
|+++......+ ....+++.+.++|+|||++++...+
T Consensus 172 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 172 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 99976543221 2356899999999999999987644
No 225
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.47 E-value=9.7e-14 Score=118.63 Aligned_cols=108 Identities=22% Similarity=0.126 Sum_probs=86.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh--CC--CCeEEEEccccCCc-c-CCCccEEE
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--EL--QNVEIIVADISTFE-M-EASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~--~~--~~i~~~~~d~~~~~-~-~~~~D~v~ 135 (291)
.++.+|||||||+|..+..+++..+..+|++||+++.+++.|++++... +. ++++++.+|+.+.. . .++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 4578999999999999999997755689999999999999999987542 22 47999999987642 2 37899999
Q ss_pred Ecccccccc----cHHHHHHHHHhccccCeeEEEEeec
Q 022810 136 SIEMFEHMK----NYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 136 ~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
++......+ ....+++.+.++|+|||++++...+
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 976543221 1367999999999999999987543
No 226
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.46 E-value=1.7e-13 Score=123.14 Aligned_cols=108 Identities=18% Similarity=0.134 Sum_probs=91.3
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCcc-----CCCccEEE
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM-----EASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~-----~~~~D~v~ 135 (291)
.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++..++++ +++++++|+.+... ..+||+|+
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 47889999999999999999986 2459999999999999999999999886 89999999987532 36899999
Q ss_pred Eccccccc---------ccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 136 SIEMFEHM---------KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 136 ~~~~l~~~---------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
++++.... .+...++..+.+.|+|||.+++.+...
T Consensus 295 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 295 LDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp ECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 98765322 456789999999999999988877654
No 227
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.46 E-value=1.1e-13 Score=119.44 Aligned_cols=108 Identities=15% Similarity=0.026 Sum_probs=84.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH--hC--CCCeEEEEccccCCc-c-CCCccEEE
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV--LE--LQNVEIIVADISTFE-M-EASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~--~~--~~~i~~~~~d~~~~~-~-~~~~D~v~ 135 (291)
..+.+|||||||+|..+..+++..+..+|+++|+++.+++.+++++.. .+ .++++++.+|+.+.. . .++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 456899999999999999999876678999999999999999998754 22 247999999987642 2 37899999
Q ss_pred Ecccccccc-----cHHHHHHHHHhccccCeeEEEEeec
Q 022810 136 SIEMFEHMK-----NYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 136 ~~~~l~~~~-----~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
++..-.+.. ....+++.+.++|+|||++++...+
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 865432121 2368999999999999999997543
No 228
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.46 E-value=4.2e-13 Score=121.82 Aligned_cols=115 Identities=12% Similarity=0.111 Sum_probs=94.9
Q ss_pred HHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--cC-CCc
Q 022810 55 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--ME-ASY 131 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~--~~-~~~ 131 (291)
+...+...++.+|||+|||+|..+..+++..++.+|+++|+++.+++.+++++...++ ++.++++|+.+.. .+ ++|
T Consensus 238 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~-~~~~~~~D~~~~~~~~~~~~f 316 (429)
T 1sqg_A 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQWCGEQQF 316 (429)
T ss_dssp HHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC-CCEEEECCTTCTHHHHTTCCE
T ss_pred HHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC-CeEEEeCchhhchhhcccCCC
Confidence 3444567889999999999999999999998668999999999999999999998888 6899999998875 33 689
Q ss_pred cEEEEcccc------ccccc----------------HHHHHHHHHhccccCeeEEEEeecc
Q 022810 132 DRIYSIEMF------EHMKN----------------YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 132 D~v~~~~~l------~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
|+|+++.+. .+.++ ...+++.+.+.|||||++++++.+.
T Consensus 317 D~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp EEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 999986543 22222 1578999999999999999987644
No 229
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.45 E-value=2.2e-12 Score=105.29 Aligned_cols=101 Identities=18% Similarity=0.185 Sum_probs=83.7
Q ss_pred cCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcc
Q 022810 59 SRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIE 138 (291)
Q Consensus 59 ~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~ 138 (291)
....++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.+++++...++ +++++++|+.+++ .+||+|+++.
T Consensus 45 ~~~~~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~--~~~D~v~~~~ 120 (207)
T 1wy7_A 45 LGDIEGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN--SRVDIVIMNP 120 (207)
T ss_dssp TTSSTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC--CCCSEEEECC
T ss_pred cCCCCcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC--CCCCEEEEcC
Confidence 345578899999999999999999873 35899999999999999999988877 8999999998864 5899999999
Q ss_pred cccccc--cHHHHHHHHHhccccCeeEEE
Q 022810 139 MFEHMK--NYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 139 ~l~~~~--~~~~~l~~~~~~L~pgG~l~i 165 (291)
+++... ....+++.+.+.+ |+.+++
T Consensus 121 p~~~~~~~~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 121 PFGSQRKHADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp CCSSSSTTTTHHHHHHHHHHC--SEEEEE
T ss_pred CCccccCCchHHHHHHHHHhc--CcEEEE
Confidence 987763 3457888888888 554433
No 230
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.45 E-value=1.1e-13 Score=120.75 Aligned_cols=108 Identities=20% Similarity=0.155 Sum_probs=86.3
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH--hCC--CCeEEEEccccCCc--cCCCccEEE
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV--LEL--QNVEIIVADISTFE--MEASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~--~~~--~~i~~~~~d~~~~~--~~~~~D~v~ 135 (291)
.++.+|||||||+|..+..+++..|..+|+++|+|+.+++.|++++.. .+. ++++++++|+.+.. .+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 456899999999999999999876678999999999999999998765 222 47999999987642 237899999
Q ss_pred Ecccccc--cccH--HHHHHHHHhccccCeeEEEEeec
Q 022810 136 SIEMFEH--MKNY--QNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 136 ~~~~l~~--~~~~--~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
++..-.. .... ..+++.+.+.|+|||++++...+
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9763211 1111 68999999999999999997543
No 231
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.45 E-value=2e-13 Score=117.11 Aligned_cols=107 Identities=9% Similarity=0.039 Sum_probs=85.2
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh-----------CCCCeEEEEccccCCcc-C
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL-----------ELQNVEIIVADISTFEM-E 128 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~-----------~~~~i~~~~~d~~~~~~-~ 128 (291)
..++.+|||||||+|..+..+++. +..+|+++|+++.+++.|++++ .. ..++++++.+|+.+... .
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~ 150 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNN 150 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHC
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhccc
Confidence 345789999999999999999987 6789999999999999999987 32 22479999999876422 4
Q ss_pred CCccEEEEcccccccc--c--HHHHHHHHHhccccCeeEEEEeec
Q 022810 129 ASYDRIYSIEMFEHMK--N--YQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~--~--~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
++||+|+++......+ . ...+++.+.++|+|||++++...+
T Consensus 151 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 151 RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 7899999976542211 1 267899999999999999987543
No 232
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.45 E-value=6.9e-13 Score=107.76 Aligned_cols=90 Identities=21% Similarity=0.235 Sum_probs=72.9
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccc
Q 022810 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEM 139 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~ 139 (291)
...++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.+++++. +++++++|+.+++ ++||+|+++.+
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~--~~~D~v~~~~p 119 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS--GKYDTWIMNPP 119 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC--CCEEEEEECCC
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC--CCeeEEEECCC
Confidence 4557889999999999999999976 34579999999999999988764 6899999998864 78999999999
Q ss_pred cccccc--HHHHHHHHHhcc
Q 022810 140 FEHMKN--YQNLLKKISKWM 157 (291)
Q Consensus 140 l~~~~~--~~~~l~~~~~~L 157 (291)
+++..+ ...+++++.+.+
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 120 FGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp C-------CHHHHHHHHHHE
T ss_pred chhccCchhHHHHHHHHHhc
Confidence 988853 346888888887
No 233
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.44 E-value=1.3e-12 Score=118.69 Aligned_cols=116 Identities=18% Similarity=0.275 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC
Q 022810 46 DAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF 125 (291)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~ 125 (291)
.....+++.+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++..+++++++++++|+.+.
T Consensus 269 ~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~ 346 (433)
T 1uwv_A 269 GVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEED 346 (433)
T ss_dssp HHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSC
T ss_pred HHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHH
Confidence 344566777777777778889999999999999999987 789999999999999999999999888899999999873
Q ss_pred c----cC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 126 E----ME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 126 ~----~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
. .. ++||+|+++++..... .+++.+.+ ++|+++++++.
T Consensus 347 l~~~~~~~~~fD~Vv~dPPr~g~~---~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 347 VTKQPWAKNGFDKVLLDPARAGAA---GVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp CSSSGGGTTCCSEEEECCCTTCCH---HHHHHHHH-HCCSEEEEEES
T ss_pred hhhhhhhcCCCCEEEECCCCccHH---HHHHHHHh-cCCCeEEEEEC
Confidence 2 22 6899999998875443 45555554 78999888854
No 234
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.44 E-value=9.3e-14 Score=120.75 Aligned_cols=106 Identities=17% Similarity=0.119 Sum_probs=82.7
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh--CC--CCeEEEEccccCCc-c-CCCccEEE
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--EL--QNVEIIVADISTFE-M-EASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~--~~--~~i~~~~~d~~~~~-~-~~~~D~v~ 135 (291)
.++.+|||||||+|..+..+++..|..+|+++|+++.+++.|++++... ++ ++++++.+|+.+.. . .++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 4568999999999999999998766789999999999999999987643 22 47999999987742 2 37899999
Q ss_pred Eccccccccc--H--HHHHHHHHhccccCeeEEEEe
Q 022810 136 SIEMFEHMKN--Y--QNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 136 ~~~~l~~~~~--~--~~~l~~~~~~L~pgG~l~i~~ 167 (291)
++...+..+. . ..+++.+.++|+|||++++..
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 9764321111 1 689999999999999999875
No 235
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.44 E-value=7.3e-13 Score=107.09 Aligned_cols=99 Identities=19% Similarity=0.172 Sum_probs=77.3
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCC---------CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEE-EccccCCc----
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSN---------CKITGICNSKTQKEFIEEQCRVLELQNVEII-VADISTFE---- 126 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~---------~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~-~~d~~~~~---- 126 (291)
+.++.+|||+|||+|..+..+++..+. .+|+++|+|+.. ...+++++ .+|+....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHH
Confidence 467899999999999999999998744 799999999841 23468889 89987643
Q ss_pred ----cC-CCccEEEEcccccc----cccH-------HHHHHHHHhccccCeeEEEEeecc
Q 022810 127 ----ME-ASYDRIYSIEMFEH----MKNY-------QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 127 ----~~-~~~D~v~~~~~l~~----~~~~-------~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
.+ ++||+|+++.+++. ..+. ..+++.+.++|+|||.+++..+..
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 12 58999999765443 2232 478999999999999999876543
No 236
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.44 E-value=9.2e-13 Score=117.68 Aligned_cols=122 Identities=16% Similarity=0.220 Sum_probs=98.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCC--------------------------------------CEE
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN--------------------------------------CKI 90 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~--------------------------------------~~v 90 (291)
+.+...++...+..++.+|||++||+|.+++.++....+ .+|
T Consensus 181 e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 260 (385)
T 3ldu_A 181 ETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKI 260 (385)
T ss_dssp HHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCE
T ss_pred HHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceE
Confidence 345556677777788999999999999999998876311 579
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCCccEEEEccccccc----ccHHHHHHHHHhcccc--CeeE
Q 022810 91 TGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEMFEHM----KNYQNLLKKISKWMKE--DTLL 163 (291)
Q Consensus 91 ~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~L~p--gG~l 163 (291)
+|+|+++.+++.|++++...++. ++++.++|+.++..+.+||+|++++++..- .+...+++.+.+.|++ |+.+
T Consensus 261 ~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~ 340 (385)
T 3ldu_A 261 YGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSY 340 (385)
T ss_dssp EEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEE
Confidence 99999999999999999999984 799999999998766889999999997432 3445677777777765 8888
Q ss_pred EEEeecc
Q 022810 164 FVHHFCH 170 (291)
Q Consensus 164 ~i~~~~~ 170 (291)
++.+...
T Consensus 341 ~iit~~~ 347 (385)
T 3ldu_A 341 YLITSYE 347 (385)
T ss_dssp EEEESCT
T ss_pred EEEECCH
Confidence 8876543
No 237
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.44 E-value=1.8e-12 Score=117.16 Aligned_cols=109 Identities=17% Similarity=0.342 Sum_probs=88.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~ 128 (291)
..++..+++ ..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++..++++ ++++.+|+.+...
T Consensus 279 e~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~- 351 (425)
T 2jjq_A 279 VNLVRKVSE---LVEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSV- 351 (425)
T ss_dssp HHHHHHHHH---HCCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCC-
T ss_pred HHHHHHhhc---cCCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCc-
Confidence 344455544 456789999999999999999986 679999999999999999999999886 9999999998753
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
.+||+|+++++..... ..+++.+. .|+|+|++++++
T Consensus 352 ~~fD~Vv~dPPr~g~~--~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 352 KGFDTVIVDPPRAGLH--PRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp TTCSEEEECCCTTCSC--HHHHHHHH-HHCCSEEEEEES
T ss_pred cCCCEEEEcCCccchH--HHHHHHHH-hcCCCcEEEEEC
Confidence 3899999988754332 34555554 489999998864
No 238
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.44 E-value=1.2e-12 Score=117.19 Aligned_cols=122 Identities=14% Similarity=0.148 Sum_probs=97.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCC--------------------------------------CEE
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN--------------------------------------CKI 90 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~--------------------------------------~~v 90 (291)
+.+...++...+..++..|||++||+|.+++.++....+ .+|
T Consensus 187 e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 187 ETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 445566777778888999999999999999998876322 469
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCCccEEEEccccccc----ccHHHHHHHHHhcccc--CeeE
Q 022810 91 TGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEMFEHM----KNYQNLLKKISKWMKE--DTLL 163 (291)
Q Consensus 91 ~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~L~p--gG~l 163 (291)
+|+|+|+.+++.|++++...++. +++++++|+.+.+.+.+||+|++++++..- .+...+++.+.+.|++ ||.+
T Consensus 267 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~ 346 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSV 346 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEE
Confidence 99999999999999999999985 599999999998766889999999987432 2344566666666655 8888
Q ss_pred EEEeecc
Q 022810 164 FVHHFCH 170 (291)
Q Consensus 164 ~i~~~~~ 170 (291)
++.+...
T Consensus 347 ~iit~~~ 353 (393)
T 3k0b_A 347 YVLTSYE 353 (393)
T ss_dssp EEEECCT
T ss_pred EEEECCH
Confidence 8876643
No 239
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.43 E-value=2.9e-13 Score=129.62 Aligned_cols=106 Identities=17% Similarity=0.170 Sum_probs=90.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC--CeEEEEccccCCc-c-CCCccEEEEcc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ--NVEIIVADISTFE-M-EASYDRIYSIE 138 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~--~i~~~~~d~~~~~-~-~~~~D~v~~~~ 138 (291)
++.+|||+|||+|.++..++... ..+|+++|+|+.+++.|++++..++++ +++++++|+.+.. . .++||+|++++
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 68899999999999999998752 347999999999999999999999985 7999999998742 2 27899999987
Q ss_pred cc-----------cccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 139 MF-----------EHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 139 ~l-----------~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+. ....++..++..+.++|+|||++++++..
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 53 23356788999999999999999987654
No 240
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.43 E-value=4.8e-13 Score=117.60 Aligned_cols=101 Identities=15% Similarity=0.186 Sum_probs=87.8
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCCccEEEEcccc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDRIYSIEMF 140 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~~~~~D~v~~~~~l 140 (291)
.++.+|||+|||+|.++.. ++ .+.+|+++|+|+.+++.++++++.+++ ++++++++|+.+.. ++||+|+++.+.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--VKGNRVIMNLPK 268 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--CCEEEEEECCTT
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--CCCcEEEECCcH
Confidence 4788999999999999999 76 378999999999999999999999988 57999999998876 789999998654
Q ss_pred cccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022810 141 EHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
.. ..+++.+.++|+|||.+++.+..+.
T Consensus 269 ~~----~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 269 FA----HKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp TG----GGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred hH----HHHHHHHHHHcCCCCEEEEEEeecC
Confidence 32 3788899999999999988776553
No 241
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.43 E-value=1.7e-12 Score=115.67 Aligned_cols=122 Identities=16% Similarity=0.132 Sum_probs=98.7
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCC--------------------------------------CEE
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN--------------------------------------CKI 90 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~--------------------------------------~~v 90 (291)
+.+...++...+..++..|||.+||+|.+++.++....+ .++
T Consensus 180 e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 180 ENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 345566677778888999999999999999998865322 469
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCCccEEEEccccccc----ccHHHHHHHHHhcccc--CeeE
Q 022810 91 TGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEMFEHM----KNYQNLLKKISKWMKE--DTLL 163 (291)
Q Consensus 91 ~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~L~p--gG~l 163 (291)
+|+|+++.+++.|++|+...++. +++++++|+.+++.+.+||+|++++++..- .+...+++.+.+.||+ ||.+
T Consensus 260 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~ 339 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQ 339 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEE
Confidence 99999999999999999999985 599999999998766789999999987432 3456677777777765 9988
Q ss_pred EEEeecc
Q 022810 164 FVHHFCH 170 (291)
Q Consensus 164 ~i~~~~~ 170 (291)
++.+...
T Consensus 340 ~iit~~~ 346 (384)
T 3ldg_A 340 FILTNDT 346 (384)
T ss_dssp EEEESCT
T ss_pred EEEECCH
Confidence 8877644
No 242
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.42 E-value=5.8e-13 Score=121.50 Aligned_cols=120 Identities=17% Similarity=0.133 Sum_probs=97.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-------------CCCEEEEEcCCHHHHHHHHHHHHHhCCC--C
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-------------SNCKITGICNSKTQKEFIEEQCRVLELQ--N 114 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-------------p~~~v~~vD~s~~~~~~a~~~~~~~~~~--~ 114 (291)
...+.+++.+...++.+|||+|||+|.++..+++.. +..+++|+|+++.+++.|+.++...++. +
T Consensus 158 ~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~ 237 (445)
T 2okc_A 158 PLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDR 237 (445)
T ss_dssp HHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSC
T ss_pred HHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCC
Confidence 344556666666778899999999999999888652 2468999999999999999999888874 6
Q ss_pred eEEEEccccCCccCCCccEEEEccccccccc-----------------HHHHHHHHHhccccCeeEEEEeec
Q 022810 115 VEIIVADISTFEMEASYDRIYSIEMFEHMKN-----------------YQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 115 i~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~-----------------~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
+.+.++|....+...+||+|++++++..... ...+++++.+.|+|||++.+..+.
T Consensus 238 ~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 238 SPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp CSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 7889999887655468999999998875421 147899999999999999888764
No 243
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.42 E-value=1.1e-12 Score=107.96 Aligned_cols=100 Identities=15% Similarity=0.198 Sum_probs=85.0
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccccc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFE 141 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~l~ 141 (291)
.++.+|||||||.|.++..+. ++.+|+++|+++.+++.+++++...+. +..+..+|....+++++||+|++.-+++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~-~~~~~v~D~~~~~~~~~~DvvLllk~lh 179 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDW-DFTFALQDVLCAPPAEAGDLALIFKLLP 179 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTC-EEEEEECCTTTSCCCCBCSEEEEESCHH
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCC-CceEEEeecccCCCCCCcchHHHHHHHH
Confidence 567899999999999999887 589999999999999999999888775 7899999999887778999999999998
Q ss_pred ccccHH-HHHHHHHhccccCeeEEE
Q 022810 142 HMKNYQ-NLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 142 ~~~~~~-~~l~~~~~~L~pgG~l~i 165 (291)
++++.. ....++...|+++|+++-
T Consensus 180 ~LE~q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 180 LLEREQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp HHHHHSTTHHHHHHHHCBCSEEEEE
T ss_pred HhhhhchhhHHHHHHHhcCCCEEEE
Confidence 885432 233378889999987543
No 244
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.41 E-value=1.6e-12 Score=105.05 Aligned_cols=106 Identities=20% Similarity=0.300 Sum_probs=80.6
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---
Q 022810 52 LELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--- 127 (291)
Q Consensus 52 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~--- 127 (291)
+..+.++.. +.++.+|||+|||+|..+..++++ +.+|+|+|+++.. ..++++++++|+.+...
T Consensus 13 L~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~ 79 (191)
T 3dou_A 13 LEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDD 79 (191)
T ss_dssp HHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHH
T ss_pred HHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHH
Confidence 444555544 467899999999999999999987 7899999999851 23579999999987541
Q ss_pred -----C----CCccEEEEccccccc-----------ccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 128 -----E----ASYDRIYSIEMFEHM-----------KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 128 -----~----~~~D~v~~~~~l~~~-----------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
. ++||+|+++...... .....+++.+.++|||||.|++..+..
T Consensus 80 ~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 80 IDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp HHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 1 389999997643211 123567888999999999999877643
No 245
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.41 E-value=5.3e-13 Score=113.12 Aligned_cols=100 Identities=12% Similarity=0.007 Sum_probs=82.7
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH----hCCCCeEEEEccccCCccCCCccEEEE
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV----LELQNVEIIVADISTFEMEASYDRIYS 136 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~----~~~~~i~~~~~d~~~~~~~~~~D~v~~ 136 (291)
...+.+|||||||+|..+..+++. + .+|+++|+++.+++.|++++.. ...++++++.+|+.+.. ++||+|++
T Consensus 70 ~~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--~~fD~Ii~ 145 (262)
T 2cmg_A 70 KKELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--KKYDLIFC 145 (262)
T ss_dssp SSCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--CCEEEEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--hhCCEEEE
Confidence 445689999999999999999987 6 8999999999999999876532 12247999999998865 78999999
Q ss_pred cccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 137 IEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 137 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
.. .++..+++.+.+.|+|||++++....
T Consensus 146 d~-----~dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 146 LQ-----EPDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp SS-----CCCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CC-----CChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 73 34456999999999999999986543
No 246
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.40 E-value=1.3e-13 Score=117.57 Aligned_cols=113 Identities=25% Similarity=0.289 Sum_probs=81.1
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHH-HhCC-CCeEEE--EccccCCc
Q 022810 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCR-VLEL-QNVEII--VADISTFE 126 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~-~~~~-~~i~~~--~~d~~~~~ 126 (291)
++..+.+...+.++.+|||||||+|.++..++++ .+|+|||+++ ++..++++.. .... .++.++ ++|+.+++
T Consensus 70 KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 145 (276)
T 2wa2_A 70 KLAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME 145 (276)
T ss_dssp HHHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC
T ss_pred HHHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC
Confidence 3455555545568899999999999999999876 5899999998 5322221100 0001 168899 99998865
Q ss_pred cCCCccEEEEccccccccc----HH---HHHHHHHhccccCe--eEEEEeec
Q 022810 127 MEASYDRIYSIEMFEHMKN----YQ---NLLKKISKWMKEDT--LLFVHHFC 169 (291)
Q Consensus 127 ~~~~~D~v~~~~~l~~~~~----~~---~~l~~~~~~L~pgG--~l~i~~~~ 169 (291)
+++||+|+|+.+ ++..+ .. .+++.+.++||||| .+++..+.
T Consensus 146 -~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 146 -PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred -CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 578999999876 33322 11 37889999999999 99887665
No 247
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.39 E-value=4.3e-13 Score=114.63 Aligned_cols=107 Identities=13% Similarity=0.062 Sum_probs=79.6
Q ss_pred HHHHHHHHcCCC-CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEE-EEccccCCcc-
Q 022810 51 MLELYCERSRLE-DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEI-IVADISTFEM- 127 (291)
Q Consensus 51 ~~~~~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~-~~~d~~~~~~- 127 (291)
++..+++.+.+. ++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.+.++ . .++.. ...|+..+..
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~----~-~rv~~~~~~ni~~l~~~ 145 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQ----D-DRVRSMEQYNFRYAEPV 145 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHT----C-TTEEEECSCCGGGCCGG
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh----C-cccceecccCceecchh
Confidence 455666666654 5779999999999999999887 246999999999999875432 1 13332 2345544332
Q ss_pred --C-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 128 --E-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 --~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+ .+||+|++..+++++ ..++.++.++|+|||.+++.
T Consensus 146 ~l~~~~fD~v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 146 DFTEGLPSFASIDVSFISL---NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp GCTTCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEE
T ss_pred hCCCCCCCEEEEEeeHhhH---HHHHHHHHHHcCcCCEEEEE
Confidence 2 359999998888755 67899999999999998885
No 248
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.39 E-value=1.8e-13 Score=108.99 Aligned_cols=91 Identities=15% Similarity=0.107 Sum_probs=78.5
Q ss_pred HcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---C-CCccE
Q 022810 58 RSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---E-ASYDR 133 (291)
Q Consensus 58 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~---~-~~~D~ 133 (291)
.+++.++.+|||+|||. +++|+|+.|++.|+++... +++++++|+.+++. + ++||+
T Consensus 7 ~~g~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 7 DFGISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGN----EGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp TTTCCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTT----TSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred ccCCCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhccc----CcEEEEechhcCccccCCCCCEeE
Confidence 35678999999999985 2399999999999877532 48999999998776 4 78999
Q ss_pred EEEccccccc-ccHHHHHHHHHhccccCeeEEEEee
Q 022810 134 IYSIEMFEHM-KNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 134 v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
|++..+++++ ++...++++++++|||||++++..+
T Consensus 67 V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 67 ILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp EEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 9999999999 8999999999999999999999544
No 249
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.38 E-value=2e-13 Score=115.92 Aligned_cols=108 Identities=24% Similarity=0.323 Sum_probs=80.3
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC------CeEEE--Ecccc
Q 022810 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ------NVEII--VADIS 123 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~------~i~~~--~~d~~ 123 (291)
+..+.+...+.++.+|||||||+|.++..+++. .+|+|||+++ ++..+++ .... ++.++ ++|+.
T Consensus 63 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~----~~~~~~~~~~~v~~~~~~~D~~ 134 (265)
T 2oxt_A 63 LAWMEERGYVELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHE----VPRITESYGWNIVKFKSRVDIH 134 (265)
T ss_dssp HHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCC----CCCCCCBTTGGGEEEECSCCTT
T ss_pred HHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhh----hhhhhhccCCCeEEEecccCHh
Confidence 445555555678899999999999999999876 6899999998 4322211 1111 68889 89998
Q ss_pred CCccCCCccEEEEcccccccccH----H---HHHHHHHhccccCe--eEEEEeec
Q 022810 124 TFEMEASYDRIYSIEMFEHMKNY----Q---NLLKKISKWMKEDT--LLFVHHFC 169 (291)
Q Consensus 124 ~~~~~~~~D~v~~~~~l~~~~~~----~---~~l~~~~~~L~pgG--~l~i~~~~ 169 (291)
+++ +++||+|+|+.+ ++..+. . .+++.+.++|+||| .+++..+.
T Consensus 135 ~l~-~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 135 TLP-VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp TSC-CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred HCC-CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 875 578999999876 433221 1 37889999999999 99887765
No 250
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.38 E-value=1.3e-12 Score=118.28 Aligned_cols=112 Identities=16% Similarity=0.244 Sum_probs=89.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~ 128 (291)
...+.+++.+...++.+|||+|||+|.++..++++. +..+++|+|+++.+++.| .++.++++|+.+....
T Consensus 26 ~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~~~~~~ 96 (421)
T 2ih2_A 26 EVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILADFLLWEPG 96 (421)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESCGGGCCCS
T ss_pred HHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCChhhcCcc
Confidence 445566666665567799999999999999999875 568999999999988766 3789999999887655
Q ss_pred CCccEEEEccccccccc-----------------------------HHHHHHHHHhccccCeeEEEEeecc
Q 022810 129 ASYDRIYSIEMFEHMKN-----------------------------YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~-----------------------------~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
++||+|++++++..... ...+++.+.++|+|||.+++..+..
T Consensus 97 ~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 97 EAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT 167 (421)
T ss_dssp SCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred CCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH
Confidence 78999999987643311 1256889999999999999988764
No 251
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.36 E-value=1.2e-11 Score=106.24 Aligned_cols=90 Identities=20% Similarity=0.318 Sum_probs=78.4
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~ 128 (291)
...++.+++.+...++.+|||||||+|.++..+++. +.+|+++|+++.+++.+++++.. .++++++++|+.+.+.+
T Consensus 36 ~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~--~~~v~vi~gD~l~~~~~ 111 (295)
T 3gru_A 36 KNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKEL--YNNIEIIWGDALKVDLN 111 (295)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHH--CSSEEEEESCTTTSCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhcc--CCCeEEEECchhhCCcc
Confidence 356777888888889999999999999999999998 78999999999999999998873 34899999999987766
Q ss_pred -CCccEEEEcccccc
Q 022810 129 -ASYDRIYSIEMFEH 142 (291)
Q Consensus 129 -~~~D~v~~~~~l~~ 142 (291)
.+||.|+++.+++.
T Consensus 112 ~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 112 KLDFNKVVANLPYQI 126 (295)
T ss_dssp GSCCSEEEEECCGGG
T ss_pred cCCccEEEEeCcccc
Confidence 67999999977643
No 252
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.36 E-value=1e-13 Score=115.49 Aligned_cols=108 Identities=15% Similarity=0.107 Sum_probs=73.3
Q ss_pred HHHHHHHHcCCC-CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEE-EccccCCc--
Q 022810 51 MLELYCERSRLE-DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEII-VADISTFE-- 126 (291)
Q Consensus 51 ~~~~~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~-~~d~~~~~-- 126 (291)
++..+++.+... ++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.++++.. ++... ..++....
T Consensus 24 kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~-----~~~~~~~~~~~~~~~~ 97 (232)
T 3opn_A 24 KLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDE-----RVVVMEQFNFRNAVLA 97 (232)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCT-----TEEEECSCCGGGCCGG
T ss_pred HHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCc-----cccccccceEEEeCHh
Confidence 345556666554 46799999999999999999872 3599999999999998765432 22111 11221111
Q ss_pred -cC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 127 -ME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 127 -~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
.+ ..+|.+.+..++..+ ..+++++.++|||||.+++..
T Consensus 98 ~~~~~~~d~~~~D~v~~~l---~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 98 DFEQGRPSFTSIDVSFISL---DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp GCCSCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE
T ss_pred HcCcCCCCEEEEEEEhhhH---HHHHHHHHHhccCCCEEEEEE
Confidence 11 125666665555444 679999999999999998843
No 253
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.35 E-value=2.6e-12 Score=114.36 Aligned_cols=116 Identities=16% Similarity=0.149 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC
Q 022810 46 DAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF 125 (291)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~ 125 (291)
.....++..+++.+... +.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++++.+++++++++.+|+.+.
T Consensus 197 ~~~~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~ 273 (369)
T 3bt7_A 197 AMNIQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEF 273 (369)
T ss_dssp HHHHHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHH
T ss_pred HHHHHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHH
Confidence 33456667777776654 578999999999999999875 679999999999999999999999988899999998775
Q ss_pred cc--C---------------CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 126 EM--E---------------ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 126 ~~--~---------------~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
.. . .+||+|+++++...+ ...+.+.|+++|.+++.+.++
T Consensus 274 ~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~------~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 274 TQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSGL------DSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp HHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTCC------CHHHHHHHTTSSEEEEEESCH
T ss_pred HHHHhhccccccccccccccCCCCEEEECcCcccc------HHHHHHHHhCCCEEEEEECCH
Confidence 31 1 279999998765422 344555566888877766544
No 254
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.33 E-value=5.4e-13 Score=115.50 Aligned_cols=112 Identities=17% Similarity=0.255 Sum_probs=79.0
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcC----CHHHHHHHHHHHHHhCCCCeEEEEc-cccCCcc
Q 022810 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICN----SKTQKEFIEEQCRVLELQNVEIIVA-DISTFEM 127 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~----s~~~~~~a~~~~~~~~~~~i~~~~~-d~~~~~~ 127 (291)
..+.++..+.++.+|||||||+|.++..++++ .+|+|+|+ ++.+++.+. ....+.+++.++++ |+..++
T Consensus 72 ~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~D~~~l~- 145 (305)
T 2p41_A 72 RWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIP--MSTYGWNLVRLQSGVDVFFIP- 145 (305)
T ss_dssp HHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCC--CCSTTGGGEEEECSCCTTTSC-
T ss_pred HHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHH--hhhcCCCCeEEEeccccccCC-
Confidence 33444434567899999999999999999976 48999999 554432111 11112246899999 888764
Q ss_pred CCCccEEEEccccc---ccccHH---HHHHHHHhccccCeeEEEEeecc
Q 022810 128 EASYDRIYSIEMFE---HMKNYQ---NLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 128 ~~~~D~v~~~~~l~---~~~~~~---~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
.++||+|+|+.++. +..+.. .++..+.++|||||.+++..+..
T Consensus 146 ~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 146 PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 36899999987653 222222 47888999999999999876654
No 255
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.33 E-value=6.8e-12 Score=111.64 Aligned_cols=101 Identities=14% Similarity=0.015 Sum_probs=86.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh---------------CCCCeEEEEccccCCcc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL---------------ELQNVEIIVADISTFEM 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~---------------~~~~i~~~~~d~~~~~~ 127 (291)
++.+|||+|||+|..++.++++.++.+|+++|+++.+++.+++|++.+ ++++++++++|+.....
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 578999999999999999999876779999999999999999999998 77569999999987542
Q ss_pred --CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 128 --EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 128 --~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
.++||+|++++.. ....+++.+.+.|+|||.++++.
T Consensus 127 ~~~~~fD~I~lDP~~----~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDPFG----SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECCSS----CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCCCC----CHHHHHHHHHHhcCCCCEEEEEe
Confidence 2579999976532 23578899999999999888865
No 256
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.32 E-value=1.2e-11 Score=105.86 Aligned_cols=97 Identities=14% Similarity=0.095 Sum_probs=74.6
Q ss_pred cCCCCCCEEEEEcCC------cchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEE-EEccccCCccCCC
Q 022810 59 SRLEDGHTVLDVGCG------WGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEI-IVADISTFEMEAS 130 (291)
Q Consensus 59 ~~~~~~~~vLDiGcG------~G~~~~~l~~~~p-~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~-~~~d~~~~~~~~~ 130 (291)
+.++++.+|||+||| +|. ..+++..+ +.+|+|+|+++. ++++++ +++|+.+.+..++
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~~~~~ 123 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATVHTANK 123 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGCCCSSC
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccCCccCc
Confidence 456789999999994 466 45566665 589999999997 136788 9999998765578
Q ss_pred ccEEEEcccccc-----------cccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 131 YDRIYSIEMFEH-----------MKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 131 ~D~v~~~~~l~~-----------~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
||+|+++...+. ......+++.+.++|||||.+++..+..
T Consensus 124 fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 124 WDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp EEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred ccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 999999754221 1224579999999999999999976543
No 257
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.31 E-value=5.7e-12 Score=112.22 Aligned_cols=102 Identities=16% Similarity=0.077 Sum_probs=86.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCC-CEEEEEcCCHHHHHHHHHHHHHhCCCC--eEEEEccccCCcc---CCCccEEE
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQN--VEIIVADISTFEM---EASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~-~~v~~vD~s~~~~~~a~~~~~~~~~~~--i~~~~~d~~~~~~---~~~~D~v~ 135 (291)
.++.+|||++||+|.+++.++++.++ .+|+++|+++.+++.+++|++.+++++ ++++.+|+.+... .++||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 46789999999999999999987545 689999999999999999999999854 9999999977543 36899999
Q ss_pred EcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 136 SIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 136 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
+++ . .....+++.+.+.|+|||+++++.
T Consensus 131 lDP-~---g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP-F---GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC-S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC-C---cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 987 2 223568899999999999888866
No 258
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.30 E-value=4.2e-11 Score=103.73 Aligned_cols=113 Identities=12% Similarity=-0.038 Sum_probs=88.6
Q ss_pred HHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC----CCc
Q 022810 57 ERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----ASY 131 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~----~~~ 131 (291)
..+...++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.++++++..++++++++.+|+.++... .+|
T Consensus 96 ~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~f 175 (309)
T 2b9e_A 96 MLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEV 175 (309)
T ss_dssp HHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTE
T ss_pred HHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCC
Confidence 34567889999999999999999999874 4579999999999999999999999988899999999876432 579
Q ss_pred cEEEEccccccc------c-----------c-------HHHHHHHHHhccccCeeEEEEeecc
Q 022810 132 DRIYSIEMFEHM------K-----------N-------YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 132 D~v~~~~~l~~~------~-----------~-------~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
|.|+++.+.... + + ...+|+.+.++|+ ||+++.++.+.
T Consensus 176 D~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 176 HYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp EEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred CEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 999986532110 1 1 1346777777786 89888776543
No 259
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.28 E-value=1.8e-11 Score=102.65 Aligned_cols=88 Identities=20% Similarity=0.337 Sum_probs=72.5
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~ 128 (291)
...++.+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++.. .++++++++|+.+.+.+
T Consensus 16 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~~~~ 91 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR--CNFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQFKFP 91 (244)
T ss_dssp HHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGGCCCC
T ss_pred HHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc--CCeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHhCCcc
Confidence 455677778788888999999999999999999998 68999999999999999987753 24899999999987655
Q ss_pred --CCccEEEEccccc
Q 022810 129 --ASYDRIYSIEMFE 141 (291)
Q Consensus 129 --~~~D~v~~~~~l~ 141 (291)
..| .|+++.+++
T Consensus 92 ~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 92 KNQSY-KIFGNIPYN 105 (244)
T ss_dssp SSCCC-EEEEECCGG
T ss_pred cCCCe-EEEEeCCcc
Confidence 344 577776653
No 260
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.27 E-value=2.4e-13 Score=114.28 Aligned_cols=112 Identities=19% Similarity=0.207 Sum_probs=86.9
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC--
Q 022810 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-- 128 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-- 128 (291)
.++.+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.. ..++++++++|+.+.+.+
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~--~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~~~ 92 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI--SKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQFPNK 92 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH--SSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTCCCS
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh--CCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCcccC
Confidence 4566777788888999999999999999999988 6899999999999988887664 234799999999987654
Q ss_pred CCccEEEEcccccccc-----------cHHHHH----HHHHhccccCeeEEEEe
Q 022810 129 ASYDRIYSIEMFEHMK-----------NYQNLL----KKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~-----------~~~~~l----~~~~~~L~pgG~l~i~~ 167 (291)
++| .|+++.++.... .....+ +.+.++|+|||.+.+..
T Consensus 93 ~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 93 QRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp SEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred CCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 578 788876553321 111223 66889999999977644
No 261
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.26 E-value=3.4e-11 Score=102.19 Aligned_cols=89 Identities=20% Similarity=0.251 Sum_probs=75.9
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~ 128 (291)
...++.+++.++..++ +|||||||+|.++..+++. +.+|+++|+++.+++.+++++.. .+++++++|+.+.+.+
T Consensus 33 ~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~--~~~V~avEid~~~~~~l~~~~~~---~~v~vi~~D~l~~~~~ 106 (271)
T 3fut_A 33 EAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA--GAEVTAIEKDLRLRPVLEETLSG---LPVRLVFQDALLYPWE 106 (271)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTTT---SSEEEEESCGGGSCGG
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcCC---CCEEEEECChhhCChh
Confidence 4566778888888888 9999999999999999987 68999999999999999987752 4899999999987765
Q ss_pred --CCccEEEEccccccc
Q 022810 129 --ASYDRIYSIEMFEHM 143 (291)
Q Consensus 129 --~~~D~v~~~~~l~~~ 143 (291)
..+|.|++|.+++..
