Query 022811
Match_columns 291
No_of_seqs 235 out of 1650
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 06:18:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022811.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022811hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02555 limonoid glucosyltran 100.0 5.3E-58 1.2E-62 433.8 29.3 284 1-289 179-470 (480)
2 PLN02410 UDP-glucoronosyl/UDP- 100.0 1.1E-57 2.4E-62 429.7 29.3 276 1-288 172-450 (451)
3 PLN02207 UDP-glycosyltransfera 100.0 4E-57 8.7E-62 426.2 28.4 275 2-289 182-466 (468)
4 PLN02173 UDP-glucosyl transfer 100.0 8.5E-57 1.8E-61 422.4 28.2 279 1-287 159-447 (449)
5 PLN03015 UDP-glucosyl transfer 100.0 2.1E-56 4.6E-61 420.2 27.7 272 1-287 172-467 (470)
6 PLN02992 coniferyl-alcohol glu 100.0 6.5E-56 1.4E-60 418.9 27.9 273 1-288 168-469 (481)
7 PLN00164 glucosyltransferase; 100.0 1.2E-55 2.6E-60 419.4 28.4 278 1-290 174-475 (480)
8 PLN02562 UDP-glycosyltransfera 100.0 2.7E-55 5.9E-60 414.0 28.7 272 1-287 171-448 (448)
9 PLN02210 UDP-glucosyl transfer 100.0 4.1E-55 9E-60 413.3 28.8 281 1-287 166-454 (456)
10 PLN02152 indole-3-acetate beta 100.0 4.7E-55 1E-59 411.2 28.1 282 1-287 160-455 (455)
11 PLN02167 UDP-glycosyltransfera 100.0 1.3E-54 2.8E-59 412.7 26.8 275 3-290 187-474 (475)
12 PLN02554 UDP-glycosyltransfera 100.0 1.9E-54 4.2E-59 412.1 26.4 272 3-289 182-479 (481)
13 PLN02863 UDP-glucoronosyl/UDP- 100.0 5E-54 1.1E-58 407.4 27.7 285 1-289 180-472 (477)
14 PLN03004 UDP-glycosyltransfera 100.0 3E-54 6.5E-59 405.4 24.2 263 1-277 176-450 (451)
15 PLN02764 glycosyltransferase f 100.0 1.4E-53 3E-58 399.9 27.8 270 4-289 166-446 (453)
16 PLN02534 UDP-glycosyltransfera 100.0 1.8E-53 4E-58 403.5 27.6 279 4-289 187-487 (491)
17 PLN02670 transferase, transfer 100.0 9.9E-53 2.1E-57 396.8 26.0 276 4-289 182-466 (472)
18 PLN02208 glycosyltransferase f 100.0 2.1E-52 4.5E-57 393.0 27.3 266 4-289 165-440 (442)
19 PLN02448 UDP-glycosyltransfera 100.0 5.2E-52 1.1E-56 393.7 28.2 273 2-289 177-458 (459)
20 PLN03007 UDP-glucosyltransfera 100.0 9.7E-52 2.1E-56 393.9 28.9 269 20-290 202-482 (482)
21 PLN00414 glycosyltransferase f 100.0 7.7E-51 1.7E-55 382.8 27.0 251 25-289 182-441 (446)
22 PHA03392 egt ecdysteroid UDP-g 100.0 6.9E-40 1.5E-44 313.5 23.3 223 31-289 241-467 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 1.6E-41 3.4E-46 326.1 11.0 217 34-288 225-443 (500)
24 KOG1192 UDP-glucuronosyl and U 100.0 1.6E-35 3.5E-40 284.0 18.9 208 35-267 224-438 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 9.3E-28 2E-32 224.0 20.5 206 39-286 183-389 (392)
26 COG1819 Glycosyl transferases, 100.0 2.5E-27 5.3E-32 221.4 16.7 165 102-288 235-400 (406)
27 cd03784 GT1_Gtf_like This fami 99.9 2.8E-25 6E-30 207.6 17.4 171 91-285 228-400 (401)
28 PRK12446 undecaprenyldiphospho 99.6 7.9E-15 1.7E-19 135.1 16.0 144 102-260 183-335 (352)
29 COG0707 MurG UDP-N-acetylgluco 99.5 8.7E-14 1.9E-18 127.7 14.0 146 103-260 182-337 (357)
30 PF04101 Glyco_tran_28_C: Glyc 99.5 6.7E-16 1.4E-20 127.4 -2.2 136 106-249 1-145 (167)
31 PF13528 Glyco_trans_1_3: Glyc 99.4 7.4E-13 1.6E-17 119.9 9.7 121 103-245 191-317 (318)
32 TIGR00661 MJ1255 conserved hyp 99.4 1.5E-12 3.3E-17 118.5 10.1 123 104-249 188-315 (321)
33 PRK00726 murG undecaprenyldiph 99.3 8.4E-11 1.8E-15 108.2 14.0 92 163-260 236-333 (357)
34 PRK13609 diacylglycerol glucos 99.2 1E-09 2.2E-14 102.0 19.4 133 103-249 201-339 (380)
35 PRK13608 diacylglycerol glucos 99.2 5.7E-10 1.2E-14 104.4 14.5 133 103-249 201-339 (391)
36 cd03785 GT1_MurG MurG is an N- 99.2 3.8E-10 8.2E-15 103.2 12.7 139 103-249 180-325 (350)
37 PLN02605 monogalactosyldiacylg 99.1 1E-08 2.2E-13 95.5 21.7 135 102-248 204-347 (382)
38 TIGR03492 conserved hypothetic 99.0 4.7E-08 1E-12 91.6 18.0 182 34-249 159-365 (396)
39 TIGR01133 murG undecaprenyldip 98.9 1.7E-08 3.6E-13 92.3 12.3 75 172-249 244-322 (348)
40 TIGR03590 PseG pseudaminic aci 98.8 2E-08 4.4E-13 89.7 8.9 103 105-218 171-278 (279)
41 TIGR00215 lpxB lipid-A-disacch 98.8 1.1E-07 2.4E-12 88.8 13.1 168 102-282 189-382 (385)
42 PRK00025 lpxB lipid-A-disaccha 98.8 1.7E-07 3.7E-12 86.9 14.3 85 173-261 256-355 (380)
43 COG4671 Predicted glycosyl tra 98.7 9.2E-07 2E-11 79.4 16.7 183 36-249 168-366 (400)
44 cd03814 GT1_like_2 This family 98.4 9.3E-05 2E-09 66.8 21.3 129 104-249 196-333 (364)
45 cd04946 GT1_AmsK_like This fam 98.2 0.00023 5E-09 66.9 20.2 111 162-283 289-406 (407)
46 PRK05749 3-deoxy-D-manno-octul 98.2 0.00039 8.5E-09 65.6 20.5 81 174-260 315-401 (425)
47 cd03801 GT1_YqgM_like This fam 98.1 0.0014 3.1E-08 58.3 22.7 82 160-249 254-342 (374)
48 PF13844 Glyco_transf_41: Glyc 98.1 0.00011 2.4E-09 69.7 14.8 141 102-249 282-431 (468)
49 cd03804 GT1_wbaZ_like This fam 98.0 0.00022 4.7E-09 65.2 15.8 126 108-249 198-327 (351)
50 PLN02871 UDP-sulfoquinovose:DA 98.0 0.0026 5.6E-08 60.9 23.4 137 106-260 264-413 (465)
51 cd03798 GT1_wlbH_like This fam 98.0 0.0041 8.9E-08 55.6 23.2 83 161-249 258-345 (377)
52 cd03823 GT1_ExpE7_like This fa 98.0 0.00028 6.1E-09 63.4 15.5 133 103-249 189-330 (359)
53 PRK14089 ipid-A-disaccharide s 98.0 0.00032 6.9E-09 64.6 15.7 221 28-265 69-332 (347)
54 cd03795 GT1_like_4 This family 97.9 0.00012 2.6E-09 66.4 12.0 145 105-261 191-346 (357)
55 cd03817 GT1_UGDG_like This fam 97.9 0.00024 5.3E-09 64.0 14.0 145 104-262 201-358 (374)
56 cd03794 GT1_wbuB_like This fam 97.9 0.00023 5E-09 64.3 13.8 137 103-249 218-366 (394)
57 cd03808 GT1_cap1E_like This fa 97.9 0.0013 2.7E-08 58.8 18.3 135 103-249 186-330 (359)
58 cd03799 GT1_amsK_like This is 97.9 0.00097 2.1E-08 60.3 17.7 136 104-250 178-329 (355)
59 KOG3349 Predicted glycosyltran 97.9 9E-05 2E-09 58.9 8.5 110 105-221 4-125 (170)
60 PRK15427 colanic acid biosynth 97.9 0.00084 1.8E-08 63.2 16.9 81 161-249 278-372 (406)
61 PF00534 Glycos_transf_1: Glyc 97.9 0.00024 5.2E-09 58.0 11.3 136 102-249 12-159 (172)
62 cd04949 GT1_gtfA_like This fam 97.8 0.001 2.2E-08 61.2 16.5 100 161-265 260-363 (372)
63 cd05844 GT1_like_7 Glycosyltra 97.8 0.00043 9.3E-09 63.3 13.8 81 161-249 244-337 (367)
64 cd03820 GT1_amsD_like This fam 97.8 0.0018 3.8E-08 57.6 17.2 82 161-249 234-320 (348)
65 cd03822 GT1_ecORF704_like This 97.8 0.0043 9.3E-08 56.0 20.0 82 161-249 246-335 (366)
66 cd03821 GT1_Bme6_like This fam 97.8 0.00073 1.6E-08 60.8 14.6 92 161-260 261-358 (375)
67 TIGR00236 wecB UDP-N-acetylglu 97.8 0.00031 6.7E-09 64.9 12.0 136 104-259 197-342 (365)
68 PRK10307 putative glycosyl tra 97.8 0.0023 5E-08 60.0 17.5 94 162-261 284-387 (412)
69 PRK15484 lipopolysaccharide 1, 97.7 0.0017 3.6E-08 60.6 16.2 83 160-249 255-345 (380)
70 cd03786 GT1_UDP-GlcNAc_2-Epime 97.7 0.00029 6.3E-09 64.7 10.8 134 103-249 197-338 (363)
71 cd03825 GT1_wcfI_like This fam 97.7 0.0095 2E-07 54.0 20.5 82 160-249 242-331 (365)
72 cd03800 GT1_Sucrose_synthase T 97.7 0.0016 3.5E-08 60.0 15.6 81 161-249 282-369 (398)
73 PRK09922 UDP-D-galactose:(gluc 97.7 0.00079 1.7E-08 62.0 13.4 162 105-288 180-358 (359)
74 cd03807 GT1_WbnK_like This fam 97.7 0.0019 4.1E-08 57.9 15.2 78 162-249 251-333 (365)
75 cd04962 GT1_like_5 This family 97.6 0.0022 4.7E-08 58.7 14.8 93 161-261 252-350 (371)
76 cd03809 GT1_mtfB_like This fam 97.6 0.0046 9.9E-08 55.8 16.7 82 160-249 251-337 (365)
77 TIGR03088 stp2 sugar transfera 97.5 0.0013 2.8E-08 60.7 12.4 80 162-249 255-339 (374)
78 COG3980 spsG Spore coat polysa 97.5 0.0016 3.5E-08 57.2 11.0 144 104-262 158-304 (318)
79 cd04951 GT1_WbdM_like This fam 97.5 0.0028 6.1E-08 57.4 13.2 78 161-248 244-326 (360)
80 TIGR02149 glgA_Coryne glycogen 97.5 0.0033 7.2E-08 58.0 13.9 142 105-260 201-365 (388)
81 TIGR03449 mycothiol_MshA UDP-N 97.4 0.0054 1.2E-07 57.2 15.2 92 161-260 282-381 (405)
82 TIGR03087 stp1 sugar transfera 97.4 0.0061 1.3E-07 56.9 15.4 81 161-249 279-363 (397)
83 TIGR02918 accessory Sec system 97.4 0.024 5.1E-07 55.0 19.5 99 161-265 375-484 (500)
84 cd04950 GT1_like_1 Glycosyltra 97.4 0.013 2.7E-07 54.4 16.8 183 30-249 148-341 (373)
85 cd03816 GT1_ALG1_like This fam 97.4 0.0046 1E-07 58.3 13.9 91 162-262 294-399 (415)
86 PF02684 LpxB: Lipid-A-disacch 97.4 0.009 2E-07 55.5 15.3 207 44-277 140-366 (373)
87 KOG4626 O-linked N-acetylgluco 97.3 0.0017 3.8E-08 62.6 10.4 139 102-249 756-905 (966)
88 cd03805 GT1_ALG2_like This fam 97.3 0.0046 1E-07 57.2 13.0 91 161-260 279-377 (392)
89 PF02350 Epimerase_2: UDP-N-ac 97.3 0.00072 1.6E-08 62.3 7.3 184 35-249 122-319 (346)
90 cd03819 GT1_WavL_like This fam 97.3 0.0076 1.6E-07 54.6 13.6 149 103-261 183-345 (355)
91 PRK09814 beta-1,6-galactofuran 97.2 0.0021 4.6E-08 58.8 9.5 110 160-283 205-330 (333)
92 PF13692 Glyco_trans_1_4: Glyc 97.1 0.0013 2.7E-08 51.4 6.3 80 161-248 52-135 (135)
93 cd03811 GT1_WabH_like This fam 97.1 0.0096 2.1E-07 52.8 12.9 136 103-249 187-333 (353)
94 cd03796 GT1_PIG-A_like This fa 97.1 0.019 4E-07 53.7 14.7 79 161-249 249-334 (398)
95 COG5017 Uncharacterized conser 97.1 0.0057 1.2E-07 48.0 8.9 107 107-230 2-122 (161)
96 cd04955 GT1_like_6 This family 97.0 0.015 3.3E-07 52.7 12.6 124 108-249 196-331 (363)
97 TIGR02472 sucr_P_syn_N sucrose 96.9 0.022 4.8E-07 54.1 13.9 83 161-249 316-407 (439)
98 cd03813 GT1_like_3 This family 96.9 0.035 7.5E-07 53.4 15.4 81 161-249 353-443 (475)
99 cd03818 GT1_ExpC_like This fam 96.9 0.0033 7.1E-08 58.7 8.0 82 162-249 281-367 (396)
100 cd03792 GT1_Trehalose_phosphor 96.9 0.051 1.1E-06 50.1 15.4 90 161-260 251-350 (372)
101 COG3914 Spy Predicted O-linked 96.9 0.033 7.2E-07 53.6 14.0 133 102-243 427-573 (620)
102 PRK01021 lpxB lipid-A-disaccha 96.9 0.099 2.2E-06 51.3 17.6 207 44-281 368-601 (608)
103 cd03812 GT1_CapH_like This fam 96.8 0.033 7.1E-07 50.5 13.7 80 161-249 248-332 (358)
104 cd03802 GT1_AviGT4_like This f 96.8 0.023 4.9E-07 51.0 11.8 129 106-248 172-308 (335)
105 COG1519 KdtA 3-deoxy-D-manno-o 96.7 0.014 3E-07 54.4 9.9 76 184-264 327-403 (419)
106 PLN02949 transferase, transfer 96.7 0.086 1.9E-06 50.6 15.5 94 161-262 334-438 (463)
107 PRK15179 Vi polysaccharide bio 96.3 0.14 3E-06 51.6 15.2 93 161-260 573-672 (694)
108 PRK10017 colanic acid biosynth 96.2 0.27 5.8E-06 46.7 15.8 175 96-287 226-423 (426)
109 cd03806 GT1_ALG11_like This fa 96.2 0.27 5.7E-06 46.5 15.7 79 161-249 304-393 (419)
110 TIGR02468 sucrsPsyn_pln sucros 96.2 0.1 2.3E-06 54.3 13.6 95 161-261 547-651 (1050)
111 PRK15490 Vi polysaccharide bio 96.1 0.17 3.7E-06 49.4 14.1 114 161-288 454-575 (578)
112 TIGR02095 glgA glycogen/starch 96.0 0.16 3.4E-06 48.7 13.5 132 105-247 291-436 (473)
113 PHA01633 putative glycosyl tra 96.0 0.31 6.8E-06 44.7 14.5 86 160-248 199-307 (335)
114 PF06722 DUF1205: Protein of u 95.9 0.0091 2E-07 44.5 3.6 53 91-143 27-84 (97)
115 PRK14098 glycogen synthase; Pr 95.9 0.23 5E-06 48.0 14.1 132 106-246 308-449 (489)
116 PLN02275 transferase, transfer 95.9 0.066 1.4E-06 49.6 9.9 75 162-246 286-371 (371)
117 PF13524 Glyco_trans_1_2: Glyc 95.9 0.075 1.6E-06 38.6 8.3 82 187-283 9-91 (92)
118 cd03791 GT1_Glycogen_synthase_ 95.5 0.26 5.6E-06 47.1 12.6 137 104-247 295-441 (476)
119 TIGR03568 NeuC_NnaA UDP-N-acet 95.0 0.2 4.3E-06 46.6 9.9 128 104-246 201-337 (365)
120 PRK00654 glgA glycogen synthas 94.8 1.1 2.3E-05 43.0 14.6 136 105-247 282-427 (466)
121 COG0763 LpxB Lipid A disacchar 94.6 1.1 2.5E-05 41.4 13.5 217 36-284 137-377 (381)
122 PF04007 DUF354: Protein of un 94.4 1.1 2.5E-05 41.0 13.1 139 89-246 165-308 (335)
123 PHA01630 putative group 1 glyc 94.3 0.69 1.5E-05 42.3 11.5 77 169-248 197-294 (331)
124 TIGR02919 accessory Sec system 93.3 7.8 0.00017 37.0 17.3 186 25-264 229-425 (438)
125 TIGR03713 acc_sec_asp1 accesso 92.7 0.31 6.7E-06 47.5 6.6 91 162-265 409-506 (519)
126 PLN02846 digalactosyldiacylgly 92.6 3.7 8E-05 39.4 13.8 73 166-249 288-364 (462)
127 PLN02501 digalactosyldiacylgly 92.4 3.7 8E-05 41.4 13.5 76 163-249 602-682 (794)
128 TIGR02400 trehalose_OtsA alpha 92.1 1.7 3.7E-05 41.7 10.9 103 168-287 342-455 (456)
129 PLN02316 synthase/transferase 91.5 5.4 0.00012 42.1 14.3 113 161-282 899-1027(1036)
130 PF06258 Mito_fiss_Elm1: Mitoc 91.2 1.5 3.3E-05 39.8 9.0 39 171-210 221-259 (311)
131 cd01635 Glycosyltransferase_GT 90.7 1.6 3.4E-05 36.1 8.2 48 161-210 160-215 (229)
132 PRK10125 putative glycosyl tra 89.8 7.6 0.00017 36.5 12.8 101 120-242 256-365 (405)
133 COG0381 WecB UDP-N-acetylgluco 89.7 2.6 5.7E-05 39.1 9.1 89 163-264 263-354 (383)
134 PLN02939 transferase, transfer 89.5 11 0.00024 39.4 14.3 84 161-247 836-930 (977)
135 TIGR02193 heptsyl_trn_I lipopo 87.1 3.8 8.3E-05 36.9 8.6 138 96-246 171-319 (319)
136 cd03788 GT1_TPS Trehalose-6-Ph 87.0 3.2 6.8E-05 39.8 8.4 73 166-249 345-428 (460)
137 TIGR02470 sucr_synth sucrose s 84.1 6.2 0.00013 40.4 9.1 80 161-246 618-707 (784)
138 cd03789 GT1_LPS_heptosyltransf 83.6 5.3 0.00011 35.2 7.7 95 104-206 121-223 (279)
139 PRK14099 glycogen synthase; Pr 83.0 29 0.00062 33.6 12.9 87 160-249 348-448 (485)
140 PLN00142 sucrose synthase 82.0 9.3 0.0002 39.3 9.4 57 184-246 670-730 (815)
141 PLN03063 alpha,alpha-trehalose 78.9 9.8 0.00021 39.2 8.5 98 174-287 371-476 (797)
142 cd03793 GT1_Glycogen_synthase_ 78.6 6.5 0.00014 38.8 6.8 74 174-249 470-553 (590)
143 PF05159 Capsule_synth: Capsul 76.6 7.4 0.00016 34.2 6.2 42 164-208 185-226 (269)
144 PF00731 AIRC: AIR carboxylase 76.1 39 0.00085 27.2 10.9 137 106-267 2-148 (150)
145 TIGR02201 heptsyl_trn_III lipo 75.5 23 0.0005 32.2 9.3 98 103-206 180-285 (344)
146 COG0438 RfaG Glycosyltransfera 73.7 57 0.0012 27.9 14.7 80 162-249 257-343 (381)
147 PF01075 Glyco_transf_9: Glyco 72.4 6.4 0.00014 33.8 4.6 98 103-206 104-208 (247)
148 TIGR02195 heptsyl_trn_II lipop 71.0 30 0.00065 31.3 8.9 96 103-206 173-276 (334)
149 PRK14501 putative bifunctional 70.9 15 0.00032 37.5 7.4 110 166-288 346-462 (726)
150 PRK12446 undecaprenyldiphospho 70.6 15 0.00032 33.8 6.8 96 105-206 3-120 (352)
151 PRK10916 ADP-heptose:LPS hepto 68.0 36 0.00077 31.1 8.8 96 103-206 179-286 (348)
152 PRK10964 ADP-heptose:LPS hepto 67.2 23 0.0005 31.9 7.3 132 104-247 178-321 (322)
153 PRK10422 lipopolysaccharide co 67.1 38 0.00082 31.0 8.8 98 103-206 182-287 (352)
154 KOG0853 Glycosyltransferase [C 66.3 35 0.00076 33.0 8.4 57 192-258 381-440 (495)
155 COG4370 Uncharacterized protei 66.3 28 0.00061 31.6 7.2 85 168-259 301-387 (412)
156 PRK10353 3-methyl-adenine DNA 65.4 34 0.00073 28.7 7.2 76 204-282 21-119 (187)
157 PLN02470 acetolactate synthase 65.0 32 0.00069 34.1 8.3 93 110-208 2-110 (585)
158 COG3660 Predicted nucleoside-d 64.7 97 0.0021 27.6 10.0 91 106-206 164-271 (329)
159 PF04464 Glyphos_transf: CDP-G 64.5 4.2 9E-05 37.5 1.9 112 161-282 251-366 (369)
160 PF07429 Glyco_transf_56: 4-al 61.4 1.2E+02 0.0027 28.0 10.6 135 104-247 183-332 (360)
161 COG0859 RfaF ADP-heptose:LPS h 59.9 50 0.0011 30.1 8.1 95 104-206 175-276 (334)
162 TIGR02398 gluc_glyc_Psyn gluco 59.2 1.8E+02 0.0039 28.3 14.6 109 165-289 365-483 (487)
163 PF06506 PrpR_N: Propionate ca 57.7 12 0.00027 30.7 3.4 33 177-210 31-63 (176)
164 PRK15062 hydrogenase isoenzyme 53.2 52 0.0011 30.5 6.8 26 221-247 209-234 (364)
165 COG0801 FolK 7,8-dihydro-6-hyd 53.1 30 0.00065 28.2 4.8 35 106-140 3-37 (160)
166 KOG2941 Beta-1,4-mannosyltrans 50.3 2.2E+02 0.0047 26.6 13.6 143 103-261 253-423 (444)
167 COG4394 Uncharacterized protei 49.8 2E+02 0.0043 26.0 9.6 153 118-286 187-368 (370)
168 PF10933 DUF2827: Protein of u 49.0 1.1E+02 0.0025 28.3 8.3 100 166-286 257-363 (364)
169 cd01840 SGNH_hydrolase_yrhL_li 48.0 55 0.0012 25.7 5.7 38 103-141 50-87 (150)
170 PF10093 DUF2331: Uncharacteri 46.7 42 0.00091 31.3 5.3 90 116-208 191-290 (374)
171 cd07039 TPP_PYR_POX Pyrimidine 44.8 65 0.0014 26.1 5.7 27 182-208 65-97 (164)
172 cd03412 CbiK_N Anaerobic cobal 44.7 44 0.00096 25.9 4.5 37 105-141 2-40 (127)
173 PF06180 CbiK: Cobalt chelatas 44.0 31 0.00067 30.6 3.8 39 105-143 2-43 (262)
174 PF03808 Glyco_tran_WecB: Glyc 40.4 1.1E+02 0.0024 25.0 6.4 76 25-115 36-113 (172)
175 PRK06718 precorrin-2 dehydroge 40.2 1.8E+02 0.0039 24.5 7.8 142 103-268 10-165 (202)
176 PF08030 NAD_binding_6: Ferric 40.0 20 0.00043 28.3 1.9 39 105-143 3-46 (156)
177 PRK04885 ppnK inorganic polyph 39.9 64 0.0014 28.6 5.2 51 183-249 38-94 (265)
178 TIGR00725 conserved hypothetic 39.8 71 0.0015 25.8 5.1 98 93-208 22-123 (159)
179 cd07038 TPP_PYR_PDC_IPDC_like 39.6 65 0.0014 26.0 4.9 28 181-208 60-93 (162)
180 TIGR00075 hypD hydrogenase exp 39.3 1.2E+02 0.0025 28.3 6.9 26 221-247 215-240 (369)
181 cd06533 Glyco_transf_WecG_TagA 39.1 1.2E+02 0.0026 24.7 6.5 97 25-141 34-132 (171)
182 TIGR01761 thiaz-red thiazoliny 38.8 1.5E+02 0.0033 27.2 7.7 113 124-249 16-137 (343)
183 PRK08155 acetolactate synthase 38.7 77 0.0017 31.1 6.1 27 181-207 77-109 (564)
184 PLN02929 NADH kinase 36.5 65 0.0014 29.2 4.7 66 178-249 64-138 (301)
185 TIGR03609 S_layer_CsaB polysac 36.4 2.9E+02 0.0063 24.3 9.1 98 104-207 172-276 (298)
186 PRK06276 acetolactate synthase 36.1 3.6E+02 0.0078 26.7 10.4 59 184-247 470-531 (586)
187 COG3195 Uncharacterized protei 36.0 2.3E+02 0.0049 23.3 7.2 74 191-265 88-163 (176)
188 PRK02797 4-alpha-L-fucosyltran 35.9 3.4E+02 0.0075 24.8 11.9 132 106-246 146-292 (322)
189 PRK02155 ppnK NAD(+)/NADH kina 35.3 84 0.0018 28.2 5.3 54 178-249 63-120 (291)
190 PRK06276 acetolactate synthase 35.1 1.7E+02 0.0037 28.9 8.0 27 181-207 64-96 (586)
191 PF01924 HypD: Hydrogenase for 34.7 46 0.00099 30.7 3.5 87 175-286 173-261 (355)
192 PF06204 CBM_X: Putative carbo 34.3 26 0.00056 24.0 1.4 23 169-191 24-46 (66)
193 PRK03372 ppnK inorganic polyph 34.2 1.2E+02 0.0026 27.5 6.1 54 178-249 72-129 (306)
194 PF05225 HTH_psq: helix-turn-h 34.0 74 0.0016 19.8 3.4 26 234-261 1-26 (45)
195 PRK14077 pnk inorganic polypho 33.9 92 0.002 27.9 5.3 55 177-249 63-121 (287)
196 PRK14075 pnk inorganic polypho 33.9 2E+02 0.0043 25.2 7.4 51 183-249 44-95 (256)
197 PRK09071 hypothetical protein; 33.4 2E+02 0.0044 26.3 7.5 67 215-289 4-70 (323)
198 cd07035 TPP_PYR_POX_like Pyrim 33.3 2E+02 0.0044 22.5 6.8 26 183-208 62-93 (155)
199 PRK01911 ppnK inorganic polyph 33.2 1.2E+02 0.0027 27.2 6.0 54 178-249 64-121 (292)
200 PF05014 Nuc_deoxyrib_tr: Nucl 32.3 67 0.0014 24.0 3.6 35 175-209 58-98 (113)
201 PRK04539 ppnK inorganic polyph 32.0 1.4E+02 0.0031 26.8 6.2 54 178-249 68-125 (296)
202 cd07037 TPP_PYR_MenD Pyrimidin 31.3 47 0.001 27.0 2.8 27 182-208 62-94 (162)
203 PF08452 DNAP_B_exo_N: DNA pol 30.6 24 0.00051 18.4 0.6 17 93-109 4-20 (22)
204 PF02776 TPP_enzyme_N: Thiamin 29.5 79 0.0017 25.6 3.9 27 182-208 66-98 (172)
205 COG1609 PurR Transcriptional r 29.2 3.6E+02 0.0079 24.4 8.6 32 103-134 175-206 (333)
206 PRK14092 2-amino-4-hydroxy-6-h 28.8 1.4E+02 0.003 24.4 5.1 30 103-132 6-35 (163)
207 PF03352 Adenine_glyco: Methyl 28.1 58 0.0013 27.1 2.8 75 205-283 17-115 (179)
208 PF05673 DUF815: Protein of un 28.0 4.2E+02 0.009 23.3 10.9 140 120-288 92-247 (249)
209 PRK06546 pyruvate dehydrogenas 28.0 6E+02 0.013 25.1 11.0 58 184-247 459-518 (578)
210 PRK05579 bifunctional phosphop 27.9 5.2E+02 0.011 24.3 11.7 135 104-247 7-182 (399)
211 PLN02948 phosphoribosylaminoim 27.8 6.1E+02 0.013 25.2 13.9 142 103-272 409-563 (577)
212 PF06785 UPF0242: Uncharacteri 27.5 1E+02 0.0022 28.2 4.4 66 195-260 20-96 (401)
213 cd07025 Peptidase_S66 LD-Carbo 27.4 1.1E+02 0.0024 27.2 4.7 75 116-209 45-121 (282)
214 TIGR03845 sulfopyru_alph sulfo 27.1 1.5E+02 0.0033 23.8 5.1 25 183-207 62-91 (157)
215 COG0041 PurE Phosphoribosylcar 27.1 3.4E+02 0.0075 22.0 12.9 139 106-272 4-155 (162)
216 PF05693 Glycogen_syn: Glycoge 27.0 69 0.0015 31.9 3.5 92 174-265 465-566 (633)
217 PRK02649 ppnK inorganic polyph 26.7 1.4E+02 0.0029 27.1 5.1 52 182-249 70-125 (305)
218 PRK03378 ppnK inorganic polyph 26.7 1.7E+02 0.0037 26.3 5.8 54 178-249 63-120 (292)
219 COG1737 RpiR Transcriptional r 26.3 2.2E+02 0.0048 25.2 6.4 42 172-213 171-217 (281)
220 COG3340 PepE Peptidase E [Amin 25.9 4.3E+02 0.0094 22.8 9.6 45 94-139 24-68 (224)
221 PRK01231 ppnK inorganic polyph 25.7 1.9E+02 0.0042 26.0 5.9 54 178-249 62-119 (295)
222 PRK11914 diacylglycerol kinase 25.7 4E+02 0.0086 23.7 8.1 26 183-208 67-96 (306)
223 PF04558 tRNA_synt_1c_R1: Glut 24.8 95 0.0021 25.4 3.5 31 214-249 103-133 (164)
224 PF09547 Spore_IV_A: Stage IV 24.4 3.3E+02 0.0071 26.2 7.2 73 175-247 141-234 (492)
225 PLN03064 alpha,alpha-trehalose 24.2 8.9E+02 0.019 25.8 12.1 99 174-288 455-561 (934)
226 COG0299 PurN Folate-dependent 24.1 2.4E+02 0.0052 23.9 5.7 98 121-244 67-171 (200)
227 COG2230 Cfa Cyclopropane fatty 24.0 87 0.0019 28.1 3.3 40 187-226 80-121 (283)
228 TIGR02482 PFKA_ATP 6-phosphofr 24.0 69 0.0015 29.0 2.7 37 175-211 86-126 (301)
229 TIGR00173 menD 2-succinyl-5-en 24.0 1.7E+02 0.0037 27.7 5.6 26 181-206 64-95 (432)
230 PF14165 YtzH: YtzH-like prote 24.0 2.7E+02 0.0058 20.2 5.2 36 234-272 27-62 (87)
231 PLN02935 Bifunctional NADH kin 23.9 1.9E+02 0.0042 28.2 5.8 53 181-249 263-319 (508)
232 TIGR00624 tag DNA-3-methyladen 23.8 2.3E+02 0.005 23.5 5.6 60 204-266 20-96 (179)
233 COG1422 Predicted membrane pro 23.6 3.1E+02 0.0068 23.2 6.3 70 192-272 24-95 (201)
234 TIGR03837 efp_adjacent_2 conse 23.5 2.4E+02 0.0052 26.4 6.1 98 115-217 188-295 (371)
235 TIGR03457 sulphoacet_xsc sulfo 23.5 4.7E+02 0.01 25.8 8.7 27 181-207 65-97 (579)
236 TIGR01358 DAHP_synth_II 3-deox 23.4 3.7E+02 0.008 25.7 7.4 48 94-143 298-347 (443)
237 PRK07525 sulfoacetaldehyde ace 23.0 4.5E+02 0.0098 26.0 8.5 27 181-207 69-101 (588)
238 PF11740 KfrA_N: Plasmid repli 22.9 1.6E+02 0.0035 22.1 4.3 14 234-247 2-15 (120)
239 PRK08322 acetolactate synthase 22.7 2.1E+02 0.0046 27.9 6.1 27 181-207 64-96 (547)
240 PF05818 TraT: Enterobacterial 22.7 1.1E+02 0.0025 26.1 3.6 41 97-137 13-54 (215)
241 PRK08199 thiamine pyrophosphat 22.4 2.1E+02 0.0045 28.1 6.0 27 181-207 72-104 (557)
242 PRK07449 2-succinyl-5-enolpyru 22.3 2.1E+02 0.0045 28.1 6.0 27 182-208 74-106 (568)
243 PRK06932 glycerate dehydrogena 22.3 2.2E+02 0.0048 25.7 5.7 62 103-191 147-208 (314)
244 PRK04761 ppnK inorganic polyph 22.1 86 0.0019 27.5 2.9 26 183-208 28-57 (246)
245 PF12146 Hydrolase_4: Putative 22.0 1.7E+02 0.0036 20.5 3.9 40 96-137 8-47 (79)
246 PRK01185 ppnK inorganic polyph 21.5 2E+02 0.0044 25.5 5.2 54 178-249 52-106 (271)
247 PRK14076 pnk inorganic polypho 21.4 2.2E+02 0.0047 28.3 5.9 53 181-249 349-405 (569)
248 PRK05114 hypothetical protein; 21.0 2.3E+02 0.0051 18.8 4.0 16 272-287 27-42 (59)
249 PRK03501 ppnK inorganic polyph 20.8 2.7E+02 0.0058 24.7 5.7 52 183-249 42-98 (264)
250 PRK08978 acetolactate synthase 20.7 7.9E+02 0.017 23.9 11.6 59 184-247 452-513 (548)
251 PRK08979 acetolactate synthase 20.6 8.2E+02 0.018 24.0 11.0 59 184-247 472-533 (572)
252 TIGR02483 PFK_mixed phosphofru 20.4 92 0.002 28.5 2.8 37 175-211 89-128 (324)
253 KOG0069 Glyoxylate/hydroxypyru 20.3 6.4E+02 0.014 23.2 8.2 100 103-243 162-268 (336)
254 TIGR00696 wecB_tagA_cpsF bacte 20.2 3.5E+02 0.0076 22.2 6.1 76 24-115 35-112 (177)
255 cd00763 Bacterial_PFK Phosphof 20.2 92 0.002 28.4 2.8 37 175-211 87-126 (317)
256 PRK03708 ppnK inorganic polyph 20.1 95 0.0021 27.7 2.8 51 183-249 60-113 (277)
257 TIGR03457 sulphoacet_xsc sulfo 20.1 8.3E+02 0.018 24.0 9.7 58 184-247 481-542 (579)
No 1
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=5.3e-58 Score=433.76 Aligned_cols=284 Identities=32% Similarity=0.689 Sum_probs=243.0
Q ss_pred CCCCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhcCCCeEEEccccccCCCCCcccc
Q 022811 1 MSNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLLCRHLPESEF 80 (291)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~ 80 (291)
+|+++.+|||++++..+..+.++..+.+..+.+.+++++|+|||+|||+.+++.++...| ++.|||++........
T Consensus 179 lp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~-v~~iGPl~~~~~~~~~--- 254 (480)
T PLN02555 179 MPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLCP-IKPVGPLFKMAKTPNS--- 254 (480)
T ss_pred CCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCCC-EEEeCcccCccccccc---
Confidence 477999999998764334455667777778888899999999999999999999987655 9999999764221100
Q ss_pred ccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCC--CccccccHHHHH
Q 022811 81 KSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVT--GDSAILSQEFYE 158 (291)
Q Consensus 81 ~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~--~~~~~~~~~~~~ 158 (291)
.....+|..+++|.+|||.+++++||||||||...++.+++.+++.+|+.++++|||+++..... .....+|+++.+
T Consensus 255 -~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~ 333 (480)
T PLN02555 255 -DVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLE 333 (480)
T ss_pred -cccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhcCChhhhh
Confidence 00112234456899999999888999999999999999999999999999999999999843110 011257888988
Q ss_pred HhcCCeEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeC------CC
Q 022811 159 EIKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVN------RD 232 (291)
Q Consensus 159 ~~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~------~~ 232 (291)
+.++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+. ..
T Consensus 334 ~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~ 413 (480)
T PLN02555 334 KAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKL 413 (480)
T ss_pred hcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCc
Confidence 888999999999999999999999999999999999999999999999999999999999988889999993 25
Q ss_pred CCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 022811 233 ASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHY 289 (291)
Q Consensus 233 ~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 289 (291)
+++++|+++|+++|.+++|+.+|+||++|++++++|+++||||++++++||+++++.
T Consensus 414 v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~ 470 (480)
T PLN02555 414 ITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRK 470 (480)
T ss_pred CcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 899999999999999888999999999999999999999999999999999999864
No 2
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.1e-57 Score=429.68 Aligned_cols=276 Identities=34% Similarity=0.635 Sum_probs=236.1
Q ss_pred CCCCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhcC-CCeEEEccccccCCCCCccc
Q 022811 1 MSNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASKS-PNIYTVGPLHLLCRHLPESE 79 (291)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~-p~v~~vGpl~~~~~~~~~~~ 79 (291)
+||++.+|||.+... ..+.+..++... ..+.+++++|+|||+|||+.++++++... +++++|||++......
T Consensus 172 ~~~~~~~dlp~~~~~--~~~~~~~~~~~~-~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~~---- 244 (451)
T PLN02410 172 FHPLRCKDFPVSHWA--SLESIMELYRNT-VDKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASAP---- 244 (451)
T ss_pred CCCCChHHCcchhcC--CcHHHHHHHHHH-hhcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCCC----
Confidence 467888899976542 223344444433 35678999999999999999999998755 5899999998642110
Q ss_pred cccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCC--ccccccHHHH
Q 022811 80 FKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTG--DSAILSQEFY 157 (291)
Q Consensus 80 ~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~--~~~~~~~~~~ 157 (291)
.+++.++.+|.+|||.+++++||||||||...++.+++++++.+|+.++++|||+++.....+ ....+|++|.
T Consensus 245 -----~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~ 319 (451)
T PLN02410 245 -----TSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFS 319 (451)
T ss_pred -----ccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHH
Confidence 112234457999999998899999999999999999999999999999999999998532111 1124799999
Q ss_pred HHhcCCeEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHH
Q 022811 158 EEIKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASRED 237 (291)
Q Consensus 158 ~~~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 237 (291)
++.++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+...+++++
T Consensus 320 er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~ 399 (451)
T PLN02410 320 KIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGA 399 (451)
T ss_pred HhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999778899999977899999
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 022811 238 IAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLH 288 (291)
Q Consensus 238 l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~ 288 (291)
|+++|+++|.+++|++||++|+++++.+++|+++||||++++++||++++.
T Consensus 400 v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 400 VERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 999999999988888999999999999999999999999999999999864
No 3
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=4e-57 Score=426.18 Aligned_cols=275 Identities=29% Similarity=0.533 Sum_probs=233.4
Q ss_pred CCCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHh--cCCCeEEEccccccCCCCCccc
Q 022811 2 SNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIAS--KSPNIYTVGPLHLLCRHLPESE 79 (291)
Q Consensus 2 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~--~~p~v~~vGpl~~~~~~~~~~~ 79 (291)
|+++.+|||+++...+. +..+.+....+.+++++|+|||++||+++++.++. ..|++++|||++.......+
T Consensus 182 ~~l~~~dlp~~~~~~~~----~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~~~~~-- 255 (468)
T PLN02207 182 NPVPANVLPSALFVEDG----YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHP-- 255 (468)
T ss_pred CCCChHHCcchhcCCcc----HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCcccccCCCC--
Confidence 57999999998763222 34455666778899999999999999999999954 56789999999864321110
Q ss_pred cccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHH
Q 022811 80 FKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEE 159 (291)
Q Consensus 80 ~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~ 159 (291)
. ... ..+++|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++.... .....+|++|.++
T Consensus 256 --~--~~~-~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~-~~~~~lp~~f~er 329 (468)
T PLN02207 256 --E--QDL-ARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEV-TNDDLLPEGFLDR 329 (468)
T ss_pred --c--ccc-chhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCc-cccccCCHHHHhh
Confidence 0 001 134579999999988999999999999999999999999999999999999985321 1123588999999
Q ss_pred hcCCeEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeC--------C
Q 022811 160 IKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVN--------R 231 (291)
Q Consensus 160 ~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~--------~ 231 (291)
.++|+.+++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|+|+.+. .
T Consensus 330 ~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~ 409 (468)
T PLN02207 330 VSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDE 409 (468)
T ss_pred cCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999878799999763 1
Q ss_pred CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 022811 232 DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHY 289 (291)
Q Consensus 232 ~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 289 (291)
.+++++|+++|+++|.+ ++++||+||+++++++++|+++||||++++++||++++.-
T Consensus 410 ~v~~e~i~~av~~vm~~-~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~~ 466 (468)
T PLN02207 410 IVNANEIETAIRCVMNK-DNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIGI 466 (468)
T ss_pred cccHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 36999999999999973 4669999999999999999999999999999999999754
No 4
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=8.5e-57 Score=422.41 Aligned_cols=279 Identities=30% Similarity=0.601 Sum_probs=235.9
Q ss_pred CCCCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhcCCCeEEEccccccCC--CCCcc
Q 022811 1 MSNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLLCR--HLPES 78 (291)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~--~~~~~ 78 (291)
+|+++.+|||+++...+..+.++.++.+.++.+.+++++|+|||+|||++++++++.. +++++|||+++... .....
T Consensus 159 ~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~ 237 (449)
T PLN02173 159 LPLLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV-CPVLTIGPTVPSMYLDQQIKS 237 (449)
T ss_pred CCCCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc-CCeeEEcccCchhhccccccc
Confidence 4778999999988754445556677777788889999999999999999999999865 46999999975311 00000
Q ss_pred ccccccCCCC--CCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHH
Q 022811 79 EFKSFRSNLW--KEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEF 156 (291)
Q Consensus 79 ~~~~~~~~~~--~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~ 156 (291)
. ......+| .++++|.+||+.+++++||||||||...++.+++.+++.+| ++.+|+|+++.. ....+|+++
T Consensus 238 ~-~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~----~~~~lp~~~ 310 (449)
T PLN02173 238 D-NDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRAS----EESKLPPGF 310 (449)
T ss_pred c-ccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEecc----chhcccchH
Confidence 0 00011223 23456999999998899999999999999999999999999 678899999853 122478888
Q ss_pred HHHh-cCCeEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC----
Q 022811 157 YEEI-KDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR---- 231 (291)
Q Consensus 157 ~~~~-~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~---- 231 (291)
.++. ++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+..
T Consensus 311 ~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~ 390 (449)
T PLN02173 311 LETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKES 390 (449)
T ss_pred HHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccC
Confidence 8887 57899999999999999999999999999999999999999999999999999999999888899999852
Q ss_pred -CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 022811 232 -DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVL 287 (291)
Q Consensus 232 -~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 287 (291)
.+++++|+++|+++|.+++|+.+|+||+++++++++|+++||||++++++||+++.
T Consensus 391 ~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 391 GIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred CcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 26899999999999998888999999999999999999999999999999999985
No 5
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=2.1e-56 Score=420.23 Aligned_cols=272 Identities=31% Similarity=0.566 Sum_probs=231.9
Q ss_pred CCCCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhc-------CCCeEEEccccccCC
Q 022811 1 MSNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASK-------SPNIYTVGPLHLLCR 73 (291)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~-------~p~v~~vGpl~~~~~ 73 (291)
+|+++.+|||.+++... ...+..+.+..+.+.+++++|+|||+|||+.+++.++.. .+++++|||++....
T Consensus 172 ~p~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~~ 249 (470)
T PLN03015 172 CKPVGPKELMETMLDRS--DQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTNV 249 (470)
T ss_pred CCCCChHHCCHhhcCCC--cHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCCCcc
Confidence 47899999998775422 222344446667789999999999999999999999864 256999999984211
Q ss_pred CCCccccccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCC--------
Q 022811 74 HLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMV-------- 145 (291)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~-------- 145 (291)
. . ..+.+|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++....
T Consensus 250 ~-~------------~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~ 316 (470)
T PLN03015 250 H-V------------EKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSD 316 (470)
T ss_pred c-c------------cchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCcccccccccc
Confidence 0 0 123479999999988999999999999999999999999999999999999974211
Q ss_pred CC-ccccccHHHHHHhcCCeEE-eeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHh
Q 022811 146 TG-DSAILSQEFYEEIKDRGMI-ANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTW 223 (291)
Q Consensus 146 ~~-~~~~~~~~~~~~~~~~~~v-~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~ 223 (291)
.. ....+|++|.++..+++.+ .+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+
T Consensus 317 ~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~ 396 (470)
T PLN03015 317 DDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEI 396 (470)
T ss_pred ccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHh
Confidence 00 1125889999998888865 599999999999999999999999999999999999999999999999999998899
Q ss_pred CcceeeC-----CCCCHHHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 022811 224 GIGMEVN-----RDASREDIAALVKEIMEG--DKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVL 287 (291)
Q Consensus 224 G~G~~l~-----~~~~~~~l~~ai~~vl~~--~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 287 (291)
|+|+.+. ..+++++|+++|+++|.+ ++|+.+|+||+++++++++|+++||||++++++||+++.
T Consensus 397 gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~~~ 467 (470)
T PLN03015 397 GVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKRCY 467 (470)
T ss_pred CeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhcc
Confidence 9999995 258999999999999963 678999999999999999999999999999999998874
No 6
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=6.5e-56 Score=418.86 Aligned_cols=273 Identities=33% Similarity=0.619 Sum_probs=233.2
Q ss_pred CCCCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhc-------CCCeEEEccccccCC
Q 022811 1 MSNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASK-------SPNIYTVGPLHLLCR 73 (291)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~-------~p~v~~vGpl~~~~~ 73 (291)
+|+++.+|||.++.. +.+..+..+.+....+.+++++|+|||+|||+.++++++.. .+++++|||++....
T Consensus 168 ~~~l~~~dlp~~~~~--~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl~~~~~ 245 (481)
T PLN02992 168 CEPVRFEDTLDAYLV--PDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGPLCRPIQ 245 (481)
T ss_pred CCccCHHHhhHhhcC--CCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEecCccCCcC
Confidence 367888899975543 22345666777778888999999999999999999998752 246999999975321
Q ss_pred CCCccccccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCC-------
Q 022811 74 HLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVT------- 146 (291)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~------- 146 (291)
.. .++++|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++.....
T Consensus 246 ~~-------------~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~ 312 (481)
T PLN02992 246 SS-------------KTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYF 312 (481)
T ss_pred CC-------------cchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccc
Confidence 10 1355799999999889999999999999999999999999999999999999742100
Q ss_pred --------C-ccccccHHHHHHhcCCeE-EeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHH
Q 022811 147 --------G-DSAILSQEFYEEIKDRGM-IANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNC 216 (291)
Q Consensus 147 --------~-~~~~~~~~~~~~~~~~~~-v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na 216 (291)
. ....+|++|.++..+++. +.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||
T Consensus 313 ~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na 392 (481)
T PLN02992 313 SANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNA 392 (481)
T ss_pred cCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHH
Confidence 0 012478899999877765 559999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCcceeeCC---CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHh--cCCChHHHHHHHHHHHHh
Q 022811 217 RYASTTWGIGMEVNR---DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATD--VGGASFNNFNKCIKEVLH 288 (291)
Q Consensus 217 ~~v~~~~G~G~~l~~---~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~--~gg~s~~~~~~~v~~l~~ 288 (291)
+++++++|+|+.++. .++.++|.++|+++|.+++|+.+|++++++++.+++|++ +||||++++++||+++++
T Consensus 393 ~~~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~ 469 (481)
T PLN02992 393 ALLSDELGIAVRSDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQR 469 (481)
T ss_pred HHHHHHhCeeEEecCCCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHH
Confidence 999768999999963 489999999999999988888999999999999999995 599999999999999875
No 7
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=1.2e-55 Score=419.41 Aligned_cols=278 Identities=30% Similarity=0.585 Sum_probs=234.6
Q ss_pred CCCCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhc-------CCCeEEEccccccCC
Q 022811 1 MSNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASK-------SPNIYTVGPLHLLCR 73 (291)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~-------~p~v~~vGpl~~~~~ 73 (291)
+|+++.+|||.+++..+ +..+.++....+.+.+++++|+|||+|||+.++++++.. .|+++.|||++....
T Consensus 174 lp~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl~~~~~ 251 (480)
T PLN00164 174 LPPVPASSLPAPVMDKK--SPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTVYPIGPVISLAF 251 (480)
T ss_pred CCCCChHHCCchhcCCC--cHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccCCCCceEEeCCCccccc
Confidence 46789999998776432 233445556667788999999999999999999999864 257999999985321
Q ss_pred CCCccccccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCC-------
Q 022811 74 HLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVT------- 146 (291)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~------- 146 (291)
... .+..+.+|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++.....
T Consensus 252 ~~~----------~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~~ 321 (480)
T PLN00164 252 TPP----------AEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTD 321 (480)
T ss_pred cCC----------CccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccccc
Confidence 100 012456899999999889999999999998999999999999999999999999853210
Q ss_pred -CccccccHHHHHHhcCCeEEe-eccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhC
Q 022811 147 -GDSAILSQEFYEEIKDRGMIA-NWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWG 224 (291)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~~v~-~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G 224 (291)
.....+|++|.++..+++.++ +|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|
T Consensus 322 ~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~g 401 (480)
T PLN00164 322 ADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMG 401 (480)
T ss_pred cchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhC
Confidence 011247889988888777765 999999999999999999999999999999999999999999999999998878899
Q ss_pred cceeeCC------CCCHHHHHHHHHHHHcCC--hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcC
Q 022811 225 IGMEVNR------DASREDIAALVKEIMEGD--KGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHYH 290 (291)
Q Consensus 225 ~G~~l~~------~~~~~~l~~ai~~vl~~~--~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~~ 290 (291)
+|+.+.. .+++++|+++|+++|.++ +|+.+|++|+++++++++++++||||++++++||+++++++
T Consensus 402 vG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~~~~~~~ 475 (480)
T PLN00164 402 VAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLAREIRHGA 475 (480)
T ss_pred eEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcc
Confidence 9999842 368999999999999864 47899999999999999999999999999999999998753
No 8
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=2.7e-55 Score=414.05 Aligned_cols=272 Identities=27% Similarity=0.572 Sum_probs=231.6
Q ss_pred CCCCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHH-----hcCCCeEEEccccccCCCC
Q 022811 1 MSNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIA-----SKSPNIYTVGPLHLLCRHL 75 (291)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~-----~~~p~v~~vGpl~~~~~~~ 75 (291)
+|+++.+|+|++++........+..+.+..+.+.+++++++|||+|||+.+++..+ +..|++++|||++......
T Consensus 171 ~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~iGpl~~~~~~~ 250 (448)
T PLN02562 171 QPLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQIGPLHNQEATT 250 (448)
T ss_pred CCCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEecCcccccccc
Confidence 35688999999876443334456777788888889999999999999999998765 3457899999998643210
Q ss_pred CccccccccCCCCCCChhhHhhhccCCCCceEEEEcCCcc-cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccH
Q 022811 76 PESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSIT-VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQ 154 (291)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~-~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~ 154 (291)
. -....+..+.+|.+|||++++++||||||||.. .++.+++++++.+|++++++|||+++.. ....+++
T Consensus 251 ~------~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~----~~~~l~~ 320 (448)
T PLN02562 251 I------TKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPV----WREGLPP 320 (448)
T ss_pred c------CCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCC----chhhCCH
Confidence 0 001123345679999999988899999999986 6789999999999999999999999753 1124788
Q ss_pred HHHHHhcCCeEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCC
Q 022811 155 EFYEEIKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDAS 234 (291)
Q Consensus 155 ~~~~~~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 234 (291)
+|.++.++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+. .++
T Consensus 321 ~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~-~~~ 399 (448)
T PLN02562 321 GYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS-GFG 399 (448)
T ss_pred HHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC-CCC
Confidence 8988899999999999999999999999999999999999999999999999999999999999976689999985 589
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 022811 235 REDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVL 287 (291)
Q Consensus 235 ~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 287 (291)
+++++++|+++|.++ +||+||++++++++++ .+||||++|+++||++++
T Consensus 400 ~~~l~~~v~~~l~~~---~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 400 QKEVEEGLRKVMEDS---GMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred HHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 999999999999887 8999999999998887 667999999999999874
No 9
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=4.1e-55 Score=413.35 Aligned_cols=281 Identities=28% Similarity=0.550 Sum_probs=229.8
Q ss_pred CCCCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhcCCCeEEEccccccCC-CCCccc
Q 022811 1 MSNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLLCR-HLPESE 79 (291)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~-~~~~~~ 79 (291)
+|+++.+|||++++.... ..+..++.+..+....++++++|||++||+++++.+++. +++++|||+++... ......
T Consensus 166 l~~~~~~dl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~-~~v~~VGPl~~~~~~~~~~~~ 243 (456)
T PLN02210 166 LPLLEVRDLPSFMLPSGG-AHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADL-KPVIPIGPLVSPFLLGDDEEE 243 (456)
T ss_pred CCCCChhhCChhhhcCCc-hHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhc-CCEEEEcccCchhhcCccccc
Confidence 467888999987764222 222233334445667889999999999999999999874 67999999975211 000000
Q ss_pred -cccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHH
Q 022811 80 -FKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYE 158 (291)
Q Consensus 80 -~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~ 158 (291)
.......+|..+++|.+|||.+++++||||||||....+.+++++++.+|+.++++|||+++.... ...+..+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~----~~~~~~~~~ 319 (456)
T PLN02210 244 TLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEK----AQNVQVLQE 319 (456)
T ss_pred ccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCcc----ccchhhHHh
Confidence 000111245567789999999988999999999999889999999999999999999999985311 112344555
Q ss_pred Hh-cCCeEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-----C
Q 022811 159 EI-KDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-----D 232 (291)
Q Consensus 159 ~~-~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-----~ 232 (291)
+. ++++++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+.. .
T Consensus 320 ~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~ 399 (456)
T PLN02210 320 MVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGE 399 (456)
T ss_pred hccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCc
Confidence 55 47888999999999999999999999999999999999999999999999999999999666999999952 5
Q ss_pred CCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 022811 233 ASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVL 287 (291)
Q Consensus 233 ~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 287 (291)
+++++|+++|+++|.+++|+++|+||++|++.+++|+++||||++++++||++++
T Consensus 400 ~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 400 LKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred CCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 8999999999999998888899999999999999999999999999999999985
No 10
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=4.7e-55 Score=411.23 Aligned_cols=282 Identities=28% Similarity=0.541 Sum_probs=231.2
Q ss_pred CCCCCCCCCCcccccCCcchHHHHHHHHHHhhhcC--ccEEEEcCcccccHHHHHHHHhcCCCeEEEccccccCCCCCcc
Q 022811 1 MSNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLE--SSAIIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLLCRHLPES 78 (291)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~ 78 (291)
+|+++.+|||++++..+.++.++.++.+..+.+.. ++++|+|||++||+.++++++. . ++++|||+++........
T Consensus 160 lp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-~-~v~~VGPL~~~~~~~~~~ 237 (455)
T PLN02152 160 LPSLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN-I-EMVAVGPLLPAEIFTGSE 237 (455)
T ss_pred CCCCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc-C-CEEEEcccCccccccccc
Confidence 46789999999887544455556666666665543 5799999999999999999975 2 599999997532100000
Q ss_pred ccccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCC-----Cc---cc
Q 022811 79 EFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVT-----GD---SA 150 (291)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~-----~~---~~ 150 (291)
. .-...++..+.+|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++..... .. ..