T Consensus 107 ~~~~~~~iv~NlPy~is 123 (271)
T 3fut_A 107 EVPQGSLLVANLPYHIA 123 (271)
T ss_dssp GSCTTEEEEEEECSSCC
T ss_pred hccCccEEEecCccccc
Confidence 378999999887543
No 262
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.23 E-value=2e-11 Score=105.16 Aligned_cols=89 Identities=21% Similarity=0.236 Sum_probs=75.8
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---
Q 022810 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--- 127 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~--- 127 (291)
+++.+++.+...++.+|||+|||+|.++..+++.+|+.+|+|+|.|+.+++.|++++...+ ++++++++|+.+++.
T Consensus 14 Ll~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~l~ 92 (301)
T 1m6y_A 14 MVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFLLK 92 (301)
T ss_dssp THHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHHHH
Confidence 3455666777788999999999999999999999877899999999999999999988776 589999999987641
Q ss_pred --C-CCccEEEEcccc
Q 022810 128 --E-ASYDRIYSIEMF 140 (291)
Q Consensus 128 --~-~~~D~v~~~~~l 140 (291)
. .+||.|+++...
T Consensus 93 ~~g~~~~D~Vl~D~gv 108 (301)
T 1m6y_A 93 TLGIEKVDGILMDLGV 108 (301)
T ss_dssp HTTCSCEEEEEEECSC
T ss_pred hcCCCCCCEEEEcCcc
Confidence 1 479999987654
No 263
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.22 E-value=1.6e-11 Score=114.29 Aligned_cols=120 Identities=8% Similarity=0.031 Sum_probs=94.3
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC------------------CCEEEEEcCCHHHHHHHHHHHHHhCC
Q 022810 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS------------------NCKITGICNSKTQKEFIEEQCRVLEL 112 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p------------------~~~v~~vD~s~~~~~~a~~~~~~~~~ 112 (291)
....+++.+...++.+|||.|||+|.++..+++... ..+++|+|+++.++..|+.++...++
T Consensus 157 iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi 236 (541)
T 2ar0_A 157 LIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDI 236 (541)
T ss_dssp HHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCC
Confidence 344455666667788999999999999988876421 24799999999999999999888777
Q ss_pred CC-----eEEEEccccCCcc-C-CCccEEEEccccccccc--------------HHHHHHHHHhccccCeeEEEEeecc
Q 022810 113 QN-----VEIIVADISTFEM-E-ASYDRIYSIEMFEHMKN--------------YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 113 ~~-----i~~~~~d~~~~~~-~-~~~D~v~~~~~l~~~~~--------------~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+. +.+.++|....+. . .+||+|++++++..... ...++.++.+.|+|||++.+..+..
T Consensus 237 ~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 237 EGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp CCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 54 7889999876432 2 68999999998865422 2378999999999999998877653
No 264
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.22 E-value=3.9e-11 Score=101.04 Aligned_cols=88 Identities=14% Similarity=0.252 Sum_probs=74.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~ 128 (291)
...++.+++.++..++.+|||||||+|.++..+++. +.+|+++|+++.+++.+++++.. .++++++++|+.+++.+
T Consensus 15 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~~ 90 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDFS 90 (255)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCHH
Confidence 355667788888889999999999999999999987 68999999999999999988764 34899999999987653
Q ss_pred -----CCccEEEEccccc
Q 022810 129 -----ASYDRIYSIEMFE 141 (291)
Q Consensus 129 -----~~~D~v~~~~~l~ 141 (291)
++|| |+++.+++
T Consensus 91 ~~~~~~~~~-vv~NlPY~ 107 (255)
T 3tqs_A 91 SVKTDKPLR-VVGNLPYN 107 (255)
T ss_dssp GSCCSSCEE-EEEECCHH
T ss_pred HhccCCCeE-EEecCCcc
Confidence 3577 78877663
No 265
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.20 E-value=3.2e-11 Score=105.50 Aligned_cols=108 Identities=18% Similarity=0.145 Sum_probs=82.8
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhC---C-----CCeEEEEccccCCcc-----C
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE---L-----QNVEIIVADISTFEM-----E 128 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~---~-----~~i~~~~~d~~~~~~-----~ 128 (291)
.++.+||+||||+|..+..+++.. ..+|++||+++.+++.|++++...+ + ++++++.+|+..+.. .
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~-~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLK-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCEEEEEECChhHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 467899999999999999998775 4899999999999999999875321 1 169999999988542 3
Q ss_pred CCccEEEEcccc---cccc---cHHHHHHHH----HhccccCeeEEEEeecc
Q 022810 129 ASYDRIYSIEMF---EHMK---NYQNLLKKI----SKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 129 ~~~D~v~~~~~l---~~~~---~~~~~l~~~----~~~L~pgG~l~i~~~~~ 170 (291)
++||+|++..+- ...+ ....+++.+ .++|+|||++++...++
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 789999998643 1111 224566666 89999999999876543
No 266
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.17 E-value=2e-10 Score=110.00 Aligned_cols=122 Identities=16% Similarity=0.138 Sum_probs=94.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC------------------------------------------C
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY------------------------------------------S 86 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~------------------------------------------p 86 (291)
+.+...++...+..++..|||.+||+|.+++.++... +
T Consensus 176 e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~ 255 (703)
T 3v97_A 176 ETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEY 255 (703)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccC
Confidence 3455666777777888999999999999999887652 1
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC---CCccEEEEccccccc----ccHHHHHHHHH---h
Q 022810 87 NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME---ASYDRIYSIEMFEHM----KNYQNLLKKIS---K 155 (291)
Q Consensus 87 ~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~~---~~~D~v~~~~~l~~~----~~~~~~l~~~~---~ 155 (291)
..+++|+|+++.+++.|+.|+...|++ .+++.++|+.++..+ ++||+|++|+++..- .+...+++.+. +
T Consensus 256 ~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk 335 (703)
T 3v97_A 256 SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK 335 (703)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHH
T ss_pred CccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHH
Confidence 257999999999999999999999995 499999999987544 289999999987432 23344454444 4
Q ss_pred ccccCeeEEEEeecc
Q 022810 156 WMKEDTLLFVHHFCH 170 (291)
Q Consensus 156 ~L~pgG~l~i~~~~~ 170 (291)
.+.|||.+++.+...
T Consensus 336 ~~~~g~~~~ilt~~~ 350 (703)
T 3v97_A 336 NQFGGWNLSLFSASP 350 (703)
T ss_dssp HHCTTCEEEEEESCH
T ss_pred hhCCCCeEEEEeCCH
Confidence 455899998877654
No 267
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.15 E-value=2.9e-10 Score=106.56 Aligned_cols=129 Identities=15% Similarity=0.177 Sum_probs=91.5
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHHcCC----CCCCEEEEEcCCcchHHH---HHHHHC-CCCEEEEEcCCHHHHHHHHHH
Q 022810 35 CYFSDASKTLEDAEKAMLELYCERSRL----EDGHTVLDVGCGWGSLSL---YIAQKY-SNCKITGICNSKTQKEFIEEQ 106 (291)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~vLDiGcG~G~~~~---~l~~~~-p~~~v~~vD~s~~~~~~a~~~ 106 (291)
..|+.+....+..+.+....+.++... .....|||+|||+|.+.. ..+++. ...+|++||.|+ +...+++.
T Consensus 325 evFEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~ 403 (637)
T 4gqb_A 325 EVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLEN 403 (637)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHH
T ss_pred hhhcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHH
Confidence 345544445556666666666555432 234579999999999844 444442 113789999998 45677888
Q ss_pred HHHhCC-CCeEEEEccccCCccCCCccEEEEccccccc--ccHHHHHHHHHhccccCeeEE
Q 022810 107 CRVLEL-QNVEIIVADISTFEMEASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLF 164 (291)
Q Consensus 107 ~~~~~~-~~i~~~~~d~~~~~~~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~ 164 (291)
.+.++. ++|+++.+|++++..++++|+||+-.+=..+ +...+.+....+.|||||+++
T Consensus 404 v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 404 WQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp HHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred HHhccCCCeEEEEeCcceeccCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 888888 5799999999999888999999996542222 344577888889999999863
No 268
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.14 E-value=6.6e-11 Score=99.91 Aligned_cols=82 Identities=13% Similarity=0.103 Sum_probs=67.6
Q ss_pred cCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCH-------HHHHHHHHHHHHhCCC-CeEEEEccccCCc--cC
Q 022810 59 SRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSK-------TQKEFIEEQCRVLELQ-NVEIIVADISTFE--ME 128 (291)
Q Consensus 59 ~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~-------~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~--~~ 128 (291)
+...++.+|||+|||+|..+..+++. +.+|+++|+|+ .+++.|++++..+++. +++++++|+.+.. .+
T Consensus 79 ~~~~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~ 156 (258)
T 2r6z_A 79 VNHTAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALV 156 (258)
T ss_dssp TTGGGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHH
T ss_pred hCcCCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhh
Confidence 34456789999999999999999986 78999999999 9999999888777663 5999999998752 22
Q ss_pred ---CCccEEEEcccccc
Q 022810 129 ---ASYDRIYSIEMFEH 142 (291)
Q Consensus 129 ---~~~D~v~~~~~l~~ 142 (291)
++||+|++++++.+
T Consensus 157 ~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 157 KTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHCCCSEEEECCCC--
T ss_pred ccCCCccEEEECCCCCC
Confidence 58999999887654
No 269
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.11 E-value=2.2e-10 Score=106.52 Aligned_cols=147 Identities=12% Similarity=0.042 Sum_probs=101.9
Q ss_pred cCCChHHHHHhhCC---CCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-----
Q 022810 15 YELPTSFFKLVLGK---YFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS----- 86 (291)
Q Consensus 15 yd~~~~~y~~~~~~---~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p----- 86 (291)
.|...+.|+.++.. ...-..|.|-.+ ......+++.+...++ +|||.+||+|.+...+++...
T Consensus 202 ~D~lG~~yE~ll~~~a~~~~k~~G~fyTP--------~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~ 272 (544)
T 3khk_A 202 KDILGHVYEYFLGQFALAEGKQGGQYYTP--------KSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANV 272 (544)
T ss_dssp CCSHHHHHHHHHHHHHHTTTCCSTTTCCC--------HHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhhCccCCeEeCC--------HHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccc
Confidence 45666788877742 111111333211 3444555565555555 999999999999888754321
Q ss_pred ----------CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCcc-C-CCccEEEEccccccc----------
Q 022810 87 ----------NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM-E-ASYDRIYSIEMFEHM---------- 143 (291)
Q Consensus 87 ----------~~~v~~vD~s~~~~~~a~~~~~~~~~~-~i~~~~~d~~~~~~-~-~~~D~v~~~~~l~~~---------- 143 (291)
...++|+|+++.++..|+.++...+++ ++.+.++|....+. . .+||+|++++++..-
T Consensus 273 ~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d 352 (544)
T 3khk_A 273 KHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADD 352 (544)
T ss_dssp HTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTC
T ss_pred cccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhh
Confidence 358999999999999999999888873 44447888765432 2 789999999988631
Q ss_pred ---------------c----cHHHHHHHHHhccccCeeEEEEeecc
Q 022810 144 ---------------K----NYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 144 ---------------~----~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+ ..-.++..+.+.|+|||++.+..|..
T Consensus 353 ~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 353 PRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp GGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred hhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 0 01258999999999999998887653
No 270
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.09 E-value=3.1e-10 Score=96.80 Aligned_cols=88 Identities=16% Similarity=0.258 Sum_probs=70.5
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCC--CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN--CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE 126 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~--~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~ 126 (291)
...++.+++.+...++.+|||||||+|.++..+++..+. .+|+++|+|+.+++.++++. .++++++++|+.+++
T Consensus 28 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~~ 103 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTFD 103 (279)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcCC
Confidence 345667778888888999999999999999999988421 23999999999999999883 237999999999876
Q ss_pred cCC-------CccEEEEcccc
Q 022810 127 MEA-------SYDRIYSIEMF 140 (291)
Q Consensus 127 ~~~-------~~D~v~~~~~l 140 (291)
.+. ..+.|++|.++
T Consensus 104 ~~~~~~~~~~~~~~vv~NlPY 124 (279)
T 3uzu_A 104 FGSIARPGDEPSLRIIGNLPY 124 (279)
T ss_dssp GGGGSCSSSSCCEEEEEECCH
T ss_pred hhHhcccccCCceEEEEccCc
Confidence 542 23467887765
No 271
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.09 E-value=7.6e-10 Score=102.70 Aligned_cols=110 Identities=14% Similarity=0.057 Sum_probs=89.1
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHC---CCCEEEEEcCCHHHHHHHHHHHHHhCC--CCeEEEEccccCC--c-c-CCCc
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKY---SNCKITGICNSKTQKEFIEEQCRVLEL--QNVEIIVADISTF--E-M-EASY 131 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~---p~~~v~~vD~s~~~~~~a~~~~~~~~~--~~i~~~~~d~~~~--~-~-~~~~ 131 (291)
..++.+|||.+||+|.+...+++.. +..+++|+|+++.++..|+.++...|+ +++.+.++|.... + . ..+|
T Consensus 219 ~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 219 DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccc
Confidence 3467899999999999999888774 257899999999999999999988888 4688999998765 2 2 2789
Q ss_pred cEEEEcccccccc--------c---------------HHHHHHHHHhccc-cCeeEEEEeecc
Q 022810 132 DRIYSIEMFEHMK--------N---------------YQNLLKKISKWMK-EDTLLFVHHFCH 170 (291)
Q Consensus 132 D~v~~~~~l~~~~--------~---------------~~~~l~~~~~~L~-pgG~l~i~~~~~ 170 (291)
|+|++|+++..-. + .-.++..+.+.|+ |||++.+..+..
T Consensus 299 D~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 299 DGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp SEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred cEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 9999998874210 0 1248999999999 999998887754
No 272
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.05 E-value=1.3e-10 Score=97.82 Aligned_cols=104 Identities=17% Similarity=0.254 Sum_probs=74.1
Q ss_pred HHHHHHcCCCCC--CEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh-------C-C-CCeEEEEcc
Q 022810 53 ELYCERSRLEDG--HTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL-------E-L-QNVEIIVAD 121 (291)
Q Consensus 53 ~~~~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~-------~-~-~~i~~~~~d 121 (291)
+.+++.+.+.++ .+|||+|||+|..+..+++. +++|+++|.++.+.+.++++++.. + + ++++++++|
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D 153 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHAS 153 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESC
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECC
Confidence 445566667777 89999999999999999998 779999999998877777665432 2 3 379999999
Q ss_pred ccCCcc--CCCccEEEEcccccccccHHHHHHHHHhcccc
Q 022810 122 ISTFEM--EASYDRIYSIEMFEHMKNYQNLLKKISKWMKE 159 (291)
Q Consensus 122 ~~~~~~--~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~p 159 (291)
..++.. +.+||+|++++++.+-.. ...+++..+.|++
T Consensus 154 ~~~~L~~~~~~fDvV~lDP~y~~~~~-saavkk~~~~lr~ 192 (258)
T 2oyr_A 154 SLTALTDITPRPQVVYLDPMFPHKQK-SALVKKEMRVFQS 192 (258)
T ss_dssp HHHHSTTCSSCCSEEEECCCCCCCCC------HHHHHHHH
T ss_pred HHHHHHhCcccCCEEEEcCCCCCccc-chHHHHHHHHHHH
Confidence 987432 257999999998865422 2333434444433
No 273
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.05 E-value=1.1e-09 Score=91.82 Aligned_cols=88 Identities=23% Similarity=0.284 Sum_probs=71.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~ 128 (291)
...++.+++.+...++.+|||||||+|.++..+++. +..+|+++|+|+.+++.++++ +..+++++++|+.+++.+
T Consensus 17 ~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~~~~ 91 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI----GDERLEVINEDASKFPFC 91 (249)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTCCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhCChh
Confidence 456677888888888999999999999999999987 248999999999999999876 234799999999988665
Q ss_pred C--CccEEEEccccc
Q 022810 129 A--SYDRIYSIEMFE 141 (291)
Q Consensus 129 ~--~~D~v~~~~~l~ 141 (291)
. ....|+++.+++
T Consensus 92 ~~~~~~~vv~NlPy~ 106 (249)
T 3ftd_A 92 SLGKELKVVGNLPYN 106 (249)
T ss_dssp GSCSSEEEEEECCTT
T ss_pred HccCCcEEEEECchh
Confidence 2 123677777663
No 274
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.04 E-value=3.3e-10 Score=101.17 Aligned_cols=77 Identities=19% Similarity=0.225 Sum_probs=67.5
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh--CCCCeEEEEccccCC-cc-C-CCccEEEEc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--ELQNVEIIVADISTF-EM-E-ASYDRIYSI 137 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~--~~~~i~~~~~d~~~~-~~-~-~~~D~v~~~ 137 (291)
++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|++++... ++++++++++|+.+. .. . ++||+|+++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 5889999999999999999977 789999999999999999999988 777899999999885 22 1 589999998
Q ss_pred cccc
Q 022810 138 EMFE 141 (291)
Q Consensus 138 ~~l~ 141 (291)
++..
T Consensus 171 PPrr 174 (410)
T 3ll7_A 171 PARR 174 (410)
T ss_dssp CEEC
T ss_pred CCCc
Confidence 7653
No 275
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.02 E-value=2e-09 Score=91.70 Aligned_cols=110 Identities=12% Similarity=0.048 Sum_probs=87.8
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh--C---CCCeEEEEccccCCccC--CCccE
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--E---LQNVEIIVADISTFEME--ASYDR 133 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~--~---~~~i~~~~~d~~~~~~~--~~~D~ 133 (291)
.+.+.+||-||.|.|..++.+.+..+..+|+.||+++..++.+++.+... + .++++++.+|...+... ++||+
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 45678999999999999999997766679999999999999999887542 2 25899999999987544 78999
Q ss_pred EEEccccccc----ccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 134 IYSIEMFEHM----KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 134 v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
|+....-..- --..++++.+++.|+|||+++....++
T Consensus 161 Ii~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp 201 (294)
T 3o4f_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp EEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEES
T ss_pred EEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCc
Confidence 9986532111 123679999999999999999876554
No 276
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.01 E-value=3.4e-09 Score=85.56 Aligned_cols=97 Identities=13% Similarity=0.153 Sum_probs=77.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC---CCeEEEEccccCC--------------
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL---QNVEIIVADISTF-------------- 125 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~---~~i~~~~~d~~~~-------------- 125 (291)
+..+|||+|| |..+..+++. ++.+|+.+|.+++..+.|+++++..++ ++++++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred CCCEEEEECc--hHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 4679999998 4688888864 478999999999999999999999885 4799999996542
Q ss_pred -c--------cC--CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 126 -E--------ME--ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 126 -~--------~~--~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
+ .. ++||+|+...-. ....+..+.+.|+|||++++..
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~k-----~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGRF-----RVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSSS-----HHHHHHHHHHHCSSCEEEEETT
T ss_pred HHHHhhhhhccccCCCCCEEEEeCCC-----chhHHHHHHHhcCCCeEEEEeC
Confidence 1 12 689999998743 2355666779999999997743
No 277
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=99.00 E-value=9.9e-10 Score=102.90 Aligned_cols=100 Identities=16% Similarity=0.134 Sum_probs=74.1
Q ss_pred CCEEEEEcCCcchHHHHH---HHHC----------CCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCcc--
Q 022810 64 GHTVLDVGCGWGSLSLYI---AQKY----------SNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM-- 127 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~l---~~~~----------p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~-- 127 (291)
+..|||+|||+|.++... ++.. ...+|++||.|+.++..++.... ++. ++|+++.+|++++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 468999999999996432 2111 13499999999987766555544 666 469999999999876
Q ss_pred ----CCCccEEEEccccccc--ccHHHHHHHHHhccccCeeEE
Q 022810 128 ----EASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLF 164 (291)
Q Consensus 128 ----~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~ 164 (291)
++++|+||+-.+=... +-..+.|..+.+.|||||+++
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 5899999997653222 334578888889999999854
No 278
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.96 E-value=4.9e-10 Score=94.18 Aligned_cols=86 Identities=13% Similarity=0.161 Sum_probs=68.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCE--EEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCK--ITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM 127 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~--v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~ 127 (291)
..++.+++.+...++.+|||||||+|.++. ++ + +.+ |+++|+++.+++.+++++... ++++++++|+.+++.
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~--~~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~~ 81 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-PV-G--ERLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFNF 81 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HH-H--TTCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCCH
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hh-h--CCCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCCH
Confidence 456677777788889999999999999999 65 4 345 999999999999998776432 479999999988754
Q ss_pred CC------CccEEEEccccc
Q 022810 128 EA------SYDRIYSIEMFE 141 (291)
Q Consensus 128 ~~------~~D~v~~~~~l~ 141 (291)
+. ..|.|+++.++.
T Consensus 82 ~~~~~~~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 82 GELAEKMGQPLRVFGNLPYN 101 (252)
T ss_dssp HHHHHHHTSCEEEEEECCTT
T ss_pred HHhhcccCCceEEEECCCCC
Confidence 32 346888887763
No 279
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.91 E-value=8.4e-09 Score=98.10 Aligned_cols=109 Identities=10% Similarity=0.034 Sum_probs=80.8
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCC---CCEEEEEcCCHHHHHHH--HHHHHH----hCCCCeEEEEccccCCcc--CCC
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYS---NCKITGICNSKTQKEFI--EEQCRV----LELQNVEIIVADISTFEM--EAS 130 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p---~~~v~~vD~s~~~~~~a--~~~~~~----~~~~~i~~~~~d~~~~~~--~~~ 130 (291)
.++.+|||.|||+|.++..+++..+ ..+++|+|+++.+++.| +.++.. .+.+...+...|+..... ..+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 4678999999999999999998763 35799999999999999 444433 233334566666665322 278
Q ss_pred ccEEEEccccccc---c--------------------------cHHHHHHHHHhccccCeeEEEEeecc
Q 022810 131 YDRIYSIEMFEHM---K--------------------------NYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 131 ~D~v~~~~~l~~~---~--------------------------~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
||+|++|+++... + -...++..+.+.|+|||++.+..|..
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 9999999998321 0 02347888999999999999987764
No 280
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.86 E-value=1.6e-08 Score=89.43 Aligned_cols=125 Identities=13% Similarity=0.103 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHcCCCC-----CCEEEEEcCCcchHHHHHHH--------HC-------CCCEEEEEcCCHHHHHHHHHHH
Q 022810 48 EKAMLELYCERSRLED-----GHTVLDVGCGWGSLSLYIAQ--------KY-------SNCKITGICNSKTQKEFIEEQC 107 (291)
Q Consensus 48 ~~~~~~~~~~~~~~~~-----~~~vLDiGcG~G~~~~~l~~--------~~-------p~~~v~~vD~s~~~~~~a~~~~ 107 (291)
...++...++.+...+ ..+|+|+|||+|.++..+.. ++ |..+|...|+........-+.+
T Consensus 32 ~~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L 111 (374)
T 3b5i_A 32 MLHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLL 111 (374)
T ss_dssp HHHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHS
T ss_pred HHHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhh
Confidence 3555666666665543 57899999999999888732 22 5678899997776554433322
Q ss_pred HHhC-----------C-CCeEEEEcc---ccCCccC-CCccEEEEcccccccc---------------------------
Q 022810 108 RVLE-----------L-QNVEIIVAD---ISTFEME-ASYDRIYSIEMFEHMK--------------------------- 144 (291)
Q Consensus 108 ~~~~-----------~-~~i~~~~~d---~~~~~~~-~~~D~v~~~~~l~~~~--------------------------- 144 (291)
.... . .+-.|+.+. +-.-.++ +++|+|+|+.++|++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~ 191 (374)
T 3b5i_A 112 PPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEK 191 (374)
T ss_dssp CCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHH
T ss_pred hhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHH
Confidence 2110 0 011233332 2222334 8999999999999985
Q ss_pred -----------cHHHHHHHHHhccccCeeEEEEeeccCC
Q 022810 145 -----------NYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 145 -----------~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 172 (291)
|...+|+...+.|+|||.+++...+..+
T Consensus 192 v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 192 TTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCC
Confidence 4455788889999999999999988765
No 281
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.81 E-value=2.4e-09 Score=89.51 Aligned_cols=118 Identities=19% Similarity=0.269 Sum_probs=77.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~- 128 (291)
.++..+.++..+.++.+|||||||+|..+..++++.+...++++|++.......... ...+. ++..+..+++.....
T Consensus 61 ~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g~-~ii~~~~~~dv~~l~~ 138 (277)
T 3evf_A 61 AKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLGW-NIITFKDKTDIHRLEP 138 (277)
T ss_dssp HHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTTG-GGEEEECSCCTTTSCC
T ss_pred HHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCCC-CeEEEeccceehhcCC
Confidence 345566666667788899999999999999988765445788888874421000000 00011 455566665444444
Q ss_pred CCccEEEEccccc----ccccH--HHHHHHHHhccccC-eeEEEEeec
Q 022810 129 ASYDRIYSIEMFE----HMKNY--QNLLKKISKWMKED-TLLFVHHFC 169 (291)
Q Consensus 129 ~~~D~v~~~~~l~----~~~~~--~~~l~~~~~~L~pg-G~l~i~~~~ 169 (291)
++||+|+|..+.+ .++.. ..+++.+.++|+|| |.+++..+.
T Consensus 139 ~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 139 VKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 7899999987655 12211 13568889999999 999997775
No 282
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.81 E-value=2e-08 Score=88.38 Aligned_cols=114 Identities=15% Similarity=0.033 Sum_probs=90.9
Q ss_pred HHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC------CCeEEEEccccCCcc--C
Q 022810 57 ERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL------QNVEIIVADISTFEM--E 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~------~~i~~~~~d~~~~~~--~ 128 (291)
..++.++|.+|||+++|.|+=+.++++..++..|+++|+++..+..++++++..+. .++.+...|...+.. .
T Consensus 142 ~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~ 221 (359)
T 4fzv_A 142 LALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEG 221 (359)
T ss_dssp HHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHST
T ss_pred HHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhcc
Confidence 34678899999999999999999999886566899999999999999999987754 368888899877642 2
Q ss_pred CCccEEEEcccccc-----c---c----------------cHHHHHHHHHhccccCeeEEEEeecc
Q 022810 129 ASYDRIYSIEMFEH-----M---K----------------NYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 129 ~~~D~v~~~~~l~~-----~---~----------------~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
+.||.|++..+-.. + + -..++|..+.+.|||||+|+-++.+.
T Consensus 222 ~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 222 DTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp TCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred ccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 78999998664321 0 0 13468889999999999998877654
No 283
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.75 E-value=6.9e-08 Score=89.56 Aligned_cols=146 Identities=15% Similarity=0.126 Sum_probs=103.3
Q ss_pred CCChHHHHHhhCC---CCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-------
Q 022810 16 ELPTSFFKLVLGK---YFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY------- 85 (291)
Q Consensus 16 d~~~~~y~~~~~~---~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~------- 85 (291)
|...+.|+.++.. ... ..|.|-.+ ...++.+++.+...++.+|+|.+||+|.+...+.+..
T Consensus 176 d~lG~~yE~ll~~~~~~~g-~~GqfyTP--------~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~ 246 (530)
T 3ufb_A 176 HTLSRLYETMLREMRDAAG-DSGEFYTP--------RPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTV 246 (530)
T ss_dssp HHHHHHHHHHHHHHTTSSS-SCCCCCCC--------HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSH
T ss_pred HHHHHHHHHHHHHHHHhcC-cCceECCc--------HHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccch
Confidence 4456788888742 111 12333222 3556667777778888999999999999988775431
Q ss_pred ------CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-----CCccEEEEcccccccc----------
Q 022810 86 ------SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-----ASYDRIYSIEMFEHMK---------- 144 (291)
Q Consensus 86 ------p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-----~~~D~v~~~~~l~~~~---------- 144 (291)
....++|+|+++.+...|+-++.-.|.+...+.++|....+.. .+||+|++++++..-.
T Consensus 247 ~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~ 326 (530)
T 3ufb_A 247 EDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPE 326 (530)
T ss_dssp HHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCG
T ss_pred hHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCch
Confidence 1246999999999999999998888886667778887654321 5799999999984221
Q ss_pred ------cHHHHHHHHHhccc-------cCeeEEEEeecc
Q 022810 145 ------NYQNLLKKISKWMK-------EDTLLFVHHFCH 170 (291)
Q Consensus 145 ------~~~~~l~~~~~~L~-------pgG~l~i~~~~~ 170 (291)
....++..+.+.|| |||++.+..|..
T Consensus 327 ~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g 365 (530)
T 3ufb_A 327 DMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNG 365 (530)
T ss_dssp GGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHH
T ss_pred hcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecch
Confidence 12346777777776 799998887753
No 284
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.70 E-value=1.3e-07 Score=71.22 Aligned_cols=114 Identities=19% Similarity=0.197 Sum_probs=75.1
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcc-hHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh
Q 022810 32 YSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWG-SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL 110 (291)
Q Consensus 32 y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G-~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~ 110 (291)
.+++...... .| .+.+.+.+.+.. .++.+|||||||.| ..+..|++.. +..|+++|+++..++
T Consensus 10 ~~~~~~~~~~-~m---~e~LaeYI~~~~--~~~~rVlEVG~G~g~~vA~~La~~~-g~~V~atDInp~Av~--------- 73 (153)
T 2k4m_A 10 HSSGLVPRGS-HM---WNDLAVYIIRCS--GPGTRVVEVGAGRFLYVSDYIRKHS-KVDLVLTDIKPSHGG--------- 73 (153)
T ss_dssp CCCCCCCCCC-HH---HHHHHHHHHHHS--CSSSEEEEETCTTCCHHHHHHHHHS-CCEEEEECSSCSSTT---------
T ss_pred ccCCcccchh-hH---HHHHHHHHHhcC--CCCCcEEEEccCCChHHHHHHHHhC-CCeEEEEECCccccc---------
Confidence 3445554332 23 334445555544 35679999999999 5999999744 899999999998543
Q ss_pred CCCCeEEEEccccCCccC--CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022810 111 ELQNVEIIVADISTFEME--ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 111 ~~~~i~~~~~d~~~~~~~--~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 172 (291)
+++.|+.+.... ..||+|.+..+= ++....+.++.+ +-|.-++|...+.+.
T Consensus 74 ------~v~dDiF~P~~~~Y~~~DLIYsirPP---~El~~~i~~lA~--~v~adliI~pL~~E~ 126 (153)
T 2k4m_A 74 ------IVRDDITSPRMEIYRGAALIYSIRPP---AEIHSSLMRVAD--AVGARLIIKPLTGED 126 (153)
T ss_dssp ------EECCCSSSCCHHHHTTEEEEEEESCC---TTTHHHHHHHHH--HHTCEEEEECBTTBC
T ss_pred ------eEEccCCCCcccccCCcCEEEEcCCC---HHHHHHHHHHHH--HcCCCEEEEcCCCCc
Confidence 788999885544 689999776543 233444444444 246677776555443
No 285
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.63 E-value=1e-08 Score=85.87 Aligned_cols=118 Identities=22% Similarity=0.281 Sum_probs=76.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~- 128 (291)
-++..+.++..+.++.+|||||||+|..+..++++.+...|+|+|++..+...+... ...+. ++.....++.....+
T Consensus 77 fKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g~-~ii~~~~~~dv~~l~~ 154 (282)
T 3gcz_A 77 AKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLGW-NLIRFKDKTDVFNMEV 154 (282)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTTG-GGEEEECSCCGGGSCC
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCCC-ceEEeeCCcchhhcCC
Confidence 345566666677888999999999999999998765556799999976532111100 00111 333344333322223
Q ss_pred CCccEEEEccccc----ccccH--HHHHHHHHhccccC--eeEEEEeec
Q 022810 129 ASYDRIYSIEMFE----HMKNY--QNLLKKISKWMKED--TLLFVHHFC 169 (291)
Q Consensus 129 ~~~D~v~~~~~l~----~~~~~--~~~l~~~~~~L~pg--G~l~i~~~~ 169 (291)
.++|+|+|..... .++.. ..+++-+.++|+|| |.|++..+.
T Consensus 155 ~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 155 IPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 7899999987665 11111 23577778999999 999998775
No 286
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.63 E-value=2.1e-07 Score=79.08 Aligned_cols=118 Identities=8% Similarity=0.024 Sum_probs=87.6
Q ss_pred HHHHHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHC-----CCCEEEEEcCCH-------------------------
Q 022810 49 KAMLELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKY-----SNCKITGICNSK------------------------- 97 (291)
Q Consensus 49 ~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-----p~~~v~~vD~s~------------------------- 97 (291)
...+..+++.+. ...+..|||+|+..|..+..++... ++.+|+++|..+
T Consensus 91 ~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~ 170 (282)
T 2wk1_A 91 LENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVL 170 (282)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccc
Confidence 344455554432 2345699999999999999987653 467899999642
Q ss_pred -HHHHHHHHHHHHhCC--CCeEEEEccccCCcc---CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 98 -TQKEFIEEQCRVLEL--QNVEIIVADISTFEM---EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 98 -~~~~~a~~~~~~~~~--~~i~~~~~d~~~~~~---~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
..++.+++++++.|+ ++|+++.+|+.+... .++||+|+...-. -......++.+...|+|||++++...
T Consensus 171 ~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 171 AVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred hhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 146778999999887 689999999976432 2689999998643 13456789999999999999988554
No 287
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.61 E-value=6.4e-08 Score=81.41 Aligned_cols=104 Identities=13% Similarity=0.102 Sum_probs=72.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHH-------CCC-----CEEEEEcCCH---HHHH-----------HHHHHHHHh-----
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQK-------YSN-----CKITGICNSK---TQKE-----------FIEEQCRVL----- 110 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~-------~p~-----~~v~~vD~s~---~~~~-----------~a~~~~~~~----- 110 (291)
.++.+|||+|+|+|..+..+++. .|. .+++++|..+ +.+. .++++....
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 35679999999999998887654 453 5899999876 3333 555555431
Q ss_pred ---------CCCCeEEEEccccCCccC--C----CccEEEEccc-cccccc--HHHHHHHHHhccccCeeEEE
Q 022810 111 ---------ELQNVEIIVADISTFEME--A----SYDRIYSIEM-FEHMKN--YQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 111 ---------~~~~i~~~~~d~~~~~~~--~----~~D~v~~~~~-l~~~~~--~~~~l~~~~~~L~pgG~l~i 165 (291)
+..+++++.+|+.+.... . .||+|+.... -...++ ...+++.+.+.|+|||+|+.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 113678999998773221 2 7999999642 111222 36799999999999999875
No 288
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.57 E-value=8.2e-08 Score=84.94 Aligned_cols=107 Identities=14% Similarity=0.086 Sum_probs=74.7
Q ss_pred CCEEEEEcCCcchHHHHHHHH-----------------CCCCEEEEEcCC-----------HHHHHHHHHHHHHhCC-CC
Q 022810 64 GHTVLDVGCGWGSLSLYIAQK-----------------YSNCKITGICNS-----------KTQKEFIEEQCRVLEL-QN 114 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~l~~~-----------------~p~~~v~~vD~s-----------~~~~~~a~~~~~~~~~-~~ 114 (291)
..+|+|+||++|.++..+... .|..+|...|+. +...+.++ +..+. .+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~---~~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLE---KENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHH---HHTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhh---hhccCCCC
Confidence 578999999999999888765 255788999976 33322221 12221 13
Q ss_pred eEEEEccccCC---ccC-CCccEEEEcccccccccHH---------------------------------------HHHH
Q 022810 115 VEIIVADISTF---EME-ASYDRIYSIEMFEHMKNYQ---------------------------------------NLLK 151 (291)
Q Consensus 115 i~~~~~d~~~~---~~~-~~~D~v~~~~~l~~~~~~~---------------------------------------~~l~ 151 (291)
..|+.+....+ .++ +++|+|+++.++||+.+.+ .+|+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45666655442 344 8999999999999984332 1266
Q ss_pred HHHhccccCeeEEEEeeccCCc
Q 022810 152 KISKWMKEDTLLFVHHFCHKTF 173 (291)
Q Consensus 152 ~~~~~L~pgG~l~i~~~~~~~~ 173 (291)
...+.|+|||.+++...+..+.
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~ 231 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDE 231 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTT
T ss_pred HHHHHhccCCeEEEEEecCCCc
Confidence 6689999999999999987664
No 289
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.57 E-value=9.3e-08 Score=80.45 Aligned_cols=84 Identities=8% Similarity=0.093 Sum_probs=70.6
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---
Q 022810 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--- 127 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~--- 127 (291)
+++.+++.+.+.++..+||.+||.|.++..++++ +.+|+|+|.++.+++.+++ +.. ++++++++++.++..
T Consensus 10 Ll~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L~ 83 (285)
T 1wg8_A 10 LYQEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHLA 83 (285)
T ss_dssp THHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHHH
T ss_pred HHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHHH
Confidence 4567777788888999999999999999999987 7899999999999999887 533 489999999988642
Q ss_pred --C-CCccEEEEcccc
Q 022810 128 --E-ASYDRIYSIEMF 140 (291)
Q Consensus 128 --~-~~~D~v~~~~~l 140 (291)
. .++|.|+++..+
T Consensus 84 ~~g~~~vDgIL~DLGv 99 (285)
T 1wg8_A 84 ALGVERVDGILADLGV 99 (285)
T ss_dssp HTTCSCEEEEEEECSC
T ss_pred HcCCCCcCEEEeCCcc
Confidence 1 579999987654
No 290
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.52 E-value=2.8e-07 Score=80.91 Aligned_cols=106 Identities=15% Similarity=0.101 Sum_probs=80.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh-----CC---CCeEEEEccccCCcc-----C
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL-----EL---QNVEIIVADISTFEM-----E 128 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~-----~~---~~i~~~~~d~~~~~~-----~ 128 (291)
.++.+||-||.|.|..++.+.+. |..+|+.||+++..++.+++.+... .. ++++++.+|+..+.. .
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 35689999999999999999875 5689999999999999999865321 11 358999999876532 2
Q ss_pred CCccEEEEccccccc----------ccHHHHHHHHHhccccCeeEEEEee
Q 022810 129 ASYDRIYSIEMFEHM----------KNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~----------~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
++||+|+....-... .-..++++.+++.|+|||+++.+.-
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 689999987432110 1135788999999999999987643
No 291
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.41 E-value=9.8e-08 Score=83.75 Aligned_cols=111 Identities=11% Similarity=0.026 Sum_probs=79.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHH----------------CCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccC-
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQK----------------YSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADIST- 124 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~----------------~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~- 124 (291)
...+|+|+||++|.++..+... .|..+|+..|+..+....+-+.+..... ++..|+.+....
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3468999999999887765443 3557899999888877666554432100 123455554433
Q ss_pred --CccC-CCccEEEEccccccccc---------------------------------HHHHHHHHHhccccCeeEEEEee
Q 022810 125 --FEME-ASYDRIYSIEMFEHMKN---------------------------------YQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 125 --~~~~-~~~D~v~~~~~l~~~~~---------------------------------~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
-.++ +++|+|+|+.++||+.+ ...+|+...+.|+|||.+++...
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 3344 89999999999999843 23358888999999999999999
Q ss_pred ccCCc
Q 022810 169 CHKTF 173 (291)
Q Consensus 169 ~~~~~ 173 (291)
+..+.
T Consensus 211 gr~~~ 215 (359)
T 1m6e_X 211 GRRSE 215 (359)
T ss_dssp ECSSS
T ss_pred cCCCC
Confidence 88664
No 292
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.36 E-value=1.7e-06 Score=75.69 Aligned_cols=86 Identities=13% Similarity=0.171 Sum_probs=63.4
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEccc
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEM 139 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~~~ 139 (291)
+.+|+++|||||.+|+.+..++++ +.+|++||+.+-. ..+.. .++|+++++|+....++ .++|+|+|..+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~-----~~l~~--~~~V~~~~~d~~~~~~~~~~~D~vvsDm~ 279 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMA-----QSLMD--TGQVTWLREDGFKFRPTRSNISWMVCDMV 279 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCC-----HHHHT--TTCEEEECSCTTTCCCCSSCEEEEEECCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcC-----hhhcc--CCCeEEEeCccccccCCCCCcCEEEEcCC
Confidence 568999999999999999999988 8899999976421 11222 24799999999988766 78999999765
Q ss_pred ccccccHHHHHHHHHhcccc
Q 022810 140 FEHMKNYQNLLKKISKWMKE 159 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~L~p 159 (291)
. ++...+..+.+.|..
T Consensus 280 ~----~p~~~~~l~~~wl~~ 295 (375)
T 4auk_A 280 E----KPAKVAALMAQWLVN 295 (375)
T ss_dssp S----CHHHHHHHHHHHHHT
T ss_pred C----ChHHhHHHHHHHHhc
Confidence 5 334444444444433
No 293
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.27 E-value=4.3e-06 Score=70.17 Aligned_cols=118 Identities=20% Similarity=0.296 Sum_probs=80.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEc-cccCCccC
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA-DISTFEME 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~-d~~~~~~~ 128 (291)
.++..+.++..+.++.+||||||++|..+.+++.......|+|+|+...-.+. -......+.+-+.++.+ |+..++.
T Consensus 81 ~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~-P~~~~ql~w~lV~~~~~~Dv~~l~~- 158 (321)
T 3lkz_A 81 AKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEE-PQLVQSYGWNIVTMKSGVDVFYRPS- 158 (321)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCC-CCCCCBTTGGGEEEECSCCTTSSCC-
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccC-cchhhhcCCcceEEEeccCHhhCCC-
Confidence 45666777777788899999999999999988877534469999987651100 00001112223788887 8877654
Q ss_pred CCccEEEEcccccccccH-------HHHHHHHHhccccC-eeEEEEeecc
Q 022810 129 ASYDRIYSIEMFEHMKNY-------QNLLKKISKWMKED-TLLFVHHFCH 170 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~-------~~~l~~~~~~L~pg-G~l~i~~~~~ 170 (291)
.++|+|+|.-. +.-+++ -.+|+-+.+.|++| |-+++-.+++
T Consensus 159 ~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 159 ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 67999999765 333321 22666667889988 8888877765
No 294
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.23 E-value=1.1e-05 Score=67.99 Aligned_cols=116 Identities=20% Similarity=0.254 Sum_probs=72.0
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-C
Q 022810 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-A 129 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~ 129 (291)
++..+.++--+.++.+||||||++|..+..++++.+...|+|+|+...+...... ....+. ++.....++...... .
T Consensus 69 KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~~l~~~ 146 (300)
T 3eld_A 69 KIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVFTMPTE 146 (300)
T ss_dssp HHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTTTSCCC
T ss_pred HHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCC-ceEEeecCceeeecCCC
Confidence 3444445533468899999999999999999986544579999987532100000 000011 333333333222223 7
Q ss_pred CccEEEEcccccccc----c---HHHHHHHHHhccccC-eeEEEEeec
Q 022810 130 SYDRIYSIEMFEHMK----N---YQNLLKKISKWMKED-TLLFVHHFC 169 (291)
Q Consensus 130 ~~D~v~~~~~l~~~~----~---~~~~l~~~~~~L~pg-G~l~i~~~~ 169 (291)
++|+|+|...-. .. | ...++.-+.++|+|| |.|++..+.
T Consensus 147 ~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 147 PSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 899999976554 21 1 134577778999999 999998775
No 295
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.23 E-value=5e-06 Score=71.42 Aligned_cols=59 Identities=17% Similarity=0.071 Sum_probs=50.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhC
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE 111 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~ 111 (291)
.++..++.... .++..|||++||+|..+..+++. +.+++|+|+++.+++.|++++....
T Consensus 223 ~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 223 ELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp HHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 45566666555 67889999999999999998876 7899999999999999999987753
No 296
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.21 E-value=2.9e-06 Score=68.86 Aligned_cols=119 Identities=18% Similarity=0.255 Sum_probs=80.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEc-cccCCccC
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA-DISTFEME 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~-d~~~~~~~ 128 (291)
-++..+.++..+.++.+||||||++|..+.+++......+|+|+|+-..-.+. -......|.+.++|+.+ |+...+.
T Consensus 65 ~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-P~~~~s~gwn~v~fk~gvDv~~~~~- 142 (267)
T 3p8z_A 65 AKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-PVPMSTYGWNIVKLMSGKDVFYLPP- 142 (267)
T ss_dssp HHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-CCCCCCTTTTSEEEECSCCGGGCCC-
T ss_pred HHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-cchhhhcCcCceEEEeccceeecCC-
Confidence 45666777667789999999999999999988877644579999987652210 00111234456999999 9866544
Q ss_pred CCccEEEEccccccc-c--cH---HHHHHHHHhccccCeeEEEEeeccC
Q 022810 129 ASYDRIYSIEMFEHM-K--NY---QNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~-~--~~---~~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
.++|.|+|.-.=..- + +. -.+|+-+.++|++ |-+++-.+++.
T Consensus 143 ~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py 190 (267)
T 3p8z_A 143 EKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPY 190 (267)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCC
T ss_pred ccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCC
Confidence 779999996422111 1 11 2266667889998 78888776553
No 297
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.07 E-value=2e-06 Score=70.92 Aligned_cols=117 Identities=20% Similarity=0.244 Sum_probs=70.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH-hCCCCeEEEEc-cccCCcc
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV-LELQNVEIIVA-DISTFEM 127 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~-~~~~~i~~~~~-d~~~~~~ 127 (291)
-++..+-++.-++++.+||||||+.|..+..++++.+-..|.|.++.... . ....... .|+.-+.++++ |+.++.
T Consensus 60 yKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~~P~~~~~~Gv~~i~~~~G~Df~~~~- 136 (269)
T 2px2_A 60 AKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-EEPMLMQSYGWNIVTMKSGVDVFYKP- 136 (269)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-CCCCCCCSTTGGGEEEECSCCGGGSC-
T ss_pred HHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-cCCCcccCCCceEEEeeccCCccCCC-
Confidence 34556666655688999999999999999999876211133344333220 0 0000000 11112356557 998743
Q ss_pred CCCccEEEEccccc-cc--ccHH---HHHHHHHhccccCe-eEEEEeec
Q 022810 128 EASYDRIYSIEMFE-HM--KNYQ---NLLKKISKWMKEDT-LLFVHHFC 169 (291)
Q Consensus 128 ~~~~D~v~~~~~l~-~~--~~~~---~~l~~~~~~L~pgG-~l~i~~~~ 169 (291)
+.++|+|+|...=. .. -|.. .++.-+.++|+||| .+++-.+.
T Consensus 137 ~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 137 SEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 35899999976322 11 1222 25666778999999 89887776
No 298
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.98 E-value=8.7e-06 Score=70.08 Aligned_cols=88 Identities=14% Similarity=0.106 Sum_probs=71.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM- 127 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~- 127 (291)
.+++.+++.+.+.++..++|..||.|..+..++++. |..+|+|+|.++.+++.++ ++ ..++++++++++.++..
T Consensus 44 VLl~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---~~~Rv~lv~~nF~~l~~~ 119 (347)
T 3tka_A 44 VLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---DDPRFSIIHGPFSALGEY 119 (347)
T ss_dssp TTTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---CCTTEEEEESCGGGHHHH
T ss_pred ccHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---cCCcEEEEeCCHHHHHHH
Confidence 367788888999999999999999999999999875 6789999999999998884 32 22589999999887631
Q ss_pred ----C--CCccEEEEccccc
Q 022810 128 ----E--ASYDRIYSIEMFE 141 (291)
Q Consensus 128 ----~--~~~D~v~~~~~l~ 141 (291)
. +++|.|+.+.-+.
T Consensus 120 L~~~g~~~~vDgILfDLGVS 139 (347)
T 3tka_A 120 VAERDLIGKIDGILLDLGVS 139 (347)
T ss_dssp HHHTTCTTCEEEEEEECSCC
T ss_pred HHhcCCCCcccEEEECCccC
Confidence 1 2689998876553
No 299
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.83 E-value=4.6e-06 Score=70.22 Aligned_cols=103 Identities=12% Similarity=-0.004 Sum_probs=80.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc----cC-CCccEEEEc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----ME-ASYDRIYSI 137 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~----~~-~~~D~v~~~ 137 (291)
.+..+||+-+|+|.+++.+.+. +.+++.+|.++..++..++++.. .++++++..|..... .+ .+||+|++.
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiD 166 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALLPPPEKRGLIFID 166 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHCSCTTSCEEEEEC
T ss_pred cCCCceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhcCCCCCccEEEEC
Confidence 3567999999999999999874 78999999999999888888754 247999999975521 22 579999999
Q ss_pred ccccccccHHHHHHHHHh--ccccCeeEEEEeec
Q 022810 138 EMFEHMKNYQNLLKKISK--WMKEDTLLFVHHFC 169 (291)
Q Consensus 138 ~~l~~~~~~~~~l~~~~~--~L~pgG~l~i~~~~ 169 (291)
+++..-.+...+++.+.+ .+.|+|++++=.|.
T Consensus 167 PPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi 200 (283)
T 2oo3_A 167 PSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPV 200 (283)
T ss_dssp CCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEec
Confidence 999755567777776655 45699998885443
No 300
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.83 E-value=5e-05 Score=66.44 Aligned_cols=74 Identities=16% Similarity=0.178 Sum_probs=59.6
Q ss_pred HHHHHHHHHHcCCCC------CCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccc
Q 022810 49 KAMLELYCERSRLED------GHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADI 122 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~------~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~ 122 (291)
...++.+++.+++.+ +..|||||.|.|.++..|++.....+|+++|+++..+...++.. . .++++++.+|+
T Consensus 38 ~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~--~~~l~ii~~D~ 114 (353)
T 1i4w_A 38 PTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E--GSPLQILKRDP 114 (353)
T ss_dssp HHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T--TSSCEEECSCT
T ss_pred HHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c--CCCEEEEECCc
Confidence 455667777776653 58999999999999999998643468999999999998888766 2 35899999999
Q ss_pred cCC
Q 022810 123 STF 125 (291)
Q Consensus 123 ~~~ 125 (291)
.++
T Consensus 115 l~~ 117 (353)
T 1i4w_A 115 YDW 117 (353)
T ss_dssp TCH
T ss_pred cch
Confidence 665
No 301
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.82 E-value=9.1e-05 Score=62.16 Aligned_cols=99 Identities=13% Similarity=0.059 Sum_probs=68.5
Q ss_pred CCCCCCEEEEEcC------CcchHHHHHHHHCCC-CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCcc
Q 022810 60 RLEDGHTVLDVGC------GWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYD 132 (291)
Q Consensus 60 ~~~~~~~vLDiGc------G~G~~~~~l~~~~p~-~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D 132 (291)
..+.+++|||+|+ -.|. ..+.+..|. ..|+++|+.+-.. ... .++++|+.......+||
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s-----------da~-~~IqGD~~~~~~~~k~D 171 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS-----------DAD-STLIGDCATVHTANKWD 171 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC-----------SSS-EEEESCGGGEEESSCEE
T ss_pred eecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc-----------CCC-eEEEccccccccCCCCC
Confidence 4567999999996 4566 345555664 6999999977420 113 45999987765558899
Q ss_pred EEEEcccccc---c--c------cHHHHHHHHHhccccCeeEEEEeeccCC
Q 022810 133 RIYSIEMFEH---M--K------NYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 133 ~v~~~~~l~~---~--~------~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 172 (291)
+|+|...-.. . . -.+.++.-+.+.|+|||.|++-.+....
T Consensus 172 LVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 172 LIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp EEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred EEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 9999653211 1 1 1355677788899999999998765443
No 302
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.79 E-value=5.2e-05 Score=63.71 Aligned_cols=59 Identities=17% Similarity=0.103 Sum_probs=48.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhC
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE 111 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~ 111 (291)
.++..+++... .++..|||..||+|..+....+. +.+++|+|+++..++.++++++..+
T Consensus 200 ~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 200 DLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 45566665543 67889999999999999998877 8899999999999999999987654
No 303
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.54 E-value=2.5e-05 Score=84.21 Aligned_cols=104 Identities=15% Similarity=0.091 Sum_probs=57.4
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCC-----CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC-c-cCCCccEE
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYS-----NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-E-MEASYDRI 134 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p-----~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~-~-~~~~~D~v 134 (291)
.+..+|||||.|+|..+..+.+... ..+++..|+|+...+.++++++.. ++.....|..+. . .++.||+|
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~---di~~~~~d~~~~~~~~~~~ydlv 1315 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL---HVTQGQWDPANPAPGSLGKADLL 1315 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---TEEEECCCSSCCCC-----CCEE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---ccccccccccccccCCCCceeEE
Confidence 3578999999999987776665532 237899999998888888777654 233322233322 1 22679999
Q ss_pred EEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 135 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 135 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
++..++|..++....+.+++++|||||.+++...
T Consensus 1316 ia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1316 VCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp EEECC--------------------CCEEEEEEC
T ss_pred EEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 9999998888889999999999999999888654
No 304
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.34 E-value=0.0055 Score=53.20 Aligned_cols=105 Identities=16% Similarity=0.152 Sum_probs=79.0
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhC---------------------CCCeEEEEc
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE---------------------LQNVEIIVA 120 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~---------------------~~~i~~~~~ 120 (291)
.+...|+.||||.......+....++..++-||. |..++.-++.+.+.+ -++..++.+
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 3567999999999999999987766788888888 888877777666541 147889999
Q ss_pred cccCCcc---------C-CCccEEEEccccccc--ccHHHHHHHHHhccccCeeEEEEee
Q 022810 121 DISTFEM---------E-ASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 121 d~~~~~~---------~-~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
|+.+... . ....++++-.++.++ +....+++.+.+.. |+|.+++.+.
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~ 233 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDP 233 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEE
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEec
Confidence 9987321 2 456889999999999 44667888888766 7777654443
No 305
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.05 E-value=0.0022 Score=57.34 Aligned_cols=64 Identities=9% Similarity=0.123 Sum_probs=53.2
Q ss_pred CCCCCEEEEEcCCcchHHHHHH-HHCCC-CEEEEEcCCHHHHHHHHHHHHH---hCC-CCeEEEEccccC
Q 022810 61 LEDGHTVLDVGCGWGSLSLYIA-QKYSN-CKITGICNSKTQKEFIEEQCRV---LEL-QNVEIIVADIST 124 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~l~-~~~p~-~~v~~vD~s~~~~~~a~~~~~~---~~~-~~i~~~~~d~~~ 124 (291)
+.++..|+|+|++.|..+..++ +..+. .+|+++|+++...+.++++... ++. ++++++..-+.+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~ 293 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGE 293 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECS
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEEC
Confidence 4688999999999999999988 55543 7999999999999999999987 345 578887776655
No 306
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.97 E-value=0.0052 Score=51.14 Aligned_cols=114 Identities=11% Similarity=0.125 Sum_probs=75.3
Q ss_pred HHHHHcCCCCCCEEEEEcCCcchHHHHHHHH-------CCCCEEEEEc-----CCHH-------------------HHHH
Q 022810 54 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-------YSNCKITGIC-----NSKT-------------------QKEF 102 (291)
Q Consensus 54 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-------~p~~~v~~vD-----~s~~-------------------~~~~ 102 (291)
.+.+.+...+| .|+|+||-.|..+..+++. .+..+|+++| +.+. ..+.
T Consensus 61 ~l~~~i~~vpG-~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~ 139 (257)
T 3tos_A 61 ALYRQVLDVPG-VIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAY 139 (257)
T ss_dssp HHHHHTTTSCS-EEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHH
T ss_pred HHHHHhhCCCC-eEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHH
Confidence 34444433344 8999999999988887652 2457899999 3211 0111
Q ss_pred HHHHH------HHhCC--CCeEEEEccccCCcc------C-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 103 IEEQC------RVLEL--QNVEIIVADISTFEM------E-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 103 a~~~~------~~~~~--~~i~~~~~d~~~~~~------~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
.++.+ +..+. ++++++.+++.+... + .++|+|....-. -......++.+...|+|||++++..
T Consensus 140 l~~~l~~~~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 140 LKEVLDAHECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDE 217 (257)
T ss_dssp HHHHHHHHHTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred HHHHHHHHhhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcC
Confidence 12111 12233 579999999987421 2 469999998742 2445668899999999999999977
Q ss_pred ecc
Q 022810 168 FCH 170 (291)
Q Consensus 168 ~~~ 170 (291)
.+.
T Consensus 218 ~~~ 220 (257)
T 3tos_A 218 LDN 220 (257)
T ss_dssp TTC
T ss_pred CCC
Confidence 643
No 307
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.88 E-value=0.003 Score=55.07 Aligned_cols=95 Identities=18% Similarity=0.151 Sum_probs=67.6
Q ss_pred HHHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEE
Q 022810 56 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRI 134 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v 134 (291)
+....++++.+||-+|+|. |..+..+++.. +++|++++.+++..+.+++ .|.+.+ + .+...+. ..+|+|
T Consensus 169 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~v--~-~~~~~~~--~~~D~v 238 (348)
T 3two_A 169 LKFSKVTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALS----MGVKHF--Y-TDPKQCK--EELDFI 238 (348)
T ss_dssp HHHTTCCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHH----TTCSEE--E-SSGGGCC--SCEEEE
T ss_pred HHhcCCCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHh----cCCCee--c-CCHHHHh--cCCCEE
Confidence 3456788999999999975 78888888876 7899999999987776643 454322 2 3332222 378998
Q ss_pred EEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 135 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 135 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+-...- ...+..+.+.|+|+|.+++.
T Consensus 239 id~~g~------~~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 239 ISTIPT------HYDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp EECCCS------CCCHHHHHTTEEEEEEEEEC
T ss_pred EECCCc------HHHHHHHHHHHhcCCEEEEE
Confidence 864332 12467788899999998774
No 308
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.83 E-value=0.00023 Score=61.74 Aligned_cols=72 Identities=13% Similarity=0.018 Sum_probs=53.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC
Q 022810 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF 125 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~ 125 (291)
.++..+++.. ..++..|||..||+|..+....+. +.+++|+|+++..++.+++++...+. ....++.|+.++
T Consensus 240 ~l~~~~i~~~-~~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~~r~~~~~~-~~~~~~~~~~~i 311 (323)
T 1boo_A 240 KLPEFFIRML-TEPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASAFRFLDNNI-SEEKITDIYNRI 311 (323)
T ss_dssp HHHHHHHHHH-CCTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHGGGSCSCS-CHHHHHHHHHHH
T ss_pred HHHHHHHHHh-CCCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHHHHHHhccc-chHHHHHHHHHH
Confidence 3445555443 467889999999999999998876 88999999999999999988765543 334444555443
No 309
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.82 E-value=0.017 Score=49.49 Aligned_cols=104 Identities=7% Similarity=0.018 Sum_probs=76.7
Q ss_pred CCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC---CCeEEEEccccCCcc---------C-CC
Q 022810 64 GHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL---QNVEIIVADISTFEM---------E-AS 130 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~---~~i~~~~~d~~~~~~---------~-~~ 130 (291)
...|++||||.=.....+.. .++.+++-|| .|..++..++.+.+.+. ++..++.+|+.+ .. . ..
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~ 179 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSA 179 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTS
T ss_pred CCeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCC
Confidence 35799999997766444431 1247899999 59999988888876432 368889999986 21 1 23
Q ss_pred ccEEEEcccccccc--cHHHHHHHHHhccccCeeEEEEeecc
Q 022810 131 YDRIYSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 131 ~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
.-++++-.++++++ +...+++.+.+.+.||+.+++.....
T Consensus 180 Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 180 RTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp CEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred CEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 45788888999984 45679999999889999998876543
No 310
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.82 E-value=0.0073 Score=53.33 Aligned_cols=72 Identities=17% Similarity=0.112 Sum_probs=56.1
Q ss_pred CEEEEEcCCcchHHHHHHHHCCCCE-EEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---------CCCccEE
Q 022810 65 HTVLDVGCGWGSLSLYIAQKYSNCK-ITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------EASYDRI 134 (291)
Q Consensus 65 ~~vLDiGcG~G~~~~~l~~~~p~~~-v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~---------~~~~D~v 134 (291)
.+++|+.||.|.++..+.+. |.+ +.++|+++.+++..+.|. ++..++++|+.++.. ...+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 58999999999999999887 665 669999999877776653 256778899987632 2579999
Q ss_pred EEccccccc
Q 022810 135 YSIEMFEHM 143 (291)
Q Consensus 135 ~~~~~l~~~ 143 (291)
+..++-+.+
T Consensus 76 ~ggpPCQ~f 84 (376)
T 3g7u_A 76 IGGPPCQGF 84 (376)
T ss_dssp EECCCCCTT
T ss_pred EecCCCCCc
Confidence 998764433
No 311
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.79 E-value=0.0068 Score=53.28 Aligned_cols=99 Identities=12% Similarity=0.075 Sum_probs=67.4
Q ss_pred HHHHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------
Q 022810 55 YCERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ 126 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~------ 126 (291)
+.+...++++.+||-+|+|. |..+..+++.. ++ +|+++|.+++.++.+++ .|.+. ++..+-.++.
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~~Vi~~~~~~~~~~~a~~----lGa~~--vi~~~~~~~~~~~~~~ 254 (371)
T 1f8f_A 182 CINALKVTPASSFVTWGAGAVGLSALLAAKVC-GASIIIAVDIVESRLELAKQ----LGATH--VINSKTQDPVAAIKEI 254 (371)
T ss_dssp HHTTTCCCTTCEEEEESCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHH----HTCSE--EEETTTSCHHHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHH----cCCCE--EecCCccCHHHHHHHh
Confidence 33556778999999999985 88888888776 66 79999999997777653 34421 2221111110
Q ss_pred cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 127 MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 127 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
..+.+|+|+-.... ...++.+.+.|+|+|++++.
T Consensus 255 ~~gg~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 255 TDGGVNFALESTGS------PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp TTSCEEEEEECSCC------HHHHHHHHHTEEEEEEEEEC
T ss_pred cCCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEe
Confidence 01368988864321 35678889999999998764
No 312
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.79 E-value=0.006 Score=54.26 Aligned_cols=102 Identities=13% Similarity=0.039 Sum_probs=68.1
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC-c------c
Q 022810 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-E------M 127 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~-~------~ 127 (291)
+...++++.+||-+|||. |..+..+++.. ++ +|+++|.+++.++.++ +.|. .++..+-.+. . .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa---~~i~~~~~~~~~~~~~~~~ 250 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLL-GAACVIVGDQNPERLKLLS----DAGF---ETIDLRNSAPLRDQIDQIL 250 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHH----TTTC---EEEETTSSSCHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHH----HcCC---cEEcCCCcchHHHHHHHHh
Confidence 556788999999999986 88888888876 67 9999999998776654 3443 2332211111 1 0
Q ss_pred C-CCccEEEEccccccc--------ccHHHHHHHHHhccccCeeEEEE
Q 022810 128 E-ASYDRIYSIEMFEHM--------KNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 ~-~~~D~v~~~~~l~~~--------~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
. ..+|+|+-...-... ......++.+.+.|+++|++++.
T Consensus 251 ~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 251 GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 1 369999865432210 01234688888999999998764
No 313
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.77 E-value=0.011 Score=52.43 Aligned_cols=102 Identities=14% Similarity=0.082 Sum_probs=69.3
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC-Cc------c
Q 022810 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FE------M 127 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~-~~------~ 127 (291)
....++++.+||-+|+|. |..+..+++.. ++ +|+++|.+++.++.+++ .|. ..+...-.+ +. .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~-Ga~~Vi~~~~~~~~~~~a~~----lGa---~~i~~~~~~~~~~~v~~~t 250 (398)
T 1kol_A 179 VTAGVGPGSTVYVAGAGPVGLAAAASARLL-GAAVVIVGDLNPARLAHAKA----QGF---EIADLSLDTPLHEQIAALL 250 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHH----TTC---EEEETTSSSCHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCcHHHHHHHHHHHHC-CCCeEEEEcCCHHHHHHHHH----cCC---cEEccCCcchHHHHHHHHh
Confidence 456788999999999875 88888888876 66 79999999987776643 454 222211111 10 1
Q ss_pred C-CCccEEEEccccc---------ccccHHHHHHHHHhccccCeeEEEE
Q 022810 128 E-ASYDRIYSIEMFE---------HMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 ~-~~~D~v~~~~~l~---------~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
. ..+|+|+-...-. +.++....++.+.++|+++|.+++.
T Consensus 251 ~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 251 GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 1 3689998654321 2233455788899999999998764
No 314
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.76 E-value=0.0036 Score=54.20 Aligned_cols=71 Identities=15% Similarity=0.102 Sum_probs=55.0
Q ss_pred CCEEEEEcCCcchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC--CCccEEEEcccc
Q 022810 64 GHTVLDVGCGWGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME--ASYDRIYSIEMF 140 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~--~~~D~v~~~~~l 140 (291)
+.+++|+.||.|.++..+.+. |. .+.++|+++.+++..+.+.... . ++|+.++... ..+|+|+..++.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~~~----~---~~Di~~~~~~~~~~~D~l~~gpPC 81 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFGEK----P---EGDITQVNEKTIPDHDILCAGFPC 81 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHSCC----C---BSCGGGSCGGGSCCCSEEEEECCC
T ss_pred CCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCC----C---cCCHHHcCHhhCCCCCEEEECCCC
Confidence 579999999999999999876 55 4778999999988888776321 1 6888876533 569999998765
Q ss_pred ccc
Q 022810 141 EHM 143 (291)
Q Consensus 141 ~~~ 143 (291)
+.+
T Consensus 82 Q~f 84 (327)
T 2c7p_A 82 QAF 84 (327)
T ss_dssp TTT
T ss_pred CCc
Confidence 444
No 315
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.75 E-value=0.0057 Score=53.52 Aligned_cols=97 Identities=14% Similarity=0.118 Sum_probs=66.3
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcc---ccCC----c-
Q 022810 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVAD---ISTF----E- 126 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d---~~~~----~- 126 (291)
+...+.++.+||-+|+|. |..+..+++.. ++ +|+++|.+++.++.++ +.|.+. ++..+ -.+. .
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~--vi~~~~~~~~~~~~~i~~ 237 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAK----EIGADL--VLQISKESPQEIARKVEG 237 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHH----HTTCSE--EEECSSCCHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHH----HhCCCE--EEcCcccccchHHHHHHH
Confidence 556788999999999985 88888888876 77 9999999998766654 345432 22211 0111 0
Q ss_pred -cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 127 -MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 127 -~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
....+|+|+-.... ...+....+.|+|+|++++.
T Consensus 238 ~~~~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 238 QLGCKPEVTIECTGA------EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HHTSCCSEEEECSCC------HHHHHHHHHHSCTTCEEEEC
T ss_pred HhCCCCCEEEECCCC------hHHHHHHHHHhcCCCEEEEE
Confidence 01468998865321 34677888999999998764
No 316
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.70 E-value=0.013 Score=50.87 Aligned_cols=98 Identities=8% Similarity=0.093 Sum_probs=67.6
Q ss_pred HHHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-----CC
Q 022810 56 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----EA 129 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~-----~~ 129 (291)
++...+.++.+||-+|+|. |..+..+++.. +++|+++|.+++.++.+++ .|.+. ++..+-.+... .+
T Consensus 159 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~--~i~~~~~~~~~~~~~~~g 231 (340)
T 3s2e_A 159 LKVTDTRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARR----LGAEV--AVNARDTDPAAWLQKEIG 231 (340)
T ss_dssp HHTTTCCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----TTCSE--EEETTTSCHHHHHHHHHS
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHH----cCCCE--EEeCCCcCHHHHHHHhCC
Confidence 3556778999999999984 88888998876 8899999999997776643 45421 22211111110 13
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 130 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
.+|+|+.... ....++.+.+.|+|+|.+++.
T Consensus 232 ~~d~vid~~g------~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 232 GAHGVLVTAV------SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp SEEEEEESSC------CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEEeCC------CHHHHHHHHHHhccCCEEEEe
Confidence 6888876432 245678888999999998764
No 317
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.61 E-value=0.0024 Score=55.78 Aligned_cols=72 Identities=15% Similarity=0.197 Sum_probs=55.3
Q ss_pred CCEEEEEcCCcchHHHHHHHHCCC---CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC----CCccEEEE
Q 022810 64 GHTVLDVGCGWGSLSLYIAQKYSN---CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----ASYDRIYS 136 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~l~~~~p~---~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~----~~~D~v~~ 136 (291)
..+|+|+.||.|.++..+.+. | ..|.++|+++.+++..+.|+. +..++.+|+.++... ..+|+|+.
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~--G~~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~~~~~~~~D~l~~ 74 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRES--CIPAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLEEFDRLSFDMILM 74 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHH--TCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHHHHHHHCCSEEEE
T ss_pred CCeEEEeCcCccHHHHHHHHC--CCCceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHhHcCcCCcCEEEE
Confidence 358999999999999999887 5 258999999998888877653 345678999886532 26999999
Q ss_pred cccccc
Q 022810 137 IEMFEH 142 (291)
Q Consensus 137 ~~~l~~ 142 (291)
.++-+.
T Consensus 75 gpPCq~ 80 (343)
T 1g55_A 75 SPPCQP 80 (343)
T ss_dssp CCC---
T ss_pred cCCCcc
Confidence 887433
No 318
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.52 E-value=0.01 Score=52.03 Aligned_cols=101 Identities=15% Similarity=0.036 Sum_probs=68.8
Q ss_pred HHHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCCE-EEEEcCCHHHHHHHHHHHHHhCCCCeEEEE-----ccccC----
Q 022810 56 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCK-ITGICNSKTQKEFIEEQCRVLELQNVEIIV-----ADIST---- 124 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~~-v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~-----~d~~~---- 124 (291)
++...++++.+||-+|+|. |..+..+++.. +++ |+++|.+++.++.+++. .. .-+.+.. .|+.+
T Consensus 172 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-~~---~~~~~~~~~~~~~~~~~~v~~ 246 (363)
T 3m6i_A 172 LQRAGVRLGDPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEI-CP---EVVTHKVERLSAEESAKKIVE 246 (363)
T ss_dssp HHHHTCCTTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHH-CT---TCEEEECCSCCHHHHHHHHHH
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-ch---hcccccccccchHHHHHHHHH
Confidence 3566788999999999974 78888888876 776 99999999988888764 11 1122221 11111
Q ss_pred CccCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 125 FEMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 125 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
......+|+|+-... ....+..+.+.|+++|.+++..
T Consensus 247 ~t~g~g~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 247 SFGGIEPAVALECTG------VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp HTSSCCCSEEEECSC------CHHHHHHHHHHSCTTCEEEECC
T ss_pred HhCCCCCCEEEECCC------ChHHHHHHHHHhcCCCEEEEEc
Confidence 011246999886432 1346788889999999987743
No 319
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.51 E-value=0.024 Score=49.76 Aligned_cols=97 Identities=16% Similarity=0.221 Sum_probs=67.0
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEE---ccccC-C-----
Q 022810 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIV---ADIST-F----- 125 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~---~d~~~-~----- 125 (291)
+...++++.+||-+|+|. |..+..+++.. ++ +|+++|.+++..+.+++ .|.+. ++. .|+.+ .
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~----lGa~~--vi~~~~~~~~~~i~~~~~ 248 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLA-GATTVILSTRQATKRRLAEE----VGATA--TVDPSAGDVVEAIAGPVG 248 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHHH----HTCSE--EECTTSSCHHHHHHSTTS
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH----cCCCE--EECCCCcCHHHHHHhhhh
Confidence 566788999999999974 78888888876 66 89999999987766654 45421 111 11111 0
Q ss_pred ccCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 126 EMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 126 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
...+.+|+|+-... ....++.+.+.|++||.+++.
T Consensus 249 ~~~gg~Dvvid~~G------~~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 249 LVPGGVDVVIECAG------VAETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp SSTTCEEEEEECSC------CHHHHHHHHHHEEEEEEEEEC
T ss_pred ccCCCCCEEEECCC------CHHHHHHHHHHhccCCEEEEE
Confidence 01146899886432 145678888999999998774
No 320
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.48 E-value=0.016 Score=50.47 Aligned_cols=97 Identities=18% Similarity=0.140 Sum_probs=66.1
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcc-ccCCc-------c
Q 022810 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVAD-ISTFE-------M 127 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d-~~~~~-------~ 127 (291)
+...++++.+||-+|+|. |..+..+++.. +++|+++|.+++.++.++ +.|.+. ++..+ -.+.. .
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~----~lGa~~--~~~~~~~~~~~~~i~~~~~ 234 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAK----NCGADV--TLVVDPAKEEESSIIERIR 234 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHH----HTTCSE--EEECCTTTSCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHH----HhCCCE--EEcCcccccHHHHHHHHhc
Confidence 556788999999999874 77888888776 788999999998776664 345431 22211 01110 0
Q ss_pred ---CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 128 ---EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 ---~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
...+|+|+-.... ...++.+.+.|+|+|.+++.
T Consensus 235 ~~~g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 235 SAIGDLPNVTIDCSGN------EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHSSSCCSEEEECSCC------HHHHHHHHHHSCTTCEEEEC
T ss_pred cccCCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEE
Confidence 2358998865322 34577888999999998764
No 321
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.44 E-value=0.0057 Score=52.74 Aligned_cols=60 Identities=17% Similarity=-0.011 Sum_probs=47.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCH---HHHHHHHHHHHHhC
Q 022810 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSK---TQKEFIEEQCRVLE 111 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~---~~~~~a~~~~~~~~ 111 (291)
..++..++... ..++..|||.-||+|..+....+. +.+.+|+|+++ ..++.+++++...+
T Consensus 229 ~~l~~~~i~~~-~~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 229 AAVIERLVRAL-SHPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHH-SCTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHh-CCCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 34555666544 367889999999999999999988 88999999999 99999988876554
No 322
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.42 E-value=0.0073 Score=53.15 Aligned_cols=98 Identities=16% Similarity=0.215 Sum_probs=65.4
Q ss_pred HHHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC-c-cCCCcc
Q 022810 56 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-E-MEASYD 132 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~-~-~~~~~D 132 (291)
+....++++.+||-+|+|. |..+..+++.. +++|++++.+++.++.+++ .|.+. ++...-.+. . ....+|
T Consensus 187 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~----lGa~~--vi~~~~~~~~~~~~~g~D 259 (369)
T 1uuf_A 187 LRHWQAGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKA----LGADE--VVNSRNADEMAAHLKSFD 259 (369)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH----HTCSE--EEETTCHHHHHTTTTCEE
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCcE--EeccccHHHHHHhhcCCC
Confidence 3445788999999999984 77888888776 8899999999988777654 34422 221110010 0 014689
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 133 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+|+-...- ...++.+.+.|+|+|.++..
T Consensus 260 vvid~~g~------~~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 260 FILNTVAA------PHNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp EEEECCSS------CCCHHHHHTTEEEEEEEEEC
T ss_pred EEEECCCC------HHHHHHHHHHhccCCEEEEe
Confidence 98865332 12356778899999997763
No 323
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.25 E-value=0.024 Score=49.15 Aligned_cols=100 Identities=12% Similarity=0.039 Sum_probs=65.0
Q ss_pred HHHHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------c
Q 022810 55 YCERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------M 127 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~------~ 127 (291)
........++.+||-.|+|. |..+..+++......++++|.+++.++.++ +.|.+ ..+...-.+.. .
T Consensus 152 ~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~----~lGa~--~~i~~~~~~~~~~~~~~~ 225 (346)
T 4a2c_A 152 AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAK----SFGAM--QTFNSSEMSAPQMQSVLR 225 (346)
T ss_dssp HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCS--EEEETTTSCHHHHHHHHG
T ss_pred HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHH----HcCCe--EEEeCCCCCHHHHHHhhc
Confidence 44566778999999999974 567777777763346789999998766654 34542 22221111110 1
Q ss_pred C-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 128 E-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 ~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
. ..+|+|+.... ....++...++|+++|.+++.
T Consensus 226 ~~~g~d~v~d~~G------~~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 226 ELRFNQLILETAG------VPQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp GGCSSEEEEECSC------SHHHHHHHHHHCCTTCEEEEC
T ss_pred ccCCccccccccc------ccchhhhhhheecCCeEEEEE
Confidence 1 45787765432 245678888999999998774
No 324
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.25 E-value=0.022 Score=49.08 Aligned_cols=71 Identities=18% Similarity=0.174 Sum_probs=54.6
Q ss_pred CEEEEEcCCcchHHHHHHHHCCCCE-EEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC--CCccEEEEccccc
Q 022810 65 HTVLDVGCGWGSLSLYIAQKYSNCK-ITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME--ASYDRIYSIEMFE 141 (291)
Q Consensus 65 ~~vLDiGcG~G~~~~~l~~~~p~~~-v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~--~~~D~v~~~~~l~ 141 (291)
++|+|+-||.|.++.-+.+. |.+ +.++|+++.+++..+.+. .-.++.+|+.++... ...|+++..++-+
T Consensus 1 mkvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~------~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ 72 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNH------SAKLIKGDISKISSDEFPKCDGIIGGPPSQ 72 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHC------CSEEEESCGGGCCGGGSCCCSEEECCCCGG
T ss_pred CeEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHC------CCCcccCChhhCCHhhCCcccEEEecCCCC
Confidence 47999999999999998876 565 569999999877766653 235788999887544 6789999877544
Q ss_pred cc
Q 022810 142 HM 143 (291)
Q Consensus 142 ~~ 143 (291)
.+
T Consensus 73 ~f 74 (331)
T 3ubt_Y 73 SW 74 (331)
T ss_dssp GT
T ss_pred Cc
Confidence 33
No 325
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.22 E-value=0.015 Score=49.58 Aligned_cols=129 Identities=16% Similarity=0.195 Sum_probs=71.4
Q ss_pred ccCCCCCCHHHHHHHHHHH--HHHHcCCCCCCEEEEEcCCcchHHHHHH----HHCCCCE--EEEEcCCH--------H-
Q 022810 36 YFSDASKTLEDAEKAMLEL--YCERSRLEDGHTVLDVGCGWGSLSLYIA----QKYSNCK--ITGICNSK--------T- 98 (291)
Q Consensus 36 ~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~vLDiGcG~G~~~~~l~----~~~p~~~--v~~vD~s~--------~- 98 (291)
|++.....+.++....+.- +.++....+.-+|||+|-|+|.+..... +..|..+ ++.+|..+ .