T Consensus 238 ~--~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~ 315 (455)
T PLN02152 238 S--GKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEI 315 (455)
T ss_pred c--CccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCccccccccccccccc
Confidence 0 00001123346899999999889999999999999999999999999999999999999853110 00 01
Q ss_pred cccHHHHHHhcCCeEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeC
Q 022811 151 ILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVN 230 (291)
Q Consensus 151 ~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~ 230 (291)
.++++|.++.++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+.
T Consensus 316 ~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~ 395 (455)
T PLN02152 316 EKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVR 395 (455)
T ss_pred ccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEee
Confidence 24688888899999999999999999999999999999999999999999999999999999999999987778888874
Q ss_pred C----CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 022811 231 R----DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVL 287 (291)
Q Consensus 231 ~----~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 287 (291)
. .+++++|+++|+++|+++ +..||+||+++++++++++.+||||++++++||++++
T Consensus 396 ~~~~~~~~~e~l~~av~~vm~~~-~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i~ 455 (455)
T PLN02152 396 ENSEGLVERGEIRRCLEAVMEEK-SVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTLC 455 (455)
T ss_pred cCcCCcCcHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhC
Confidence 2 469999999999999754 5679999999999999999999999999999999874
No 11
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.3e-54 Score=412.73 Aligned_cols=275 Identities=28% Similarity=0.544 Sum_probs=231.0
Q ss_pred CCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhc---CCCeEEEccccccCCCCCccc
Q 022811 3 NMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASK---SPNIYTVGPLHLLCRHLPESE 79 (291)
Q Consensus 3 ~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~---~p~v~~vGpl~~~~~~~~~~~ 79 (291)
+++.+|||.+++... .+..+.+..+.+.+++++|+|||+|||++++++++.. .|++++|||+++...... .
T Consensus 187 ~l~~~dlp~~~~~~~----~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vGpl~~~~~~~~-~- 260 (475)
T PLN02167 187 SVPTKVLPPGLFMKE----SYEAWVEIAERFPEAKGILVNSFTELEPNAFDYFSRLPENYPPVYPVGPILSLKDRTS-P- 260 (475)
T ss_pred CCChhhCchhhhCcc----hHHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHHhhcccCCeeEEeccccccccccC-C-
Confidence 578888887665422 2345556677788999999999999999999999764 478999999986422100 0
Q ss_pred cccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCC--CccccccHHHH
Q 022811 80 FKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVT--GDSAILSQEFY 157 (291)
Q Consensus 80 ~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~--~~~~~~~~~~~ 157 (291)
.+. ...+.+|.+||+.+++++||||||||...++.+++.+++.+|+.++++|||+++..... .....+|++|.
T Consensus 261 --~~~---~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~lp~~~~ 335 (475)
T PLN02167 261 --NLD---SSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFM 335 (475)
T ss_pred --CCC---cchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCcccccchhhhCChHHH
Confidence 000 01235799999999889999999999988899999999999999999999999853110 01224889999
Q ss_pred HHhcCCeEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC------
Q 022811 158 EEIKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR------ 231 (291)
Q Consensus 158 ~~~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~------ 231 (291)
++..+++++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|+|+.+..
T Consensus 336 er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~ 415 (475)
T PLN02167 336 DRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAY 415 (475)
T ss_pred HHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccccc
Confidence 99989999999999999999999999999999999999999999999999999999999876588999998852
Q ss_pred --CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcC
Q 022811 232 --DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHYH 290 (291)
Q Consensus 232 --~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~~ 290 (291)
.+++++|+++|+++|.++ +.||+||+++++.+++++++||||++++++||++++..|
T Consensus 416 ~~~~~~~~l~~av~~~m~~~--~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i~~~~ 474 (475)
T PLN02167 416 GEIVKADEIAGAVRSLMDGE--DVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDLLGDH 474 (475)
T ss_pred CCcccHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcC
Confidence 469999999999999754 279999999999999999999999999999999998876
No 12
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.9e-54 Score=412.07 Aligned_cols=272 Identities=32% Similarity=0.552 Sum_probs=230.3
Q ss_pred CCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHh---cCCCeEEEccccccCCCCCccc
Q 022811 3 NMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIAS---KSPNIYTVGPLHLLCRHLPESE 79 (291)
Q Consensus 3 ~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~---~~p~v~~vGpl~~~~~~~~~~~ 79 (291)
|++.+|||+++.. +.++.++.+..+.+.+++++++|||++||+.+++.++. ..|++++|||++....... .
T Consensus 182 pl~~~dlp~~~~~----~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~-~- 255 (481)
T PLN02554 182 PYPVKCLPSVLLS----KEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLHLENSGD-D- 255 (481)
T ss_pred CCCHHHCCCcccC----HHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCcccccccc-c-
Confidence 7788899987753 13456677777888899999999999999999998875 4578999999953221100 0
Q ss_pred cccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCC----------CCcc
Q 022811 80 FKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMV----------TGDS 149 (291)
Q Consensus 80 ~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~----------~~~~ 149 (291)
. . ...+.+|.+||+++++++||||||||+..++.+++++++.+|+.++++|||+++.... ....
T Consensus 256 ---~--~-~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~ 329 (481)
T PLN02554 256 ---S--K-DEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLE 329 (481)
T ss_pred ---c--c-cccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccccchh
Confidence 0 0 0134579999999988899999999998899999999999999999999999985211 0011
Q ss_pred ccccHHHHHHhcCCeEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceee
Q 022811 150 AILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEV 229 (291)
Q Consensus 150 ~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l 229 (291)
..+|++|.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|+|+.+
T Consensus 330 ~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l 409 (481)
T PLN02554 330 EILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEI 409 (481)
T ss_pred hhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEe
Confidence 23688999999999999999999999999999999999999999999999999999999999999997655889999998
Q ss_pred C------------CCCCHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 022811 230 N------------RDASREDIAALVKEIME-GDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHY 289 (291)
Q Consensus 230 ~------------~~~~~~~l~~ai~~vl~-~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 289 (291)
. ..+++++|+++|+++|. ++ +||+||+++++++++++++||||.+++++||+++++.
T Consensus 410 ~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~---~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~~~ 479 (481)
T PLN02554 410 RKYWRGDLLAGEMETVTAEEIERGIRCLMEQDS---DVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVTKN 479 (481)
T ss_pred eccccccccccccCeEcHHHHHHHHHHHhcCCH---HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhh
Confidence 5 25799999999999997 54 8999999999999999999999999999999999863
No 13
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=5e-54 Score=407.45 Aligned_cols=285 Identities=27% Similarity=0.486 Sum_probs=232.1
Q ss_pred CCCCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhcC--CCeEEEccccccCCCCCcc
Q 022811 1 MSNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASKS--PNIYTVGPLHLLCRHLPES 78 (291)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~--p~v~~vGpl~~~~~~~~~~ 78 (291)
+|+++.+|||.+++.....+.+..++.+.......++++|+|||++||+.+++++++.. +++++|||+++...... .
T Consensus 180 ~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL~~~~~~~~-~ 258 (477)
T PLN02863 180 CPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPILPLSGEKS-G 258 (477)
T ss_pred CCCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCCcccccccc-c
Confidence 35688999998877433344456666666666778899999999999999999998754 67999999975421100 0
Q ss_pred ccccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCC-CccccccHHHH
Q 022811 79 EFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVT-GDSAILSQEFY 157 (291)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~-~~~~~~~~~~~ 157 (291)
. ...+.+.+..+++|.+|||.+++++||||||||...++.+++++++.+|+.++++|||+++..... .....+|++|.
T Consensus 259 ~-~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~lp~~~~ 337 (477)
T PLN02863 259 L-MERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFE 337 (477)
T ss_pred c-cccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccccchhhCCHHHH
Confidence 0 000011111346799999999889999999999999999999999999999999999999843211 11224788888
Q ss_pred HHhcCC-eEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC----C
Q 022811 158 EEIKDR-GMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR----D 232 (291)
Q Consensus 158 ~~~~~~-~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~----~ 232 (291)
++..++ +++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|+|+++.. .
T Consensus 338 ~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~ 417 (477)
T PLN02863 338 DRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTV 417 (477)
T ss_pred HHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCC
Confidence 776554 45669999999999999999999999999999999999999999999999999998788999999942 4
Q ss_pred CCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 022811 233 ASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHY 289 (291)
Q Consensus 233 ~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 289 (291)
++.+++.++|+++|. ++++||+||+++++++++|+++||||.+++++||++++..
T Consensus 418 ~~~~~v~~~v~~~m~--~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~ 472 (477)
T PLN02863 418 PDSDELARVFMESVS--ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVEL 472 (477)
T ss_pred cCHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHh
Confidence 689999999999994 2348999999999999999999999999999999999753
No 14
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=3e-54 Score=405.37 Aligned_cols=263 Identities=34% Similarity=0.599 Sum_probs=222.1
Q ss_pred CCCCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhc--CCCeEEEccccccCCCCCcc
Q 022811 1 MSNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASK--SPNIYTVGPLHLLCRHLPES 78 (291)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~--~p~v~~vGpl~~~~~~~~~~ 78 (291)
+|+++.+|||++++..+ +..+.++.+....+.+++++|+|||+|||+.+++++++. .+++++|||++...... .
T Consensus 176 ~p~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~~~~--~ 251 (451)
T PLN03004 176 VPPMKGSDMPKAVLERD--DEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNGRIE--D 251 (451)
T ss_pred CCCCChHHCchhhcCCc--hHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccCcccc--c
Confidence 46789999999887432 345666777778888999999999999999999999875 35799999997422100 0
Q ss_pred ccccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCC----ccc-ccc
Q 022811 79 EFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTG----DSA-ILS 153 (291)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~----~~~-~~~ 153 (291)
. .. ..+.+|.+|||++++++||||||||...++.+++++|+.+|+.++++|||+++.....+ ... .+|
T Consensus 252 ~------~~-~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~lp 324 (451)
T PLN03004 252 R------ND-NKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLP 324 (451)
T ss_pred c------cc-chhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhhCC
Confidence 0 00 12457999999998899999999999999999999999999999999999998531100 011 378
Q ss_pred HHHHHHhcCCe-EEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-
Q 022811 154 QEFYEEIKDRG-MIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR- 231 (291)
Q Consensus 154 ~~~~~~~~~~~-~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~- 231 (291)
++|.++..+++ ++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|+|+.++.
T Consensus 325 ~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~ 404 (451)
T PLN03004 325 EGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNES 404 (451)
T ss_pred hHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCC
Confidence 89999887655 5669999999999999999999999999999999999999999999999999999777899999963
Q ss_pred ---CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHH
Q 022811 232 ---DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFN 277 (291)
Q Consensus 232 ---~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~ 277 (291)
.+++++|+++|+++|+++ +||+|++++++++++|+++||||++
T Consensus 405 ~~~~~~~e~l~~av~~vm~~~---~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 405 ETGFVSSTEVEKRVQEIIGEC---PVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred cCCccCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 479999999999999987 8999999999999999999999864
No 15
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=1.4e-53 Score=399.94 Aligned_cols=270 Identities=26% Similarity=0.453 Sum_probs=226.0
Q ss_pred CCCCCCCcccc--cCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhcC-CCeEEEccccccCCCCCcccc
Q 022811 4 MRLKDFPSLMR--VTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASKS-PNIYTVGPLHLLCRHLPESEF 80 (291)
Q Consensus 4 ~~~~~lp~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~-p~v~~vGpl~~~~~~~~~~~~ 80 (291)
++.+|+|++.. .....+.+..++.+..+.+.+++++|+|||+|||+.+++++++.. +++++|||+++..... .
T Consensus 166 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~~--~-- 241 (453)
T PLN02764 166 LRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDKT--R-- 241 (453)
T ss_pred CcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCcccc--c--
Confidence 67788887533 222223344555555577788999999999999999999998753 5799999997532110 0
Q ss_pred ccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCC-CccccccHHHHHH
Q 022811 81 KSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVT-GDSAILSQEFYEE 159 (291)
Q Consensus 81 ~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~-~~~~~~~~~~~~~ 159 (291)
..+.+|.+|||++++++||||||||...++.+++.+++.+|+.++.+|+|+++..... .....+|++|.++
T Consensus 242 --------~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r 313 (453)
T PLN02764 242 --------ELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEER 313 (453)
T ss_pred --------cchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhh
Confidence 1245799999999999999999999999999999999999999999999999853211 1123589999999
Q ss_pred hcCCeEEe-eccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC----CCC
Q 022811 160 IKDRGMIA-NWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR----DAS 234 (291)
Q Consensus 160 ~~~~~~v~-~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~----~~~ 234 (291)
..+++.++ +|+||.+||+|+++++|||||||||++||+++|||||+||++.||+.||+++++.+|+|+.+.. .++
T Consensus 314 ~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~ 393 (453)
T PLN02764 314 VKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFS 393 (453)
T ss_pred hccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccC
Confidence 88887765 9999999999999999999999999999999999999999999999999999777899998742 489
Q ss_pred HHHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 022811 235 REDIAALVKEIMEG--DKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHY 289 (291)
Q Consensus 235 ~~~l~~ai~~vl~~--~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 289 (291)
+++|+++|+++|++ ++|+.+|++++++++.+++ +|||.+++++||+++++.
T Consensus 394 ~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~----~GSS~~~l~~lv~~~~~~ 446 (453)
T PLN02764 394 KESLRDAINSVMKRDSEIGNLVKKNHTKWRETLAS----PGLLTGYVDNFIESLQDL 446 (453)
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHh
Confidence 99999999999986 4578899999999999865 899999999999999864
No 16
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=1.8e-53 Score=403.49 Aligned_cols=279 Identities=30% Similarity=0.566 Sum_probs=224.4
Q ss_pred CCCCCCCcccccCCcchHHHHHHHHHHh-hhcCccEEEEcCcccccHHHHHHHHhcC-CCeEEEccccccCCCCCccccc
Q 022811 4 MRLKDFPSLMRVTDANDILFNYMKTEVQ-NCLESSAIIFNTFDEHEGKVLEAIASKS-PNIYTVGPLHLLCRHLPESEFK 81 (291)
Q Consensus 4 ~~~~~lp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ns~~~le~~~l~~~~~~~-p~v~~vGpl~~~~~~~~~~~~~ 81 (291)
++.+|||++++..... ..+.+.+. ....++++|+|||+|||+.++++++... +++++|||++.........
T Consensus 187 l~~~dlp~~~~~~~~~----~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~~~~~~~--- 259 (491)
T PLN02534 187 ITRAQLPGAFVSLPDL----DDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNKRNLDK--- 259 (491)
T ss_pred ccHHHCChhhcCcccH----HHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECcccccccccccc---
Confidence 7888898865432211 22233333 3356889999999999999999998754 5799999997532110000
Q ss_pred cccCCCC-CCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCC-C-ccccccHHHHH
Q 022811 82 SFRSNLW-KEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVT-G-DSAILSQEFYE 158 (291)
Q Consensus 82 ~~~~~~~-~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~-~-~~~~~~~~~~~ 158 (291)
......+ .++++|.+|||.+++++||||||||....+.+++.+++.+|+.++++|||+++.+... . ....+|++|.+
T Consensus 260 ~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~ 339 (491)
T PLN02534 260 FERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEE 339 (491)
T ss_pred cccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHH
Confidence 0000001 1245799999999889999999999999999999999999999999999999843111 1 11135788887
Q ss_pred Hhc-CCeEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeC-------
Q 022811 159 EIK-DRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVN------- 230 (291)
Q Consensus 159 ~~~-~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~------- 230 (291)
+.. .++++.+|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.||+|+++.
T Consensus 340 ~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~ 419 (491)
T PLN02534 340 RIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRW 419 (491)
T ss_pred hhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccc
Confidence 754 455567999999999999999999999999999999999999999999999999999999999999873
Q ss_pred ------C-CCCHHHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 022811 231 ------R-DASREDIAALVKEIME--GDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHY 289 (291)
Q Consensus 231 ------~-~~~~~~l~~ai~~vl~--~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 289 (291)
. .+++++|+++|+++|. +++|+++|+||+++++++++|+++||||++++++||++++++
T Consensus 420 ~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~~ 487 (491)
T PLN02534 420 GDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLKQ 487 (491)
T ss_pred cccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 1 2789999999999997 567889999999999999999999999999999999999864
No 17
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=9.9e-53 Score=396.76 Aligned_cols=276 Identities=27% Similarity=0.414 Sum_probs=224.9
Q ss_pred CCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhcC-CCeEEEccccccCCCCCcccccc
Q 022811 4 MRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASKS-PNIYTVGPLHLLCRHLPESEFKS 82 (291)
Q Consensus 4 ~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~-p~v~~vGpl~~~~~~~~~~~~~~ 82 (291)
++.+|||+++...+.....+..+.+....+.+++++|+|||+|||+.++++++... +++++|||+++......... .
T Consensus 182 ~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~~~~~~~~~~--~ 259 (472)
T PLN02670 182 FRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPPVIEDDEEDD--T 259 (472)
T ss_pred ccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCcccccccccc--c
Confidence 45678998775433332333444465667788999999999999999999998753 57999999975311100000 0
Q ss_pred ccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCC--CccccccHHHHHHh
Q 022811 83 FRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVT--GDSAILSQEFYEEI 160 (291)
Q Consensus 83 ~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~--~~~~~~~~~~~~~~ 160 (291)
. .. ..+++|.+|||++++++||||||||...++.+++.+++.+|+.++++|||+++..... .....+|++|.++.
T Consensus 260 ~--~~-~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~ 336 (472)
T PLN02670 260 I--DV-KGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERV 336 (472)
T ss_pred c--cc-chhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcCChHHHHhc
Confidence 0 00 0125799999999889999999999999999999999999999999999999853111 11235899999998
Q ss_pred cCCeEE-eeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-----CCC
Q 022811 161 KDRGMI-ANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-----DAS 234 (291)
Q Consensus 161 ~~~~~v-~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-----~~~ 234 (291)
.+++.+ .+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++ +++|+|+.+.. .++
T Consensus 337 ~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v-~~~g~Gv~l~~~~~~~~~~ 415 (472)
T PLN02670 337 KGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLL-HGKKLGLEVPRDERDGSFT 415 (472)
T ss_pred cCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHH-HHcCeeEEeeccccCCcCc
Confidence 888876 59999999999999999999999999999999999999999999999999999 67899999953 389
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 022811 235 REDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHY 289 (291)
Q Consensus 235 ~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 289 (291)
+++|+++|+++|.+++|++||+||+++++.+++ .+...+.+++++++|.+.
T Consensus 416 ~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~----~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 416 SDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGD----MDRNNRYVDELVHYLREN 466 (472)
T ss_pred HHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhC----cchhHHHHHHHHHHHHHh
Confidence 999999999999988888999999999999987 466678899999988764
No 18
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=2.1e-52 Score=392.96 Aligned_cols=266 Identities=25% Similarity=0.441 Sum_probs=218.5
Q ss_pred CCCCCCCcccccCCcchHHHHHHHHHH-hhhcCccEEEEcCcccccHHHHHHHHhc-CCCeEEEccccccCCCCCccccc
Q 022811 4 MRLKDFPSLMRVTDANDILFNYMKTEV-QNCLESSAIIFNTFDEHEGKVLEAIASK-SPNIYTVGPLHLLCRHLPESEFK 81 (291)
Q Consensus 4 ~~~~~lp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ns~~~le~~~l~~~~~~-~p~v~~vGpl~~~~~~~~~~~~~ 81 (291)
++.+|+|.+ . ..+.++..+.+.+ +.+.+++++|+|||+|||+.++++++.. .|++++|||+++......
T Consensus 165 ~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~~~~----- 235 (442)
T PLN02208 165 FRENDAHAL-A---TLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDTSK----- 235 (442)
T ss_pred cCHHHcCcc-c---ccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcCCCC-----
Confidence 456777764 1 1223344444333 5677899999999999999999998764 478999999986421000
Q ss_pred cccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCC-CccccccHHHHHHh
Q 022811 82 SFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVT-GDSAILSQEFYEEI 160 (291)
Q Consensus 82 ~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~-~~~~~~~~~~~~~~ 160 (291)
..+.+|.+|||.+++++||||||||...++.+++.+++.+++.++.+|+|+++.+... .....+|++|.++.
T Consensus 236 -------~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~ 308 (442)
T PLN02208 236 -------PLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERV 308 (442)
T ss_pred -------CCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHH
Confidence 1245799999999889999999999999999999999999988999999999854111 11235889999887
Q ss_pred cCCeE-EeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-C---CCH
Q 022811 161 KDRGM-IANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-D---ASR 235 (291)
Q Consensus 161 ~~~~~-v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~---~~~ 235 (291)
.+++. +.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+.. . +++
T Consensus 309 ~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~ 388 (442)
T PLN02208 309 KGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSK 388 (442)
T ss_pred hcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcH
Confidence 65554 559999999999999999999999999999999999999999999999999988777999999964 2 899
Q ss_pred HHHHHHHHHHHcCC--hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 022811 236 EDIAALVKEIMEGD--KGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHY 289 (291)
Q Consensus 236 ~~l~~ai~~vl~~~--~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 289 (291)
++|+++|+++|+++ +|+.+|++++++++.+.+ +|||++++++||+++++.
T Consensus 389 ~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~~----~gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 389 ESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILVS----PGLLTGYVDKFVEELQEY 440 (442)
T ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHhc----CCcHHHHHHHHHHHHHHh
Confidence 99999999999764 478899999999999743 789999999999999753
No 19
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=5.2e-52 Score=393.70 Aligned_cols=273 Identities=33% Similarity=0.579 Sum_probs=227.4
Q ss_pred CCCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhcC-CCeEEEccccccCCCCCcccc
Q 022811 2 SNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASKS-PNIYTVGPLHLLCRHLPESEF 80 (291)
Q Consensus 2 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~-p~v~~vGpl~~~~~~~~~~~~ 80 (291)
|+++.+|||.++... ...++..+.+.+..+.+++.+++|||+|||+.+++++++.. +++++|||+.+........
T Consensus 177 ~~l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP~~~~~~~~~~~-- 252 (459)
T PLN02448 177 SSTRLSDLPPIFHGN--SRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSIPYMELKDNS-- 252 (459)
T ss_pred CCCChHHCchhhcCC--chHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEecCcccccccCCCc--
Confidence 567888899876542 33445666777777888999999999999999999998764 4799999997532110000
Q ss_pred ccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHh
Q 022811 81 KSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEI 160 (291)
Q Consensus 81 ~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~ 160 (291)
... .....+.+|..||+.++++++|||||||....+.+++++++.+|+.++++|||+++.. ..++.++.
T Consensus 253 ~~~--~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~---------~~~~~~~~ 321 (459)
T PLN02448 253 SSS--NNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE---------ASRLKEIC 321 (459)
T ss_pred ccc--ccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc---------hhhHhHhc
Confidence 000 0001234799999998889999999999988889999999999999999999988633 12344445
Q ss_pred cCCeEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC------CCC
Q 022811 161 KDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR------DAS 234 (291)
Q Consensus 161 ~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~------~~~ 234 (291)
++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+.. .++
T Consensus 322 ~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~ 401 (459)
T PLN02448 322 GDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVG 401 (459)
T ss_pred cCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCc
Confidence 57899999999999999999999999999999999999999999999999999999999777899999852 479
Q ss_pred HHHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 022811 235 REDIAALVKEIMEG--DKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHY 289 (291)
Q Consensus 235 ~~~l~~ai~~vl~~--~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 289 (291)
+++|+++|+++|.+ ++|++||+||+++++++++++++||||++++++||+++++.
T Consensus 402 ~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~~ 458 (459)
T PLN02448 402 REEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQG 458 (459)
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcc
Confidence 99999999999986 46789999999999999999999999999999999999864
No 20
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=9.7e-52 Score=393.86 Aligned_cols=269 Identities=32% Similarity=0.561 Sum_probs=222.5
Q ss_pred hHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhcC-CCeEEEccccccCCCCCccccccccCCCCCCChhhHhhh
Q 022811 20 DILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASKS-PNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWL 98 (291)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~-p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl 98 (291)
..+..++.+..+.+.+++++++|||++||+++++++++.. .++++|||+........... ..+.+.+..+.+|.+||
T Consensus 202 ~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~--~~~~~~~~~~~~~~~wL 279 (482)
T PLN03007 202 SPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEKA--ERGKKANIDEQECLKWL 279 (482)
T ss_pred hhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEcccccccccccccc--ccCCccccchhHHHHHH
Confidence 4456667676677889999999999999999999998765 47999999875322100000 00111122356799999
Q ss_pred ccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCC-CccccccHHHHHHhc-CCeEEeeccCccccc
Q 022811 99 NEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVT-GDSAILSQEFYEEIK-DRGMIANWCPQDKVL 176 (291)
Q Consensus 99 ~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~-~~~~~~~~~~~~~~~-~~~~v~~w~pq~~iL 176 (291)
+.+++++||||||||....+.+++.+++.+|+.++++|||+++..... .....+|++|.++.. .|+++.+|+||.+||
T Consensus 280 d~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL 359 (482)
T PLN03007 280 DSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLIL 359 (482)
T ss_pred hcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHHh
Confidence 999889999999999998889999999999999999999999854211 111247888888764 556677999999999
Q ss_pred CCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeC---------CCCCHHHHHHHHHHHHc
Q 022811 177 SHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVN---------RDASREDIAALVKEIME 247 (291)
Q Consensus 177 ~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~---------~~~~~~~l~~ai~~vl~ 247 (291)
+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+++|+.+. ..+++++|+++|+++|.
T Consensus 360 ~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~ 439 (482)
T PLN03007 360 DHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIV 439 (482)
T ss_pred ccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999877677776652 25799999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcC
Q 022811 248 GDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHYH 290 (291)
Q Consensus 248 ~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~~ 290 (291)
+++|++||+||+++++.+++|+.+||||++++++||+++++.+
T Consensus 440 ~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~~~ 482 (482)
T PLN03007 440 GEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELNSRK 482 (482)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcC
Confidence 9889999999999999999999999999999999999998753
No 21
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=7.7e-51 Score=382.77 Aligned_cols=251 Identities=26% Similarity=0.416 Sum_probs=211.9
Q ss_pred HHHHHHhhhcCccEEEEcCcccccHHHHHHHHhcC-CCeEEEccccccCCCCCccccccccCCCCCCChhhHhhhccCCC
Q 022811 25 YMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASKS-PNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEP 103 (291)
Q Consensus 25 ~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~-p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~ 103 (291)
.+.+..+.+.+++++|+|||+|||+.++++++... +++++|||+++..... . . ...+++|.+|||.+++
T Consensus 182 ~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~--~-----~---~~~~~~~~~WLD~q~~ 251 (446)
T PLN00414 182 LFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNK--S-----G---KPLEDRWNHWLNGFEP 251 (446)
T ss_pred HHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccc--c-----C---cccHHHHHHHHhcCCC
Confidence 44555667788999999999999999999998754 5799999997532110 0 0 0124579999999999
Q ss_pred CceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCC-CccccccHHHHHHhcCCeEEe-eccCcccccCCCCc
Q 022811 104 NSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVT-GDSAILSQEFYEEIKDRGMIA-NWCPQDKVLSHPSV 181 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~-~w~pq~~iL~h~~v 181 (291)
+|||||||||...++.+++.+++.+|+.++.+|+|+++..... .....+|++|.++..+++.++ +|+||..||+|+++
T Consensus 252 ~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v 331 (446)
T PLN00414 252 GSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSV 331 (446)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCcc
Confidence 9999999999999999999999999999999999999863211 112358999999998888875 89999999999999
Q ss_pred ceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC----CCCHHHHHHHHHHHHcCC--hHHHHH
Q 022811 182 SVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR----DASREDIAALVKEIMEGD--KGKLIR 255 (291)
Q Consensus 182 ~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~----~~~~~~l~~ai~~vl~~~--~~~~~r 255 (291)
++|||||||||++||+++|||||+||++.||+.||+++++++|+|+.+.. .+++++|+++|+++|.++ +|+.+|
T Consensus 332 ~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r 411 (446)
T PLN00414 332 GCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVK 411 (446)
T ss_pred ceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHH
Confidence 99999999999999999999999999999999999999778999999953 389999999999999763 467899
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 022811 256 QNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHY 289 (291)
Q Consensus 256 ~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 289 (291)
++++++++.+ +++||+| ..+++||+++++.
T Consensus 412 ~~a~~~~~~~---~~~gg~s-s~l~~~v~~~~~~ 441 (446)
T PLN00414 412 RNHKKLKETL---VSPGLLS-GYADKFVEALENE 441 (446)
T ss_pred HHHHHHHHHH---HcCCCcH-HHHHHHHHHHHHh
Confidence 9999999986 4567744 3489999999764
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=6.9e-40 Score=313.46 Aligned_cols=223 Identities=21% Similarity=0.317 Sum_probs=188.4
Q ss_pred hhhcCccEEEEcCcccccHHHHHHHHhcCCCeEEEccccccCCCCCccccccccCCCCCCChhhHhhhccCCCCceEEEE
Q 022811 31 QNCLESSAIIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVN 110 (291)
Q Consensus 31 ~~~~~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs 110 (291)
+..++++++|+||.+.||++ |+.+|++++|||++....... ..++++.+|++.. ++++||||
T Consensus 241 ~l~~~~~l~lvns~~~~d~~-----rp~~p~v~~vGgi~~~~~~~~------------~l~~~l~~fl~~~-~~g~V~vS 302 (507)
T PHA03392 241 ELRNRVQLLFVNVHPVFDNN-----RPVPPSVQYLGGLHLHKKPPQ------------PLDDYLEEFLNNS-TNGVVYVS 302 (507)
T ss_pred HHHhCCcEEEEecCccccCC-----CCCCCCeeeecccccCCCCCC------------CCCHHHHHHHhcC-CCcEEEEE
Confidence 33456789999999888877 999999999999987431110 1355788999876 46899999
Q ss_pred cCCcc---cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcceEEec
Q 022811 111 YGSIT---VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVFLTH 187 (291)
Q Consensus 111 ~GS~~---~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~fItH 187 (291)
|||.. .++.+.++.+++++++.+++|||+++... .+ ...|+|+++.+|+||.+||+|+.+++||||
T Consensus 303 ~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~-------~~----~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItH 371 (507)
T PHA03392 303 FGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEV-------EA----INLPANVLTQKWFPQRAVLKHKNVKAFVTQ 371 (507)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCc-------Cc----ccCCCceEEecCCCHHHHhcCCCCCEEEec
Confidence 99986 35788999999999999999999987431 11 124689999999999999999999999999
Q ss_pred CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 022811 188 GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAE 266 (291)
Q Consensus 188 gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~ 266 (291)
||+||++||+++|||||++|+++||+.||+++ ++.|+|+.++. .++.++|.++|+++|+|+ +|++||+++++.++
T Consensus 372 GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv-~~~G~G~~l~~~~~t~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~ 447 (507)
T PHA03392 372 GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKY-VELGIGRALDTVTVSAAQLVLAIVDVIENP---KYRKNLKELRHLIR 447 (507)
T ss_pred CCcccHHHHHHcCCCEEECCCCccHHHHHHHH-HHcCcEEEeccCCcCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 67899999986 789999999999999998 99999999999998
Q ss_pred HHHhcCCChHHHHHHHHHHHHhc
Q 022811 267 AATDVGGASFNNFNKCIKEVLHY 289 (291)
Q Consensus 267 ~a~~~gg~s~~~~~~~v~~l~~~ 289 (291)
+. .-+..+.+..+++.+.+.
T Consensus 448 ~~---p~~~~~~av~~iE~v~r~ 467 (507)
T PHA03392 448 HQ---PMTPLHKAIWYTEHVIRN 467 (507)
T ss_pred hC---CCCHHHHHHHHHHHHHhC
Confidence 73 223456677888877654
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=1.6e-41 Score=326.13 Aligned_cols=217 Identities=26% Similarity=0.477 Sum_probs=158.4
Q ss_pred cCccEEEEcCcccccHHHHHHHHhcCCCeEEEccccccCCCCCccccccccCCCCCCChhhHhhhccCCCCceEEEEcCC
Q 022811 34 LESSAIIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGS 113 (291)
Q Consensus 34 ~~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS 113 (291)
.+++++++|+.+.+|.+ ||.+|++++||+++.....+ .+.++..|++...++++|||||||
T Consensus 225 ~~~~l~l~ns~~~ld~p-----rp~~p~v~~vGgl~~~~~~~--------------l~~~~~~~~~~~~~~~vv~vsfGs 285 (500)
T PF00201_consen 225 SNASLVLINSHPSLDFP-----RPLLPNVVEVGGLHIKPAKP--------------LPEELWNFLDSSGKKGVVYVSFGS 285 (500)
T ss_dssp HHHHHCCSSTEEE---------HHHHCTSTTGCGC-S----T--------------CHHHHHHHTSTTTTTEEEEEE-TS
T ss_pred HHHHHHhhhccccCcCC-----cchhhcccccCccccccccc--------------cccccchhhhccCCCCEEEEecCc
Confidence 44678999999887766 89999999999998754322 234677899875678999999999
Q ss_pred ccc-CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcceEEecCCchh
Q 022811 114 ITV-MTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNS 192 (291)
Q Consensus 114 ~~~-~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S 192 (291)
... ++.+..++++++|++.+++|||++++. .+. .+++|+++.+|+||.+||+||++++||||||+||
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~--------~~~----~l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s 353 (500)
T PF00201_consen 286 IVSSMPEEKLKEIAEAFENLPQRFIWKYEGE--------PPE----NLPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNS 353 (500)
T ss_dssp SSTT-HHHHHHHHHHHHHCSTTEEEEEETCS--------HGC----HHHTTEEEESS--HHHHHTSTTEEEEEES--HHH
T ss_pred ccchhHHHHHHHHHHHHhhCCCccccccccc--------ccc----cccceEEEeccccchhhhhcccceeeeeccccch
Confidence 974 455668999999999999999999743 111 2468999999999999999999999999999999
Q ss_pred HHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhc
Q 022811 193 ILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDV 271 (291)
Q Consensus 193 ~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~ 271 (291)
++||+++|||||++|+++||+.||+++ ++.|+|+.++. .++.+++.++|+++|+|+ +|++||++++.+++....
T Consensus 354 ~~Ea~~~gvP~l~~P~~~DQ~~na~~~-~~~G~g~~l~~~~~~~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~~~p~- 428 (500)
T PF00201_consen 354 TQEALYHGVPMLGIPLFGDQPRNAARV-EEKGVGVVLDKNDLTEEELRAAIREVLENP---SYKENAKRLSSLFRDRPI- 428 (500)
T ss_dssp HHHHHHCT--EEE-GCSTTHHHHHHHH-HHTTSEEEEGGGC-SHHHHHHHHHHHHHSH---HHHHHHHHHHHTTT-----
T ss_pred hhhhhhccCCccCCCCcccCCccceEE-EEEeeEEEEEecCCcHHHHHHHHHHHHhhh---HHHHHHHHHHHHHhcCCC-
Confidence 999999999999999999999999999 67899999985 899999999999999999 999999999999987421
Q ss_pred CCChHHHHHHHHHHHHh
Q 022811 272 GGASFNNFNKCIKEVLH 288 (291)
Q Consensus 272 gg~s~~~~~~~v~~l~~ 288 (291)
+..+.+..+||.+.+
T Consensus 429 --~p~~~~~~~ie~v~~ 443 (500)
T PF00201_consen 429 --SPLERAVWWIEYVAR 443 (500)
T ss_dssp -----------------
T ss_pred --CHHHHHHHHHHHHHh
Confidence 234445666665544
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=1.6e-35 Score=284.01 Aligned_cols=208 Identities=32% Similarity=0.582 Sum_probs=162.8
Q ss_pred CccEEEEcCcccccHHHHHHHHhcCCCeEEEccccccCCCCCccccccccCCCCCCChhhHhhhccCCCC--ceEEEEcC
Q 022811 35 ESSAIIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEPN--SVAYVNYG 112 (291)
Q Consensus 35 ~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~--~vvyvs~G 112 (291)
+++..++|+.+-++.. .++..+++++|||++...... .+..+.+|++..+.. +|||||||
T Consensus 224 ~~~~~~ln~~~~~~~~----~~~~~~~v~~IG~l~~~~~~~--------------~~~~~~~wl~~~~~~~~~vvyvSfG 285 (496)
T KOG1192|consen 224 NASFIFLNSNPLLDFE----PRPLLPKVIPIGPLHVKDSKQ--------------KSPLPLEWLDILDESRHSVVYISFG 285 (496)
T ss_pred cCeEEEEccCcccCCC----CCCCCCCceEECcEEecCccc--------------cccccHHHHHHHhhccCCeEEEECC
Confidence 3445555555443331 244568999999999862211 111467899877665 99999999
Q ss_pred Ccc---cCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccc-cCCCCcceEEec
Q 022811 113 SIT---VMTDEQMKEFAWGLANS-GHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKV-LSHPSVSVFLTH 187 (291)
Q Consensus 113 S~~---~~~~~~~~~i~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~i-L~h~~v~~fItH 187 (291)
|++ .++.++..+++.+++.+ +++|+|+++.... ..+++++.++-++|+...+|+||.++ |.|+++++||||
T Consensus 286 S~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~----~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTH 361 (496)
T KOG1192|consen 286 SMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDS----IYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTH 361 (496)
T ss_pred cccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcc----hhhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEEC
Confidence 998 79999999999999999 8899999986421 11223322111357888899999998 699999999999
Q ss_pred CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Q 022811 188 GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEA 267 (291)
Q Consensus 188 gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 267 (291)
|||||++|++++|||||++|+++||+.||++++++.++++....+.+...+..++.+++.++ +|+++++++++..+.
T Consensus 362 gG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~~---~y~~~~~~l~~~~~~ 438 (496)
T KOG1192|consen 362 GGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILENE---EYKEAAKRLSEILRD 438 (496)
T ss_pred CcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcCh---HHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999766566666655566666999999999999 999999999998864
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.96 E-value=9.3e-28 Score=223.99 Aligned_cols=206 Identities=18% Similarity=0.276 Sum_probs=162.2
Q ss_pred EEEcCcccccHHHHHHHHhcCCCeEEEccccccCCCCCccccccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCC
Q 022811 39 IIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMT 118 (291)
Q Consensus 39 ~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~ 118 (291)
.+..+.+.|+++ ...+++++++|||+...... ...|.....++++|||||||.....
T Consensus 183 ~l~~~~~~l~~~----~~~~~~~~~~~Gp~~~~~~~-------------------~~~~~~~~~~~~~v~vs~Gs~~~~~ 239 (392)
T TIGR01426 183 NLVYTPKAFQPA----GETFDDSFTFVGPCIGDRKE-------------------DGSWERPGDGRPVVLISLGTVFNNQ 239 (392)
T ss_pred EEEeCChHhCCC----ccccCCCeEEECCCCCCccc-------------------cCCCCCCCCCCCEEEEecCccCCCC
Confidence 455555445443 12345689999998753211 1136666667899999999986656
Q ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcceEEecCCchhHHHHHh
Q 022811 119 DEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVC 198 (291)
Q Consensus 119 ~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~ 198 (291)
...++.+++++.+.+++++|..+.... ...+ ...++|+.+.+|+||.++|.++++ ||||||+||++||++
T Consensus 240 ~~~~~~~~~al~~~~~~~i~~~g~~~~-------~~~~-~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~ 309 (392)
T TIGR01426 240 PSFYRTCVEAFRDLDWHVVLSVGRGVD-------PADL-GELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALF 309 (392)
T ss_pred HHHHHHHHHHHhcCCCeEEEEECCCCC-------hhHh-ccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHH
Confidence 678899999999999999998864311 1111 224689999999999999999887 999999999999999
Q ss_pred cCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHH
Q 022811 199 GGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFN 277 (291)
Q Consensus 199 ~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~ 277 (291)
+|+|+|++|...||+.||+++ ++.|+|+.+.. .++.++|.++|+++|+|+ +|+++++++++.++.. +| ..
T Consensus 310 ~G~P~v~~p~~~dq~~~a~~l-~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~---~~~~~~~~l~~~~~~~---~~--~~ 380 (392)
T TIGR01426 310 NGVPMVAVPQGADQPMTARRI-AELGLGRHLPPEEVTAEKLREAVLAVLSDP---RYAERLRKMRAEIREA---GG--AR 380 (392)
T ss_pred hCCCEEecCCcccHHHHHHHH-HHCCCEEEeccccCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHc---CC--HH
Confidence 999999999999999999999 67899999875 789999999999999998 8999999999998863 33 34
Q ss_pred HHHHHHHHH
Q 022811 278 NFNKCIKEV 286 (291)
Q Consensus 278 ~~~~~v~~l 286 (291)
.+.++|+.+
T Consensus 381 ~aa~~i~~~ 389 (392)
T TIGR01426 381 RAADEIEGF 389 (392)
T ss_pred HHHHHHHHh
Confidence 556666554
No 26
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.95 E-value=2.5e-27 Score=221.40 Aligned_cols=165 Identities=19% Similarity=0.298 Sum_probs=145.7
Q ss_pred CCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCc
Q 022811 102 EPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSV 181 (291)
Q Consensus 102 ~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v 181 (291)
.++++||+|+||.... .+.++.+++++.+.+.+||....... . -....+.|+++.+|+||..+|.++++
T Consensus 235 ~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~~-------~---~~~~~p~n~~v~~~~p~~~~l~~ad~ 303 (406)
T COG1819 235 ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGAR-------D---TLVNVPDNVIVADYVPQLELLPRADA 303 (406)
T ss_pred CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEeccccc-------c---ccccCCCceEEecCCCHHHHhhhcCE
Confidence 3578999999999865 88899999999999999999886410 0 11235789999999999999999999
Q ss_pred ceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCChHHHHHHHHHH
Q 022811 182 SVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGDKGKLIRQNVQD 260 (291)
Q Consensus 182 ~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~r~~a~~ 260 (291)
||||||+||++|||++|||+|++|...||+.||.++ ++.|+|+.+.. .++.+.++++|+++|+++ .|++++++
T Consensus 304 --vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rv-e~~G~G~~l~~~~l~~~~l~~av~~vL~~~---~~~~~~~~ 377 (406)
T COG1819 304 --VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERV-EELGAGIALPFEELTEERLRAAVNEVLADD---SYRRAAER 377 (406)
T ss_pred --EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHH-HHcCCceecCcccCCHHHHHHHHHHHhcCH---HHHHHHHH
Confidence 999999999999999999999999999999999999 78899999986 799999999999999999 99999999
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 022811 261 WRKKAEAATDVGGASFNNFNKCIKEVLH 288 (291)
Q Consensus 261 l~~~~~~a~~~gg~s~~~~~~~v~~l~~ 288 (291)
+++.+++. +| .+.+.+.++++..
T Consensus 378 ~~~~~~~~---~g--~~~~a~~le~~~~ 400 (406)
T COG1819 378 LAEEFKEE---DG--PAKAADLLEEFAR 400 (406)
T ss_pred HHHHhhhc---cc--HHHHHHHHHHHHh
Confidence 99999885 44 6668888888654
No 27
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.93 E-value=2.8e-25 Score=207.63 Aligned_cols=171 Identities=19% Similarity=0.340 Sum_probs=137.8
Q ss_pred ChhhHhhhccCCCCceEEEEcCCcccC-CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeec
Q 022811 91 DPECLKWLNEKEPNSVAYVNYGSITVM-TDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANW 169 (291)
Q Consensus 91 ~~~~~~wl~~~~~~~vvyvs~GS~~~~-~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w 169 (291)
+.++..|++. .+++|||+|||.... .......+++++...+.+++|+++.... .. ...++|+++.+|
T Consensus 228 ~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~-------~~---~~~~~~v~~~~~ 295 (401)
T cd03784 228 PPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGL-------GA---EDLPDNVRVVDF 295 (401)
T ss_pred CHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccc-------cc---cCCCCceEEeCC
Confidence 4466778865 478999999999753 4567788999999889999999875411 00 124689999999
Q ss_pred cCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcC
Q 022811 170 CPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEG 248 (291)
Q Consensus 170 ~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~ 248 (291)
+||..+|.++++ ||||||+||++|++++|||+|++|+..||+.||+++ ++.|+|+.+.. .++.++|.++|++++++
T Consensus 296 ~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~-~~~G~g~~l~~~~~~~~~l~~al~~~l~~ 372 (401)
T cd03784 296 VPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARV-AELGAGPALDPRELTAERLAAALRRLLDP 372 (401)
T ss_pred CCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHH-HHCCCCCCCCcccCCHHHHHHHHHHHhCH
Confidence 999999999888 999999999999999999999999999999999999 77899999875 67999999999999985
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 022811 249 DKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKE 285 (291)
Q Consensus 249 ~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~ 285 (291)
+ ++++++++++.+++. +| ...+.++|+.
T Consensus 373 ~----~~~~~~~~~~~~~~~---~g--~~~~~~~ie~ 400 (401)
T cd03784 373 P----SRRRAAALLRRIREE---DG--VPSAADVIER 400 (401)
T ss_pred H----HHHHHHHHHHHHHhc---cC--HHHHHHHHhh
Confidence 4 556666666666442 33 4556666654
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.63 E-value=7.9e-15 Score=135.13 Aligned_cols=144 Identities=14% Similarity=0.159 Sum_probs=106.5
Q ss_pred CCCceEEEEcCCcccCCH-HHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeecc-Ccc-cccCC
Q 022811 102 EPNSVAYVNYGSITVMTD-EQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWC-PQD-KVLSH 178 (291)
Q Consensus 102 ~~~~vvyvs~GS~~~~~~-~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~-pq~-~iL~h 178 (291)
+++++|+|..||++.... +.+.+++..+.. +.+++|+++.+. +... .... .+..+.+|+ ++. .++.+
T Consensus 183 ~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~-------~~~~-~~~~-~~~~~~~f~~~~m~~~~~~ 252 (352)
T PRK12446 183 RKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGN-------LDDS-LQNK-EGYRQFEYVHGELPDILAI 252 (352)
T ss_pred CCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCch-------HHHH-Hhhc-CCcEEecchhhhHHHHHHh
Confidence 457899999999985433 444555555433 478999988541 1111 1111 345566777 544 58999
Q ss_pred CCcceEEecCCchhHHHHHhcCCCeeecccc-----cchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCChHH
Q 022811 179 PSVSVFLTHGGWNSILESVCGGVPIICWPFF-----AEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGDKGK 252 (291)
Q Consensus 179 ~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~-----~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~ 252 (291)
+++ +|||||.+|+.|++++|+|+|++|+. .||..||+.+ +..|+|..+.. +++.+.|.+++.++++|++
T Consensus 253 adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l-~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~-- 327 (352)
T PRK12446 253 TDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESF-ERQGYASVLYEEDVTVNSLIKHVEELSHNNE-- 327 (352)
T ss_pred CCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHH-HHCCCEEEcchhcCCHHHHHHHHHHHHcCHH--
Confidence 998 99999999999999999999999984 4899999999 66799999864 7899999999999998752
Q ss_pred HHHHHHHH
Q 022811 253 LIRQNVQD 260 (291)
Q Consensus 253 ~~r~~a~~ 260 (291)
.|++++++
T Consensus 328 ~~~~~~~~ 335 (352)
T PRK12446 328 KYKTALKK 335 (352)
T ss_pred HHHHHHHH
Confidence 45554444
No 29
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.55 E-value=8.7e-14 Score=127.73 Aligned_cols=146 Identities=17% Similarity=0.236 Sum_probs=110.8
Q ss_pred CCceEEEEcCCcccCC-HHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhc-CC-eEEeeccCccc-ccCC
Q 022811 103 PNSVAYVNYGSITVMT-DEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIK-DR-GMIANWCPQDK-VLSH 178 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~-~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~-~~-~~v~~w~pq~~-iL~h 178 (291)
++++|+|..||++... .+.+.++...+.+ .+++++..+.+. .+....... .+ ..+.+|.+++. +|..
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~--------~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ 252 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND--------LEELKSAYNELGVVRVLPFIDDMAALLAA 252 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch--------HHHHHHHHhhcCcEEEeeHHhhHHHHHHh
Confidence 5789999999997433 3556666666655 678888887551 122222222 22 67789998776 8988
Q ss_pred CCcceEEecCCchhHHHHHhcCCCeeeccc-cc---chhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCChH-H
Q 022811 179 PSVSVFLTHGGWNSILESVCGGVPIICWPF-FA---EQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGDKG-K 252 (291)
Q Consensus 179 ~~v~~fItHgG~~S~~Eal~~GvP~i~~P~-~~---DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~-~ 252 (291)
+++ +||++|.+|+.|.+++|+|+|.+|+ .+ ||..||..+ ++.|.|..++. +++.+.+.+.|.+++++++. +
T Consensus 253 ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l-~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~ 329 (357)
T COG0707 253 ADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFL-EKAGAALVIRQSELTPEKLAELILRLLSNPEKLK 329 (357)
T ss_pred ccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHH-HhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHH
Confidence 898 9999999999999999999999998 33 899999999 67899999986 78999999999999987522 3
Q ss_pred HHHHHHHH
Q 022811 253 LIRQNVQD 260 (291)
Q Consensus 253 ~~r~~a~~ 260 (291)
.|++++++
T Consensus 330 ~m~~~a~~ 337 (357)
T COG0707 330 AMAENAKK 337 (357)
T ss_pred HHHHHHHh
Confidence 34444443
No 30
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.52 E-value=6.7e-16 Score=127.37 Aligned_cols=136 Identities=15% Similarity=0.234 Sum_probs=93.5
Q ss_pred eEEEEcCCcccCC-HHHHHHHHHHHHh--CCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCc-ccccCCCCc
Q 022811 106 VAYVNYGSITVMT-DEQMKEFAWGLAN--SGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQ-DKVLSHPSV 181 (291)
Q Consensus 106 vvyvs~GS~~~~~-~~~~~~i~~~l~~--~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq-~~iL~h~~v 181 (291)
+|+|+.||.+... ...+..+...+.. ..++|+++++.... ......+ ...+.++.+.+|.++ ..++..+++
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~----~~~~~~~-~~~~~~v~~~~~~~~m~~~m~~aDl 75 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNY----EELKIKV-ENFNPNVKVFGFVDNMAELMAAADL 75 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCEC----HHHCCCH-CCTTCCCEEECSSSSHHHHHHHHSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcH----HHHHHHH-hccCCcEEEEechhhHHHHHHHcCE
Confidence 4899999986321 1122223333332 24788888875511 1111111 111257889999994 459999998
Q ss_pred ceEEecCCchhHHHHHhcCCCeeeccccc----chhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCC
Q 022811 182 SVFLTHGGWNSILESVCGGVPIICWPFFA----EQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGD 249 (291)
Q Consensus 182 ~~fItHgG~~S~~Eal~~GvP~i~~P~~~----DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~ 249 (291)
+|||||.+|++|++++|+|+|++|... +|..||..+ ++.|+|+.+.. ..+.+.|.++|.+++.++
T Consensus 76 --vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~-~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~ 145 (167)
T PF04101_consen 76 --VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKEL-AKKGAAIMLDESELNPEELAEAIEELLSDP 145 (167)
T ss_dssp --EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHH-HHCCCCCCSECCC-SCCCHHHHHHCHCCCH
T ss_pred --EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHH-HHcCCccccCcccCCHHHHHHHHHHHHcCc
Confidence 999999999999999999999999988 999999999 56799999875 566889999999999876
No 31
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.42 E-value=7.4e-13 Score=119.92 Aligned_cols=121 Identities=18% Similarity=0.343 Sum_probs=95.7
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHhCC-CCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeecc-C-cccccCCC
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLANSG-HPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWC-P-QDKVLSHP 179 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~-~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~-p-q~~iL~h~ 179 (291)
+++.|+|+||..... .++++++..+ ++|++. +... . +...+|+.+..|. + -.++|..+
T Consensus 191 ~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~--------~----~~~~~ni~~~~~~~~~~~~~m~~a 251 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNA--------A----DPRPGNIHVRPFSTPDFAELMAAA 251 (318)
T ss_pred CCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCc--------c----cccCCCEEEeecChHHHHHHHHhC
Confidence 457899999988632 5566666655 676665 4331 0 0125788888876 3 44588888
Q ss_pred CcceEEecCCchhHHHHHhcCCCeeeccc--ccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHH
Q 022811 180 SVSVFLTHGGWNSILESVCGGVPIICWPF--FAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEI 245 (291)
Q Consensus 180 ~v~~fItHgG~~S~~Eal~~GvP~i~~P~--~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~v 245 (291)
++ +|||||+||++|++++|+|+|++|. +.||..||+.+ +++|+|+.+.. +++++.|.++|+++
T Consensus 252 d~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l-~~~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 252 DL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKL-EELGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred CE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHH-HHCCCeEEcccccCCHHHHHHHHhcC
Confidence 88 9999999999999999999999999 78999999999 78899999974 88999999998763
No 32
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.39 E-value=1.5e-12 Score=118.45 Aligned_cols=123 Identities=16% Similarity=0.220 Sum_probs=87.0
Q ss_pred CceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccC--cccccCCCCc
Q 022811 104 NSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCP--QDKVLSHPSV 181 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~p--q~~iL~h~~v 181 (291)
++.|+|.+|+... ..+++++.+.+. +.|++.... .... ..++|+.+.+|.| ....|..+++
T Consensus 188 ~~~iLv~~g~~~~------~~l~~~l~~~~~-~~~i~~~~~------~~~~----~~~~~v~~~~~~~~~~~~~l~~ad~ 250 (321)
T TIGR00661 188 EDYILVYIGFEYR------YKILELLGKIAN-VKFVCYSYE------VAKN----SYNENVEIRRITTDNFKELIKNAEL 250 (321)
T ss_pred CCcEEEECCcCCH------HHHHHHHHhCCC-eEEEEeCCC------CCcc----ccCCCEEEEECChHHHHHHHHhCCE
Confidence 4678888888642 345666766553 233322211 0111 2357899899997 3347777777
Q ss_pred ceEEecCCchhHHHHHhcCCCeeeccccc--chhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCC
Q 022811 182 SVFLTHGGWNSILESVCGGVPIICWPFFA--EQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGD 249 (291)
Q Consensus 182 ~~fItHgG~~S~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~ 249 (291)
+|||||++|+.|++++|+|+|++|... ||..||+.+ ++.|+|+.++. ++ ++.+++.++++++
T Consensus 251 --vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l-~~~g~~~~l~~~~~---~~~~~~~~~~~~~ 315 (321)
T TIGR00661 251 --VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKL-EDLGCGIALEYKEL---RLLEAILDIRNMK 315 (321)
T ss_pred --EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHH-HHCCCEEEcChhhH---HHHHHHHhccccc
Confidence 999999999999999999999999854 899999999 67899999874 22 5555666666665
No 33
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.27 E-value=8.4e-11 Score=108.23 Aligned_cols=92 Identities=15% Similarity=0.266 Sum_probs=77.4
Q ss_pred CeEEeeccCc-ccccCCCCcceEEecCCchhHHHHHhcCCCeeeccc----ccchhHHHHHHHHHhCcceeeCC-CCCHH
Q 022811 163 RGMIANWCPQ-DKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPF----FAEQQTNCRYASTTWGIGMEVNR-DASRE 236 (291)
Q Consensus 163 ~~~v~~w~pq-~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~----~~DQ~~na~~v~~~~G~G~~l~~-~~~~~ 236 (291)
++.+.+|+.+ .++|..+++ +|+|+|.++++||+++|+|+|++|. ..+|..|+..+ .+.|.|..+.. +++.+
T Consensus 236 ~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i-~~~~~g~~~~~~~~~~~ 312 (357)
T PRK00726 236 NAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARAL-VDAGAALLIPQSDLTPE 312 (357)
T ss_pred cEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHH-HHCCCEEEEEcccCCHH
Confidence 3677899854 469999998 9999999999999999999999997 46899999999 56799999874 56799
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHH
Q 022811 237 DIAALVKEIMEGDKGKLIRQNVQD 260 (291)
Q Consensus 237 ~l~~ai~~vl~~~~~~~~r~~a~~ 260 (291)
.+.++|.++++|+ .+++.+.+
T Consensus 313 ~l~~~i~~ll~~~---~~~~~~~~ 333 (357)
T PRK00726 313 KLAEKLLELLSDP---ERLEAMAE 333 (357)
T ss_pred HHHHHHHHHHcCH---HHHHHHHH
Confidence 9999999999988 55554443
No 34
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.23 E-value=1e-09 Score=102.02 Aligned_cols=133 Identities=18% Similarity=0.284 Sum_probs=96.6
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCccccccHHHH---HHhcCCeEEeeccCcc-cccC
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLANS-GHPFLWIVRPDMVTGDSAILSQEFY---EEIKDRGMIANWCPQD-KVLS 177 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~w~pq~-~iL~ 177 (291)
++++|++..|+.... ..+..+++++.+. +.+++++.+.+. .+-+.+. ...++++.+.+|+++. .++.