T Consensus 67 YhS~~~GAl~Es~hVFi~~~~L~~r~~~~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~ 146 (308)
T 3vyw_A 67 YHSQTAGAIRESLYKFVRPSRILEKAKERKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEP 146 (308)
T ss_dssp SSCTTTCHHHHHHHHTHHHHTHHHHHHHCSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTT
T ss_pred cCCCCCcHHHHHHHHHhccCCchHHhcCCCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHh
Confidence 3443333455555443321 2222222345689999999998764432 2345554 56666421 1
Q ss_pred HHHHHHHHHHHhC---CC--CeEEEEccccCCcc--C-CCccEEEEcccccccccH----HHHHHHHHhccccCeeEEE
Q 022810 99 QKEFIEEQCRVLE---LQ--NVEIIVADISTFEM--E-ASYDRIYSIEMFEHMKNY----QNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 99 ~~~~a~~~~~~~~---~~--~i~~~~~d~~~~~~--~-~~~D~v~~~~~l~~~~~~----~~~l~~~~~~L~pgG~l~i 165 (291)
.-+.......... .. .+++..+|+.+... . .++|+|+..+ +.--.++ ..+++.+.++++|||++.-
T Consensus 147 ~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 147 YREIHEFLLERVPEYEGERLSLKVLLGDARKRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp SHHHHHHHHHHCSEEECSSEEEEEEESCHHHHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHhCccccCCcEEEEEEechHHHHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEE
Confidence 1111222222211 12 35678899876432 2 4799999865 2222222 6799999999999998764
No 326
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.21 E-value=0.012 Score=51.29 Aligned_cols=99 Identities=17% Similarity=0.114 Sum_probs=67.2
Q ss_pred HHHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-------
Q 022810 56 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------- 126 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~------- 126 (291)
++...++++.+||-+|+|. |..+..+++.. ++ +|+++|.+++.++.+++ .|.+ .++..+-.++.
T Consensus 159 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~----lGa~--~vi~~~~~~~~~~v~~~t 231 (352)
T 3fpc_A 159 AELANIKLGDTVCVIGIGPVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALE----YGAT--DIINYKNGDIVEQILKAT 231 (352)
T ss_dssp HHHTTCCTTCCEEEECCSHHHHHHHHHHHTT-TCSSEEEECCCHHHHHHHHH----HTCC--EEECGGGSCHHHHHHHHT
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHH----hCCc--eEEcCCCcCHHHHHHHHc
Confidence 3667788999999999984 77888888765 66 89999999987766654 4442 12221111111
Q ss_pred cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 127 MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 127 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
....+|+|+-...- ...+..+.+.|+|+|.++...
T Consensus 232 ~g~g~D~v~d~~g~------~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 232 DGKGVDKVVIAGGD------VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TTCCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEec
Confidence 11369999864321 246778888999999987753
No 327
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.20 E-value=0.021 Score=45.15 Aligned_cols=94 Identities=17% Similarity=0.211 Sum_probs=61.7
Q ss_pred HHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--------
Q 022810 57 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------- 126 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~-------- 126 (291)
+...+.++.+||..|+ |.|..+..+++.. +.+|+++|.+++..+.++ +.+.+ . .+ |..+..
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~----~~g~~-~-~~--d~~~~~~~~~~~~~ 102 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLS----RLGVE-Y-VG--DSRSVDFADEILEL 102 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHH----TTCCS-E-EE--ETTCSTHHHHHHHH
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH----HcCCC-E-Ee--eCCcHHHHHHHHHH
Confidence 3456788999999994 4566666666554 789999999988665543 23432 1 11 322211
Q ss_pred c-CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 127 M-EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 127 ~-~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
. ...+|+|+.+.. ...++.+.+.|+|+|++++.
T Consensus 103 ~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 103 TDGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp TTTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEEC
T ss_pred hCCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEE
Confidence 1 135899986542 24678888999999998764
No 328
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.17 E-value=0.015 Score=51.10 Aligned_cols=95 Identities=9% Similarity=0.080 Sum_probs=65.6
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC----Cc----
Q 022810 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST----FE---- 126 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~----~~---- 126 (291)
+...+.++.+||-+|+|. |..+..+++.. ++ +|+++|.+++.++.+++ .|.+. ++ |..+ +.
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~----lGa~~--vi--~~~~~~~~~~~~~~ 256 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKV----FGATD--FV--NPNDHSEPISQVLS 256 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHH----TTCCE--EE--CGGGCSSCHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHH----hCCce--EE--eccccchhHHHHHH
Confidence 456778899999999874 77888888876 76 89999999987776653 44421 12 2211 11
Q ss_pred --cCCCccEEEEcccccccccHHHHHHHHHhccccC-eeEEEE
Q 022810 127 --MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVH 166 (291)
Q Consensus 127 --~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~ 166 (291)
..+.+|+|+-.... ...+..+.+.|+++ |.+++.
T Consensus 257 ~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 257 KMTNGGVDFSLECVGN------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp HHHTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHhCCCCCEEEECCCC------HHHHHHHHHHhhcCCcEEEEE
Confidence 01368998864321 35678889999999 998764
No 329
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.12 E-value=0.013 Score=50.84 Aligned_cols=95 Identities=13% Similarity=0.148 Sum_probs=65.8
Q ss_pred CCCCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-------cCCCc
Q 022810 60 RLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------MEASY 131 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~-------~~~~~ 131 (291)
.+.++.+||-+|+|. |..+..+++...+.+|+++|.+++.++.+++ .|.+. ++..+- +.. ....+
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~~--~i~~~~-~~~~~v~~~t~g~g~ 240 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGADA--AVKSGA-GAADAIRELTGGQGA 240 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCSE--EEECST-THHHHHHHHHGGGCE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCCE--EEcCCC-cHHHHHHHHhCCCCC
Confidence 567899999999975 7888888877546899999999997776643 45432 221111 111 11368
Q ss_pred cEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 132 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 132 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
|+|+-.-.- ...++.+.+.|+++|.+++..
T Consensus 241 d~v~d~~G~------~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 241 TAVFDFVGA------QSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEEESSCC------HHHHHHHHHHEEEEEEEEECS
T ss_pred eEEEECCCC------HHHHHHHHHHHhcCCEEEEEC
Confidence 988864321 347888899999999987753
No 330
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.11 E-value=0.014 Score=51.34 Aligned_cols=98 Identities=11% Similarity=0.036 Sum_probs=65.9
Q ss_pred HHHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcc-c-cCCc-----
Q 022810 56 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVAD-I-STFE----- 126 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d-~-~~~~----- 126 (291)
.+...+.++.+||-+|+|. |..+..+++.. ++ +|+++|.+++.++.++ +.|.+. ++..+ . .++.
T Consensus 184 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~--vi~~~~~~~~~~~~i~~ 256 (373)
T 1p0f_A 184 VNTAKVTPGSTCAVFGLGGVGFSAIVGCKAA-GASRIIGVGTHKDKFPKAI----ELGATE--CLNPKDYDKPIYEVICE 256 (373)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHH----HTTCSE--EECGGGCSSCHHHHHHH
T ss_pred HhccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHH----HcCCcE--EEecccccchHHHHHHH
Confidence 3456778999999999874 77888888776 66 8999999998777665 345421 22111 0 1110
Q ss_pred -cCCCccEEEEcccccccccHHHHHHHHHhccccC-eeEEEE
Q 022810 127 -MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVH 166 (291)
Q Consensus 127 -~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~ 166 (291)
..+.+|+|+-...- ...+..+.+.|+++ |.+++.
T Consensus 257 ~t~gg~Dvvid~~g~------~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 257 KTNGGVDYAVECAGR------IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp HTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HhCCCCCEEEECCCC------HHHHHHHHHHHhcCCCEEEEE
Confidence 01368998864321 35678888999999 998764
No 331
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=96.09 E-value=0.021 Score=48.90 Aligned_cols=92 Identities=13% Similarity=0.142 Sum_probs=62.2
Q ss_pred HHcCCCCCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEE
Q 022810 57 ERSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIY 135 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~ 135 (291)
+...++++.+||-+|+| .|..+..+++.. +++|++++ +++..+.+++ .|.+ .++ .|...+ ...+|+|+
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~----lGa~--~v~-~d~~~v--~~g~Dvv~ 204 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAK----RGVR--HLY-REPSQV--TQKYFAIF 204 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHH----HTEE--EEE-SSGGGC--CSCEEEEE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHH----cCCC--EEE-cCHHHh--CCCccEEE
Confidence 56677899999999997 478888888876 78999999 8887776654 4432 122 242222 46789888
Q ss_pred EcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 136 SIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 136 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
-...- ..+..+.+.|+|+|.++..
T Consensus 205 d~~g~-------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 205 DAVNS-------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp CC--------------TTGGGEEEEEEEEEE
T ss_pred ECCCc-------hhHHHHHHHhcCCCEEEEE
Confidence 54221 1235677899999998775
No 332
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.07 E-value=0.018 Score=50.64 Aligned_cols=98 Identities=12% Similarity=0.057 Sum_probs=65.9
Q ss_pred HHHcCCCCCCEEEEEcCC-cchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEc-cc-cCCc-----
Q 022810 56 CERSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVA-DI-STFE----- 126 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG-~G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~-d~-~~~~----- 126 (291)
.+...+.++.+||-+|+| .|..+..+++.. ++ +|+++|.+++.++.++ +.|.+. ++.. +. .++.
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~--vi~~~~~~~~~~~~v~~ 260 (376)
T 1e3i_A 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAK----ALGATD--CLNPRELDKPVQDVITE 260 (376)
T ss_dssp HTTSCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHH----HTTCSE--EECGGGCSSCHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHH----HhCCcE--EEccccccchHHHHHHH
Confidence 345677889999999987 477888888876 77 8999999998776664 345421 1211 10 1110
Q ss_pred -cCCCccEEEEcccccccccHHHHHHHHHhccccC-eeEEEE
Q 022810 127 -MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVH 166 (291)
Q Consensus 127 -~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~ 166 (291)
..+.+|+|+-...- ...++.+.+.|+++ |.+++.
T Consensus 261 ~~~~g~Dvvid~~G~------~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 261 LTAGGVDYSLDCAGT------AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp HHTSCBSEEEESSCC------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HhCCCccEEEECCCC------HHHHHHHHHHhhcCCCEEEEE
Confidence 01368988864321 35678889999999 998764
No 333
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.06 E-value=0.031 Score=48.21 Aligned_cols=94 Identities=21% Similarity=0.288 Sum_probs=63.6
Q ss_pred HHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC---Cc-----
Q 022810 57 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST---FE----- 126 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~---~~----- 126 (291)
+...+.++.+||-.|| |.|..+..+++.. +++|+++|.+++.++.++ +.+.+ .. .|..+ ..
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~----~~g~~-~~---~d~~~~~~~~~~~~~ 209 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLK----QIGFD-AA---FNYKTVNSLEEALKK 209 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH----HTTCS-EE---EETTSCSCHHHHHHH
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH----hcCCc-EE---EecCCHHHHHHHHHH
Confidence 4557788999999998 5677777777665 789999999988766653 23432 11 23322 10
Q ss_pred -cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 127 -MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 127 -~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
..+.+|+++.+..- ..+..+.+.|+++|.+++.
T Consensus 210 ~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 210 ASPDGYDCYFDNVGG-------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp HCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEEC
T ss_pred HhCCCCeEEEECCCh-------HHHHHHHHHHhcCCEEEEE
Confidence 01368998876432 3477888999999998764
No 334
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.97 E-value=0.017 Score=50.68 Aligned_cols=97 Identities=14% Similarity=0.154 Sum_probs=65.4
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEc-cc-cCCc------
Q 022810 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVA-DI-STFE------ 126 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~-d~-~~~~------ 126 (291)
+...++++.+||-+|+|. |..+..+++.. ++ +|+++|.+++.++.+++ .|.+. ++.. +. .++.
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~-Ga~~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~~~v~~~ 256 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKE----FGATE--CINPQDFSKPIQEVLIEM 256 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHH----HTCSE--EECGGGCSSCHHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHH----cCCce--EeccccccccHHHHHHHH
Confidence 456778899999999874 77788888776 66 89999999998777653 35421 1211 10 1110
Q ss_pred cCCCccEEEEcccccccccHHHHHHHHHhccccC-eeEEEE
Q 022810 127 MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVH 166 (291)
Q Consensus 127 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~ 166 (291)
..+.+|+|+-.... ...++.+.+.|+++ |.+++.
T Consensus 257 ~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 257 TDGGVDYSFECIGN------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp TTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEEC
T ss_pred hCCCCCEEEECCCc------HHHHHHHHHhhccCCcEEEEE
Confidence 01368998865321 35678888999999 998764
No 335
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.94 E-value=0.021 Score=50.19 Aligned_cols=97 Identities=10% Similarity=0.086 Sum_probs=65.2
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccc--cCCc------
Q 022810 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADI--STFE------ 126 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~--~~~~------ 126 (291)
+...+.++.+||-+|+|. |..+..+++.. ++ +|+++|.+++.++.++ +.|.+. ++..+- .++.
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~--vi~~~~~~~~~~~~~~~~ 257 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAK----EVGATE--CVNPQDYKKPIQEVLTEM 257 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHH----HTTCSE--EECGGGCSSCHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHH----HhCCce--EecccccchhHHHHHHHH
Confidence 456778999999999874 77888888876 76 8999999998777664 344421 121110 1110
Q ss_pred cCCCccEEEEcccccccccHHHHHHHHHhccccC-eeEEEE
Q 022810 127 MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVH 166 (291)
Q Consensus 127 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~ 166 (291)
..+.+|+|+-...- ...+..+.+.|+++ |.+++.
T Consensus 258 ~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 258 SNGGVDFSFEVIGR------LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp TTSCBSEEEECSCC------HHHHHHHHHHBCTTTCEEEEC
T ss_pred hCCCCcEEEECCCC------HHHHHHHHHHhhcCCcEEEEe
Confidence 01368988865321 35678888999999 998764
No 336
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.93 E-value=0.063 Score=46.44 Aligned_cols=95 Identities=11% Similarity=0.108 Sum_probs=65.1
Q ss_pred HHcCCCCCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-----C--
Q 022810 57 ERSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E-- 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~-----~-- 128 (291)
....+.++.+||-+|+| .|..+..+++.. +++|++++.+++.++.+++ .|.+. + .|..+... .
T Consensus 158 ~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~--~--~d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 158 KVTGAKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKE----LGADL--V--VNPLKEDAAKFMKEKV 228 (339)
T ss_dssp HHHTCCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH----TTCSE--E--ECTTTSCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----CCCCE--E--ecCCCccHHHHHHHHh
Confidence 34477889999999986 477778888776 7899999999987776643 44421 1 23221110 0
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
..+|+|+..... ...++.+.+.|+++|.++..
T Consensus 229 ~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 229 GGVHAAVVTAVS------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp SSEEEEEESSCC------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECCCC------HHHHHHHHHHhhcCCEEEEe
Confidence 368988865332 34678888999999998764
No 337
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.92 E-value=0.023 Score=49.32 Aligned_cols=94 Identities=15% Similarity=0.211 Sum_probs=63.0
Q ss_pred CCCCCCEEEEEcCCc-chHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEc----cc-cCCccCCCcc
Q 022810 60 RLEDGHTVLDVGCGW-GSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA----DI-STFEMEASYD 132 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~-G~~~~~l~~~~-p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~----d~-~~~~~~~~~D 132 (291)
.+ ++.+||-+|+|. |..+..+++.. |+++|++++.+++.++.+++ .|.+. ++.. |. ........+|
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~~~~~g~g~D 240 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGADY--VSEMKDAESLINKLTDGLGAS 240 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCSE--EECHHHHHHHHHHHHTTCCEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCCE--EeccccchHHHHHhhcCCCcc
Confidence 67 899999999974 67777777763 47899999999987776654 34422 1111 11 0111113699
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 133 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+|+-.... ...++.+.+.|+|+|.++..
T Consensus 241 ~vid~~g~------~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 241 IAIDLVGT------EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEESSCC------HHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCC------hHHHHHHHHHhhcCCEEEEe
Confidence 99865332 34678888999999998764
No 338
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.88 E-value=0.027 Score=47.93 Aligned_cols=72 Identities=11% Similarity=0.022 Sum_probs=54.8
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCE---EEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-----CCccE
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCK---ITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-----ASYDR 133 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~p~~~---v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-----~~~D~ 133 (291)
....+++|+-||.|.++..+.+. |.+ |.++|+++.+++..+.+. +...++.+|+.++... ..+|+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a--G~~~~~v~a~E~d~~a~~ty~~N~-----~~~~~~~~DI~~i~~~~i~~~~~~Dl 86 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL--GIQVDRYIASEVCEDSITVGMVRH-----QGKIMYVGDVRSVTQKHIQEWGPFDL 86 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT--TBCEEEEEEECCCHHHHHHHHHHT-----TTCEEEECCGGGCCHHHHHHTCCCSE
T ss_pred CCCCEEEEeCcCccHHHHHHHHC--CCccceEEEEECCHHHHHHHHHhC-----CCCceeCCChHHccHHHhcccCCcCE
Confidence 45679999999999999998876 554 589999999777666553 2346778999887532 36999
Q ss_pred EEEcccc
Q 022810 134 IYSIEMF 140 (291)
Q Consensus 134 v~~~~~l 140 (291)
++...+-
T Consensus 87 l~ggpPC 93 (295)
T 2qrv_A 87 VIGGSPC 93 (295)
T ss_dssp EEECCCC
T ss_pred EEecCCC
Confidence 9987644
No 339
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.87 E-value=0.022 Score=49.51 Aligned_cols=96 Identities=14% Similarity=0.221 Sum_probs=64.4
Q ss_pred HHHcCCC------CCCEEEEE-cCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-
Q 022810 56 CERSRLE------DGHTVLDV-GCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE- 126 (291)
Q Consensus 56 ~~~~~~~------~~~~vLDi-GcG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~- 126 (291)
.+...+. ++.+||-+ |+| .|..+..+++.. +++|++++.+++.++.+++ .|.+. ++..+ .++.
T Consensus 137 ~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~-~~~~~ 208 (346)
T 3fbg_A 137 FDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKK----MGADI--VLNHK-ESLLN 208 (346)
T ss_dssp HTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHH----HTCSE--EECTT-SCHHH
T ss_pred HHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCcE--EEECC-ccHHH
Confidence 3455666 89999999 454 577888888776 8899999999987777654 34421 11111 1110
Q ss_pred -----cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEE
Q 022810 127 -----MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 127 -----~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 165 (291)
....+|+|+-... ....+..+.++|+++|.++.
T Consensus 209 ~~~~~~~~g~Dvv~d~~g------~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 209 QFKTQGIELVDYVFCTFN------TDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp HHHHHTCCCEEEEEESSC------HHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHhCCCCccEEEECCC------chHHHHHHHHHhccCCEEEE
Confidence 1146898886422 34567888899999999865
No 340
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.87 E-value=0.016 Score=50.77 Aligned_cols=97 Identities=14% Similarity=0.267 Sum_probs=65.6
Q ss_pred HHcCCC-----CCCEEEEEc-CC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEc--cc----c
Q 022810 57 ERSRLE-----DGHTVLDVG-CG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA--DI----S 123 (291)
Q Consensus 57 ~~~~~~-----~~~~vLDiG-cG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~--d~----~ 123 (291)
+...+. ++.+||-+| +| .|..+..+++...+.+|++++.+++.++.+++ .|.+. ++.. |. .
T Consensus 160 ~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad~--vi~~~~~~~~~v~ 233 (363)
T 4dvj_A 160 DRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAHH--VIDHSKPLAAEVA 233 (363)
T ss_dssp TTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCSE--EECTTSCHHHHHH
T ss_pred HhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCCE--EEeCCCCHHHHHH
Confidence 445565 788999998 55 68888899886348899999999987766643 45422 1111 11 1
Q ss_pred CCccCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 124 TFEMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 124 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+. ..+.+|+|+-... ....+..+.++|+++|.+++.
T Consensus 234 ~~-~~~g~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 234 AL-GLGAPAFVFSTTH------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp TT-CSCCEEEEEECSC------HHHHHHHHHHHSCTTCEEEEC
T ss_pred Hh-cCCCceEEEECCC------chhhHHHHHHHhcCCCEEEEE
Confidence 11 1147898876422 345778888999999998764
No 341
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.77 E-value=0.031 Score=48.57 Aligned_cols=96 Identities=16% Similarity=0.299 Sum_probs=64.8
Q ss_pred HHHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcccc---CCcc---
Q 022810 56 CERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIS---TFEM--- 127 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~---~~~~--- 127 (291)
+....+.++.+||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++ .+.+ ..+ |.. +...
T Consensus 162 l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~----~g~~--~~~--d~~~~~~~~~~~~ 232 (347)
T 2hcy_A 162 LKSANLMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRS----IGGE--VFI--DFTKEKDIVGAVL 232 (347)
T ss_dssp HHTTTCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHH----TTCC--EEE--ETTTCSCHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHH----cCCc--eEE--ecCccHhHHHHHH
Confidence 34456788999999998 4677777777765 7899999998886655543 3432 111 332 1110
Q ss_pred ---CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 128 ---EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 ---~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
.+.+|+|+.+... ...++.+.+.|+++|.+++.
T Consensus 233 ~~~~~~~D~vi~~~g~------~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 233 KATDGGAHGVINVSVS------EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp HHHTSCEEEEEECSSC------HHHHHHHTTSEEEEEEEEEC
T ss_pred HHhCCCCCEEEECCCc------HHHHHHHHHHHhcCCEEEEE
Confidence 0268988876432 35678889999999998764
No 342
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.77 E-value=0.016 Score=51.07 Aligned_cols=100 Identities=12% Similarity=0.119 Sum_probs=67.0
Q ss_pred HHHHcCCCCCCEEEEEcCC-cchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcc--ccCCc----
Q 022810 55 YCERSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVAD--ISTFE---- 126 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG-~G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d--~~~~~---- 126 (291)
+.+...++++.+||-+|+| .|..+..+++.. ++ +|+++|.+++.++.++ +.|.+. ++... -.++.
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~--vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTA-GASRIIGIDIDSKKYETAK----KFGVNE--FVNPKDHDKPIQEVIV 257 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHH-TCSCEEEECSCTTHHHHHH----TTTCCE--EECGGGCSSCHHHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHH----HcCCcE--EEccccCchhHHHHHH
Confidence 3455677899999999997 478888888776 66 8999999998776654 345422 22111 01110
Q ss_pred --cCCCccEEEEcccccccccHHHHHHHHHhccccC-eeEEEEe
Q 022810 127 --MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVHH 167 (291)
Q Consensus 127 --~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~ 167 (291)
..+.+|+|+-... ....++.+.+.|++| |++++..
T Consensus 258 ~~~~gg~D~vid~~g------~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 258 DLTDGGVDYSFECIG------NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp HHTTSCBSEEEECSC------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred HhcCCCCCEEEECCC------CHHHHHHHHHHhhccCCEEEEEc
Confidence 1136899886432 245678889999997 9987743
No 343
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.74 E-value=0.028 Score=48.66 Aligned_cols=99 Identities=13% Similarity=0.135 Sum_probs=64.7
Q ss_pred HHHHcCCCCCCEEEEEcCC--cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------
Q 022810 55 YCERSRLEDGHTVLDVGCG--WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ 126 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG--~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~------ 126 (291)
+.+...++++.+||-+|+| .|..+..+++.. +++|++++.+++.++.+++ .|.+. .+...-.+..
T Consensus 136 ~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----lga~~--~~~~~~~~~~~~~~~~ 208 (340)
T 3gms_A 136 CTETLNLQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLR----LGAAY--VIDTSTAPLYETVMEL 208 (340)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHH----HTCSE--EEETTTSCHHHHHHHH
T ss_pred HHHhcccCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----CCCcE--EEeCCcccHHHHHHHH
Confidence 3455678899999999987 677888888765 8899999999987777654 34421 2221111111
Q ss_pred -cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 127 -MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 127 -~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
....+|+|+.+..- ... ....+.|+++|.+++..
T Consensus 209 ~~~~g~Dvvid~~g~------~~~-~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 209 TNGIGADAAIDSIGG------PDG-NELAFSLRPNGHFLTIG 243 (340)
T ss_dssp TTTSCEEEEEESSCH------HHH-HHHHHTEEEEEEEEECC
T ss_pred hCCCCCcEEEECCCC------hhH-HHHHHHhcCCCEEEEEe
Confidence 11469998875432 122 33447899999987743
No 344
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=95.73 E-value=0.085 Score=46.49 Aligned_cols=82 Identities=9% Similarity=0.104 Sum_probs=49.5
Q ss_pred HHcCCCCCCEEEEEcCCcchHHHHHHHHC-------CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCC
Q 022810 57 ERSRLEDGHTVLDVGCGWGSLSLYIAQKY-------SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEA 129 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-------p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~ 129 (291)
+.++.+.+..|+|+|.|.|.++..+.+.. ...+++.||+|+...+.=++.+.. .+++.|. .++.+++.
T Consensus 74 ~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~--~~~v~W~-~~l~~lp~-- 148 (387)
T 1zkd_A 74 KAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG--IRNIHWH-DSFEDVPE-- 148 (387)
T ss_dssp HHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT--CSSEEEE-SSGGGSCC--
T ss_pred HHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC--CCCeEEe-CChhhcCC--
Confidence 34555556689999999999988776531 235899999999866543333322 2256654 23333331
Q ss_pred CccEEEEccccccc
Q 022810 130 SYDRIYSIEMFEHM 143 (291)
Q Consensus 130 ~~D~v~~~~~l~~~ 143 (291)
..-+|++|..+..+
T Consensus 149 ~~~~viANE~fDAl 162 (387)
T 1zkd_A 149 GPAVILANEYFDVL 162 (387)
T ss_dssp SSEEEEEESSGGGS
T ss_pred CCeEEEeccccccC
Confidence 23455666555433
No 345
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.73 E-value=0.036 Score=48.49 Aligned_cols=97 Identities=20% Similarity=0.127 Sum_probs=66.5
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-------cC
Q 022810 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------ME 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~-------~~ 128 (291)
+...++++.+||-+|+|. |..+..+++.. +++|++++.+++.++.+++ .|.+. ++..+-.++. ..
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~v~~~~~g 255 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFA----LGADH--GINRLEEDWVERVYALTGD 255 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----HTCSE--EEETTTSCHHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHH----cCCCE--EEcCCcccHHHHHHHHhCC
Confidence 456778999999999884 77888888876 8899999999987776643 45422 2222211211 11
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
..+|+|+-... ...+..+.+.|+|+|.+++..
T Consensus 256 ~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 256 RGADHILEIAG-------GAGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp CCEEEEEEETT-------SSCHHHHHHHEEEEEEEEEEC
T ss_pred CCceEEEECCC-------hHHHHHHHHHhhcCCEEEEEe
Confidence 37999886543 124667778899999987754
No 346
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.68 E-value=0.045 Score=47.36 Aligned_cols=98 Identities=16% Similarity=0.181 Sum_probs=64.7
Q ss_pred HHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------cC
Q 022810 57 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ME 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~------~~ 128 (291)
+...+.++.+||-.|+ |.|..+..+++.. +++|++++.+++.++.+++ +.|.+ ..+-..+..++. ..
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~---~~g~~-~~~d~~~~~~~~~~~~~~~~ 223 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKT---KFGFD-DAFNYKEESDLTAALKRCFP 223 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH---TSCCS-EEEETTSCSCSHHHHHHHCT
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH---HcCCc-eEEecCCHHHHHHHHHHHhC
Confidence 4567788999999997 4677788887765 7899999999887666542 23432 111111111111 01
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
..+|+|+.+... ..+..+.+.|+++|.+++.
T Consensus 224 ~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 224 NGIDIYFENVGG-------KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp TCEEEEEESSCH-------HHHHHHHTTEEEEEEEEEC
T ss_pred CCCcEEEECCCH-------HHHHHHHHHHhcCCEEEEE
Confidence 368988875431 3678888999999998764
No 347
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.60 E-value=0.015 Score=50.29 Aligned_cols=101 Identities=16% Similarity=0.204 Sum_probs=67.1
Q ss_pred HHHHHHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc----
Q 022810 53 ELYCERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE---- 126 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~---- 126 (291)
..+.+...++++.+||-.|+ |.|..+..+++.. +++|++++.+++.++.+. ++.|.+ ..+...-.+..
T Consensus 139 ~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~---~~~g~~--~~~~~~~~~~~~~~~ 212 (336)
T 4b7c_A 139 FALLDVGQPKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLV---EELGFD--GAIDYKNEDLAAGLK 212 (336)
T ss_dssp HHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH---HTTCCS--EEEETTTSCHHHHHH
T ss_pred HHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH---HHcCCC--EEEECCCHHHHHHHH
Confidence 33445667889999999998 4677888888776 889999999998666552 233432 11211111111
Q ss_pred --cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 127 --MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 127 --~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
..+.+|+|+.+..- ..+..+.+.|+++|.+++.
T Consensus 213 ~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 213 RECPKGIDVFFDNVGG-------EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp HHCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEEC
T ss_pred HhcCCCceEEEECCCc-------chHHHHHHHHhhCCEEEEE
Confidence 01468988875331 3678888999999998764
No 348
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.53 E-value=0.051 Score=47.14 Aligned_cols=98 Identities=18% Similarity=0.220 Sum_probs=64.3
Q ss_pred HHcCCCCCCEEEEEcCC--cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC----c--cC
Q 022810 57 ERSRLEDGHTVLDVGCG--WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF----E--ME 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG--~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~----~--~~ 128 (291)
....+.++.+||-.|+| .|..+..+++...+++|+++|.+++.++.+++ .+.+ ..+...+ .+. . ..
T Consensus 164 ~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~----~g~~-~~~~~~~-~~~~~~~~~~~~ 237 (347)
T 1jvb_A 164 RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----AGAD-YVINASM-QDPLAEIRRITE 237 (347)
T ss_dssp HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----HTCS-EEEETTT-SCHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCC-EEecCCC-ccHHHHHHHHhc
Confidence 45677899999999997 55666666665436899999999987776643 3432 1111111 111 0 11
Q ss_pred -CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 129 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 -~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+.+|+|+.+..- ...++.+.+.|+|+|.+++.
T Consensus 238 ~~~~d~vi~~~g~------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 238 SKGVDAVIDLNNS------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp TSCEEEEEESCCC------HHHHTTGGGGEEEEEEEEEC
T ss_pred CCCceEEEECCCC------HHHHHHHHHHHhcCCEEEEE
Confidence 368988865432 34677888999999998763
No 349
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.48 E-value=0.02 Score=49.75 Aligned_cols=96 Identities=20% Similarity=0.308 Sum_probs=65.9
Q ss_pred HHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------cC
Q 022810 57 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ME 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~------~~ 128 (291)
+...++++.+||-+|+ |.|..+..+++.. +++|++++.+++.++.+++ .|.+. ++..+ .++. ..
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga~~--v~~~~-~~~~~~v~~~~~ 224 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKS----VGADI--VLPLE-EGWAKAVREATG 224 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH----HTCSE--EEESS-TTHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCcE--EecCc-hhHHHHHHHHhC
Confidence 4567789999999997 4688888888876 8899999999987776654 34422 22222 2211 11
Q ss_pred -CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 129 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 -~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
..+|+|+....- ..+..+.+.|+++|.+++..
T Consensus 225 ~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 225 GAGVDMVVDPIGG-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp TSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred CCCceEEEECCch-------hHHHHHHHhhcCCCEEEEEE
Confidence 369999875432 24677888999999987743
No 350
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.47 E-value=0.029 Score=48.45 Aligned_cols=75 Identities=7% Similarity=0.084 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC-CCCEE-EEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC----CCccEEEE
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY-SNCKI-TGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----ASYDRIYS 136 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~-p~~~v-~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~----~~~D~v~~ 136 (291)
...+++|+.||.|.++..+.+.. +...+ .++|+++.+++..+.|... . ++.+|+.++... ..+|+++.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-----~-~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-----E-VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-----C-CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-----C-cccCChhhcCHHHhccCCCCEEEe
Confidence 35689999999999999998762 11345 6999999988887777632 1 567888877532 36899998
Q ss_pred ccccccc
Q 022810 137 IEMFEHM 143 (291)
Q Consensus 137 ~~~l~~~ 143 (291)
.++-+.+
T Consensus 83 gpPCQ~f 89 (327)
T 3qv2_A 83 SPPCQPY 89 (327)
T ss_dssp CCCCTTC
T ss_pred cCCccCc
Confidence 7764443
No 351
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.46 E-value=0.026 Score=48.98 Aligned_cols=101 Identities=8% Similarity=-0.004 Sum_probs=63.5
Q ss_pred HHHcCCCCCCEEEEEcCCcc-hHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCC-eEEEEccccCC----ccCC
Q 022810 56 CERSRLEDGHTVLDVGCGWG-SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQN-VEIIVADISTF----EMEA 129 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~G-~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~-i~~~~~d~~~~----~~~~ 129 (291)
++....+++.+||=+|+|.+ ..+..+++...+.+|+++|.+++.++.++ +.|.+. +.....|..+. ....
T Consensus 156 l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~----~~Ga~~~i~~~~~~~~~~v~~~t~g~ 231 (348)
T 4eez_A 156 IKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK----KIGADVTINSGDVNPVDEIKKITGGL 231 (348)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH----HTTCSEEEEC-CCCHHHHHHHHTTSS
T ss_pred ecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh----hcCCeEEEeCCCCCHHHHhhhhcCCC
Confidence 45567789999999999864 56666666555789999999998665554 344421 11111221110 1113
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 130 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
.+|.++.... -...+....+.|+++|.+++.
T Consensus 232 g~d~~~~~~~------~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 232 GVQSAIVCAV------ARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp CEEEEEECCS------CHHHHHHHHHTEEEEEEEEEC
T ss_pred CceEEEEecc------CcchhheeheeecCCceEEEE
Confidence 4666655322 245678888999999998764
No 352
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.45 E-value=0.052 Score=47.82 Aligned_cols=97 Identities=16% Similarity=0.125 Sum_probs=65.3
Q ss_pred HHcC-CCCCCEEEEEcCC-cchHHHHHHHHCCC-CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcc------ccC-Cc
Q 022810 57 ERSR-LEDGHTVLDVGCG-WGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVAD------IST-FE 126 (291)
Q Consensus 57 ~~~~-~~~~~~vLDiGcG-~G~~~~~l~~~~p~-~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d------~~~-~~ 126 (291)
...+ +.++.+||-+|+| .|..+..+++.. + .+|++++.+++.++.++ +.|.+. ++..+ +.+ +.
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~--vi~~~~~~~~~~~~~v~ 260 (380)
T 1vj0_A 188 DEYPESFAGKTVVIQGAGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAE----EIGADL--TLNRRETSVEERRKAIM 260 (380)
T ss_dssp HTCSSCCBTCEEEEECCSHHHHHHHHHHHHT-TBSEEEEEESCHHHHHHHH----HTTCSE--EEETTTSCHHHHHHHHH
T ss_pred HhcCCCCCCCEEEEECcCHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHH----HcCCcE--EEeccccCcchHHHHHH
Confidence 4567 7889999999977 477888888876 7 59999999998776665 345422 22221 111 10
Q ss_pred --cC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 127 --ME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 127 --~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
.. ..+|+|+-.... ...+..+.+.|+++|.++..
T Consensus 261 ~~~~g~g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 261 DITHGRGADFILEATGD------SRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HHTTTSCEEEEEECSSC------TTHHHHHHHHEEEEEEEEEC
T ss_pred HHhCCCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEE
Confidence 11 368998865321 23567788899999998764
No 353
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.31 E-value=0.12 Score=45.01 Aligned_cols=96 Identities=20% Similarity=0.317 Sum_probs=65.3
Q ss_pred HHcCCCCCCEEEEEc--CCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------cC
Q 022810 57 ERSRLEDGHTVLDVG--CGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ME 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiG--cG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~------~~ 128 (291)
+...++++.+||-+| .|.|..+..+++.. +++|++++.+++.++.+++ .|.+ .++..+-.++. ..
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~----~Ga~--~~~~~~~~~~~~~~~~~~~ 229 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKS----LGCD--RPINYKTEPVGTVLKQEYP 229 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----TTCS--EEEETTTSCHHHHHHHHCT
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH----cCCc--EEEecCChhHHHHHHHhcC
Confidence 445678899999999 45788888888876 8899999999887766553 4442 12221111110 11
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
..+|+|+....- ..++.+.+.|+++|.+++.
T Consensus 230 ~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 230 EGVDVVYESVGG-------AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp TCEEEEEECSCT-------HHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECCCH-------HHHHHHHHHHhcCCEEEEE
Confidence 468998865431 4677888999999987764
No 354
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.21 E-value=0.043 Score=47.88 Aligned_cols=94 Identities=14% Similarity=0.169 Sum_probs=61.8
Q ss_pred HHcCCCCC------CEEEEEcCC-cchHH-HHHH-HHCCCCE-EEEEcCCHH---HHHHHHHHHHHhCCCCeEEEEcccc
Q 022810 57 ERSRLEDG------HTVLDVGCG-WGSLS-LYIA-QKYSNCK-ITGICNSKT---QKEFIEEQCRVLELQNVEIIVADIS 123 (291)
Q Consensus 57 ~~~~~~~~------~~vLDiGcG-~G~~~-~~l~-~~~p~~~-v~~vD~s~~---~~~~a~~~~~~~~~~~i~~~~~d~~ 123 (291)
+...++++ .+||-+|+| .|..+ ..++ +.. +++ |++++.+++ ..+.++ +.|. ..+ |..
T Consensus 160 ~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~----~lGa---~~v--~~~ 229 (357)
T 2b5w_A 160 EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIE----ELDA---TYV--DSR 229 (357)
T ss_dssp HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHH----HTTC---EEE--ETT
T ss_pred HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHH----HcCC---ccc--CCC
Confidence 34455678 999999986 46777 7888 655 676 999999887 666654 3443 222 322
Q ss_pred CCcc------CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 124 TFEM------EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 124 ~~~~------~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+... .+.+|+|+-...- ...++.+.+.|+++|+++..