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~------~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~ 272 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNE------ALKQSLEDLQETNPDALKVFGYVENIDELFR 272 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCH------HHHHHHHHHHhcCCCcEEEEechhhHHHHHH
Confidence 456788877887532 2345566666543 467777665331 1112221 2233578889999875 5999
Q ss_pred CCCcceEEecCCchhHHHHHhcCCCeeec-ccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 178 HPSVSVFLTHGGWNSILESVCGGVPIICW-PFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 178 h~~v~~fItHgG~~S~~Eal~~GvP~i~~-P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.+++ ||+..|..|+.||+++|+|+|+. |..+.|..|+..+ +..|+|+... +.+++.++|.++++|+
T Consensus 273 ~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~-~~~G~~~~~~---~~~~l~~~i~~ll~~~ 339 (380)
T PRK13609 273 VTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYF-ERKGAAVVIR---DDEEVFAKTEALLQDD 339 (380)
T ss_pred hccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHH-HhCCcEEEEC---CHHHHHHHHHHHHCCH
Confidence 9998 99999989999999999999995 6667778899888 5668887653 6899999999999887
No 35
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.17 E-value=5.7e-10 Score=104.38 Aligned_cols=133 Identities=14% Similarity=0.254 Sum_probs=96.2
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHh--CCCCEEEEEcCCCCCCccccccHHHHHH--hcCCeEEeeccCccc-ccC
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLAN--SGHPFLWIVRPDMVTGDSAILSQEFYEE--IKDRGMIANWCPQDK-VLS 177 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~--~~~~~lw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~w~pq~~-iL~ 177 (291)
++++|++..|+.+. ...+..+++++.+ .+.+++++.+.+. .+-+.+... ..+++.+.+|+++.. ++.
T Consensus 201 ~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~~------~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~ 272 (391)
T PRK13608 201 DKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKSK------ELKRSLTAKFKSNENVLILGYTKHMNEWMA 272 (391)
T ss_pred CCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCCH------HHHHHHHHHhccCCCeEEEeccchHHHHHH
Confidence 46788888898862 1334445555332 2456766665431 111222221 235788889997664 899
Q ss_pred CCCcceEEecCCchhHHHHHhcCCCeeec-ccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 178 HPSVSVFLTHGGWNSILESVCGGVPIICW-PFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 178 h~~v~~fItHgG~~S~~Eal~~GvP~i~~-P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.+++ ||+..|..|+.||+++|+|+|+. |..++|..|+..+ ++.|+|+... +.+++.++|.++++|+
T Consensus 273 ~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~-~~~G~g~~~~---~~~~l~~~i~~ll~~~ 339 (391)
T PRK13608 273 SSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYF-EEKGFGKIAD---TPEEAIKIVASLTNGN 339 (391)
T ss_pred hhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHH-HhCCcEEEeC---CHHHHHHHHHHHhcCH
Confidence 9998 99999889999999999999998 7666777899988 6779998764 7889999999999877
No 36
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.16 E-value=3.8e-10 Score=103.24 Aligned_cols=139 Identities=17% Similarity=0.176 Sum_probs=96.6
Q ss_pred CCceEEEEcCCcccCCH-HHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccC-cccccCCCC
Q 022811 103 PNSVAYVNYGSITVMTD-EQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCP-QDKVLSHPS 180 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~-~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~p-q~~iL~h~~ 180 (291)
++.+|++..|+...... +.+.+.+..+.+.+..+++.++.. ..+.+.+.. +...+|+.+.+|.. ...+|..++
T Consensus 180 ~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g----~~~~l~~~~-~~~~~~v~~~g~~~~~~~~l~~ad 254 (350)
T cd03785 180 GKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKG----DLEEVKKAY-EELGVNYEVFPFIDDMAAAYAAAD 254 (350)
T ss_pred CCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCc----cHHHHHHHH-hccCCCeEEeehhhhHHHHHHhcC
Confidence 45567676676643221 223344444543445566676643 111121111 11246888999983 445898888
Q ss_pred cceEEecCCchhHHHHHhcCCCeeeccc----ccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCC
Q 022811 181 VSVFLTHGGWNSILESVCGGVPIICWPF----FAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGD 249 (291)
Q Consensus 181 v~~fItHgG~~S~~Eal~~GvP~i~~P~----~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~ 249 (291)
+ +|+++|.++++||+++|+|+|+.|. ..+|..|+..+ .+.|.|..+.. ..+.+++.++|+++++++
T Consensus 255 ~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l-~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~ 325 (350)
T cd03785 255 L--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARAL-VKAGAAVLIPQEELTPERLAAALLELLSDP 325 (350)
T ss_pred E--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHH-HhCCCEEEEecCCCCHHHHHHHHHHHhcCH
Confidence 8 9999999999999999999999986 46788999988 45699999875 368999999999999876
No 37
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.14 E-value=1e-08 Score=95.54 Aligned_cols=135 Identities=19% Similarity=0.184 Sum_probs=92.8
Q ss_pred CCCceEEEEcCCcccCCH-HHHHHHHHHHH-----hCCCCEEEEEcCCCCCCccccccHHHHHH-hcCCeEEeeccCccc
Q 022811 102 EPNSVAYVNYGSITVMTD-EQMKEFAWGLA-----NSGHPFLWIVRPDMVTGDSAILSQEFYEE-IKDRGMIANWCPQDK 174 (291)
Q Consensus 102 ~~~~vvyvs~GS~~~~~~-~~~~~i~~~l~-----~~~~~~lw~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~w~pq~~ 174 (291)
+++++|++..|+...... ..++.+...+. ..+.+++++++.+. .+-+.+.+. ...++.+.+|+++..
T Consensus 204 ~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~------~~~~~L~~~~~~~~v~~~G~~~~~~ 277 (382)
T PLN02605 204 EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK------KLQSKLESRDWKIPVKVRGFVTNME 277 (382)
T ss_pred CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH------HHHHHHHhhcccCCeEEEeccccHH
Confidence 346677777777653222 22333332221 23356677776441 111222111 134677889998765
Q ss_pred -ccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchh-HHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcC
Q 022811 175 -VLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQ-TNCRYASTTWGIGMEVNRDASREDIAALVKEIMEG 248 (291)
Q Consensus 175 -iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~-~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 248 (291)
++..+++ ||+.+|.+|+.||+++|+|+|+.+....|. .|+..+ .+.|.|+.+ -+.+++.++|.+++.+
T Consensus 278 ~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i-~~~g~g~~~---~~~~~la~~i~~ll~~ 347 (382)
T PLN02605 278 EWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYV-VDNGFGAFS---ESPKEIARIVAEWFGD 347 (382)
T ss_pred HHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHH-HhCCceeec---CCHHHHHHHHHHHHcC
Confidence 8988898 999999999999999999999998766665 689888 456998865 4789999999999987
No 38
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.96 E-value=4.7e-08 Score=91.62 Aligned_cols=182 Identities=15% Similarity=0.091 Sum_probs=109.7
Q ss_pred cCccEEEEcCcccccHHHHHHHHhcCCCeEEEc-cccccCCCCCccccccccCCCCCCChhhHhhhccCCCCceEEEEcC
Q 022811 34 LESSAIIFNTFDEHEGKVLEAIASKSPNIYTVG-PLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYG 112 (291)
Q Consensus 34 ~~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~G 112 (291)
+.|+.+++.+- ...++++...-++.+|| |+....... .. . . + .+++++|.+--|
T Consensus 159 ~~a~~v~~~~~-----~t~~~l~~~g~k~~~vGnPv~d~l~~~--------------~~-~--~-l--~~~~~~lllLpG 213 (396)
T TIGR03492 159 RRCLAVFVRDR-----LTARDLRRQGVRASYLGNPMMDGLEPP--------------ER-K--P-L--LTGRFRIALLPG 213 (396)
T ss_pred hhhCEEeCCCH-----HHHHHHHHCCCeEEEeCcCHHhcCccc--------------cc-c--c-c--CCCCCEEEEECC
Confidence 45777777772 33344455444799999 444221100 00 0 1 1 223568889999
Q ss_pred CcccCCHHHHHHHHHHHHh----CCCCEEEEEcCCCCCCccccccHHHHH-Hh--------------cCCeEEeeccCc-
Q 022811 113 SITVMTDEQMKEFAWGLAN----SGHPFLWIVRPDMVTGDSAILSQEFYE-EI--------------KDRGMIANWCPQ- 172 (291)
Q Consensus 113 S~~~~~~~~~~~i~~~l~~----~~~~~lw~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~v~~w~pq- 172 (291)
|........+..+++++.. .+..|++.+.+... ...+-..+.+ .. .+++.+..+..+
T Consensus 214 SR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~---~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 290 (396)
T TIGR03492 214 SRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLS---LEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAF 290 (396)
T ss_pred CCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCC---HHHHHHHHHhcCceecCCccccchhhccCceEEEechHhH
Confidence 9863333333444444433 35788888743210 0111111110 00 012444455444
Q ss_pred ccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHh----CcceeeCCCCCHHHHHHHHHHHHcC
Q 022811 173 DKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTW----GIGMEVNRDASREDIAALVKEIMEG 248 (291)
Q Consensus 173 ~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~----G~G~~l~~~~~~~~l~~ai~~vl~~ 248 (291)
..++..+++ +||.+|..| .|+.+.|+|+|.+|+-..|. |+... +.. |.++.+. ..+.+.+.+++.++++|
T Consensus 291 ~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~-~~~~~l~g~~~~l~-~~~~~~l~~~l~~ll~d 364 (396)
T TIGR03492 291 AEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFA-EAQSRLLGGSVFLA-SKNPEQAAQVVRQLLAD 364 (396)
T ss_pred HHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHH-HhhHhhcCCEEecC-CCCHHHHHHHHHHHHcC
Confidence 358989998 999999777 99999999999999877786 98766 442 6666654 35569999999999988
Q ss_pred C
Q 022811 249 D 249 (291)
Q Consensus 249 ~ 249 (291)
+
T Consensus 365 ~ 365 (396)
T TIGR03492 365 P 365 (396)
T ss_pred H
Confidence 7
No 39
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.90 E-value=1.7e-08 Score=92.27 Aligned_cols=75 Identities=16% Similarity=0.352 Sum_probs=64.4
Q ss_pred cccccCCCCcceEEecCCchhHHHHHhcCCCeeecccc---cchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHc
Q 022811 172 QDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFF---AEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIME 247 (291)
Q Consensus 172 q~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~---~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~ 247 (291)
-..+|..+++ +|+++|.++++||+++|+|+|+.|.- .+|..|+..+ ...+.|..+.. +.+.+++.+++.++++
T Consensus 244 ~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i-~~~~~G~~~~~~~~~~~~l~~~i~~ll~ 320 (348)
T TIGR01133 244 MAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFL-EDLGAGLVIRQKELLPEKLLEALLKLLL 320 (348)
T ss_pred HHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHH-HHCCCEEEEecccCCHHHHHHHHHHHHc
Confidence 4458989998 99999988999999999999999863 4688899888 56799998864 4579999999999998
Q ss_pred CC
Q 022811 248 GD 249 (291)
Q Consensus 248 ~~ 249 (291)
|+
T Consensus 321 ~~ 322 (348)
T TIGR01133 321 DP 322 (348)
T ss_pred CH
Confidence 87
No 40
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.80 E-value=2e-08 Score=89.67 Aligned_cols=103 Identities=13% Similarity=0.115 Sum_probs=76.2
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHHh--CCCCEEEEEcCCCCCCccccccHHHHHH--hcCCeEEeeccCcc-cccCCC
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLAN--SGHPFLWIVRPDMVTGDSAILSQEFYEE--IKDRGMIANWCPQD-KVLSHP 179 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~~--~~~~~lw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~w~pq~-~iL~h~ 179 (291)
+.|+|+||...... ....++++|.+ .+.++.++++.... ..+.+... ...|+.+..++++. .+|..+
T Consensus 171 ~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~~------~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~a 242 (279)
T TIGR03590 171 RRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSNP------NLDELKKFAKEYPNIILFIDVENMAELMNEA 242 (279)
T ss_pred CeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCCc------CHHHHHHHHHhCCCEEEEeCHHHHHHHHHHC
Confidence 57899998665322 34555666654 34677788875421 11222221 24588899999987 599999
Q ss_pred CcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHH
Q 022811 180 SVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRY 218 (291)
Q Consensus 180 ~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~ 218 (291)
++ +||+|| +|++|+++.|+|+|++|...+|..||+.
T Consensus 243 Dl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 243 DL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred CE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 99 999999 9999999999999999999999999974
No 41
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.77 E-value=1.1e-07 Score=88.81 Aligned_cols=168 Identities=11% Similarity=0.014 Sum_probs=103.7
Q ss_pred CCCceEEEEcCCcccCCHHHHHHHHHHHHh---C--CCCEEEEEcCCCCCCccccccHHHHHHhc--CCeEEeeccCccc
Q 022811 102 EPNSVAYVNYGSITVMTDEQMKEFAWGLAN---S--GHPFLWIVRPDMVTGDSAILSQEFYEEIK--DRGMIANWCPQDK 174 (291)
Q Consensus 102 ~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~---~--~~~~lw~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~w~pq~~ 174 (291)
+++++|.+..||....-......+++++.. . +.++++...... ....+ +.+..... .++.+..+ +...
T Consensus 189 ~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~---~~~~~-~~~~~~~~~~~~v~~~~~-~~~~ 263 (385)
T TIGR00215 189 HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK---RRLQF-EQIKAEYGPDLQLHLIDG-DARK 263 (385)
T ss_pred CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch---hHHHH-HHHHHHhCCCCcEEEECc-hHHH
Confidence 356788888899864323344444444332 2 334555443221 00011 11222221 22333322 2335
Q ss_pred ccCCCCcceEEecCCchhHHHHHhcCCCeeec----cccc---------chhHHHHHHHHHhCcceeeC-CCCCHHHHHH
Q 022811 175 VLSHPSVSVFLTHGGWNSILESVCGGVPIICW----PFFA---------EQQTNCRYASTTWGIGMEVN-RDASREDIAA 240 (291)
Q Consensus 175 iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~----P~~~---------DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~ 240 (291)
+++.+++ +|+-+|..|+ |++++|+|+|++ |+.. .|..|+..+ ...++...+. .+.+++.|.+
T Consensus 264 ~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil-~~~~~~pel~q~~~~~~~l~~ 339 (385)
T TIGR00215 264 AMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNIL-ANRLLVPELLQEECTPHPLAI 339 (385)
T ss_pred HHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHh-cCCccchhhcCCCCCHHHHHH
Confidence 8888888 9999999988 999999999999 8732 277789888 4457777765 4899999999
Q ss_pred HHHHHHcCC----hH-HHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 022811 241 LVKEIMEGD----KG-KLIRQNVQDWRKKAEAATDVGGASFNNFNKC 282 (291)
Q Consensus 241 ai~~vl~~~----~~-~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~ 282 (291)
.+.++++|+ +. +.+++...++.+.+ .++|.+.+....+
T Consensus 340 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~a~~i 382 (385)
T TIGR00215 340 ALLLLLENGLKAYKEMHRERQFFEELRQRI----YCNADSERAAQAV 382 (385)
T ss_pred HHHHHhcCCcccHHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHH
Confidence 999999987 53 55666666665555 3455555544333
No 42
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.76 E-value=1.7e-07 Score=86.88 Aligned_cols=85 Identities=11% Similarity=0.107 Sum_probs=54.9
Q ss_pred ccccCCCCcceEEecCCchhHHHHHhcCCCeeeccccc--------chhHH-H----HHHHHHhCcceeeC-CCCCHHHH
Q 022811 173 DKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFA--------EQQTN-C----RYASTTWGIGMEVN-RDASREDI 238 (291)
Q Consensus 173 ~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~--------DQ~~n-a----~~v~~~~G~G~~l~-~~~~~~~l 238 (291)
..+++.+++ +|+.+|.+++ |++++|+|+|+.|-.. +|..| + ..+ ...+++..+. ...+++.+
T Consensus 256 ~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l 331 (380)
T PRK00025 256 REAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLL-AGRELVPELLQEEATPEKL 331 (380)
T ss_pred HHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHh-cCCCcchhhcCCCCCHHHH
Confidence 348888998 9999998887 9999999999985431 12222 1 222 1112222222 36789999
Q ss_pred HHHHHHHHcCChH-HHHHHHHHHH
Q 022811 239 AALVKEIMEGDKG-KLIRQNVQDW 261 (291)
Q Consensus 239 ~~ai~~vl~~~~~-~~~r~~a~~l 261 (291)
.+++.++++|++. ++++++++++
T Consensus 332 ~~~i~~ll~~~~~~~~~~~~~~~~ 355 (380)
T PRK00025 332 ARALLPLLADGARRQALLEGFTEL 355 (380)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHH
Confidence 9999999998832 3344444333
No 43
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.72 E-value=9.2e-07 Score=79.39 Aligned_cols=183 Identities=12% Similarity=0.086 Sum_probs=121.3
Q ss_pred ccEEEEcCcccccHHHHHH--HHhcCCCeEEEccccccCCCCCccccccccCCCCCCChhhHhhhccCCCCceEEEEcCC
Q 022811 36 SSAIIFNTFDEHEGKVLEA--IASKSPNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGS 113 (291)
Q Consensus 36 ~~~~l~ns~~~le~~~l~~--~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS 113 (291)
-|.|++-..+++-.+.-++ ......++.|+|-+... -...+ .+ |... +++.-|+||-|-
T Consensus 168 yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~-~~~~~-----~p------------~~~~-pE~~~Ilvs~GG 228 (400)
T COG4671 168 YDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRS-LPHLP-----LP------------PHEA-PEGFDILVSVGG 228 (400)
T ss_pred heEEEEecCccccChhhcCCccHhhhhheeEeEEeecc-CcCCC-----CC------------CcCC-CccceEEEecCC
Confidence 4788888876655442211 12233479999988221 11110 00 1111 344568888776
Q ss_pred cccCCHHHHHHHHHHHHh-CCCC--EEEEEcCCCCCCccccccHHHHH----Hhc--CCeEEeeccCccc-ccCCCCcce
Q 022811 114 ITVMTDEQMKEFAWGLAN-SGHP--FLWIVRPDMVTGDSAILSQEFYE----EIK--DRGMIANWCPQDK-VLSHPSVSV 183 (291)
Q Consensus 114 ~~~~~~~~~~~i~~~l~~-~~~~--~lw~~~~~~~~~~~~~~~~~~~~----~~~--~~~~v~~w~pq~~-iL~h~~v~~ 183 (291)
.. ...+.+...+.+-.- .+.+ .+.++++. +|....+ ..+ +++.+..|-.+.. ++..++.
T Consensus 229 G~-dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~--------MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~-- 297 (400)
T COG4671 229 GA-DGAELIETALAAAQLLAGLNHKWLIVTGPF--------MPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL-- 297 (400)
T ss_pred Ch-hhHHHHHHHHHHhhhCCCCCcceEEEeCCC--------CCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--
Confidence 54 234555555555433 3333 44445544 4443322 223 6778888877664 8888887
Q ss_pred EEecCCchhHHHHHhcCCCeeecccc---cchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCC
Q 022811 184 FLTHGGWNSILESVCGGVPIICWPFF---AEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGD 249 (291)
Q Consensus 184 fItHgG~~S~~Eal~~GvP~i~~P~~---~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~ 249 (291)
+|+-||+||++|-+.+|+|.+++|.. -+|-.-|.++ +++|+--.+.+ ++++..+.++|...+..+
T Consensus 298 vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl-~~LGL~dvL~pe~lt~~~La~al~~~l~~P 366 (400)
T COG4671 298 VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRL-EELGLVDVLLPENLTPQNLADALKAALARP 366 (400)
T ss_pred eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHH-HhcCcceeeCcccCChHHHHHHHHhcccCC
Confidence 99999999999999999999999985 4899999999 78998777765 899999999999998743
No 44
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.40 E-value=9.3e-05 Score=66.81 Aligned_cols=129 Identities=12% Similarity=0.112 Sum_probs=84.3
Q ss_pred CceEEEEcCCccc-CCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCccc---ccCC
Q 022811 104 NSVAYVNYGSITV-MTDEQMKEFAWGLANS-GHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDK---VLSH 178 (291)
Q Consensus 104 ~~vvyvs~GS~~~-~~~~~~~~i~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~---iL~h 178 (291)
++.+++..|+... ...+.+.+++..+... +..++++ +... ....+. ....++.+.+|+++.+ ++..
T Consensus 196 ~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~-G~~~-------~~~~~~-~~~~~v~~~g~~~~~~~~~~~~~ 266 (364)
T cd03814 196 DRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIV-GDGP-------ARARLE-ARYPNVHFLGFLDGEELAAAYAS 266 (364)
T ss_pred CCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEE-eCCc-------hHHHHh-ccCCcEEEEeccCHHHHHHHHHh
Confidence 3456677777642 2334444555554432 3455444 3221 011111 2357888999988765 7888
Q ss_pred CCcceEEecCC----chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 179 PSVSVFLTHGG----WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 179 ~~v~~fItHgG----~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
+++ +|..+. .++++||+++|+|+|+.+..+ +...+ +..+.|..+. ..+.+++.++|.+++.++
T Consensus 267 ~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i-~~~~~g~~~~-~~~~~~l~~~i~~l~~~~ 333 (364)
T cd03814 267 ADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIV-TDGENGLLVE-PGDAEAFAAALAALLADP 333 (364)
T ss_pred CCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhh-cCCcceEEcC-CCCHHHHHHHHHHHHcCH
Confidence 888 776654 478999999999999988643 44445 4457888775 457788999999999987
No 45
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=98.22 E-value=0.00023 Score=66.93 Aligned_cols=111 Identities=15% Similarity=0.200 Sum_probs=71.9
Q ss_pred CCeEEeeccCccc---ccCCCCcceEEecCC----chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCC
Q 022811 162 DRGMIANWCPQDK---VLSHPSVSVFLTHGG----WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDAS 234 (291)
Q Consensus 162 ~~~~v~~w~pq~~---iL~h~~v~~fItHgG----~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 234 (291)
+++.+.+|+++.+ ++..+++.+||...- .++++||+++|+|+|+-... .....+ +.-+.|..+....+
T Consensus 289 ~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vg----g~~e~i-~~~~~G~l~~~~~~ 363 (407)
T cd04946 289 ISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVG----GTPEIV-DNGGNGLLLSKDPT 363 (407)
T ss_pred ceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCC----CcHHHh-cCCCcEEEeCCCCC
Confidence 4677889999764 555544445775543 56899999999999986543 344555 55347888865567
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 022811 235 REDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCI 283 (291)
Q Consensus 235 ~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v 283 (291)
.+++.++|.++++|++ .+ .++++..++.+.+.=+...+..+|+
T Consensus 364 ~~~la~~I~~ll~~~~---~~---~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 364 PNELVSSLSKFIDNEE---EY---QTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHHhCHH---HH---HHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 8999999999998772 22 2233334443333444455555443
No 46
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.16 E-value=0.00039 Score=65.59 Aligned_cols=81 Identities=17% Similarity=0.191 Sum_probs=57.2
Q ss_pred cccCCCCcceEEec-----CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcC
Q 022811 174 KVLSHPSVSVFLTH-----GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEG 248 (291)
Q Consensus 174 ~iL~h~~v~~fItH-----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 248 (291)
.+++.+++ ++.. +|..+++||+++|+|+|+-|...++......+ ...|.++... +.+++.++|.++++|
T Consensus 315 ~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~-~~~g~~~~~~---d~~~La~~l~~ll~~ 388 (425)
T PRK05749 315 LLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL-LQAGAAIQVE---DAEDLAKAVTYLLTD 388 (425)
T ss_pred HHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH-HHCCCeEEEC---CHHHHHHHHHHHhcC
Confidence 37778887 3321 34446999999999999999888887777666 4446665543 789999999999998
Q ss_pred ChH-HHHHHHHHH
Q 022811 249 DKG-KLIRQNVQD 260 (291)
Q Consensus 249 ~~~-~~~r~~a~~ 260 (291)
++. +.|.+++++
T Consensus 389 ~~~~~~m~~~a~~ 401 (425)
T PRK05749 389 PDARQAYGEAGVA 401 (425)
T ss_pred HHHHHHHHHHHHH
Confidence 732 334444433
No 47
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.13 E-value=0.0014 Score=58.33 Aligned_cols=82 Identities=17% Similarity=0.302 Sum_probs=61.6
Q ss_pred hcCCeEEeeccCccc---ccCCCCcceEEe----cCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCC
Q 022811 160 IKDRGMIANWCPQDK---VLSHPSVSVFLT----HGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRD 232 (291)
Q Consensus 160 ~~~~~~v~~w~pq~~---iL~h~~v~~fIt----HgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 232 (291)
.+.++.+.+++++.+ ++..+++ +|. -|..+++.||+++|+|+|+.+. ......+ +.-+.|..+. .
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~-~~~~~g~~~~-~ 325 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVV-EDGETGLLVP-P 325 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHh-cCCcceEEeC-C
Confidence 357888899997554 7888888 552 2456789999999999999775 3344455 4346777775 4
Q ss_pred CCHHHHHHHHHHHHcCC
Q 022811 233 ASREDIAALVKEIMEGD 249 (291)
Q Consensus 233 ~~~~~l~~ai~~vl~~~ 249 (291)
.+.+++.++|.+++.++
T Consensus 326 ~~~~~l~~~i~~~~~~~ 342 (374)
T cd03801 326 GDPEALAEAILRLLDDP 342 (374)
T ss_pred CCHHHHHHHHHHHHcCh
Confidence 56899999999999887
No 48
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.09 E-value=0.00011 Score=69.68 Aligned_cols=141 Identities=16% Similarity=0.270 Sum_probs=79.1
Q ss_pred CCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHH--hcCCeEEeeccCccc---cc
Q 022811 102 EPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEE--IKDRGMIANWCPQDK---VL 176 (291)
Q Consensus 102 ~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~w~pq~~---iL 176 (291)
++..++|.||.+....+++.+..-++-|++.+...+|..+.... ....+-..+.+. .++++.+.++.|+.+ .+
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~--~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~ 359 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPAS--GEARLRRRFAAHGVDPDRIIFSPVAPREEHLRRY 359 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTT--HHHHHHHHHHHTTS-GGGEEEEE---HHHHHHHG
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH--HHHHHHHHHHHcCCChhhEEEcCCCCHHHHHHHh
Confidence 35679999999999999999998888899989999999864411 111111111110 246788888777654 34
Q ss_pred CCCCcceEE---ecCCchhHHHHHhcCCCeeecccccchhH-HHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 177 SHPSVSVFL---THGGWNSILESVCGGVPIICWPFFAEQQT-NCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 177 ~h~~v~~fI---tHgG~~S~~Eal~~GvP~i~~P~~~DQ~~-na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
...++ ++ ..+|.+|++|||++|||+|.+|--.=.-. -+..+ ..+|+...+- .+.++-.+...++-.|.
T Consensus 360 ~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL-~~lGl~ElIA--~s~~eYv~~Av~La~D~ 431 (468)
T PF13844_consen 360 QLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASIL-RALGLPELIA--DSEEEYVEIAVRLATDP 431 (468)
T ss_dssp GG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHH-HHHT-GGGB---SSHHHHHHHHHHHHH-H
T ss_pred hhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHH-HHcCCchhcC--CCHHHHHHHHHHHhCCH
Confidence 45665 53 45789999999999999999996332223 34444 6778887765 35566544444566666
No 49
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.05 E-value=0.00022 Score=65.19 Aligned_cols=126 Identities=11% Similarity=0.159 Sum_probs=83.1
Q ss_pred EEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcc---cccCCCCcceE
Q 022811 108 YVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQD---KVLSHPSVSVF 184 (291)
Q Consensus 108 yvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~---~iL~h~~v~~f 184 (291)
++..|+.. ..+....+++++...+.+++++-... ..+.+.+...+|+.+.+++|+. .+++.+++-++
T Consensus 198 il~~G~~~--~~K~~~~li~a~~~~~~~l~ivG~g~--------~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ 267 (351)
T cd03804 198 YLSVGRLV--PYKRIDLAIEAFNKLGKRLVVIGDGP--------ELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFLF 267 (351)
T ss_pred EEEEEcCc--cccChHHHHHHHHHCCCcEEEEECCh--------hHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEEE
Confidence 44556665 23445667777777777766553322 1122333456889999999974 47889998333
Q ss_pred EecCCc-hhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 185 LTHGGW-NSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 185 ItHgG~-~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
-+.-|. .+++||+++|+|+|+....+ ....+ +.-+.|..+. .-+.+++.++|.++++++
T Consensus 268 ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i-~~~~~G~~~~-~~~~~~la~~i~~l~~~~ 327 (351)
T cd03804 268 PAEEDFGIVPVEAMASGTPVIAYGKGG----ALETV-IDGVTGILFE-EQTVESLAAAVERFEKNE 327 (351)
T ss_pred CCcCCCCchHHHHHHcCCCEEEeCCCC----Cccee-eCCCCEEEeC-CCCHHHHHHHHHHHHhCc
Confidence 334333 46789999999999986533 22334 3435788775 347888999999999887
No 50
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.03 E-value=0.0026 Score=60.89 Aligned_cols=137 Identities=11% Similarity=0.136 Sum_probs=84.8
Q ss_pred eEEEEcCCcccCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCccccccHHHHHHh-cCCeEEeeccCccc---ccCCCC
Q 022811 106 VAYVNYGSITVMTDEQMKEFAWGLANS-GHPFLWIVRPDMVTGDSAILSQEFYEEI-KDRGMIANWCPQDK---VLSHPS 180 (291)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~w~pq~~---iL~h~~ 180 (291)
.+++..|+... .+.+..+++++... +..+++ ++.. ...+.+.+.. ..++.+.+|+++.+ +|+.++
T Consensus 264 ~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~i-vG~G-------~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 264 PLIVYVGRLGA--EKNLDFLKRVMERLPGARLAF-VGDG-------PYREELEKMFAGTPTVFTGMLQGDELSQAYASGD 333 (465)
T ss_pred eEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEE-EeCC-------hHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCC
Confidence 44556687752 34455666666654 455554 4432 1112222211 24678889997544 888888
Q ss_pred cceEEecCC----chhHHHHHhcCCCeeecccccchhHHHHHHHHH---hCcceeeCCCCCHHHHHHHHHHHHcCChH-H
Q 022811 181 VSVFLTHGG----WNSILESVCGGVPIICWPFFAEQQTNCRYASTT---WGIGMEVNRDASREDIAALVKEIMEGDKG-K 252 (291)
Q Consensus 181 v~~fItHgG----~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~---~G~G~~l~~~~~~~~l~~ai~~vl~~~~~-~ 252 (291)
+ ||.-.. .++++||+++|+|+|+....+ ....+ +. -+.|..+. .-+.+++.++|.++++|++- .
T Consensus 334 v--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv-~~~~~~~~G~lv~-~~d~~~la~~i~~ll~~~~~~~ 405 (465)
T PLN02871 334 V--FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDII-PPDQEGKTGFLYT-PGDVDDCVEKLETLLADPELRE 405 (465)
T ss_pred E--EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhh-hcCCCCCceEEeC-CCCHHHHHHHHHHHHhCHHHHH
Confidence 8 764432 447899999999999876432 22233 43 46788775 35789999999999987732 3
Q ss_pred HHHHHHHH
Q 022811 253 LIRQNVQD 260 (291)
Q Consensus 253 ~~r~~a~~ 260 (291)
.+.+++++
T Consensus 406 ~~~~~a~~ 413 (465)
T PLN02871 406 RMGAAARE 413 (465)
T ss_pred HHHHHHHH
Confidence 44555544
No 51
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.01 E-value=0.0041 Score=55.64 Aligned_cols=83 Identities=18% Similarity=0.199 Sum_probs=60.7
Q ss_pred cCCeEEeeccCcc---cccCCCCcceEEe--cCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCH
Q 022811 161 KDRGMIANWCPQD---KVLSHPSVSVFLT--HGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASR 235 (291)
Q Consensus 161 ~~~~~v~~w~pq~---~iL~h~~v~~fIt--HgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 235 (291)
.+++.+.+++++. .++..+++.++.+ -+..+++.||+++|+|+|+-+..+ ....+ +..+.|..+. .-+.
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~-~~~~~g~~~~-~~~~ 331 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEII-TDGENGLLVP-PGDP 331 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHh-cCCcceeEEC-CCCH
Confidence 4678889999875 3788888832222 245678999999999999876533 34445 4545667665 4678
Q ss_pred HHHHHHHHHHHcCC
Q 022811 236 EDIAALVKEIMEGD 249 (291)
Q Consensus 236 ~~l~~ai~~vl~~~ 249 (291)
+++.++|.++++++
T Consensus 332 ~~l~~~i~~~~~~~ 345 (377)
T cd03798 332 EALAEAILRLLADP 345 (377)
T ss_pred HHHHHHHHHHhcCc
Confidence 99999999999987
No 52
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.00 E-value=0.00028 Score=63.44 Aligned_cols=133 Identities=15% Similarity=0.142 Sum_probs=81.0
Q ss_pred CCceEEEEcCCccc-CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCccc---ccCC
Q 022811 103 PNSVAYVNYGSITV-MTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDK---VLSH 178 (291)
Q Consensus 103 ~~~vvyvs~GS~~~-~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~---iL~h 178 (291)
++..+++..|+... ...+.+-+.+..+...+..+++. +.... ............++.+.+|+++.+ +++.
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~-G~~~~-----~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 262 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIV-GNGLE-----LEEESYELEGDPRVEFLGAYPQEEIDDFYAE 262 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEE-cCchh-----hhHHHHhhcCCCeEEEeCCCCHHHHHHHHHh
Confidence 44567777888752 22333333434343334555544 42210 000000002346788899997554 6888
Q ss_pred CCcceEEe--c--CC-chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 179 PSVSVFLT--H--GG-WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 179 ~~v~~fIt--H--gG-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
+++ +|. + .| ..++.||+++|+|+|+.+.. .....+ +.-+.|..+. .-+.+++.+++.++++++
T Consensus 263 ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i-~~~~~g~~~~-~~d~~~l~~~i~~l~~~~ 330 (359)
T cd03823 263 IDV--LVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELV-RDGVNGLLFP-PGDAEDLAAALERLIDDP 330 (359)
T ss_pred CCE--EEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHh-cCCCcEEEEC-CCCHHHHHHHHHHHHhCh
Confidence 888 553 2 33 44799999999999997653 345555 4435677775 346899999999999977
No 53
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=97.99 E-value=0.00032 Score=64.56 Aligned_cols=221 Identities=13% Similarity=0.103 Sum_probs=121.5
Q ss_pred HHHhhhcCccEEEEcCcccccHHHHHHHHhc---CCCeEEEccccccCCCCCccccc----------cccCCCCCC----
Q 022811 28 TEVQNCLESSAIIFNTFDEHEGKVLEAIASK---SPNIYTVGPLHLLCRHLPESEFK----------SFRSNLWKE---- 90 (291)
Q Consensus 28 ~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~---~p~v~~vGpl~~~~~~~~~~~~~----------~~~~~~~~~---- 90 (291)
+..+...+-|.+++=-+++|-.......+.. .|-++||.|=.+-........++ ++..+++..
T Consensus 69 ~~~~~~~~pd~~i~iD~p~Fnl~lak~~k~~~~~i~viyyi~PqvWAWr~~R~~~i~k~~d~vl~ifPFE~~~yg~~~~~ 148 (347)
T PRK14089 69 EMVELAKQADKVLLMDSSSFNIPLAKKIKKAYPKKEIIYYILPQVWAWKKGRAKILEKYCDFLASILPFEVQFYQSKATY 148 (347)
T ss_pred HHHHHhcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccceeeCcchHHHHHHHHhhhhccCCCCHHHhCCCCEE
Confidence 3334456789999999999999988888876 56799999977643321110000 000000000
Q ss_pred --C---hhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCC-EEEEEcCCCCCCccccccHHHHHHhcC--
Q 022811 91 --D---PECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHP-FLWIVRPDMVTGDSAILSQEFYEEIKD-- 162 (291)
Q Consensus 91 --~---~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~-~lw~~~~~~~~~~~~~~~~~~~~~~~~-- 162 (291)
. +.+...-...+++++|.+--||..+.-...+..++++....... ..+.+.... . . +.+......
T Consensus 149 VGhPl~d~~~~~~~~~~~~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~---~---~-~~i~~~~~~~~ 221 (347)
T PRK14089 149 VGHPLLDEIKEFKKDLDKEGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFF---K---G-KDLKEIYGDIS 221 (347)
T ss_pred ECCcHHHhhhhhhhhcCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCC---c---H-HHHHHHHhcCC
Confidence 0 01111101112346899999998643334444333433322111 222222110 0 1 222221211
Q ss_pred CeEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeeccc--ccchhHHHHHHHH--HhCcceee------C--
Q 022811 163 RGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPF--FAEQQTNCRYAST--TWGIGMEV------N-- 230 (291)
Q Consensus 163 ~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~--~~DQ~~na~~v~~--~~G~G~~l------~-- 230 (291)
...+.+ .-.+++..+++ .|+-+|..|+ |+.++|+|||+ ++ ..-|+.||+++.. ..|+...+ +
T Consensus 222 ~~~~~~--~~~~~m~~aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~v 295 (347)
T PRK14089 222 EFEISY--DTHKALLEAEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPL 295 (347)
T ss_pred CcEEec--cHHHHHHhhhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCccccc
Confidence 222222 22358888888 9999999999 99999999999 55 3468889999831 44554444 1
Q ss_pred ------CCCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 022811 231 ------RDASREDIAALVKEIMEGDKGKLIRQNVQDWRKKA 265 (291)
Q Consensus 231 ------~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~ 265 (291)
.+.+++.|.+++.+ ... +.+++...++.+.+
T Consensus 296 vPEllQ~~~t~~~la~~i~~-~~~---~~~~~~~~~l~~~l 332 (347)
T PRK14089 296 HPELLQEFVTVENLLKAYKE-MDR---EKFFKKSKELREYL 332 (347)
T ss_pred CchhhcccCCHHHHHHHHHH-HHH---HHHHHHHHHHHHHh
Confidence 25888899888877 111 14444444444443
No 54
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.95 E-value=0.00012 Score=66.41 Aligned_cols=145 Identities=14% Similarity=0.135 Sum_probs=86.7
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHHhCC-CCEEEEEcCCCCCCccccccHHHH--HHhcCCeEEeeccCcc---cccCC
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLANSG-HPFLWIVRPDMVTGDSAILSQEFY--EEIKDRGMIANWCPQD---KVLSH 178 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~~~~-~~~lw~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~w~pq~---~iL~h 178 (291)
..+++..|+.. .......+++++.... ..+++.-... ....+. ... .....|+.+.+|+|+. .++..
T Consensus 191 ~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~l~i~G~g~----~~~~~~-~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ 263 (357)
T cd03795 191 RPFFLFVGRLV--YYKGLDVLLEAAAALPDAPLVIVGEGP----LEAELE-ALAAALGLLDRVRFLGRLDDEEKAALLAA 263 (357)
T ss_pred CcEEEEecccc--cccCHHHHHHHHHhccCcEEEEEeCCh----hHHHHH-HHHHhcCCcceEEEcCCCCHHHHHHHHHh
Confidence 45667777764 2234555666666655 4544443211 000111 111 1134688899999975 38888
Q ss_pred CCcceEEec---CC-chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCChH-HH
Q 022811 179 PSVSVFLTH---GG-WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGDKG-KL 253 (291)
Q Consensus 179 ~~v~~fItH---gG-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~-~~ 253 (291)
+++.++.++ -| ..+++||+++|+|+|+....+... .+.+.-+.|..+. .-+.+++.++|.++++|++. ++
T Consensus 264 ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~----~i~~~~~~g~~~~-~~d~~~~~~~i~~l~~~~~~~~~ 338 (357)
T cd03795 264 CDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGS----YVNLHGVTGLVVP-PGDPAALAEAIRRLLEDPELRER 338 (357)
T ss_pred CCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchh----HHhhCCCceEEeC-CCCHHHHHHHHHHHHHCHHHHHH
Confidence 888444442 33 347999999999999976544433 2312136777665 45789999999999998732 34
Q ss_pred HHHHHHHH
Q 022811 254 IRQNVQDW 261 (291)
Q Consensus 254 ~r~~a~~l 261 (291)
+++++++.
T Consensus 339 ~~~~~~~~ 346 (357)
T cd03795 339 LGEAARER 346 (357)
T ss_pred HHHHHHHH
Confidence 44444443
No 55
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=97.94 E-value=0.00024 Score=64.02 Aligned_cols=145 Identities=10% Similarity=0.152 Sum_probs=84.7
Q ss_pred CceEEEEcCCccc-CCHHHHHHHHHHHHh--CCCCEEEEEcCCCCCCccccccHHHHH--HhcCCeEEeeccCccc---c
Q 022811 104 NSVAYVNYGSITV-MTDEQMKEFAWGLAN--SGHPFLWIVRPDMVTGDSAILSQEFYE--EIKDRGMIANWCPQDK---V 175 (291)
Q Consensus 104 ~~vvyvs~GS~~~-~~~~~~~~i~~~l~~--~~~~~lw~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~w~pq~~---i 175 (291)
++.+++..|+... ...+.+-+++..+.. .+..+++.-+.. ....+ ..... ...+++.+.+++|+.+ +
T Consensus 201 ~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~----~~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~ 275 (374)
T cd03817 201 DEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP----EREEL-EELARELGLADRVIFTGFVPREELPDY 275 (374)
T ss_pred CCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc----hHHHH-HHHHHHcCCCCcEEEeccCChHHHHHH
Confidence 3456667777652 233444444444443 345555543321 00011 11111 1246788899998765 7
Q ss_pred cCCCCcceEEec----CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCChH
Q 022811 176 LSHPSVSVFLTH----GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGDKG 251 (291)
Q Consensus 176 L~h~~v~~fItH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~ 251 (291)
+.++++ +|.. +..+++.||+++|+|+|+.+.. ..+..+ +..+.|..+.. .+. ++.+++.+++++++.
T Consensus 276 ~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i-~~~~~g~~~~~-~~~-~~~~~i~~l~~~~~~ 346 (374)
T cd03817 276 YKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLV-ADGENGFLFPP-GDE-ALAEALLRLLQDPEL 346 (374)
T ss_pred HHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCCC----Chhhhe-ecCceeEEeCC-CCH-HHHHHHHHHHhChHH
Confidence 888888 5533 3347899999999999997642 344445 44467887763 222 899999999988732
Q ss_pred -HHHHHHHHHHH
Q 022811 252 -KLIRQNVQDWR 262 (291)
Q Consensus 252 -~~~r~~a~~l~ 262 (291)
..+.+++++..
T Consensus 347 ~~~~~~~~~~~~ 358 (374)
T cd03817 347 RRRLSKNAEESA 358 (374)
T ss_pred HHHHHHHHHHHH
Confidence 23444444443
No 56
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=97.94 E-value=0.00023 Score=64.35 Aligned_cols=137 Identities=18% Similarity=0.175 Sum_probs=81.2
Q ss_pred CCceEEEEcCCccc-CCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCccc---ccC
Q 022811 103 PNSVAYVNYGSITV-MTDEQMKEFAWGLANS-GHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDK---VLS 177 (291)
Q Consensus 103 ~~~vvyvs~GS~~~-~~~~~~~~i~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~---iL~ 177 (291)
.++.+++..|+... ...+.+.+.+..+.+. +..+++ ++... ....+.+.......+++.+.+++++.. ++.
T Consensus 218 ~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~~---~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 293 (394)
T cd03794 218 DDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDGP---EKEELKELAKALGLDNVTFLGRVPKEELPELLA 293 (394)
T ss_pred CCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCcc---cHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHH
Confidence 34567777788752 2334444444444433 455444 44321 001111111112246788889998654 788
Q ss_pred CCCcceEEecCC-------chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 178 HPSVSVFLTHGG-------WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 178 h~~v~~fItHgG-------~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.+++..+-++.+ .+++.||+++|+|+|+.+..+.+.. + ...+.|..+. .-+.+++.++|.+++.|+
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~-~~~~~g~~~~-~~~~~~l~~~i~~~~~~~ 366 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----V-EEAGAGLVVP-PGDPEALAAAILELLDDP 366 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----h-ccCCcceEeC-CCCHHHHHHHHHHHHhCh
Confidence 888833322221 3347999999999999987654432 3 2336777765 347899999999999877
No 57
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=97.93 E-value=0.0013 Score=58.78 Aligned_cols=135 Identities=14% Similarity=0.103 Sum_probs=80.4
Q ss_pred CCceEEEEcCCccc-CCHHHHHHHHHHHHh--CCCCEEEEEcCCCCCCccccccHHHHHH--hcCCeEEeeccCcc-ccc
Q 022811 103 PNSVAYVNYGSITV-MTDEQMKEFAWGLAN--SGHPFLWIVRPDMVTGDSAILSQEFYEE--IKDRGMIANWCPQD-KVL 176 (291)
Q Consensus 103 ~~~vvyvs~GS~~~-~~~~~~~~i~~~l~~--~~~~~lw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~w~pq~-~iL 176 (291)
+++++++..|+... ...+.+-+.+..+.+ .+..|+++ +...... ......... ...++.+.++..+. .++
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~-G~~~~~~---~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 261 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLV-GDGDEEN---PAAILEIEKLGLEGRVEFLGFRDDVPELL 261 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEE-cCCCcch---hhHHHHHHhcCCcceEEEeeccccHHHHH
Confidence 34567788888752 233444444555543 33454444 3321110 000000111 23567777775544 388
Q ss_pred CCCCcceEEecCC----chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 177 SHPSVSVFLTHGG----WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 177 ~h~~v~~fItHgG----~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
..+++ +|.-.. .+++.||+++|+|+|+-+..+ ....+ +..+.|..+. .-+.+++.++|.+++.++
T Consensus 262 ~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i-~~~~~g~~~~-~~~~~~~~~~i~~l~~~~ 330 (359)
T cd03808 262 AAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAV-IDGVNGFLVP-PGDAEALADAIERLIEDP 330 (359)
T ss_pred HhccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhh-hcCcceEEEC-CCCHHHHHHHHHHHHhCH
Confidence 88888 664432 578999999999999976532 33444 4446777765 346899999999999887
No 58
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=97.93 E-value=0.00097 Score=60.33 Aligned_cols=136 Identities=14% Similarity=0.141 Sum_probs=80.4
Q ss_pred CceEEEEcCCccc-CCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCccccccHHHHHH--hcCCeEEeeccCccc---c
Q 022811 104 NSVAYVNYGSITV-MTDEQMKEFAWGLANS--GHPFLWIVRPDMVTGDSAILSQEFYEE--IKDRGMIANWCPQDK---V 175 (291)
Q Consensus 104 ~~vvyvs~GS~~~-~~~~~~~~i~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~w~pq~~---i 175 (291)
+++.++.+|+... ...+.+-+.+..+... +..++++-... ....+ ..+... .++++.+.+++|+.+ +
T Consensus 178 ~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~----~~~~~-~~~~~~~~~~~~v~~~g~~~~~~l~~~ 252 (355)
T cd03799 178 EPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGP----LRDEL-EALIAELGLEDRVTLLGAKSQEEVREL 252 (355)
T ss_pred CCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCc----cHHHH-HHHHHHcCCCCeEEECCcCChHHHHHH
Confidence 3456667777642 2334444444444443 34444443221 00011 111122 346788999997553 7
Q ss_pred cCCCCcceEEec--------CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHc
Q 022811 176 LSHPSVSVFLTH--------GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIME 247 (291)
Q Consensus 176 L~h~~v~~fItH--------gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~ 247 (291)
+.++++.++-+. |..++++||+++|+|+|+.+... ....+ +....|..+. .-+.+++.++|.++++
T Consensus 253 ~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i-~~~~~g~~~~-~~~~~~l~~~i~~~~~ 326 (355)
T cd03799 253 LRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELV-EDGETGLLVP-PGDPEALADAIERLLD 326 (355)
T ss_pred HHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhh-hCCCceEEeC-CCCHHHHHHHHHHHHh
Confidence 788888333222 33578999999999999976532 22344 4434777775 3478999999999998
Q ss_pred CCh
Q 022811 248 GDK 250 (291)
Q Consensus 248 ~~~ 250 (291)
+++
T Consensus 327 ~~~ 329 (355)
T cd03799 327 DPE 329 (355)
T ss_pred CHH
Confidence 773
No 59
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=97.89 E-value=9e-05 Score=58.88 Aligned_cols=110 Identities=15% Similarity=0.143 Sum_probs=71.6
Q ss_pred ceEEEEcCCcccC---CHHHHHHHHHHHHhCCC-CEEEEEcCCCCCCccccccHHHHHHh-cCCe--EEeeccCc-cccc
Q 022811 105 SVAYVNYGSITVM---TDEQMKEFAWGLANSGH-PFLWIVRPDMVTGDSAILSQEFYEEI-KDRG--MIANWCPQ-DKVL 176 (291)
Q Consensus 105 ~vvyvs~GS~~~~---~~~~~~~i~~~l~~~~~-~~lw~~~~~~~~~~~~~~~~~~~~~~-~~~~--~v~~w~pq-~~iL 176 (291)
..+||+-||.... +.-..++..+.|.+.|+ +.+..++.+.. ..++...... .+.. ...+|-|- .+..
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~-----~~~d~~~~~~k~~gl~id~y~f~psl~e~I 78 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQP-----FFGDPIDLIRKNGGLTIDGYDFSPSLTEDI 78 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCcc-----CCCCHHHhhcccCCeEEEEEecCccHHHHH
Confidence 4799999998621 11223456666777775 56666765421 1222221111 1222 23577886 3466
Q ss_pred CCCCcceEEecCCchhHHHHHhcCCCeeeccc----ccchhHHHHHHHH
Q 022811 177 SHPSVSVFLTHGGWNSILESVCGGVPIICWPF----FAEQQTNCRYAST 221 (291)
Q Consensus 177 ~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~----~~DQ~~na~~v~~ 221 (291)
..+++ +|+|+|.||++|.+..|+|.|+++- -.+|-.-|..+++
T Consensus 79 ~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~ 125 (170)
T KOG3349|consen 79 RSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAE 125 (170)
T ss_pred hhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHh
Confidence 66887 9999999999999999999999995 3578888888843
No 60
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.88 E-value=0.00084 Score=63.18 Aligned_cols=81 Identities=16% Similarity=0.246 Sum_probs=59.9
Q ss_pred cCCeEEeeccCccc---ccCCCCcceEEe--c-------CCc-hhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcce
Q 022811 161 KDRGMIANWCPQDK---VLSHPSVSVFLT--H-------GGW-NSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGM 227 (291)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~h~~v~~fIt--H-------gG~-~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~ 227 (291)
.+++.+.+|+|+.+ +|..+++ ||. + -|. ++++||+++|+|+|+....+ ....+ +.-..|.
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v-~~~~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELV-EADKSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhh-cCCCceE
Confidence 46788899999764 7888888 554 2 233 57899999999999975432 33344 4435677
Q ss_pred eeCCCCCHHHHHHHHHHHHc-CC
Q 022811 228 EVNRDASREDIAALVKEIME-GD 249 (291)
Q Consensus 228 ~l~~~~~~~~l~~ai~~vl~-~~ 249 (291)
.+. .-+.+++.++|.++++ |+
T Consensus 351 lv~-~~d~~~la~ai~~l~~~d~ 372 (406)
T PRK15427 351 LVP-ENDAQALAQRLAAFSQLDT 372 (406)
T ss_pred EeC-CCCHHHHHHHHHHHHhCCH
Confidence 775 4578999999999998 77
No 61
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.86 E-value=0.00024 Score=57.97 Aligned_cols=136 Identities=16% Similarity=0.183 Sum_probs=82.0
Q ss_pred CCCceEEEEcCCccc-CCHHHHHHHHHHHHh--CCCCEEEEEcCCCCCCccccccHHHHH--HhcCCeEEeeccC--cc-
Q 022811 102 EPNSVAYVNYGSITV-MTDEQMKEFAWGLAN--SGHPFLWIVRPDMVTGDSAILSQEFYE--EIKDRGMIANWCP--QD- 173 (291)
Q Consensus 102 ~~~~vvyvs~GS~~~-~~~~~~~~i~~~l~~--~~~~~lw~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~w~p--q~- 173 (291)
.+++.+++..|+... -....+-.++.-+.. .+.-.+++++... ....+ ..... ....++.+.++.+ +.
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~---~~~~~-~~~~~~~~~~~~i~~~~~~~~~~l~ 87 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE---YKKEL-KNLIEKLNLKENIIFLGYVPDDELD 87 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC---HHHHH-HHHHHHTTCGTTEEEEESHSHHHHH
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc---ccccc-ccccccccccccccccccccccccc
Confidence 345677777888753 233333333333321 2233444454220 00011 11111 2357888899988 33
Q ss_pred cccCCCCcceEEec----CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 174 KVLSHPSVSVFLTH----GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 174 ~iL~h~~v~~fItH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.++..+++ +|+. +...++.||+++|+|+|+.- ...+...+ ...+.|..+.. .+.+++.++|.+++.++
T Consensus 88 ~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~-~~~~~g~~~~~-~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 88 ELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEII-NDGVNGFLFDP-NDIEELADAIEKLLNDP 159 (172)
T ss_dssp HHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHS-GTTTSEEEEST-TSHHHHHHHHHHHHHHH
T ss_pred ccccccee--ccccccccccccccccccccccceeecc----ccCCceee-ccccceEEeCC-CCHHHHHHHHHHHHCCH
Confidence 38888888 6665 56779999999999999864 34455555 55567888874 48999999999999877
No 62
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.85 E-value=0.001 Score=61.24 Aligned_cols=100 Identities=14% Similarity=0.179 Sum_probs=68.7
Q ss_pred cCCeEEeeccCccc-ccCCCCcceEEecC--CchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHH
Q 022811 161 KDRGMIANWCPQDK-VLSHPSVSVFLTHG--GWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASRED 237 (291)
Q Consensus 161 ~~~~~v~~w~pq~~-iL~h~~v~~fItHg--G~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 237 (291)
++++.+.++.++.. ++..+++-++.++. ...+++||+++|+|+|+..... .....+ +.-..|..+. .-+.++
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v-~~~~~G~lv~-~~d~~~ 334 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEII-EDGENGYLVP-KGDIEA 334 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHc-ccCCCceEeC-CCcHHH
Confidence 45677777766654 88899985555553 3568999999999999975421 123344 4446777775 457899
Q ss_pred HHHHHHHHHcCChH-HHHHHHHHHHHHHH
Q 022811 238 IAALVKEIMEGDKG-KLIRQNVQDWRKKA 265 (291)
Q Consensus 238 l~~ai~~vl~~~~~-~~~r~~a~~l~~~~ 265 (291)
+.++|.+++.+++- ..+.+++++.++.+
T Consensus 335 la~~i~~ll~~~~~~~~~~~~a~~~~~~~ 363 (372)
T cd04949 335 LAEAIIELLNDPKLLQKFSEAAYENAERY 363 (372)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 99999999998732 45666665554443
No 63
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.84 E-value=0.00043 Score=63.27 Aligned_cols=81 Identities=17% Similarity=0.215 Sum_probs=61.1
Q ss_pred cCCeEEeeccCccc---ccCCCCcceEEec----------CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcce
Q 022811 161 KDRGMIANWCPQDK---VLSHPSVSVFLTH----------GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGM 227 (291)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~h~~v~~fItH----------gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~ 227 (291)
.+++.+.+++|+.+ +++.+++ ||.- |-.+++.||+++|+|+|+-+..+ +...+ ..-+.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i-~~~~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAV-EDGETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhhe-ecCCeeE
Confidence 56788889988654 6888888 5532 23578999999999999877643 45555 4447787
Q ss_pred eeCCCCCHHHHHHHHHHHHcCC
Q 022811 228 EVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 228 ~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.++ .-+.+++.++|.++++++
T Consensus 317 ~~~-~~d~~~l~~~i~~l~~~~ 337 (367)
T cd05844 317 LVP-EGDVAALAAALGRLLADP 337 (367)
T ss_pred EEC-CCCHHHHHHHHHHHHcCH
Confidence 775 457899999999999877
No 64
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=97.82 E-value=0.0018 Score=57.55 Aligned_cols=82 Identities=18% Similarity=0.249 Sum_probs=57.0
Q ss_pred cCCeEEeeccCcc-cccCCCCcceEEecC----CchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCH
Q 022811 161 KDRGMIANWCPQD-KVLSHPSVSVFLTHG----GWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASR 235 (291)
Q Consensus 161 ~~~~~v~~w~pq~-~iL~h~~v~~fItHg----G~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 235 (291)
..++.+.++.... .++..+++ +|.-. ..++++||+++|+|+|+.+..+.+.. +.+....|..++ ..+.