T Consensus 230 ~~~~~~i~~~~gg~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 230 QTPVEDVPDVYEQMDFIYEATGF------PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp TSCGGGHHHHSCCEEEEEECSCC------HHHHHHHHHHEEEEEEEEEC
T ss_pred ccCHHHHHHhCCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEE
Confidence 2110 1268888754321 34678888999999998764
No 355
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.20 E-value=0.036 Score=48.01 Aligned_cols=73 Identities=10% Similarity=0.134 Sum_probs=53.7
Q ss_pred CEEEEEcCCcchHHHHHHHHCCC-CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC----CCccEEEEccc
Q 022810 65 HTVLDVGCGWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----ASYDRIYSIEM 139 (291)
Q Consensus 65 ~~vLDiGcG~G~~~~~l~~~~p~-~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~----~~~D~v~~~~~ 139 (291)
.+++|+.||.|.++..+.+..-+ ..+.++|+++.+++..+.|+. ...++.+|+.++... ..+|+++..++
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~~DI~~~~~~~~~~~~~D~l~ggpP 78 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP-----ETNLLNRNIQQLTPQVIKKWNVDTILMSPP 78 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECCCGGGCCHHHHHHTTCCEEEECCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC-----CCceeccccccCCHHHhccCCCCEEEecCC
Confidence 48999999999999999877211 347899999998777666542 344678888876532 36899998775
Q ss_pred ccc
Q 022810 140 FEH 142 (291)
Q Consensus 140 l~~ 142 (291)
-+.
T Consensus 79 CQ~ 81 (333)
T 4h0n_A 79 CQP 81 (333)
T ss_dssp CCC
T ss_pred Ccc
Confidence 443
No 356
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.15 E-value=0.096 Score=45.09 Aligned_cols=95 Identities=11% Similarity=0.087 Sum_probs=64.0
Q ss_pred cCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-------cCC
Q 022810 59 SRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------MEA 129 (291)
Q Consensus 59 ~~~~~~~~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~-------~~~ 129 (291)
..++++.+||-+|+ |.|..+..+++.. +++|++++.+++.++.+++ .|.+ .++..+-.+.. ...
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga~--~~~~~~~~~~~~~~~~~~~~~ 216 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKE----YGAE--YLINASKEDILRQVLKFTNGK 216 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----TTCS--EEEETTTSCHHHHHHHHTTTS
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCc--EEEeCCCchHHHHHHHHhCCC
Confidence 46788999999994 4677888888776 8899999999987766543 3432 12222111111 114
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 130 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
.+|+|+.+..- ..++.+.+.|+++|.+++..
T Consensus 217 g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 217 GVDASFDSVGK-------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp CEEEEEECCGG-------GGHHHHHHHEEEEEEEEECC
T ss_pred CceEEEECCCh-------HHHHHHHHHhccCCEEEEEc
Confidence 69998875432 35677788999999987743
No 357
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.14 E-value=0.011 Score=50.45 Aligned_cols=56 Identities=11% Similarity=0.083 Sum_probs=42.0
Q ss_pred CCeEEEEccccCCc--cC-CCccEEEEcccccccc--------------------cHHHHHHHHHhccccCeeEEEEee
Q 022810 113 QNVEIIVADISTFE--ME-ASYDRIYSIEMFEHMK--------------------NYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 113 ~~i~~~~~d~~~~~--~~-~~~D~v~~~~~l~~~~--------------------~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
.+++++++|+.+.. .+ ++||+|++++++.... ....+++++.++|+|||.+++...
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 36789999998732 23 7899999999875321 124577889999999999988754
No 358
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.00 E-value=0.077 Score=46.02 Aligned_cols=96 Identities=14% Similarity=0.102 Sum_probs=64.1
Q ss_pred HHcCCCCCCEEEEEcCC-cchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-------c
Q 022810 57 ERSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------M 127 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG-~G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~-------~ 127 (291)
+...+ ++.+||-+|+| .|..+..+++.. ++ +|++++.+++.++.+++ .|.+. ++..+-.++. .
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~----~Ga~~--~~~~~~~~~~~~v~~~~~ 233 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKK----VGADY--VINPFEEDVVKEVMDITD 233 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHH----HTCSE--EECTTTSCHHHHHHHHTT
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH----hCCCE--EECCCCcCHHHHHHHHcC
Confidence 45567 89999999996 377788888776 77 89999999987766653 34421 1211111110 1
Q ss_pred CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 128 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
...+|+|+..... ...++.+.+.|+++|.++..
T Consensus 234 g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 234 GNGVDVFLEFSGA------PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp TSCEEEEEECSCC------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEE
Confidence 1368998865432 35678888999999998764
No 359
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=94.92 E-value=0.13 Score=44.80 Aligned_cols=96 Identities=19% Similarity=0.226 Sum_probs=64.6
Q ss_pred HHcCCCCCCEEEEEc--CCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc------C
Q 022810 57 ERSRLEDGHTVLDVG--CGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM------E 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiG--cG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~------~ 128 (291)
+...++++.+||-+| +|.|..+..+++.. +++|++++.+++.++.+++ .|.+ ..+..+-.+... .
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~--~~~~~~~~~~~~~~~~~~~ 233 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACER----LGAK--RGINYRSEDFAAVIKAETG 233 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCS--EEEETTTSCHHHHHHHHHS
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCC--EEEeCCchHHHHHHHHHhC
Confidence 456778999999995 34678888888776 8899999999997776654 3442 122211111110 2
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
..+|+|+.+..- ..+....+.|+++|.+++.
T Consensus 234 ~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 234 QGVDIILDMIGA-------AYFERNIASLAKDGCLSII 264 (353)
T ss_dssp SCEEEEEESCCG-------GGHHHHHHTEEEEEEEEEC
T ss_pred CCceEEEECCCH-------HHHHHHHHHhccCCEEEEE
Confidence 468998875432 2467778899999998764
No 360
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.85 E-value=0.095 Score=44.86 Aligned_cols=97 Identities=11% Similarity=0.200 Sum_probs=63.5
Q ss_pred HHcCCCCCC-EEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--cCCCc
Q 022810 57 ERSRLEDGH-TVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--MEASY 131 (291)
Q Consensus 57 ~~~~~~~~~-~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~--~~~~~ 131 (291)
....+.++. +||=+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|.+. .+-..+..... ..+.+
T Consensus 139 ~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~-vi~~~~~~~~~~~~~~~~ 212 (324)
T 3nx4_A 139 EDAGIRPQDGEVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKS----LGANR-ILSRDEFAESRPLEKQLW 212 (324)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHH----HTCSE-EEEGGGSSCCCSSCCCCE
T ss_pred hhcccCCCCCeEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCCE-EEecCCHHHHHhhcCCCc
Confidence 344455422 4999997 4788899999877 8899999999998777754 45422 11112211111 11568
Q ss_pred cEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 132 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 132 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
|+|+-.. .. ..+..+.+.|+|+|+++..
T Consensus 213 d~v~d~~-----g~--~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 213 AGAIDTV-----GD--KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp EEEEESS-----CH--HHHHHHHHTEEEEEEEEEC
T ss_pred cEEEECC-----Cc--HHHHHHHHHHhcCCEEEEE
Confidence 8877542 11 2788889999999998774
No 361
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.80 E-value=0.052 Score=47.39 Aligned_cols=99 Identities=18% Similarity=0.123 Sum_probs=64.0
Q ss_pred HHcCCCCCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcccc-CCc--cCCCcc
Q 022810 57 ERSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIS-TFE--MEASYD 132 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~-~~~--~~~~~D 132 (291)
...++.++.+||-+|+| .|..+..+++.. +++|++++.+++.++.+++ .|.+. ++..+-. +.. ..+.+|
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~--v~~~~~~~~~~~~~~~~~D 245 (360)
T 1piw_A 173 VRNGCGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMK----MGADH--YIATLEEGDWGEKYFDTFD 245 (360)
T ss_dssp HHTTCSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHH----HTCSE--EEEGGGTSCHHHHSCSCEE
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH----cCCCE--EEcCcCchHHHHHhhcCCC
Confidence 34678899999999986 477788888765 7899999999887776654 34422 2221111 111 014689
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 133 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+|+...... ....++.+.+.|+++|.++..
T Consensus 246 ~vid~~g~~----~~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 246 LIVVCASSL----TDIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEEECCSCS----TTCCTTTGGGGEEEEEEEEEC
T ss_pred EEEECCCCC----cHHHHHHHHHHhcCCCEEEEe
Confidence 988654320 012345667889999998764
No 362
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.77 E-value=0.12 Score=44.21 Aligned_cols=93 Identities=10% Similarity=0.117 Sum_probs=62.7
Q ss_pred HcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--------c
Q 022810 58 RSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--------M 127 (291)
Q Consensus 58 ~~~~~~~~~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~--------~ 127 (291)
...++++.+||-.|+ |.|..+..+++.. +++|++++.+++.++.+++ .+.+ . .+ |..+.. .
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~----~g~~-~-~~--~~~~~~~~~~~~~~~ 205 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALK----AGAW-Q-VI--NYREEDLVERLKEIT 205 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHH----HTCS-E-EE--ETTTSCHHHHHHHHT
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----cCCC-E-EE--ECCCccHHHHHHHHh
Confidence 456788999999993 5677777776655 7899999999887766654 3432 1 11 222111 0
Q ss_pred -CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 128 -EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 -~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
...+|+|+.+.. ...++.+.+.|+++|.+++.
T Consensus 206 ~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 206 GGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp TTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEEC
T ss_pred CCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEE
Confidence 136899887643 24567788999999998764
No 363
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.77 E-value=0.1 Score=44.81 Aligned_cols=97 Identities=15% Similarity=0.124 Sum_probs=64.9
Q ss_pred HHcCCCCCCEEEEEc-C-CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------cC
Q 022810 57 ERSRLEDGHTVLDVG-C-GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ME 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiG-c-G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~------~~ 128 (291)
+...++++.+||-+| + |.|..+..+++.. +++|++++.+++.++.+++ .|.+ ..+..+-.+.. ..
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~Ga~--~~~~~~~~~~~~~~~~~~~ 206 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKA----LGAW--ETIDYSHEDVAKRVLELTD 206 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHH----HTCS--EEEETTTSCHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCC--EEEeCCCccHHHHHHHHhC
Confidence 345678899999999 3 4678888888765 8899999999987776653 3432 12221111111 11
Q ss_pred -CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 129 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 -~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
..+|+|+.+..- ..+..+.+.|+++|.+++..
T Consensus 207 ~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 207 GKKCPVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp TCCEEEEEESSCG-------GGHHHHHTTEEEEEEEEECC
T ss_pred CCCceEEEECCCh-------HHHHHHHHHhcCCCEEEEEe
Confidence 469998875432 35677888999999987743
No 364
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.74 E-value=0.26 Score=43.67 Aligned_cols=96 Identities=15% Similarity=0.114 Sum_probs=61.0
Q ss_pred CCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-------cCCC
Q 022810 60 RLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------MEAS 130 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~-G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~-------~~~~ 130 (291)
.++++.+||=+|+|. |..+..+++.. ++ +|+++|.+++.++.+++ .|.+ .++..+-.++. ....
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~~----lGa~--~vi~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHA-GASKVILSEPSEVRRNLAKE----LGAD--HVIDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHHH----HTCS--EEECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH----cCCC--EEEcCCCCCHHHHHHHHhCCCC
Confidence 577899999999874 77888888876 77 99999999987776654 3442 12221111111 1136
Q ss_pred ccEEEEcccccccccHHHHHHHHH----hccccCeeEEEEe
Q 022810 131 YDRIYSIEMFEHMKNYQNLLKKIS----KWMKEDTLLFVHH 167 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~~~~~l~~~~----~~L~pgG~l~i~~ 167 (291)
+|+|+-... .....+..+. +.++++|.+++..
T Consensus 283 ~D~vid~~g-----~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 283 AKLFLEATG-----VPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp CSEEEECSS-----CHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CCEEEECCC-----CcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 999886432 2222344444 4449999987743
No 365
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.67 E-value=0.22 Score=43.16 Aligned_cols=94 Identities=20% Similarity=0.239 Sum_probs=63.4
Q ss_pred HHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--------
Q 022810 57 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------- 126 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~-------- 126 (291)
+...++++.+||-.|+ |.|..+..+++.. +++|++++.+++.++.++ +.+.+ ..+ |..+..
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~----~~ga~--~~~--d~~~~~~~~~~~~~ 234 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVL----QNGAH--EVF--NHREVNYIDKIKKY 234 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH----HTTCS--EEE--ETTSTTHHHHHHHH
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHH----HcCCC--EEE--eCCCchHHHHHHHH
Confidence 3457788999999997 4677777777765 789999999998766543 33432 112 222111
Q ss_pred c-CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 127 M-EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 127 ~-~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
. ...+|+|+.+..- ..+....+.|+++|.+++.
T Consensus 235 ~~~~~~D~vi~~~G~-------~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 235 VGEKGIDIIIEMLAN-------VNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp HCTTCEEEEEESCHH-------HHHHHHHHHEEEEEEEEEC
T ss_pred cCCCCcEEEEECCCh-------HHHHHHHHhccCCCEEEEE
Confidence 0 1368998876431 3467778999999998764
No 366
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.63 E-value=0.2 Score=43.05 Aligned_cols=93 Identities=17% Similarity=0.206 Sum_probs=63.5
Q ss_pred HcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc---------
Q 022810 58 RSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--------- 126 (291)
Q Consensus 58 ~~~~~~~~~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~--------- 126 (291)
...+.++.+||-.|+ |.|..+..+++.. +++|++++.+++.++.+++ .+.+ . .+ |..+..
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~----~g~~-~-~~--d~~~~~~~~~i~~~~ 210 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARK----LGCH-H-TI--NYSTQDFAEVVREIT 210 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCS-E-EE--ETTTSCHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCC-E-EE--ECCCHHHHHHHHHHh
Confidence 456788999999995 5777777777765 7899999999987766643 3432 1 11 222211
Q ss_pred cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 127 MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 127 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
....+|+|+.+..- ..++.+.+.|+++|.++..
T Consensus 211 ~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 211 GGKGVDVVYDSIGK-------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp TTCCEEEEEECSCT-------TTHHHHHHTEEEEEEEEEC
T ss_pred CCCCCeEEEECCcH-------HHHHHHHHhhccCCEEEEE
Confidence 01368998865432 3567788999999997764
No 367
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.49 E-value=0.2 Score=43.21 Aligned_cols=92 Identities=11% Similarity=0.158 Sum_probs=63.7
Q ss_pred cCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--------cC
Q 022810 59 SRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--------ME 128 (291)
Q Consensus 59 ~~~~~~~~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~--------~~ 128 (291)
..++++.+||-+|+ |.|..+..+++.. +.+|++++.+++.++.+++ .+.+. ++ |..+.. ..
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~----~ga~~--~~--d~~~~~~~~~~~~~~~ 232 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKA----LGADE--TV--NYTHPDWPKEVRRLTG 232 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCSE--EE--ETTSTTHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh----cCCCE--EE--cCCcccHHHHHHHHhC
Confidence 46778999999998 5788888888776 7899999999987776653 34321 12 222111 11
Q ss_pred -CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 129 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 -~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
..+|+|+.+.. . ..++.+.+.|+++|.++..
T Consensus 233 ~~~~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 233 GKGADKVVDHTG-A------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp TTCEEEEEESSC-S------SSHHHHHHHEEEEEEEEES
T ss_pred CCCceEEEECCC-H------HHHHHHHHhhccCCEEEEE
Confidence 36899987643 1 2467778889999987763
No 368
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.44 E-value=0.043 Score=47.89 Aligned_cols=100 Identities=20% Similarity=0.208 Sum_probs=62.2
Q ss_pred HHHcCCC-CCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-cCCCcc
Q 022810 56 CERSRLE-DGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-MEASYD 132 (291)
Q Consensus 56 ~~~~~~~-~~~~vLDiGcG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~-~~~~~D 132 (291)
+....+. ++.+||-+|+| .|..+..+++.. +++|++++.+++.++.+++ +.|.+.+ +...+..... ..+.+|
T Consensus 172 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~---~lGa~~v-i~~~~~~~~~~~~~g~D 246 (357)
T 2cf5_A 172 LSHFGLKQPGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQ---DLGADDY-VIGSDQAKMSELADSLD 246 (357)
T ss_dssp HHHTSTTSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHT---TSCCSCE-EETTCHHHHHHSTTTEE
T ss_pred HHhcCCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHH---HcCCcee-eccccHHHHHHhcCCCC
Confidence 3445677 89999999987 467777777766 7899999998876555442 3444321 1111111111 114689
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 133 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+|+-...-. ..++...+.|+|+|.++..
T Consensus 247 ~vid~~g~~------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 247 YVIDTVPVH------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp EEEECCCSC------CCSHHHHTTEEEEEEEEEC
T ss_pred EEEECCCCh------HHHHHHHHHhccCCEEEEe
Confidence 888643321 1245667899999998763
No 369
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.42 E-value=0.21 Score=43.36 Aligned_cols=96 Identities=14% Similarity=0.050 Sum_probs=62.9
Q ss_pred HHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------c-
Q 022810 57 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------M- 127 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~------~- 127 (291)
+...+.++.+||-.|+ |.|..+..+++.. +++|++++.+++.++.+++ .+.+ . .+..+-.+.. .
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~g~~-~-~~~~~~~~~~~~~~~~~~ 228 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEK----LGAA-A-GFNYKKEDFSEATLKFTK 228 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----HTCS-E-EEETTTSCHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----cCCc-E-EEecCChHHHHHHHHHhc
Confidence 4456788999999984 4677777777765 7899999999987776633 3432 1 1111111110 1
Q ss_pred CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 128 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
...+|+|+.+..- ..+....+.|+++|.+++.
T Consensus 229 ~~~~d~vi~~~G~-------~~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 229 GAGVNLILDCIGG-------SYWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp TSCEEEEEESSCG-------GGHHHHHHHEEEEEEEEEC
T ss_pred CCCceEEEECCCc-------hHHHHHHHhccCCCEEEEE
Confidence 1368998876432 1356677889999998764
No 370
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.41 E-value=0.21 Score=37.01 Aligned_cols=91 Identities=15% Similarity=0.127 Sum_probs=55.3
Q ss_pred CCEEEEEcCCc-chH-HHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----C-CCccEEEE
Q 022810 64 GHTVLDVGCGW-GSL-SLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----E-ASYDRIYS 136 (291)
Q Consensus 64 ~~~vLDiGcG~-G~~-~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----~-~~~D~v~~ 136 (291)
..+|+=+|||. |.. +..|.+. +.+|+++|.+++.++.+++ . .+.++.+|..+... . ..+|+|++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~~~~----~---g~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSRTRVDELRE----R---GVRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHH----T---TCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHH----c---CCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 35789999874 433 3333333 7899999999997765543 2 46778899876421 1 56888887
Q ss_pred cccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 137 IEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 137 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
...-. .....+-...+.+.|+..++..
T Consensus 78 ~~~~~---~~n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 78 TIPNG---YEAGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp CCSCH---HHHHHHHHHHHHHCSSSEEEEE
T ss_pred ECCCh---HHHHHHHHHHHHHCCCCeEEEE
Confidence 53221 1122233345556787776553
No 371
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.40 E-value=0.065 Score=46.91 Aligned_cols=99 Identities=20% Similarity=0.236 Sum_probs=61.7
Q ss_pred HHHcCCC-CCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEE-ccccCCc-cCCCc
Q 022810 56 CERSRLE-DGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIV-ADISTFE-MEASY 131 (291)
Q Consensus 56 ~~~~~~~-~~~~vLDiGcG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~-~d~~~~~-~~~~~ 131 (291)
+....+. ++.+||-+|+| .|..+..+++.. +++|++++.+++.++.+++ +.|.+ .++. .+..... ..+.+
T Consensus 179 l~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~---~lGa~--~v~~~~~~~~~~~~~~~~ 252 (366)
T 1yqd_A 179 LKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALK---NFGAD--SFLVSRDQEQMQAAAGTL 252 (366)
T ss_dssp HHHTTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHH---TSCCS--EEEETTCHHHHHHTTTCE
T ss_pred HHhcCcCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH---hcCCc--eEEeccCHHHHHHhhCCC
Confidence 3445677 89999999986 367777777776 7899999999886655542 33432 1121 1111111 01468
Q ss_pred cEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 132 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 132 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
|+|+...... ..++...+.|+++|.++..
T Consensus 253 D~vid~~g~~------~~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 253 DGIIDTVSAV------HPLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp EEEEECCSSC------CCSHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCcH------HHHHHHHHHHhcCCEEEEE
Confidence 9988654321 1244566788999997764
No 372
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.35 E-value=0.17 Score=43.75 Aligned_cols=93 Identities=20% Similarity=0.260 Sum_probs=63.2
Q ss_pred HHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-------c
Q 022810 57 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------M 127 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~-------~ 127 (291)
+...++++.+||-+|+ |.|..+..+++.. +++|+++ .+++.++.+++ .|.+ .+. +-.+.. .
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~----lGa~---~i~-~~~~~~~~~~~~~~ 213 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRD----LGAT---PID-ASREPEDYAAEHTA 213 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHH----HTSE---EEE-TTSCHHHHHHHHHT
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHH----cCCC---Eec-cCCCHHHHHHHHhc
Confidence 5567789999999994 4688888888876 8899999 78876665543 4542 122 222211 1
Q ss_pred CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 128 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
...+|+|+-... ...+..+.+.|+++|.+++.
T Consensus 214 ~~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 214 GQGFDLVYDTLG-------GPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp TSCEEEEEESSC-------THHHHHHHHHEEEEEEEEES
T ss_pred CCCceEEEECCC-------cHHHHHHHHHHhcCCeEEEE
Confidence 146898886432 14677788899999998763
No 373
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=94.20 E-value=0.011 Score=51.46 Aligned_cols=94 Identities=10% Similarity=0.048 Sum_probs=61.9
Q ss_pred HcCCCCCCEEEEEcCC-cchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------cCC
Q 022810 58 RSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------MEA 129 (291)
Q Consensus 58 ~~~~~~~~~vLDiGcG-~G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~------~~~ 129 (291)
...+ ++.+||-+|+| .|..+..+++.. ++ +|++++.+++.++.+++. .+ .++..+-.++. ...
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-----a~--~v~~~~~~~~~~~~~~~~~~ 230 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-----AD--RLVNPLEEDLLEVVRRVTGS 230 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-----CS--EEECTTTSCHHHHHHHHHSS
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-----HH--hccCcCccCHHHHHHHhcCC
Confidence 5567 89999999986 377788888776 77 899999998876665432 11 11111101110 023
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 130 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
.+|+|+-...- ...++...+.|+++|.++..
T Consensus 231 g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 231 GVEVLLEFSGN------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp CEEEEEECSCC------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCCC------HHHHHHHHHHHhcCCEEEEE
Confidence 68988865321 35678888999999987764
No 374
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.15 E-value=0.1 Score=45.55 Aligned_cols=86 Identities=16% Similarity=0.145 Sum_probs=56.6
Q ss_pred CCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCH---HHHHHHHHHHHHhCCCCeEEEEccccC-Ccc-----CCCccE
Q 022810 64 GHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSK---TQKEFIEEQCRVLELQNVEIIVADIST-FEM-----EASYDR 133 (291)
Q Consensus 64 ~~~vLDiGcG-~G~~~~~l~~~~p~~~v~~vD~s~---~~~~~a~~~~~~~~~~~i~~~~~d~~~-~~~-----~~~~D~ 133 (291)
+.+||-+|+| .|..+..+++.. +++|++++.++ +..+.++ +.|.+ .+ | .+ +.. ...+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~----~~ga~---~v--~-~~~~~~~~~~~~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIE----ETKTN---YY--N-SSNGYDKLKDSVGKFDV 249 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHH----HHTCE---EE--E-CTTCSHHHHHHHCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHH----HhCCc---ee--c-hHHHHHHHHHhCCCCCE
Confidence 8999999985 356666666655 78999999987 6555554 33432 22 2 22 110 146899
Q ss_pred EEEcccccccccHHHHH-HHHHhccccCeeEEEE
Q 022810 134 IYSIEMFEHMKNYQNLL-KKISKWMKEDTLLFVH 166 (291)
Q Consensus 134 v~~~~~l~~~~~~~~~l-~~~~~~L~pgG~l~i~ 166 (291)
|+..... ...+ +.+.+.|+++|.+++.
T Consensus 250 vid~~g~------~~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 250 IIDATGA------DVNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EEECCCC------CTHHHHHHGGGEEEEEEEEEC
T ss_pred EEECCCC------hHHHHHHHHHHHhcCCEEEEE
Confidence 8875432 1245 7888999999998764
No 375
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=94.13 E-value=0.16 Score=38.35 Aligned_cols=113 Identities=14% Similarity=0.084 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc
Q 022810 47 AEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE 126 (291)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~ 126 (291)
+|+..++..++.+...+| -|||+|-|+|..=.++.+.+|+.+++++|-.-.. ....-.+.-.++.+|+.+..
T Consensus 25 aQR~~L~~a~~~v~~~~G-pVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~-------hp~~~P~~e~~ilGdi~~tL 96 (174)
T 3iht_A 25 SQRACLEHAIAQTAGLSG-PVYELGLGNGRTYHHLRQHVQGREIYVFERAVAS-------HPDSTPPEAQLILGDIRETL 96 (174)
T ss_dssp HHHHHHHHHHHHTTTCCS-CEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCC-------CGGGCCCGGGEEESCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCC-ceEEecCCCChhHHHHHHhCCCCcEEEEEeeecc-------CCCCCCchHheecccHHHHH
Confidence 345556777776665555 6999999999999999999999999999943210 00111122356777776642
Q ss_pred c------CCCccEEEEcccccccccH---HH-HHHHHHhccccCeeEEEEe
Q 022810 127 M------EASYDRIYSIEMFEHMKNY---QN-LLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 127 ~------~~~~D~v~~~~~l~~~~~~---~~-~l~~~~~~L~pgG~l~i~~ 167 (291)
. ..+.-++.+..-.+.-+.- .. +-.-+..+|.|||+++-..
T Consensus 97 ~~~~~r~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~ 147 (174)
T 3iht_A 97 PATLERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSD 147 (174)
T ss_dssp HHHHHHHCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred HHHHHhcCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCC
Confidence 1 1233333333222221111 11 2234567899999876543
No 376
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.05 E-value=0.14 Score=43.36 Aligned_cols=91 Identities=9% Similarity=0.046 Sum_probs=61.6
Q ss_pred CCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccc-cCCccC-CCccEEEE
Q 022810 61 LEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADI-STFEME-ASYDRIYS 136 (291)
Q Consensus 61 ~~~~~~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~-~~~~~~-~~~D~v~~ 136 (291)
++++.+||-+|+ |.|..+..+++.. +++|++++.+++.++.+++ .|.+. ++..+- .+.... ..+|+|+.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga~~--~~~~~~~~~~~~~~~~~d~vid 195 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLA----LGAEE--AATYAEVPERAKAWGGLDLVLE 195 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHH----TTCSE--EEEGGGHHHHHHHTTSEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh----cCCCE--EEECCcchhHHHHhcCceEEEE
Confidence 778999999998 4677888888776 7899999999887766643 44421 121110 111111 56899887
Q ss_pred cccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 137 IEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 137 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
..- ..++.+.+.|+++|.++..
T Consensus 196 -~g~-------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 196 -VRG-------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp -CSC-------TTHHHHHTTEEEEEEEEEC
T ss_pred -CCH-------HHHHHHHHhhccCCEEEEE
Confidence 321 2467788999999987763
No 377
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=93.95 E-value=0.77 Score=37.76 Aligned_cols=75 Identities=13% Similarity=0.173 Sum_probs=55.3
Q ss_pred CCCEEEEEcCC----cch-HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------
Q 022810 63 DGHTVLDVGCG----WGS-LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------- 127 (291)
Q Consensus 63 ~~~~vLDiGcG----~G~-~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~---------- 127 (291)
.++++|=-|++ .|. .+..|++. |++|+.++.+++..+.+.+.+.+.+-.++.++.+|+.+...
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQL--GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 57889988853 343 45566665 89999999999888888777766554578889999877421
Q ss_pred C-CCccEEEEccc
Q 022810 128 E-ASYDRIYSIEM 139 (291)
Q Consensus 128 ~-~~~D~v~~~~~ 139 (291)
. +..|+++.+..
T Consensus 83 ~~G~iD~lvnnAg 95 (256)
T 4fs3_A 83 DVGNIDGVYHSIA 95 (256)
T ss_dssp HHCCCSEEEECCC
T ss_pred HhCCCCEEEeccc
Confidence 1 67899988754
No 378
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=93.92 E-value=0.056 Score=51.59 Aligned_cols=103 Identities=9% Similarity=0.101 Sum_probs=64.9
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC-------CC-----CEEEEEcC---CHHHHHHHH-----------HHHHHh-----C
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY-------SN-----CKITGICN---SKTQKEFIE-----------EQCRVL-----E 111 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~-------p~-----~~v~~vD~---s~~~~~~a~-----------~~~~~~-----~ 111 (291)
+..+|+|+|.|+|.+...+.+.+ |. .+++.+|. +.+.+..+. +..... |
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 45699999999999887775542 21 57899998 444443322 111111 1
Q ss_pred C------C---CeEEEEccccCCcc------CCCccEEEEccccccc-cc--HHHHHHHHHhccccCeeEEE
Q 022810 112 L------Q---NVEIIVADISTFEM------EASYDRIYSIEMFEHM-KN--YQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 112 ~------~---~i~~~~~d~~~~~~------~~~~D~v~~~~~l~~~-~~--~~~~l~~~~~~L~pgG~l~i 165 (291)
. + .+++..+|+.+... ...+|.++....--.. ++ ...++..+.++++|||.+..
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 0 1 46778888865321 2579999986522111 11 26789999999999998764
No 379
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.81 E-value=0.97 Score=37.12 Aligned_cols=103 Identities=11% Similarity=0.151 Sum_probs=67.2
Q ss_pred CCCEEEEEcCC----cch-HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC---------
Q 022810 63 DGHTVLDVGCG----WGS-LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME--------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG----~G~-~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~--------- 128 (291)
.++++|=.|++ .|. ++..|++. +.+|+.++.++...+.+.+.....+..++.++.+|+.+...-
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 46789999876 232 45555555 889999998877666666655544434689999999875310
Q ss_pred --CCccEEEEcccccc----------c--cc-----------HHHHHHHHHhccccCeeEEEEe
Q 022810 129 --ASYDRIYSIEMFEH----------M--KN-----------YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 --~~~D~v~~~~~l~~----------~--~~-----------~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
+..|+++.+..+.. . .+ ...+++.+...++++|.++...
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 47899988764432 1 11 1235566677778888876654
No 380
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.79 E-value=0.28 Score=42.53 Aligned_cols=97 Identities=18% Similarity=0.329 Sum_probs=64.5
Q ss_pred HHHHcCCCCC--CEEEEEcC--CcchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc---
Q 022810 55 YCERSRLEDG--HTVLDVGC--GWGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--- 126 (291)
Q Consensus 55 ~~~~~~~~~~--~~vLDiGc--G~G~~~~~l~~~~p~~-~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~--- 126 (291)
+.+...++++ .+||-.|+ |.|..+..+++.. ++ +|++++.+++.++.+++. .+.+ . . .|..+..
T Consensus 150 l~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~---~g~~-~-~--~d~~~~~~~~ 221 (357)
T 2zb4_A 150 IQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSE---LGFD-A-A--INYKKDNVAE 221 (357)
T ss_dssp HHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHT---SCCS-E-E--EETTTSCHHH
T ss_pred HHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHH---cCCc-e-E--EecCchHHHH
Confidence 3356678889 99999997 4567777777665 77 999999998766555431 3432 1 1 2222211
Q ss_pred -----cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 127 -----MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 127 -----~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
..+.+|+|+.+.. ...++.+.+.|+++|++++.
T Consensus 222 ~~~~~~~~~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 222 QLRESCPAGVDVYFDNVG-------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp HHHHHCTTCEEEEEESCC-------HHHHHHHHHTEEEEEEEEEC
T ss_pred HHHHhcCCCCCEEEECCC-------HHHHHHHHHHhccCcEEEEE
Confidence 0125898887543 25678888999999998764
No 381
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=93.70 E-value=0.44 Score=40.61 Aligned_cols=94 Identities=16% Similarity=0.200 Sum_probs=61.5
Q ss_pred HHcCCCCCCEEEEEc-CC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC-CccC-CCcc
Q 022810 57 ERSRLEDGHTVLDVG-CG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FEME-ASYD 132 (291)
Q Consensus 57 ~~~~~~~~~~vLDiG-cG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~-~~~~-~~~D 132 (291)
+...++++.+||=+| +| .|..+..+++.. +++|++++ ++...+.+ ++.|.+. ++..+-.+ +... ..+|
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~----~~lGa~~--~i~~~~~~~~~~~~~g~D 217 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFL----KALGAEQ--CINYHEEDFLLAISTPVD 217 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHH----HHHTCSE--EEETTTSCHHHHCCSCEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHH----HHcCCCE--EEeCCCcchhhhhccCCC
Confidence 667888999999997 55 688888888876 88999987 44434444 3455532 22221111 1111 5689
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEE
Q 022810 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 133 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 165 (291)
+|+-... -.. +..+.++|+++|+++.
T Consensus 218 ~v~d~~g------~~~-~~~~~~~l~~~G~iv~ 243 (321)
T 3tqh_A 218 AVIDLVG------GDV-GIQSIDCLKETGCIVS 243 (321)
T ss_dssp EEEESSC------HHH-HHHHGGGEEEEEEEEE
T ss_pred EEEECCC------cHH-HHHHHHhccCCCEEEE
Confidence 8886432 122 3778899999999876
No 382
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=93.53 E-value=0.051 Score=46.71 Aligned_cols=96 Identities=16% Similarity=0.206 Sum_probs=61.7
Q ss_pred HcCCCCCC-EEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccc-cC-Cc--cCCC
Q 022810 58 RSRLEDGH-TVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADI-ST-FE--MEAS 130 (291)
Q Consensus 58 ~~~~~~~~-~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~-~~-~~--~~~~ 130 (291)
...+.++. +||-+|+ |.|..+..+++.. +++|++++.+++.++.+++ .|.+.+ +-..+. .+ .. ....
T Consensus 143 ~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~----lGa~~~-i~~~~~~~~~~~~~~~~~ 216 (328)
T 1xa0_A 143 EHGLTPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRV----LGAKEV-LAREDVMAERIRPLDKQR 216 (328)
T ss_dssp HTTCCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHH----TTCSEE-EECC---------CCSCC
T ss_pred hcCCCCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH----cCCcEE-EecCCcHHHHHHHhcCCc
Confidence 45667775 8999997 4688888888876 7899999999887766643 444221 111111 11 00 1146
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+|+|+-...- ..+..+.+.|+++|.+++.
T Consensus 217 ~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 217 WAAAVDPVGG-------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp EEEEEECSTT-------TTHHHHHHTEEEEEEEEEC
T ss_pred ccEEEECCcH-------HHHHHHHHhhccCCEEEEE
Confidence 8988764321 2467778899999998764
No 383
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=93.45 E-value=0.18 Score=45.41 Aligned_cols=94 Identities=14% Similarity=0.156 Sum_probs=63.7
Q ss_pred cCCCCCCEEEEEcC-C-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC-----------
Q 022810 59 SRLEDGHTVLDVGC-G-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF----------- 125 (291)
Q Consensus 59 ~~~~~~~~vLDiGc-G-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~----------- 125 (291)
..++++.+||=+|+ | .|..+..+++.. ++++++++.+++.++.+++ .|.+. ++...-.+.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~d~~~~~~~~~~~~ 296 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRA----MGAEA--IIDRNAEGYRFWKDENTQDP 296 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCCE--EEETTTTTCCSEEETTEECH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHh----hCCcE--EEecCcCcccccccccccch
Confidence 46788999999997 3 688888888876 8899999998887776643 44421 121111110
Q ss_pred -------------ccCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 126 -------------EMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 126 -------------~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
.....+|+|+-... ...+..+.++|+++|.+++.
T Consensus 297 ~~~~~~~~~i~~~t~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 297 KEWKRFGKRIRELTGGEDIDIVFEHPG-------RETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEECSC-------HHHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEcCC-------chhHHHHHHHhhCCcEEEEE
Confidence 01147898876432 14677888899999998774
No 384
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.38 E-value=0.062 Score=46.30 Aligned_cols=56 Identities=18% Similarity=0.180 Sum_probs=43.2
Q ss_pred CeEEEEccccCC-c-cC-CCccEEEEccccccc--------------ccHHHHHHHHHhccccCeeEEEEeec
Q 022810 114 NVEIIVADISTF-E-ME-ASYDRIYSIEMFEHM--------------KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 114 ~i~~~~~d~~~~-~-~~-~~~D~v~~~~~l~~~--------------~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
...++++|..+. . .+ +++|+|++++++... ......++.+.++|+|||.+++....
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 578899998753 2 22 789999999987433 23567889999999999999987554
No 385
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.37 E-value=0.077 Score=48.26 Aligned_cols=76 Identities=9% Similarity=0.013 Sum_probs=54.1
Q ss_pred CCEEEEEcCCcchHHHHHHHHCCCCE-EEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---------------
Q 022810 64 GHTVLDVGCGWGSLSLYIAQKYSNCK-ITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--------------- 127 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~l~~~~p~~~-v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~--------------- 127 (291)
..+++|+.||.|.++..+.+. |.+ |.++|+++.+++..+.++... +...++.+|+.++..
T Consensus 88 ~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~~--p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i 163 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYCD--PATHHFNEDIRDITLSHQEGVSDEAAAEHI 163 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCCC--TTTCEEESCTHHHHCTTCTTSCHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhcccC--CCcceeccchhhhhhccccccchhhHHhhh
Confidence 468999999999999999876 555 789999999777666554211 234567788876531
Q ss_pred --C-CCccEEEEccccccc
Q 022810 128 --E-ASYDRIYSIEMFEHM 143 (291)
Q Consensus 128 --~-~~~D~v~~~~~l~~~ 143 (291)
. ..+|+++..++-+.+
T Consensus 164 ~~~~~~~Dvl~gGpPCQ~F 182 (482)
T 3me5_A 164 RQHIPEHDVLLAGFPCQPF 182 (482)
T ss_dssp HHHSCCCSEEEEECCCCCC
T ss_pred hhcCCCCCEEEecCCCcch
Confidence 1 468999987765443
No 386
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=93.30 E-value=0.35 Score=43.11 Aligned_cols=46 Identities=15% Similarity=0.083 Sum_probs=35.3
Q ss_pred CCEEEEEcCCcchHHHHHHHHC----C-CCEEEEEcCCHHHHHHHHHHHHH
Q 022810 64 GHTVLDVGCGWGSLSLYIAQKY----S-NCKITGICNSKTQKEFIEEQCRV 109 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~l~~~~----p-~~~v~~vD~s~~~~~~a~~~~~~ 109 (291)
..+|+|+|.|.|.++.-+.+.. + ..+++.||+|+...+.-++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 4799999999999888776432 1 24899999999887766666654
No 387
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=93.26 E-value=0.5 Score=41.48 Aligned_cols=99 Identities=16% Similarity=0.122 Sum_probs=68.5
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC--CeEEEEccccCCccCCCccEEEEcccc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ--NVEIIVADISTFEMEASYDRIYSIEMF 140 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~--~i~~~~~d~~~~~~~~~~D~v~~~~~l 140 (291)
.+.+||.|+.+.|.++..++.. .++.+.-|--....++.|+..++++ ++++... ... .+..||+|+...+-
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~----~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~--~~~~~~~v~~~lpk 110 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH----KPYSIGDSYISELATRENLRLNGIDESSVKFLDS-TAD--YPQQPGVVLIKVPK 110 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG----CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TSC--CCSSCSEEEEECCS
T ss_pred CCCCEEEECCCCCHHHHhhccC----CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc-ccc--cccCCCEEEEEcCC
Confidence 4568999999999999988754 3355544565666677888888874 3565322 222 23679998886542
Q ss_pred cccccHHHHHHHHHhccccCeeEEEEeec
Q 022810 141 EHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 169 (291)
........|..+...|+||+.+++..-.