T Consensus 234 ~~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~----~~~~~~~g~~~~-~~~~ 306 (348)
T cd03820 234 EDRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSE----IIEDGVNGLLVP-NGDV 306 (348)
T ss_pred CCeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchHh----hhccCcceEEeC-CCCH
Confidence 3456666664333 48888888 55443 25689999999999999765443322 323323777775 4567
Q ss_pred HHHHHHHHHHHcCC
Q 022811 236 EDIAALVKEIMEGD 249 (291)
Q Consensus 236 ~~l~~ai~~vl~~~ 249 (291)
+++.++|.++++|+
T Consensus 307 ~~~~~~i~~ll~~~ 320 (348)
T cd03820 307 EALAEALLRLMEDE 320 (348)
T ss_pred HHHHHHHHHHHcCH
Confidence 99999999999988
No 65
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=97.82 E-value=0.0043 Score=56.00 Aligned_cols=82 Identities=18% Similarity=0.276 Sum_probs=57.6
Q ss_pred cCCeEEee-ccCcc---cccCCCCcceEEec----CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCC
Q 022811 161 KDRGMIAN-WCPQD---KVLSHPSVSVFLTH----GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRD 232 (291)
Q Consensus 161 ~~~~~v~~-w~pq~---~iL~h~~v~~fItH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 232 (291)
.+++.+.+ |+|+. .++..+++-.+-++ +-.+++.||+++|+|+|+.+..+ ...+ ..-+.|..+. .
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i-~~~~~g~~~~-~ 318 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEV-LDGGTGLLVP-P 318 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hhee-eeCCCcEEEc-C
Confidence 46777664 58864 48888888333232 33568999999999999987644 2233 3346777765 3
Q ss_pred CCHHHHHHHHHHHHcCC
Q 022811 233 ASREDIAALVKEIMEGD 249 (291)
Q Consensus 233 ~~~~~l~~ai~~vl~~~ 249 (291)
-+.+++.+++.++++++
T Consensus 319 ~d~~~~~~~l~~l~~~~ 335 (366)
T cd03822 319 GDPAALAEAIRRLLADP 335 (366)
T ss_pred CCHHHHHHHHHHHHcCh
Confidence 46899999999999986
No 66
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.80 E-value=0.00073 Score=60.81 Aligned_cols=92 Identities=17% Similarity=0.199 Sum_probs=62.2
Q ss_pred cCCeEEeeccCccc---ccCCCCcceEEec--CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCH
Q 022811 161 KDRGMIANWCPQDK---VLSHPSVSVFLTH--GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASR 235 (291)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~h~~v~~fItH--gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 235 (291)
.+++.+.+|+++.+ ++..+++-++-++ |-.+++.||+++|+|+|+.+.. .....+ .. +.|..... +.
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~~~~-~~-~~~~~~~~--~~ 332 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKV----PWQELI-EY-GCGWVVDD--DV 332 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCC----CHHHHh-hc-CceEEeCC--Ch
Confidence 46788899999554 6888888333232 2256899999999999997643 234444 44 77777653 45
Q ss_pred HHHHHHHHHHHcCChH-HHHHHHHHH
Q 022811 236 EDIAALVKEIMEGDKG-KLIRQNVQD 260 (291)
Q Consensus 236 ~~l~~ai~~vl~~~~~-~~~r~~a~~ 260 (291)
+++.++|.+++++++- ..+.+++++
T Consensus 333 ~~~~~~i~~l~~~~~~~~~~~~~~~~ 358 (375)
T cd03821 333 DALAAALRRALELPQRLKAMGENGRA 358 (375)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 9999999999988621 334444443
No 67
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=97.78 E-value=0.00031 Score=64.91 Aligned_cols=136 Identities=11% Similarity=0.102 Sum_probs=82.3
Q ss_pred CceEEEEcCCcccCCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCccccccHHHHHH--hcCCeEEeeccCcc---
Q 022811 104 NSVAYVNYGSITVMTDEQMKEFAWGLANS-----GHPFLWIVRPDMVTGDSAILSQEFYEE--IKDRGMIANWCPQD--- 173 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~~l~~~-----~~~~lw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~w~pq~--- 173 (291)
+.+++++++-.... .+.+..+++++... +.++++...++. .....+... ..+++.+.+.+++.
T Consensus 197 ~~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 269 (365)
T TIGR00236 197 KRYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNP------VVREPLHKHLGDSKRVHLIEPLEYLDFL 269 (365)
T ss_pred CCEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCCh------HHHHHHHHHhCCCCCEEEECCCChHHHH
Confidence 34565654332111 13466666666542 456666544321 011112121 23577777665543
Q ss_pred cccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCChHHH
Q 022811 174 KVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGDKGKL 253 (291)
Q Consensus 174 ~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~ 253 (291)
.+++++++ +|+-.|.. +.||+++|+|+|..+-.++++. .+ + .|.+..+. .+.++|.+++.++++++ .
T Consensus 270 ~~l~~ad~--vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e---~~-~-~g~~~lv~--~d~~~i~~ai~~ll~~~---~ 336 (365)
T TIGR00236 270 NLAANSHL--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE---TV-E-AGTNKLVG--TDKENITKAAKRLLTDP---D 336 (365)
T ss_pred HHHHhCCE--EEECChhH-HHHHHHcCCCEEECCCCCCChH---HH-h-cCceEEeC--CCHHHHHHHHHHHHhCh---H
Confidence 46778887 89877644 7999999999999976555542 23 3 47776663 47899999999999887 5
Q ss_pred HHHHHH
Q 022811 254 IRQNVQ 259 (291)
Q Consensus 254 ~r~~a~ 259 (291)
.+++..
T Consensus 337 ~~~~~~ 342 (365)
T TIGR00236 337 EYKKMS 342 (365)
T ss_pred HHHHhh
Confidence 555443
No 68
>PRK10307 putative glycosyl transferase; Provisional
Probab=97.75 E-value=0.0023 Score=60.01 Aligned_cols=94 Identities=13% Similarity=0.170 Sum_probs=64.9
Q ss_pred CCeEEeeccCccc---ccCCCCcceEEecCCc------hhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCC
Q 022811 162 DRGMIANWCPQDK---VLSHPSVSVFLTHGGW------NSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRD 232 (291)
Q Consensus 162 ~~~~v~~w~pq~~---iL~h~~v~~fItHgG~------~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 232 (291)
+|+.+.+|+|+.. +++.+++.++.+..+. +.+.|++++|+|+|+....+.. ....+ + +.|+.+. .
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i-~--~~G~~~~-~ 357 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLV-E--GIGVCVE-P 357 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHH-h--CCcEEeC-C
Confidence 4788889998654 7889998655555432 3478999999999998653311 12233 3 7788775 4
Q ss_pred CCHHHHHHHHHHHHcCChH-HHHHHHHHHH
Q 022811 233 ASREDIAALVKEIMEGDKG-KLIRQNVQDW 261 (291)
Q Consensus 233 ~~~~~l~~ai~~vl~~~~~-~~~r~~a~~l 261 (291)
-+.+++.++|.++++|++. ..+++++++.
T Consensus 358 ~d~~~la~~i~~l~~~~~~~~~~~~~a~~~ 387 (412)
T PRK10307 358 ESVEALVAAIAALARQALLRPKLGTVAREY 387 (412)
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 5789999999999987732 4455555543
No 69
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.74 E-value=0.0017 Score=60.57 Aligned_cols=83 Identities=12% Similarity=0.175 Sum_probs=60.6
Q ss_pred hcCCeEEeeccCccc---ccCCCCcceEEecC----C-chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC
Q 022811 160 IKDRGMIANWCPQDK---VLSHPSVSVFLTHG----G-WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR 231 (291)
Q Consensus 160 ~~~~~~v~~w~pq~~---iL~h~~v~~fItHg----G-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~ 231 (291)
.+.++.+.+++|+.+ +++.+++ ||... | ..+++||+++|+|+|+.... .+...+ +.-..|..+..
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g~~Eiv-~~~~~G~~l~~ 327 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----GITEFV-LEGITGYHLAE 327 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCC----CcHhhc-ccCCceEEEeC
Confidence 456788889988554 6888888 66433 3 25789999999999998653 234444 44356775544
Q ss_pred CCCHHHHHHHHHHHHcCC
Q 022811 232 DASREDIAALVKEIMEGD 249 (291)
Q Consensus 232 ~~~~~~l~~ai~~vl~~~ 249 (291)
..+.+++.++|.++++|+
T Consensus 328 ~~d~~~la~~I~~ll~d~ 345 (380)
T PRK15484 328 PMTSDSIISDINRTLADP 345 (380)
T ss_pred CCCHHHHHHHHHHHHcCH
Confidence 568999999999999987
No 70
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=97.72 E-value=0.00029 Score=64.67 Aligned_cols=134 Identities=16% Similarity=0.141 Sum_probs=82.6
Q ss_pred CCceEEEEcCCcccC-CHHHHHHHHHHHHhCCC-CEEEEEcCCCCCCccccccHHHHHHh---cCCeEEeeccCcc---c
Q 022811 103 PNSVAYVNYGSITVM-TDEQMKEFAWGLANSGH-PFLWIVRPDMVTGDSAILSQEFYEEI---KDRGMIANWCPQD---K 174 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~-~~~~~~~i~~~l~~~~~-~~lw~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~w~pq~---~ 174 (291)
++++|++++|..... ..+.+..+++++..... .+.+++..+.. ....+.+ ..... .+++.+.+..+.. .
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--~~~~l~~-~~~~~~~~~~~v~~~~~~~~~~~~~ 273 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--TRPRIRE-AGLEFLGHHPNVLLISPLGYLYFLL 273 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--hHHHHHH-HHHhhccCCCCEEEECCcCHHHHHH
Confidence 356777888876533 45667778887765432 23333322210 0011111 11122 3567776654433 3
Q ss_pred ccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 175 VLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 175 iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
++..+++ ||+..| +.+.||+++|+|+|+++.. |. ++.+ .+.|++..+. -+.+++.++|.++++++
T Consensus 274 l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~-~~~g~~~~~~--~~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 274 LLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPET-VESGTNVLVG--TDPEAILAAIEKLLSDE 338 (363)
T ss_pred HHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchh-hheeeEEecC--CCHHHHHHHHHHHhcCc
Confidence 6777888 999999 7788999999999998743 22 3333 2347666553 25899999999999877
No 71
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.71 E-value=0.0095 Score=54.03 Aligned_cols=82 Identities=13% Similarity=0.108 Sum_probs=58.5
Q ss_pred hcCCeEEeeccC-cc---cccCCCCcceEEecC----CchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC
Q 022811 160 IKDRGMIANWCP-QD---KVLSHPSVSVFLTHG----GWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR 231 (291)
Q Consensus 160 ~~~~~~v~~w~p-q~---~iL~h~~v~~fItHg----G~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~ 231 (291)
...++.+.+|++ +. .++..+++ +|.-. ..+++.||+++|+|+|+.... .....+ ..-+.|..+.
T Consensus 242 ~~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~-~~~~~g~~~~- 313 (365)
T cd03825 242 LPFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIV-DHGVTGYLAK- 313 (365)
T ss_pred CCCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhhe-eCCCceEEeC-
Confidence 346778889988 33 36888888 66643 357999999999999987542 222233 3334666665
Q ss_pred CCCHHHHHHHHHHHHcCC
Q 022811 232 DASREDIAALVKEIMEGD 249 (291)
Q Consensus 232 ~~~~~~l~~ai~~vl~~~ 249 (291)
..+.+++.+++.++++++
T Consensus 314 ~~~~~~~~~~l~~l~~~~ 331 (365)
T cd03825 314 PGDPEDLAEGIEWLLADP 331 (365)
T ss_pred CCCHHHHHHHHHHHHhCH
Confidence 457899999999999877
No 72
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=97.71 E-value=0.0016 Score=60.00 Aligned_cols=81 Identities=16% Similarity=0.200 Sum_probs=61.3
Q ss_pred cCCeEEeeccCccc---ccCCCCcceEEec----CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCC
Q 022811 161 KDRGMIANWCPQDK---VLSHPSVSVFLTH----GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDA 233 (291)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~h~~v~~fItH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 233 (291)
.+++.+.+|+|+.+ ++..+++ ++.. +-..+++||+++|+|+|+.+..+ ....+ +..+.|..++ ..
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i-~~~~~g~~~~-~~ 353 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIV-VDGVTGLLVD-PR 353 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHc-cCCCCeEEeC-CC
Confidence 36788899999765 6888888 6643 22468999999999999876533 44455 5556888875 34
Q ss_pred CHHHHHHHHHHHHcCC
Q 022811 234 SREDIAALVKEIMEGD 249 (291)
Q Consensus 234 ~~~~l~~ai~~vl~~~ 249 (291)
+.+++.++|.++++++
T Consensus 354 ~~~~l~~~i~~l~~~~ 369 (398)
T cd03800 354 DPEALAAALRRLLTDP 369 (398)
T ss_pred CHHHHHHHHHHHHhCH
Confidence 7899999999999876
No 73
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.71 E-value=0.00079 Score=62.02 Aligned_cols=162 Identities=16% Similarity=0.248 Sum_probs=93.4
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCccccccHHHHH--HhcCCeEEeeccCcc-----cc
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLANS--GHPFLWIVRPDMVTGDSAILSQEFYE--EIKDRGMIANWCPQD-----KV 175 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~w~pq~-----~i 175 (291)
+.+++..|.........+..+++++... +..++ .++... ..+.+ ....+ ..++++.+.+|.++. ..
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~-ivG~g~---~~~~l-~~~~~~~~l~~~v~f~G~~~~~~~~~~~~ 254 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLH-IIGDGS---DFEKC-KAYSRELGIEQRIIWHGWQSQPWEVVQQK 254 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEE-EEeCCc---cHHHH-HHHHHHcCCCCeEEEecccCCcHHHHHHH
Confidence 4556677766432234455666666554 33443 344321 11111 11112 134678888987542 24
Q ss_pred cCCCCcceEEe--c--CCchhHHHHHhcCCCeeecc-cccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCCh
Q 022811 176 LSHPSVSVFLT--H--GGWNSILESVCGGVPIICWP-FFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGDK 250 (291)
Q Consensus 176 L~h~~v~~fIt--H--gG~~S~~Eal~~GvP~i~~P-~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~ 250 (291)
+..+++ ||. + |-..++.||+++|+|+|+.- ..+ ....+ +.-..|..+. .-+.+++.++|.+++++++
T Consensus 255 ~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv-~~~~~G~lv~-~~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 255 IKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDII-KPGLNGELYT-PGNIDEFVGKLNKVISGEV 326 (359)
T ss_pred HhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHc-cCCCceEEEC-CCCHHHHHHHHHHHHhCcc
Confidence 555666 553 2 33579999999999999975 322 22234 4445677775 4689999999999999885
Q ss_pred ---HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 022811 251 ---GKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLH 288 (291)
Q Consensus 251 ---~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~ 288 (291)
...++++++++... ...+.+.+.++.+.+
T Consensus 327 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 327 KYQHDAIPNSIERFYEV---------LYFKNLNNALFSKLQ 358 (359)
T ss_pred cCCHHHHHHHHHHhhHH---------HHHHHHHHHHHHHhc
Confidence 23455555555443 224556666665543
No 74
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.68 E-value=0.0019 Score=57.87 Aligned_cols=78 Identities=18% Similarity=0.279 Sum_probs=55.0
Q ss_pred CCeEEeeccCcc-cccCCCCcceEEecCC----chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHH
Q 022811 162 DRGMIANWCPQD-KVLSHPSVSVFLTHGG----WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASRE 236 (291)
Q Consensus 162 ~~~~v~~w~pq~-~iL~h~~v~~fItHgG----~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 236 (291)
.++.+.+...+. .++..+++ +|..+. .+++.||+++|+|+|+... ..+...+ .. .|..+. .-+.+
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~-~~--~g~~~~-~~~~~ 320 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELV-GD--TGFLVP-PGDPE 320 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHh-hc--CCEEeC-CCCHH
Confidence 456665554433 48888888 665544 4799999999999998643 3345455 33 566654 34689
Q ss_pred HHHHHHHHHHcCC
Q 022811 237 DIAALVKEIMEGD 249 (291)
Q Consensus 237 ~l~~ai~~vl~~~ 249 (291)
++.++|.++++++
T Consensus 321 ~l~~~i~~l~~~~ 333 (365)
T cd03807 321 ALAEAIEALLADP 333 (365)
T ss_pred HHHHHHHHHHhCh
Confidence 9999999999876
No 75
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.61 E-value=0.0022 Score=58.68 Aligned_cols=93 Identities=17% Similarity=0.143 Sum_probs=63.6
Q ss_pred cCCeEEeeccCccc-ccCCCCcceEEec----CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCH
Q 022811 161 KDRGMIANWCPQDK-VLSHPSVSVFLTH----GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASR 235 (291)
Q Consensus 161 ~~~~~v~~w~pq~~-iL~h~~v~~fItH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 235 (291)
.+++.+.++.++.. ++..+++ +|.- |...++.||+++|+|+|+.... ..+..+ +.-..|..++ .-+.
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i-~~~~~G~~~~-~~~~ 323 (371)
T cd04962 252 QDDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVV-KHGETGFLVD-VGDV 323 (371)
T ss_pred CceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCCC----Cchhhh-cCCCceEEcC-CCCH
Confidence 35677788776553 8888888 5522 3356999999999999996543 344445 4435676665 3578
Q ss_pred HHHHHHHHHHHcCChH-HHHHHHHHHH
Q 022811 236 EDIAALVKEIMEGDKG-KLIRQNVQDW 261 (291)
Q Consensus 236 ~~l~~ai~~vl~~~~~-~~~r~~a~~l 261 (291)
+++.++|.+++++++. ..+++++++.
T Consensus 324 ~~l~~~i~~l~~~~~~~~~~~~~~~~~ 350 (371)
T cd04962 324 EAMAEYALSLLEDDELWQEFSRAARNR 350 (371)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 9999999999987632 3455555544
No 76
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.61 E-value=0.0046 Score=55.79 Aligned_cols=82 Identities=18% Similarity=0.253 Sum_probs=55.4
Q ss_pred hcCCeEEeeccCccc---ccCCCCcceEEec--CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCC
Q 022811 160 IKDRGMIANWCPQDK---VLSHPSVSVFLTH--GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDAS 234 (291)
Q Consensus 160 ~~~~~~v~~w~pq~~---iL~h~~v~~fItH--gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 234 (291)
..+++.+.+|+|+.+ +|..+++.++-+. +..+++.||+++|+|+|+-...+ ....+ . ..|..+. .-+
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~-~--~~~~~~~-~~~ 322 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVA-G--DAALYFD-PLD 322 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCC----cccee-c--CceeeeC-CCC
Confidence 457788889998764 7888887332221 23558999999999999965421 11122 2 2344443 347
Q ss_pred HHHHHHHHHHHHcCC
Q 022811 235 REDIAALVKEIMEGD 249 (291)
Q Consensus 235 ~~~l~~ai~~vl~~~ 249 (291)
.+++.++|.++++|+
T Consensus 323 ~~~~~~~i~~l~~~~ 337 (365)
T cd03809 323 PEALAAAIERLLEDP 337 (365)
T ss_pred HHHHHHHHHHHhcCH
Confidence 899999999999887
No 77
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.55 E-value=0.0013 Score=60.66 Aligned_cols=80 Identities=16% Similarity=0.161 Sum_probs=56.3
Q ss_pred CCeEEeeccCcc-cccCCCCcceEE--ec--CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHH
Q 022811 162 DRGMIANWCPQD-KVLSHPSVSVFL--TH--GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASRE 236 (291)
Q Consensus 162 ~~~~v~~w~pq~-~iL~h~~v~~fI--tH--gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 236 (291)
.++.+.++..+. .++..+++ || ++ |-.++++||+++|+|+|+-...+ +...+ +.-..|..+. .-+.+
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i-~~~~~g~~~~-~~d~~ 326 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELV-QHGVTGALVP-PGDAV 326 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHh-cCCCceEEeC-CCCHH
Confidence 455565654443 48888888 55 33 34669999999999999976532 44444 4434677765 35789
Q ss_pred HHHHHHHHHHcCC
Q 022811 237 DIAALVKEIMEGD 249 (291)
Q Consensus 237 ~l~~ai~~vl~~~ 249 (291)
++.++|.++++++
T Consensus 327 ~la~~i~~l~~~~ 339 (374)
T TIGR03088 327 ALARALQPYVSDP 339 (374)
T ss_pred HHHHHHHHHHhCH
Confidence 9999999999876
No 78
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.47 E-value=0.0016 Score=57.22 Aligned_cols=144 Identities=10% Similarity=0.053 Sum_probs=99.4
Q ss_pred CceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHH--hcCCeEEeeccCccc-ccCCCC
Q 022811 104 NSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEE--IKDRGMIANWCPQDK-VLSHPS 180 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~w~pq~~-iL~h~~ 180 (291)
..-|+|++|-.- +....-+++..|...++.+-.+++... .-++....+ ..+|+.+......+. ++..++
T Consensus 158 ~r~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~~------p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d 229 (318)
T COG3980 158 KRDILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSSN------PTLKNLRKRAEKYPNINLYIDTNDMAELMKEAD 229 (318)
T ss_pred hheEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCCC------cchhHHHHHHhhCCCeeeEecchhHHHHHHhcc
Confidence 345899988764 344667777888777766666666321 112222222 235666665555443 887888
Q ss_pred cceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCChHHHHHHHHHH
Q 022811 181 VSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGDKGKLIRQNVQD 260 (291)
Q Consensus 181 v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~ 260 (291)
. .|+-+|. |++|++.-|+|.+++|+...|---|... +..|+-..+.-.++......-+.++++|. ..|++.-.
T Consensus 230 ~--aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f-~~lg~~~~l~~~l~~~~~~~~~~~i~~d~---~~rk~l~~ 302 (318)
T COG3980 230 L--AISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEF-EALGIIKQLGYHLKDLAKDYEILQIQKDY---ARRKNLSF 302 (318)
T ss_pred h--heeccch-HHHHHHHhcCCceEEeeeccHHHHHHHH-HhcCchhhccCCCchHHHHHHHHHhhhCH---HHhhhhhh
Confidence 7 8887765 8999999999999999999999999998 67787776642366777777788888877 56655444
Q ss_pred HH
Q 022811 261 WR 262 (291)
Q Consensus 261 l~ 262 (291)
.+
T Consensus 303 ~~ 304 (318)
T COG3980 303 GS 304 (318)
T ss_pred cc
Confidence 33
No 79
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.46 E-value=0.0028 Score=57.39 Aligned_cols=78 Identities=13% Similarity=0.109 Sum_probs=54.4
Q ss_pred cCCeEEeeccCcc-cccCCCCcceEEecC----CchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCH
Q 022811 161 KDRGMIANWCPQD-KVLSHPSVSVFLTHG----GWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASR 235 (291)
Q Consensus 161 ~~~~~v~~w~pq~-~iL~h~~v~~fItHg----G~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 235 (291)
.+++.+.++..+. .+|..+++ ||.-. ..++++||+++|+|+|+.. ...+...+ +. .|..+. .-+.
T Consensus 244 ~~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~i-~~--~g~~~~-~~~~ 313 (360)
T cd04951 244 SNRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVATD----AGGVREVV-GD--SGLIVP-ISDP 313 (360)
T ss_pred CCcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEec----CCChhhEe-cC--CceEeC-CCCH
Confidence 3577788876654 48888888 55432 2578999999999999853 34445455 33 444444 3578
Q ss_pred HHHHHHHHHHHcC
Q 022811 236 EDIAALVKEIMEG 248 (291)
Q Consensus 236 ~~l~~ai~~vl~~ 248 (291)
+++.+++.+++.+
T Consensus 314 ~~~~~~i~~ll~~ 326 (360)
T cd04951 314 EALANKIDEILKM 326 (360)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999853
No 80
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.45 E-value=0.0033 Score=58.01 Aligned_cols=142 Identities=12% Similarity=0.077 Sum_probs=79.9
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCccccccHHHHH---Hhc---CCeEE-eeccCcc--
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLANS--GHPFLWIVRPDMVTGDSAILSQEFYE---EIK---DRGMI-ANWCPQD-- 173 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~---~~~---~~~~v-~~w~pq~-- 173 (291)
..+++..|.... .+.+..+++++... +..++++.+.... ..+.+.+.+ ... .++.+ .++++..
T Consensus 201 ~~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 274 (388)
T TIGR02149 201 RPYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAPDT----PEVAEEVRQAVALLDRNRTGIIWINKMLPKEEL 274 (388)
T ss_pred ceEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCCCc----HHHHHHHHHHHHHhccccCceEEecCCCCHHHH
Confidence 345566677652 23445555555543 4566555443210 011111111 111 23443 4667654
Q ss_pred -cccCCCCcceEEec----CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCH------HHHHHHH
Q 022811 174 -KVLSHPSVSVFLTH----GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASR------EDIAALV 242 (291)
Q Consensus 174 -~iL~h~~v~~fItH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~------~~l~~ai 242 (291)
.++.++++ ||.= +...+++||+++|+|+|+.... .....+ +.-+.|..++. -+. +++.++|
T Consensus 275 ~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i-~~~~~G~~~~~-~~~~~~~~~~~l~~~i 346 (388)
T TIGR02149 275 VELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVV-VDGETGFLVPP-DNSDADGFQAELAKAI 346 (388)
T ss_pred HHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHh-hCCCceEEcCC-CCCcccchHHHHHHHH
Confidence 37888888 6542 2245779999999999997643 344455 44457888763 223 8899999
Q ss_pred HHHHcCChH-HHHHHHHHH
Q 022811 243 KEIMEGDKG-KLIRQNVQD 260 (291)
Q Consensus 243 ~~vl~~~~~-~~~r~~a~~ 260 (291)
.++++|++. +.+.+++++
T Consensus 347 ~~l~~~~~~~~~~~~~a~~ 365 (388)
T TIGR02149 347 NILLADPELAKKMGIAGRK 365 (388)
T ss_pred HHHHhCHHHHHHHHHHHHH
Confidence 999987732 334444443
No 81
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=97.44 E-value=0.0054 Score=57.16 Aligned_cols=92 Identities=13% Similarity=0.092 Sum_probs=63.7
Q ss_pred cCCeEEeeccCcc---cccCCCCcceEEe---c-CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCC
Q 022811 161 KDRGMIANWCPQD---KVLSHPSVSVFLT---H-GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDA 233 (291)
Q Consensus 161 ~~~~~v~~w~pq~---~iL~h~~v~~fIt---H-gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 233 (291)
.+++.+.++++.. .+|..+++ ||. + |...+++||+++|+|+|+....+ ....+ +.-+.|..++ .-
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i-~~~~~g~~~~-~~ 353 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAV-ADGETGLLVD-GH 353 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhh-ccCCceEECC-CC
Confidence 3678888998765 37888888 553 2 22458999999999999976432 33344 4445677765 35
Q ss_pred CHHHHHHHHHHHHcCChH-HHHHHHHHH
Q 022811 234 SREDIAALVKEIMEGDKG-KLIRQNVQD 260 (291)
Q Consensus 234 ~~~~l~~ai~~vl~~~~~-~~~r~~a~~ 260 (291)
+.+++.++|.+++++++- ..+++++++
T Consensus 354 d~~~la~~i~~~l~~~~~~~~~~~~~~~ 381 (405)
T TIGR03449 354 DPADWADALARLLDDPRTRIRMGAAAVE 381 (405)
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 789999999999987632 344455444
No 82
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.43 E-value=0.0061 Score=56.94 Aligned_cols=81 Identities=22% Similarity=0.257 Sum_probs=58.3
Q ss_pred cCCeEEeeccCccc-ccCCCCcceEEec--CCc-hhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHH
Q 022811 161 KDRGMIANWCPQDK-VLSHPSVSVFLTH--GGW-NSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASRE 236 (291)
Q Consensus 161 ~~~~~v~~w~pq~~-iL~h~~v~~fItH--gG~-~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 236 (291)
..++.+.+++++.. ++.++++-++=++ .|. +.+.||+++|+|+|+.+...+. +.+..|.|..+. .+.+
T Consensus 279 ~~~V~~~G~v~~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~------i~~~~~~g~lv~--~~~~ 350 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEG------IDALPGAELLVA--ADPA 350 (397)
T ss_pred CCCeEEeeecCCHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCccccc------ccccCCcceEeC--CCHH
Confidence 35788889998654 8888898322233 343 4699999999999998753321 112336677764 5889
Q ss_pred HHHHHHHHHHcCC
Q 022811 237 DIAALVKEIMEGD 249 (291)
Q Consensus 237 ~l~~ai~~vl~~~ 249 (291)
++.++|.++++|+
T Consensus 351 ~la~ai~~ll~~~ 363 (397)
T TIGR03087 351 DFAAAILALLANP 363 (397)
T ss_pred HHHHHHHHHHcCH
Confidence 9999999999887
No 83
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.41 E-value=0.024 Score=54.97 Aligned_cols=99 Identities=12% Similarity=0.120 Sum_probs=65.8
Q ss_pred cCCeEEeeccCcccccCCCCcceEEe---cCC-chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC---CC
Q 022811 161 KDRGMIANWCPQDKVLSHPSVSVFLT---HGG-WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR---DA 233 (291)
Q Consensus 161 ~~~~~v~~w~pq~~iL~h~~v~~fIt---HgG-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~---~~ 233 (291)
.+++.+.++.+...++..+++ ||. .=| ..+++||+++|+|+|+.-..+ .+...+ +.-..|..+.. .-
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI-~~g~nG~lv~~~~~~~ 448 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFI-EDNKNGYLIPIDEEED 448 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHc-cCCCCEEEEeCCcccc
Confidence 356777788777778988888 554 223 468999999999999975421 133344 44346777752 12
Q ss_pred C----HHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 022811 234 S----REDIAALVKEIMEGDKGKLIRQNVQDWRKKA 265 (291)
Q Consensus 234 ~----~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~ 265 (291)
+ .++++++|.++++++....|.+++.+.++.+
T Consensus 449 d~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~~f 484 (500)
T TIGR02918 449 DEDQIITALAEKIVEYFNSNDIDAFHEYSYQIAEGF 484 (500)
T ss_pred chhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhc
Confidence 2 7789999999996443355666666655444
No 84
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.38 E-value=0.013 Score=54.45 Aligned_cols=183 Identities=16% Similarity=0.109 Sum_probs=95.5
Q ss_pred HhhhcCccEEEEcCcccccHHHHHHHHhcCCCeEEEccccccCCCCCccccccccCCCCCCChhhHhhhccCCCCceEEE
Q 022811 30 VQNCLESSAIIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYV 109 (291)
Q Consensus 30 ~~~~~~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyv 109 (291)
...++.+|.+++.|- ...+..+...++++++..-.....-.. .. ...... ..+... +..+++
T Consensus 148 ~~~~~~ad~vi~~S~-----~l~~~~~~~~~~i~~i~ngvd~~~f~~------~~----~~~~~~-~~~~~~--~~~~i~ 209 (373)
T cd04950 148 RRLLKRADLVFTTSP-----SLYEAKRRLNPNVVLVPNGVDYEHFAA------AR----DPPPPP-ADLAAL--PRPVIG 209 (373)
T ss_pred HHHHHhCCEEEECCH-----HHHHHHhhCCCCEEEcccccCHHHhhc------cc----ccCCCh-hHHhcC--CCCEEE
Confidence 345678999998884 333444544466776654332110000 00 000000 112122 233555
Q ss_pred EcCCccc-CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCccc---ccCCCCcceEE
Q 022811 110 NYGSITV-MTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDK---VLSHPSVSVFL 185 (291)
Q Consensus 110 s~GS~~~-~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~---iL~h~~v~~fI 185 (291)
.+|+... ...+.+.+++.. ..+..|+++ +....... .... ...+|+.+.+++|..+ .|+++++..+-
T Consensus 210 y~G~l~~~~d~~ll~~la~~--~p~~~~vli-G~~~~~~~----~~~~--~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P 280 (373)
T cd04950 210 YYGAIAEWLDLELLEALAKA--RPDWSFVLI-GPVDVSID----PSAL--LRLPNVHYLGPKPYKELPAYLAGFDVAILP 280 (373)
T ss_pred EEeccccccCHHHHHHHHHH--CCCCEEEEE-CCCcCccC----hhHh--ccCCCEEEeCCCCHHHHHHHHHhCCEEecC
Confidence 5688763 333444444332 234555554 33200000 1111 1137899999998654 78888884432
Q ss_pred ------ecCC-chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 186 ------THGG-WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 186 ------tHgG-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
+.++ -+.+.|++++|+|+|+.++ ...+ +..+.+..+. -+.+++.++|.+++.++
T Consensus 281 ~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~-~~~~~~~~~~--~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 281 FRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVR-RYEDEVVLIA--DDPEEFVAAIEKALLED 341 (373)
T ss_pred CccchhhhcCCcchHHHHhccCCCEEecCc-------HHHH-hhcCcEEEeC--CCHHHHHHHHHHHHhcC
Confidence 2223 2458999999999998763 1222 3323233332 37999999999987644
No 85
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=97.37 E-value=0.0046 Score=58.31 Aligned_cols=91 Identities=13% Similarity=0.275 Sum_probs=61.9
Q ss_pred CCeEE-eeccCccc---ccCCCCcceEEe-c---CC---chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeC
Q 022811 162 DRGMI-ANWCPQDK---VLSHPSVSVFLT-H---GG---WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVN 230 (291)
Q Consensus 162 ~~~~v-~~w~pq~~---iL~h~~v~~fIt-H---gG---~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~ 230 (291)
+++.+ .+|+|..+ +|+.+++ +|. + -| -++++||+++|+|+|+... ......+ +.-+.|..+.
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv-~~~~~G~lv~ 366 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELV-KHGENGLVFG 366 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHh-cCCCCEEEEC
Confidence 35554 46887554 6888998 553 1 12 4479999999999999654 2344455 5556888873
Q ss_pred CCCCHHHHHHHHHHHHcC---Ch-HHHHHHHHHHHH
Q 022811 231 RDASREDIAALVKEIMEG---DK-GKLIRQNVQDWR 262 (291)
Q Consensus 231 ~~~~~~~l~~ai~~vl~~---~~-~~~~r~~a~~l~ 262 (291)
+.+++.++|.++++| ++ .+.|.+++++.+
T Consensus 367 ---d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 367 ---DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred ---CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 789999999999998 52 244555554443
No 86
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.36 E-value=0.009 Score=55.50 Aligned_cols=207 Identities=19% Similarity=0.160 Sum_probs=107.8
Q ss_pred cccccHHHHHHHHhcCCCeEEEc-cccccCCCCCccccccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHH
Q 022811 44 FDEHEGKVLEAIASKSPNIYTVG-PLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQM 122 (291)
Q Consensus 44 ~~~le~~~l~~~~~~~p~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~ 122 (291)
..-+|.+++ +...-++.||| |+........ .+....+.+ -.+++++|.+--||-.+--...+
T Consensus 140 ifPFE~~~y---~~~g~~~~~VGHPl~d~~~~~~-------------~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rll 202 (373)
T PF02684_consen 140 IFPFEPEFY---KKHGVPVTYVGHPLLDEVKPEP-------------DRAEAREKL-LDPDKPIIALLPGSRKSEIKRLL 202 (373)
T ss_pred CCcccHHHH---hccCCCeEEECCcchhhhccCC-------------CHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHH
Confidence 445666644 55555799999 7664322111 111222222 22457899999999853323333
Q ss_pred HHHHHHH---Hh--CCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeec-cCcccccCCCCcceEEecCCchhHHHH
Q 022811 123 KEFAWGL---AN--SGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANW-CPQDKVLSHPSVSVFLTHGGWNSILES 196 (291)
Q Consensus 123 ~~i~~~l---~~--~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w-~pq~~iL~h~~v~~fItHgG~~S~~Ea 196 (291)
..++++. .+ .+.+|++..-.. .....-.........+..+... -.-.+++..+++ .+.-+| ..++|+
T Consensus 203 P~~l~aa~~l~~~~p~l~fvvp~a~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SG-TaTLE~ 275 (373)
T PF02684_consen 203 PIFLEAAKLLKKQRPDLQFVVPVAPE----VHEELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASG-TATLEA 275 (373)
T ss_pred HHHHHHHHHHHHhCCCeEEEEecCCH----HHHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCC-HHHHHH
Confidence 3344443 32 345666554322 0001011111122233333222 233457878887 555444 467899
Q ss_pred HhcCCCeeeccc-ccchhHHHHHHHHH--hCc-----ceee-----CCCCCHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 022811 197 VCGGVPIICWPF-FAEQQTNCRYASTT--WGI-----GMEV-----NRDASREDIAALVKEIMEGDKGKLIRQNVQDWRK 263 (291)
Q Consensus 197 l~~GvP~i~~P~-~~DQ~~na~~v~~~--~G~-----G~~l-----~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~ 263 (291)
...|+|||++=- ..=.+.-|++++.. .|+ |..+ ....+++.+.+++.+++.|+ ..++..+...+
T Consensus 276 Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~---~~~~~~~~~~~ 352 (373)
T PF02684_consen 276 ALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENP---EKRKKQKELFR 352 (373)
T ss_pred HHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCH---HHHHHHHHHHH
Confidence 999999998632 22223345555211 111 1111 12689999999999999988 44555555555
Q ss_pred HHHHHHhcCCChHH
Q 022811 264 KAEAATDVGGASFN 277 (291)
Q Consensus 264 ~~~~a~~~gg~s~~ 277 (291)
.+++....|.++..
T Consensus 353 ~~~~~~~~~~~~~~ 366 (373)
T PF02684_consen 353 EIRQLLGPGASSRA 366 (373)
T ss_pred HHHHhhhhccCCHH
Confidence 55555555665544
No 87
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=97.34 E-value=0.0017 Score=62.61 Aligned_cols=139 Identities=17% Similarity=0.307 Sum_probs=89.6
Q ss_pred CCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHH---H---hcCCeEEeeccCccc-
Q 022811 102 EPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYE---E---IKDRGMIANWCPQDK- 174 (291)
Q Consensus 102 ~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~---~---~~~~~~v~~w~pq~~- 174 (291)
++..|||.+|-....++++.++.-++-|.+.+..++|..+.+-..+ ..|.. . -|+++.+.+-+.-.+
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge------~rf~ty~~~~Gl~p~riifs~va~k~eH 829 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE------QRFRTYAEQLGLEPDRIIFSPVAAKEEH 829 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch------HHHHHHHHHhCCCccceeeccccchHHH
Confidence 4567999999988888999988888889999999999998653221 11111 1 256666655443222
Q ss_pred ----ccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 175 ----VLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 175 ----iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.|..-.++-+.+. |..|.++.+++|||||.+|.-.--...|.......|+|..+.+ ++++-.+.--++-.|.
T Consensus 830 vrr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak--~~eEY~~iaV~Latd~ 905 (966)
T KOG4626|consen 830 VRRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAK--NREEYVQIAVRLATDK 905 (966)
T ss_pred HHhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhh--hHHHHHHHHHHhhcCH
Confidence 3333344446664 6889999999999999999744333333333356799987653 4454433333444444
No 88
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.31 E-value=0.0046 Score=57.15 Aligned_cols=91 Identities=13% Similarity=0.103 Sum_probs=62.8
Q ss_pred cCCeEEeeccCccc---ccCCCCcceEEecC---C-chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCC
Q 022811 161 KDRGMIANWCPQDK---VLSHPSVSVFLTHG---G-WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDA 233 (291)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~h~~v~~fItHg---G-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 233 (291)
.+++.+.+++|+.. +|..+++ ++... | ..+++||+++|+|+|+.-..+ ....+ ...+.|..+. .
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i-~~~~~g~~~~--~ 349 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETV-VDGETGFLCE--P 349 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHh-ccCCceEEeC--C
Confidence 46788999998763 7888888 55321 1 357899999999999974432 23344 3435677764 3
Q ss_pred CHHHHHHHHHHHHcCChH-HHHHHHHHH
Q 022811 234 SREDIAALVKEIMEGDKG-KLIRQNVQD 260 (291)
Q Consensus 234 ~~~~l~~ai~~vl~~~~~-~~~r~~a~~ 260 (291)
+.+++.++|.+++++++. ..+.+++++
T Consensus 350 ~~~~~a~~i~~l~~~~~~~~~~~~~a~~ 377 (392)
T cd03805 350 TPEEFAEAMLKLANDPDLADRMGAAGRK 377 (392)
T ss_pred CHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 789999999999988732 344444443
No 89
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.30 E-value=0.00072 Score=62.32 Aligned_cols=184 Identities=16% Similarity=0.133 Sum_probs=96.2
Q ss_pred CccEEEEcCcccccHHHHHHHHhc---CCCeEEEccccccCCCCCccccccccCCCCCCChhh--HhhhccCCCCceEEE
Q 022811 35 ESSAIIFNTFDEHEGKVLEAIASK---SPNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPEC--LKWLNEKEPNSVAYV 109 (291)
Q Consensus 35 ~~~~~l~ns~~~le~~~l~~~~~~---~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~wl~~~~~~~vvyv 109 (291)
-|++-|+.|- .+.+.+... ..+|+.||......-... ... ..... ...+.. .+++.+++
T Consensus 122 la~lhf~~t~-----~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~----~~~------~~~~~~~~~i~~~-~~~~~iLv 185 (346)
T PF02350_consen 122 LAHLHFAPTE-----EARERLLQEGEPPERIFVVGNPGIDALLQN----KEE------IEEKYKNSGILQD-APKPYILV 185 (346)
T ss_dssp H-SEEEESSH-----HHHHHHHHTT--GGGEEE---HHHHHHHHH----HHT------TCC-HHHHHHHHC-TTSEEEEE
T ss_pred hhhhhccCCH-----HHHHHHHhcCCCCCeEEEEChHHHHHHHHh----HHH------HhhhhhhHHHHhc-cCCCEEEE
Confidence 3678888883 444444432 237999997653211000 000 01111 122222 46789999
Q ss_pred EcCCcccCC----HHHHHHHHHHHHhC-CCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccC---cccccCCCCc
Q 022811 110 NYGSITVMT----DEQMKEFAWGLANS-GHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCP---QDKVLSHPSV 181 (291)
Q Consensus 110 s~GS~~~~~----~~~~~~i~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~p---q~~iL~h~~v 181 (291)
++=...... ...+.+++++|.+. ++++||.+...... ...+ ....... +|+.+.+-++ ...+|.++++
T Consensus 186 t~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~--~~~i-~~~l~~~-~~v~~~~~l~~~~~l~ll~~a~~ 261 (346)
T PF02350_consen 186 TLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRG--SDII-IEKLKKY-DNVRLIEPLGYEEYLSLLKNADL 261 (346)
T ss_dssp E-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHH--HHHH-HHHHTT--TTEEEE----HHHHHHHHHHESE
T ss_pred EeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchH--HHHH-HHHhccc-CCEEEECCCCHHHHHHHHhcceE
Confidence 984444333 34566667777665 78899988743110 0011 1112223 4888775554 4458889888
Q ss_pred ceEEecCCchhHH-HHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 182 SVFLTHGGWNSIL-ESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 182 ~~fItHgG~~S~~-Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
+||..| +++ ||.+.|+|.|.+ .|+...=.-+ + .|..+.+ ..+.++|.+++++++++.
T Consensus 262 --vvgdSs--GI~eEa~~lg~P~v~i---R~~geRqe~r-~-~~~nvlv--~~~~~~I~~ai~~~l~~~ 319 (346)
T PF02350_consen 262 --VVGDSS--GIQEEAPSLGKPVVNI---RDSGERQEGR-E-RGSNVLV--GTDPEAIIQAIEKALSDK 319 (346)
T ss_dssp --EEESSH--HHHHHGGGGT--EEEC---SSS-S-HHHH-H-TTSEEEE--TSSHHHHHHHHHHHHH-H
T ss_pred --EEEcCc--cHHHHHHHhCCeEEEe---cCCCCCHHHH-h-hcceEEe--CCCHHHHHHHHHHHHhCh
Confidence 999999 666 999999999999 2222222222 2 3555554 378999999999999763
No 90
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=97.26 E-value=0.0076 Score=54.59 Aligned_cols=149 Identities=13% Similarity=0.099 Sum_probs=83.0
Q ss_pred CCceEEEEcCCccc-CCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCccccccHHH---HH--HhcCCeEEeeccCcc-
Q 022811 103 PNSVAYVNYGSITV-MTDEQMKEFAWGLANS--GHPFLWIVRPDMVTGDSAILSQEF---YE--EIKDRGMIANWCPQD- 173 (291)
Q Consensus 103 ~~~vvyvs~GS~~~-~~~~~~~~i~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~---~~--~~~~~~~v~~w~pq~- 173 (291)
++..+++..|.... ...+.+-+.+..+... +..++++ +..... ..+...+ .. ...+++.+.+|.+..
T Consensus 183 ~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~iv-G~~~~~---~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 258 (355)
T cd03819 183 KGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIV-GDAQGR---RFYYAELLELIKRLGLQDRVTFVGHCSDMP 258 (355)
T ss_pred CCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEE-ECCccc---chHHHHHHHHHHHcCCcceEEEcCCcccHH
Confidence 34456677777652 2345555555555553 3444443 322110 0111111 11 124578888885544
Q ss_pred cccCCCCcceEEec--CC-chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHc-CC
Q 022811 174 KVLSHPSVSVFLTH--GG-WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIME-GD 249 (291)
Q Consensus 174 ~iL~h~~v~~fItH--gG-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~-~~ 249 (291)
.+|..+++.++-++ -| .++++||+++|+|+|+.-.. .....+ ..-+.|..+. .-+.+++.++|..++. ++
T Consensus 259 ~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~~e~i-~~~~~g~~~~-~~~~~~l~~~i~~~~~~~~ 332 (355)
T cd03819 259 AAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GARETV-RPGETGLLVP-PGDAEALAQALDQILSLLP 332 (355)
T ss_pred HHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC----CcHHHH-hCCCceEEeC-CCCHHHHHHHHHHHHhhCH
Confidence 38888888333331 22 46999999999999987543 233344 4434777775 4588999999976654 44
Q ss_pred h-HHHHHHHHHHH
Q 022811 250 K-GKLIRQNVQDW 261 (291)
Q Consensus 250 ~-~~~~r~~a~~l 261 (291)
+ ...+++++++.
T Consensus 333 ~~~~~~~~~a~~~ 345 (355)
T cd03819 333 EGRAKMFAKARMC 345 (355)
T ss_pred HHHHHHHHHHHHH
Confidence 2 13344444443
No 91
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=97.22 E-value=0.0021 Score=58.76 Aligned_cols=110 Identities=16% Similarity=0.309 Sum_probs=75.8
Q ss_pred hcCCeEEeeccCcccc---cCCCCcceEEecC-------C------chhHHHHHhcCCCeeecccccchhHHHHHHHHHh
Q 022811 160 IKDRGMIANWCPQDKV---LSHPSVSVFLTHG-------G------WNSILESVCGGVPIICWPFFAEQQTNCRYASTTW 223 (291)
Q Consensus 160 ~~~~~~v~~w~pq~~i---L~h~~v~~fItHg-------G------~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~ 223 (291)
..+|+.+.+|+|+.++ |.. +++++...- . -+-+.+++++|+|+|+++ +...+..+ ++.
T Consensus 205 ~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V-~~~ 278 (333)
T PRK09814 205 NSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFI-VEN 278 (333)
T ss_pred cCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHH-HhC
Confidence 3478999999998764 444 444333211 1 123778899999999975 35566667 677
Q ss_pred CcceeeCCCCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 022811 224 GIGMEVNRDASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCI 283 (291)
Q Consensus 224 G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v 283 (291)
++|+.++ +.+++.+++.++ .+++...|++|++++++.++. |--..+.+.+.+
T Consensus 279 ~~G~~v~---~~~el~~~l~~~-~~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~ 330 (333)
T PRK09814 279 GLGFVVD---SLEELPEIIDNI-TEEEYQEMVENVKKISKLLRN----GYFTKKALVDAI 330 (333)
T ss_pred CceEEeC---CHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHH
Confidence 9999986 667899999875 344456799999999999877 443334444443
No 92
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.14 E-value=0.0013 Score=51.44 Aligned_cols=80 Identities=18% Similarity=0.257 Sum_probs=50.1
Q ss_pred cCCeEEeeccCcc-cccCCCCcceEEec---CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHH
Q 022811 161 KDRGMIANWCPQD-KVLSHPSVSVFLTH---GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASRE 236 (291)
Q Consensus 161 ~~~~~v~~w~pq~-~iL~h~~v~~fItH---gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 236 (291)
.+|+.+.+|++.. .+++.+++.+..+. +-.+++.|++++|+|+|+.+.. ..... +..+.|..+ .-+.+
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~-~~~~~~~~~--~~~~~ 123 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIV-EEDGCGVLV--ANDPE 123 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE---TT-HH
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhhe-eecCCeEEE--CCCHH
Confidence 4689999998644 38899999666553 2348999999999999998751 11222 335777776 35899
Q ss_pred HHHHHHHHHHcC
Q 022811 237 DIAALVKEIMEG 248 (291)
Q Consensus 237 ~l~~ai~~vl~~ 248 (291)
++.++|.++++|
T Consensus 124 ~l~~~i~~l~~d 135 (135)
T PF13692_consen 124 ELAEAIERLLND 135 (135)
T ss_dssp HHHHHHHHHHH-
T ss_pred HHHHHHHHHhcC
Confidence 999999999865
No 93
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.14 E-value=0.0096 Score=52.79 Aligned_cols=136 Identities=13% Similarity=0.115 Sum_probs=75.3
Q ss_pred CCceEEEEcCCccc-CCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCccccccHHHHHH--hcCCeEEeeccCcc-ccc
Q 022811 103 PNSVAYVNYGSITV-MTDEQMKEFAWGLANS--GHPFLWIVRPDMVTGDSAILSQEFYEE--IKDRGMIANWCPQD-KVL 176 (291)
Q Consensus 103 ~~~vvyvs~GS~~~-~~~~~~~~i~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~w~pq~-~iL 176 (291)
++..+++..|+... ...+.+-+.+..+... +.+++++ +... ....+ ...... ..+++.+.+|.++. .++
T Consensus 187 ~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~-G~~~---~~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~ 261 (353)
T cd03811 187 PDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVIL-GDGP---LREEL-EALAKELGLADRVHFLGFQSNPYPYL 261 (353)
T ss_pred CCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEE-cCCc---cHHHH-HHHHHhcCCCccEEEecccCCHHHHH
Confidence 34567777787752 2223333334444332 3454443 3221 00011 111122 24577788887755 488
Q ss_pred CCCCcceEEec--CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHH---HHHHHHHHcCC
Q 022811 177 SHPSVSVFLTH--GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDI---AALVKEIMEGD 249 (291)
Q Consensus 177 ~h~~v~~fItH--gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l---~~ai~~vl~~~ 249 (291)
..+++-++-++ |..+++.||+++|+|+|+.... .....+ +.-+.|..++ .-+.+.+ .+++.+++.++
T Consensus 262 ~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i-~~~~~g~~~~-~~~~~~~~~~~~~i~~~~~~~ 333 (353)
T cd03811 262 KAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREIL-EDGENGLLVP-VGDEAALAAAALALLDLLLDP 333 (353)
T ss_pred HhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHh-cCCCceEEEC-CCCHHHHHHHHHHHHhccCCh
Confidence 88888333222 3356899999999999986543 444555 5556788775 4566777 44555555555
No 94
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=97.09 E-value=0.019 Score=53.67 Aligned_cols=79 Identities=16% Similarity=0.204 Sum_probs=54.8
Q ss_pred cCCeEEeeccCccc---ccCCCCcceEEec---CCc-hhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCC
Q 022811 161 KDRGMIANWCPQDK---VLSHPSVSVFLTH---GGW-NSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDA 233 (291)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~h~~v~~fItH---gG~-~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 233 (291)
.+++.+.+|+|+.+ +|+.+++ ||.- -|. .++.||+++|+|+|+-+..+ ....+ +. |.+.... .
T Consensus 249 ~~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i-~~-~~~~~~~--~ 318 (398)
T cd03796 249 QDRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVL-PP-DMILLAE--P 318 (398)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhe-eC-CceeecC--C
Confidence 45688889998643 8888888 5432 233 49999999999999987642 22334 33 4343332 3
Q ss_pred CHHHHHHHHHHHHcCC
Q 022811 234 SREDIAALVKEIMEGD 249 (291)
Q Consensus 234 ~~~~l~~ai~~vl~~~ 249 (291)
+.+++.+++.+++.+.
T Consensus 319 ~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 319 DVESIVRKLEEAISIL 334 (398)
T ss_pred CHHHHHHHHHHHHhCh
Confidence 7899999999999754
No 95
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.06 E-value=0.0057 Score=47.99 Aligned_cols=107 Identities=13% Similarity=0.051 Sum_probs=64.1
Q ss_pred EEEEcCCcccCCHHHHHH--HHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCe-EEeec--cCcc-cccCCCC
Q 022811 107 AYVNYGSITVMTDEQMKE--FAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRG-MIANW--CPQD-KVLSHPS 180 (291)
Q Consensus 107 vyvs~GS~~~~~~~~~~~--i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~w--~pq~-~iL~h~~ 180 (291)
+||+-||....-...+.. +.+-.+....++|..++... ..| -|+ .+.+| .+-. .+...++
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d------~kp--------vagl~v~~F~~~~kiQsli~dar 67 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGD------IKP--------VAGLRVYGFDKEEKIQSLIHDAR 67 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCC------ccc--------ccccEEEeechHHHHHHHhhcce
Confidence 688999984211111111 22212223457788887541 111 122 44443 3433 3666777
Q ss_pred cceEEecCCchhHHHHHhcCCCeeeccccc--------chhHHHHHHHHHhCcceeeC
Q 022811 181 VSVFLTHGGWNSILESVCGGVPIICWPFFA--------EQQTNCRYASTTWGIGMEVN 230 (291)
Q Consensus 181 v~~fItHgG~~S~~Eal~~GvP~i~~P~~~--------DQ~~na~~v~~~~G~G~~l~ 230 (291)
+ +|+|||.||++.++..++|.|++|--. +|..-|..+ .+.+.=+...
T Consensus 68 I--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~kl-ae~~~vv~~s 122 (161)
T COG5017 68 I--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKL-AEINYVVACS 122 (161)
T ss_pred E--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHH-HhcCceEEEc
Confidence 7 999999999999999999999999632 466666666 3445444443
No 96
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.96 E-value=0.015 Score=52.65 Aligned_cols=124 Identities=17% Similarity=0.229 Sum_probs=69.4
Q ss_pred EEEcCCcccCCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCccccccHHHH--HHhcCCeEEeeccCccc---ccCCCC
Q 022811 108 YVNYGSITVMTDEQMKEFAWGLANS--GHPFLWIVRPDMVTGDSAILSQEFY--EEIKDRGMIANWCPQDK---VLSHPS 180 (291)
Q Consensus 108 yvs~GS~~~~~~~~~~~i~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~w~pq~~---iL~h~~ 180 (291)
++..|+... .+.+..+++++... +.++++ ++..... ..+...+. ....+++.+.+++++.+ .+..++
T Consensus 196 i~~~G~~~~--~Kg~~~li~a~~~l~~~~~l~i-vG~~~~~---~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 196 YLLVGRIVP--ENNIDDLIEAFSKSNSGKKLVI-VGNADHN---TPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAA 269 (363)
T ss_pred EEEEecccc--cCCHHHHHHHHHhhccCceEEE-EcCCCCc---chHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCC
Confidence 345677652 23344455555544 355444 4432111 11112221 12347888899998864 666777
Q ss_pred cceEEecCCc-----hhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 181 VSVFLTHGGW-----NSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 181 v~~fItHgG~-----~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
+ ++.+.-. ++++||+++|+|+|+....+ +...+ +. .|..+.. .+.+.++|.++++++
T Consensus 270 ~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~-~~--~g~~~~~---~~~l~~~i~~l~~~~ 331 (363)
T cd04955 270 L--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVL-GD--KAIYFKV---GDDLASLLEELEADP 331 (363)
T ss_pred E--EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceee-cC--CeeEecC---chHHHHHHHHHHhCH
Confidence 7 5544333 57999999999999975432 12222 22 3444331 122999999999876
No 97
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=96.94 E-value=0.022 Score=54.09 Aligned_cols=83 Identities=16% Similarity=0.159 Sum_probs=57.4
Q ss_pred cCCeEEeeccCccc---ccCCC--CcceEEecC---C-chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC
Q 022811 161 KDRGMIANWCPQDK---VLSHP--SVSVFLTHG---G-WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR 231 (291)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~h~--~v~~fItHg---G-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~ 231 (291)
.+++.+.+++++.+ ++..+ +.++||... | -.+++||+++|+|+|+.... .....+ +.-..|..+.
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~g----g~~eiv-~~~~~G~lv~- 389 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDG----GPRDII-ANCRNGLLVD- 389 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCC----CcHHHh-cCCCcEEEeC-
Confidence 46677778877655 45544 123377543 3 45899999999999998653 234444 4434677775
Q ss_pred CCCHHHHHHHHHHHHcCC
Q 022811 232 DASREDIAALVKEIMEGD 249 (291)
Q Consensus 232 ~~~~~~l~~ai~~vl~~~ 249 (291)
.-+.+++.++|.++++|+
T Consensus 390 ~~d~~~la~~i~~ll~~~ 407 (439)
T TIGR02472 390 VLDLEAIASALEDALSDS 407 (439)
T ss_pred CCCHHHHHHHHHHHHhCH
Confidence 457899999999999887
No 98
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.94 E-value=0.035 Score=53.36 Aligned_cols=81 Identities=19% Similarity=0.254 Sum_probs=56.7
Q ss_pred cCCeEEeeccCcccccCCCCcceEEec----CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHh-----C-cceeeC
Q 022811 161 KDRGMIANWCPQDKVLSHPSVSVFLTH----GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTW-----G-IGMEVN 230 (291)
Q Consensus 161 ~~~~~v~~w~pq~~iL~h~~v~~fItH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~-----G-~G~~l~ 230 (291)
.+++.+.+...-..++..+++ ||.- |-.++++||+++|+|+|+-.. ......+ +.. | .|..+.
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv-~~~~~~~~g~~G~lv~ 425 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELI-EGADDEALGPAGEVVP 425 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHh-cCCcccccCCceEEEC
Confidence 467777774444558888887 5432 335689999999999999543 3334444 331 2 677665
Q ss_pred CCCCHHHHHHHHHHHHcCC
Q 022811 231 RDASREDIAALVKEIMEGD 249 (291)
Q Consensus 231 ~~~~~~~l~~ai~~vl~~~ 249 (291)
..+.+++.++|.++++|+
T Consensus 426 -~~d~~~la~ai~~ll~~~ 443 (475)
T cd03813 426 -PADPEALARAILRLLKDP 443 (475)
T ss_pred -CCCHHHHHHHHHHHhcCH
Confidence 467899999999999987
No 99
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=96.93 E-value=0.0033 Score=58.69 Aligned_cols=82 Identities=23% Similarity=0.198 Sum_probs=58.9
Q ss_pred CCeEEeeccCccc---ccCCCCcceEEec-CC-chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHH
Q 022811 162 DRGMIANWCPQDK---VLSHPSVSVFLTH-GG-WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASRE 236 (291)
Q Consensus 162 ~~~~v~~w~pq~~---iL~h~~v~~fItH-gG-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 236 (291)
+++.+.+++|+.+ +|..+++-++.+. .| .++++||+++|+|+|+... ......+ +.-..|..+. ..+.+
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i-~~~~~G~lv~-~~d~~ 354 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVI-TDGENGLLVD-FFDPD 354 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhc-ccCCceEEcC-CCCHH
Confidence 5788889998765 6778888333333 22 2489999999999998643 3344445 3334677664 45789
Q ss_pred HHHHHHHHHHcCC
Q 022811 237 DIAALVKEIMEGD 249 (291)
Q Consensus 237 ~l~~ai~~vl~~~ 249 (291)
++.++|.++++++
T Consensus 355 ~la~~i~~ll~~~ 367 (396)
T cd03818 355 ALAAAVIELLDDP 367 (396)
T ss_pred HHHHHHHHHHhCH
Confidence 9999999999887
No 100
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.87 E-value=0.051 Score=50.10 Aligned_cols=90 Identities=13% Similarity=0.091 Sum_probs=57.5
Q ss_pred cCCeEEeecc--Ccc---cccCCCCcceEEecC----CchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC
Q 022811 161 KDRGMIANWC--PQD---KVLSHPSVSVFLTHG----GWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR 231 (291)
Q Consensus 161 ~~~~~v~~w~--pq~---~iL~h~~v~~fItHg----G~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~ 231 (291)
.+++.+.++. ++. .+++.+++ |+.-. -..+++||+++|+|+|+....+ ....+ ..-..|..+.
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i-~~~~~g~~~~- 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQI-EDGETGFLVD- 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhc-ccCCceEEeC-
Confidence 3567777776 332 37788888 76533 2458999999999999976432 22334 3435566554
Q ss_pred CCCHHHHHHHHHHHHcCChH-HHHHHHHHH
Q 022811 232 DASREDIAALVKEIMEGDKG-KLIRQNVQD 260 (291)
Q Consensus 232 ~~~~~~l~~ai~~vl~~~~~-~~~r~~a~~ 260 (291)
+.+++..+|.+++.+++- +.+.+++++
T Consensus 323 --~~~~~a~~i~~ll~~~~~~~~~~~~a~~ 350 (372)
T cd03792 323 --TVEEAAVRILYLLRDPELRRKMGANARE 350 (372)
T ss_pred --CcHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 457788899999987621 334444443
No 101
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.87 E-value=0.033 Score=53.60 Aligned_cols=133 Identities=17% Similarity=0.200 Sum_probs=88.6
Q ss_pred CCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHH---H---hcCCeEEeeccCccc-
Q 022811 102 EPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYE---E---IKDRGMIANWCPQDK- 174 (291)
Q Consensus 102 ~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~---~---~~~~~~v~~w~pq~~- 174 (291)
+++.+||+||+......++.+..=++-|...+-.++|....+. .......+.+ + -.++.++.+=.|...
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~----~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h 502 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGD----DAEINARLRDLAEREGVDSERLRFLPPAPNEDH 502 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCC----cHHHHHHHHHHHHHcCCChhheeecCCCCCHHH
Confidence 4678999999999988898888888888888999999987641 1111122211 1 135566655444332
Q ss_pred --ccCCCCcceEE---ecCCchhHHHHHhcCCCeeecccccchhH--HHHHHHHHhCcceeeCCCCCHHHHHHHHH
Q 022811 175 --VLSHPSVSVFL---THGGWNSILESVCGGVPIICWPFFAEQQT--NCRYASTTWGIGMEVNRDASREDIAALVK 243 (291)
Q Consensus 175 --iL~h~~v~~fI---tHgG~~S~~Eal~~GvP~i~~P~~~DQ~~--na~~v~~~~G~G~~l~~~~~~~~l~~ai~ 243 (291)
=+.-+++ |+ --||..|..|+|..|||+|.++ ++||. |+..++...|+-..+- .-..+=++.+|+
T Consensus 503 ~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA-~s~~dYV~~av~ 573 (620)
T COG3914 503 RARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVA-DSRADYVEKAVA 573 (620)
T ss_pred HHhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhc-CCHHHHHHHHHH
Confidence 3445555 65 4699999999999999999985 67776 5555545556555443 223444666664
No 102
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=96.86 E-value=0.099 Score=51.28 Aligned_cols=207 Identities=13% Similarity=0.104 Sum_probs=105.0
Q ss_pred cccccHHHHHHHHhcCCCeEEEc-cccccCCCCCccccccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHH
Q 022811 44 FDEHEGKVLEAIASKSPNIYTVG-PLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQM 122 (291)
Q Consensus 44 ~~~le~~~l~~~~~~~p~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~ 122 (291)
...+|.++. +...-++.||| |+....... ....+..+-+.-.+++++|-+--||-.+.-...+
T Consensus 368 IfPFE~~~y---~~~gv~v~yVGHPL~d~i~~~-------------~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rll 431 (608)
T PRK01021 368 ILPFEQNLF---KDSPLRTVYLGHPLVETISSF-------------SPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNL 431 (608)
T ss_pred cCccCHHHH---HhcCCCeEEECCcHHhhcccC-------------CCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHH
Confidence 445666654 55666799999 665431100 0111222233333466899999999864334445
Q ss_pred HHHHHHHH--h--CCCCEEEEEcCCCCCCccccccHHHHHHhc-C---CeEEeeccCcccccCCCCcceEEecCCchhHH
Q 022811 123 KEFAWGLA--N--SGHPFLWIVRPDMVTGDSAILSQEFYEEIK-D---RGMIANWCPQDKVLSHPSVSVFLTHGGWNSIL 194 (291)
Q Consensus 123 ~~i~~~l~--~--~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~-~---~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~ 194 (291)
..++++.. . .+.+|+....+. ...+.+.+... . ++.+..--...++++.+++ .+.-+|. .++
T Consensus 432 Pv~l~aa~~~~l~~~l~fvvp~a~~-------~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTL 501 (608)
T PRK01021 432 TIQVQAFLASSLASTHQLLVSSANP-------KYDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVL 501 (608)
T ss_pred HHHHHHHHHHHhccCeEEEEecCch-------hhHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCCH-HHH
Confidence 55555554 2 234555533221 11111222121 1 1122210012467888887 6766665 568
Q ss_pred HHHhcCCCeeeccc-ccchhHHHHHHHHH----h-----CcceeeC-------CCCCHHHHHHHHHHHHcCChH-HHHHH
Q 022811 195 ESVCGGVPIICWPF-FAEQQTNCRYASTT----W-----GIGMEVN-------RDASREDIAALVKEIMEGDKG-KLIRQ 256 (291)
Q Consensus 195 Eal~~GvP~i~~P~-~~DQ~~na~~v~~~----~-----G~G~~l~-------~~~~~~~l~~ai~~vl~~~~~-~~~r~ 256 (291)
|+...|+|||++=- ..=-+.-++++... . =+|..+- .+.+++.|.+++ ++|.|++. +++++
T Consensus 502 EaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~ 580 (608)
T PRK01021 502 ETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKD 580 (608)
T ss_pred HHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHH
Confidence 99999999998521 11122234555320 0 0122211 257899999997 88887732 34444
Q ss_pred HHHHHHHHHHHHHhcCCChHHHHHH
Q 022811 257 NVQDWRKKAEAATDVGGASFNNFNK 281 (291)
Q Consensus 257 ~a~~l~~~~~~a~~~gg~s~~~~~~ 281 (291)
..+++.+.+ .+|.++-+....
T Consensus 581 ~l~~lr~~L----g~~~~~~~~~~~ 601 (608)
T PRK01021 581 ACRDLYQAM----NESASTMKECLS 601 (608)
T ss_pred HHHHHHHHh----cCCCCCHHHHHH
Confidence 444444443 445544443333
No 103
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=96.84 E-value=0.033 Score=50.45 Aligned_cols=80 Identities=20% Similarity=0.125 Sum_probs=57.0
Q ss_pred cCCeEEeeccCcc-cccCCCCcceEEec----CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCH
Q 022811 161 KDRGMIANWCPQD-KVLSHPSVSVFLTH----GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASR 235 (291)
Q Consensus 161 ~~~~~v~~w~pq~-~iL~h~~v~~fItH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 235 (291)
.+++.+.++..+. .++..+++ +|.- |-.++++||+++|+|+|+-...+ ....+ +. +.|.... .-+.
T Consensus 248 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i-~~-~~~~~~~-~~~~ 318 (358)
T cd03812 248 EDKVIFLGVRNDVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDL-TD-LVKFLSL-DESP 318 (358)
T ss_pred CCcEEEecccCCHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhh-cc-CccEEeC-CCCH
Confidence 4677888875553 48888888 4432 44678999999999999875533 33344 44 5555543 3457
Q ss_pred HHHHHHHHHHHcCC
Q 022811 236 EDIAALVKEIMEGD 249 (291)
Q Consensus 236 ~~l~~ai~~vl~~~ 249 (291)
+++.++|.++++++
T Consensus 319 ~~~a~~i~~l~~~~ 332 (358)
T cd03812 319 EIWAEEILKLKSED 332 (358)
T ss_pred HHHHHHHHHHHhCc
Confidence 99999999999988
No 104
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.75 E-value=0.023 Score=51.00 Aligned_cols=129 Identities=14% Similarity=0.046 Sum_probs=77.8
Q ss_pred eEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHH--hcCCeEEeeccCccc---ccCCCC
Q 022811 106 VAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEE--IKDRGMIANWCPQDK---VLSHPS 180 (291)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~w~pq~~---iL~h~~ 180 (291)
.+.+..|... ..+....+++++.+.+.+++++-.... ...+....... ..+++.+.+++++.+ +++.++
T Consensus 172 ~~i~~~Gr~~--~~Kg~~~li~~~~~~~~~l~i~G~~~~----~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d 245 (335)
T cd03802 172 DYLLFLGRIS--PEKGPHLAIRAARRAGIPLKLAGPVSD----PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNAR 245 (335)
T ss_pred CEEEEEEeec--cccCHHHHHHHHHhcCCeEEEEeCCCC----HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCc
Confidence 3445556663 223345566777777777665433221 01111111111 247888999998753 688888
Q ss_pred cceEEec--CC-chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcC
Q 022811 181 VSVFLTH--GG-WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEG 248 (291)
Q Consensus 181 v~~fItH--gG-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 248 (291)
+-++-+. -| ..+++||+++|+|+|+.... .+...+ +.-..|..+.. .+++.+++.+++..
T Consensus 246 ~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i-~~~~~g~l~~~---~~~l~~~l~~l~~~ 308 (335)
T cd03802 246 ALLFPILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVV-EDGVTGFLVDS---VEELAAAVARADRL 308 (335)
T ss_pred EEEeCCcccCCcchHHHHHHhcCCCEEEeCCC----Cchhhe-eCCCcEEEeCC---HHHHHHHHHHHhcc
Confidence 8333332 33 35899999999999988653 233344 44236777753 89999999988653
No 105
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=96.69 E-value=0.014 Score=54.37 Aligned_cols=76 Identities=18% Similarity=0.286 Sum_probs=60.4
Q ss_pred EEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCChH-HHHHHHHHHHH
Q 022811 184 FLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGDKG-KLIRQNVQDWR 262 (291)
Q Consensus 184 fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~-~~~r~~a~~l~ 262 (291)
|+-+||+| .+|++++|+|+|.=|+...|..-++++ ...|+|+.++ +.+.+.+++..+++|++. +.|.+++.++=
T Consensus 327 lv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l-~~~ga~~~v~---~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v 401 (419)
T COG1519 327 LVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERL-LQAGAGLQVE---DADLLAKAVELLLADEDKREAYGRAGLEFL 401 (419)
T ss_pred ccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHH-HhcCCeEEEC---CHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 45688887 789999999999999999999999999 6779999997 388899999888887633 44555544443
Q ss_pred HH
Q 022811 263 KK 264 (291)
Q Consensus 263 ~~ 264 (291)
+.
T Consensus 402 ~~ 403 (419)
T COG1519 402 AQ 403 (419)
T ss_pred HH
Confidence 33
No 106
>PLN02949 transferase, transferring glycosyl groups
Probab=96.65 E-value=0.086 Score=50.60 Aligned_cols=94 Identities=12% Similarity=0.047 Sum_probs=58.3
Q ss_pred cCCeEEeeccCccc---ccCCCCcceEEe---cCCc-hhHHHHHhcCCCeeecccccchhHHHHHHHHH-hC-cceeeCC
Q 022811 161 KDRGMIANWCPQDK---VLSHPSVSVFLT---HGGW-NSILESVCGGVPIICWPFFAEQQTNCRYASTT-WG-IGMEVNR 231 (291)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~h~~v~~fIt---HgG~-~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~-~G-~G~~l~~ 231 (291)
.+++.+.+++|+.+ +|+.+++ +|. +=|. .++.||+++|+|+|+....+-- ...+.+. -| .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~---~eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPK---MDIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCc---ceeeecCCCCcccccC--
Confidence 56788889987654 7888887 552 2233 3799999999999998653310 0011011 02 34433
Q ss_pred CCCHHHHHHHHHHHHcCC-h-HHHHHHHHHHHH
Q 022811 232 DASREDIAALVKEIMEGD-K-GKLIRQNVQDWR 262 (291)
Q Consensus 232 ~~~~~~l~~ai~~vl~~~-~-~~~~r~~a~~l~ 262 (291)
-+.+++.++|.++++++ + .+.+.+++++-.
T Consensus 407 -~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~ 438 (463)
T PLN02949 407 -TTVEEYADAILEVLRMRETERLEIAAAARKRA 438 (463)
T ss_pred -CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 27899999999999843 2 234555555433
No 107
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=96.32 E-value=0.14 Score=51.57 Aligned_cols=93 Identities=17% Similarity=0.172 Sum_probs=61.9
Q ss_pred cCCeEEeeccCccc-ccCCCCcceEEe---cCC-chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCC
Q 022811 161 KDRGMIANWCPQDK-VLSHPSVSVFLT---HGG-WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DAS 234 (291)
Q Consensus 161 ~~~~~v~~w~pq~~-iL~h~~v~~fIt---HgG-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~ 234 (291)
.+++.+.+|.++.. +|..+++ ||. +-| .++++||+++|+|+|+.... .....+ +.-..|..+.. +.+
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV-~dg~~GlLv~~~d~~ 645 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAV-QEGVTGLTLPADTVT 645 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHc-cCCCCEEEeCCCCCC
Confidence 46788888887654 8888888 553 334 56899999999999998653 244445 44346888864 556
Q ss_pred HHHHHHHHHHHHcCChH-HHHHHHHHH
Q 022811 235 REDIAALVKEIMEGDKG-KLIRQNVQD 260 (291)
Q Consensus 235 ~~~l~~ai~~vl~~~~~-~~~r~~a~~ 260 (291)
.+++.+++.+++.+... ..+++++++
T Consensus 646 ~~~La~aL~~ll~~l~~~~~l~~~ar~ 672 (694)
T PRK15179 646 APDVAEALARIHDMCAADPGIARKAAD 672 (694)
T ss_pred hHHHHHHHHHHHhChhccHHHHHHHHH
Confidence 67787887777653211 155555444
No 108
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.22 E-value=0.27 Score=46.68 Aligned_cols=175 Identities=11% Similarity=0.203 Sum_probs=99.0
Q ss_pred hhhccCCCCceEEEEcCCcccC------C----HHHHHHHHHHHHhCCCCEEEEEcCCCC---CCccccccHHHHHHhc-
Q 022811 96 KWLNEKEPNSVAYVNYGSITVM------T----DEQMKEFAWGLANSGHPFLWIVRPDMV---TGDSAILSQEFYEEIK- 161 (291)
Q Consensus 96 ~wl~~~~~~~vvyvs~GS~~~~------~----~~~~~~i~~~l~~~~~~~lw~~~~~~~---~~~~~~~~~~~~~~~~- 161 (291)
.|+.....+++|-|+....... . .+.+.++++.|.+.++++++.-..... ..++......+.+.++
T Consensus 226 ~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~ 305 (426)
T PRK10017 226 HWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSD 305 (426)
T ss_pred hhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhccc
Confidence 4554333456788875543311 1 133445666666678888876432100 0011111223333333
Q ss_pred -CCeEE-e-eccCcc--cccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCccee-eC-CCCC
Q 022811 162 -DRGMI-A-NWCPQD--KVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGME-VN-RDAS 234 (291)
Q Consensus 162 -~~~~v-~-~w~pq~--~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~-l~-~~~~ 234 (291)
.+..+ . .+-|.. .+++++++ +|.. =.-++.=|+..|||.+.+++ |..... .+ +.+|.... ++ ..++
T Consensus 306 ~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~-RlHa~I~a~~~gvP~i~i~Y--~~K~~~-~~-~~lg~~~~~~~~~~l~ 378 (426)
T PRK10017 306 PARYHVVMDELNDLEMGKILGACEL--TVGT-RLHSAIISMNFGTPAIAINY--EHKSAG-IM-QQLGLPEMAIDIRHLL 378 (426)
T ss_pred ccceeEecCCCChHHHHHHHhhCCE--EEEe-cchHHHHHHHcCCCEEEeee--hHHHHH-HH-HHcCCccEEechhhCC
Confidence 23333 2 233333 58888886 6653 46678889999999999998 444443 34 66787765 33 2678
Q ss_pred HHHHHHHHHHHHcCChH--HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 022811 235 REDIAALVKEIMEGDKG--KLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVL 287 (291)
Q Consensus 235 ~~~l~~ai~~vl~~~~~--~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 287 (291)
.+++.+.+.+++++.+. +.+++++.++++.. .+...++++.+.
T Consensus 379 ~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~~~----------~~~~~~~~~~~~ 423 (426)
T PRK10017 379 DGSLQAMVADTLGQLPALNARLAEAVSRERQTG----------MQMVQSVLERIG 423 (426)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHhc
Confidence 89999999999987642 33444444444433 344566666554
No 109
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=96.19 E-value=0.27 Score=46.51 Aligned_cols=79 Identities=16% Similarity=0.125 Sum_probs=55.2
Q ss_pred cCCeEEeeccCccc---ccCCCCcceEEe-----cCCchhHHHHHhcCCCeeecccccchhHHHHHHHH---HhCcceee
Q 022811 161 KDRGMIANWCPQDK---VLSHPSVSVFLT-----HGGWNSILESVCGGVPIICWPFFAEQQTNCRYAST---TWGIGMEV 229 (291)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~h~~v~~fIt-----HgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~---~~G~G~~l 229 (291)
.+++.+.+++|+.+ +|..+++ +|+ |- ..++.||+++|+|+|+.-..+.- ...+ + .-..|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~F-gi~~lEAMa~G~pvIa~~~ggp~---~~iv-~~~~~g~~G~l~ 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHF-GIGVVEYMAAGLIPLAHASGGPL---LDIV-VPWDGGPTGFLA 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCc-ccHHHHHHHcCCcEEEEcCCCCc---hhee-eccCCCCceEEe
Confidence 46788889988664 7888887 443 22 34889999999999986533211 1112 2 23467765
Q ss_pred CCCCCHHHHHHHHHHHHcCC
Q 022811 230 NRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 230 ~~~~~~~~l~~ai~~vl~~~ 249 (291)
. +.+++.++|.++++++
T Consensus 377 ~---d~~~la~ai~~ll~~~ 393 (419)
T cd03806 377 S---TAEEYAEAIEKILSLS 393 (419)
T ss_pred C---CHHHHHHHHHHHHhCC
Confidence 3 8999999999999865
No 110
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=96.18 E-value=0.1 Score=54.32 Aligned_cols=95 Identities=14% Similarity=0.137 Sum_probs=62.6
Q ss_pred cCCeEEeeccCccc---ccCCCC--cceEEecC---C-chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC
Q 022811 161 KDRGMIANWCPQDK---VLSHPS--VSVFLTHG---G-WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR 231 (291)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~h~~--v~~fItHg---G-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~ 231 (291)
.+++.+.+++++.+ ++..++ .++||.-. | -.+++||+++|+|+|+....+ ....+ +.-..|+.++
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII-~~g~nGlLVd- 620 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIH-RVLDNGLLVD- 620 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHh-ccCCcEEEEC-
Confidence 46677788887664 555442 12376642 3 458999999999999986532 22233 3335677775
Q ss_pred CCCHHHHHHHHHHHHcCChH-HHHHHHHHHH
Q 022811 232 DASREDIAALVKEIMEGDKG-KLIRQNVQDW 261 (291)
Q Consensus 232 ~~~~~~l~~ai~~vl~~~~~-~~~r~~a~~l 261 (291)
.-+.++|.++|.+++.|++- ..|.+++++.
T Consensus 621 P~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~ 651 (1050)
T TIGR02468 621 PHDQQAIADALLKLVADKQLWAECRQNGLKN 651 (1050)
T ss_pred CCCHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 45789999999999998742 3455555443
No 111
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=96.13 E-value=0.17 Score=49.40 Aligned_cols=114 Identities=13% Similarity=0.104 Sum_probs=66.4
Q ss_pred cCCeEEeeccCccc-ccCCCCcceEEec---CC-chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCH
Q 022811 161 KDRGMIANWCPQDK-VLSHPSVSVFLTH---GG-WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASR 235 (291)
Q Consensus 161 ~~~~~v~~w~pq~~-iL~h~~v~~fItH---gG-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 235 (291)
.+++.+.+|..+.. +|..+++ ||.. -| .++++||+++|+|+|+.... .+...+ ..-..|..++. -+.
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV-~dG~nG~LVp~-~D~ 525 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECF-IEGVSGFILDD-AQT 525 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHc-ccCCcEEEECC-CCh
Confidence 46788888865543 7888888 7753 34 56999999999999987652 344555 44467877763 344
Q ss_pred HHHHHHHH---HHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 022811 236 EDIAALVK---EIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLH 288 (291)
Q Consensus 236 ~~l~~ai~---~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~ 288 (291)
+.+.+++. ++.... +....+++..++.+.+.=|....+++..+-+.+
T Consensus 526 ~aLa~ai~lA~aL~~ll------~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 526 VNLDQACRYAEKLVNLW------RSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred hhHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 55555542 222211 112223333444343444555555555555443
No 112
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=96.02 E-value=0.16 Score=48.75 Aligned_cols=132 Identities=9% Similarity=-0.029 Sum_probs=73.7
Q ss_pred ceEEEEcCCccc-CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcc---cccCCCC
Q 022811 105 SVAYVNYGSITV-MTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQD---KVLSHPS 180 (291)
Q Consensus 105 ~vvyvs~GS~~~-~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~---~iL~h~~ 180 (291)
..+++..|.... ...+.+.+.+..+.+.+.+++++ +.... .....-..+..+.+.++.+....+.. .+++.++
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~~--~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 367 (473)
T TIGR02095 291 VPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVL-GTGDP--ELEEALRELAERYPGNVRVIIGYDEALAHLIYAGAD 367 (473)
T ss_pred CCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEE-CCCCH--HHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCC
Confidence 345566677752 23344444444444445666554 32210 00001112223345566665544543 3788888
Q ss_pred cceEEec---CCc-hhHHHHHhcCCCeeecccccchhHHHHHHHHHh------CcceeeCCCCCHHHHHHHHHHHHc
Q 022811 181 VSVFLTH---GGW-NSILESVCGGVPIICWPFFAEQQTNCRYASTTW------GIGMEVNRDASREDIAALVKEIME 247 (291)
Q Consensus 181 v~~fItH---gG~-~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~------G~G~~l~~~~~~~~l~~ai~~vl~ 247 (291)
+ ||.- -|. .+++||+++|+|.|+-...+ ....+ ... +.|..+. ..+.+++.++|.+++.
T Consensus 368 v--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v-~~~~~~~~~~~G~l~~-~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 368 F--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTV-VDGDPEAESGTGFLFE-EYDPGALLAALSRALR 436 (473)
T ss_pred E--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceE-ecCCCCCCCCceEEeC-CCCHHHHHHHHHHHHH
Confidence 8 6532 233 37899999999999875532 11122 222 6787775 4578999999999886
No 113
>PHA01633 putative glycosyl transferase group 1
Probab=95.96 E-value=0.31 Score=44.70 Aligned_cols=86 Identities=15% Similarity=0.127 Sum_probs=56.0
Q ss_pred hcCCeEEee---ccCcc---cccCCCCcceEEec---CC-chhHHHHHhcCCCeeeccc------ccch------hHHHH
Q 022811 160 IKDRGMIAN---WCPQD---KVLSHPSVSVFLTH---GG-WNSILESVCGGVPIICWPF------FAEQ------QTNCR 217 (291)
Q Consensus 160 ~~~~~~v~~---w~pq~---~iL~h~~v~~fItH---gG-~~S~~Eal~~GvP~i~~P~------~~DQ------~~na~ 217 (291)
.++++.+.+ ++++. .+++.+++ ||.- =| ..+++||+++|+|+|+--. .+|+ ..+..
T Consensus 199 l~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~ 276 (335)
T PHA01633 199 VPANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVE 276 (335)
T ss_pred CCCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHH
Confidence 456787774 44543 47888888 7653 23 4578999999999998633 2332 22332
Q ss_pred HHHH-HhCcceeeCCCCCHHHHHHHHHHHHcC
Q 022811 218 YAST-TWGIGMEVNRDASREDIAALVKEIMEG 248 (291)
Q Consensus 218 ~v~~-~~G~G~~l~~~~~~~~l~~ai~~vl~~ 248 (291)
..++ ..|.|..++ ..+++++.++|.+++..
T Consensus 277 ~~~~~~~g~g~~~~-~~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 277 EYYDKEHGQKWKIH-KFQIEDMANAIILAFEL 307 (335)
T ss_pred HhcCcccCceeeec-CCCHHHHHHHHHHHHhc
Confidence 2211 236666665 57999999999999653
No 114
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=95.94 E-value=0.0091 Score=44.53 Aligned_cols=53 Identities=15% Similarity=0.162 Sum_probs=43.9
Q ss_pred ChhhHhhhccCCCCceEEEEcCCcccC---CH--HHHHHHHHHHHhCCCCEEEEEcCC
Q 022811 91 DPECLKWLNEKEPNSVAYVNYGSITVM---TD--EQMKEFAWGLANSGHPFLWIVRPD 143 (291)
Q Consensus 91 ~~~~~~wl~~~~~~~vvyvs~GS~~~~---~~--~~~~~i~~~l~~~~~~~lw~~~~~ 143 (291)
...+..|+...+.++.|+||+||.... .. ..+..++++++..+..++..+...
T Consensus 27 ~~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~ 84 (97)
T PF06722_consen 27 PAVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAA 84 (97)
T ss_dssp SEEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTC
T ss_pred CCCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHH
Confidence 345667999888999999999998643 22 478999999999999999998754
No 115
>PRK14098 glycogen synthase; Provisional
Probab=95.90 E-value=0.23 Score=48.03 Aligned_cols=132 Identities=13% Similarity=0.024 Sum_probs=74.5
Q ss_pred eEEEEcCCccc-CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcc---cccCCCCc
Q 022811 106 VAYVNYGSITV-MTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQD---KVLSHPSV 181 (291)
Q Consensus 106 vvyvs~GS~~~-~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~---~iL~h~~v 181 (291)
.++...|.... ...+.+.+.+..+.+.+.+++.+ +.... .....-..+..+.++++.+..+++.. .+++.+++
T Consensus 308 ~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lviv-G~G~~--~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~a~aDi 384 (489)
T PRK14098 308 PLVGVIINFDDFQGAELLAESLEKLVELDIQLVIC-GSGDK--EYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAGLDM 384 (489)
T ss_pred CEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEE-eCCCH--HHHHHHHHHHHHCCCCEEEEEecCHHHHHHHHHhCCE
Confidence 45556666652 23344444444444445665544 43210 00011122333456788888887764 48888888
Q ss_pred ceEEecC---C-chhHHHHHhcCCCeeeccccc--chhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHH
Q 022811 182 SVFLTHG---G-WNSILESVCGGVPIICWPFFA--EQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIM 246 (291)
Q Consensus 182 ~~fItHg---G-~~S~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl 246 (291)
|+.-. | ..+.+||+++|+|.|+....+ |...+ .. +.-+.|..+. ..+.+++.++|.+++
T Consensus 385 --~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~-~~~~~G~l~~-~~d~~~la~ai~~~l 449 (489)
T PRK14098 385 --LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VS-EDKGSGFIFH-DYTPEALVAKLGEAL 449 (489)
T ss_pred --EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CC-CCCCceeEeC-CCCHHHHHHHHHHHH
Confidence 66432 2 237789999999888876432 22111 01 1236777775 467899999999876
No 116
>PLN02275 transferase, transferring glycosyl groups
Probab=95.87 E-value=0.066 Score=49.64 Aligned_cols=75 Identities=13% Similarity=0.261 Sum_probs=52.7
Q ss_pred CCeEEe-eccCccc---ccCCCCcceEEe-c---CC---chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeC
Q 022811 162 DRGMIA-NWCPQDK---VLSHPSVSVFLT-H---GG---WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVN 230 (291)
Q Consensus 162 ~~~~v~-~w~pq~~---iL~h~~v~~fIt-H---gG---~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~ 230 (291)
+|+.+. .|+|..+ +|+.+++ ||. + .| -++++||+++|+|+|+... ..+...+ +.-+.|..+.
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~----gg~~eiv-~~g~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIGELV-KDGKNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecC----CChHHHc-cCCCCeEEEC
Confidence 455554 4788765 5889998 663 1 12 3579999999999999753 2255555 5546888885
Q ss_pred CCCCHHHHHHHHHHHH
Q 022811 231 RDASREDIAALVKEIM 246 (291)
Q Consensus 231 ~~~~~~~l~~ai~~vl 246 (291)
+.+++.++|.+++
T Consensus 359 ---~~~~la~~i~~l~ 371 (371)
T PLN02275 359 ---SSSELADQLLELL 371 (371)
T ss_pred ---CHHHHHHHHHHhC
Confidence 5888999888764
No 117
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=95.85 E-value=0.075 Score=38.63 Aligned_cols=82 Identities=17% Similarity=0.128 Sum_probs=50.0
Q ss_pred cCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhC-cceeeCCCCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 022811 187 HGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWG-IGMEVNRDASREDIAALVKEIMEGDKGKLIRQNVQDWRKKA 265 (291)
Q Consensus 187 HgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~ 265 (291)
+|-..-+.|++++|+|+|+-+. ......+ +. | .++..+ +.+++.++|..+++|+ ..++ ++++..
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~-~~-~~~~~~~~---~~~el~~~i~~ll~~~---~~~~---~ia~~a 73 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIF-ED-GEHIITYN---DPEELAEKIEYLLENP---EERR---RIAKNA 73 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHc-CC-CCeEEEEC---CHHHHHHHHHHHHCCH---HHHH---HHHHHH
Confidence 4556689999999999999865 2223223 22 3 333333 8999999999999988 3222 233333
Q ss_pred HHHHhcCCChHHHHHHHH
Q 022811 266 EAATDVGGASFNNFNKCI 283 (291)
Q Consensus 266 ~~a~~~gg~s~~~~~~~v 283 (291)
++.+...-+...-+++++
T Consensus 74 ~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 333333445444444443
No 118
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=95.47 E-value=0.26 Score=47.07 Aligned_cols=137 Identities=12% Similarity=0.047 Sum_probs=72.4
Q ss_pred CceEEEEcCCccc-CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcc---cccCCC
Q 022811 104 NSVAYVNYGSITV-MTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQD---KVLSHP 179 (291)
Q Consensus 104 ~~vvyvs~GS~~~-~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~---~iL~h~ 179 (291)
+..+++..|.... ...+.+.+.+..+.+.+.+|+++-.... .....-..+..+.++++.+..-.++. .+++.+
T Consensus 295 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 371 (476)
T cd03791 295 DAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDP---EYEEALRELAARYPGRVAVLIGYDEALAHLIYAGA 371 (476)
T ss_pred CCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCH---HHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhC
Confidence 3445666677652 2334444444444444556555432210 00000111222234677654333332 367788
Q ss_pred CcceEEecC---C-chhHHHHHhcCCCeeeccccc--chhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHc
Q 022811 180 SVSVFLTHG---G-WNSILESVCGGVPIICWPFFA--EQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIME 247 (291)
Q Consensus 180 ~v~~fItHg---G-~~S~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~ 247 (291)
++ |+.-. | ..+.+||+++|+|+|+....+ |.-.+.... ..-|.|..+. ..+.+++.++|.+++.
T Consensus 372 Dv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~-~~~~~G~~~~-~~~~~~l~~~i~~~l~ 441 (476)
T cd03791 372 DF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNED-TGEGTGFVFE-GYNADALLAALRRALA 441 (476)
T ss_pred CE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCC-CCCCCeEEeC-CCCHHHHHHHHHHHHH
Confidence 87 55321 2 247899999999999876532 211111100 1224788876 4578999999999885
No 119
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=95.00 E-value=0.2 Score=46.56 Aligned_cols=128 Identities=16% Similarity=0.209 Sum_probs=77.7
Q ss_pred CceEEEEcCCcc---cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHh--cCCeEEeec---cCcccc
Q 022811 104 NSVAYVNYGSIT---VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEI--KDRGMIANW---CPQDKV 175 (291)
Q Consensus 104 ~~vvyvs~GS~~---~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~w---~pq~~i 175 (291)
++.++|.+=... ....+.+..++++|.+.+..+++++....... ....+.+.... .+++.+.+- .....+
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~~--~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~L 278 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAGS--RIINEAIEEYVNEHPNFRLFKSLGQERYLSL 278 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCCc--hHHHHHHHHHhcCCCCEEEECCCChHHHHHH
Confidence 467778775432 23457899999999887766666553221100 01111111111 357777654 444558
Q ss_pred cCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCccee-eCCCCCHHHHHHHHHHHH
Q 022811 176 LSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGME-VNRDASREDIAALVKEIM 246 (291)
Q Consensus 176 L~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~-l~~~~~~~~l~~ai~~vl 246 (291)
+.++++ +||-++.+- .||.+.|+|.|.+- +-+ .-+ + .|..+. + ..+.++|.+++.+++
T Consensus 279 l~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~---e~~-~-~g~nvl~v--g~~~~~I~~a~~~~~ 337 (365)
T TIGR03568 279 LKNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQ---KGR-L-RADSVIDV--DPDKEEIVKAIEKLL 337 (365)
T ss_pred HHhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCc---hhh-h-hcCeEEEe--CCCHHHHHHHHHHHh
Confidence 889998 998875555 99999999999763 211 111 2 243333 3 467899999999954
No 120
>PRK00654 glgA glycogen synthase; Provisional
Probab=94.79 E-value=1.1 Score=43.04 Aligned_cols=136 Identities=11% Similarity=0.056 Sum_probs=71.7
Q ss_pred ceEEEEcCCccc-CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEE-eeccCcc--cccCCCC
Q 022811 105 SVAYVNYGSITV-MTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMI-ANWCPQD--KVLSHPS 180 (291)
Q Consensus 105 ~vvyvs~GS~~~-~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~w~pq~--~iL~h~~ 180 (291)
..+++..|.... ...+.+.+.+..+.+.+.+++++-.... .....-..+..+.+.++.+ .+|-.+. .+++.++
T Consensus 282 ~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~---~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aD 358 (466)
T PRK00654 282 APLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDP---ELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGAD 358 (466)
T ss_pred CcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcH---HHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCC
Confidence 445666677652 2233333333333334667766532110 0000111222334556543 4563232 4788888
Q ss_pred cceEEec---CCc-hhHHHHHhcCCCeeeccccc--chhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHc
Q 022811 181 VSVFLTH---GGW-NSILESVCGGVPIICWPFFA--EQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIME 247 (291)
Q Consensus 181 v~~fItH---gG~-~S~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~ 247 (291)
+ ||.- -|. .+++||+++|+|.|+....+ |.-.+...- ..-+.|..+. .-+.+++.++|.+++.
T Consensus 359 v--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~-~~~~~G~lv~-~~d~~~la~~i~~~l~ 427 (466)
T PRK00654 359 M--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPE-DGEATGFVFD-DFNAEDLLRALRRALE 427 (466)
T ss_pred E--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCC-CCCCceEEeC-CCCHHHHHHHHHHHHH
Confidence 8 6542 233 48899999999999865421 211111000 1126788876 4578999999999886
No 121
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=94.63 E-value=1.1 Score=41.41 Aligned_cols=217 Identities=13% Similarity=0.078 Sum_probs=105.9
Q ss_pred ccEEEEcCcccccHHHHHHHHhcCCCeEEEc-cccccCCCCCccccccccCCCCCCChhhHhhhccCCCCceEEEEcCCc
Q 022811 36 SSAIIFNTFDEHEGKVLEAIASKSPNIYTVG-PLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSI 114 (291)
Q Consensus 36 ~~~~l~ns~~~le~~~l~~~~~~~p~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~ 114 (291)
+|.+++ +.-+|++++ +...-++.||| |+....+-. .......+-+....++.++.+--||-
T Consensus 137 ~D~lLa--ilPFE~~~y---~k~g~~~~yVGHpl~d~i~~~-------------~~r~~ar~~l~~~~~~~~lalLPGSR 198 (381)
T COG0763 137 VDHLLA--ILPFEPAFY---DKFGLPCTYVGHPLADEIPLL-------------PDREAAREKLGIDADEKTLALLPGSR 198 (381)
T ss_pred hhHeee--ecCCCHHHH---HhcCCCeEEeCChhhhhcccc-------------ccHHHHHHHhCCCCCCCeEEEecCCc
Confidence 454442 334566644 44333489999 554322100 11122333344445678999999998
Q ss_pred ccCCHHHH---HHHHHHHHh--CCCCEEEEEcCCCCCCccccccHHHHHHhcCCe-EEeecc-Ccc--cccCCCCcceEE
Q 022811 115 TVMTDEQM---KEFAWGLAN--SGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRG-MIANWC-PQD--KVLSHPSVSVFL 185 (291)
Q Consensus 115 ~~~~~~~~---~~i~~~l~~--~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~w~-pq~--~iL~h~~v~~fI 185 (291)
.+--...+ .+.++.|.. .+.+|+.-+... ......... ...+. ...-++ ++. .++..+++ .+
T Consensus 199 ~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~aD~--al 269 (381)
T COG0763 199 RSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNA----KYRRIIEEA---LKWEVAGLSLILIDGEKRKAFAAADA--AL 269 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcH----HHHHHHHHH---hhccccCceEEecCchHHHHHHHhhH--HH
Confidence 64222233 333333331 346766654322 101111111 11111 111122 222 26666776 55
Q ss_pred ecCCchhHHHHHhcCCCeeecccc-cchhHHHHHHHHHhCc-------ceeeC-----CCCCHHHHHHHHHHHHcCChH-
Q 022811 186 THGGWNSILESVCGGVPIICWPFF-AEQQTNCRYASTTWGI-------GMEVN-----RDASREDIAALVKEIMEGDKG- 251 (291)
Q Consensus 186 tHgG~~S~~Eal~~GvP~i~~P~~-~DQ~~na~~v~~~~G~-------G~~l~-----~~~~~~~l~~ai~~vl~~~~~- 251 (291)
.-+|. -++|+..+|+|||+.=-. .=-+.-+++...-.=+ |..+- ...+++.|.+++..++.|++.
T Consensus 270 ~aSGT-~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~ 348 (381)
T COG0763 270 AASGT-ATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRR 348 (381)
T ss_pred HhccH-HHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhH
Confidence 55554 468999999999985210 0011123322111111 11111 258899999999999988722
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 022811 252 KLIRQNVQDWRKKAEAATDVGGASFNNFNKCIK 284 (291)
Q Consensus 252 ~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~ 284 (291)
..+++..+++...++. ++++...++-+++
T Consensus 349 ~~~~~~~~~l~~~l~~----~~~~e~aA~~vl~ 377 (381)
T COG0763 349 EALKEKFRELHQYLRE----DPASEIAAQAVLE 377 (381)
T ss_pred HHHHHHHHHHHHHHcC----CcHHHHHHHHHHH
Confidence 4566666666666544 4444444444443
No 122
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=94.42 E-value=1.1 Score=41.04 Aligned_cols=139 Identities=20% Similarity=0.198 Sum_probs=80.1
Q ss_pred CCChhhHhhhccCCCCceEEEEcCCcc----cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCe
Q 022811 89 KEDPECLKWLNEKEPNSVAYVNYGSIT----VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRG 164 (291)
Q Consensus 89 ~~~~~~~~wl~~~~~~~vvyvs~GS~~----~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
..|.+..+-+... +++.|++=+-+.. ......+.++++.|++.+..++..-+.. ...+.+ +.. ++
T Consensus 165 ~Pd~~vl~~lg~~-~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~-------~~~~~~-~~~--~~ 233 (335)
T PF04007_consen 165 KPDPEVLKELGLD-DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYE-------DQRELF-EKY--GV 233 (335)
T ss_pred CCChhHHHHcCCC-CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCc-------chhhHH-hcc--Cc
Confidence 3455666666633 5678887776642 2234567789999988877644443322 111111 111 22
Q ss_pred EE-eeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHH
Q 022811 165 MI-ANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVK 243 (291)
Q Consensus 165 ~v-~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~ 243 (291)
.+ ..-++-.++|.++++ ||+=|| ....||...|+|.|.+ +-++-...-+.+.+ .|. .. ...+.+++.+.|+
T Consensus 234 ~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~-~Gl--l~-~~~~~~ei~~~v~ 305 (335)
T PF04007_consen 234 IIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIE-KGL--LY-HSTDPDEIVEYVR 305 (335)
T ss_pred cccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHH-CCC--eE-ecCCHHHHHHHHH
Confidence 22 233444579999998 998666 7889999999999974 21222222233423 354 32 2456777777665
Q ss_pred HHH
Q 022811 244 EIM 246 (291)
Q Consensus 244 ~vl 246 (291)
+.+
T Consensus 306 ~~~ 308 (335)
T PF04007_consen 306 KNL 308 (335)
T ss_pred Hhh
Confidence 544
No 123
>PHA01630 putative group 1 glycosyl transferase
Probab=94.30 E-value=0.69 Score=42.33 Aligned_cols=77 Identities=14% Similarity=0.185 Sum_probs=46.1
Q ss_pred ccCccc---ccCCCCcceEEecC-C-chhHHHHHhcCCCeeeccccc--chhH---HHHHHHHH-----------hCcce
Q 022811 169 WCPQDK---VLSHPSVSVFLTHG-G-WNSILESVCGGVPIICWPFFA--EQQT---NCRYASTT-----------WGIGM 227 (291)
Q Consensus 169 w~pq~~---iL~h~~v~~fItHg-G-~~S~~Eal~~GvP~i~~P~~~--DQ~~---na~~v~~~-----------~G~G~ 227 (291)
++|..+ ++..+++-++-++. | ..++.||+++|+|+|+.-..+ |... |+..+ +. .++|.
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv-~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWI-KSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEe-eecccccccccCCccccc
Confidence 355443 68888883322332 2 568999999999999976532 3211 21111 10 23565
Q ss_pred eeCCCCCHHHHHHHHHHHHcC
Q 022811 228 EVNRDASREDIAALVKEIMEG 248 (291)
Q Consensus 228 ~l~~~~~~~~l~~ai~~vl~~ 248 (291)
.+. .+.+++.+++.++|.+
T Consensus 276 ~v~--~~~~~~~~~ii~~l~~ 294 (331)
T PHA01630 276 FLD--PDIEDAYQKLLEALAN 294 (331)
T ss_pred ccC--CCHHHHHHHHHHHHhC
Confidence 554 3677788888888876
No 124
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=93.28 E-value=7.8 Score=36.97 Aligned_cols=186 Identities=15% Similarity=0.170 Sum_probs=107.3
Q ss_pred HHHHHHhhhcCccEEEEcCcccccHHHHHHHHhcCC-----CeEEEccccccCCCCCccccccccCCCCCCChhhHhhhc
Q 022811 25 YMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASKSP-----NIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLN 99 (291)
Q Consensus 25 ~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~p-----~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~ 99 (291)
.+.-.+....+.+++++.|-.+-+ .++..++ .+.++|-+.... ..
T Consensus 229 ny~~~l~~~~~~~~iIv~T~~q~~-----di~~r~~~~~~~~~ip~g~i~~~~-------------------------~~ 278 (438)
T TIGR02919 229 NMKLLLDNETRNKKIIIPNKNEYE-----KIKELLDNEYQEQISQLGYLYPFK-------------------------KD 278 (438)
T ss_pred HHHHHhcCccccCeEEeCCHHHHH-----HHHHHhCcccCceEEEEEEEEeec-------------------------cc
Confidence 444445556788999999943221 1122222 467777774210 11
Q ss_pred cCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCC-CCEEEEEcCCCCCCccccccHHHHHHhcCCeEE-eeccC-cc-cc
Q 022811 100 EKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSG-HPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMI-ANWCP-QD-KV 175 (291)
Q Consensus 100 ~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~-~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~w~p-q~-~i 175 (291)
.+.+..+++++ +...++.+.....+.+ ..|=....... ...+ ..+ .+. +|+.+ .++.+ +. .+
T Consensus 279 ~r~~~~~l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te~----s~kL-~~L-~~y-~nvvly~~~~~~~l~~l 344 (438)
T TIGR02919 279 NKYRKQALILT-------NSDQIEHLEEIVQALPDYHFHIAALTEM----SSKL-MSL-DKY-DNVKLYPNITTQKIQEL 344 (438)
T ss_pred cCCcccEEEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCcc----cHHH-HHH-Hhc-CCcEEECCcChHHHHHH
Confidence 22345577776 2555666666555544 44433322210 0111 122 233 56654 56677 33 49
Q ss_pred cCCCCcceEEecCC--chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCChHHH
Q 022811 176 LSHPSVSVFLTHGG--WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGDKGKL 253 (291)
Q Consensus 176 L~h~~v~~fItHgG--~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~ 253 (291)
+..+++-+-|+|+. ..++.||+.+|+|++..=.... +...+ .. |..+. .-+.+++.++|+++|.+++ .
T Consensus 345 y~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~---~~~~i-~~---g~l~~-~~~~~~m~~~i~~lL~d~~--~ 414 (438)
T TIGR02919 345 YQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAH---NRDFI-AS---ENIFE-HNEVDQLISKLKDLLNDPN--Q 414 (438)
T ss_pred HHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccC---Ccccc-cC---Cceec-CCCHHHHHHHHHHHhcCHH--H
Confidence 99999988889976 6799999999999999753322 22223 22 44443 4578999999999998772 3
Q ss_pred HHHHHHHHHHH
Q 022811 254 IRQNVQDWRKK 264 (291)
Q Consensus 254 ~r~~a~~l~~~ 264 (291)
++++..+-++-
T Consensus 415 ~~~~~~~q~~~ 425 (438)
T TIGR02919 415 FRELLEQQREH 425 (438)
T ss_pred HHHHHHHHHHH
Confidence 55554444333
No 125
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=92.65 E-value=0.31 Score=47.49 Aligned_cols=91 Identities=9% Similarity=0.131 Sum_probs=64.4
Q ss_pred CCeEEeeccC--cc-cccCCCCcceEEecC---CchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCH
Q 022811 162 DRGMIANWCP--QD-KVLSHPSVSVFLTHG---GWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASR 235 (291)
Q Consensus 162 ~~~~v~~w~p--q~-~iL~h~~v~~fItHg---G~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 235 (291)
.++.+.++.. +. .++..+.+ +|.=+ |.++.+||+.+|+|+| .......| +...=|..+. +.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V-~d~~NG~li~---d~ 475 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYV-EHNKNGYIID---DI 475 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceee-EcCCCcEEeC---CH
Confidence 4566778777 33 37877777 77655 6779999999999999 22334445 4546677773 78
Q ss_pred HHHHHHHHHHHcCChH-HHHHHHHHHHHHHH
Q 022811 236 EDIAALVKEIMEGDKG-KLIRQNVQDWRKKA 265 (291)
Q Consensus 236 ~~l~~ai~~vl~~~~~-~~~r~~a~~l~~~~ 265 (291)
.+|.++|..+|.+.+. ..+...+-+.+...
T Consensus 476 ~~l~~al~~~L~~~~~wn~~~~~sy~~~~~y 506 (519)
T TIGR03713 476 SELLKALDYYLDNLKNWNYSLAYSIKLIDDY 506 (519)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence 9999999999998743 55556665555554
No 126
>PLN02846 digalactosyldiacylglycerol synthase
Probab=92.62 E-value=3.7 Score=39.42 Aligned_cols=73 Identities=11% Similarity=0.137 Sum_probs=50.8
Q ss_pred EeeccCcccccCCCCcceEEecC----CchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHH
Q 022811 166 IANWCPQDKVLSHPSVSVFLTHG----GWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAAL 241 (291)
Q Consensus 166 v~~w~pq~~iL~h~~v~~fItHg----G~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~a 241 (291)
+.++.+...++...++ ||.-+ =.++++||+++|+|+|+.-..+ | ..+ ..-+.|... -+.+++.++
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v-~~~~ng~~~---~~~~~~a~a 356 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFF-KQFPNCRTY---DDGKGFVRA 356 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-cee-ecCCceEec---CCHHHHHHH
Confidence 4455555568888887 87653 3578999999999999986433 2 233 333445444 268899999
Q ss_pred HHHHHcCC
Q 022811 242 VKEIMEGD 249 (291)
Q Consensus 242 i~~vl~~~ 249 (291)
|.++|.++
T Consensus 357 i~~~l~~~ 364 (462)
T PLN02846 357 TLKALAEE 364 (462)
T ss_pred HHHHHccC
Confidence 99999854
No 127
>PLN02501 digalactosyldiacylglycerol synthase
Probab=92.35 E-value=3.7 Score=41.42 Aligned_cols=76 Identities=16% Similarity=0.132 Sum_probs=51.7
Q ss_pred CeEEeeccCccc-ccCCCCcceEEec----CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHH
Q 022811 163 RGMIANWCPQDK-VLSHPSVSVFLTH----GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASRED 237 (291)
Q Consensus 163 ~~~v~~w~pq~~-iL~h~~v~~fItH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 237 (291)
++.+.++.++.. ++...++ ||.- +=.++++||+++|+|+|+.-.-+... + ...+.|. +. -+.++
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V-~~g~nGl-l~--~D~Ea 670 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----F-RSFPNCL-TY--KTSED 670 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----E-eecCCeE-ec--CCHHH
Confidence 355566666553 8888887 6652 22568899999999999987654221 2 2212333 22 46899
Q ss_pred HHHHHHHHHcCC
Q 022811 238 IAALVKEIMEGD 249 (291)
Q Consensus 238 l~~ai~~vl~~~ 249 (291)
+.++|.++|.++
T Consensus 671 fAeAI~~LLsd~ 682 (794)
T PLN02501 671 FVAKVKEALANE 682 (794)
T ss_pred HHHHHHHHHhCc
Confidence 999999999877
No 128
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=92.09 E-value=1.7 Score=41.65 Aligned_cols=103 Identities=12% Similarity=0.046 Sum_probs=64.5
Q ss_pred eccCccc---ccCCCCcceEEe---cCCc-hhHHHHHhcCCC----eeecccccchhHHHHHHHHHhCcceeeCCCCCHH
Q 022811 168 NWCPQDK---VLSHPSVSVFLT---HGGW-NSILESVCGGVP----IICWPFFAEQQTNCRYASTTWGIGMEVNRDASRE 236 (291)
Q Consensus 168 ~w~pq~~---iL~h~~v~~fIt---HgG~-~S~~Eal~~GvP----~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 236 (291)
+.+++.+ +++.+++ |+. +=|+ .++.||+++|+| +|+--+.+- +.. ++.|+.++ ..+.+
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~~~----l~~gllVn-P~d~~ 410 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----AQE----LNGALLVN-PYDID 410 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----hHH----hCCcEEEC-CCCHH
Confidence 4455554 6788888 664 3354 477899999999 666544321 222 23577775 46889
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 022811 237 DIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVL 287 (291)
Q Consensus 237 ~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 287 (291)
+++++|.++++.+.. ..+++.+++.+.+.. -+...=++++++.|.