T Consensus 111 -~~~~l~~~L~~l~~~l~~~~~i~~~g~~ 138 (375)
T 4dcm_A 111 -TLALLEQQLRALRKVVTSDTRIIAGAKA 138 (375)
T ss_dssp -CHHHHHHHHHHHHTTCCTTSEEEEEEEG
T ss_pred -CHHHHHHHHHHHHhhCCCCCEEEEEecc
Confidence 3345567888889999999998775543
No 388
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.25 E-value=0.097 Score=45.78 Aligned_cols=99 Identities=12% Similarity=0.133 Sum_probs=56.8
Q ss_pred CCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccc
Q 022810 63 DGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 140 (291)
Q Consensus 63 ~~~~vLDiGcG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~~~l 140 (291)
++.+|+=+|+| .|..+..++... |++|+++|.+++..+.+++.... .+.....+..++... ..+|+|+.....
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~DvVI~~~~~ 240 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFGS----RVELLYSNSAEIETAVAEADLLIGAVLV 240 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGG----GSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhhCc----eeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence 35899999996 344555555555 77999999999877766544321 232222222121111 468999875543
Q ss_pred cccccHHHHHHHHHhccccCeeEEEE
Q 022810 141 EHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
.....+.-+.+...+.|+|||+++..
T Consensus 241 ~~~~~~~li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 241 PGRRAPILVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp TTSSCCCCBCHHHHTTSCTTCEEEET
T ss_pred CCCCCCeecCHHHHhhCCCCCEEEEE
Confidence 22111111134456778999976653
No 389
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.06 E-value=0.095 Score=46.15 Aligned_cols=99 Identities=13% Similarity=0.096 Sum_probs=55.7
Q ss_pred CCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccc
Q 022810 63 DGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 140 (291)
Q Consensus 63 ~~~~vLDiGcG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~~~l 140 (291)
++.+|+=+|+| .|......++.+ |.+|+++|.++..++.+++. .+. .+.....+..++... ...|+|+.....
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~---~g~-~~~~~~~~~~~l~~~l~~aDvVi~~~~~ 241 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAE---FCG-RIHTRYSSAYELEGAVKRADLVIGAVLV 241 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH---TTT-SSEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHh---cCC-eeEeccCCHHHHHHHHcCCCEEEECCCc
Confidence 57899999996 344444555555 78999999999876655432 232 222221111111111 457999874322
Q ss_pred cccccHHHHHHHHHhccccCeeEEEE
Q 022810 141 EHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
...+...-+.+...+.|+|||+++..
T Consensus 242 p~~~t~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 242 PGAKAPKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp TTSCCCCCBCHHHHTTSCTTCEEEEG
T ss_pred CCCCCcceecHHHHhcCCCCcEEEEE
Confidence 11111111235566788999987653
No 390
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.05 E-value=0.12 Score=45.30 Aligned_cols=99 Identities=14% Similarity=0.164 Sum_probs=54.5
Q ss_pred CCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccc
Q 022810 63 DGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 140 (291)
Q Consensus 63 ~~~~vLDiGcG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~~~l 140 (291)
++.+|+=+|+| .|......+... |++|+++|.++..++.+.+. .+. .+.....+..++... ..+|+|+.....
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~~~~~~~~~~---~g~-~~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGM-GAQVTILDVNHKRLQYLDDV---FGG-RVITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH---TTT-SEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHh---cCc-eEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 46899999996 244444444444 78999999999866555432 232 222222222221111 468999876543
Q ss_pred cccccHHHHHHHHHhccccCeeEEEE
Q 022810 141 EHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
.......-+.+.+.+.+++||.++..
T Consensus 240 ~~~~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 240 PGAKAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp ------CCSCHHHHTTSCTTCEEEEC
T ss_pred CccccchhHHHHHHHhhcCCCEEEEE
Confidence 21111111245667888999986653
No 391
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=93.03 E-value=1.6 Score=36.59 Aligned_cols=101 Identities=12% Similarity=0.119 Sum_probs=65.6
Q ss_pred CCCEEEEEcCCcc-----hHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------
Q 022810 63 DGHTVLDVGCGWG-----SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------- 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G-----~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~---------- 127 (291)
.++++|=.|++.| .++..|++. +.+|+.++.++...+.+.+.....+ ++.++.+|+.+...
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREA--GAELAFTYQGDALKKRVEPLAEELG--AFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHHHHHHT--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHHH
Confidence 5788999997633 244555555 8899999998766555555554443 68889999987431
Q ss_pred C-CCccEEEEcccccc----------c--cc-----------HHHHHHHHHhccccCeeEEEEe
Q 022810 128 E-ASYDRIYSIEMFEH----------M--KN-----------YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 128 ~-~~~D~v~~~~~l~~----------~--~~-----------~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
. +..|+++.+..+.. . ++ ...+.+.+...++.+|.++...
T Consensus 106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 0 47899998765432 1 11 1235556666777788876644
No 392
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=92.99 E-value=0.89 Score=38.06 Aligned_cols=77 Identities=13% Similarity=0.128 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC-cc---------C--
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-EM---------E-- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~-~~---------~-- 128 (291)
.+.+||=.|++.| ++..+++.+ .|.+|++++.++...+.+.+.+...+..++.++.+|+.+. .. .
T Consensus 11 ~~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 11 KRRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp -CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 4667887776644 444443332 2889999999998777776666655545799999999886 21 0
Q ss_pred CCccEEEEcccc
Q 022810 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~v~~~~~l 140 (291)
+..|+++.+..+
T Consensus 90 g~iD~lv~nAg~ 101 (311)
T 3o26_A 90 GKLDILVNNAGV 101 (311)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 478999988754
No 393
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.98 E-value=1.3 Score=36.81 Aligned_cols=101 Identities=11% Similarity=0.067 Sum_probs=65.5
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCC------------HHHHHHHHHHHHHhCCCCeEEEEccccCCcc
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNS------------KTQKEFIEEQCRVLELQNVEIIVADISTFEM 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s------------~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~ 127 (291)
.++++|=.|++.|. ++..|++. +.+|+.+|.+ ...++.+.......+. ++.++.+|+.+...
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-KAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC-ceEEEEccCCCHHH
Confidence 46788888876542 34445544 8899999987 6666666555555543 78999999987431
Q ss_pred ----------C-CCccEEEEccccccc------cc-----------HHHHHHHHHhccccCeeEEEE
Q 022810 128 ----------E-ASYDRIYSIEMFEHM------KN-----------YQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 ----------~-~~~D~v~~~~~l~~~------~~-----------~~~~l~~~~~~L~pgG~l~i~ 166 (291)
. +..|+++.+..+... ++ ...+++.+...|+.+|.++..
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 0 378999987654221 11 223455666777778876654
No 394
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=92.97 E-value=0.18 Score=43.18 Aligned_cols=96 Identities=14% Similarity=0.251 Sum_probs=62.5
Q ss_pred HcCCCCCC-EEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccc-cC-Cc-c-CCC
Q 022810 58 RSRLEDGH-TVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADI-ST-FE-M-EAS 130 (291)
Q Consensus 58 ~~~~~~~~-~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~-~~-~~-~-~~~ 130 (291)
..++.++. +||-+|+ |.|..+..+++.. +++|++++.+++.++.+++ .|.+.+ +-..+. .+ .. . ...
T Consensus 144 ~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~----lGa~~v-~~~~~~~~~~~~~~~~~~ 217 (330)
T 1tt7_A 144 QNGLSPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQ----LGASEV-ISREDVYDGTLKALSKQQ 217 (330)
T ss_dssp HTTCCGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHH----HTCSEE-EEHHHHCSSCCCSSCCCC
T ss_pred hcCcCCCCceEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCcEE-EECCCchHHHHHHhhcCC
Confidence 45667775 8999997 4677888888766 7899999998877766653 344221 111111 11 11 1 146
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 131 ~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+|+|+-... . ..+....+.|+++|.+++.
T Consensus 218 ~d~vid~~g-----~--~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 218 WQGAVDPVG-----G--KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp EEEEEESCC-----T--HHHHHHHTTEEEEEEEEEC
T ss_pred ccEEEECCc-----H--HHHHHHHHhhcCCCEEEEE
Confidence 898876432 2 3577888999999998764
No 395
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=92.88 E-value=1.2 Score=36.65 Aligned_cols=76 Identities=20% Similarity=0.184 Sum_probs=54.8
Q ss_pred CCCEEEEEcC-Ccc--h-HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C
Q 022810 63 DGHTVLDVGC-GWG--S-LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E 128 (291)
Q Consensus 63 ~~~~vLDiGc-G~G--~-~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~ 128 (291)
.++++|=.|+ |.| . ++..|+++ +.+|+.++.++...+.+.+.+...+..++.++.+|+.+... .
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 4678888887 444 2 45555655 88999999999887777766655544579999999987431 0
Q ss_pred -CCccEEEEcccc
Q 022810 129 -ASYDRIYSIEMF 140 (291)
Q Consensus 129 -~~~D~v~~~~~l 140 (291)
++.|+++.+..+
T Consensus 99 ~g~id~li~~Ag~ 111 (266)
T 3o38_A 99 AGRLDVLVNNAGL 111 (266)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCcEEEECCCc
Confidence 478999987754
No 396
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=92.84 E-value=0.95 Score=38.16 Aligned_cols=75 Identities=15% Similarity=0.156 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-----------
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~----------- 128 (291)
.+.+||=.|++.|. ++..|+++ |.+|++++.++..++.+.+.+...+. ++.++.+|+.+...-
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARR--GARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 57789988887542 34444544 88999999999988877777766654 789999999874310
Q ss_pred CCccEEEEcccc
Q 022810 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~v~~~~~l 140 (291)
+..|+++.+..+
T Consensus 107 g~id~lvnnAg~ 118 (301)
T 3tjr_A 107 GGVDVVFSNAGI 118 (301)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 378999987654
No 397
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=92.79 E-value=0.15 Score=48.55 Aligned_cols=103 Identities=13% Similarity=0.147 Sum_probs=65.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC-------C---C--CEEEEEcC---CHHHHHHHHH-----------HHHHhCC----
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY-------S---N--CKITGICN---SKTQKEFIEE-----------QCRVLEL---- 112 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~-------p---~--~~v~~vD~---s~~~~~~a~~-----------~~~~~~~---- 112 (291)
+.-+|||+|-|+|.+.....+.+ | . .+++++|. +.+.+..+.. .......
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 44699999999999877765442 2 1 46899998 7766653322 2222111
Q ss_pred ----------CCeEEEEccccCCcc------CCCccEEEEccccccc-cc--HHHHHHHHHhccccCeeEEE
Q 022810 113 ----------QNVEIIVADISTFEM------EASYDRIYSIEMFEHM-KN--YQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 113 ----------~~i~~~~~d~~~~~~------~~~~D~v~~~~~l~~~-~~--~~~~l~~~~~~L~pgG~l~i 165 (291)
-.+++..+|+.+... ...+|+++...--... ++ ...++..+.++++|||.+..
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 134566777765321 2569999986522111 11 36789999999999998765
No 398
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=92.76 E-value=0.55 Score=40.70 Aligned_cols=98 Identities=10% Similarity=0.188 Sum_probs=56.4
Q ss_pred HcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEE-cCCHHHHHHHHHHHHHhCCCCeEEEEc------cccCCccC
Q 022810 58 RSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGI-CNSKTQKEFIEEQCRVLELQNVEIIVA------DISTFEME 128 (291)
Q Consensus 58 ~~~~~~~~~vLDiGc--G~G~~~~~l~~~~p~~~v~~v-D~s~~~~~~a~~~~~~~~~~~i~~~~~------d~~~~~~~ 128 (291)
...+.++.+||-+|+ |.|..+..+++.. +++++++ +.++.. +...+.+++.|.+. ++.. ++.+....
T Consensus 162 ~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~-~~~~~~~~~lGa~~--vi~~~~~~~~~~~~~~~~ 237 (357)
T 1zsy_A 162 FEQLQPGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDI-QKLSDRLKSLGAEH--VITEEELRRPEMKNFFKD 237 (357)
T ss_dssp SSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCH-HHHHHHHHHTTCSE--EEEHHHHHSGGGGGTTSS
T ss_pred HhccCCCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccch-HHHHHHHHhcCCcE--EEecCcchHHHHHHHHhC
Confidence 356789999999997 4788888888876 7766554 444321 11123344555532 2221 11111111
Q ss_pred -CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 129 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 -~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
..+|+|+-.-. . ... ....++|+++|.+++.
T Consensus 238 ~~~~Dvvid~~g-----~-~~~-~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 238 MPQPRLALNCVG-----G-KSS-TELLRQLARGGTMVTY 269 (357)
T ss_dssp SCCCSEEEESSC-----H-HHH-HHHHTTSCTTCEEEEC
T ss_pred CCCceEEEECCC-----c-HHH-HHHHHhhCCCCEEEEE
Confidence 24898875422 1 222 4567899999998764
No 399
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.42 E-value=0.088 Score=46.26 Aligned_cols=95 Identities=14% Similarity=0.147 Sum_probs=55.8
Q ss_pred CCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcc--------------------
Q 022810 63 DGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVAD-------------------- 121 (291)
Q Consensus 63 ~~~~vLDiGcG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d-------------------- 121 (291)
++.+|+=+|+| .|..+..++..+ |++|+++|.++..++.+.+ .|. +++..+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~----lGa---~~~~l~~~~~~~~gya~~~~~~~~~~ 254 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL-GAKTTGYDVRPEVAEQVRS----VGA---QWLDLGIDAAGEGGYARELSEAERAQ 254 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSGGGHHHHHH----TTC---EECCCC-------------CHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCC---eEEeccccccccccchhhhhHHHHhh
Confidence 67899999998 455555555555 8899999999987666543 232 222211
Q ss_pred -ccCCccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEE
Q 022810 122 -ISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 122 -~~~~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 165 (291)
...+... ...|+|+.......-+.+.-+-+++.+.+|||++++=
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVD 300 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVD 300 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEE
T ss_pred hHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEE
Confidence 0011111 6789999753221111111123577788999886543
No 400
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.05 E-value=1.1 Score=32.93 Aligned_cols=67 Identities=12% Similarity=0.190 Sum_probs=43.7
Q ss_pred CCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----C-CCccEEEE
Q 022810 64 GHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----E-ASYDRIYS 136 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----~-~~~D~v~~ 136 (291)
..+|+=+|||. .+..+++.+ .+.+|+++|.+++.++.+++ . .+.++.+|..+... . ..+|+|+.
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~---~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLED----E---GFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T---TCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C---CCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 45799999963 444333321 27899999999987655543 2 35778888876421 1 56898887
Q ss_pred ccc
Q 022810 137 IEM 139 (291)
Q Consensus 137 ~~~ 139 (291)
...
T Consensus 77 ~~~ 79 (141)
T 3llv_A 77 TGS 79 (141)
T ss_dssp CCS
T ss_pred ecC
Confidence 543
No 401
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=91.95 E-value=1.9 Score=36.01 Aligned_cols=101 Identities=14% Similarity=0.174 Sum_probs=62.5
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHH-HHHHHHHHHHHhCCCCeEEEEccccCCcc----------C
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKT-QKEFIEEQCRVLELQNVEIIVADISTFEM----------E 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~-~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~ 128 (291)
.++++|=.|++.|. ++..|++. |.+|+.++.+.. ..+.+.+.....+. ++.++.+|+.+... .
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKEGV-KCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46788888876542 34444444 889999998765 33334444444443 78899999987431 1
Q ss_pred -CCccEEEEcccccc----c-----cc-----------HHHHHHHHHhccccCeeEEEE
Q 022810 129 -ASYDRIYSIEMFEH----M-----KN-----------YQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 -~~~D~v~~~~~l~~----~-----~~-----------~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+..|+++.+..... + ++ ...+++.+.+.|+.+|.++..
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 47899998753321 1 11 223556667777888876654
No 402
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=91.90 E-value=2 Score=36.07 Aligned_cols=101 Identities=16% Similarity=0.179 Sum_probs=65.4
Q ss_pred CCCEEEEEcCCc----ch-HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------
Q 022810 63 DGHTVLDVGCGW----GS-LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------- 127 (291)
Q Consensus 63 ~~~~vLDiGcG~----G~-~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~---------- 127 (291)
.++++|=.|++. |. ++..|++. |.+|+.++.++...+.+.+.....+ ++.++.+|+.+...
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQ--GAEVALTYLSETFKKRVDPLAESLG--VKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHHT--CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHH
Confidence 467899999753 32 45555555 8899999999876666655555544 46888999887431
Q ss_pred C-CCccEEEEcccccc----------c--cc-----------HHHHHHHHHhccccCeeEEEEe
Q 022810 128 E-ASYDRIYSIEMFEH----------M--KN-----------YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 128 ~-~~~D~v~~~~~l~~----------~--~~-----------~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
. +..|+++.+..+.. . .+ ...+.+.+...++.+|.++...
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 0 47899998775432 1 11 1234556666777788876644
No 403
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=91.84 E-value=0.23 Score=43.44 Aligned_cols=93 Identities=17% Similarity=0.220 Sum_probs=58.8
Q ss_pred CCCCCEEEEEc-CC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc---cC-CCccEE
Q 022810 61 LEDGHTVLDVG-CG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE---ME-ASYDRI 134 (291)
Q Consensus 61 ~~~~~~vLDiG-cG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~---~~-~~~D~v 134 (291)
+.++.+||-+| +| .|..+..+++.. +++|++++ +++..+.+ ++.|.+. ++..+-.+.. .. ..+|+|
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~----~~lGa~~--v~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELV----RKLGADD--VIDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHH----HHTTCSE--EEETTSSCHHHHHHTSCCBSEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHH----HHcCCCE--EEECCchHHHHHHhhcCCCCEE
Confidence 67899999999 34 688888888876 78999998 66655544 3445421 1211111111 11 468988
Q ss_pred EEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 135 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 135 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+-...- ....+....+.|+++|.++..
T Consensus 253 id~~g~-----~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 253 LDNVGG-----STETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp EESSCT-----THHHHGGGGBCSSSCCEEEES
T ss_pred EECCCC-----hhhhhHHHHHhhcCCcEEEEe
Confidence 865321 123456677889999998763
No 404
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=91.79 E-value=0.9 Score=37.20 Aligned_cols=102 Identities=12% Similarity=0.063 Sum_probs=63.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC---CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-----------
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY---SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~---p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~----------- 128 (291)
.+.+||=.|+ +|.++..+++.+ .+.+|++++.++...+.+.+.+...+. ++.++.+|+.+...-
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4567776664 565555554432 278999999988776666665555443 688999998874210
Q ss_pred CCccEEEEccccccc--------cc-----------HHHHHHHHHhccccCeeEEEE
Q 022810 129 ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~--------~~-----------~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+.+|+|+.+...... .+ ...+++.+.+.++++|.+++.
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 378999877643211 11 123455566666667776654
No 405
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=91.79 E-value=1.9 Score=37.55 Aligned_cols=91 Identities=7% Similarity=-0.028 Sum_probs=59.3
Q ss_pred CCCCEEEEEcCC--cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------cCCCccE
Q 022810 62 EDGHTVLDVGCG--WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------MEASYDR 133 (291)
Q Consensus 62 ~~~~~vLDiGcG--~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~------~~~~~D~ 133 (291)
.++.+||=+|++ .|..+..+++.. +++|+++. +++.++.++ +.|.+ .++...-.++. ..+.+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~----~lGa~--~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAK----SRGAE--EVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHH----HTTCS--EEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHH----HcCCc--EEEECCCchHHHHHHHHccCCccE
Confidence 788999999983 788999999876 88998885 777665554 44542 22222111111 1145898
Q ss_pred EEEcccccccccHHHHHHHHHhcc-ccCeeEEEE
Q 022810 134 IYSIEMFEHMKNYQNLLKKISKWM-KEDTLLFVH 166 (291)
Q Consensus 134 v~~~~~l~~~~~~~~~l~~~~~~L-~pgG~l~i~ 166 (291)
|+-.-.- ...+..+.+.| +++|+++..
T Consensus 235 v~d~~g~------~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 235 ALDCITN------VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp EEESSCS------HHHHHHHHHHSCTTCEEEEES
T ss_pred EEECCCc------hHHHHHHHHHhhcCCCEEEEE
Confidence 8864321 35567777888 699998764
No 406
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=91.71 E-value=1.1 Score=36.71 Aligned_cols=99 Identities=10% Similarity=0.157 Sum_probs=63.1
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---------C--
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------E-- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~---------~-- 128 (291)
.++++|=.|++.|. ++..|++. |.+|+.++.++..++...+.. + .++.++.+|+.+... .
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEG--GAEVLLTGRNESNIARIREEF---G-PRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH---G-GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh---C-CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 46788888876542 34444444 889999999988766554433 2 268899999987431 1
Q ss_pred CCccEEEEccccccc--------cc-----------HHHHHHHHHhccccCeeEEEEe
Q 022810 129 ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~--------~~-----------~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
+..|+++.+...... ++ .-.+.+.+...++.+|.++...
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 478999887644221 11 1224555666677788766543
No 407
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=91.57 E-value=2.1 Score=35.20 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=64.0
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcC-CHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICN-SKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~-s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~ 128 (291)
.++++|=.|++.|. ++..|++. |.+|+.++. +....+...+.+...+. ++.++.+|+.+... .
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRL--GAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788888876542 34444444 889988765 45555555555555553 78899999987431 0
Q ss_pred -CCccEEEEccccccc--------cc-----------HHHHHHHHHhccccCeeEEEEee
Q 022810 129 -ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 129 -~~~D~v~~~~~l~~~--------~~-----------~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
+..|+++.+...... ++ .-.+.+.+.+.++++|.+++...
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 478999987644221 11 12355666777777887766443
No 408
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=91.50 E-value=1 Score=40.22 Aligned_cols=95 Identities=15% Similarity=0.124 Sum_probs=63.4
Q ss_pred cCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEc--ccc-----------
Q 022810 59 SRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA--DIS----------- 123 (291)
Q Consensus 59 ~~~~~~~~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~--d~~----------- 123 (291)
..++++.+||-.|+ |.|..+..+++.. ++++++++.+++.++.++ +.|.+.+ +... |..
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~----~lGa~~~-i~~~~~~~~~~~~~~~~~~~ 289 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVR----ALGCDLV-INRAELGITDDIADDPRRVV 289 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH----HTTCCCE-EEHHHHTCCTTGGGCHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH----hcCCCEE-Eecccccccccccccccccc
Confidence 56789999999997 3677888888776 889999999988776664 3454221 1111 110
Q ss_pred --------CCc--cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 124 --------TFE--MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 124 --------~~~--~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
... ....+|+|+-...- ..++...+.|+++|.+++.
T Consensus 290 ~~~~~~~~~v~~~~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 290 ETGRKLAKLVVEKAGREPDIVFEHTGR-------VTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEEECSCH-------HHHHHHHHHSCTTCEEEES
T ss_pred hhhhHHHHHHHHHhCCCceEEEECCCc-------hHHHHHHHHHhcCCEEEEE
Confidence 000 02468998875331 3567788899999998774
No 409
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=91.41 E-value=0.54 Score=40.81 Aligned_cols=98 Identities=10% Similarity=0.141 Sum_probs=58.5
Q ss_pred cCCCCC-CEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEc------cccC-Cc--
Q 022810 59 SRLEDG-HTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA------DIST-FE-- 126 (291)
Q Consensus 59 ~~~~~~-~~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~------d~~~-~~-- 126 (291)
..++++ .+||-+|+ |.|..+..+++.. +++++++..+++.++..++.+++.|.+. ++.. |+.+ +.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~~--vi~~~~~~~~~~~~~i~~~ 238 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKELGATQ--VITEDQNNSREFGPTIKEW 238 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHHHTCSE--EEEHHHHHCGGGHHHHHHH
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHC-CCEEEEEecCccccHHHHHHHHhcCCeE--EEecCccchHHHHHHHHHH
Confidence 367788 99999997 4678888888876 7888888655443211223334556532 1211 1111 00
Q ss_pred ---cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 127 ---MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 127 ---~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
....+|+|+-.-. ..... ...++|+++|+++..
T Consensus 239 t~~~~~g~Dvvid~~G------~~~~~-~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 239 IKQSGGEAKLALNCVG------GKSST-GIARKLNNNGLMLTY 274 (364)
T ss_dssp HHHHTCCEEEEEESSC------HHHHH-HHHHTSCTTCEEEEC
T ss_pred hhccCCCceEEEECCC------chhHH-HHHHHhccCCEEEEe
Confidence 1246898886432 12233 667999999998764
No 410
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=91.35 E-value=1.7 Score=35.85 Aligned_cols=75 Identities=13% Similarity=0.011 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc----------cC-
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----------ME- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~----------~~- 128 (291)
.|+.+|--|++.|. .+..|++. |++|+.+|.+++.++.+.+.+.+.+. ++..+.+|+.+.. ..
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAA--GARVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 47777777776553 34445554 89999999999988888777777765 7888899987742 11
Q ss_pred CCccEEEEcccc
Q 022810 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~v~~~~~l 140 (291)
++.|+++.+.-+
T Consensus 85 G~iDiLVNNAG~ 96 (255)
T 4g81_D 85 IHVDILINNAGI 96 (255)
T ss_dssp CCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 578999987744
No 411
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.33 E-value=2.8 Score=30.15 Aligned_cols=90 Identities=13% Similarity=0.094 Sum_probs=50.4
Q ss_pred CCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc----c-CCCccEEEE
Q 022810 64 GHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----M-EASYDRIYS 136 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~----~-~~~~D~v~~ 136 (291)
+++|+=+|+| ..+..+++.+ .+.+|+++|.+++.++.+.+ .. .+.++.+|..+.. . ...+|+|+.
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~~---~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASA---EI---DALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HC---SSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---hc---CcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 4689989885 3333333221 27899999999876544332 11 3456677765421 1 156899887
Q ss_pred cccccccccHHHHHHHHHhccccCeeEEE
Q 022810 137 IEMFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 137 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 165 (291)
..... .....+..+.+.+.++ .+++
T Consensus 76 ~~~~~---~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 76 VTGKE---EVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp CCSCH---HHHHHHHHHHHHTTCC-CEEE
T ss_pred eeCCc---hHHHHHHHHHHHcCCC-EEEE
Confidence 64321 2223444455556775 4444
No 412
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=91.30 E-value=2.1 Score=35.77 Aligned_cols=102 Identities=7% Similarity=0.063 Sum_probs=63.5
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCC--HHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNS--KTQKEFIEEQCRVLELQNVEIIVADISTFEM---------- 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s--~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~---------- 127 (291)
.++++|=.|++.|. ++..|++. |.+|+.++.+ ....+.+.+.....+. ++.++.+|+.+...
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEECGR-KAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCGGGHHHHHHHHHHHHHTTC-CEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHHHHHHHHHcCC-cEEEEEecCCCHHHHHHHHHHHHH
Confidence 46788888876542 34444444 8899999876 3344444455555443 78889999887421
Q ss_pred C-CCccEEEEcccccc----c-----cc-----------HHHHHHHHHhccccCeeEEEEe
Q 022810 128 E-ASYDRIYSIEMFEH----M-----KN-----------YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 128 ~-~~~D~v~~~~~l~~----~-----~~-----------~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
. +..|+++.+..... + ++ ...+++.+...++.+|.++...
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 1 47899998775422 1 11 2235566667777888766643
No 413
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.30 E-value=0.14 Score=45.29 Aligned_cols=42 Identities=14% Similarity=0.232 Sum_probs=32.5
Q ss_pred CCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHH
Q 022810 63 DGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEE 105 (291)
Q Consensus 63 ~~~~vLDiGcG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~ 105 (291)
++.+|+=+|+| .|..+..++... |++|+++|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH
Confidence 57899999998 466666666666 8899999999986655543
No 414
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=91.27 E-value=2.7 Score=34.71 Aligned_cols=102 Identities=12% Similarity=0.077 Sum_probs=63.7
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCC-HHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNS-KTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s-~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~ 128 (291)
.++++|=.|++.|. ++..|++. |.+|+.++.+ ....+...+.+...+. ++.++.+|+.+... .
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALE--GAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHH
Confidence 47788988886542 34445544 8899888544 4555555555555443 78899999987431 0
Q ss_pred -CCccEEEEccccccc--------cc-----------HHHHHHHHHhccccCeeEEEEe
Q 022810 129 -ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 -~~~D~v~~~~~l~~~--------~~-----------~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
+..|+++.+..+... ++ ...+++.+.+.|+++|.++...
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 478999987644221 11 2235566667777788766643
No 415
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.15 E-value=0.58 Score=41.66 Aligned_cols=94 Identities=12% Similarity=0.117 Sum_probs=58.7
Q ss_pred CCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc----cC-CCccEEEEc
Q 022810 64 GHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----ME-ASYDRIYSI 137 (291)
Q Consensus 64 ~~~vLDiGcG~-G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~----~~-~~~D~v~~~ 137 (291)
..+|+=+|+|. |.......... +..|+++|.+++.++.+++ . .+.++.+|+.+.. .. ...|+|++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~~~v~~~~~----~---g~~vi~GDat~~~~L~~agi~~A~~viv~ 75 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDPDHIETLRK----F---GMKVFYGDATRMDLLESAGAAKAEVLINA 75 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEECCHHHHHHHHH----T---TCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHh----C---CCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence 45788888863 33222222222 7899999999998776653 3 3567889988743 12 578888775
Q ss_pred ccccccccHHHHHHHHHhccccCeeEEEEee
Q 022810 138 EMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 138 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
..- ......+....+.+.|+..+++...
T Consensus 76 ~~~---~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 76 IDD---PQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp CSS---HHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CCC---hHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 321 1223344555666788877776544
No 416
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=90.94 E-value=4.2 Score=33.29 Aligned_cols=76 Identities=8% Similarity=-0.049 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH-hCCCCeEEEEccccCCcc----------C
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV-LELQNVEIIVADISTFEM----------E 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~-~~~~~i~~~~~d~~~~~~----------~ 128 (291)
.++++|=.|++.|. ++..|++. +.+|+.++.++..++.+.+.+.. .+..++.++.+|+.+... .
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEA--GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 46788888876552 34445544 88999999999887777666655 333358899999987431 1
Q ss_pred -CCccEEEEcccc
Q 022810 129 -ASYDRIYSIEMF 140 (291)
Q Consensus 129 -~~~D~v~~~~~l 140 (291)
+..|+++.+...
T Consensus 85 ~g~id~lvnnAg~ 97 (265)
T 3lf2_A 85 LGCASILVNNAGQ 97 (265)
T ss_dssp HCSCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 478999987754
No 417
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=90.86 E-value=2.5 Score=35.89 Aligned_cols=76 Identities=13% Similarity=0.069 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCcc----------C
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM----------E 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~----------~ 128 (291)
.+.+||=.|++.|. ++..|+++ |.+|++++.++..++.+.+.+...+. .++.++.+|+.+... .
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQ--GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 46788988876552 34444444 88999999999888777776666554 268899999987431 0
Q ss_pred -CCccEEEEcccc
Q 022810 129 -ASYDRIYSIEMF 140 (291)
Q Consensus 129 -~~~D~v~~~~~l 140 (291)
+..|+++.+..+
T Consensus 85 ~g~id~lv~nAg~ 97 (319)
T 3ioy_A 85 FGPVSILCNNAGV 97 (319)
T ss_dssp TCCEEEEEECCCC
T ss_pred CCCCCEEEECCCc
Confidence 467999987754
No 418
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.82 E-value=0.21 Score=43.97 Aligned_cols=41 Identities=22% Similarity=0.234 Sum_probs=31.1
Q ss_pred CCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Q 022810 63 DGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIE 104 (291)
Q Consensus 63 ~~~~vLDiGcG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~ 104 (291)
++.+|+=+|+| .|..+..+++.+ |++|+++|.++...+.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~~ 212 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAATKEQVE 212 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence 68899999998 455566666666 789999999987655543
No 419
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=90.76 E-value=0.99 Score=41.08 Aligned_cols=89 Identities=13% Similarity=0.048 Sum_probs=55.6
Q ss_pred CCCCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccc
Q 022810 61 LEDGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEM 139 (291)
Q Consensus 61 ~~~~~~vLDiGcG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~ 139 (291)
..++.+|+=+|+| .|......++.+ +.+|+++|.++...+.++ ..|. .+ .++.+. -...|+|+....
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~----~~Ga---~~--~~l~e~--l~~aDvVi~atg 338 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAM----MEGF---DV--VTVEEA--IGDADIVVTATG 338 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHH----HTTC---EE--CCHHHH--GGGCSEEEECSS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH----HcCC---EE--ecHHHH--HhCCCEEEECCC
Confidence 4678999999997 355555555555 789999999998655443 3343 22 233222 146799987643
Q ss_pred ccccccHHHHHHHHHhccccCeeEEEE
Q 022810 140 FEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
-.++-+ ....+.|||||+++..
T Consensus 339 t~~~i~-----~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 339 NKDIIM-----LEHIKAMKDHAILGNI 360 (494)
T ss_dssp SSCSBC-----HHHHHHSCTTCEEEEC
T ss_pred CHHHHH-----HHHHHhcCCCcEEEEe
Confidence 222211 2455668999987654
No 420
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=90.72 E-value=1.2 Score=36.59 Aligned_cols=101 Identities=12% Similarity=0.041 Sum_probs=62.6
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEE-cCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGI-CNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~v-D~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~ 128 (291)
.++++|=.|++.|. ++..|+++ |.+|+.+ +.++...+.+.+.....+. ++.++.+|+.+... .
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQE--GANVVLTYNGAAEGAATAVAEIEKLGR-SALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSSCHHHHHHHHHHHTTTS-CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788888876552 34445544 8899888 6666666555555554443 68899999987431 0
Q ss_pred -CCccEEEEccccc-c------c--cc-----------HHHHHHHHHhccccCeeEEEE
Q 022810 129 -ASYDRIYSIEMFE-H------M--KN-----------YQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 -~~~D~v~~~~~l~-~------~--~~-----------~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+..|+++.+.... . . ++ .-.+.+.+...++++|.++..
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 142 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTF 142 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 4789999876432 1 1 01 123455566667667776654
No 421
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=90.47 E-value=2.5 Score=35.07 Aligned_cols=75 Identities=12% Similarity=0.050 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcC-CHHHHHHHHHHHHHhCCCCeEEEEccccCCccC----------
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICN-SKTQKEFIEEQCRVLELQNVEIIVADISTFEME---------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~-s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~---------- 128 (291)
.+.++|=.|++.|. ++..|++. |.+|+.++. +++..+...+.+...+. ++.++.+|+.+...-
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAAS--GFDIAITGIGDAEGVAPVIAELSGLGA-RVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCHHHHHHHHHHHHHTTC-CEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 46788888876542 34445544 889999985 77666666555555554 789999999875311
Q ss_pred -CCccEEEEcccc
Q 022810 129 -ASYDRIYSIEMF 140 (291)
Q Consensus 129 -~~~D~v~~~~~l 140 (291)
++.|+++.+..+
T Consensus 105 ~g~iD~lvnnAg~ 117 (280)
T 4da9_A 105 FGRIDCLVNNAGI 117 (280)
T ss_dssp HSCCCEEEEECC-
T ss_pred cCCCCEEEECCCc
Confidence 378999987754
No 422
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=90.46 E-value=2.8 Score=34.48 Aligned_cols=102 Identities=10% Similarity=0.060 Sum_probs=63.5
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEE-cCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGI-CNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~v-D~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~ 128 (291)
.++++|=.|++.|. ++..|++. |.+|+.+ ..++...+...+.....+. ++.++.+|+.+... .
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASD--GFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHH--TCEEEEEESSCSHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788888876553 45556666 8888887 4455555555555555543 78889999987431 0
Q ss_pred -CCccEEEEccccccc--------cc-----------HHHHHHHHHhccccCeeEEEEe
Q 022810 129 -ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 -~~~D~v~~~~~l~~~--------~~-----------~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
+..|+++.+..+... ++ ...+++.+.+.++++|.++...
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 478999987644221 11 1224556666677788766643
No 423
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.42 E-value=3.4 Score=33.95 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=54.2
Q ss_pred CEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcccccc
Q 022810 65 HTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFEH 142 (291)
Q Consensus 65 ~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~l~~ 142 (291)
++||=.|+ |.++..+++.+ .+.+|++++.++....... . .+++++.+|+.++. ...+|.|+.......
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~---~~~~~~~~D~~d~~-~~~~d~vi~~a~~~~ 75 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----A---SGAEPLLWPGEEPS-LDGVTHLLISTAPDS 75 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----H---TTEEEEESSSSCCC-CTTCCEEEECCCCBT
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----h---CCCeEEEecccccc-cCCCCEEEECCCccc
Confidence 68999995 77777776553 2679999998886543322 1 26899999998865 467899998765443
Q ss_pred ccc--HHHHHHHHHh
Q 022810 143 MKN--YQNLLKKISK 155 (291)
Q Consensus 143 ~~~--~~~~l~~~~~ 155 (291)
..+ ...+++.+.+
T Consensus 76 ~~~~~~~~l~~a~~~ 90 (286)
T 3ius_A 76 GGDPVLAALGDQIAA 90 (286)
T ss_dssp TBCHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHh
Confidence 322 2344444444
No 424
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.30 E-value=2.2 Score=36.31 Aligned_cols=88 Identities=22% Similarity=0.231 Sum_probs=56.4
Q ss_pred CCEEEEEcCCc--chHHHHHHHHCCCC--EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC-CccCCCccEEEEcc
Q 022810 64 GHTVLDVGCGW--GSLSLYIAQKYSNC--KITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FEMEASYDRIYSIE 138 (291)
Q Consensus 64 ~~~vLDiGcG~--G~~~~~l~~~~p~~--~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~-~~~~~~~D~v~~~~ 138 (291)
..+|.=||+|. +.++..+++. +. +|+++|.+++.++.+. +.|. +.-...|..+ . ....|+|+..-
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~--G~~~~V~~~dr~~~~~~~a~----~~G~--~~~~~~~~~~~~--~~~aDvVilav 102 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAV----DLGI--IDEGTTSIAKVE--DFSPDFVMLSS 102 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHH----HTTS--CSEEESCTTGGG--GGCCSEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC--CCCCEEEEEECCHHHHHHHH----HCCC--cchhcCCHHHHh--hccCCEEEEeC
Confidence 46899999883 3455556555 55 9999999998765544 3343 1112334333 1 14579998865
Q ss_pred cccccccHHHHHHHHHhccccCeeEE
Q 022810 139 MFEHMKNYQNLLKKISKWMKEDTLLF 164 (291)
Q Consensus 139 ~l~~~~~~~~~l~~~~~~L~pgG~l~ 164 (291)
+.. ....+++++...++|+.+++
T Consensus 103 p~~---~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 103 PVR---TFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp CGG---GHHHHHHHHHHHSCTTCEEE
T ss_pred CHH---HHHHHHHHHhhccCCCcEEE
Confidence 543 34667888888888887543
No 425
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.18 E-value=0.75 Score=34.50 Aligned_cols=94 Identities=14% Similarity=0.203 Sum_probs=51.0
Q ss_pred CCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc----c-CCCccEEE
Q 022810 62 EDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----M-EASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~-G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~----~-~~~~D~v~ 135 (291)
.++.+|+=+|||. |......+... +.+|+++|.+++.++.++. .. .+.++.+|..+.. . ...+|+|+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~---~~---g~~~~~~d~~~~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNS---EF---SGFTVVGDAAEFETLKECGMEKADMVF 89 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCT---TC---CSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHh---cC---CCcEEEecCCCHHHHHHcCcccCCEEE
Confidence 4578999999863 43333323233 7899999999875433221 11 3456667754421 1 14689888
Q ss_pred EcccccccccHHHHHHHHHhccccCeeEEE
Q 022810 136 SIEMFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 136 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 165 (291)
....- ......+..+.+.+.+...++.
T Consensus 90 ~~~~~---~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 90 AFTND---DSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp ECSSC---HHHHHHHHHHHHHTSCCSEEEE
T ss_pred EEeCC---cHHHHHHHHHHHHHCCCCeEEE
Confidence 75432 1222333344444455555544
No 426
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.01 E-value=0.2 Score=44.52 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=31.1
Q ss_pred CCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHH
Q 022810 63 DGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFI 103 (291)
Q Consensus 63 ~~~~vLDiGcG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a 103 (291)
++.+|+=+|+| .|..+..+++.+ |++|+++|.++...+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCGGGHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHH
Confidence 47899999998 455666666666 78999999999866554
No 427
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=89.91 E-value=5.8 Score=33.34 Aligned_cols=79 Identities=15% Similarity=0.156 Sum_probs=49.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEE-EccccCCccC----CCccEE
Q 022810 62 EDGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEII-VADISTFEME----ASYDRI 134 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~-~~d~~~~~~~----~~~D~v 134 (291)
.++++||=.|+ +|.++..+++.+ .+.+|++++.++...+............++.++ .+|+.+...- ..+|+|
T Consensus 9 ~~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 9 PEGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 35678998876 455555554432 278999999887765544443332211368888 7898764321 468999
Q ss_pred EEccccc
Q 022810 135 YSIEMFE 141 (291)
Q Consensus 135 ~~~~~l~ 141 (291)
+.+....
T Consensus 88 ih~A~~~ 94 (342)
T 1y1p_A 88 AHIASVV 94 (342)
T ss_dssp EECCCCC
T ss_pred EEeCCCC
Confidence 9876543
No 428
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=89.90 E-value=1.4 Score=36.12 Aligned_cols=76 Identities=20% Similarity=0.116 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcC-CHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-----------
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICN-SKTQKEFIEEQCRVLELQNVEIIVADISTFEME----------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~-s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~----------- 128 (291)
.+++||=.|+ +|.++..+++.+ .+.+|++++. ++...+...+.+...+. ++.++.+|+.+...-
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4668887765 455555554432 2789999988 77766655555554443 688899998874210
Q ss_pred CCccEEEEcccc
Q 022810 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~v~~~~~l 140 (291)
+..|+|+.+...
T Consensus 98 ~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 98 GGLDFVMSNSGM 109 (274)
T ss_dssp SCEEEEECCCCC
T ss_pred CCCCEEEECCCC
Confidence 378999876643
No 429
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=89.83 E-value=4.3 Score=33.41 Aligned_cols=77 Identities=16% Similarity=0.199 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCcc----------C-
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~----------~- 128 (291)
.+.++|=.|++ |.++..+++.+ .+.+|++++.++..++...+.+...+. .++.++.+|+.+... .
T Consensus 31 ~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 46788888765 44444444332 278999999998877666666655553 357888999877431 0
Q ss_pred CCccEEEEcccc
Q 022810 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~v~~~~~l 140 (291)
+.+|+|+.+...
T Consensus 110 g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 110 SGVDICINNAGL 121 (279)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999987643
No 430
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=89.42 E-value=2.8 Score=34.38 Aligned_cols=75 Identities=12% Similarity=0.138 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH-hCCCCeEEEEccccCCccC----------
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV-LELQNVEIIVADISTFEME---------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~-~~~~~i~~~~~d~~~~~~~---------- 128 (291)
.++++|=.|++.|. ++..|++. +.+|+.++.++..++.+.+.+.. .+. ++.++.+|+.+...-
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAA--GARLVLSGRDVSELDAARRALGEQFGT-DVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 46778877776442 34444444 88999999998887776666554 343 789999999875410
Q ss_pred -CCccEEEEcccc
Q 022810 129 -ASYDRIYSIEMF 140 (291)
Q Consensus 129 -~~~D~v~~~~~l 140 (291)
+..|+++.+...
T Consensus 96 ~g~id~lv~nAg~ 108 (266)
T 4egf_A 96 FGGLDVLVNNAGI 108 (266)
T ss_dssp HTSCSEEEEECCC
T ss_pred cCCCCEEEECCCc
Confidence 478999987644
No 431
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=89.31 E-value=2.4 Score=31.51 Aligned_cols=94 Identities=14% Similarity=0.129 Sum_probs=54.8
Q ss_pred CCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCC-HHHHHHHHHHHHHhCCCCeEEEEccccCCc----cC-CCccEEE
Q 022810 64 GHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNS-KTQKEFIEEQCRVLELQNVEIIVADISTFE----ME-ASYDRIY 135 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s-~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~----~~-~~~D~v~ 135 (291)
..+|+=+|+ |..+..+++.. .+.+|+++|.+ ++..+...... . ..+.++.+|..+.. .. ...|+|+
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---G-DNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---C-TTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---c-CCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 346888887 45554444332 27899999997 44333333221 1 24788899987632 11 5789888
Q ss_pred EcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 136 SIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 136 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+...- ......+....+.+.|...++..
T Consensus 77 ~~~~~---d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 77 ALSDN---DADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp ECSSC---HHHHHHHHHHHHHHTSSSCEEEE
T ss_pred EecCC---hHHHHHHHHHHHHHCCCCEEEEE
Confidence 75432 12234445556666777776663
No 432
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=89.26 E-value=0.14 Score=42.47 Aligned_cols=53 Identities=11% Similarity=0.075 Sum_probs=38.0
Q ss_pred eEEEEccccCCc--c-CCCccEEEEccccccc--------------ccHHHHHHHHHhccccCeeEEEEe
Q 022810 115 VEIIVADISTFE--M-EASYDRIYSIEMFEHM--------------KNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 115 i~~~~~d~~~~~--~-~~~~D~v~~~~~l~~~--------------~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
.+++++|..+.. . .+++|+|++.++...- ......+..+.++|+|+|.+++..
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 456788875431 1 2689999999987433 124567788899999999998874
No 433
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=89.08 E-value=2.5 Score=34.88 Aligned_cols=76 Identities=13% Similarity=0.117 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCC------------HHHHHHHHHHHHHhCCCCeEEEEccccCCcc
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNS------------KTQKEFIEEQCRVLELQNVEIIVADISTFEM 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s------------~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~ 127 (291)
.++++|=.|++.|. ++..|++. +.+|+++|.+ ++.++...+.....+. ++.++.+|+.+...
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAAD--GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADVRDRES 88 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCTTCHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCCCCHHH
Confidence 46788888876542 34445544 8899999976 6666655555555554 78999999987431
Q ss_pred ----------C-CCccEEEEccccc
Q 022810 128 ----------E-ASYDRIYSIEMFE 141 (291)
Q Consensus 128 ----------~-~~~D~v~~~~~l~ 141 (291)
. +..|+++.+..+.
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 0 4789999887553
No 434
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=88.99 E-value=2.1 Score=35.30 Aligned_cols=74 Identities=16% Similarity=0.141 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~- 128 (291)
+++.+|--|++.|. .+..|++. |++|+.+|.+++.++.+.+.++..+. ++.++.+|+.+... .
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~--Ga~Vv~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALN--DSIVVAVELLEDRLNQIVQELRGMGK-EVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 47788888877663 44555555 89999999999998888888877765 78899999987431 1
Q ss_pred CCccEEEEccc
Q 022810 129 ASYDRIYSIEM 139 (291)
Q Consensus 129 ~~~D~v~~~~~ 139 (291)
++.|+++.+.-
T Consensus 83 G~iDiLVNNAG 93 (254)
T 4fn4_A 83 SRIDVLCNNAG 93 (254)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 67899998764
No 435
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=88.90 E-value=3.8 Score=34.07 Aligned_cols=98 Identities=10% Similarity=0.026 Sum_probs=63.8
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~- 128 (291)
.|+.+|--|++.|. .+..|++. |++|+.+|.+++.++.+.+ +.+. ++..+.+|+.+... .
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~--Ga~V~i~~r~~~~l~~~~~---~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAE--GARVFITGRRKDVLDAAIA---EIGG-GAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH---HHCT-TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH---HcCC-CeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 57788888887663 45555555 8999999999987665543 3343 67788899877421 1
Q ss_pred CCccEEEEccccccc--------cc-----------HHHHHHHHHhccccCeeEEEE
Q 022810 129 ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~--------~~-----------~~~~l~~~~~~L~pgG~l~i~ 166 (291)
++.|+++.+.-.... ++ .-...+.+...|+.+|.++..
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIni 158 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLT 158 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 578999887643221 11 223455566777777876553
No 436
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=88.75 E-value=0.86 Score=45.12 Aligned_cols=73 Identities=14% Similarity=0.065 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCC--EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC---------------
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNC--KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF--------------- 125 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~--~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~--------------- 125 (291)
...+++||-||.|.++.-+.+. |. .+.++|+++.+++..+.|. ++..++..|+.++
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~A--G~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~~di~~~~~~ 611 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQA--GISDTLWAIEMWDPAAQAFRLNN-----PGSTVFTEDCNILLKLVMAGETTNSRGQ 611 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHH--TSEEEEEEECSSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHHHTCSBCTTCC
T ss_pred CCCeEEEeccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhC-----CCCccccccHHHHhhhccchhhhhhhhh
Confidence 4568999999999999999877 65 4779999999776665543 2445566664321
Q ss_pred --ccCCCccEEEEcccccc
Q 022810 126 --EMEASYDRIYSIEMFEH 142 (291)
Q Consensus 126 --~~~~~~D~v~~~~~l~~ 142 (291)
+..+.+|+|+..++-+.
T Consensus 612 ~lp~~~~vDll~GGpPCQ~ 630 (1002)
T 3swr_A 612 RLPQKGDVEMLCGGPPCQG 630 (1002)
T ss_dssp BCCCTTTCSEEEECCCCTT
T ss_pred hcccCCCeeEEEEcCCCcc
Confidence 11246899998775433
No 437
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=88.41 E-value=2.7 Score=34.46 Aligned_cols=102 Identities=12% Similarity=0.078 Sum_probs=60.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCH---HHHHHHHHHHHHhCCCCeEEEEccccCCcc----------
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSK---TQKEFIEEQCRVLELQNVEIIVADISTFEM---------- 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~---~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~---------- 127 (291)
.++++|=.|++.| ++..+++.+ .|.+|+.++.+. +.++.+.+.+...+. ++.++.+|+.+...
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGA-KVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTC-EEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHH
Confidence 4678888877644 455554442 278999987543 334444444443343 68899999987431
Q ss_pred C-CCccEEEEccccccc--------cc-----------HHHHHHHHHhccccCeeEEEE
Q 022810 128 E-ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 ~-~~~D~v~~~~~l~~~--------~~-----------~~~~l~~~~~~L~pgG~l~i~ 166 (291)
. +..|+++.+..+... ++ ...+.+.+...|+++|.+++.
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 146 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI 146 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence 1 478999987653221 11 123455556666777876654
No 438
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=87.95 E-value=3.9 Score=33.35 Aligned_cols=102 Identities=17% Similarity=0.154 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCC-cchHH----HHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---------
Q 022810 62 EDGHTVLDVGCG-WGSLS----LYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--------- 127 (291)
Q Consensus 62 ~~~~~vLDiGcG-~G~~~----~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~--------- 127 (291)
.++++||=.|++ +|.++ ..|++. +.+|+.++.+....+.+++.....+ ++.++.+|+.+...
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~ 87 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEFG--SELVFPCDVADDAQIDALFASLK 87 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHc--CCCEEEEecchhhHHHHHHHHHHcC--CcEEEECCCCCHHHHHHHHHHHH
Confidence 467899999964 23344 444444 8899999988766655555544443 57888999987431
Q ss_pred C--CCccEEEEcccccc-----------c--cc-----------HHHHHHHHHhccccCeeEEEEe
Q 022810 128 E--ASYDRIYSIEMFEH-----------M--KN-----------YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 128 ~--~~~D~v~~~~~l~~-----------~--~~-----------~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
. ++.|+++.+..+.. . .+ ...+++.+...++++|.++...
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 0 47899998764422 1 11 1234555666677777766543
No 439
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=87.74 E-value=5.1 Score=32.79 Aligned_cols=76 Identities=16% Similarity=0.101 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCcc-----C--CCc
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM-----E--ASY 131 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~-~~i~~~~~d~~~~~~-----~--~~~ 131 (291)
.++++|=.|++.|. ++..|++. |.+|+.++.++...+.+.+.+...+. ..+.++.+|+.+... . +..
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 86 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAE--GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV 86 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence 46678877765442 33444444 88999999999877776666655532 357888899876421 1 578
Q ss_pred cEEEEcccc
Q 022810 132 DRIYSIEMF 140 (291)
Q Consensus 132 D~v~~~~~l 140 (291)
|+++.+...
T Consensus 87 d~lv~nAg~ 95 (267)
T 3t4x_A 87 DILINNLGI 95 (267)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999987644
No 440
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=87.41 E-value=2.9 Score=34.41 Aligned_cols=76 Identities=17% Similarity=0.143 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc------------C
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM------------E 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~------------~ 128 (291)
.++++|=.|++. .++..+++.+ .+.+|++++.++..++.+.+.+...+. ++.++.+|+.+... .
T Consensus 20 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGGSK-GIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCcc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 467888888754 4444443321 278999999998877666555554443 68889999876421 0
Q ss_pred CCccEEEEcccc
Q 022810 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~v~~~~~l 140 (291)
+..|+++.+...
T Consensus 98 g~id~lv~nAg~ 109 (273)
T 1ae1_A 98 GKLNILVNNAGV 109 (273)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 468999987644
No 441
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=87.40 E-value=2.5 Score=35.47 Aligned_cols=88 Identities=13% Similarity=0.001 Sum_probs=51.2
Q ss_pred CCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEE-ccccCCccCCCccEEEEccc
Q 022810 62 EDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIV-ADISTFEMEASYDRIYSIEM 139 (291)
Q Consensus 62 ~~~~~vLDiGcG~-G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~-~d~~~~~~~~~~D~v~~~~~ 139 (291)
..+.+|+=+|+|. |......+..+ +.+|+++|.++...+.+ ...+. .... .+..+. -...|+|+..-+
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~~~~~~~----~~~g~---~~~~~~~l~~~--l~~aDvVi~~~p 222 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAAL-GAKVKVGARESDLLARI----AEMGM---EPFHISKAAQE--LRDVDVCINTIP 222 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHH----HHTTS---EEEEGGGHHHH--TTTCSEEEECCS
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHH----HHCCC---eecChhhHHHH--hcCCCEEEECCC
Confidence 3688999999873 44333334344 78999999998754333 23332 3221 122111 156899998776
Q ss_pred ccccccHHHHHHHHHhccccCeeEEE
Q 022810 140 FEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~L~pgG~l~i 165 (291)
.+.+.. ...+.++||++++-
T Consensus 223 ~~~i~~------~~l~~mk~~~~lin 242 (293)
T 3d4o_A 223 ALVVTA------NVLAEMPSHTFVID 242 (293)
T ss_dssp SCCBCH------HHHHHSCTTCEEEE
T ss_pred hHHhCH------HHHHhcCCCCEEEE
Confidence 643321 23346788887543
No 442
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=87.40 E-value=6.1 Score=32.62 Aligned_cols=103 Identities=15% Similarity=0.159 Sum_probs=59.9
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHH-HHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQ-KEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~-~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~- 128 (291)
.++++|=.|++ |.++..+++.+ .|.+|++++.++.. .+.+.+.+...+. ++.++.+|+.+... .
T Consensus 28 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 28 EGKVALVTGAG-RGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCC-CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35677777765 44444444332 27899999877542 3333344444443 68888999876421 0
Q ss_pred CCccEEEEccccccc--------cc-----------HHHHHHHHHhccccCeeEEEEe
Q 022810 129 ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~--------~~-----------~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
+..|+++.+...... ++ ...+++.+.+.|+.+|.++...
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 468999987644221 11 1224455666666677766543
No 443
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=87.35 E-value=0.29 Score=41.97 Aligned_cols=57 Identities=11% Similarity=0.018 Sum_probs=41.5
Q ss_pred CeEEE-EccccCCc--cC-CCccEEEEccccccc-----------ccHHHHHHHHHhccccCeeEEEEeecc
Q 022810 114 NVEII-VADISTFE--ME-ASYDRIYSIEMFEHM-----------KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 114 ~i~~~-~~d~~~~~--~~-~~~D~v~~~~~l~~~-----------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 170 (291)
...++ ++|..+.. .+ +++|+|++.++.... ......+..+.++|+|||.+++.....
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~ 109 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQ 109 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSC
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcc
Confidence 35677 89986532 22 689999999987432 134567788899999999999875543
No 444
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=87.29 E-value=0.43 Score=41.26 Aligned_cols=95 Identities=16% Similarity=0.125 Sum_probs=55.8
Q ss_pred HHcCCCCCCEEEEEcC-C-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------cC
Q 022810 57 ERSRLEDGHTVLDVGC-G-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ME 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~------~~ 128 (291)
+...++++.+||=.|+ | .|..+..+++...+.+|++++ ++...+.++ .|.+. ++. +-.++. .+
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga~~--~~~-~~~~~~~~~~~~~~ 206 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSVTH--LFD-RNADYVQEVKRISA 206 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGSSE--EEE-TTSCHHHHHHHHCT
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCCcE--EEc-CCccHHHHHHHhcC
Confidence 4567789999999998 3 577777888765457899988 444333332 34322 222 111111 12
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
+.+|+|+-.-.- ..+..+.+.|+++|++++..
T Consensus 207 ~g~Dvv~d~~g~-------~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 207 EGVDIVLDCLCG-------DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp TCEEEEEEECC--------------CTTEEEEEEEEEEC
T ss_pred CCceEEEECCCc-------hhHHHHHHHhhcCCEEEEEC
Confidence 468988864321 12366789999999988754
No 445
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=87.29 E-value=6.4 Score=32.51 Aligned_cols=72 Identities=13% Similarity=0.174 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~- 128 (291)
.++++|=.|++.|. ++..|++. |.+|+++|.++...+.+.+.. +. ++.++.+|+.+... .
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADE--GCHVLCADIDGDAADAAATKI---GC-GAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHH---CS-SCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHc---CC-cceEEEecCCCHHHHHHHHHHHHHHc
Confidence 46788888776542 34445544 889999999987665544333 33 68889999987531 0
Q ss_pred CCccEEEEcccc
Q 022810 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~v~~~~~l 140 (291)
+..|+++.+...
T Consensus 102 g~iD~lvnnAg~ 113 (277)
T 3gvc_A 102 GGVDKLVANAGV 113 (277)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999987754
No 446
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=87.26 E-value=4.6 Score=31.70 Aligned_cols=94 Identities=12% Similarity=0.080 Sum_probs=55.2
Q ss_pred CEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC--CCccEEEEcccc
Q 022810 65 HTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME--ASYDRIYSIEMF 140 (291)
Q Consensus 65 ~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~--~~~D~v~~~~~l 140 (291)
++||=.|+ +|.++..+++.+ .+.+|++++-++...... . ..+++++.+|+.+.... ..+|+|+.+...
T Consensus 1 MkilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~-~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADR------L-GATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------T-CTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CEEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccc------c-CCCceEEecccccccHhhcccCCEEEECCcc
Confidence 36777775 455555554432 278999999988643321 1 13689999999875433 678999987755
Q ss_pred ccc----ccHHHHHHHHHhcccc-CeeEEEE
Q 022810 141 EHM----KNYQNLLKKISKWMKE-DTLLFVH 166 (291)
Q Consensus 141 ~~~----~~~~~~l~~~~~~L~p-gG~l~i~ 166 (291)
.+. .........+.+.++. |+.+++.
T Consensus 73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred CCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 311 1122334455555544 4455443
No 447
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=87.21 E-value=6.5 Score=32.03 Aligned_cols=78 Identities=12% Similarity=0.060 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhC-CCCeEEEEccccCCcc----------C-
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLE-LQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~-~~~i~~~~~d~~~~~~----------~- 128 (291)
.+.++|=.|++. .++..+++.+ .+.+|++++.++...+.+.+.+.... ..++.++.+|+.+... .
T Consensus 6 ~~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 6 NGKVALVTGAAQ-GIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-cHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 466888888754 4444433321 28899999998876554444332211 1258889999887421 0
Q ss_pred CCccEEEEccccc
Q 022810 129 ASYDRIYSIEMFE 141 (291)
Q Consensus 129 ~~~D~v~~~~~l~ 141 (291)
+..|+++.+....
T Consensus 85 g~id~lv~~Ag~~ 97 (267)
T 2gdz_A 85 GRLDILVNNAGVN 97 (267)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3679999877543
No 448
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=87.18 E-value=2.6 Score=33.45 Aligned_cols=89 Identities=16% Similarity=0.129 Sum_probs=53.3
Q ss_pred EEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----C-CCccEEEEcc
Q 022810 66 TVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----E-ASYDRIYSIE 138 (291)
Q Consensus 66 ~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----~-~~~D~v~~~~ 138 (291)
+|+=+|+ |..+..+++.. .+..|+++|.+++.++...+ .. .+.++.+|..+... . ..+|+|++..
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~---~~---~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 73 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAK---KL---KATIIHGDGSHKEILRDAEVSKNDVVVILT 73 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---HS---SSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---Hc---CCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence 5677776 45555544432 27899999999987654332 12 46788999877421 1 5789888753
Q ss_pred cccccccHHHHHHHHHhccccCeeEEE
Q 022810 139 MFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 139 ~l~~~~~~~~~l~~~~~~L~pgG~l~i 165 (291)
.- ......+..+.+.+.|...++.
T Consensus 74 ~~---d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 74 PR---DEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp SC---HHHHHHHHHHHHHTSCCCEEEE
T ss_pred CC---cHHHHHHHHHHHHHcCCCeEEE
Confidence 22 1223344455555566666554
No 449
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.18 E-value=3.1 Score=31.88 Aligned_cols=91 Identities=9% Similarity=-0.018 Sum_probs=51.2
Q ss_pred CCEEEEEcCCcchHHHHHHHHC--C-CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc----c-C-CCccEE
Q 022810 64 GHTVLDVGCGWGSLSLYIAQKY--S-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----M-E-ASYDRI 134 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~l~~~~--p-~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~----~-~-~~~D~v 134 (291)
+.+|+=+||| ..+..+++.. . +.+|+++|.+++.++.++ ..+ +.++.+|..+.. . . ..+|+|
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g---~~~~~gd~~~~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEG---RNVISGDATDPDFWERILDTGHVKLV 109 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTT---CCEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCC---CCEEEcCCCCHHHHHhccCCCCCCEE
Confidence 5689999886 3333333321 2 578999999998665543 233 456677765421 1 2 568988
Q ss_pred EEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 135 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 135 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
+....- ......+-...+.+.|++.++..
T Consensus 110 i~~~~~---~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 110 LLAMPH---HQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp EECCSS---HHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EEeCCC---hHHHHHHHHHHHHHCCCCEEEEE
Confidence 874321 11112222344455677776653
No 450
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=87.18 E-value=1.1 Score=37.39 Aligned_cols=53 Identities=15% Similarity=0.063 Sum_probs=34.1
Q ss_pred EccccCCccCCCccEEEEcccc----cc-c--ccHH----HHHHHHHhccccCeeEEEEeeccC
Q 022810 119 VADISTFEMEASYDRIYSIEMF----EH-M--KNYQ----NLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 119 ~~d~~~~~~~~~~D~v~~~~~l----~~-~--~~~~----~~l~~~~~~L~pgG~l~i~~~~~~ 171 (291)
.+|+......+++|+|+++..- ++ - .|.. -+++.+.++|+|||.+++..+...
T Consensus 195 ~lDfg~p~~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygga 258 (320)
T 2hwk_A 195 RLDLGIPGDVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYA 258 (320)
T ss_dssp CGGGCSCTTSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCC
T ss_pred ccccCCccccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 3455443322679999997632 22 1 2322 256667889999999999877554
No 451
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=87.17 E-value=3.4 Score=28.64 Aligned_cols=68 Identities=18% Similarity=0.176 Sum_probs=43.3
Q ss_pred CCEEEEEcCCcchHHHHHHHHC--CC-CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----CCCccEEEE
Q 022810 64 GHTVLDVGCGWGSLSLYIAQKY--SN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----EASYDRIYS 136 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~l~~~~--p~-~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----~~~~D~v~~ 136 (291)
+.+|+=+|+| ..+..+++.+ .+ .+|+++|.++...+.+. .. .+.+...|+.+... -..+|+|+.
T Consensus 5 ~~~v~I~G~G--~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~---~~~~~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 5 RWNICVVGAG--KIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RM---GVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp CEEEEEECCS--HHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TT---TCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred cCeEEEECCC--HHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hC---CCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence 5689999994 4444433321 25 78999999987655443 12 46777888765321 156899988
Q ss_pred cccc
Q 022810 137 IEMF 140 (291)
Q Consensus 137 ~~~l 140 (291)
....
T Consensus 76 ~~~~ 79 (118)
T 3ic5_A 76 AAPF 79 (118)
T ss_dssp CSCG
T ss_pred CCCc
Confidence 7643
No 452
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=86.97 E-value=2.9 Score=40.31 Aligned_cols=45 Identities=13% Similarity=0.028 Sum_probs=34.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC----CCC-EEEEEcCCHHHHHHHHHHH
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY----SNC-KITGICNSKTQKEFIEEQC 107 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~----p~~-~v~~vD~s~~~~~~a~~~~ 107 (291)
...+|+||-||.|+++.-+.+.. ... -+.++|.++.+++.-+.|+
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 45689999999999988887651 012 4679999999877776654
No 453
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=86.89 E-value=3 Score=33.98 Aligned_cols=76 Identities=16% Similarity=0.128 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-----------C-
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~-----------~- 128 (291)
.++++|=.|++ |.++..+++.+ .+.+|++++.++..++.+.+.+...+. ++.++.+|+.+... -
T Consensus 8 ~~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTGGS-RGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46788877765 44444443321 278999999998877665555554443 68889999887421 0
Q ss_pred CCccEEEEcccc
Q 022810 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~v~~~~~l 140 (291)
+..|+++.+...
T Consensus 86 g~id~lv~~Ag~ 97 (260)
T 2ae2_A 86 GKLNILVNNAGI 97 (260)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999987653
No 454
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=86.67 E-value=1.7 Score=37.67 Aligned_cols=94 Identities=13% Similarity=0.086 Sum_probs=59.0
Q ss_pred cCCCCCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcccc------CCccCCCc
Q 022810 59 SRLEDGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIS------TFEMEASY 131 (291)
Q Consensus 59 ~~~~~~~~vLDiGcG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~------~~~~~~~~ 131 (291)
..++++.+||-+|+| .|..+..+++..++++|+++|.+++.++.++ +.|.+. ++...-. +......+
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~--vi~~~~~~~~~v~~~~~g~g~ 255 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RLGADH--VVDARRDPVKQVMELTRGRGV 255 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HTTCSE--EEETTSCHHHHHHHHTTTCCE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH----HhCCCE--EEeccchHHHHHHHHhCCCCC
Confidence 678899999999986 4566777777654679999999998776664 345422 2211101 11111368
Q ss_pred cEEEEcccccccccHHH--HHHHHHhccccCeeEEEE
Q 022810 132 DRIYSIEMFEHMKNYQN--LLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 132 D~v~~~~~l~~~~~~~~--~l~~~~~~L~pgG~l~i~ 166 (291)
|+|+-...- .. .+....+. ++|+++..
T Consensus 256 Dvvid~~G~------~~~~~~~~~~~~--~~G~~v~~ 284 (359)
T 1h2b_A 256 NVAMDFVGS------QATVDYTPYLLG--RMGRLIIV 284 (359)
T ss_dssp EEEEESSCC------HHHHHHGGGGEE--EEEEEEEC
T ss_pred cEEEECCCC------chHHHHHHHhhc--CCCEEEEE
Confidence 998864321 22 45555565 99987764
No 455
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=86.52 E-value=9.4 Score=31.73 Aligned_cols=91 Identities=18% Similarity=0.217 Sum_probs=52.9
Q ss_pred CEEEEEcCCc-c-hHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEE------EEc---cccCCccC-CCcc
Q 022810 65 HTVLDVGCGW-G-SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEI------IVA---DISTFEME-ASYD 132 (291)
Q Consensus 65 ~~vLDiGcG~-G-~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~------~~~---d~~~~~~~-~~~D 132 (291)
++|.=||+|. | .++..+++. +.+|+++|.+++.++.+++ .+. .+.. ... +..+.... ..+|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~----~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 76 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRK----NGL-IADFNGEEVVANLPIFSPEEIDHQNEQVD 76 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----HCE-EEEETTEEEEECCCEECGGGCCTTSCCCS
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHh----CCE-EEEeCCCeeEecceeecchhhcccCCCCC
Confidence 5799999974 3 234445544 7799999999886655443 232 1110 000 11111100 2689
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEE
Q 022810 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 133 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 165 (291)
+|+..-.-. ....+++.+...++|+..++.
T Consensus 77 ~vi~~v~~~---~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 77 LIIALTKAQ---QLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp EEEECSCHH---HHHHHHHHHGGGCCTTCEEEE
T ss_pred EEEEEeccc---cHHHHHHHHHHhcCCCCEEEE
Confidence 988765432 346778888888888776544
No 456
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.52 E-value=3.8 Score=33.55 Aligned_cols=74 Identities=14% Similarity=0.073 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~- 128 (291)
.++++|=.|++.|. ++..|++. +.+|+.++.++..++.+.+.+...+. ++.++.+|+.+... .
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQ--GADLVLAARTVERLEDVAKQVTDTGR-RALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 57789988886552 44455554 88999999999888777777666554 78999999987431 0
Q ss_pred CCccEEEEccc
Q 022810 129 ASYDRIYSIEM 139 (291)
Q Consensus 129 ~~~D~v~~~~~ 139 (291)
++.|+++.+..
T Consensus 87 g~id~lv~nAg 97 (264)
T 3ucx_A 87 GRVDVVINNAF 97 (264)
T ss_dssp SCCSEEEECCC
T ss_pred CCCcEEEECCC
Confidence 47899998763
No 457
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=86.35 E-value=5 Score=31.96 Aligned_cols=71 Identities=20% Similarity=0.237 Sum_probs=46.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCe-EEEEccccCCccC--CCccEEEEc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNV-EIIVADISTFEME--ASYDRIYSI 137 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i-~~~~~d~~~~~~~--~~~D~v~~~ 137 (291)
.+++||=.|+. |.++..+++.+ .+.+|++++.++...+... .. ++ .++.+|+.+.... +..|+|+.+
T Consensus 20 ~~~~ilVtGat-G~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~~---~~~~~~~~Dl~~~~~~~~~~~D~vi~~ 91 (236)
T 3e8x_A 20 QGMRVLVVGAN-GKVARYLLSELKNKGHEPVAMVRNEEQGPELR----ER---GASDIVVANLEEDFSHAFASIDAVVFA 91 (236)
T ss_dssp -CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----HT---TCSEEEECCTTSCCGGGGTTCSEEEEC
T ss_pred CCCeEEEECCC-ChHHHHHHHHHHhCCCeEEEEECChHHHHHHH----hC---CCceEEEcccHHHHHHHHcCCCEEEEC
Confidence 47899988863 55544444332 2789999999887544332 11 57 8899999722111 678999987
Q ss_pred cccc
Q 022810 138 EMFE 141 (291)
Q Consensus 138 ~~l~ 141 (291)
....
T Consensus 92 ag~~ 95 (236)
T 3e8x_A 92 AGSG 95 (236)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7553
No 458
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=86.16 E-value=15 Score=31.39 Aligned_cols=104 Identities=12% Similarity=0.082 Sum_probs=68.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHh-----------------------CCCCeEEE
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVL-----------------------ELQNVEII 118 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~-~p~~~v~~vD~s~~~~~~a~~~~~~~-----------------------~~~~i~~~ 118 (291)
+...|+-||||.=.....+... .++..++=||. |+.++.=++.+... .-++..++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 4679999999988877777654 24678888888 55555433333321 02467889
Q ss_pred EccccCCc----------cC-CCccEEEEccccccc--ccHHHHHHHHHhccccCeeEEEEee
Q 022810 119 VADISTFE----------ME-ASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 119 ~~d~~~~~----------~~-~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~ 168 (291)
.+|+.+.. .. ...-++++-.++.++ +....+++.+.+... +|.+++..+
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~-~~~~i~yE~ 230 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFE-RAMFINYEQ 230 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCS-SEEEEEEEE
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCC-CceEEEEec
Confidence 99987631 12 345688888899888 356778888887664 555444343
No 459
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=86.10 E-value=4.9 Score=33.32 Aligned_cols=84 Identities=13% Similarity=0.186 Sum_probs=51.9
Q ss_pred CEEEEEcC-Cc-ch-HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccccc
Q 022810 65 HTVLDVGC-GW-GS-LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFE 141 (291)
Q Consensus 65 ~~vLDiGc-G~-G~-~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~l~ 141 (291)
++|.=||+ |. |. ++..+++. +.+|+++|.+++.++.+.+ .++ .. .+..+. ....|+|+..-.-.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~----~g~---~~--~~~~~~--~~~aDvVi~av~~~ 78 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQG----MGI---PL--TDGDGW--IDEADVVVLALPDN 78 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHH----TTC---CC--CCSSGG--GGTCSEEEECSCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHh----cCC---Cc--CCHHHH--hcCCCEEEEcCCch
Confidence 48999999 74 33 44445544 6799999999886655443 333 11 122111 14689998765432
Q ss_pred ccccHHHHHHHHHhccccCeeEE
Q 022810 142 HMKNYQNLLKKISKWMKEDTLLF 164 (291)
Q Consensus 142 ~~~~~~~~l~~~~~~L~pgG~l~ 164 (291)
. ...+++.+...++|+..++
T Consensus 79 ~---~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 79 I---IEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp H---HHHHHHHHGGGSCTTCEEE
T ss_pred H---HHHHHHHHHHhCCCCCEEE
Confidence 2 4667777877787776543
No 460
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=86.08 E-value=2.4 Score=34.51 Aligned_cols=75 Identities=9% Similarity=-0.083 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC----------C
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----------A 129 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~----------~ 129 (291)
.+.++|=.|++.|. ++..|++. |.+|++++.++..++.+.+.+...+. ++.++.+|+.+...- +
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAE--GFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 46788888877552 34444544 88999999999888777777766654 789999999874311 3
Q ss_pred CccEEEEcccc
Q 022810 130 SYDRIYSIEMF 140 (291)
Q Consensus 130 ~~D~v~~~~~l 140 (291)
..|+++.+...
T Consensus 83 ~id~lv~nAg~ 93 (252)
T 3h7a_A 83 PLEVTIFNVGA 93 (252)
T ss_dssp CEEEEEECCCC
T ss_pred CceEEEECCCc
Confidence 68999987654
No 461
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.91 E-value=3.5 Score=34.66 Aligned_cols=88 Identities=14% Similarity=0.055 Sum_probs=51.7
Q ss_pred CCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEE-ccccCCccCCCccEEEEccc
Q 022810 62 EDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIV-ADISTFEMEASYDRIYSIEM 139 (291)
Q Consensus 62 ~~~~~vLDiGcG~-G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~-~d~~~~~~~~~~D~v~~~~~ 139 (291)
..+.+|+=||+|. |......+..+ +.+|+++|.++...+.+. ..+. .... .+..+. -...|+|+..-+
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~----~~g~---~~~~~~~l~~~--l~~aDvVi~~~p 224 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAAL-GANVKVGARSSAHLARIT----EMGL---VPFHTDELKEH--VKDIDICINTIP 224 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH----HTTC---EEEEGGGHHHH--STTCSEEEECCS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHH----HCCC---eEEchhhHHHH--hhCCCEEEECCC
Confidence 3688999999873 43333333344 789999999986443322 2332 3221 222221 156899998877
Q ss_pred ccccccHHHHHHHHHhccccCeeEEE
Q 022810 140 FEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~L~pgG~l~i 165 (291)
.+.+. . ...+.++||++++-
T Consensus 225 ~~~i~-~-----~~~~~mk~g~~lin 244 (300)
T 2rir_A 225 SMILN-Q-----TVLSSMTPKTLILD 244 (300)
T ss_dssp SCCBC-H-----HHHTTSCTTCEEEE
T ss_pred hhhhC-H-----HHHHhCCCCCEEEE
Confidence 64332 1 24467889886543
No 462
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=85.90 E-value=6.4 Score=32.57 Aligned_cols=75 Identities=7% Similarity=0.065 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCH-HHHHHHHHHHH-HhCCCCeEEEEccccC----Ccc------
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSK-TQKEFIEEQCR-VLELQNVEIIVADIST----FEM------ 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~-~~~~~a~~~~~-~~~~~~i~~~~~d~~~----~~~------ 127 (291)
.++++|=.|++.|. ++..|++. +.+|++++.++ ...+.+.+.+. ..+ .++.++.+|+.+ ...
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~v~~~~~ 98 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQT--GYRVVIHYHNSAEAAVSLADELNKERS-NTAVVCQADLTNSNVLPASCEEIIN 98 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHH--TCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhhcC-CceEEEEeecCCccCCHHHHHHHHH
Confidence 46678877776442 34445555 78999999887 65555544443 333 368899999987 320
Q ss_pred ----C-CCccEEEEcccc
Q 022810 128 ----E-ASYDRIYSIEMF 140 (291)
Q Consensus 128 ----~-~~~D~v~~~~~l 140 (291)
. +..|+++.+..+
T Consensus 99 ~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 99 SCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHhcCCCCEEEECCCC
Confidence 0 378999987643
No 463
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=85.81 E-value=3.6 Score=33.29 Aligned_cols=75 Identities=15% Similarity=0.102 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~- 128 (291)
.+.++|=.|++.|. ++..|++. +.+|+.++.++...+.+.+.....+. ++.++.+|+.+... .