T Consensus 411 ~lA~aI~~aL~~~~~-er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 411 GMADAIARALTMPLE-EREERHRAMMDKLRK-----NDVQRWREDFLSDLN 455 (456)
T ss_pred HHHHHHHHHHcCCHH-HHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhh
Confidence 999999999986522 344444444444433 255555666776664
No 129
>PLN02316 synthase/transferase
Probab=91.50 E-value=5.4 Score=42.07 Aligned_cols=113 Identities=6% Similarity=-0.043 Sum_probs=64.5
Q ss_pred cCCeEEeeccCcc---cccCCCCcceEEecC----CchhHHHHHhcCCCeeeccccc--chhHH-------HHHHHHHhC
Q 022811 161 KDRGMIANWCPQD---KVLSHPSVSVFLTHG----GWNSILESVCGGVPIICWPFFA--EQQTN-------CRYASTTWG 224 (291)
Q Consensus 161 ~~~~~v~~w~pq~---~iL~h~~v~~fItHg----G~~S~~Eal~~GvP~i~~P~~~--DQ~~n-------a~~v~~~~G 224 (291)
++++.+....+.. .+++.+++ |+.-. =-.+.+||+++|+|.|+-...+ |.... +... ..-+
T Consensus 899 ~~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~-g~~~ 975 (1036)
T PLN02316 899 HDRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQ-GLEP 975 (1036)
T ss_pred CCeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhcccccccccccccc-ccCC
Confidence 3566665444543 47888887 77432 2458899999999888765422 22211 1100 0124
Q ss_pred cceeeCCCCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 022811 225 IGMEVNRDASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKC 282 (291)
Q Consensus 225 ~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~ 282 (291)
.|..+. ..+++.|..+|.+++.+ |......+++..++++...=|-...+.+.
T Consensus 976 tGflf~-~~d~~aLa~AL~raL~~-----~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y 1027 (1036)
T PLN02316 976 NGFSFD-GADAAGVDYALNRAISA-----WYDGRDWFNSLCKRVMEQDWSWNRPALDY 1027 (1036)
T ss_pred ceEEeC-CCCHHHHHHHHHHHHhh-----hhhhHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 677775 56788999999999974 22333334444554444333333333333
No 130
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=91.18 E-value=1.5 Score=39.78 Aligned_cols=39 Identities=18% Similarity=0.319 Sum_probs=32.4
Q ss_pred CcccccCCCCcceEEecCCchhHHHHHhcCCCeeeccccc
Q 022811 171 PQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFA 210 (291)
Q Consensus 171 pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~ 210 (291)
|...+|+.++. .|||=-..+.+.||++.|+|+.++|.-.
T Consensus 221 Py~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 221 PYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred cHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCC
Confidence 55568888886 5677777889999999999999999865
No 131
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=90.67 E-value=1.6 Score=36.08 Aligned_cols=48 Identities=21% Similarity=0.238 Sum_probs=35.8
Q ss_pred cCCeEEeeccCcc---c-ccCCCCcceEEecCC----chhHHHHHhcCCCeeeccccc
Q 022811 161 KDRGMIANWCPQD---K-VLSHPSVSVFLTHGG----WNSILESVCGGVPIICWPFFA 210 (291)
Q Consensus 161 ~~~~~v~~w~pq~---~-iL~h~~v~~fItHgG----~~S~~Eal~~GvP~i~~P~~~ 210 (291)
..|+.+.++++.. . ++..+++ +|+-.. .+++.||+++|+|+|+.+...
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 4688888886322 2 4444777 777665 789999999999999987644
No 132
>PRK10125 putative glycosyl transferase; Provisional
Probab=89.75 E-value=7.6 Score=36.52 Aligned_cols=101 Identities=13% Similarity=0.050 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHhCCCCE-EEEEcCCCCCCccccccHHHHHHhcCCeEEeeccC-c---ccccCCCCcceEEec----CCc
Q 022811 120 EQMKEFAWGLANSGHPF-LWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCP-Q---DKVLSHPSVSVFLTH----GGW 190 (291)
Q Consensus 120 ~~~~~i~~~l~~~~~~~-lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~p-q---~~iL~h~~v~~fItH----gG~ 190 (291)
.....+++++...+..+ ++.++... +. ...++...++.. + ..+++.+++ ||.- |-.
T Consensus 256 Kg~~~li~A~~~l~~~~~L~ivG~g~--------~~-----~~~~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Egfp 320 (405)
T PRK10125 256 KTDQQLVREMMALGDKIELHTFGKFS--------PF-----TAGNVVNHGFETDKRKLMSALNQMDA--LVFSSRVDNYP 320 (405)
T ss_pred ccHHHHHHHHHhCCCCeEEEEEcCCC--------cc-----cccceEEecCcCCHHHHHHHHHhCCE--EEECCccccCc
Confidence 33466777777654332 44555321 00 123455455543 2 235666777 6543 335
Q ss_pred hhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHH
Q 022811 191 NSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALV 242 (291)
Q Consensus 191 ~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai 242 (291)
++++||+++|+|+|+....+ ....+ +. +.|..+. .-+.++|++++
T Consensus 321 ~vilEAmA~G~PVVat~~gG----~~Eiv-~~-~~G~lv~-~~d~~~La~~~ 365 (405)
T PRK10125 321 LILCEALSIGVPVIATHSDA----AREVL-QK-SGGKTVS-EEEVLQLAQLS 365 (405)
T ss_pred CHHHHHHHcCCCEEEeCCCC----hHHhE-eC-CcEEEEC-CCCHHHHHhcc
Confidence 68999999999999997754 22233 43 5788876 34677777654
No 133
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=89.67 E-value=2.6 Score=39.14 Aligned_cols=89 Identities=16% Similarity=0.207 Sum_probs=66.3
Q ss_pred CeEEe---eccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHH
Q 022811 163 RGMIA---NWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIA 239 (291)
Q Consensus 163 ~~~v~---~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~ 239 (291)
|+.+. +|.+...++.++-+ ++|-.|. -.-||...|+|.+++=...+++. .+ + .|.-+.+ ..+.+.+.
T Consensus 263 ~v~li~pl~~~~f~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE---~v-~-agt~~lv--g~~~~~i~ 332 (383)
T COG0381 263 RVKLIDPLGYLDFHNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE---GV-E-AGTNILV--GTDEENIL 332 (383)
T ss_pred cEEEeCCcchHHHHHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc---ce-e-cCceEEe--CccHHHHH
Confidence 46654 57777789999877 8888764 46789999999999988888887 33 3 3555555 46789999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHHH
Q 022811 240 ALVKEIMEGDKGKLIRQNVQDWRKK 264 (291)
Q Consensus 240 ~ai~~vl~~~~~~~~r~~a~~l~~~ 264 (291)
+++.++++++ ...+|+.....-
T Consensus 333 ~~~~~ll~~~---~~~~~m~~~~np 354 (383)
T COG0381 333 DAATELLEDE---EFYERMSNAKNP 354 (383)
T ss_pred HHHHHHhhCh---HHHHHHhcccCC
Confidence 9999999988 666665544433
No 134
>PLN02939 transferase, transferring glycosyl groups
Probab=89.50 E-value=11 Score=39.40 Aligned_cols=84 Identities=5% Similarity=-0.005 Sum_probs=54.4
Q ss_pred cCCeEEeeccCcc---cccCCCCcceEEecC----CchhHHHHHhcCCCeeeccccc--chhHH--HHHHHHHhCcceee
Q 022811 161 KDRGMIANWCPQD---KVLSHPSVSVFLTHG----GWNSILESVCGGVPIICWPFFA--EQQTN--CRYASTTWGIGMEV 229 (291)
Q Consensus 161 ~~~~~v~~w~pq~---~iL~h~~v~~fItHg----G~~S~~Eal~~GvP~i~~P~~~--DQ~~n--a~~v~~~~G~G~~l 229 (291)
.+++.+..+.+.. .+++.+++ ||.-. -..+++||+++|+|.|+....+ |-..+ ...+.+.-+.|..+
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf 913 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF 913 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe
Confidence 3567777877764 48888888 77532 2347899999999999876533 22211 11111122567776
Q ss_pred CCCCCHHHHHHHHHHHHc
Q 022811 230 NRDASREDIAALVKEIME 247 (291)
Q Consensus 230 ~~~~~~~~l~~ai~~vl~ 247 (291)
. ..+.+++..+|.+++.
T Consensus 914 ~-~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 914 L-TPDEQGLNSALERAFN 930 (977)
T ss_pred c-CCCHHHHHHHHHHHHH
Confidence 5 3578889999988774
No 135
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=87.11 E-value=3.8 Score=36.88 Aligned_cols=138 Identities=12% Similarity=0.129 Sum_probs=79.1
Q ss_pred hhhccCCCCceEEEEcCCcc---cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEee--cc
Q 022811 96 KWLNEKEPNSVAYVNYGSIT---VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIAN--WC 170 (291)
Q Consensus 96 ~wl~~~~~~~vvyvs~GS~~---~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--w~ 170 (291)
+|+....+++.|.+..|+.. ..+.+.+.++++.|.+.++++++..+.. .+....+.+.+..+.. .+.+ -+
T Consensus 171 ~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~----~e~~~~~~i~~~~~~~-~l~g~~sL 245 (319)
T TIGR02193 171 AFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGND----AEKQRAERIAEALPGA-VVLPKMSL 245 (319)
T ss_pred hhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCH----HHHHHHHHHHhhCCCC-eecCCCCH
Confidence 45543334556666666532 5678899999999987678877654432 1111222233323322 2322 23
Q ss_pred Ccc-cccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCccee-eC----CCCCHHHHHHHHHH
Q 022811 171 PQD-KVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGME-VN----RDASREDIAALVKE 244 (291)
Q Consensus 171 pq~-~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~-l~----~~~~~~~l~~ai~~ 244 (291)
+|. .+++++++ ||+. -.|.++=|.+.|+|+|++ |+ +.+..+. .-+|-... +. ..++++++.+++++
T Consensus 246 ~el~ali~~a~l--~I~~-DSgp~HlAaa~g~P~i~l--fg--~t~p~~~-~P~~~~~~~~~~~~~~~I~~~~V~~ai~~ 317 (319)
T TIGR02193 246 AEVAALLAGADA--VVGV-DTGLTHLAAALDKPTVTL--YG--ATDPGRT-GGYGKPNVALLGESGANPTPDEVLAALEE 317 (319)
T ss_pred HHHHHHHHcCCE--EEeC-CChHHHHHHHcCCCEEEE--EC--CCCHhhc-ccCCCCceEEccCccCCCCHHHHHHHHHh
Confidence 344 48888888 8885 577888889999999986 22 1111111 11222211 11 26889999999887
Q ss_pred HH
Q 022811 245 IM 246 (291)
Q Consensus 245 vl 246 (291)
+|
T Consensus 318 ~~ 319 (319)
T TIGR02193 318 LL 319 (319)
T ss_pred hC
Confidence 64
No 136
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=87.04 E-value=3.2 Score=39.82 Aligned_cols=73 Identities=16% Similarity=0.152 Sum_probs=47.8
Q ss_pred EeeccCccc---ccCCCCcceEEe---cCCc-hhHHHHHhcCCC----eeecccccchhHHHHHHHHHhCcceeeCCCCC
Q 022811 166 IANWCPQDK---VLSHPSVSVFLT---HGGW-NSILESVCGGVP----IICWPFFAEQQTNCRYASTTWGIGMEVNRDAS 234 (291)
Q Consensus 166 v~~w~pq~~---iL~h~~v~~fIt---HgG~-~S~~Eal~~GvP----~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 234 (291)
+.+++++.+ +++.+++ ||. +-|+ .++.||+++|+| +|+--..+ + . +....|..++ ..+
T Consensus 345 ~~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G-----~--~-~~~~~g~lv~-p~d 413 (460)
T cd03788 345 LYRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAG-----A--A-EELSGALLVN-PYD 413 (460)
T ss_pred EeCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEecccc-----c--h-hhcCCCEEEC-CCC
Confidence 346667654 6888888 553 3354 467999999999 54442211 0 1 1123466665 467
Q ss_pred HHHHHHHHHHHHcCC
Q 022811 235 REDIAALVKEIMEGD 249 (291)
Q Consensus 235 ~~~l~~ai~~vl~~~ 249 (291)
.++++++|.++++++
T Consensus 414 ~~~la~ai~~~l~~~ 428 (460)
T cd03788 414 IDEVADAIHRALTMP 428 (460)
T ss_pred HHHHHHHHHHHHcCC
Confidence 899999999999866
No 137
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=84.10 E-value=6.2 Score=40.41 Aligned_cols=80 Identities=11% Similarity=0.086 Sum_probs=50.5
Q ss_pred cCCeEEeecc-Ccc---cccCC-CC-cceEEecC----CchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeC
Q 022811 161 KDRGMIANWC-PQD---KVLSH-PS-VSVFLTHG----GWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVN 230 (291)
Q Consensus 161 ~~~~~v~~w~-pq~---~iL~h-~~-v~~fItHg----G~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~ 230 (291)
.+++.+.++. +.. .++.+ ++ .++||.=. -..+++||+++|+|+|+.-.. .....+ ..-..|..++
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G----G~~EiV-~dg~tGfLVd 692 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG----GPLEII-QDGVSGFHID 692 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHh-cCCCcEEEeC
Confidence 3667777764 322 24432 21 12266432 245899999999999996543 344455 4435688886
Q ss_pred CCCCHHHHHHHHHHHH
Q 022811 231 RDASREDIAALVKEIM 246 (291)
Q Consensus 231 ~~~~~~~l~~ai~~vl 246 (291)
..+.+++.++|.+++
T Consensus 693 -p~D~eaLA~aL~~ll 707 (784)
T TIGR02470 693 -PYHGEEAAEKIVDFF 707 (784)
T ss_pred -CCCHHHHHHHHHHHH
Confidence 357889999999876
No 138
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=83.65 E-value=5.3 Score=35.23 Aligned_cols=95 Identities=16% Similarity=0.213 Sum_probs=59.8
Q ss_pred CceEEEEcCCcc---cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHh-cCCeE-Eeec--cCc-ccc
Q 022811 104 NSVAYVNYGSIT---VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEI-KDRGM-IANW--CPQ-DKV 175 (291)
Q Consensus 104 ~~vvyvs~GS~~---~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~-~~~~~-v~~w--~pq-~~i 175 (291)
++.|.+..|+.. ..+.+.+.++++.|.+.++++++..+++ + ......+.+.. ..++. +.+- +.+ ..+
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~----e-~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~l 195 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA----E-RELAEEIAAALGGPRVVNLAGKTSLRELAAL 195 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh----h-HHHHHHHHHhcCCCccccCcCCCCHHHHHHH
Confidence 456777777753 5678899999999987788887664432 1 11222222222 12222 2221 222 348
Q ss_pred cCCCCcceEEecCCchhHHHHHhcCCCeeec
Q 022811 176 LSHPSVSVFLTHGGWNSILESVCGGVPIICW 206 (291)
Q Consensus 176 L~h~~v~~fItHgG~~S~~Eal~~GvP~i~~ 206 (291)
+.++++ +|+.-. |.++=|.+.|+|+|++
T Consensus 196 i~~~~l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 196 LARADL--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred HHhCCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 888888 999753 6777778999999886
No 139
>PRK14099 glycogen synthase; Provisional
Probab=83.03 E-value=29 Score=33.56 Aligned_cols=87 Identities=7% Similarity=0.079 Sum_probs=48.1
Q ss_pred hcCCe-EEeeccCccc-cc-CCCCcceEEe---cCC-chhHHHHHhcCCCeeeccccc--chhHHHHHHHHH--hCccee
Q 022811 160 IKDRG-MIANWCPQDK-VL-SHPSVSVFLT---HGG-WNSILESVCGGVPIICWPFFA--EQQTNCRYASTT--WGIGME 228 (291)
Q Consensus 160 ~~~~~-~v~~w~pq~~-iL-~h~~v~~fIt---HgG-~~S~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~--~G~G~~ 228 (291)
.++++ .+.+|-.+.. .+ +.+++ ||. +=| ..+.+||+++|+|.|+....+ |--.+.....+. -+.|..
T Consensus 348 ~~~~v~~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l 425 (485)
T PRK14099 348 YPGQIGVVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQ 425 (485)
T ss_pred CCCCEEEEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEE
Confidence 34555 3556633332 33 45676 664 223 347789999997766654321 321111000011 146777
Q ss_pred eCCCCCHHHHHHHHHH---HHcCC
Q 022811 229 VNRDASREDIAALVKE---IMEGD 249 (291)
Q Consensus 229 l~~~~~~~~l~~ai~~---vl~~~ 249 (291)
+. ..+.+++.++|.+ +++|+
T Consensus 426 ~~-~~d~~~La~ai~~a~~l~~d~ 448 (485)
T PRK14099 426 FS-PVTADALAAALRKTAALFADP 448 (485)
T ss_pred eC-CCCHHHHHHHHHHHHHHhcCH
Confidence 75 4578999999987 55555
No 140
>PLN00142 sucrose synthase
Probab=82.03 E-value=9.3 Score=39.29 Aligned_cols=57 Identities=11% Similarity=0.186 Sum_probs=39.0
Q ss_pred EEec---CCc-hhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHH
Q 022811 184 FLTH---GGW-NSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIM 246 (291)
Q Consensus 184 fItH---gG~-~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl 246 (291)
||.- =|. .+++||+++|+|+|+.... .....+ +.-..|..++ .-+.+++.++|.+++
T Consensus 670 fVlPS~~EgFGLvvLEAMA~GlPVVATdvG----G~~EIV-~dG~tG~LV~-P~D~eaLA~aI~~lL 730 (815)
T PLN00142 670 FVQPALYEAFGLTVVEAMTCGLPTFATCQG----GPAEII-VDGVSGFHID-PYHGDEAANKIADFF 730 (815)
T ss_pred EEeCCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHh-cCCCcEEEeC-CCCHHHHHHHHHHHH
Confidence 6643 343 4899999999999997543 344455 4434688876 357788888887654
No 141
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=78.93 E-value=9.8 Score=39.24 Aligned_cols=98 Identities=14% Similarity=0.129 Sum_probs=58.2
Q ss_pred cccCCCCcceEEec---CCch-hHHHHHhcCCC---eeecccccchhHHHHHHHHHhC-cceeeCCCCCHHHHHHHHHHH
Q 022811 174 KVLSHPSVSVFLTH---GGWN-SILESVCGGVP---IICWPFFAEQQTNCRYASTTWG-IGMEVNRDASREDIAALVKEI 245 (291)
Q Consensus 174 ~iL~h~~v~~fItH---gG~~-S~~Eal~~GvP---~i~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~l~~ai~~v 245 (291)
.+++.+++ ||.- -|+| +.+|++++|.| ++++.-+. ..+. .+| .|+.++ ..+.++++++|.++
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~---G~~~----~l~~~allVn-P~D~~~lA~AI~~a 440 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFA---GAGQ----SLGAGALLVN-PWNITEVSSAIKEA 440 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCc---Cchh----hhcCCeEEEC-CCCHHHHHHHHHHH
Confidence 47888888 6543 4766 66899999999 44444221 1121 234 567776 46889999999999
Q ss_pred HcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 022811 246 MEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVL 287 (291)
Q Consensus 246 l~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 287 (291)
|+.+.. ..+++.+++.+.++.. +...-.+.|++.|.
T Consensus 441 L~m~~~-er~~r~~~~~~~v~~~-----~~~~Wa~~fl~~l~ 476 (797)
T PLN03063 441 LNMSDE-ERETRHRHNFQYVKTH-----SAQKWADDFMSELN 476 (797)
T ss_pred HhCCHH-HHHHHHHHHHHhhhhC-----CHHHHHHHHHHHHH
Confidence 984321 2334444444444331 33444555555554
No 142
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=78.64 E-value=6.5 Score=38.76 Aligned_cols=74 Identities=15% Similarity=0.162 Sum_probs=43.4
Q ss_pred cccCCCCcceEEe-cCCc-hhHHHHHhcCCCeeeccccc-chhHHHHHHHHHh-CcceeeCC------CCCHHHHHHHHH
Q 022811 174 KVLSHPSVSVFLT-HGGW-NSILESVCGGVPIICWPFFA-EQQTNCRYASTTW-GIGMEVNR------DASREDIAALVK 243 (291)
Q Consensus 174 ~iL~h~~v~~fIt-HgG~-~S~~Eal~~GvP~i~~P~~~-DQ~~na~~v~~~~-G~G~~l~~------~~~~~~l~~ai~ 243 (291)
+++..+++.+|=+ +=|+ .+++||+++|+|+|+-...+ ..... ..+ ..- ..|+.+.. .-+.++|.+++.
T Consensus 470 E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v-~~~~~~gi~V~~r~~~~~~e~v~~La~~m~ 547 (590)
T cd03793 470 EFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHI-EDPESYGIYIVDRRFKSPDESVQQLTQYMY 547 (590)
T ss_pred HHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHh-ccCCCceEEEecCCccchHHHHHHHHHHHH
Confidence 3555667733322 3454 48899999999999987632 22222 112 111 25777652 234577888888
Q ss_pred HHHcCC
Q 022811 244 EIMEGD 249 (291)
Q Consensus 244 ~vl~~~ 249 (291)
++++.+
T Consensus 548 ~~~~~~ 553 (590)
T cd03793 548 EFCQLS 553 (590)
T ss_pred HHhCCc
Confidence 887544
No 143
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=76.62 E-value=7.4 Score=34.24 Aligned_cols=42 Identities=19% Similarity=0.224 Sum_probs=32.2
Q ss_pred eEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeeccc
Q 022811 164 GMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPF 208 (291)
Q Consensus 164 ~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~ 208 (291)
+.+..-++-.++|.+++. +||-.+ ..-+||+.+|+|++++..
T Consensus 185 ~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 185 VIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFGR 226 (269)
T ss_pred EEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEecC
Confidence 344556677789999987 777654 477999999999999764
No 144
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=76.14 E-value=39 Score=27.20 Aligned_cols=137 Identities=17% Similarity=0.183 Sum_probs=66.9
Q ss_pred eEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcceEE
Q 022811 106 VAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVFL 185 (291)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~fI 185 (291)
.|-|-+||.. +...++++...|++.+..+-..+-.- ...|+.+.+-. .-+.+...+.||
T Consensus 2 ~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~sa------HR~p~~l~~~~-------------~~~~~~~~~viI 60 (150)
T PF00731_consen 2 KVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASA------HRTPERLLEFV-------------KEYEARGADVII 60 (150)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--T------TTSHHHHHHHH-------------HHTTTTTESEEE
T ss_pred eEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHHHHH-------------HHhccCCCEEEE
Confidence 3556677775 56778888889988886554443321 12344332211 011122233488
Q ss_pred ecCCchhH----HHHHhcCCCeeecccccchhH----HHHHHHHHhCcceeeCCCCCHHHHHHHHHHHH--cCChHHHHH
Q 022811 186 THGGWNSI----LESVCGGVPIICWPFFAEQQT----NCRYASTTWGIGMEVNRDASREDIAALVKEIM--EGDKGKLIR 255 (291)
Q Consensus 186 tHgG~~S~----~Eal~~GvP~i~~P~~~DQ~~----na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl--~~~~~~~~r 255 (291)
+=.|...- .-++. -.|+|.+|....+.. ....+.---|+++..-.--+...-.-...++| .|+ .++
T Consensus 61 a~AG~~a~Lpgvva~~t-~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~~~~nAA~~A~~ILa~~d~---~l~ 136 (150)
T PF00731_consen 61 AVAGMSAALPGVVASLT-TLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGINNGFNAALLAARILALKDP---ELR 136 (150)
T ss_dssp EEEESS--HHHHHHHHS-SS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SSTHHHHHHHHHHHHHHTT-H---HHH
T ss_pred EECCCcccchhhheecc-CCCEEEeecCcccccCcccHHHHHhccCCCCceEEEccCchHHHHHHHHHHhcCCH---HHH
Confidence 87775533 33333 679999998766442 12223222255544322013333333334454 355 788
Q ss_pred HHHHHHHHHHHH
Q 022811 256 QNVQDWRKKAEA 267 (291)
Q Consensus 256 ~~a~~l~~~~~~ 267 (291)
++.+..+++.++
T Consensus 137 ~kl~~~~~~~~~ 148 (150)
T PF00731_consen 137 EKLRAYREKMKE 148 (150)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 887777777654
No 145
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=75.45 E-value=23 Score=32.20 Aligned_cols=98 Identities=15% Similarity=0.204 Sum_probs=62.2
Q ss_pred CCceEEEEcCCcc---cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcC-CeE-Eee--ccCcc-c
Q 022811 103 PNSVAYVNYGSIT---VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKD-RGM-IAN--WCPQD-K 174 (291)
Q Consensus 103 ~~~vvyvs~GS~~---~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~-~~~-v~~--w~pq~-~ 174 (291)
.++.|.+..|+.. ..+.+.+.++++.|...++++++.-++.. .+....+.+.+..+. ++. +.+ -+.+. .
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~---~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~a 256 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDK---DELAMVNEIAQGCQTPRVTSLAGKLTLPQLAA 256 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCH---HHHHHHHHHHhhCCCCcccccCCCCCHHHHHH
Confidence 4567778877753 46788999999999877888776543220 001112222222222 222 222 23334 3
Q ss_pred ccCCCCcceEEecCCchhHHHHHhcCCCeeec
Q 022811 175 VLSHPSVSVFLTHGGWNSILESVCGGVPIICW 206 (291)
Q Consensus 175 iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~ 206 (291)
+++++++ ||+. -.|-++=|.+.|+|.|++
T Consensus 257 li~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 257 LIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred HHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 8888888 9997 688899999999999986
No 146
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=73.67 E-value=57 Score=27.91 Aligned_cols=80 Identities=19% Similarity=0.349 Sum_probs=51.4
Q ss_pred CCeEEeeccCc---ccccCCCCcceEEec---CCch-hHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCC
Q 022811 162 DRGMIANWCPQ---DKVLSHPSVSVFLTH---GGWN-SILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDAS 234 (291)
Q Consensus 162 ~~~~v~~w~pq---~~iL~h~~v~~fItH---gG~~-S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 234 (291)
.++.+.+++++ ..++..+++ ++.- .|.+ ++.||+++|+|+|..... .....+ ...+.|. +....+
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~-~~~~~g~-~~~~~~ 328 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVV-EDGETGL-LVPPGD 328 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHh-cCCCceE-ecCCCC
Confidence 56777888882 236766766 5444 3544 369999999999877542 222233 3322366 332336
Q ss_pred HHHHHHHHHHHHcCC
Q 022811 235 REDIAALVKEIMEGD 249 (291)
Q Consensus 235 ~~~l~~ai~~vl~~~ 249 (291)
.+++..++..++++.
T Consensus 329 ~~~~~~~i~~~~~~~ 343 (381)
T COG0438 329 VEELADALEQLLEDP 343 (381)
T ss_pred HHHHHHHHHHHhcCH
Confidence 899999999999876
No 147
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=72.35 E-value=6.4 Score=33.82 Aligned_cols=98 Identities=11% Similarity=0.141 Sum_probs=53.5
Q ss_pred CCceEEEEcCCcc---cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCC-eEEeec--cCc-ccc
Q 022811 103 PNSVAYVNYGSIT---VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDR-GMIANW--CPQ-DKV 175 (291)
Q Consensus 103 ~~~vvyvs~GS~~---~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~w--~pq-~~i 175 (291)
+++.|.+..|+.. ..+.+.+.++++.|.+.++.++...+... ......+.+....+.+ +.+.+- +.+ ..+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~al 180 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEE---QEKEIADQIAAGLQNPVINLAGKTSLRELAAL 180 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHH---HHHHHHHHHHTTHTTTTEEETTTS-HHHHHHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchH---HHHHHHHHHHHhcccceEeecCCCCHHHHHHH
Confidence 4677888888764 56788999999999887766655443220 0011111111122222 223222 233 348
Q ss_pred cCCCCcceEEecCCchhHHHHHhcCCCeeec
Q 022811 176 LSHPSVSVFLTHGGWNSILESVCGGVPIICW 206 (291)
Q Consensus 176 L~h~~v~~fItHgG~~S~~Eal~~GvP~i~~ 206 (291)
+.++++ ||+. ..|.++=|.+.|+|+|++
T Consensus 181 i~~a~~--~I~~-Dtg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 181 ISRADL--VIGN-DTGPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHTSSE--EEEE-SSHHHHHHHHTT--EEEE
T ss_pred HhcCCE--EEec-CChHHHHHHHHhCCEEEE
Confidence 888887 8885 467888999999999998
No 148
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=70.99 E-value=30 Score=31.28 Aligned_cols=96 Identities=11% Similarity=0.091 Sum_probs=60.6
Q ss_pred CCceEEEEcCCc-c---cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeE-Eee--ccCcc-c
Q 022811 103 PNSVAYVNYGSI-T---VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGM-IAN--WCPQD-K 174 (291)
Q Consensus 103 ~~~vvyvs~GS~-~---~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~--w~pq~-~ 174 (291)
.++.|.+.-|+. . ..+.+.+.++++.|.+.+++++..-++. + ....+.+.+..+.+.. +.+ -+.+. .
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~----e-~~~~~~i~~~~~~~~~~l~g~~sL~el~a 247 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAK----D-HPAGNEIEALLPGELRNLAGETSLDEAVD 247 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChh----h-HHHHHHHHHhCCcccccCCCCCCHHHHHH
Confidence 467888888774 2 5678899999999877777776553322 1 1122233333333322 222 22333 4
Q ss_pred ccCCCCcceEEecCCchhHHHHHhcCCCeeec
Q 022811 175 VLSHPSVSVFLTHGGWNSILESVCGGVPIICW 206 (291)
Q Consensus 175 iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~ 206 (291)
+++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 248 li~~a~l--~I~~-DSGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 248 LIALAKA--VVTN-DSGLMHVAAALNRPLVAL 276 (334)
T ss_pred HHHhCCE--EEee-CCHHHHHHHHcCCCEEEE
Confidence 8888887 8885 467788889999999975
No 149
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=70.88 E-value=15 Score=37.52 Aligned_cols=110 Identities=16% Similarity=0.093 Sum_probs=62.0
Q ss_pred EeeccCccc---ccCCCCcceEEec---CCc-hhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHH
Q 022811 166 IANWCPQDK---VLSHPSVSVFLTH---GGW-NSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDI 238 (291)
Q Consensus 166 v~~w~pq~~---iL~h~~v~~fItH---gG~-~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l 238 (291)
+.+++++.+ +++.+++ |+.- -|+ ..+.|++++|+|-.+.|+..+--.-+. ++.-|+.++ ..+.+++
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~----~l~~~llv~-P~d~~~l 418 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAA----ELAEALLVN-PNDIEGI 418 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhH----HhCcCeEEC-CCCHHHH
Confidence 446677664 7778888 5543 254 477999999776333332222111121 223377776 4678999
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 022811 239 AALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLH 288 (291)
Q Consensus 239 ~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~ 288 (291)
+++|.++++.+.. ..+++.+++.+.+++ -+...-.+++++.+.+
T Consensus 419 a~ai~~~l~~~~~-e~~~r~~~~~~~v~~-----~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 419 AAAIKRALEMPEE-EQRERMQAMQERLRR-----YDVHKWASDFLDELRE 462 (726)
T ss_pred HHHHHHHHcCCHH-HHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHH
Confidence 9999999986522 233333333333322 2445556666665543
No 150
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=70.56 E-value=15 Score=33.85 Aligned_cols=96 Identities=15% Similarity=0.206 Sum_probs=53.0
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccH-HHHH-HhcCCe-----EE----------e
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQ-EFYE-EIKDRG-----MI----------A 167 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~-~~~~-~~~~~~-----~v----------~ 167 (291)
.+++.+.||.+...+. -.+++.|++.++.++|+.+..... ...++. ++.- .++... .+ .
T Consensus 3 ~i~~~~GGTGGHi~Pa--la~a~~l~~~g~~v~~vg~~~~~e--~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 78 (352)
T PRK12446 3 KIVFTGGGSAGHVTPN--LAIIPYLKEDNWDISYIGSHQGIE--KTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMK 78 (352)
T ss_pred eEEEEcCCcHHHHHHH--HHHHHHHHhCCCEEEEEECCCccc--cccCcccCCcEEEEeccCcCCCchHHHHHHHHHHHH
Confidence 4788888888754443 346666777789999997543211 111111 0000 000000 00 0
Q ss_pred eccCcccccC--CCCcceEEecCCchh---HHHHHhcCCCeeec
Q 022811 168 NWCPQDKVLS--HPSVSVFLTHGGWNS---ILESVCGGVPIICW 206 (291)
Q Consensus 168 ~w~pq~~iL~--h~~v~~fItHgG~~S---~~Eal~~GvP~i~~ 206 (291)
.+.--..++. .|++ +|++||+-| ++.|...|+|+++.
T Consensus 79 ~~~~~~~i~~~~kPdv--vi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 79 GVMDAYVRIRKLKPDV--IFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHHHHHHHHHhcCCCE--EEecCchhhHHHHHHHHHcCCCEEEE
Confidence 0000011333 4565 999999997 89999999999874
No 151
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=68.00 E-value=36 Score=31.05 Aligned_cols=96 Identities=10% Similarity=0.066 Sum_probs=60.1
Q ss_pred CCceEEEEcCCc-c---cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcC----Ce-EEee--ccC
Q 022811 103 PNSVAYVNYGSI-T---VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKD----RG-MIAN--WCP 171 (291)
Q Consensus 103 ~~~vvyvs~GS~-~---~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~----~~-~v~~--w~p 171 (291)
+++.|.+..|+. . ..+.+.+.++++.|...+++++..-++. +....+.+.+..+. ++ .+.+ -+.
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~-----e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~ 253 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAK-----DHEAGNEILAALNTEQQAWCRNLAGETQLE 253 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHH-----hHHHHHHHHHhcccccccceeeccCCCCHH
Confidence 567888888874 2 5778899999999876677766543322 11122222222221 11 1222 133
Q ss_pred cc-cccCCCCcceEEecCCchhHHHHHhcCCCeeec
Q 022811 172 QD-KVLSHPSVSVFLTHGGWNSILESVCGGVPIICW 206 (291)
Q Consensus 172 q~-~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~ 206 (291)
+. .+++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 254 el~ali~~a~l--~I~n-DTGp~HlAaA~g~P~val 286 (348)
T PRK10916 254 QAVILIAACKA--IVTN-DSGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHHHHHhCCE--EEec-CChHHHHHHHhCCCEEEE
Confidence 33 38888887 8884 577888899999999875
No 152
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=67.18 E-value=23 Score=31.91 Aligned_cols=132 Identities=12% Similarity=0.004 Sum_probs=73.6
Q ss_pred CceEEEEcC-Ccc--cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEee--ccCcc-cccC
Q 022811 104 NSVAYVNYG-SIT--VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIAN--WCPQD-KVLS 177 (291)
Q Consensus 104 ~~vvyvs~G-S~~--~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--w~pq~-~iL~ 177 (291)
++.|.+..| |.. ..+.+.+.++++.|.+.++++++..+.. .+....+.+.+.. .++.+.+ .+.+. .+++
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~----~e~~~~~~i~~~~-~~~~l~g~~sL~elaali~ 252 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAE----HEEQRAKRLAEGF-PYVEVLPKLSLEQVARVLA 252 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCH----HHHHHHHHHHccC-CcceecCCCCHHHHHHHHH
Confidence 445544444 442 5788899999999987777766544432 1111222222211 2232322 23344 3888
Q ss_pred CCCcceEEecCCchhHHHHHhcCCCeeecccccchhH------HHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHc
Q 022811 178 HPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQT------NCRYASTTWGIGMEVNRDASREDIAALVKEIME 247 (291)
Q Consensus 178 h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~------na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~ 247 (291)
++++ ||+. ..|.++=|.+.|+|+|++=--.+... |...+ . -.+..+ ..++.+++-++++++|+
T Consensus 253 ~a~l--~I~n-DSGp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~-~--~~~~cm-~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 253 GAKA--VVSV-DTGLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHAC-R--SPGKSM-ADLSAETVFQKLETLIS 321 (322)
T ss_pred hCCE--EEec-CCcHHHHHHHhCCCEEEEECCCCcccccCCCCCceee-c--CCCccc-ccCCHHHHHHHHHHHhh
Confidence 9988 9986 46788899999999998611111111 11111 0 001111 26888888888888764
No 153
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=67.11 E-value=38 Score=30.98 Aligned_cols=98 Identities=12% Similarity=0.172 Sum_probs=61.1
Q ss_pred CCceEEEEcCCcc---cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhc-CCe-EEeec--cCcc-c
Q 022811 103 PNSVAYVNYGSIT---VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIK-DRG-MIANW--CPQD-K 174 (291)
Q Consensus 103 ~~~vvyvs~GS~~---~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~-~~~-~v~~w--~pq~-~ 174 (291)
+++.|.+..|+.. ..+.+.+.++++.|.+.++++++.-++... +......+.+... .++ -+.+- +.+. .
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~---e~~~~~~i~~~~~~~~~~~l~g~~sL~el~a 258 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKD---DLACVNEIAQGCQTPPVTALAGKTTFPELGA 258 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChH---HHHHHHHHHHhcCCCccccccCCCCHHHHHH
Confidence 3567888888763 567889999999998778887766443210 0011122222111 122 12222 3333 4
Q ss_pred ccCCCCcceEEecCCchhHHHHHhcCCCeeec
Q 022811 175 VLSHPSVSVFLTHGGWNSILESVCGGVPIICW 206 (291)
Q Consensus 175 iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~ 206 (291)
+++++++ ||+. -.|-++=|.+.|+|.|++
T Consensus 259 li~~a~l--~v~n-DSGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 259 LIDHAQL--FIGV-DSAPAHIAAAVNTPLICL 287 (352)
T ss_pred HHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 8888888 9986 467788889999999876
No 154
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=66.35 E-value=35 Score=33.05 Aligned_cols=57 Identities=11% Similarity=0.218 Sum_probs=39.1
Q ss_pred hHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHH---HHHHHHHHHHcCChHHHHHHHH
Q 022811 192 SILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASRE---DIAALVKEIMEGDKGKLIRQNV 258 (291)
Q Consensus 192 S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~---~l~~ai~~vl~~~~~~~~r~~a 258 (291)
++.||+++|+|+++.= +..=+..+ ...-.|..+++ +++ .+..++-++..|+ +++.++
T Consensus 381 v~IEAMa~glPvvAt~----~GGP~EiV-~~~~tG~l~dp--~~e~~~~~a~~~~kl~~~p---~l~~~~ 440 (495)
T KOG0853|consen 381 VPIEAMACGLPVVATN----NGGPAEIV-VHGVTGLLIDP--GQEAVAELADALLKLRRDP---ELWARM 440 (495)
T ss_pred eeHHHHhcCCCEEEec----CCCceEEE-EcCCcceeeCC--chHHHHHHHHHHHHHhcCH---HHHHHH
Confidence 6899999999999872 22223344 34345666654 444 6999999999998 555544
No 155
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.34 E-value=28 Score=31.60 Aligned_cols=85 Identities=16% Similarity=0.179 Sum_probs=49.3
Q ss_pred eccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHH--HHHHHHHhCcceeeCCCCCHHHHHHHHHHH
Q 022811 168 NWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTN--CRYASTTWGIGMEVNRDASREDIAALVKEI 245 (291)
Q Consensus 168 ~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~n--a~~v~~~~G~G~~l~~~~~~~~l~~ai~~v 245 (291)
.|-...++|.++++ .|--.|. .+-.++-.|||+|.+|-.+-|+.- |.+=..-+|+.+.+-+ -....-..+++++
T Consensus 301 sqqsfadiLH~ada--algmAGT-AtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~-~~aq~a~~~~q~l 376 (412)
T COG4370 301 SQQSFADILHAADA--ALGMAGT-ATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR-PEAQAAAQAVQEL 376 (412)
T ss_pred eHHHHHHHHHHHHH--HHHhccc-hHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC-CchhhHHHHHHHH
Confidence 34334445655555 3322221 233457789999999999999874 4443344577766643 2333344455559
Q ss_pred HcCChHHHHHHHHH
Q 022811 246 MEGDKGKLIRQNVQ 259 (291)
Q Consensus 246 l~~~~~~~~r~~a~ 259 (291)
+.|+ .+...++
T Consensus 377 l~dp---~r~~air 387 (412)
T COG4370 377 LGDP---QRLTAIR 387 (412)
T ss_pred hcCh---HHHHHHH
Confidence 9998 5544444
No 156
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=65.43 E-value=34 Score=28.68 Aligned_cols=76 Identities=9% Similarity=-0.056 Sum_probs=48.3
Q ss_pred eecccccchhHHHHHHHHHhCcceeeC----C---------CCCHHHHH----HHHHHHHcCChHHHHHHHHHHHHHHHH
Q 022811 204 ICWPFFAEQQTNCRYASTTWGIGMEVN----R---------DASREDIA----ALVKEIMEGDKGKLIRQNVQDWRKKAE 266 (291)
Q Consensus 204 i~~P~~~DQ~~na~~v~~~~G~G~~l~----~---------~~~~~~l~----~ai~~vl~~~~~~~~r~~a~~l~~~~~ 266 (291)
-+.|.+.||...-..+-|.+-+|+... + .++.+.++ +-|.++|.|+ .+=+|-+++.+.+.
T Consensus 21 WG~P~~dd~~LFE~L~Le~~QAGLSW~tIL~Kre~fr~aF~~Fd~~~VA~~~e~die~Ll~d~---~IIRnr~KI~Avi~ 97 (187)
T PRK10353 21 WGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDA---GIIRHRGKIQAIIG 97 (187)
T ss_pred CCCcCCCcHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCc---hhHHhHHHHHHHHH
Confidence 356789999998887768888888653 1 46666664 6677888887 44444444444443
Q ss_pred HH------HhcCCChHHHHHHH
Q 022811 267 AA------TDVGGASFNNFNKC 282 (291)
Q Consensus 267 ~a------~~~gg~s~~~~~~~ 282 (291)
+| .+++||-...+-.|
T Consensus 98 NA~~~l~i~~e~gSf~~ylW~f 119 (187)
T PRK10353 98 NARAYLQMEQNGEPFADFVWSF 119 (187)
T ss_pred HHHHHHHHHHhcCCHHHHHhhc
Confidence 33 23466665555554
No 157
>PLN02470 acetolactate synthase
Probab=65.02 E-value=32 Score=34.06 Aligned_cols=93 Identities=10% Similarity=0.064 Sum_probs=49.1
Q ss_pred EcCCcccCC--HHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeec--------cCcccccCCC
Q 022811 110 NYGSITVMT--DEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANW--------CPQDKVLSHP 179 (291)
Q Consensus 110 s~GS~~~~~--~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w--------~pq~~iL~h~ 179 (291)
+|||....+ ....+.+++.|++.|...++-+..... ..+-+.+.. .+++.++.- +-.-.-..+.
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~----~~l~dal~~--~~~i~~i~~rhE~~A~~~Adgyar~tg 75 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGAS----MEIHQALTR--SNCIRNVLCRHEQGEVFAAEGYAKASG 75 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCccc----HHHHHHHhc--cCCceEEEeccHHHHHHHHHHHHHHhC
Confidence 355554222 233566777777777777776654311 011122210 112322211 1111111233
Q ss_pred CcceEEecCCch------hHHHHHhcCCCeeeccc
Q 022811 180 SVSVFLTHGGWN------SILESVCGGVPIICWPF 208 (291)
Q Consensus 180 ~v~~fItHgG~~------S~~Eal~~GvP~i~~P~ 208 (291)
.++++++|.|-| .+.+|.+.++|||++.-
T Consensus 76 ~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~G 110 (585)
T PLN02470 76 KVGVCIATSGPGATNLVTGLADALLDSVPLVAITG 110 (585)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEec
Confidence 566688998854 78999999999999953
No 158
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=64.69 E-value=97 Score=27.65 Aligned_cols=91 Identities=19% Similarity=0.277 Sum_probs=55.0
Q ss_pred eEEEEcCCcc--cCCHHHHH----HHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcC-----CeEE-----eec
Q 022811 106 VAYVNYGSIT--VMTDEQMK----EFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKD-----RGMI-----ANW 169 (291)
Q Consensus 106 vvyvs~GS~~--~~~~~~~~----~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v-----~~w 169 (291)
|..+-.|+.. ....+... .+.+.+++.+.+|+...... -|+.....+.. .+.+ +++
T Consensus 164 vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRR--------Tp~~~~s~l~~~l~s~~~i~w~~~d~g~ 235 (329)
T COG3660 164 VAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRR--------TPDTVKSILKNNLNSSPGIVWNNEDTGY 235 (329)
T ss_pred EEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecC--------CcHHHHHHHHhccccCceeEeCCCCCCC
Confidence 4455566654 33344433 35556667888988877532 22322222222 2222 256
Q ss_pred cCcccccCCCCcceEEe-cCCchhHHHHHhcCCCeeec
Q 022811 170 CPQDKVLSHPSVSVFLT-HGGWNSILESVCGGVPIICW 206 (291)
Q Consensus 170 ~pq~~iL~h~~v~~fIt-HgG~~S~~Eal~~GvP~i~~ 206 (291)
=|..++|+.++- +|. --..|...||.+.|+|+-++
T Consensus 236 NPY~~~La~Ady--ii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 236 NPYIDMLAAADY--IISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred CchHHHHhhcce--EEEecchhhhhHHHhccCCCeEEE
Confidence 688899988876 554 45577789999999998663
No 159
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=64.48 E-value=4.2 Score=37.49 Aligned_cols=112 Identities=15% Similarity=0.084 Sum_probs=61.4
Q ss_pred cCCeEEe-eccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHH---HHhCcceeeCCCCCHH
Q 022811 161 KDRGMIA-NWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYAS---TTWGIGMEVNRDASRE 236 (291)
Q Consensus 161 ~~~~~v~-~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~---~~~G~G~~l~~~~~~~ 236 (291)
.+++... +..+-.++|..+++ .||-- .+.+.|.++.++|+|....-.|.+...+-+. +....|..+ -+.+
T Consensus 251 ~~~i~~~~~~~~~~~ll~~aDi--LITDy-SSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~---~~~~ 324 (369)
T PF04464_consen 251 NSNIIFVSDNEDIYDLLAAADI--LITDY-SSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIV---YNFE 324 (369)
T ss_dssp TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EE---SSHH
T ss_pred CCcEEECCCCCCHHHHHHhcCE--EEEec-hhHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCcee---CCHH
Confidence 3566543 44456679999998 99987 4478999999999998877666553221100 112223332 4789
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 022811 237 DIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKC 282 (291)
Q Consensus 237 ~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~ 282 (291)
+|.++|..++.+. ..++++.++..+.+-. -.+|.+.+.+.+.
T Consensus 325 eL~~~i~~~~~~~--~~~~~~~~~~~~~~~~--~~Dg~s~eri~~~ 366 (369)
T PF04464_consen 325 ELIEAIENIIENP--DEYKEKREKFRDKFFK--YNDGNSSERIVNY 366 (369)
T ss_dssp HHHHHHTTHHHHH--HHTHHHHHHHHHHHST--T--S-HHHHHHHH
T ss_pred HHHHHHHhhhhCC--HHHHHHHHHHHHHhCC--CCCchHHHHHHHH
Confidence 9999999988644 2455555555555543 2244444434333
No 160
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=61.36 E-value=1.2e+02 Score=27.99 Aligned_cols=135 Identities=10% Similarity=0.092 Sum_probs=82.1
Q ss_pred CceEEEEcCCcccCCHHHHHHHHHHHH---hCCCCEEEEEcCCCCCCccccccHHHHH----Hhc-CCeEE-eeccCcc-
Q 022811 104 NSVAYVNYGSITVMTDEQMKEFAWGLA---NSGHPFLWIVRPDMVTGDSAILSQEFYE----EIK-DRGMI-ANWCPQD- 173 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~~l~---~~~~~~lw~~~~~~~~~~~~~~~~~~~~----~~~-~~~~v-~~w~pq~- 173 (291)
++-+.|-.|..+..+...++.+ ++|. ..+.+++.-++-+.. .+...+...+ ..+ +++.+ .+++|-.
T Consensus 183 ~~~ltILvGNSgd~sNnHieaL-~~L~~~~~~~~kIivPLsYg~~---n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~e 258 (360)
T PF07429_consen 183 KGKLTILVGNSGDPSNNHIEAL-EALKQQFGDDVKIIVPLSYGAN---NQAYIQQVIQAGKELFGAENFQILTEFMPFDE 258 (360)
T ss_pred CCceEEEEcCCCCCCccHHHHH-HHHHHhcCCCeEEEEECCCCCc---hHHHHHHHHHHHHHhcCccceeEhhhhCCHHH
Confidence 3457777888876666554433 2232 234566655543210 0111111111 123 46654 5777754
Q ss_pred --cccCCCCcceEEec--CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHc
Q 022811 174 --KVLSHPSVSVFLTH--GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIME 247 (291)
Q Consensus 174 --~iL~h~~v~~fItH--gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~ 247 (291)
.+|+.++++.|.+. =|.|++.-.++.|+|++.-- +-+. -..+ .+.|+-+.... .++...+.++=+++..
T Consensus 259 Yl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~---~np~-~~~l-~~~~ipVlf~~d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 259 YLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSR---DNPF-WQDL-KEQGIPVLFYGDELDEALVREAQRQLAN 332 (360)
T ss_pred HHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEec---CChH-HHHH-HhCCCeEEeccccCCHHHHHHHHHHHhh
Confidence 59999999777664 58999999999999998752 2222 3334 33477666553 7899999999988875
No 161
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=59.92 E-value=50 Score=30.07 Aligned_cols=95 Identities=16% Similarity=0.150 Sum_probs=60.9
Q ss_pred CceEEEEcC-Ccc---cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEee--ccCcc-ccc
Q 022811 104 NSVAYVNYG-SIT---VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIAN--WCPQD-KVL 176 (291)
Q Consensus 104 ~~vvyvs~G-S~~---~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--w~pq~-~iL 176 (291)
++.|.++.| |.. ..+.+.+.++++.+.+.++++++.-+.. +....+.+.+..+....+.+ -+.|. .++
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~-----e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li 249 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPD-----EEERAEEIAKGLPNAVILAGKTSLEELAALI 249 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChH-----HHHHHHHHHHhcCCccccCCCCCHHHHHHHH
Confidence 578999988 442 5788999999999999886655544321 11222333333332222332 23344 377
Q ss_pred CCCCcceEEecCCchhHHHHHhcCCCeeec
Q 022811 177 SHPSVSVFLTHGGWNSILESVCGGVPIICW 206 (291)
Q Consensus 177 ~h~~v~~fItHgG~~S~~Eal~~GvP~i~~ 206 (291)
.++++ ||+. -.|-++=|.+.|+|.|++
T Consensus 250 ~~a~l--~I~~-DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 250 AGADL--VIGN-DSGPMHLAAALGTPTIAL 276 (334)
T ss_pred hcCCE--EEcc-CChHHHHHHHcCCCEEEE
Confidence 78887 7764 567788888999999986
No 162
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=59.24 E-value=1.8e+02 Score=28.29 Aligned_cols=109 Identities=10% Similarity=0.065 Sum_probs=67.5
Q ss_pred EEeeccCccc---ccCCCCcceEEe--cCCchhH-HHHHhcCC----CeeecccccchhHHHHHHHHHhCcceeeCCCCC
Q 022811 165 MIANWCPQDK---VLSHPSVSVFLT--HGGWNSI-LESVCGGV----PIICWPFFAEQQTNCRYASTTWGIGMEVNRDAS 234 (291)
Q Consensus 165 ~v~~w~pq~~---iL~h~~v~~fIt--HgG~~S~-~Eal~~Gv----P~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 234 (291)
++.+.+|..+ +++.+++ ++|| .-|+|-+ .|.++++. |+|.=-+. -|. +.+.-++.++ ..+
T Consensus 365 ~~~~~v~~~el~alYr~ADV-~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefa-----Gaa---~~l~~AllVN-P~d 434 (487)
T TIGR02398 365 FFTRSLPYEEVSAWFAMADV-MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFA-----GAA---VELKGALLTN-PYD 434 (487)
T ss_pred EEcCCCCHHHHHHHHHhCCE-EEECccccccCcchhhHHhhhcCCCCCEEEeccc-----cch---hhcCCCEEEC-CCC
Confidence 3456777665 6778888 2333 3488855 59999877 54443321 121 3345577776 578
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 022811 235 REDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHY 289 (291)
Q Consensus 235 ~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 289 (291)
.++++++|.++|+.+.. +-++|.+++.+.++.. +...=.+.|++.|...
T Consensus 435 ~~~~A~ai~~AL~m~~~-Er~~R~~~l~~~v~~~-----d~~~W~~~fl~~l~~~ 483 (487)
T TIGR02398 435 PVRMDETIYVALAMPKA-EQQARMREMFDAVNYY-----DVQRWADEFLAAVSPQ 483 (487)
T ss_pred HHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHhhC-----CHHHHHHHHHHHhhhc
Confidence 99999999999997733 3345555555555442 4444467777777643
No 163
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=57.72 E-value=12 Score=30.70 Aligned_cols=33 Identities=18% Similarity=0.441 Sum_probs=22.6
Q ss_pred CCCCcceEEecCCchhHHHHHhcCCCeeeccccc
Q 022811 177 SHPSVSVFLTHGGWNSILESVCGGVPIICWPFFA 210 (291)
Q Consensus 177 ~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~ 210 (291)
.+..+..+|++||...+..... ++|+|-+|..+
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 4455556999999999999988 99999999853
No 164
>PRK15062 hydrogenase isoenzymes formation protein HypD; Provisional
Probab=53.21 E-value=52 Score=30.47 Aligned_cols=26 Identities=19% Similarity=0.245 Sum_probs=16.7
Q ss_pred HHhCcceeeCCCCCHHHHHHHHHHHHc
Q 022811 221 TTWGIGMEVNRDASREDIAALVKEIME 247 (291)
Q Consensus 221 ~~~G~G~~l~~~~~~~~l~~ai~~vl~ 247 (291)
++.|+-..+. .+++.+|-.+|..++.
T Consensus 209 ~~y~~P~VVa-GFEp~DiL~ai~~lv~ 234 (364)
T PRK15062 209 EEYGIPVVVA-GFEPLDILQSILMLVR 234 (364)
T ss_pred HHcCCCeEEe-ccCHHHHHHHHHHHHH
Confidence 5667766665 4667776666666653
No 165
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=53.14 E-value=30 Score=28.20 Aligned_cols=35 Identities=17% Similarity=0.034 Sum_probs=26.3
Q ss_pred eEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEE
Q 022811 106 VAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIV 140 (291)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~ 140 (291)
.+|+++||.......+++..+.+|.+.+..-++.+
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~ 37 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVAV 37 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 69999999987677778888888887664334443
No 166
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=50.33 E-value=2.2e+02 Score=26.60 Aligned_cols=143 Identities=15% Similarity=0.250 Sum_probs=83.5
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHh---------CCC-CEEEEEcCCCCCCccccccHHHHHHhc----CCeEE-e
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLAN---------SGH-PFLWIVRPDMVTGDSAILSQEFYEEIK----DRGMI-A 167 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~---------~~~-~~lw~~~~~~~~~~~~~~~~~~~~~~~----~~~~v-~ 167 (291)
+++.++||--| ..+.+.+..+++||.. .++ .++.++.+.. .+-+.+...+. .++.+ +
T Consensus 253 ~~pallvsSTs--wTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKG------PlkE~Y~~~I~~~~~~~v~~~t 324 (444)
T KOG2941|consen 253 ERPALLVSSTS--WTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKG------PLKEKYSQEIHEKNLQHVQVCT 324 (444)
T ss_pred CCCeEEEecCC--CCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCC------chhHHHHHHHHHhcccceeeee
Confidence 56778887333 2345667777777762 122 4455554321 23333333322 34443 5
Q ss_pred eccC---cccccCCCCcceEEecCCch-----hHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHH
Q 022811 168 NWCP---QDKVLSHPSVSVFLTHGGWN-----SILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIA 239 (291)
Q Consensus 168 ~w~p---q~~iL~h~~v~~fItHgG~~-----S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~ 239 (291)
.|.. ...+|+.+++|..+|-...| -+..-.-+|+|++.+-+ ..--..+ +.-.-|.... +.+++.
T Consensus 325 pWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~f----kcl~ELV-kh~eNGlvF~---Ds~eLa 396 (444)
T KOG2941|consen 325 PWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNF----KCLDELV-KHGENGLVFE---DSEELA 396 (444)
T ss_pred cccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecc----hhHHHHH-hcCCCceEec---cHHHHH
Confidence 7864 33489999998888766554 46677788888887754 1122233 4434555554 789999
Q ss_pred HHHHHHHcC---ChH--HHHHHHHHHH
Q 022811 240 ALVKEIMEG---DKG--KLIRQNVQDW 261 (291)
Q Consensus 240 ~ai~~vl~~---~~~--~~~r~~a~~l 261 (291)
+.+..++.| +.+ +++++|+++-
T Consensus 397 ~ql~~lf~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 397 EQLQMLFKNFPDNADELNQLKKNLREE 423 (444)
T ss_pred HHHHHHHhcCCCCHHHHHHHHHhhHHH
Confidence 999888872 212 4566666654
No 167
>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=49.76 E-value=2e+02 Score=26.03 Aligned_cols=153 Identities=15% Similarity=0.222 Sum_probs=78.6
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHH----------HHhcCCeEEeeccCccc---ccCCCCcceE
Q 022811 118 TDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFY----------EEIKDRGMIANWCPQDK---VLSHPSVSVF 184 (291)
Q Consensus 118 ~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~----------~~~~~~~~v~~w~pq~~---iL~h~~v~~f 184 (291)
....+...++-+++.+.+++..+....... .+.+.+. .+.+=++.+.+|+||.+ +|--+++. +
T Consensus 187 ~npa~~s~ieq~r~a~~p~llL~~e~~~~~---~~~~~~~~~~~a~Gdv~~~~~lrvvklPFvpqddyd~LL~lcD~n-~ 262 (370)
T COG4394 187 ENPALPSWIEQLRKADKPILLLIPEGKTQA---NFAKYFDNNNNADGDVFQTAKLRVVKLPFVPQDDYDELLWLCDFN-L 262 (370)
T ss_pred CCcchHHHHHHHHhcCCCEEEEcccchHHH---HHHHHcCCCcccccchhcccceEEEEecCCcHhHHHHHHHhcccc-e
Confidence 334555666677777777777665331110 0111110 00112344568999986 78778772 2
Q ss_pred EecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC--CCCHHHHHHHHHHHHc----CC---hH----
Q 022811 185 LTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR--DASREDIAALVKEIME----GD---KG---- 251 (291)
Q Consensus 185 ItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~--~~~~~~l~~ai~~vl~----~~---~~---- 251 (291)
| =|--|...|..+|+|.+=- .+-|..|+... ++-+ -+++ ..-+.+..+++++... ++ +-
T Consensus 263 V--RGEDSFVRAq~agkPflWH--IYpQdentHl~--KLea--Fldky~~~lp~~~a~alrt~~~~~N~~~ls~~w~~f~ 334 (370)
T COG4394 263 V--RGEDSFVRAQLAGKPFLWH--IYPQDENTHLA--KLEA--FLDKYCPFLPPNTAKALRTFWIAWNAGRLSDDWSYFF 334 (370)
T ss_pred e--ecchHHHHHHHcCCCcEEE--ecCCccccHHH--HHHH--HHHHhCCCCCHHHHHHHHHHHHHhcCCcccccHHHHH
Confidence 3 3678999999999998742 23344454321 1110 1111 1122333444444421 11 01
Q ss_pred ---HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 022811 252 ---KLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEV 286 (291)
Q Consensus 252 ---~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l 286 (291)
...|+.|++.+..+-. .++-.+++..|++..
T Consensus 335 ~~~~~~r~~a~~wa~~l~~----~~dlaekLvaF~ek~ 368 (370)
T COG4394 335 KNLKEWREHAKKWANHLIK----NPDLAEKLVAFIEKI 368 (370)
T ss_pred HhhHHHHHHHHHHHHHHcc----CccHHHHHHHHHHHh
Confidence 2456666666655533 456677777777764
No 168
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=48.99 E-value=1.1e+02 Score=28.30 Aligned_cols=100 Identities=13% Similarity=0.160 Sum_probs=64.5
Q ss_pred EeeccCccccc-CCCCcceEEecC---Cch-hHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHH
Q 022811 166 IANWCPQDKVL-SHPSVSVFLTHG---GWN-SILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAA 240 (291)
Q Consensus 166 v~~w~pq~~iL-~h~~v~~fItHg---G~~-S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ 240 (291)
+.+-.+-...| .|.++ +|+|= |.| .-.|+++.|-|+| .|+..+ . ++|..-. .++..+=.+
T Consensus 257 fegR~~~p~fla~~tD~--VvSHqWeN~lNYlY~daLyggYPLV---------HNS~~l-~--d~GYYY~-~fD~~~G~r 321 (364)
T PF10933_consen 257 FEGRFDFPDFLAQHTDA--VVSHQWENPLNYLYYDALYGGYPLV---------HNSPLL-K--DVGYYYP-DFDAFEGAR 321 (364)
T ss_pred EeeecChHHHHHhCCCE--EEeccccchhhHHHHHHHhcCCCcc---------cCcchh-c--ccCcCCC-CccHHHHHH
Confidence 34434434433 35565 99994 344 4589999999997 688877 3 4788765 567777677
Q ss_pred HHHHHHc--CChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 022811 241 LVKEIME--GDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEV 286 (291)
Q Consensus 241 ai~~vl~--~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l 286 (291)
++.+++. |.+-+.|+++++++=..+. -..-.|++...+.|
T Consensus 322 ~L~~A~~~HD~~~~~Y~~ra~~~l~~~~------p~n~~nv~~y~~~L 363 (364)
T PF10933_consen 322 QLLRAIREHDADLDAYRARARRLLDRLS------PENPANVRAYEARL 363 (364)
T ss_pred HHHHHHHHccccHHHHHHHHHHHHHhhC------CCCHHHHHHHHHhh
Confidence 7777765 4445789999988755542 23345566555544
No 169
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=48.02 E-value=55 Score=25.74 Aligned_cols=38 Identities=13% Similarity=0.184 Sum_probs=30.2
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEc
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVR 141 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~ 141 (291)
...+|++++||......+.++++++.+. .+.+++++..
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~ 87 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNP 87 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEEC
Confidence 4579999999998778888999998884 3577777654
No 170
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=46.67 E-value=42 Score=31.30 Aligned_cols=90 Identities=17% Similarity=0.211 Sum_probs=57.0
Q ss_pred cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcc-ccccH-HHH---HHhcCCeE--EeeccCccc---ccCCCCcceEE
Q 022811 116 VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDS-AILSQ-EFY---EEIKDRGM--IANWCPQDK---VLSHPSVSVFL 185 (291)
Q Consensus 116 ~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~-~~~~~-~~~---~~~~~~~~--v~~w~pq~~---iL~h~~v~~fI 185 (291)
......+..+++++...+.++...+..+...... ..+.. ... ....+++. +.+|+||.+ +|-.+++ .||
T Consensus 191 ~Ye~~~l~~ll~~~~~~~~pv~llvp~g~~~~~~~~~~~~~~~~~g~~~~~g~l~l~~lPF~~Q~~yD~LLw~cD~-NfV 269 (374)
T PF10093_consen 191 CYENAALASLLDAWAASPKPVHLLVPEGRALNSLAAWLGDALLQAGDSWQRGNLTLHVLPFVPQDDYDRLLWACDF-NFV 269 (374)
T ss_pred eCCchHHHHHHHHHhcCCCCeEEEecCCccHHHHHHHhccccccCccccccCCeEEEECCCCCHHHHHHHHHhCcc-ceE
Confidence 3456678999999998888887777654221100 00110 000 00124443 569999986 8888887 344
Q ss_pred ecCCchhHHHHHhcCCCeeeccc
Q 022811 186 THGGWNSILESVCGGVPIICWPF 208 (291)
Q Consensus 186 tHgG~~S~~Eal~~GvP~i~~P~ 208 (291)
- |==|...|..+|+|+|==.+
T Consensus 270 R--GEDSfVRAqwAgkPFvWhIY 290 (374)
T PF10093_consen 270 R--GEDSFVRAQWAGKPFVWHIY 290 (374)
T ss_pred e--cchHHHHHHHhCCCceEecC
Confidence 3 67899999999999985433
No 171
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=44.84 E-value=65 Score=26.06 Aligned_cols=27 Identities=19% Similarity=0.262 Sum_probs=21.7
Q ss_pred ceEEecCCc------hhHHHHHhcCCCeeeccc
Q 022811 182 SVFLTHGGW------NSILESVCGGVPIICWPF 208 (291)
Q Consensus 182 ~~fItHgG~------~S~~Eal~~GvP~i~~P~ 208 (291)
+++++|+|- +.+.+|...++|||++.-
T Consensus 65 ~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~g 97 (164)
T cd07039 65 GVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIAG 97 (164)
T ss_pred EEEEECCCCcHHHHHHHHHHHHhcCCCEEEEec
Confidence 347888774 478899999999999963
No 172
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=44.67 E-value=44 Score=25.86 Aligned_cols=37 Identities=8% Similarity=0.241 Sum_probs=27.4
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHHh--CCCCEEEEEc
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLAN--SGHPFLWIVR 141 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~~--~~~~~lw~~~ 141 (291)
.+++++|||......+.+..+.+.+.+ .++.+-|.+-
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 589999999986555678888888854 3457777654
No 173
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=44.05 E-value=31 Score=30.55 Aligned_cols=39 Identities=5% Similarity=0.094 Sum_probs=24.6
Q ss_pred ceEEEEcCCcccCCH-HHHHHHHHHHHh--CCCCEEEEEcCC
Q 022811 105 SVAYVNYGSITVMTD-EQMKEFAWGLAN--SGHPFLWIVRPD 143 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~-~~~~~i~~~l~~--~~~~~lw~~~~~ 143 (291)
.++++||||...-.. ..+..+.+.+++ .++.+-|++.+.
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS~ 43 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTSR 43 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-H
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchHH
Confidence 489999999875443 377777777765 578999998643
No 174
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=40.40 E-value=1.1e+02 Score=24.97 Aligned_cols=76 Identities=13% Similarity=0.223 Sum_probs=49.2
Q ss_pred HHHHHHhhhc--CccEEEEcCcccccHHHHHHHHhcCCCeEEEccccccCCCCCccccccccCCCCCCChhhHhhhccCC
Q 022811 25 YMKTEVQNCL--ESSAIIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKE 102 (291)
Q Consensus 25 ~~~~~~~~~~--~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~ 102 (291)
++...++... .....|+-+.++.-......++...|++..+|--...... .+++++.+.+....
T Consensus 36 l~~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~--------------~~~~~i~~~I~~~~ 101 (172)
T PF03808_consen 36 LFPDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDE--------------EEEEAIINRINASG 101 (172)
T ss_pred HHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCh--------------hhHHHHHHHHHHcC
Confidence 4444444332 3468888887766556667888888999988865543211 13456777777653
Q ss_pred CCceEEEEcCCcc
Q 022811 103 PNSVAYVNYGSIT 115 (291)
Q Consensus 103 ~~~vvyvs~GS~~ 115 (291)
..+|+|++|+--
T Consensus 102 -pdiv~vglG~Pk 113 (172)
T PF03808_consen 102 -PDIVFVGLGAPK 113 (172)
T ss_pred -CCEEEEECCCCH
Confidence 469999999864
No 175
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=40.16 E-value=1.8e+02 Score=24.45 Aligned_cols=142 Identities=11% Similarity=0.066 Sum_probs=67.4
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhc-CCeEEeeccCcccccCCCCc
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIK-DRGMIANWCPQDKVLSHPSV 181 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~w~pq~~iL~h~~v 181 (291)
.+.++.|..|.++ ...+..|.+.+..+.++ .+. +.+.+....+ ..+.......+..-+..+++
T Consensus 10 ~k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VI-s~~--------~~~~l~~l~~~~~i~~~~~~~~~~~l~~adl 73 (202)
T PRK06718 10 NKRVVIVGGGKVA-------GRRAITLLKYGAHIVVI-SPE--------LTENLVKLVEEGKIRWKQKEFEPSDIVDAFL 73 (202)
T ss_pred CCEEEEECCCHHH-------HHHHHHHHHCCCeEEEE-cCC--------CCHHHHHHHhCCCEEEEecCCChhhcCCceE
Confidence 4567777766665 34455566667766554 322 1222222222 23444333334445666676
Q ss_pred ceEEecCCchhHHHHHh----cCCCeeecccccchhHHHH-----HHHHHhCcceeeCC-C---CCHHHHHHHHHHHHcC
Q 022811 182 SVFLTHGGWNSILESVC----GGVPIICWPFFAEQQTNCR-----YASTTWGIGMEVNR-D---ASREDIAALVKEIMEG 248 (291)
Q Consensus 182 ~~fItHgG~~S~~Eal~----~GvP~i~~P~~~DQ~~na~-----~v~~~~G~G~~l~~-~---~~~~~l~~ai~~vl~~ 248 (291)
+|+--+.-.+.+.++ .++++-+ .|.+..+. .+ +.-++-+.+.. . .-+..|++.|..++ .
T Consensus 74 --ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~-~~g~l~iaIsT~G~sP~la~~lr~~ie~~~-~ 145 (202)
T PRK06718 74 --VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSAL-HRGKLTISVSTDGASPKLAKKIRDELEALY-D 145 (202)
T ss_pred --EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEE-EcCCeEEEEECCCCChHHHHHHHHHHHHHc-c
Confidence 777767666655554 3444333 34333221 22 22123333322 1 12344555555544 2
Q ss_pred ChHHHHHHHHHHHHHHHHHH
Q 022811 249 DKGKLIRQNVQDWRKKAEAA 268 (291)
Q Consensus 249 ~~~~~~r~~a~~l~~~~~~a 268 (291)
++...+-+.+.+++..+++.
T Consensus 146 ~~~~~~~~~~~~~R~~~k~~ 165 (202)
T PRK06718 146 ESYESYIDFLYECRQKIKEL 165 (202)
T ss_pred hhHHHHHHHHHHHHHHHHHh
Confidence 32345666666666666553
No 176
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=39.96 E-value=20 Score=28.29 Aligned_cols=39 Identities=18% Similarity=0.223 Sum_probs=28.8
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHH-----hCCCCEEEEEcCC
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLA-----NSGHPFLWIVRPD 143 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~-----~~~~~~lw~~~~~ 143 (291)
.+|+|+.|+........+..++.... .....|+|+++..
T Consensus 3 ~vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~ 46 (156)
T PF08030_consen 3 NVVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDA 46 (156)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-T
T ss_pred EEEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCch
Confidence 58999999998666677777777766 2336899999965
No 177
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=39.91 E-value=64 Score=28.55 Aligned_cols=51 Identities=16% Similarity=0.204 Sum_probs=35.4
Q ss_pred eEEecCCchhHHHHHh------cCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 183 VFLTHGGWNSILESVC------GGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 183 ~fItHgG~~S~~Eal~------~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
++|+-||-||++.++. .++|++++... .+|-.- .++.+++.+++.++++++
T Consensus 38 lvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~G--------------~lGFL~--~~~~~~~~~~l~~i~~g~ 94 (265)
T PRK04885 38 IVISVGGDGTLLSAFHRYENQLDKVRFVGVHTG--------------HLGFYT--DWRPFEVDKLVIALAKDP 94 (265)
T ss_pred EEEEECCcHHHHHHHHHhcccCCCCeEEEEeCC--------------Cceecc--cCCHHHHHHHHHHHHcCC
Confidence 3999999999999975 47888887530 122221 456777778888877654
No 178
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=39.85 E-value=71 Score=25.83 Aligned_cols=98 Identities=16% Similarity=0.165 Sum_probs=51.9
Q ss_pred hhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeec-cC
Q 022811 93 ECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANW-CP 171 (291)
Q Consensus 93 ~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w-~p 171 (291)
++-+||.+. ....++.|..+ .+....++..+.+-.++=++..... .... ........++ .+
T Consensus 22 ~lg~~La~~---g~~lv~Gg~~G-----lM~a~a~ga~~~gg~viGVlp~~l~------~~~~----~~~~~i~~~~~~~ 83 (159)
T TIGR00725 22 RLGKELAKK---GHILINGGRTG-----VMEAVSKGAREAGGLVVGILPDEDF------AGNP----YLTIKVKTGMNFA 83 (159)
T ss_pred HHHHHHHHC---CCEEEcCCchh-----HHHHHHHHHHHCCCeEEEECChhhc------cCCC----CceEEEECCCcch
Confidence 456677654 34566644433 4555666666666666555432210 0000 0011122343 44
Q ss_pred cccccCCCCcceEEecCCchhHHH---HHhcCCCeeeccc
Q 022811 172 QDKVLSHPSVSVFLTHGGWNSILE---SVCGGVPIICWPF 208 (291)
Q Consensus 172 q~~iL~h~~v~~fItHgG~~S~~E---al~~GvP~i~~P~ 208 (291)
...++...+-..++--||.||+.| ++.+++|+++++.
T Consensus 84 Rk~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 84 RNFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred HHHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 444443333334566788888755 5789999999885
No 179
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=39.59 E-value=65 Score=25.98 Aligned_cols=28 Identities=21% Similarity=0.239 Sum_probs=21.1
Q ss_pred cceEEecCCc------hhHHHHHhcCCCeeeccc
Q 022811 181 VSVFLTHGGW------NSILESVCGGVPIICWPF 208 (291)
Q Consensus 181 v~~fItHgG~------~S~~Eal~~GvP~i~~P~ 208 (291)
.+++++|.|- +.+.+|...++|||++.-
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 3346777664 467899999999999964
No 180
>TIGR00075 hypD hydrogenase expression/formation protein HypD. HypD is involved in the hyp operon which is needed for the activity of the three hydrogenase isoenzymes in Escherichia coli. HypD is one of the genes needed for formation of these enzymes. This protein has been found in gram-negative and gram-positive bacteria and Archaea.
Probab=39.35 E-value=1.2e+02 Score=28.27 Aligned_cols=26 Identities=12% Similarity=0.206 Sum_probs=16.7
Q ss_pred HHhCcceeeCCCCCHHHHHHHHHHHHc
Q 022811 221 TTWGIGMEVNRDASREDIAALVKEIME 247 (291)
Q Consensus 221 ~~~G~G~~l~~~~~~~~l~~ai~~vl~ 247 (291)
++.++-..+. .+.+.+|-.+|..++.
T Consensus 215 ~~y~~P~VVa-GFEp~DiL~~i~~ll~ 240 (369)
T TIGR00075 215 EKYKIPIVIA-GFEPVDILQAIYMLLK 240 (369)
T ss_pred HHcCCCeEEe-ccCHHHHHHHHHHHHH
Confidence 5667666665 4677777666666653
No 181
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=39.10 E-value=1.2e+02 Score=24.68 Aligned_cols=97 Identities=15% Similarity=0.153 Sum_probs=54.8
Q ss_pred HHHHHHhhhc--CccEEEEcCcccccHHHHHHHHhcCCCeEEEccccccCCCCCccccccccCCCCCCChhhHhhhccCC
Q 022811 25 YMKTEVQNCL--ESSAIIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKE 102 (291)
Q Consensus 25 ~~~~~~~~~~--~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~ 102 (291)
++.+.++... .....|+=+-++--....+.++...|++..+|-....... .++.++.+.+....
T Consensus 34 l~~~ll~~~~~~~~~v~llG~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~--------------~~~~~i~~~I~~~~ 99 (171)
T cd06533 34 LMPALLELAAQKGLRVFLLGAKPEVLEKAAERLRARYPGLKIVGYHHGYFGP--------------EEEEEIIERINASG 99 (171)
T ss_pred HHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCcEEEEecCCCCCh--------------hhHHHHHHHHHHcC
Confidence 4444444443 3567777776655555556678888999988854432211 12334666676653
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEc
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVR 141 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~ 141 (291)
..+|+|++|+--+ ...+..... ..+..++..++
T Consensus 100 -pdiv~vglG~PkQ--E~~~~~~~~---~l~~~v~~~vG 132 (171)
T cd06533 100 -ADILFVGLGAPKQ--ELWIARHKD---RLPVPVAIGVG 132 (171)
T ss_pred -CCEEEEECCCCHH--HHHHHHHHH---HCCCCEEEEec
Confidence 4599999998642 222333332 23455555555
No 182
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=38.80 E-value=1.5e+02 Score=27.25 Aligned_cols=113 Identities=11% Similarity=0.103 Sum_probs=62.8
Q ss_pred HHHHHHHhC--CCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcceEEe------cCCchhHHH
Q 022811 124 EFAWGLANS--GHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVFLT------HGGWNSILE 195 (291)
Q Consensus 124 ~i~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~fIt------HgG~~S~~E 195 (291)
..+.++... +..++.++..+. .-...+.++.. + ..|-.-.+++...++.++.+ +-+.--+.+
T Consensus 16 ~h~~al~~~~~~~eLvaV~d~~~------erA~~~A~~~g--i--~~y~~~eell~d~Di~~V~ipt~~P~~~H~e~a~~ 85 (343)
T TIGR01761 16 FYLAAFAAAPERFELAGILAQGS------ERSRALAHRLG--V--PLYCEVEELPDDIDIACVVVRSAIVGGQGSALARA 85 (343)
T ss_pred HHHHHHHhCCCCcEEEEEEcCCH------HHHHHHHHHhC--C--CccCCHHHHhcCCCEEEEEeCCCCCCccHHHHHHH
Confidence 345555554 367777665431 11122322222 1 13445566777788877764 234567788
Q ss_pred HHhcCCCeee-cccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 196 SVCGGVPIIC-WPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 196 al~~GvP~i~-~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
++.+|+.++| -|+..++-.-...++++.|+=..+. .+.+ ...++++++.+.
T Consensus 86 aL~aGkHVL~EKPla~~Ea~el~~~A~~~g~~l~v~-~f~p--~~~~vr~~i~~~ 137 (343)
T TIGR01761 86 LLARGIHVLQEHPLHPRDIQDLLRLAERQGRRYLVN-TFYP--HLPAVRRFIEYA 137 (343)
T ss_pred HHhCCCeEEEcCCCCHHHHHHHHHHHHHcCCEEEEE-ecCH--HHHHHHHHHHcc
Confidence 9999999999 8987555554444445545444443 2322 345555666433
No 183
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=38.68 E-value=77 Score=31.14 Aligned_cols=27 Identities=19% Similarity=0.464 Sum_probs=21.7
Q ss_pred cceEEecCCch------hHHHHHhcCCCeeecc
Q 022811 181 VSVFLTHGGWN------SILESVCGGVPIICWP 207 (291)
Q Consensus 181 v~~fItHgG~~------S~~Eal~~GvP~i~~P 207 (291)
.+++++|.|-| .+.+|...++|+|++-
T Consensus 77 ~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 77 PAVCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CeEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 34478887744 7899999999999985
No 184
>PLN02929 NADH kinase
Probab=36.51 E-value=65 Score=29.15 Aligned_cols=66 Identities=15% Similarity=0.253 Sum_probs=43.7
Q ss_pred CCCcceEEecCCchhHHHHHh---cCCCeeeccccc------chhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcC
Q 022811 178 HPSVSVFLTHGGWNSILESVC---GGVPIICWPFFA------EQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEG 248 (291)
Q Consensus 178 h~~v~~fItHgG~~S~~Eal~---~GvP~i~~P~~~------DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 248 (291)
.+++ +|+-||-||++.+.. .++|++++-... .+++|..- +..-+|..- .++.+++.+++.+++++
T Consensus 64 ~~Dl--vi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~--~~r~lGfL~--~~~~~~~~~~L~~il~g 137 (301)
T PLN02929 64 DVDL--VVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFD--ARRSTGHLC--AATAEDFEQVLDDVLFG 137 (301)
T ss_pred CCCE--EEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccc--cccCccccc--cCCHHHHHHHHHHHHcC
Confidence 3455 999999999999843 468998886532 23333311 111244443 46789999999999976
Q ss_pred C
Q 022811 249 D 249 (291)
Q Consensus 249 ~ 249 (291)
+
T Consensus 138 ~ 138 (301)
T PLN02929 138 R 138 (301)
T ss_pred C
Confidence 4
No 185
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=36.41 E-value=2.9e+02 Score=24.34 Aligned_cols=98 Identities=10% Similarity=0.244 Sum_probs=50.4
Q ss_pred CceEEEEcCCcccCCHHHHHHHHH---HHHh-CCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEee-ccCcc--ccc
Q 022811 104 NSVAYVNYGSITVMTDEQMKEFAW---GLAN-SGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIAN-WCPQD--KVL 176 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~---~l~~-~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-w~pq~--~iL 176 (291)
++.|.|+.........+..+.+++ .+.+ .++++++.--.. ..+......+...++++..+.. .-|+. .++
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~---~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i 248 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQ---PQDLPLARALRDQLLGPAEVLSPLDPEELLGLF 248 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCc---chhHHHHHHHHHhcCCCcEEEecCCHHHHHHHH
Confidence 457777765432233333344433 3333 477776654211 0111222233333333333322 22222 367
Q ss_pred CCCCcceEEecCCchhHHHHHhcCCCeeecc
Q 022811 177 SHPSVSVFLTHGGWNSILESVCGGVPIICWP 207 (291)
Q Consensus 177 ~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P 207 (291)
+++++ +|+- =.-++.=|+.+|+|.++++
T Consensus 249 ~~~~~--vI~~-RlH~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 249 ASARL--VIGM-RLHALILAAAAGVPFVALS 276 (298)
T ss_pred hhCCE--EEEe-chHHHHHHHHcCCCEEEee
Confidence 77776 7763 4556777899999999885
No 186
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=36.05 E-value=3.6e+02 Score=26.65 Aligned_cols=59 Identities=14% Similarity=0.227 Sum_probs=33.6
Q ss_pred EEecCCchhHHH--HHhcCCCeeecccccchhHHHHHHHHHhCc-ceeeCCCCCHHHHHHHHHHHHc
Q 022811 184 FLTHGGWNSILE--SVCGGVPIICWPFFAEQQTNCRYASTTWGI-GMEVNRDASREDIAALVKEIME 247 (291)
Q Consensus 184 fItHgG~~S~~E--al~~GvP~i~~P~~~DQ~~na~~v~~~~G~-G~~l~~~~~~~~l~~ai~~vl~ 247 (291)
++..+|++.+.. ...++-+....-+ ......++.. +.+|+ |.++ -+.++|..++++.+.
T Consensus 470 V~NN~~~g~~~~~~~~~~~~~~~~~~~-~~~~d~~~la-~a~G~~~~~v---~~~~el~~al~~a~~ 531 (586)
T PRK06276 470 IFDNRTLGMVYQWQNLYYGKRQSEVHL-GETPDFVKLA-ESYGVKADRV---EKPDEIKEALKEAIK 531 (586)
T ss_pred EEeCCchHHHHHHHHHHhCCCcccccC-CCCCCHHHHH-HHCCCeEEEE---CCHHHHHHHHHHHHh
Confidence 788888887643 2334443322210 1123455544 66664 3333 468999999999874
No 187
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.99 E-value=2.3e+02 Score=23.32 Aligned_cols=74 Identities=15% Similarity=0.268 Sum_probs=48.9
Q ss_pred hhHHHHHhcCCCeeecccc-cchhHHHHHHHHHhCcceeeC-CCCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 022811 191 NSILESVCGGVPIICWPFF-AEQQTNCRYASTTWGIGMEVN-RDASREDIAALVKEIMEGDKGKLIRQNVQDWRKKA 265 (291)
Q Consensus 191 ~S~~Eal~~GvP~i~~P~~-~DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~ 265 (291)
-|..|--.+|.=-+.==-+ .=+..|+.+. +++|.=..+- +..+.++|.++..+-|.|.+.++++..+.++.+..
T Consensus 88 ~S~~EQasAGLd~Ls~~E~a~f~~LN~aY~-~rFgfPfI~aVkg~~k~~Il~a~~~Rl~n~~e~E~~tAl~eI~rIA 163 (176)
T COG3195 88 ESTSEQASAGLDRLSPEEFARFTELNAAYV-ERFGFPFIIAVKGNTKDTILAAFERRLDNDREQEFATALAEIERIA 163 (176)
T ss_pred hhHHHHHhcCcccCCHHHHHHHHHHHHHHH-HhcCCceEEeecCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 4566666666543321000 1145688888 8889877664 35779999999999998886667777776665554
No 188
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=35.95 E-value=3.4e+02 Score=24.77 Aligned_cols=132 Identities=10% Similarity=0.088 Sum_probs=77.2
Q ss_pred eEEEEcCCcccCCHHHHHHHHHHHH---hCCCCEEEEEcCCCCCCccccccHHHHH----Hhc-CCeEE-eeccCc---c
Q 022811 106 VAYVNYGSITVMTDEQMKEFAWGLA---NSGHPFLWIVRPDMVTGDSAILSQEFYE----EIK-DRGMI-ANWCPQ---D 173 (291)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~~l~---~~~~~~lw~~~~~~~~~~~~~~~~~~~~----~~~-~~~~v-~~w~pq---~ 173 (291)
.+-|-.|..+..++.+++.+ +++. ..+.+++.-++-+. +. +...+...+ -.+ +++.+ ++++|- .
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L-~~l~~~~~~~v~ii~PlsYp~--gn-~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl 221 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEAL-RALHQQFGDNVKIIVPMGYPA--NN-QAYIEEVRQAGLALFGAENFQILTEKLPFDDYL 221 (322)
T ss_pred ceEEEEeCCCCCcccHHHHH-HHHHHHhCCCeEEEEECCcCC--CC-HHHHHHHHHHHHHhcCcccEEehhhhCCHHHHH
Confidence 46666788876666555433 3332 23346665554310 01 111111111 123 57764 567764 4
Q ss_pred cccCCCCcceEEec--CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHH
Q 022811 174 KVLSHPSVSVFLTH--GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIM 246 (291)
Q Consensus 174 ~iL~h~~v~~fItH--gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl 246 (291)
.+|+.++++.|+++ =|.|+++-.++.|+|+++-- +-+.+.- + .+.|+-+..+. .++...+.++=+++.
T Consensus 222 ~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r---~n~fwqd-l-~e~gv~Vlf~~d~L~~~~v~e~~rql~ 292 (322)
T PRK02797 222 ALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSR---DNPFWQD-L-TEQGLPVLFTGDDLDEDIVREAQRQLA 292 (322)
T ss_pred HHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEec---CCchHHH-H-HhCCCeEEecCCcccHHHHHHHHHHHH
Confidence 59999999888876 48999999999999999753 2222222 3 23477665544 677777777755544
No 189
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=35.34 E-value=84 Score=28.21 Aligned_cols=54 Identities=20% Similarity=0.348 Sum_probs=37.1
Q ss_pred CCCcceEEecCCchhHHHHHh----cCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 178 HPSVSVFLTHGGWNSILESVC----GGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 178 h~~v~~fItHgG~~S~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.+++ +|+-||-||+++++. .++|++++-. - .+|-.. .++.+++.+++.++++++
T Consensus 63 ~~d~--vi~~GGDGt~l~~~~~~~~~~~pilGIn~------------G--~lGFL~--~~~~~~~~~~l~~~~~g~ 120 (291)
T PRK02155 63 RADL--AVVLGGDGTMLGIGRQLAPYGVPLIGINH------------G--RLGFIT--DIPLDDMQETLPPMLAGN 120 (291)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcC------------C--Cccccc--cCCHHHHHHHHHHHHcCC
Confidence 3455 999999999999975 3678877742 0 122222 466788888888887654
No 190
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=35.13 E-value=1.7e+02 Score=28.92 Aligned_cols=27 Identities=22% Similarity=0.385 Sum_probs=21.7
Q ss_pred cceEEecCC------chhHHHHHhcCCCeeecc
Q 022811 181 VSVFLTHGG------WNSILESVCGGVPIICWP 207 (291)
Q Consensus 181 v~~fItHgG------~~S~~Eal~~GvP~i~~P 207 (291)
.++.++|.| .+.+.+|.+.++|+|++-
T Consensus 64 ~gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 64 VGVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred CEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 344888877 457899999999999984
No 191
>PF01924 HypD: Hydrogenase formation hypA family; InterPro: IPR002780 HypD is involved in the hyp operon which is needed for the activity of the three hydrogenase isoenzymes in Escherichia coli. HypD is one of the genes needed for formation of these enzymes []. This protein has been found in Gram-negative and Gram-positive bacteria and Archaea. HypD contains many possible metal binding residues, which may bind to nickel. Transposon insertions into HypD resulted in Rhizobium leguminosarum mutants that lacked any hydrogenase activity in symbiosis with peas [].; GO: 0046872 metal ion binding; PDB: 2Z1D_A.
Probab=34.73 E-value=46 Score=30.72 Aligned_cols=87 Identities=17% Similarity=0.242 Sum_probs=41.1
Q ss_pred ccCCC--CcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCChHH
Q 022811 175 VLSHP--SVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGDKGK 252 (291)
Q Consensus 175 iL~h~--~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~ 252 (291)
+|..+ .+.+||.-|=-.++.-+-. .. .++++.++-..+. .+++.+|-.+|..++.
T Consensus 173 ll~~~~~~idGfi~PGHVs~I~G~~~----------------y~-~l~~~y~~P~vIa-GFEp~diL~ai~~lv~----- 229 (355)
T PF01924_consen 173 LLEDPELKIDGFICPGHVSTIIGSEP----------------YE-FLAEEYGIPCVIA-GFEPLDILQAIYMLVK----- 229 (355)
T ss_dssp HHHTT----SEEEEEHHHHHHHCCHH----------------HH-HHHHCC---EEEE--SSHHHHHHHHHHHHH-----
T ss_pred HHcCCCCCccEEEeCCeeeEEecchh----------------hH-HHHHHcCCCeEEc-CCCHHHHHHHHHHHHH-----
Confidence 55544 7788888764444332211 11 2335566666665 5788888888777764
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 022811 253 LIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEV 286 (291)
Q Consensus 253 ~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l 286 (291)
.+.++-.++.....++|++.| +..+.++|++.
T Consensus 230 qi~~g~~~v~N~Y~r~V~~eG--N~~A~~~i~ev 261 (355)
T PF01924_consen 230 QINEGEAEVENQYPRVVKPEG--NPKAQELINEV 261 (355)
T ss_dssp HHHTT---EEES-TTT--TT----HHHHHHHHHH
T ss_pred HHHCCCCeEEEecceeeCCcc--CHHHHHHHHHH
Confidence 334444444455555666666 34456666654
No 192
>PF06204 CBM_X: Putative carbohydrate binding domain ; InterPro: IPR009342 This domain is conserved in enzymes that have carbohydrates as substrate, and may be a carbohydrate-binding domain.; PDB: 3ACT_B 2CQT_A 3QFY_B 3QFZ_A 2CQS_A 3QG0_B 3AFJ_A 3ACS_A 1V7V_A 1V7X_A ....
Probab=34.31 E-value=26 Score=24.02 Aligned_cols=23 Identities=35% Similarity=0.343 Sum_probs=17.8
Q ss_pred ccCcccccCCCCcceEEecCCch
Q 022811 169 WCPQDKVLSHPSVSVFLTHGGWN 191 (291)
Q Consensus 169 w~pq~~iL~h~~v~~fItHgG~~ 191 (291)
-.|...+|+..+.+++||+.|.|
T Consensus 24 p~P~~n~LsNg~y~~mvt~~G~G 46 (66)
T PF06204_consen 24 PAPWVNVLSNGSYGVMVTNSGSG 46 (66)
T ss_dssp SS--EEEE-SSSEEEEEETTSBE
T ss_pred CCCEEEEeeCCcEEEEEcCCCce
Confidence 36788899999999999999976
No 193
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=34.16 E-value=1.2e+02 Score=27.47 Aligned_cols=54 Identities=24% Similarity=0.388 Sum_probs=38.8
Q ss_pred CCCcceEEecCCchhHHHHHh----cCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 178 HPSVSVFLTHGGWNSILESVC----GGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 178 h~~v~~fItHgG~~S~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.+++ +|+=||-||++.+.. .++|++++.+. .+|-.. .+..+++.+++.+++.++
T Consensus 72 ~~D~--vi~lGGDGT~L~aar~~~~~~~PilGIN~G--------------~lGFL~--~~~~~~~~~~l~~i~~g~ 129 (306)
T PRK03372 72 GCEL--VLVLGGDGTILRAAELARAADVPVLGVNLG--------------HVGFLA--EAEAEDLDEAVERVVDRD 129 (306)
T ss_pred CCCE--EEEEcCCHHHHHHHHHhccCCCcEEEEecC--------------CCceec--cCCHHHHHHHHHHHHcCC
Confidence 4455 999999999999865 47898888531 123332 466788888888888754
No 194
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=33.98 E-value=74 Score=19.78 Aligned_cols=26 Identities=19% Similarity=0.486 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 022811 234 SREDIAALVKEIMEGDKGKLIRQNVQDW 261 (291)
Q Consensus 234 ~~~~l~~ai~~vl~~~~~~~~r~~a~~l 261 (291)
+.++|..||..+.++. .++++.|++.
T Consensus 1 tee~l~~Ai~~v~~g~--~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK--MSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTS--S-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC--CCHHHHHHHH
Confidence 4688999999988663 3777776654
No 195
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=33.86 E-value=92 Score=27.94 Aligned_cols=55 Identities=9% Similarity=0.185 Sum_probs=37.2
Q ss_pred CCCCcceEEecCCchhHHHHHh----cCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 177 SHPSVSVFLTHGGWNSILESVC----GGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 177 ~h~~v~~fItHgG~~S~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
..+++ +|+-||-||++.+.. .++|++++-.. .+|-. ..++.+++.+++.++++++
T Consensus 63 ~~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL--t~~~~~~~~~~l~~i~~g~ 121 (287)
T PRK14077 63 KISDF--LISLGGDGTLISLCRKAAEYDKFVLGIHAG--------------HLGFL--TDITVDEAEKFFQAFFQGE 121 (287)
T ss_pred cCCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEeCC--------------CcccC--CcCCHHHHHHHHHHHHcCC
Confidence 34555 999999999998754 37788877421 12222 1466788888888887654
No 196
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=33.86 E-value=2e+02 Score=25.23 Aligned_cols=51 Identities=16% Similarity=0.341 Sum_probs=35.7
Q ss_pred eEEecCCchhHHHHHh-cCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 183 VFLTHGGWNSILESVC-GGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 183 ~fItHgG~~S~~Eal~-~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.+|+=||-||++.|.. .++|++++-.. .+|... .++.+++.+++.++++++
T Consensus 44 ~vi~iGGDGT~L~a~~~~~~Pilgin~G--------------~lGfl~--~~~~~~~~~~l~~~~~g~ 95 (256)
T PRK14075 44 LIIVVGGDGTVLKAAKKVGTPLVGFKAG--------------RLGFLS--SYTLEEIDRFLEDLKNWN 95 (256)
T ss_pred EEEEECCcHHHHHHHHHcCCCEEEEeCC--------------CCcccc--ccCHHHHHHHHHHHHcCC
Confidence 3999999999999875 47787776421 122222 466788888888887654
No 197
>PRK09071 hypothetical protein; Validated
Probab=33.39 E-value=2e+02 Score=26.25 Aligned_cols=67 Identities=13% Similarity=0.139 Sum_probs=45.3
Q ss_pred HHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 022811 215 NCRYASTTWGIGMEVNRDASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHY 289 (291)
Q Consensus 215 na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 289 (291)
-+..+ +..|-|..-.++++.++.++++..+|+++-. ..+..|-- -+.+-.|-+...+..|++.++++
T Consensus 4 ~~~~i-k~vg~gk~~~~~Lt~eEa~~~~~~il~g~~~-~~q~aAfL------~alr~kgeT~eEi~g~~~a~r~~ 70 (323)
T PRK09071 4 FAEYI-RILGKGKRGRRSLTREEARQAMGMILDGEVE-DDQLGAFL------MLLRVKEETAEELAGFVEAIRER 70 (323)
T ss_pred HHHHH-HHHcCCCCCCCCCCHHHHHHHHHHHHcCCCC-HHHHHHHH------HHHHHcCCCHHHHHHHHHHHHHh
Confidence 45566 6779999887799999999999999986511 12222111 12233567778888888877753
No 198
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=33.28 E-value=2e+02 Score=22.46 Aligned_cols=26 Identities=15% Similarity=0.301 Sum_probs=20.6
Q ss_pred eEEecCC------chhHHHHHhcCCCeeeccc
Q 022811 183 VFLTHGG------WNSILESVCGGVPIICWPF 208 (291)
Q Consensus 183 ~fItHgG------~~S~~Eal~~GvP~i~~P~ 208 (291)
++++|+| .+.+.+|...++|+|++.-
T Consensus 62 v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 62 VVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred EEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 3788866 4477889999999999964
No 199
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=33.20 E-value=1.2e+02 Score=27.15 Aligned_cols=54 Identities=22% Similarity=0.449 Sum_probs=38.5
Q ss_pred CCCcceEEecCCchhHHHHHh----cCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 178 HPSVSVFLTHGGWNSILESVC----GGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 178 h~~v~~fItHgG~~S~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.+++ +|+=||=||++.+.. .++|++++-+. .+|-. ..++.+++.+++.+++++.
T Consensus 64 ~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL--t~~~~~~~~~~l~~i~~g~ 121 (292)
T PRK01911 64 SADM--VISIGGDGTFLRTATYVGNSNIPILGINTG--------------RLGFL--ATVSKEEIEETIDELLNGD 121 (292)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEecC--------------CCCcc--cccCHHHHHHHHHHHHcCC
Confidence 4555 999999999999876 37788887431 12322 1467888888998888754
No 200
>PF05014 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransferase; InterPro: IPR007710 Nucleoside 2-deoxyribosyltransferase (2.4.2.6 from EC) catalyses the cleavage of the glycosidic bonds of 2-deoxyribonucleosides. Nucleoside 2-deoxyribosyltransferases can be divided into two groups based on their substrate specificity: class I enzymes are specific for the transfer of deoxyribose between two purines, while class II enzymes will transfer the deoxyribose between either purines or pyrimidines. The structure of the class I [] and class II [] enzymes are very similar. In class I enzymes, the purine base shields the active site from solvent, which the smaller pyrimidine base cannot do, while in class II enzymes the active site is shielded by a loop (residues 48-62). Both classes of enzymes are found in various Lactobacillus species and participate in nucleoside recycling in these microorganisms. This entry represents both classes of enzymes.; GO: 0050144 nucleoside deoxyribosyltransferase activity, 0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity, 0009159 deoxyribonucleoside monophosphate catabolic process; PDB: 1S2L_A 1S2D_C 1S2I_A 1S3F_B 1S2G_C 2A0K_A 2F67_A 2F64_B 2F62_A 2F2T_A ....
Probab=32.31 E-value=67 Score=24.01 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=23.5
Q ss_pred ccCCCCcceEEecC---CchhHHHH---HhcCCCeeecccc
Q 022811 175 VLSHPSVSVFLTHG---GWNSILES---VCGGVPIICWPFF 209 (291)
Q Consensus 175 iL~h~~v~~fItHg---G~~S~~Ea---l~~GvP~i~~P~~ 209 (291)
.+..+++-.++..+ +.||..|. .+.|+|++++-.-
T Consensus 58 ~i~~~D~via~l~~~~~d~Gt~~ElG~A~algkpv~~~~~d 98 (113)
T PF05014_consen 58 GIRECDIVIANLDGFRPDSGTAFELGYAYALGKPVILLTED 98 (113)
T ss_dssp HHHHSSEEEEEECSSS--HHHHHHHHHHHHTTSEEEEEECC
T ss_pred HHHHCCEEEEECCCCCCCCcHHHHHHHHHHCCCEEEEEEcC
Confidence 44455554455454 89999996 6789999998653
No 201
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=32.02 E-value=1.4e+02 Score=26.84 Aligned_cols=54 Identities=22% Similarity=0.257 Sum_probs=38.6
Q ss_pred CCCcceEEecCCchhHHHHHh----cCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 178 HPSVSVFLTHGGWNSILESVC----GGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 178 h~~v~~fItHgG~~S~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.+++ +|+=||=||++.+.. .++|++++-.. .+|-.- .++.+++.+++.++++++
T Consensus 68 ~~D~--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL~--~~~~~~~~~~l~~i~~g~ 125 (296)
T PRK04539 68 YCDL--VAVLGGDGTFLSVAREIAPRAVPIIGINQG--------------HLGFLT--QIPREYMTDKLLPVLEGK 125 (296)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcccCCCEEEEecC--------------CCeEee--ccCHHHHHHHHHHHHcCC
Confidence 4555 999999999999864 47898887421 123332 467788888888888654
No 202
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=31.31 E-value=47 Score=26.96 Aligned_cols=27 Identities=19% Similarity=0.411 Sum_probs=21.4
Q ss_pred ceEEecCCch------hHHHHHhcCCCeeeccc
Q 022811 182 SVFLTHGGWN------SILESVCGGVPIICWPF 208 (291)
Q Consensus 182 ~~fItHgG~~------S~~Eal~~GvP~i~~P~ 208 (291)
+++++|+|-| .+.||...++|||++.-
T Consensus 62 gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 94 (162)
T cd07037 62 VAVVCTSGTAVANLLPAVVEAYYSGVPLLVLTA 94 (162)
T ss_pred EEEEECCchHHHHHhHHHHHHHhcCCCEEEEEC
Confidence 3378888744 67899999999999953
No 203
>PF08452 DNAP_B_exo_N: DNA polymerase family B exonuclease domain, N-terminal; InterPro: IPR013660 This domain is found in viral DNA polymerases to the N terminus of DNA polymerase family B exonuclease domains (IPR006133 from INTERPRO). ; GO: 0003887 DNA-directed DNA polymerase activity
Probab=30.63 E-value=24 Score=18.36 Aligned_cols=17 Identities=18% Similarity=0.866 Sum_probs=13.7
Q ss_pred hhHhhhccCCCCceEEE
Q 022811 93 ECLKWLNEKEPNSVAYV 109 (291)
Q Consensus 93 ~~~~wl~~~~~~~vvyv 109 (291)
.|..|.+++.++..+|.
T Consensus 4 kCiNWFE~~ge~r~lyL 20 (22)
T PF08452_consen 4 KCINWFESRGEERFLYL 20 (22)
T ss_pred EEeehhhhCCceeEEEE
Confidence 47789998888878875
No 204
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=29.47 E-value=79 Score=25.56 Aligned_cols=27 Identities=11% Similarity=0.315 Sum_probs=20.5
Q ss_pred ceEEecCC------chhHHHHHhcCCCeeeccc
Q 022811 182 SVFLTHGG------WNSILESVCGGVPIICWPF 208 (291)
Q Consensus 182 ~~fItHgG------~~S~~Eal~~GvP~i~~P~ 208 (291)
+++++|.| .+++.+|...++|+|++.-
T Consensus 66 ~v~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g 98 (172)
T PF02776_consen 66 GVVIVTSGPGATNALTGLANAYADRIPVLVITG 98 (172)
T ss_dssp EEEEEETTHHHHTTHHHHHHHHHTT-EEEEEEE
T ss_pred eEEEeecccchHHHHHHHhhcccceeeEEEEec
Confidence 34788877 4577889999999999875
No 205
>COG1609 PurR Transcriptional regulators [Transcription]
Probab=29.24 E-value=3.6e+02 Score=24.39 Aligned_cols=32 Identities=13% Similarity=0.235 Sum_probs=12.9
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHhCCC
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLANSGH 134 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~ 134 (291)
.+.+.|++.+.......+...-+.+++++.+.
T Consensus 175 ~~~i~~i~~~~~~~~~~~R~~Gf~~al~~~~~ 206 (333)
T COG1609 175 HRRIAFIGGPLDSSASRERLEGYRAALREAGL 206 (333)
T ss_pred CceEEEEeCCCccccHhHHHHHHHHHHHHCCC
Confidence 34444444443222223334444444444443
No 206
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=28.81 E-value=1.4e+02 Score=24.39 Aligned_cols=30 Identities=20% Similarity=0.258 Sum_probs=21.1
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHhC
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLANS 132 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~ 132 (291)
.+..+|+++||........++..+..|...
T Consensus 6 ~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~ 35 (163)
T PRK14092 6 ASALAYVGLGANLGDAAATLRSVLAELAAA 35 (163)
T ss_pred cCCEEEEEecCchHhHHHHHHHHHHHHHhC
Confidence 445789999999754556666666666553
No 207
>PF03352 Adenine_glyco: Methyladenine glycosylase; InterPro: IPR005019 This family of methyladenine glycosylases includes DNA-3-methyladenine glycosylase I (3.2.2.20 from EC) which acts as a base excision repair enzyme by severing the glycosylic bond of numerous damaged bases. The enzyme is constitutively expressed and is specific for the alkylated 3-methyladenine DNA.; GO: 0008725 DNA-3-methyladenine glycosylase I activity, 0006284 base-excision repair; PDB: 2OFI_A 2OFK_A 2JG6_A 4AIA_E 4AI5_C 4AI4_A 1LMZ_A 1P7M_A 1NKU_A.
Probab=28.10 E-value=58 Score=27.07 Aligned_cols=75 Identities=11% Similarity=0.111 Sum_probs=40.5
Q ss_pred ecccccchhHHHHHHHHHhCcceeeC----C---------CCCHHHHH----HHHHHHHcCCh-------HHHHHHHHHH
Q 022811 205 CWPFFAEQQTNCRYASTTWGIGMEVN----R---------DASREDIA----ALVKEIMEGDK-------GKLIRQNVQD 260 (291)
Q Consensus 205 ~~P~~~DQ~~na~~v~~~~G~G~~l~----~---------~~~~~~l~----~ai~~vl~~~~-------~~~~r~~a~~ 260 (291)
+.|.+.|+......+-+.+-+|+... + .++.+.++ +-|.++|.|+. -++...||+.
T Consensus 17 G~P~~dD~~LFe~L~Le~fQaGLsW~~Il~Kr~~~r~aF~~Fd~~~vA~~~e~~ie~l~~d~~iIRnr~KI~Avi~NA~~ 96 (179)
T PF03352_consen 17 GRPVHDDRKLFEMLTLEGFQAGLSWSTILKKREAFREAFAGFDPEKVAKMDEEDIERLMQDPGIIRNRRKIRAVINNARA 96 (179)
T ss_dssp TSS---HHHHHHHHHHHHHTTTS-HHHHHHTHHHHHHHTGGGHHHHHHT--HHHHHHHTTSTTSS--HHHHHHHHHHHHH
T ss_pred CCcccCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHCCCHHHHHcCCHHHHHHHhcCcchhhhHHHHHHHHHHHHH
Confidence 35778899888877767777887653 1 34444442 35667888772 1344555555
Q ss_pred HHHHHHHHHhcCCChHHHHHHHH
Q 022811 261 WRKKAEAATDVGGASFNNFNKCI 283 (291)
Q Consensus 261 l~~~~~~a~~~gg~s~~~~~~~v 283 (291)
+.+.. +++||-.+.+..|+
T Consensus 97 ~l~i~----~e~gsF~~ylw~f~ 115 (179)
T PF03352_consen 97 ILKIQ----EEFGSFSDYLWSFV 115 (179)
T ss_dssp HHHHH----HTTS-HHHHHHHCT
T ss_pred HHHHH----HhcCCHHHHHHhcC
Confidence 44443 34666655555544
No 208
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=28.04 E-value=4.2e+02 Score=23.31 Aligned_cols=140 Identities=15% Similarity=0.152 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHhCCCCEEEEEcCCCCCCcc---c---cccHHHHHHhcCCeEEeeccCcccccCCC--C----cceEEec
Q 022811 120 EQMKEFAWGLANSGHPFLWIVRPDMVTGDS---A---ILSQEFYEEIKDRGMIANWCPQDKVLSHP--S----VSVFLTH 187 (291)
Q Consensus 120 ~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~---~---~~~~~~~~~~~~~~~v~~w~pq~~iL~h~--~----v~~fItH 187 (291)
..+..+++.|...+++||..+.+-.....+ . .+-++-.+..|+|+.+.--.....+++.. + ...-|+.
T Consensus 92 ~~l~~l~~~l~~~~~kFIlf~DDLsFe~~d~~yk~LKs~LeGgle~~P~NvliyATSNRRHLv~E~~~d~~~~~~~eih~ 171 (249)
T PF05673_consen 92 GDLPELLDLLRDRPYKFILFCDDLSFEEGDTEYKALKSVLEGGLEARPDNVLIYATSNRRHLVPESFSDREDIQDDEIHP 171 (249)
T ss_pred ccHHHHHHHHhcCCCCEEEEecCCCCCCCcHHHHHHHHHhcCccccCCCcEEEEEecchhhccchhhhhccCCCccccCc
Confidence 346777888888889999888753222111 0 11111122347888765433333332210 0 0001111
Q ss_pred CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC----hHHHHHHHHHHHHH
Q 022811 188 GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD----KGKLIRQNVQDWRK 263 (291)
Q Consensus 188 gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~----~~~~~r~~a~~l~~ 263 (291)
.=++.|. ..+++++|+-+... .++.++--+.|+..+... +-+.+++.|.+++.
T Consensus 172 --~d~~eEk--------------------lSLsDRFGL~l~F~-~~~q~~YL~IV~~~~~~~g~~~~~e~l~~~Al~wa~ 228 (249)
T PF05673_consen 172 --SDTIEEK--------------------LSLSDRFGLWLSFY-PPDQEEYLAIVRHYAERYGLELDEEELRQEALQWAL 228 (249)
T ss_pred --chHHHHH--------------------HhHHHhCCcEEEec-CCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 0122222 23456666666554 577787777777776311 11367777777654
Q ss_pred HHHHHHhcCCChHHHHHHHHHHHHh
Q 022811 264 KAEAATDVGGASFNNFNKCIKEVLH 288 (291)
Q Consensus 264 ~~~~a~~~gg~s~~~~~~~v~~l~~ 288 (291)
. .||.|-+.+.+|++.+.-
T Consensus 229 ~------rg~RSGRtA~QF~~~l~g 247 (249)
T PF05673_consen 229 R------RGGRSGRTARQFIDDLAG 247 (249)
T ss_pred H------cCCCCHHHHHHHHHHHhc
Confidence 4 488889999999998864
No 209
>PRK06546 pyruvate dehydrogenase; Provisional
Probab=27.99 E-value=6e+02 Score=25.08 Aligned_cols=58 Identities=16% Similarity=0.232 Sum_probs=33.5
Q ss_pred EEecCCchhHH-HHHhcCCCeeecccccchhHHHHHHHHHhCc-ceeeCCCCCHHHHHHHHHHHHc
Q 022811 184 FLTHGGWNSIL-ESVCGGVPIICWPFFAEQQTNCRYASTTWGI-GMEVNRDASREDIAALVKEIME 247 (291)
Q Consensus 184 fItHgG~~S~~-Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~-G~~l~~~~~~~~l~~ai~~vl~ 247 (291)
++..+|++.+. +....|.+-... .....+.++.. +.+|+ |..+ -+.++|.+++++.+.
T Consensus 459 V~NN~~~g~i~~~q~~~~~~~~~~--~~~~~df~~lA-~a~G~~~~~v---~~~~el~~al~~a~~ 518 (578)
T PRK06546 459 VFNNSTLGMVKLEMLVDGLPDFGT--DHPPVDYAAIA-AALGIHAVRV---EDPKDVRGALREAFA 518 (578)
T ss_pred EEECCccccHHHHHHhcCCCcccc--cCCCCCHHHHH-HHCCCeeEEe---CCHHHHHHHHHHHHh
Confidence 78888888763 222233231111 12234556555 66665 3444 378999999999874
No 210
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=27.89 E-value=5.2e+02 Score=24.35 Aligned_cols=135 Identities=14% Similarity=0.198 Sum_probs=71.6
Q ss_pred CceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCC-eEEeecc-------Ccccc
Q 022811 104 NSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDR-GMIANWC-------PQDKV 175 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~w~-------pq~~i 175 (291)
+.+++.--||.+.. ....+++.|.+.++.+-.++... ....+.....+.+.++ ++...|- .+..+
T Consensus 7 k~IllgvTGsiaa~---k~~~lv~~L~~~g~~V~vv~T~~----A~~fi~~~~l~~l~~~~V~~~~~~~~~~~~~~hi~l 79 (399)
T PRK05579 7 KRIVLGVSGGIAAY---KALELVRRLRKAGADVRVVMTEA----AKKFVTPLTFQALSGNPVSTDLWDPAAEAAMGHIEL 79 (399)
T ss_pred CeEEEEEeCHHHHH---HHHHHHHHHHhCCCEEEEEECHh----HHHHHhHHHHHHhhCCceEccccccccCCCcchhhc
Confidence 44666666766432 34556667777787766655432 1111111112223333 3322232 23334
Q ss_pred cCCCCcceEEecCCchhHHH-------------HHhcCCCeeeccccc----c---hhHHHHHHHHHhCcceeeC-----
Q 022811 176 LSHPSVSVFLTHGGWNSILE-------------SVCGGVPIICWPFFA----E---QQTNCRYASTTWGIGMEVN----- 230 (291)
Q Consensus 176 L~h~~v~~fItHgG~~S~~E-------------al~~GvP~i~~P~~~----D---Q~~na~~v~~~~G~G~~l~----- 230 (291)
...+++ .+|.-|-+||+.. ++++++|+++.|-.. . -..|...+ ..+|+-+.-.