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALARE--GAAVVVADINAEAAEAVAKQIVADGG-TAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46788888876442 34444444 88999999999888777776665543 68899999987431 0
Q ss_pred CCccEEEEcccc
Q 022810 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~v~~~~~l 140 (291)
+..|+++.+..+
T Consensus 85 g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 GGIDYLVNNAAI 96 (253)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 378999987654
No 464
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=85.75 E-value=5.4 Score=31.74 Aligned_cols=75 Identities=15% Similarity=0.047 Sum_probs=49.9
Q ss_pred CCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHH-HhCCCCeEEEEccccCCcc-----C------C
Q 022810 64 GHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCR-VLELQNVEIIVADISTFEM-----E------A 129 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~-~~~~~~i~~~~~d~~~~~~-----~------~ 129 (291)
++++|=.|++. .++..+++.+ .+.+|+.++.++..++.+.+... ..+. ++.++.+|+.+... . +
T Consensus 2 ~k~vlITGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGASR-GIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV-EVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-eEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 45677777654 4444443332 27899999999887776665554 3343 78899999987431 1 3
Q ss_pred CccEEEEcccc
Q 022810 130 SYDRIYSIEMF 140 (291)
Q Consensus 130 ~~D~v~~~~~l 140 (291)
..|+++.+..+
T Consensus 80 ~id~li~~Ag~ 90 (235)
T 3l77_A 80 DVDVVVANAGL 90 (235)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 78999987754
No 465
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=85.56 E-value=1.6 Score=37.49 Aligned_cols=91 Identities=11% Similarity=0.129 Sum_probs=55.8
Q ss_pred CCC-CEEEEE-cCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc------C-CCc
Q 022810 62 EDG-HTVLDV-GCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM------E-ASY 131 (291)
Q Consensus 62 ~~~-~~vLDi-GcG-~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~------~-~~~ 131 (291)
.++ .+||=. |+| .|..+..+++.. +++|++++.+++.++.+++ .|.+ .++..+-.++.. . ..+
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----~Ga~--~~~~~~~~~~~~~v~~~~~~~g~ 234 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEE-GFRPIVTVRRDEQIALLKD----IGAA--HVLNEKAPDFEATLREVMKAEQP 234 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHH----HTCS--EEEETTSTTHHHHHHHHHHHHCC
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCC--EEEECCcHHHHHHHHHHhcCCCC
Confidence 345 566654 443 566777777765 7899999999988777653 3442 122221111110 1 368
Q ss_pred cEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 132 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 132 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
|+|+-...- ..+..+.+.|+++|.+++.
T Consensus 235 D~vid~~g~-------~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 235 RIFLDAVTG-------PLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp CEEEESSCH-------HHHHHHHHHSCTTCEEEEC
T ss_pred cEEEECCCC-------hhHHHHHhhhcCCCEEEEE
Confidence 998865332 2346778899999998774
No 466
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=85.52 E-value=3.1 Score=29.30 Aligned_cols=77 Identities=17% Similarity=0.128 Sum_probs=44.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEccccc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMFE 141 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~~~l~ 141 (291)
+..+||=+ |+.|..+..++++ .++.+++.|+ .+........+.... ..||+|++.+=+.
T Consensus 5 ~~mkIlL~-C~aGmSTsllv~k------------------m~~~a~~~gi-~v~i~a~~~~~~~~~~~~~DvvLLgPQV~ 64 (108)
T 3nbm_A 5 KELKVLVL-CAGSGTSAQLANA------------------INEGANLTEV-RVIANSGAYGAHYDIMGVYDLIILAPQVR 64 (108)
T ss_dssp CCEEEEEE-ESSSSHHHHHHHH------------------HHHHHHHHTC-SEEEEEEETTSCTTTGGGCSEEEECGGGG
T ss_pred cCceEEEE-CCCCCCHHHHHHH------------------HHHHHHHCCC-ceEEEEcchHHHHhhccCCCEEEEChHHH
Confidence 45677755 6666666667765 4455556676 466554444443322 6799999976443
Q ss_pred ccccHHHHHHHHHhccccCeeEEE
Q 022810 142 HMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 142 ~~~~~~~~l~~~~~~L~pgG~l~i 165 (291)
+ .+.++.+...+.|+-+.
T Consensus 65 y------~~~~ik~~~~~~~ipV~ 82 (108)
T 3nbm_A 65 S------YYREMKVDAERLGIQIV 82 (108)
T ss_dssp G------GHHHHHHHHTTTTCEEE
T ss_pred H------HHHHHHHHhhhcCCcEE
Confidence 3 34555555556565433
No 467
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.51 E-value=6.5 Score=30.63 Aligned_cols=67 Identities=12% Similarity=0.161 Sum_probs=43.7
Q ss_pred CEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC--CCccEEEEcccc
Q 022810 65 HTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME--ASYDRIYSIEMF 140 (291)
Q Consensus 65 ~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~--~~~D~v~~~~~l 140 (291)
++||=.|+ +|.++..+++.+ .+.+|++++-++...+.. . ++++++.+|+.+.... ..+|+|+.+...
T Consensus 1 MkvlVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIGA-TGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-------H-KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH-------C-SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred CeEEEEcC-CchhHHHHHHHHHhCCCEEEEEEcCchhhhhc-------c-CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 36777775 355444444332 278999999887643221 1 3789999999875433 678999987654
No 468
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=85.44 E-value=4 Score=33.23 Aligned_cols=75 Identities=7% Similarity=-0.024 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~- 128 (291)
.++++|=.|++.|. ++..|++. |.+|+.++.++...+.+.+.+...+. ++.++.+|+.+... .
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKA--GASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788888776552 44555555 88999999999887777776666554 78899999987431 0
Q ss_pred CCccEEEEcccc
Q 022810 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~v~~~~~l 140 (291)
+..|+++.+...
T Consensus 88 g~id~lv~nAg~ 99 (256)
T 3gaf_A 88 GKITVLVNNAGG 99 (256)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999987644
No 469
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=85.21 E-value=5.7 Score=32.66 Aligned_cols=84 Identities=17% Similarity=0.192 Sum_probs=51.7
Q ss_pred EEEEEcCCc-ch-HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccccccc
Q 022810 66 TVLDVGCGW-GS-LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFEHM 143 (291)
Q Consensus 66 ~vLDiGcG~-G~-~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~l~~~ 143 (291)
+|.=||||. |. ++..+++. +.+|+++|.+++.++.+. +.+.. .. ...|..+. ...|+|+..-.-.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~----~~g~~-~~-~~~~~~~~---~~~D~vi~av~~~-- 68 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAV----ERQLV-DE-AGQDLSLL---QTAKIIFLCTPIQ-- 68 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHH----HTTSC-SE-EESCGGGG---TTCSEEEECSCHH--
T ss_pred EEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHH----hCCCC-cc-ccCCHHHh---CCCCEEEEECCHH--
Confidence 678899874 32 34444443 679999999988665543 33431 11 23344333 4679988765432
Q ss_pred ccHHHHHHHHHhccccCeeE
Q 022810 144 KNYQNLLKKISKWMKEDTLL 163 (291)
Q Consensus 144 ~~~~~~l~~~~~~L~pgG~l 163 (291)
....+++.+...++|+..+
T Consensus 69 -~~~~~~~~l~~~~~~~~~v 87 (279)
T 2f1k_A 69 -LILPTLEKLIPHLSPTAIV 87 (279)
T ss_dssp -HHHHHHHHHGGGSCTTCEE
T ss_pred -HHHHHHHHHHhhCCCCCEE
Confidence 3456778888888887654
No 470
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=85.17 E-value=5.5 Score=32.39 Aligned_cols=72 Identities=10% Similarity=0.116 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---------C--
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------E-- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~---------~-- 128 (291)
.++++|=.|++.|. ++..|+++ +.+|+.+|.++...+...+.. + .++.++.+|+.+... .
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVRE--GATVAIADIDIERARQAAAEI---G-PAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh---C-CCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 46788888876442 34444444 889999999887655444332 3 268889999987431 0
Q ss_pred CCccEEEEcccc
Q 022810 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~v~~~~~l 140 (291)
+..|+++.+...
T Consensus 81 g~id~lv~~Ag~ 92 (259)
T 4e6p_A 81 GGLDILVNNAAL 92 (259)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 378999987654
No 471
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=85.06 E-value=2.5 Score=36.68 Aligned_cols=88 Identities=8% Similarity=0.107 Sum_probs=53.5
Q ss_pred CCEEEEEcCCc-c-hHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccc
Q 022810 64 GHTVLDVGCGW-G-SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 140 (291)
Q Consensus 64 ~~~vLDiGcG~-G-~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-~~~D~v~~~~~l 140 (291)
.++|.=||+|. | .++..|++. +.+|+++|.+++.++.+. +.+. . ...+..+.... ...|+|+..-+-
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~--G~~V~v~dr~~~~~~~l~----~~g~---~-~~~s~~e~~~~a~~~DvVi~~vp~ 91 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG--GHECVVYDLNVNAVQALE----REGI---A-GARSIEEFCAKLVKPRVVWLMVPA 91 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHH----TTTC---B-CCSSHHHHHHHSCSSCEEEECSCG
T ss_pred CCEEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHH----HCCC---E-EeCCHHHHHhcCCCCCEEEEeCCH
Confidence 57899999883 3 244555554 789999999998655443 2232 1 11222222111 345988876544
Q ss_pred cccccHHHHHHHHHhccccCeeEE
Q 022810 141 EHMKNYQNLLKKISKWMKEDTLLF 164 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~L~pgG~l~ 164 (291)
. ....++..+...|++|.+++
T Consensus 92 ~---~v~~vl~~l~~~l~~g~iiI 112 (358)
T 4e21_A 92 A---VVDSMLQRMTPLLAANDIVI 112 (358)
T ss_dssp G---GHHHHHHHHGGGCCTTCEEE
T ss_pred H---HHHHHHHHHHhhCCCCCEEE
Confidence 3 45667788888888776544
No 472
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=84.94 E-value=12 Score=33.62 Aligned_cols=95 Identities=13% Similarity=0.167 Sum_probs=58.5
Q ss_pred CCEEEEEcCCc-c-hHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH-------hC------CC--CeEEEEccccCCc
Q 022810 64 GHTVLDVGCGW-G-SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV-------LE------LQ--NVEIIVADISTFE 126 (291)
Q Consensus 64 ~~~vLDiGcG~-G-~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~-------~~------~~--~i~~~~~d~~~~~ 126 (291)
-.+|.-||+|. | .++..+++. +.+|+++|.+++.++.+++.... .+ .+ ...+ ..|...
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~--G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~-- 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE-- 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG--
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH--
Confidence 35799999986 3 344455544 78999999999988877653321 11 00 1222 344322
Q ss_pred cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEE
Q 022810 127 MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 127 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 165 (291)
-...|+|+..-+ ....-...+++++...++|+.+++.
T Consensus 112 -~~~aDlVIeaVp-e~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 112 -LSTVDLVVEAVF-EDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp -GTTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -HCCCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 156798887543 2222236688888888888876654
No 473
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=84.69 E-value=5.6 Score=32.97 Aligned_cols=75 Identities=15% Similarity=0.093 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHH-------HHHHHHHHHHHhCCCCeEEEEccccCCcc-----
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKT-------QKEFIEEQCRVLELQNVEIIVADISTFEM----- 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~-------~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----- 127 (291)
.++++|=.|++.|. ++..|++. +.+|++++.++. .++.+.+.....+. ++.++.+|+.+...
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~ 84 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAAD--GANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG-QALPIVGDIRDGDAVAAAV 84 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTS-EEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECChhhhhhhhHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHH
Confidence 46788888876552 34444444 789999998765 34444444445444 78899999987431
Q ss_pred -----C-CCccEEEEcccc
Q 022810 128 -----E-ASYDRIYSIEMF 140 (291)
Q Consensus 128 -----~-~~~D~v~~~~~l 140 (291)
. +..|+++.+..+
T Consensus 85 ~~~~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASA 103 (285)
T ss_dssp HHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 0 478999987654
No 474
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.66 E-value=1.4 Score=39.82 Aligned_cols=66 Identities=12% Similarity=0.238 Sum_probs=46.6
Q ss_pred CCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----C-CCccEEEE
Q 022810 64 GHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----E-ASYDRIYS 136 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----~-~~~D~v~~ 136 (291)
.++|+=+||| ..+..+++.. .+..|+.+|.+++.++.+.+.+ .+..+.+|..+... . +..|++++
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~------~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY------DLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS------SCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred cCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc------CcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 4678877775 5666666654 2678999999999876655432 46788999987531 2 67898887
Q ss_pred c
Q 022810 137 I 137 (291)
Q Consensus 137 ~ 137 (291)
.
T Consensus 75 ~ 75 (461)
T 4g65_A 75 V 75 (461)
T ss_dssp C
T ss_pred E
Confidence 3
No 475
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=84.43 E-value=5.5 Score=33.74 Aligned_cols=91 Identities=18% Similarity=0.142 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCc-c-hHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC----CCeEEE-----EccccCCccCCCc
Q 022810 63 DGHTVLDVGCGW-G-SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL----QNVEII-----VADISTFEMEASY 131 (291)
Q Consensus 63 ~~~~vLDiGcG~-G-~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~----~~i~~~-----~~d~~~~~~~~~~ 131 (291)
...+|.=||+|. | .++..|++. +.+|+.+ .+++.++..++ .++ ....+. ..|... ...+
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~--G~~V~l~-~~~~~~~~i~~----~g~~~~~~~~~~~~~~~~~~~~~~---~~~~ 87 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA--GHEVILI-ARPQHVQAIEA----TGLRLETQSFDEQVKVSASSDPSA---VQGA 87 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT--TCEEEEE-CCHHHHHHHHH----HCEEEECSSCEEEECCEEESCGGG---GTTC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC--CCeEEEE-EcHhHHHHHHh----CCeEEEcCCCcEEEeeeeeCCHHH---cCCC
Confidence 356899999983 3 345555554 7799999 88876665543 232 011110 112211 1568
Q ss_pred cEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 132 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 132 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
|+|+..-.-. +...+++.+...++|+..++..
T Consensus 88 D~vilavk~~---~~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 88 DLVLFCVKST---DTQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp SEEEECCCGG---GHHHHHHHHTTTSCTTCEEEEE
T ss_pred CEEEEEcccc---cHHHHHHHHHHhcCCCCEEEEe
Confidence 9988765443 4577888898899888766554
No 476
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=84.19 E-value=4.2 Score=32.71 Aligned_cols=75 Identities=20% Similarity=0.256 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~- 128 (291)
.++++|=.|++.|. ++..|++. +.+|++++.++...+...+.....+. ++.++.+|+.+... .
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASK--GATVVGTATSQASAEKFENSMKEKGF-KARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 35678877765442 34444444 88999999999888777777766654 78999999987431 1
Q ss_pred CCccEEEEcccc
Q 022810 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~v~~~~~l 140 (291)
++.|+++.+...
T Consensus 81 ~~id~li~~Ag~ 92 (247)
T 3lyl_A 81 LAIDILVNNAGI 92 (247)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999987654
No 477
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=84.15 E-value=3.7 Score=33.49 Aligned_cols=76 Identities=13% Similarity=0.133 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-C
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E-A 129 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~-~ 129 (291)
.+.+||=.|++ |.++..+++.+ .|.+|++++.++..++.+.+.+...+. ++.++.+|+.+... . +
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 56788888765 44444444332 288999999999888777777666554 78899999987431 0 4
Q ss_pred CccEEEEcccc
Q 022810 130 SYDRIYSIEMF 140 (291)
Q Consensus 130 ~~D~v~~~~~l 140 (291)
+.|+++.+...
T Consensus 106 ~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 RCDVLVNNAGV 116 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999987654
No 478
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=84.04 E-value=9.1 Score=31.23 Aligned_cols=73 Identities=16% Similarity=0.202 Sum_probs=46.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-C
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E-A 129 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~-~ 129 (291)
.++++|=.|++.| ++..+++.+ .+.+|++++.++..++.+.+ ..+ .++.++.+|+.+... . +
T Consensus 5 ~~k~vlITGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (263)
T 2a4k_A 5 SGKTILVTGAASG-IGRAALDLFAREGASLVAVDREERLLAEAVA---ALE-AEAIAVVADVSDPKAVEAVFAEALEEFG 79 (263)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---TCC-SSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---Hhc-CceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4567888877544 444443321 27899999998875543322 222 368889999887431 0 3
Q ss_pred CccEEEEcccc
Q 022810 130 SYDRIYSIEMF 140 (291)
Q Consensus 130 ~~D~v~~~~~l 140 (291)
+.|+++.+...
T Consensus 80 ~iD~lvnnAg~ 90 (263)
T 2a4k_A 80 RLHGVAHFAGV 90 (263)
T ss_dssp CCCEEEEGGGG
T ss_pred CCcEEEECCCC
Confidence 67999987754
No 479
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=83.99 E-value=1.7 Score=37.76 Aligned_cols=66 Identities=17% Similarity=0.151 Sum_probs=41.5
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---C-CCccEEEEc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---E-ASYDRIYSI 137 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~-p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~---~-~~~D~v~~~ 137 (291)
..++||=|||| ..+..+++.. ...+|+.+|.+...++.+++ .+..+..|+.+... . ...|+|++.
T Consensus 15 ~~mkilvlGaG--~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~--------~~~~~~~d~~d~~~l~~~~~~~DvVi~~ 84 (365)
T 3abi_A 15 RHMKVLILGAG--NIGRAIAWDLKDEFDVYIGDVNNENLEKVKE--------FATPLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp -CCEEEEECCS--HHHHHHHHHHTTTSEEEEEESCHHHHHHHTT--------TSEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CccEEEEECCC--HHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc--------cCCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence 45789999995 3443333322 25689999999876654432 35566778766421 1 678999875
Q ss_pred c
Q 022810 138 E 138 (291)
Q Consensus 138 ~ 138 (291)
.
T Consensus 85 ~ 85 (365)
T 3abi_A 85 L 85 (365)
T ss_dssp C
T ss_pred c
Confidence 4
No 480
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=83.98 E-value=6.3 Score=33.66 Aligned_cols=91 Identities=16% Similarity=0.239 Sum_probs=53.3
Q ss_pred CEEEEEcCCc-ch-HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC----CeE------EEEccccCCccCCCcc
Q 022810 65 HTVLDVGCGW-GS-LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ----NVE------IIVADISTFEMEASYD 132 (291)
Q Consensus 65 ~~vLDiGcG~-G~-~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~----~i~------~~~~d~~~~~~~~~~D 132 (291)
++|.=||+|. |. ++..+++. +.+|+++|.+++.++.+++.. ++. ... ....|..+. ...+|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~D 77 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRG---AIIAEGPGLAGTAHPDLLTSDIGLA--VKDAD 77 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHT---SEEEESSSCCEEECCSEEESCHHHH--HTTCS
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcC---CeEEeccccccccccceecCCHHHH--HhcCC
Confidence 5899999984 32 34445543 789999999988765544321 110 000 011121110 14689
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEE
Q 022810 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 133 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 165 (291)
+|+..-.-. ....+++.+...++++..++.
T Consensus 78 ~vi~~v~~~---~~~~~~~~l~~~l~~~~~vv~ 107 (359)
T 1bg6_A 78 VILIVVPAI---HHASIAANIASYISEGQLIIL 107 (359)
T ss_dssp EEEECSCGG---GHHHHHHHHGGGCCTTCEEEE
T ss_pred EEEEeCCch---HHHHHHHHHHHhCCCCCEEEE
Confidence 888765443 236778888888888775544
No 481
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=83.90 E-value=3 Score=33.67 Aligned_cols=76 Identities=12% Similarity=0.054 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-----------C
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-----------A 129 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-----------~ 129 (291)
.+++||=.|+ +|.++..+++.+ .+.+|++++.++...+...+.+...+. ++.++.+|+.+...- +
T Consensus 10 ~~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 10 DGKCAIITGA-GAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 3567877765 466555555432 378999999998876665555554443 688889998764210 3
Q ss_pred CccEEEEcccc
Q 022810 130 SYDRIYSIEMF 140 (291)
Q Consensus 130 ~~D~v~~~~~l 140 (291)
.+|+|+.+...
T Consensus 88 ~~d~vi~~Ag~ 98 (255)
T 1fmc_A 88 KVDILVNNAGG 98 (255)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999987643
No 482
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=83.74 E-value=4.3 Score=33.54 Aligned_cols=75 Identities=11% Similarity=0.096 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~- 128 (291)
.++++|=.|++.|. ++..|++. |.+|++++.++..++.+.+.+...+. ++.++.+|+.+... .
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAAR--GIAVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788888876542 34445544 88999999999887777666665554 78999999987431 1
Q ss_pred CCccEEEEcccc
Q 022810 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~v~~~~~l 140 (291)
++.|+++.+...
T Consensus 100 g~id~lv~nAg~ 111 (279)
T 3sju_A 100 GPIGILVNSAGR 111 (279)
T ss_dssp CSCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 478999987654
No 483
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=83.57 E-value=4 Score=33.39 Aligned_cols=77 Identities=16% Similarity=0.113 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-C
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E-A 129 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~-~ 129 (291)
.++++|=.|++. .++..+++.+ .+.+|+.++.++..++.+.+.....+..++.++.+|+.+... . +
T Consensus 9 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 9 QGRSVVVTGGTK-GIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 466788777654 4444443322 278999999999887777666665543478999999987431 0 4
Q ss_pred CccEEEEcccc
Q 022810 130 SYDRIYSIEMF 140 (291)
Q Consensus 130 ~~D~v~~~~~l 140 (291)
..|+++.+...
T Consensus 88 ~id~lvnnAg~ 98 (262)
T 3pk0_A 88 GIDVVCANAGV 98 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999987654
No 484
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=83.38 E-value=4.6 Score=32.85 Aligned_cols=76 Identities=14% Similarity=0.038 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc------------C
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM------------E 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~------------~ 128 (291)
.+++||=.|++ |.++..+++.+ .+.+|++++.++..++...+.+...+. ++.++.+|+.+... .
T Consensus 13 ~~k~vlITGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 13 KAKTVLVTGGT-KGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 35678877664 55555544432 278999999998776665555554443 68889999876421 0
Q ss_pred CCccEEEEcccc
Q 022810 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~v~~~~~l 140 (291)
+..|+|+.+...
T Consensus 91 ~~id~li~~Ag~ 102 (266)
T 1xq1_A 91 GKLDILINNLGA 102 (266)
T ss_dssp TCCSEEEEECCC
T ss_pred CCCcEEEECCCC
Confidence 467999877643
No 485
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=83.19 E-value=5.3 Score=32.22 Aligned_cols=102 Identities=11% Similarity=0.069 Sum_probs=59.6
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEE-cCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC----------
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGI-CNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME---------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~v-D~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~---------- 128 (291)
.++++|=.|++.|. ++..|++. +.+|+.+ ..+....+...+.....+. ++.++.+|+.+....
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRKEEAEETVYEIQSNGG-SAFSIGANLESLHGVEALYSSLDNE 82 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCSHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhcCC-ceEEEecCcCCHHHHHHHHHHHHHH
Confidence 46788877776542 34444444 7888775 5555555555555555443 688888998774310
Q ss_pred -------CCccEEEEccccccc--------cc-----------HHHHHHHHHhccccCeeEEEEe
Q 022810 129 -------ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 -------~~~D~v~~~~~l~~~--------~~-----------~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
.+.|+++.+..+... ++ ...+++.+...|+++|.++...
T Consensus 83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~is 147 (255)
T 3icc_A 83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINIS 147 (255)
T ss_dssp HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeC
Confidence 138999987644221 11 1224455556666778766543
No 486
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=83.08 E-value=4.3 Score=33.35 Aligned_cols=74 Identities=15% Similarity=0.069 Sum_probs=51.9
Q ss_pred CCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-C
Q 022810 64 GHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E-A 129 (291)
Q Consensus 64 ~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~-~ 129 (291)
++++|=.|++.|. ++..|++. |.+|+.++.++..++.+.+.+...+. ++.++.+|+.+... . +
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVA--GAKILLGARRQARIEAIATEIRDAGG-TALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5677877776442 33444444 88999999999888777777666554 68888999887421 1 4
Q ss_pred CccEEEEcccc
Q 022810 130 SYDRIYSIEMF 140 (291)
Q Consensus 130 ~~D~v~~~~~l 140 (291)
..|+++.+..+
T Consensus 81 ~iD~lVnnAG~ 91 (264)
T 3tfo_A 81 RIDVLVNNAGV 91 (264)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999987644
No 487
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=82.97 E-value=6.1 Score=31.87 Aligned_cols=76 Identities=13% Similarity=0.121 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-----------C
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-----------A 129 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~-----------~ 129 (291)
.+.+||=.|++ |.++..+++.+ .+.+|++++.++...+...+.+...+. ++.++.+|+.+...- +
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH-DVSSVVMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46788888765 44444444332 278999999998776655555554443 688999998874310 3
Q ss_pred CccEEEEcccc
Q 022810 130 SYDRIYSIEMF 140 (291)
Q Consensus 130 ~~D~v~~~~~l 140 (291)
..|+|+.+...
T Consensus 90 ~id~vi~~Ag~ 100 (260)
T 3awd_A 90 RVDILVACAGI 100 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987643
No 488
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=82.94 E-value=4.6 Score=33.40 Aligned_cols=74 Identities=14% Similarity=0.197 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-C
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E-A 129 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~-~ 129 (291)
.+.+||=.|++ |.++..+++.+ .|.+|++++.++..++...+.....+..++.++.+|+.+... . +
T Consensus 27 ~~k~vlITGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 27 QGKKVIVTGAS-KGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 36788877765 44444444332 278999999998877766665555554468889999887421 0 3
Q ss_pred CccEEEEc
Q 022810 130 SYDRIYSI 137 (291)
Q Consensus 130 ~~D~v~~~ 137 (291)
..|+++.+
T Consensus 106 ~iD~li~n 113 (286)
T 1xu9_A 106 GLDMLILN 113 (286)
T ss_dssp SCSEEEEC
T ss_pred CCCEEEEC
Confidence 78999977
No 489
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=82.87 E-value=6.8 Score=31.98 Aligned_cols=88 Identities=14% Similarity=0.215 Sum_probs=53.1
Q ss_pred CCEEEEEcCCc-ch-HHHHHHHHCCCCE-EEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcccc
Q 022810 64 GHTVLDVGCGW-GS-LSLYIAQKYSNCK-ITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMF 140 (291)
Q Consensus 64 ~~~vLDiGcG~-G~-~~~~l~~~~p~~~-v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~l 140 (291)
+++|.=||||. |. ++..+++. +.+ |+++|.+++..+.+.+. .+ +.. ..|..+.. ...|+|+..-.-
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~~---~g---~~~-~~~~~~~~--~~~Dvvi~av~~ 78 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRTEESARELAQK---VE---AEY-TTDLAEVN--PYAKLYIVSLKD 78 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHHH---TT---CEE-ESCGGGSC--SCCSEEEECCCH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHH---cC---Cce-eCCHHHHh--cCCCEEEEecCH
Confidence 46899999983 33 44455554 566 89999998866544332 23 222 23433321 457999876543
Q ss_pred cccccHHHHHHHHHhccccCeeEEE
Q 022810 141 EHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~L~pgG~l~i 165 (291)
. ....+++.+...+++|..++-
T Consensus 79 ~---~~~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 79 S---AFAELLQGIVEGKREEALMVH 100 (266)
T ss_dssp H---HHHHHHHHHHTTCCTTCEEEE
T ss_pred H---HHHHHHHHHHhhcCCCcEEEE
Confidence 3 235677777777777665443
No 490
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=82.76 E-value=13 Score=30.67 Aligned_cols=89 Identities=26% Similarity=0.339 Sum_probs=53.0
Q ss_pred CEEEEEcCCc-c-hHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcccccc
Q 022810 65 HTVLDVGCGW-G-SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFEH 142 (291)
Q Consensus 65 ~~vLDiGcG~-G-~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~l~~ 142 (291)
++|.=||+|. | .++..+++..++.+|+++|.+++.++.+.+ .+... ....|..+.. ...|+|+..-.-..
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~~--~~~~~~~~~~--~~aDvVilavp~~~ 78 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGIVD--EATADFKVFA--ALADVIILAVPIKK 78 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTSCS--EEESCTTTTG--GGCSEEEECSCHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCCcc--cccCCHHHhh--cCCCEEEEcCCHHH
Confidence 5799999984 3 345555555335799999999886654432 33311 1223333221 45798887654322
Q ss_pred cccHHHHHHHHHhc-cccCeeEE
Q 022810 143 MKNYQNLLKKISKW-MKEDTLLF 164 (291)
Q Consensus 143 ~~~~~~~l~~~~~~-L~pgG~l~ 164 (291)
...+++.+... ++++.+++
T Consensus 79 ---~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 79 ---TIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp ---HHHHHHHHHTSCCCTTCEEE
T ss_pred ---HHHHHHHHHhcCCCCCCEEE
Confidence 35667777777 77765544
No 491
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=82.74 E-value=6.2 Score=32.33 Aligned_cols=76 Identities=22% Similarity=0.208 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-C
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E-A 129 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~-~ 129 (291)
.+.+||=.|++ |.++..+++.+ .+.+|++++.++...+...+.+...+. ++.++.+|+.+... . +
T Consensus 30 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 30 TGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 46788888765 44544444332 278999999998877666665555443 78899999887421 0 3
Q ss_pred CccEEEEcccc
Q 022810 130 SYDRIYSIEMF 140 (291)
Q Consensus 130 ~~D~v~~~~~l 140 (291)
.+|+|+.+...
T Consensus 108 ~iD~li~~Ag~ 118 (272)
T 1yb1_A 108 DVSILVNNAGV 118 (272)
T ss_dssp CCSEEEECCCC
T ss_pred CCcEEEECCCc
Confidence 68999987644
No 492
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=82.49 E-value=4.3 Score=33.54 Aligned_cols=75 Identities=13% Similarity=0.135 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~- 128 (291)
.++++|=.|++.|. ++..|++. +.+|+.++.+++.++.+.+.+...+. ++.++.+|+.+... .
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEA--GAQVAVAARHSDALQVVADEIAGVGG-KALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46788888876542 34444544 88999999998887777776666554 78889999987431 0
Q ss_pred CCccEEEEcccc
Q 022810 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~v~~~~~l 140 (291)
+..|+++.+...
T Consensus 108 g~iD~lvnnAg~ 119 (276)
T 3r1i_A 108 GGIDIAVCNAGI 119 (276)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999987754
No 493
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=82.33 E-value=7.5 Score=31.43 Aligned_cols=76 Identities=14% Similarity=0.179 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh--CCCCeEEEEccccCCcc----------
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--ELQNVEIIVADISTFEM---------- 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~--~~~~i~~~~~d~~~~~~---------- 127 (291)
.++++|=.|++.|. ++..|++. |.+|+.++.++..++.+.+.+... +..++.++.+|+.+...
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATD--GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHH--TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 46788888876552 45555655 889999999998877777666554 22468899999987431
Q ss_pred C-CCccEEEEcccc
Q 022810 128 E-ASYDRIYSIEMF 140 (291)
Q Consensus 128 ~-~~~D~v~~~~~l 140 (291)
. +..|+++.+..+
T Consensus 84 ~~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 84 KYGAVDILVNAAAM 97 (250)
T ss_dssp HHCCEEEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 1 478999987754
No 494
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=82.21 E-value=7 Score=32.45 Aligned_cols=62 Identities=15% Similarity=0.086 Sum_probs=41.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEc-CCHHHHHHHHHHHH-HhCCCCeEEEEccccCCc
Q 022810 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGIC-NSKTQKEFIEEQCR-VLELQNVEIIVADISTFE 126 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l~~~~--p~~~v~~vD-~s~~~~~~a~~~~~-~~~~~~i~~~~~d~~~~~ 126 (291)
.++++|=.|++. .++..+++.+ .+.+|++++ .++..++.+.+.+. ..+ .++.++.+|+.+..
T Consensus 8 ~~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 8 TVPVALVTGAAK-RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVA 73 (291)
T ss_dssp CCCEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSC
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC-CeeEEEEeecCCcc
Confidence 356777777654 4444444332 278999999 88877766655554 333 36888999988754
No 495
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=82.11 E-value=23 Score=31.75 Aligned_cols=97 Identities=14% Similarity=0.200 Sum_probs=57.6
Q ss_pred CCEEEEEcCCc--chHHHHHHHHCCCCEEEEEcCCHHHH-HHHHHH---HHHhCC----------CCeEEEEccccCCcc
Q 022810 64 GHTVLDVGCGW--GSLSLYIAQKYSNCKITGICNSKTQK-EFIEEQ---CRVLEL----------QNVEIIVADISTFEM 127 (291)
Q Consensus 64 ~~~vLDiGcG~--G~~~~~l~~~~p~~~v~~vD~s~~~~-~~a~~~---~~~~~~----------~~i~~~~~d~~~~~~ 127 (291)
-.+|.=||+|. +.++..+++. +.+|+++|.+++.. +..+++ ..+.+. .++++ ..|...+
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~-t~dl~al-- 128 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA--GIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKI-TSDFHKL-- 128 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEE-ESCGGGC--
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEE-eCCHHHH--
Confidence 36899999995 3456666655 88999999999821 111111 112221 23443 3444321
Q ss_pred CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022810 128 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 128 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 167 (291)
...|+|+..-+ ....-...+++++...++|+.++...+
T Consensus 129 -~~aDlVIeAVp-e~~~vk~~v~~~l~~~~~~~aIlasnT 166 (460)
T 3k6j_A 129 -SNCDLIVESVI-EDMKLKKELFANLENICKSTCIFGTNT 166 (460)
T ss_dssp -TTCSEEEECCC-SCHHHHHHHHHHHHTTSCTTCEEEECC
T ss_pred -ccCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCCEEEecC
Confidence 46798887532 222224568899999999988765433
No 496
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=81.97 E-value=7.3 Score=31.38 Aligned_cols=75 Identities=11% Similarity=0.125 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022810 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~- 128 (291)
.++++|=.|++.|. ++..|++. |.+|++++.++..++.+.+.+...+. ++.++.+|+.+... .
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAE--GAAVAIAARRVEKLRALGDELTAAGA-KVHVLELDVADRQGVDAAVASTVEAL 82 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 36688888876442 33444444 88999999998877666655555443 68889999877421 0
Q ss_pred CCccEEEEcccc
Q 022810 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~v~~~~~l 140 (291)
+..|+++.+...
T Consensus 83 g~id~lv~nAg~ 94 (247)
T 2jah_A 83 GGLDILVNNAGI 94 (247)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999987643
No 497
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=81.96 E-value=11 Score=31.66 Aligned_cols=98 Identities=20% Similarity=0.207 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCc-c-hHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccc-
Q 022810 63 DGHTVLDVGCGW-G-SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEM- 139 (291)
Q Consensus 63 ~~~~vLDiGcG~-G-~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~~~~~D~v~~~~~- 139 (291)
+..+|.=||+|. | ..+..++......+++.+|++++....+..... ...+++.. ..|...+ ...|+|+...-
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~-~~~~~i~~-t~d~~~l---~~aD~Vi~aag~ 87 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEI-FNLPNVEI-SKDLSAS---AHSKVVIFTVNS 87 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHH-HTCTTEEE-ESCGGGG---TTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhh-hcCCCeEE-eCCHHHH---CCCCEEEEcCCC
Confidence 346899999995 3 255556655323489999999864444444433 22235554 3554332 46799988641
Q ss_pred -----------ccccccHHHHHHHHHhccccCeeEEEE
Q 022810 140 -----------FEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 140 -----------l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
...++-...+++.+.+.. |++++++.
T Consensus 88 ~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 124 (303)
T 2i6t_A 88 LGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVA 124 (303)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEc
Confidence 222222455666666654 99997663
No 498
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=81.96 E-value=8 Score=32.05 Aligned_cols=94 Identities=12% Similarity=0.127 Sum_probs=57.1
Q ss_pred CEEEEEcCCc-c-hHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh-------C--C---------CCeEEEEccccC
Q 022810 65 HTVLDVGCGW-G-SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL-------E--L---------QNVEIIVADIST 124 (291)
Q Consensus 65 ~~vLDiGcG~-G-~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~-------~--~---------~~i~~~~~d~~~ 124 (291)
.+|.=||+|. | .++..+++. +.+|+++|.+++.++.+.+..... + + .++.. ..|..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~ 81 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH--GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQ 81 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHH
Confidence 5788899884 2 234444544 889999999999888777653221 1 1 11232 233322
Q ss_pred CccCCCccEEEEcccccccccHHHHHHHHHhccccCeeEE
Q 022810 125 FEMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLF 164 (291)
Q Consensus 125 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 164 (291)
. -...|+|+..-+- .......+++++...++|+.+++
T Consensus 82 ~--~~~aDlVi~av~~-~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 82 A--VKDADLVIEAVPE-SLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp H--TTTCSEEEECCCS-CHHHHHHHHHHHHHHSCTTCEEE
T ss_pred H--hccCCEEEEeccC-cHHHHHHHHHHHHhhCCCCcEEE
Confidence 1 1457988875332 22234667888888888877654
No 499
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=81.90 E-value=11 Score=30.66 Aligned_cols=76 Identities=18% Similarity=0.174 Sum_probs=44.3
Q ss_pred CCCEEEEEcCCc-chHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022810 63 DGHTVLDVGCGW-GSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~-G~~~~~l~~~~--p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~~~~~d~~~~~~----------~- 128 (291)
.++++|=.|++. |.++..+++.+ .+.+|++++.++...+.+.+.....+ +..++.+|+.+... .
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG--SDIVLQCDVAEDASIDTMFAELGKVW 85 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC--CcEEEEccCCCHHHHHHHHHHHHHHc
Confidence 467888888752 44444444332 27899999987632222222222222 34678889876421 1
Q ss_pred CCccEEEEcccc
Q 022810 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~v~~~~~l 140 (291)
+..|+++.+...
T Consensus 86 g~iD~lv~~Ag~ 97 (265)
T 1qsg_A 86 PKFDGFVHSIGF 97 (265)
T ss_dssp SSEEEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999987654
No 500
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=81.89 E-value=2.9 Score=45.79 Aligned_cols=102 Identities=14% Similarity=0.212 Sum_probs=65.6
Q ss_pred HHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeE-EEEccccC----CccCC
Q 022810 57 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVE-IIVADIST----FEMEA 129 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~p~~~v~~vD~s~~~~~~a~~~~~~~~~~~i~-~~~~d~~~----~~~~~ 129 (291)
....+++|.+||=.|+ |.|..++.+++.. |++|++++.+++..+.+++.....+.+.+- ....++.+ .....
T Consensus 1661 ~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~-Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~ 1739 (2512)
T 2vz8_A 1661 VRGRMQPGESVLIHSGSGGVGQAAIAIALSR-GCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGK 1739 (2512)
T ss_dssp TTTCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSC
T ss_pred HHhcCCCCCEEEEEeCChHHHHHHHHHHHHc-CCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCC
Confidence 3446789999999974 5788888899876 889999999888766665432222322211 00111111 01114
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022810 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 130 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 166 (291)
.+|+|+-.. . ...+....++|+|+|+++..
T Consensus 1740 GvDvVld~~-----g--~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1740 GVDLVLNSL-----A--EEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp CEEEEEECC-----C--HHHHHHHHTTEEEEEEEEEC
T ss_pred CceEEEECC-----C--chHHHHHHHhcCCCcEEEEe
Confidence 589988642 1 35688889999999997764
Done!