T Consensus 80 ~~~aD~-~vVaPaTaNtlaKiA~GiaDnllt~~~la~~~pvvi~Pamn~~m~~~p~~~~Nl~~L-~~~G~~ii~P~~g~l 157 (399)
T PRK05579 80 AKWADL-VLIAPATADLIAKLAHGIADDLLTTTLLATTAPVLVAPAMNTQMWENPATQRNLATL-RSRGVEIIGPASGRL 157 (399)
T ss_pred ccccCE-EEEeeCCHHHHHHHHcccCCcHHHHHHHhcCCCEEEEeCCChhHcCCHHHHHHHHHH-HHCCCEEECCCCccc
Confidence 444554 4567777776543 356799999999543 2 23355666 4455543221
Q ss_pred --------CCCCHHHHHHHHHHHHc
Q 022811 231 --------RDASREDIAALVKEIME 247 (291)
Q Consensus 231 --------~~~~~~~l~~ai~~vl~ 247 (291)
+-.+.++|...+.+.+.
T Consensus 158 a~~~~g~gr~~~~~~I~~~~~~~~~ 182 (399)
T PRK05579 158 ACGDVGPGRMAEPEEIVAAAERALS 182 (399)
T ss_pred cCCCcCCCCCCCHHHHHHHHHHHhh
Confidence 13577888888877764
No 211
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=27.76 E-value=6.1e+02 Score=25.17 Aligned_cols=142 Identities=11% Similarity=0.144 Sum_probs=72.6
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcc
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVS 182 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~ 182 (291)
+.+.|-|-+||.. +...+++....|...+..+-..+-+- ...|+.+.+-. -+.. ...++
T Consensus 409 ~~~~v~i~~gs~s--d~~~~~~~~~~l~~~g~~~~~~v~sa------hr~~~~~~~~~----------~~~~---~~~~~ 467 (577)
T PLN02948 409 GTPLVGIIMGSDS--DLPTMKDAAEILDSFGVPYEVTIVSA------HRTPERMFSYA----------RSAH---SRGLQ 467 (577)
T ss_pred CCCeEEEEECchh--hHHHHHHHHHHHHHcCCCeEEEEECC------ccCHHHHHHHH----------HHHH---HCCCC
Confidence 3456777788875 56778888888888887765444321 13444332110 0000 01123
Q ss_pred eEEecCCchhHHHHHhc---CCCeeecccccc--hhHHHH-HHHHHh--Cccee---eCCCCCHHHHHHHHHHHH--cCC
Q 022811 183 VFLTHGGWNSILESVCG---GVPIICWPFFAE--QQTNCR-YASTTW--GIGME---VNRDASREDIAALVKEIM--EGD 249 (291)
Q Consensus 183 ~fItHgG~~S~~Eal~~---GvP~i~~P~~~D--Q~~na~-~v~~~~--G~G~~---l~~~~~~~~l~~ai~~vl--~~~ 249 (291)
+||.=.|.-.-+-.+.+ -+|+|.+|.-.. -...+- .+ -.+ |+.+. ++...++.-+. .+++ .|+
T Consensus 468 v~i~~ag~~~~l~~~~a~~t~~pvi~vp~~~~~~~g~~~l~s~-~~~p~g~pv~~v~i~~~~~aa~~a---~~i~~~~~~ 543 (577)
T PLN02948 468 VIIAGAGGAAHLPGMVASMTPLPVIGVPVKTSHLDGLDSLLSI-VQMPRGVPVATVAIGNATNAGLLA---VRMLGASDP 543 (577)
T ss_pred EEEEEcCccccchHHHhhccCCCEEEcCCCCCCCCcHHHHHHH-hcCCCCCeEEEEecCChHHHHHHH---HHHHhcCCH
Confidence 47777775544444433 359999998432 122221 12 124 43222 12222333333 3444 355
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcC
Q 022811 250 KGKLIRQNVQDWRKKAEAATDVG 272 (291)
Q Consensus 250 ~~~~~r~~a~~l~~~~~~a~~~g 272 (291)
.++++.+..++.+++.+.+.
T Consensus 544 ---~~~~~~~~~~~~~~~~~~~~ 563 (577)
T PLN02948 544 ---DLLDKMEAYQEDMRDMVLEK 563 (577)
T ss_pred ---HHHHHHHHHHHHHHHHHHhh
Confidence 67777777777777655443
No 212
>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function.
Probab=27.51 E-value=1e+02 Score=28.19 Aligned_cols=66 Identities=24% Similarity=0.535 Sum_probs=36.8
Q ss_pred HHHhcCCCeeecccccchhHHHHH----HHHHhCc--ceeeCC----CCCHHHHHHHHHHHHcCChH-HHHHHHHHH
Q 022811 195 ESVCGGVPIICWPFFAEQQTNCRY----ASTTWGI--GMEVNR----DASREDIAALVKEIMEGDKG-KLIRQNVQD 260 (291)
Q Consensus 195 Eal~~GvP~i~~P~~~DQ~~na~~----v~~~~G~--G~~l~~----~~~~~~l~~ai~~vl~~~~~-~~~r~~a~~ 260 (291)
--++.=.|++++|+..|+..|.-. +...+|. ++..+. .....-+...|+++.++.+| ..+++..++
T Consensus 20 p~~~~llp~~~~pfls~~qk~y~~f~f~~iss~gwff~i~~re~qlk~aa~~llq~kirk~~e~~eglr~i~es~~e 96 (401)
T PF06785_consen 20 PVAAFLLPLVCYPFLSDSQKNYGYFVFSIISSLGWFFAIGRREKQLKTAAGQLLQTKIRKITEKDEGLRKIRESVEE 96 (401)
T ss_pred hHHHHHHHHhHhhhcCHHHHhcceeehHHHHHhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 334444699999999988776421 1122232 122221 12234467788888887776 455554443
No 213
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=27.43 E-value=1.1e+02 Score=27.19 Aligned_cols=75 Identities=12% Similarity=0.251 Sum_probs=46.0
Q ss_pred cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcceEEecCCchhHHH
Q 022811 116 VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILE 195 (291)
Q Consensus 116 ~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~E 195 (291)
....+..+++.+++.+.....||..+.... -.++.++++...+-.+|.+ ||=+.-..+++-
T Consensus 45 ~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~g-----------------a~rlL~~ld~~~~~~~pK~--~iGySDiTaL~~ 105 (282)
T cd07025 45 GTDEERAADLNAAFADPEIKAIWCARGGYG-----------------ANRLLPYLDYDLIRANPKI--FVGYSDITALHL 105 (282)
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcCCcCC-----------------HHHhhhhCCHHHHhhCCeE--EEEecHHHHHHH
Confidence 345677899999999999999999875411 0112222333333355555 666666666666
Q ss_pred HHhc--CCCeeecccc
Q 022811 196 SVCG--GVPIICWPFF 209 (291)
Q Consensus 196 al~~--GvP~i~~P~~ 209 (291)
+++. |++.+-=|+.
T Consensus 106 ~l~~~~g~~t~hGp~~ 121 (282)
T cd07025 106 ALYAKTGLVTFHGPML 121 (282)
T ss_pred HHHHhcCceEEECccc
Confidence 6643 6666555543
No 214
>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit. This model represents the alpha subunit, or the N-terminal region, of sulfopyruvate decarboxylase, an enzyme of coenzyme M biosynthesis. Coenzyme M is found almost exclusively in the methanogenic archaea. However, the enzyme also occurs in Roseovarius nubinhibens ISM in a degradative pathway, where the resulting sulfoacetaldehyde is desulfonated to acetyl phosphate, then converted to acetyl-CoA (see PubMed:19581363).
Probab=27.14 E-value=1.5e+02 Score=23.84 Aligned_cols=25 Identities=16% Similarity=0.373 Sum_probs=18.5
Q ss_pred eEEecCCc----hhHHHHH-hcCCCeeecc
Q 022811 183 VFLTHGGW----NSILESV-CGGVPIICWP 207 (291)
Q Consensus 183 ~fItHgG~----~S~~Eal-~~GvP~i~~P 207 (291)
+++.+.|. |.+.+|. .+++|+|++=
T Consensus 62 v~~~~sG~gn~~~~l~~a~~~~~~Pvl~i~ 91 (157)
T TIGR03845 62 ILMQSSGLGNSINALASLNKTYGIPLPILA 91 (157)
T ss_pred EEEeCCcHHHHHHHHHHHHHcCCCCEEEEE
Confidence 36666664 4667777 9999999986
No 215
>COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]
Probab=27.09 E-value=3.4e+02 Score=22.02 Aligned_cols=139 Identities=16% Similarity=0.188 Sum_probs=76.0
Q ss_pred eEEEEcCCcccCCHHHHHHHHHHHHhCCCCEE-EEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcceE
Q 022811 106 VAYVNYGSITVMTDEQMKEFAWGLANSGHPFL-WIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVF 184 (291)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~l-w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~f 184 (291)
.|-|-+||.. +.+.+++.++.|.+.++.+- +++..+ ..|+.+.+-. .=.....+++|
T Consensus 4 ~V~IIMGS~S--D~~~mk~Aa~~L~~fgi~ye~~VvSAH-------RTPe~m~~ya-------------~~a~~~g~~vi 61 (162)
T COG0041 4 KVGIIMGSKS--DWDTMKKAAEILEEFGVPYEVRVVSAH-------RTPEKMFEYA-------------EEAEERGVKVI 61 (162)
T ss_pred eEEEEecCcc--hHHHHHHHHHHHHHcCCCeEEEEEecc-------CCHHHHHHHH-------------HHHHHCCCeEE
Confidence 4777899986 56778888889998887764 444332 2333322111 00112345556
Q ss_pred EecCCch----hHHHHHhcCCCeeecccccch---hHHHHHHHHHhCcceeeC-----CCCCHHHHHHHHHHHHcCChHH
Q 022811 185 LTHGGWN----SILESVCGGVPIICWPFFAEQ---QTNCRYASTTWGIGMEVN-----RDASREDIAALVKEIMEGDKGK 252 (291)
Q Consensus 185 ItHgG~~----S~~Eal~~GvP~i~~P~~~DQ---~~na~~v~~~~G~G~~l~-----~~~~~~~l~~ai~~vl~~~~~~ 252 (291)
|.-.|.- .+..|. .-+|+|++|....- .+--..+ -.+-.|+=+. +..|..-+...|- .+.|+
T Consensus 62 IAgAGgAAHLPGmvAa~-T~lPViGVPv~s~~L~GlDSL~Si-VQMP~GvPVaTvaIg~a~NAallAa~IL-a~~d~--- 135 (162)
T COG0041 62 IAGAGGAAHLPGMVAAK-TPLPVIGVPVQSKALSGLDSLLSI-VQMPAGVPVATVAIGNAANAALLAAQIL-AIKDP--- 135 (162)
T ss_pred EecCcchhhcchhhhhc-CCCCeEeccCccccccchHHHHHH-hcCCCCCeeEEEeecchhhHHHHHHHHH-cCCCH---
Confidence 7655532 222333 36799999986321 1222223 2345555332 1233333333221 23467
Q ss_pred HHHHHHHHHHHHHHHHHhcC
Q 022811 253 LIRQNVQDWRKKAEAATDVG 272 (291)
Q Consensus 253 ~~r~~a~~l~~~~~~a~~~g 272 (291)
.++++..++++..++.+.+.
T Consensus 136 ~l~~kl~~~r~~~~~~V~~~ 155 (162)
T COG0041 136 ELAEKLAEFREAQTEEVLED 155 (162)
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 89999999998888765443
No 216
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=27.01 E-value=69 Score=31.92 Aligned_cols=92 Identities=15% Similarity=0.184 Sum_probs=46.5
Q ss_pred cccCCCCcceEEecC-Cch-hHHHHHhcCCCeeecccc-cchhHHHHHH-HHHhCcceeeCCCCCHHHHHHHHHHHHc--
Q 022811 174 KVLSHPSVSVFLTHG-GWN-SILESVCGGVPIICWPFF-AEQQTNCRYA-STTWGIGMEVNRDASREDIAALVKEIME-- 247 (291)
Q Consensus 174 ~iL~h~~v~~fItHg-G~~-S~~Eal~~GvP~i~~P~~-~DQ~~na~~v-~~~~G~G~~l~~~~~~~~l~~ai~~vl~-- 247 (291)
+++.-++++.|-+-= =|| |-+||++.|||.|.-=+. +-++.+-..- ....|+-+.=+...+.++..+.+.+.|.
T Consensus 465 dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f 544 (633)
T PF05693_consen 465 DFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKF 544 (633)
T ss_dssp HHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHH
T ss_pred HHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 344455665555421 133 789999999999997763 2333322111 0223444443446677777777666663
Q ss_pred ---CC-hHHHHHHHHHHHHHHH
Q 022811 248 ---GD-KGKLIRQNVQDWRKKA 265 (291)
Q Consensus 248 ---~~-~~~~~r~~a~~l~~~~ 265 (291)
+. +-...|+++.++++.+
T Consensus 545 ~~~~~rqri~~Rn~ae~LS~~~ 566 (633)
T PF05693_consen 545 CQLSRRQRIIQRNRAERLSDLA 566 (633)
T ss_dssp HT--HHHHHHHHHHHHHHGGGG
T ss_pred HhCCHHHHHHHHHHHHHHHHhC
Confidence 11 1245677777766553
No 217
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=26.68 E-value=1.4e+02 Score=27.13 Aligned_cols=52 Identities=15% Similarity=0.358 Sum_probs=36.7
Q ss_pred ceEEecCCchhHHHHHhc----CCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 182 SVFLTHGGWNSILESVCG----GVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 182 ~~fItHgG~~S~~Eal~~----GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.++|+=||=||++.+... ++|++++-+. .+|-. ..++.+++.+++.++++++
T Consensus 70 Dlvi~iGGDGTlL~aar~~~~~~iPilGIN~G--------------~lGFL--t~~~~~~~~~~l~~l~~g~ 125 (305)
T PRK02649 70 KFAIVLGGDGTVLSAARQLAPCGIPLLTINTG--------------HLGFL--TEAYLNQLDEAIDQVLAGQ 125 (305)
T ss_pred CEEEEEeCcHHHHHHHHHhcCCCCcEEEEeCC--------------CCccc--ccCCHHHHHHHHHHHHcCC
Confidence 349999999999998753 7788887420 12222 1456788888888888754
No 218
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=26.66 E-value=1.7e+02 Score=26.29 Aligned_cols=54 Identities=15% Similarity=0.266 Sum_probs=37.6
Q ss_pred CCCcceEEecCCchhHHHHHh----cCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 178 HPSVSVFLTHGGWNSILESVC----GGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 178 h~~v~~fItHgG~~S~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.+++ +|+=||=||++.+.. .++|++.+-.. .+|-.- .++.+++.+++++++++.
T Consensus 63 ~~d~--vi~lGGDGT~L~aa~~~~~~~~Pilgin~G--------------~lGFl~--~~~~~~~~~~l~~i~~g~ 120 (292)
T PRK03378 63 QADL--AIVVGGDGNMLGAARVLARYDIKVIGINRG--------------NLGFLT--DLDPDNALQQLSDVLEGH 120 (292)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCeEEEEECC--------------CCCccc--ccCHHHHHHHHHHHHcCC
Confidence 4555 999999999999974 36787776431 122221 456788889999988754
No 219
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=26.32 E-value=2.2e+02 Score=25.21 Aligned_cols=42 Identities=17% Similarity=0.179 Sum_probs=28.7
Q ss_pred cccccCCCCcceEEecCCch-----hHHHHHhcCCCeeecccccchh
Q 022811 172 QDKVLSHPSVSVFLTHGGWN-----SILESVCGGVPIICWPFFAEQQ 213 (291)
Q Consensus 172 q~~iL~h~~v~~fItHgG~~-----S~~Eal~~GvP~i~~P~~~DQ~ 213 (291)
+...+...++-.+|+|.|.. .+..|-..|+|+|.+=-..+-+
T Consensus 171 ~~~~~~~~Dv~i~iS~sG~t~e~i~~a~~ak~~ga~vIaiT~~~~sp 217 (281)
T COG1737 171 QLALLTPGDVVIAISFSGYTREIVEAAELAKERGAKVIAITDSADSP 217 (281)
T ss_pred HHHhCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEcCCCCCc
Confidence 34456666777799999965 3445568899999986544433
No 220
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=25.86 E-value=4.3e+02 Score=22.75 Aligned_cols=45 Identities=18% Similarity=0.221 Sum_probs=34.1
Q ss_pred hHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEE
Q 022811 94 CLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWI 139 (291)
Q Consensus 94 ~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~ 139 (291)
+.+++... .++|.||=+-|.........++..++|++.|+.+.-.
T Consensus 24 i~n~l~g~-~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L 68 (224)
T COG3340 24 IANFLQGK-RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSEL 68 (224)
T ss_pred HHHHhcCC-CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeee
Confidence 34445443 4689999998887767778999999999999876544
No 221
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=25.68 E-value=1.9e+02 Score=25.97 Aligned_cols=54 Identities=19% Similarity=0.314 Sum_probs=38.6
Q ss_pred CCCcceEEecCCchhHHHHHh----cCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 178 HPSVSVFLTHGGWNSILESVC----GGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 178 h~~v~~fItHgG~~S~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.+++ +|+=||-||++++.. .++|++++... .+|.. ..++.+++.++|.+++.++
T Consensus 62 ~~d~--vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G--------------~lGFl--~~~~~~~~~~~l~~~~~g~ 119 (295)
T PRK01231 62 VCDL--VIVVGGDGSLLGAARALARHNVPVLGINRG--------------RLGFL--TDIRPDELEFKLAEVLDGH 119 (295)
T ss_pred CCCE--EEEEeCcHHHHHHHHHhcCCCCCEEEEeCC--------------ccccc--ccCCHHHHHHHHHHHHcCC
Confidence 3455 999999999999874 36788887641 12322 2567888999999998754
No 222
>PRK11914 diacylglycerol kinase; Reviewed
Probab=25.66 E-value=4e+02 Score=23.68 Aligned_cols=26 Identities=19% Similarity=0.302 Sum_probs=22.0
Q ss_pred eEEecCCchhHHHHH----hcCCCeeeccc
Q 022811 183 VFLTHGGWNSILESV----CGGVPIICWPF 208 (291)
Q Consensus 183 ~fItHgG~~S~~Eal----~~GvP~i~~P~ 208 (291)
.+|.-||=||+.|++ ..++|+-++|.
T Consensus 67 ~vvv~GGDGTi~evv~~l~~~~~~lgiiP~ 96 (306)
T PRK11914 67 ALVVVGGDGVISNALQVLAGTDIPLGIIPA 96 (306)
T ss_pred EEEEECCchHHHHHhHHhccCCCcEEEEeC
Confidence 389999999999887 34789999996
No 223
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=24.82 E-value=95 Score=25.37 Aligned_cols=31 Identities=26% Similarity=0.493 Sum_probs=19.9
Q ss_pred HHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 214 TNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 214 ~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
..+.+- +..|+|+.+ |++++.++|.+++...
T Consensus 103 d~~~Fe-~~cGVGV~V----T~E~I~~~V~~~i~~~ 133 (164)
T PF04558_consen 103 DVAEFE-KACGVGVVV----TPEQIEAAVEKYIEEN 133 (164)
T ss_dssp -HHHHH-HTTTTT--------HHHHHHHHHHHHHHT
T ss_pred CHHHHH-HHcCCCeEE----CHHHHHHHHHHHHHHh
Confidence 334333 667999876 7999999999999743
No 224
>PF09547 Spore_IV_A: Stage IV sporulation protein A (spore_IV_A); InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis []. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.
Probab=24.42 E-value=3.3e+02 Score=26.24 Aligned_cols=73 Identities=19% Similarity=0.297 Sum_probs=55.2
Q ss_pred ccCCCCcceEEecCCch--------------hHHHHHhcCCCeeec-----ccccchhHHHHHHHHHhCcceeeCC--CC
Q 022811 175 VLSHPSVSVFLTHGGWN--------------SILESVCGGVPIICW-----PFFAEQQTNCRYASTTWGIGMEVNR--DA 233 (291)
Q Consensus 175 iL~h~~v~~fItHgG~~--------------S~~Eal~~GvP~i~~-----P~~~DQ~~na~~v~~~~G~G~~l~~--~~ 233 (291)
|=.|+-+|.+||--|.- ++.|--.-|+|.|++ |...+-..-+..+.++.++-+..-. .+
T Consensus 141 I~dHSTIGiVVTTDGSi~dipRe~Y~eAEervI~ELk~igKPFvillNs~~P~s~et~~L~~eL~ekY~vpVlpvnc~~l 220 (492)
T PF09547_consen 141 ITDHSTIGIVVTTDGSITDIPRENYVEAEERVIEELKEIGKPFVILLNSTKPYSEETQELAEELEEKYDVPVLPVNCEQL 220 (492)
T ss_pred eccCCceeEEEecCCCccCCChHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCCCHHHHHHHHHHHHHhCCcEEEeehHHc
Confidence 45589999999988843 567778899999986 5555555566677677777776433 78
Q ss_pred CHHHHHHHHHHHHc
Q 022811 234 SREDIAALVKEIME 247 (291)
Q Consensus 234 ~~~~l~~ai~~vl~ 247 (291)
+.+++...++++|-
T Consensus 221 ~~~DI~~Il~~vLy 234 (492)
T PF09547_consen 221 REEDITRILEEVLY 234 (492)
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999999873
No 225
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=24.20 E-value=8.9e+02 Score=25.80 Aligned_cols=99 Identities=13% Similarity=0.097 Sum_probs=53.3
Q ss_pred cccCCCCcceEEe---cCCchhH-HHHHhcCC---CeeecccccchhHHHHHHHHHhC-cceeeCCCCCHHHHHHHHHHH
Q 022811 174 KVLSHPSVSVFLT---HGGWNSI-LESVCGGV---PIICWPFFAEQQTNCRYASTTWG-IGMEVNRDASREDIAALVKEI 245 (291)
Q Consensus 174 ~iL~h~~v~~fIt---HgG~~S~-~Eal~~Gv---P~i~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~l~~ai~~v 245 (291)
.++..+++ |+- .-|+|-+ .|+++++. -+++++-+ .-+. +.+| -|+.++ ..+.++++++|.++
T Consensus 455 AlY~~ADV--~lvTslrDGmNLva~Eyva~~~~~~GvLILSEf----aGaa---~~L~~~AllVN-P~D~~~vA~AI~~A 524 (934)
T PLN03064 455 ALYAVTDV--ALVTSLRDGMNLVSYEFVACQDSKKGVLILSEF----AGAA---QSLGAGAILVN-PWNITEVAASIAQA 524 (934)
T ss_pred HHHHhCCE--EEeCccccccCchHHHHHHhhcCCCCCeEEeCC----CchH---HHhCCceEEEC-CCCHHHHHHHHHHH
Confidence 36677777 433 3477754 69999955 22222321 1111 2344 456666 57889999999999
Q ss_pred HcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 022811 246 MEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLH 288 (291)
Q Consensus 246 l~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~ 288 (291)
|+-+.. .-+++.+++.+.+.. -+...=++.|++.|..
T Consensus 525 L~M~~~-Er~~r~~~~~~~V~~-----~d~~~Wa~~fl~~L~~ 561 (934)
T PLN03064 525 LNMPEE-EREKRHRHNFMHVTT-----HTAQEWAETFVSELND 561 (934)
T ss_pred HhCCHH-HHHHHHHHHHhhccc-----CCHHHHHHHHHHHHHH
Confidence 872211 233333333333322 1334445556666653
No 226
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=24.10 E-value=2.4e+02 Score=23.85 Aligned_cols=98 Identities=18% Similarity=0.203 Sum_probs=61.0
Q ss_pred HHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcceEEecCCchhHHHHHhcC
Q 022811 121 QMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGG 200 (291)
Q Consensus 121 ~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~G 200 (291)
.=.++++.|.+.+..++..-+.. ..+...|.++.+.++. =-||++ .=.++|..+..+|+.+|
T Consensus 67 ~d~~l~~~l~~~~~dlvvLAGyM------rIL~~~fl~~~~grIl----------NIHPSL--LP~f~G~h~~~~A~~aG 128 (200)
T COG0299 67 FDRALVEALDEYGPDLVVLAGYM------RILGPEFLSRFEGRIL----------NIHPSL--LPAFPGLHAHEQALEAG 128 (200)
T ss_pred HHHHHHHHHHhcCCCEEEEcchH------HHcCHHHHHHhhcceE----------ecCccc--ccCCCCchHHHHHHHcC
Confidence 44557777777777766554422 2456667666554332 237887 77889999999999999
Q ss_pred CCeeecccccchhHHHHHHHHHhCcceeeC-------CCCCHHHHHHHHHH
Q 022811 201 VPIICWPFFAEQQTNCRYASTTWGIGMEVN-------RDASREDIAALVKE 244 (291)
Q Consensus 201 vP~i~~P~~~DQ~~na~~v~~~~G~G~~l~-------~~~~~~~l~~ai~~ 244 (291)
+..-++-.++ +.+..-.|-.+. ..-|.++|++.|.+
T Consensus 129 ~k~sG~TVH~--------V~e~vD~GpII~Q~~Vpv~~~Dt~etl~~RV~~ 171 (200)
T COG0299 129 VKVSGCTVHF--------VTEGVDTGPIIAQAAVPVLPGDTAETLEARVLE 171 (200)
T ss_pred CCccCcEEEE--------EccCCCCCCeEEEEeeeecCCCCHHHHHHHHHH
Confidence 9876655421 112233343332 23477778777765
No 227
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=24.02 E-value=87 Score=28.06 Aligned_cols=40 Identities=18% Similarity=0.274 Sum_probs=32.4
Q ss_pred cCCchhH--HHHHhcCCCeeecccccchhHHHHHHHHHhCcc
Q 022811 187 HGGWNSI--LESVCGGVPIICWPFFAEQQTNCRYASTTWGIG 226 (291)
Q Consensus 187 HgG~~S~--~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G 226 (291)
=||||++ .-|-.+|+-++++-+...|..+++......|+.
T Consensus 80 GCGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~ 121 (283)
T COG2230 80 GCGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLE 121 (283)
T ss_pred CCChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCC
Confidence 3788866 455667999999999999999998754677888
No 228
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=23.98 E-value=69 Score=28.97 Aligned_cols=37 Identities=24% Similarity=0.337 Sum_probs=29.6
Q ss_pred ccCCCCcceEEecCCchhHHHHHh----cCCCeeecccccc
Q 022811 175 VLSHPSVSVFLTHGGWNSILESVC----GGVPIICWPFFAE 211 (291)
Q Consensus 175 iL~h~~v~~fItHgG~~S~~Eal~----~GvP~i~~P~~~D 211 (291)
.|..-++..+|.=||.+|+.-|.. .++|+|++|-.-|
T Consensus 86 ~l~~~~Id~Li~IGGdgs~~~a~~L~e~~~i~vigiPkTID 126 (301)
T TIGR02482 86 NLKKLGIEGLVVIGGDGSYTGAQKLYEEGGIPVIGLPGTID 126 (301)
T ss_pred HHHHcCCCEEEEeCCchHHHHHHHHHHhhCCCEEeeccccc
Confidence 455667888999999999877643 7999999998654
No 229
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=23.97 E-value=1.7e+02 Score=27.67 Aligned_cols=26 Identities=23% Similarity=0.454 Sum_probs=21.1
Q ss_pred cceEEecCCc------hhHHHHHhcCCCeeec
Q 022811 181 VSVFLTHGGW------NSILESVCGGVPIICW 206 (291)
Q Consensus 181 v~~fItHgG~------~S~~Eal~~GvP~i~~ 206 (291)
.+++++|+|- +.+.+|.+.++|+|++
T Consensus 64 ~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i 95 (432)
T TIGR00173 64 PVAVVCTSGTAVANLLPAVIEASYSGVPLIVL 95 (432)
T ss_pred CEEEEECCcchHhhhhHHHHHhcccCCcEEEE
Confidence 3348888874 4778999999999999
No 230
>PF14165 YtzH: YtzH-like protein
Probab=23.96 E-value=2.7e+02 Score=20.20 Aligned_cols=36 Identities=22% Similarity=0.285 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcC
Q 022811 234 SREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVG 272 (291)
Q Consensus 234 ~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~g 272 (291)
..+.|++.|+.+|.|+ .+-..++.+=..+-++.+.|
T Consensus 27 EcEQieRLvksLm~n~---~i~~~ik~~L~~Iy~ysq~G 62 (87)
T PF14165_consen 27 ECEQIERLVKSLMANP---NIDADIKQTLEEIYSYSQNG 62 (87)
T ss_pred HHHHHHHHHHHHHcCC---CcCHHHHHHHHHHHHHHccC
Confidence 4588999999999988 66666666666666655554
No 231
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=23.93 E-value=1.9e+02 Score=28.18 Aligned_cols=53 Identities=19% Similarity=0.336 Sum_probs=36.7
Q ss_pred cceEEecCCchhHHHHHhc----CCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 181 VSVFLTHGGWNSILESVCG----GVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 181 v~~fItHgG~~S~~Eal~~----GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
+.++|+=||-||++.|... ++|++++-+ - .+|-. ..++.+++.++|.+++.++
T Consensus 263 ~DlVIsiGGDGTlL~Aar~~~~~~iPILGIN~------------G--~LGFL--t~i~~~e~~~~Le~il~G~ 319 (508)
T PLN02935 263 VDLVITLGGDGTVLWAASMFKGPVPPVVPFSM------------G--SLGFM--TPFHSEQYRDCLDAILKGP 319 (508)
T ss_pred CCEEEEECCcHHHHHHHHHhccCCCcEEEEeC------------C--Cccee--cccCHHHHHHHHHHHHcCC
Confidence 3449999999999999753 567776621 0 13332 2567888889999888754
No 232
>TIGR00624 tag DNA-3-methyladenine glycosylase I. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=23.81 E-value=2.3e+02 Score=23.54 Aligned_cols=60 Identities=13% Similarity=0.070 Sum_probs=38.2
Q ss_pred eecccccchhHHHHHHHHHhCcceeeC----C---------CCCHHHH----HHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 022811 204 ICWPFFAEQQTNCRYASTTWGIGMEVN----R---------DASREDI----AALVKEIMEGDKGKLIRQNVQDWRKKAE 266 (291)
Q Consensus 204 i~~P~~~DQ~~na~~v~~~~G~G~~l~----~---------~~~~~~l----~~ai~~vl~~~~~~~~r~~a~~l~~~~~ 266 (291)
-+.|.+.||......+-+.+-+|+... + .++.+.+ .+-|.++|.|+ .+=+|=+++.+.+.
T Consensus 20 WG~p~~dd~~LFE~L~Le~fQAGLSW~tIL~Kr~~fr~aF~~Fd~~~VA~~~e~~ie~L~~d~---~IIRnr~KI~Avi~ 96 (179)
T TIGR00624 20 WGVPLRDSVALFERMSLEGFQAGLSWITVLRKRENYRRAFSGFDIVKVARMTDADVERLLQDD---GIIRNRGKIEATIA 96 (179)
T ss_pred CCCcCcCCHHHHHHHHHHHHhCcCCHHHHHHhHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCc---cchhhHHHHHHHHH
Confidence 356788999999887767778887653 1 4555555 35677788887 44344344444443
No 233
>COG1422 Predicted membrane protein [Function unknown]
Probab=23.55 E-value=3.1e+02 Score=23.19 Aligned_cols=70 Identities=13% Similarity=0.307 Sum_probs=41.0
Q ss_pred hHHHHHhcCCCeeecccccchhH-HHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHHH
Q 022811 192 SILESVCGGVPIICWPFFAEQQT-NCRYASTTWGIGMEVNRDASREDIAALVKEIMEGDKG-KLIRQNVQDWRKKAEAAT 269 (291)
Q Consensus 192 S~~Eal~~GvP~i~~P~~~DQ~~-na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~-~~~r~~a~~l~~~~~~a~ 269 (291)
|+.++++-+.-.+..|+..=++. -.-.+ ...=+|+ +...++..+-|-|. +++++.++++++++++|-
T Consensus 24 ~~~~~i~~~ln~~f~P~i~~~~p~lvilV-~avi~gl----------~~~i~~~~liD~ekm~~~qk~m~efq~e~~eA~ 92 (201)
T COG1422 24 SIRDGIGGALNVVFGPLLSPLPPHLVILV-AAVITGL----------YITILQKLLIDQEKMKELQKMMKEFQKEFREAQ 92 (201)
T ss_pred HHHHHHHHHHHHHHhhhccccccHHHHHH-HHHHHHH----------HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666666666665433332 22222 2111222 33455566666554 689999999999999985
Q ss_pred hcC
Q 022811 270 DVG 272 (291)
Q Consensus 270 ~~g 272 (291)
+.|
T Consensus 93 ~~~ 95 (201)
T COG1422 93 ESG 95 (201)
T ss_pred HhC
Confidence 544
No 234
>TIGR03837 efp_adjacent_2 conserved hypothetical protein, PP_1857 family. This model describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=23.52 E-value=2.4e+02 Score=26.35 Aligned_cols=98 Identities=18% Similarity=0.289 Sum_probs=58.9
Q ss_pred ccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCc-cccccHH-H--HH-HhcCCe--EEeeccCccc---ccCCCCcceE
Q 022811 115 TVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGD-SAILSQE-F--YE-EIKDRG--MIANWCPQDK---VLSHPSVSVF 184 (291)
Q Consensus 115 ~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~-~~~~~~~-~--~~-~~~~~~--~v~~w~pq~~---iL~h~~v~~f 184 (291)
.......+..+++.+.+.+.++...+..+..... ...++.. + .. ...++. .+.+|++|.. +|-.+++ .|
T Consensus 188 F~Ye~~al~~ll~~~~~~~~pv~lLvp~Gr~~~~v~~~l~~~~~~~g~~~~~g~L~~~~LPf~~Q~~yD~LLW~cD~-Nf 266 (371)
T TIGR03837 188 FCYENAALPALLDALAQSGSPVHLLVPEGRALAAVAAWLGDALLAAGDVHRRGALTVAVLPFVPQDDYDRLLWACDL-NF 266 (371)
T ss_pred EecCChhHHHHHHHHHhCCCCeEEEecCCccHHHHHHHhCccccCCccccccCceEEEEcCCCChhhHHHHHHhChh-cE
Confidence 3445677888999998888887766654422110 0011100 0 00 012333 3568999885 8888887 34
Q ss_pred EecCCchhHHHHHhcCCCeeecccccchhHHHH
Q 022811 185 LTHGGWNSILESVCGGVPIICWPFFAEQQTNCR 217 (291)
Q Consensus 185 ItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~ 217 (291)
|- |--|...|..+|+|+|==.+ =|.++|.
T Consensus 267 VR--GEDSFVRAqWAgkPfvWhIY--PQeddaH 295 (371)
T TIGR03837 267 VR--GEDSFVRAQWAGKPFVWHIY--PQEEDAH 295 (371)
T ss_pred ee--chhHHHHHHHcCCCceeecc--cCchhhH
Confidence 43 67899999999999985433 2444443
No 235
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase. Members of this protein family are sulfoacetaldehyde acetyltransferase, an enzyme of taurine utilization. Taurine, or 2-aminoethanesulfonate, can be used by bacteria as a source of carbon, nitrogen, and sulfur.
Probab=23.48 E-value=4.7e+02 Score=25.76 Aligned_cols=27 Identities=15% Similarity=0.285 Sum_probs=21.9
Q ss_pred cceEEecCCch------hHHHHHhcCCCeeecc
Q 022811 181 VSVFLTHGGWN------SILESVCGGVPIICWP 207 (291)
Q Consensus 181 v~~fItHgG~~------S~~Eal~~GvP~i~~P 207 (291)
.+++++|.|-| .+.+|...++|+|++.
T Consensus 65 ~gv~~~t~GPG~~N~~~gla~A~~~~~Pvl~I~ 97 (579)
T TIGR03457 65 MSMVIGQNGPGVTNCVTAIAAAYWAHTPVVIVT 97 (579)
T ss_pred CEEEEECCCchHHHHHHHHHHHhhcCCCEEEEe
Confidence 34488888854 6789999999999995
No 236
>TIGR01358 DAHP_synth_II 3-deoxy-7-phosphoheptulonate synthase, class II. Homologs scoring between trusted and noise cutoff include proteins involved in antibiotic biosynthesis; one example is active as this enzyme, while another acts on an amino analog.
Probab=23.37 E-value=3.7e+02 Score=25.73 Aligned_cols=48 Identities=17% Similarity=0.471 Sum_probs=30.9
Q ss_pred hHhhhccC-CCCceEEEE-cCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCC
Q 022811 94 CLKWLNEK-EPNSVAYVN-YGSITVMTDEQMKEFAWGLANSGHPFLWIVRPD 143 (291)
Q Consensus 94 ~~~wl~~~-~~~~vvyvs-~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~ 143 (291)
+.+-|+.. .+..+.+|+ ||... -.+.+..++++.++.|.+|+|...+-
T Consensus 298 L~~~LnP~~epGRlTLI~RmGa~k--V~~~LP~li~aV~~~G~~VvW~cDPM 347 (443)
T TIGR01358 298 LIERLNPENEPGRLTLISRMGADK--IADKLPPLLRAVKAAGRRVVWVCDPM 347 (443)
T ss_pred HHHHhCCCCCCceEEEEeccCchH--HHHhHHHHHHHHHHcCCceEEeecCC
Confidence 33445533 234455554 55432 23567889999999999999998753
No 237
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=22.95 E-value=4.5e+02 Score=25.95 Aligned_cols=27 Identities=7% Similarity=0.247 Sum_probs=22.0
Q ss_pred cceEEecCCc------hhHHHHHhcCCCeeecc
Q 022811 181 VSVFLTHGGW------NSILESVCGGVPIICWP 207 (291)
Q Consensus 181 v~~fItHgG~------~S~~Eal~~GvP~i~~P 207 (291)
.+++++|.|- +.+.+|...++|||++-
T Consensus 69 ~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 69 MGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 4458888884 47789999999999995
No 238
>PF11740 KfrA_N: Plasmid replication region DNA-binding N-term; InterPro: IPR021104 The KfrA family of protiens are encoded on plasmids, generally in or near gene clusters invloved in stable inheritance functions. These proteins are thought to form an all-helical structure, consisting of an N-terminal helix-turn-helix DNA binding domain and an extended coiled-coil tail. The best-characterised KfrA protein, encoded on the broad host-range Plasmid RK2, is a site-specific DNA-binding protein whose operator overlaps its own promoter. The DNA-binding domain is essential for function, while the coiled-coil domain is probably responsible for formation of multimers, and may provide an example of a bridge to host structures required for plasmid partitioning []. This entry represents the N-terminal DNA-binding domain.
Probab=22.88 E-value=1.6e+02 Score=22.05 Aligned_cols=14 Identities=21% Similarity=0.451 Sum_probs=7.2
Q ss_pred CHHHHHHHHHHHHc
Q 022811 234 SREDIAALVKEIME 247 (291)
Q Consensus 234 ~~~~l~~ai~~vl~ 247 (291)
|.+.+..+..+++.
T Consensus 2 T~e~V~~Aa~~L~~ 15 (120)
T PF11740_consen 2 TYEDVIEAADELLA 15 (120)
T ss_pred cHHHHHHHHHHHHH
Confidence 44555555555553
No 239
>PRK08322 acetolactate synthase; Reviewed
Probab=22.70 E-value=2.1e+02 Score=27.85 Aligned_cols=27 Identities=22% Similarity=0.378 Sum_probs=21.9
Q ss_pred cceEEecCCc------hhHHHHHhcCCCeeecc
Q 022811 181 VSVFLTHGGW------NSILESVCGGVPIICWP 207 (291)
Q Consensus 181 v~~fItHgG~------~S~~Eal~~GvP~i~~P 207 (291)
.+++++|.|- +.+.+|...++|+|++-
T Consensus 64 ~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 64 AGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 4448888774 47899999999999985
No 240
>PF05818 TraT: Enterobacterial TraT complement resistance protein; InterPro: IPR008874 The traT gene is one of the F factor transfer genes and encodes an outer membrane protein which is involved in interactions between Escherichia coli and its surroundings []. The protein plays a role in preventing unproductive conjugation between bacteria carrying like plasmids.; GO: 0046999 regulation of conjugation, 0019867 outer membrane
Probab=22.67 E-value=1.1e+02 Score=26.14 Aligned_cols=41 Identities=12% Similarity=0.157 Sum_probs=30.4
Q ss_pred hhcc-CCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEE
Q 022811 97 WLNE-KEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFL 137 (291)
Q Consensus 97 wl~~-~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~l 137 (291)
|||. .+..++|||.+=.....+...-..+...|...||+++
T Consensus 13 fLdPV~~~~rtVyv~vrNTSd~~~~l~~~i~~~L~~kGY~vv 54 (215)
T PF05818_consen 13 FLDPVAPSQRTVYVQVRNTSDKDINLESQIISALQAKGYQVV 54 (215)
T ss_pred EeCCCCcccceEEEEEecCCCCccchHHHHHHHHHHCCCEEe
Confidence 6775 3467799999877664444667778999999998864
No 241
>PRK08199 thiamine pyrophosphate protein; Validated
Probab=22.44 E-value=2.1e+02 Score=28.08 Aligned_cols=27 Identities=11% Similarity=0.234 Sum_probs=22.0
Q ss_pred cceEEecCCch------hHHHHHhcCCCeeecc
Q 022811 181 VSVFLTHGGWN------SILESVCGGVPIICWP 207 (291)
Q Consensus 181 v~~fItHgG~~------S~~Eal~~GvP~i~~P 207 (291)
.+++++|.|-| .+.+|...++|+|++-
T Consensus 72 ~gv~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i~ 104 (557)
T PRK08199 72 PGICFVTRGPGATNASIGVHTAFQDSTPMILFV 104 (557)
T ss_pred CEEEEeCCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 44588898844 7899999999999983
No 242
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated
Probab=22.32 E-value=2.1e+02 Score=28.11 Aligned_cols=27 Identities=22% Similarity=0.391 Sum_probs=21.6
Q ss_pred ceEEecCCc------hhHHHHHhcCCCeeeccc
Q 022811 182 SVFLTHGGW------NSILESVCGGVPIICWPF 208 (291)
Q Consensus 182 ~~fItHgG~------~S~~Eal~~GvP~i~~P~ 208 (291)
+++++|.|- +.+.||-+.++|||++.-
T Consensus 74 ~v~~vt~GpG~~N~l~~i~~A~~~~~Pvl~IsG 106 (568)
T PRK07449 74 VAVIVTSGTAVANLYPAVIEAGLTGVPLIVLTA 106 (568)
T ss_pred EEEEECCccHHHhhhHHHHHHhhcCCcEEEEEC
Confidence 347788774 478999999999999953
No 243
>PRK06932 glycerate dehydrogenase; Provisional
Probab=22.30 E-value=2.2e+02 Score=25.73 Aligned_cols=62 Identities=13% Similarity=0.175 Sum_probs=35.9
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcc
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVS 182 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~ 182 (291)
.+.+..|.+|+++ +++++.++..|.+++.. ... .... ....+.+-.++|+.+++
T Consensus 147 gktvgIiG~G~IG-------~~va~~l~~fg~~V~~~-~~~--------~~~~---------~~~~~~~l~ell~~sDi- 200 (314)
T PRK06932 147 GSTLGVFGKGCLG-------TEVGRLAQALGMKVLYA-EHK--------GASV---------CREGYTPFEEVLKQADI- 200 (314)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhcCCCEEEEE-CCC--------cccc---------cccccCCHHHHHHhCCE-
Confidence 3567788888876 44555556667776543 211 0000 01124556678989988
Q ss_pred eEEecCCch
Q 022811 183 VFLTHGGWN 191 (291)
Q Consensus 183 ~fItHgG~~ 191 (291)
++.|+-.+
T Consensus 201 -v~l~~Plt 208 (314)
T PRK06932 201 -VTLHCPLT 208 (314)
T ss_pred -EEEcCCCC
Confidence 77776543
No 244
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=22.08 E-value=86 Score=27.46 Aligned_cols=26 Identities=23% Similarity=0.372 Sum_probs=21.0
Q ss_pred eEEecCCchhHHHHHh----cCCCeeeccc
Q 022811 183 VFLTHGGWNSILESVC----GGVPIICWPF 208 (291)
Q Consensus 183 ~fItHgG~~S~~Eal~----~GvP~i~~P~ 208 (291)
++|+-||=||++.+.. .++|++++-.
T Consensus 28 lvi~iGGDGTlL~a~~~~~~~~~PvlGIN~ 57 (246)
T PRK04761 28 VIVALGGDGFMLQTLHRYMNSGKPVYGMNR 57 (246)
T ss_pred EEEEECCCHHHHHHHHHhcCCCCeEEEEeC
Confidence 3999999999998864 3678888754
No 245
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=22.01 E-value=1.7e+02 Score=20.49 Aligned_cols=40 Identities=23% Similarity=0.314 Sum_probs=30.0
Q ss_pred hhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEE
Q 022811 96 KWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFL 137 (291)
Q Consensus 96 ~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~l 137 (291)
.|....+.+.+|+++-|-.. ....+..+++.|.+.++.++
T Consensus 8 ~w~p~~~~k~~v~i~HG~~e--h~~ry~~~a~~L~~~G~~V~ 47 (79)
T PF12146_consen 8 RWKPENPPKAVVVIVHGFGE--HSGRYAHLAEFLAEQGYAVF 47 (79)
T ss_pred EecCCCCCCEEEEEeCCcHH--HHHHHHHHHHHHHhCCCEEE
Confidence 46665556889999988753 23468889999999888765
No 246
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=21.46 E-value=2e+02 Score=25.50 Aligned_cols=54 Identities=22% Similarity=0.475 Sum_probs=37.4
Q ss_pred CCCcceEEecCCchhHHHHHh-cCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 178 HPSVSVFLTHGGWNSILESVC-GGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 178 h~~v~~fItHgG~~S~~Eal~-~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.+++ +|+=||-||++.+.. ...|++++-.. .+|-.- .++.+++.+++.++++++
T Consensus 52 ~~D~--vi~lGGDGT~L~a~~~~~~PilGIN~G--------------~lGFL~--~~~~~~~~~~l~~i~~g~ 106 (271)
T PRK01185 52 NADV--IITIGGDGTILRTLQRAKGPILGINMG--------------GLGFLT--EIEIDEVGSAIKKLIRGE 106 (271)
T ss_pred CCCE--EEEEcCcHHHHHHHHHcCCCEEEEECC--------------CCccCc--ccCHHHHHHHHHHHHcCC
Confidence 3454 999999999999886 34577666320 122222 467888899999988754
No 247
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=21.38 E-value=2.2e+02 Score=28.25 Aligned_cols=53 Identities=26% Similarity=0.518 Sum_probs=37.8
Q ss_pred cceEEecCCchhHHHHHh----cCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 181 VSVFLTHGGWNSILESVC----GGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 181 v~~fItHgG~~S~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
+.++|+-||=||++.+.. .++|++++-+. .+|-.- .++.+++.+++.++++++
T Consensus 349 ~dlvi~lGGDGT~L~aa~~~~~~~~PilGin~G--------------~lGFL~--~~~~~~~~~~l~~~~~g~ 405 (569)
T PRK14076 349 ISHIISIGGDGTVLRASKLVNGEEIPIICINMG--------------TVGFLT--EFSKEEIFKAIDSIISGE 405 (569)
T ss_pred CCEEEEECCcHHHHHHHHHhcCCCCCEEEEcCC--------------CCCcCc--ccCHHHHHHHHHHHHcCC
Confidence 345999999999999865 37788887431 122221 467788888998888754
No 248
>PRK05114 hypothetical protein; Provisional
Probab=20.97 E-value=2.3e+02 Score=18.80 Aligned_cols=16 Identities=19% Similarity=0.086 Sum_probs=7.1
Q ss_pred CCChHHHHHHHHHHHH
Q 022811 272 GGASFNNFNKCIKEVL 287 (291)
Q Consensus 272 gg~s~~~~~~~v~~l~ 287 (291)
|=||-.+|.-..++|+
T Consensus 27 GmSsgEAI~~VA~eiR 42 (59)
T PRK05114 27 GMSSGEAIALVAEELR 42 (59)
T ss_pred cccHHHHHHHHHHHHH
Confidence 3344444444444444
No 249
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=20.79 E-value=2.7e+02 Score=24.66 Aligned_cols=52 Identities=15% Similarity=0.248 Sum_probs=34.7
Q ss_pred eEEecCCchhHHHHHhc-----CCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 183 VFLTHGGWNSILESVCG-----GVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 183 ~fItHgG~~S~~Eal~~-----GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
++|+=||-||++.++.. .+|++++-..+ .+|-. ..++.+++.+++.++++++
T Consensus 42 ~vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~G-------------~lGFL--~~~~~~~~~~~l~~i~~g~ 98 (264)
T PRK03501 42 IIVSIGGDGTFLQAVRKTGFREDCLYAGISTKD-------------QLGFY--CDFHIDDLDKMIQAITKEE 98 (264)
T ss_pred EEEEECCcHHHHHHHHHhcccCCCeEEeEecCC-------------CCeEc--ccCCHHHHHHHHHHHHcCC
Confidence 39999999999999863 45666654300 12222 2467788888888887654
No 250
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed
Probab=20.72 E-value=7.9e+02 Score=23.92 Aligned_cols=59 Identities=10% Similarity=0.177 Sum_probs=32.6
Q ss_pred EEecCCchhHHHH--HhcCCCeeecccccchhHHHHHHHHHhCc-ceeeCCCCCHHHHHHHHHHHHc
Q 022811 184 FLTHGGWNSILES--VCGGVPIICWPFFAEQQTNCRYASTTWGI-GMEVNRDASREDIAALVKEIME 247 (291)
Q Consensus 184 fItHgG~~S~~Ea--l~~GvP~i~~P~~~DQ~~na~~v~~~~G~-G~~l~~~~~~~~l~~ai~~vl~ 247 (291)
++..+|++.+... ..++.+.... .+.+..+.+... +.+|+ |.++ -+.++|..++++.+.
T Consensus 452 V~NN~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~la-~a~G~~~~~v---~~~~el~~al~~a~~ 513 (548)
T PRK08978 452 LLDNQRLGMVRQWQQLFFDERYSET-DLSDNPDFVMLA-SAFGIPGQTI---TRKDQVEAALDTLLN 513 (548)
T ss_pred EEeCCccHHHHHHHHHHhCCcceec-CCCCCCCHHHHH-HHCCCeEEEE---CCHHHHHHHHHHHHh
Confidence 7788888866422 2223222111 011335556555 65654 3333 468899999998874
No 251
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated
Probab=20.59 E-value=8.2e+02 Score=24.04 Aligned_cols=59 Identities=7% Similarity=0.098 Sum_probs=33.1
Q ss_pred EEecCCchhHHHH--HhcCCCeeecccccchhHHHHHHHHHhCc-ceeeCCCCCHHHHHHHHHHHHc
Q 022811 184 FLTHGGWNSILES--VCGGVPIICWPFFAEQQTNCRYASTTWGI-GMEVNRDASREDIAALVKEIME 247 (291)
Q Consensus 184 fItHgG~~S~~Ea--l~~GvP~i~~P~~~DQ~~na~~v~~~~G~-G~~l~~~~~~~~l~~ai~~vl~ 247 (291)
++..+|++.+... ..++-+.... .+....+.++.. +.+|+ |.++ -+.++|..++++.+.
T Consensus 472 V~NN~~y~~i~~~q~~~~~~~~~~~-~~~~~~d~~~~A-~a~G~~~~~v---~~~~eL~~al~~a~~ 533 (572)
T PRK08979 472 NLNNRFLGMVKQWQDMIYQGRHSHS-YMDSVPDFAKIA-EAYGHVGIRI---SDPDELESGLEKALA 533 (572)
T ss_pred EEeCCccHHHHHHHHHHhCCccccc-CCCCCCCHHHHH-HHCCCeEEEE---CCHHHHHHHHHHHHh
Confidence 7788888876532 2223222111 111124456554 66664 4444 368899999998875
No 252
>TIGR02483 PFK_mixed phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal.
Probab=20.36 E-value=92 Score=28.47 Aligned_cols=37 Identities=16% Similarity=0.263 Sum_probs=29.5
Q ss_pred ccCCCCcceEEecCCchhHHHHHh---cCCCeeecccccc
Q 022811 175 VLSHPSVSVFLTHGGWNSILESVC---GGVPIICWPFFAE 211 (291)
Q Consensus 175 iL~h~~v~~fItHgG~~S~~Eal~---~GvP~i~~P~~~D 211 (291)
.|..-++..+|.=||-+|+.-|.. .|+|+|++|-.-|
T Consensus 89 ~l~~~~Id~LivIGGdgS~~~a~~L~~~gi~vigiPkTID 128 (324)
T TIGR02483 89 NLKELGLDALIAIGGDGTLGIARRLADKGLPVVGVPKTID 128 (324)
T ss_pred HHHHcCCCEEEEECCchHHHHHHHHHhcCCCEEeeccccC
Confidence 455667888999999999877744 6999999998644
No 253
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=20.30 E-value=6.4e+02 Score=23.24 Aligned_cols=100 Identities=20% Similarity=0.289 Sum_probs=54.0
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcc
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVS 182 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~ 182 (291)
.+.|..+.+|+++ ..+++-|...+..+....+.. ..++...+... .++.-.+.+..+++
T Consensus 162 gK~vgilG~G~IG-------~~ia~rL~~Fg~~i~y~~r~~-------~~~~~~~~~~~------~~~d~~~~~~~sD~- 220 (336)
T KOG0069|consen 162 GKTVGILGLGRIG-------KAIAKRLKPFGCVILYHSRTQ-------LPPEEAYEYYA------EFVDIEELLANSDV- 220 (336)
T ss_pred CCEEEEecCcHHH-------HHHHHhhhhccceeeeecccC-------CchhhHHHhcc------cccCHHHHHhhCCE-
Confidence 4668888999987 445555555564444333322 11221111111 14455567777776
Q ss_pred eEEecCCchhHHHHHhcCCCeeecccccc--hhHHHHHHHHHhCcceeeCC-----CCCHHHHHHHHH
Q 022811 183 VFLTHGGWNSILESVCGGVPIICWPFFAE--QQTNCRYASTTWGIGMEVNR-----DASREDIAALVK 243 (291)
Q Consensus 183 ~fItHgG~~S~~Eal~~GvP~i~~P~~~D--Q~~na~~v~~~~G~G~~l~~-----~~~~~~l~~ai~ 243 (291)
+|-|| |+..+ .-.|...+ +.++-|..+-. -++.+.+.++++
T Consensus 221 -ivv~~------------------pLt~~T~~liNk~~~-~~mk~g~vlVN~aRG~iide~~l~eaL~ 268 (336)
T KOG0069|consen 221 -IVVNC------------------PLTKETRHLINKKFI-EKMKDGAVLVNTARGAIIDEEALVEALK 268 (336)
T ss_pred -EEEec------------------CCCHHHHHHhhHHHH-HhcCCCeEEEeccccccccHHHHHHHHh
Confidence 55554 54332 33477777 56777766531 466666666664
No 254
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=20.23 E-value=3.5e+02 Score=22.23 Aligned_cols=76 Identities=12% Similarity=0.171 Sum_probs=46.2
Q ss_pred HHHHHHHhhh--cCccEEEEcCcccccHHHHHHHHhcCCCeEEEccccccCCCCCccccccccCCCCCCChhhHhhhccC
Q 022811 24 NYMKTEVQNC--LESSAIIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEK 101 (291)
Q Consensus 24 ~~~~~~~~~~--~~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~ 101 (291)
+++.+.++.. ......|+=+-++.-....+.++...|++..+|- +..-.. .+++++.+.+...
T Consensus 35 dl~~~l~~~~~~~~~~vfllG~~~~v~~~~~~~l~~~yP~l~i~g~-~g~f~~--------------~~~~~i~~~I~~s 99 (177)
T TIGR00696 35 DLMEELCQRAGKEKLPIFLYGGKPDVLQQLKVKLIKEYPKLKIVGA-FGPLEP--------------EERKAALAKIARS 99 (177)
T ss_pred HHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCCEEEEE-CCCCCh--------------HHHHHHHHHHHHc
Confidence 3444444443 2346788888776655667777777888887874 221110 0234566666654
Q ss_pred CCCceEEEEcCCcc
Q 022811 102 EPNSVAYVNYGSIT 115 (291)
Q Consensus 102 ~~~~vvyvs~GS~~ 115 (291)
. ..+|+|++|+--
T Consensus 100 ~-~dil~VglG~Pk 112 (177)
T TIGR00696 100 G-AGIVFVGLGCPK 112 (177)
T ss_pred C-CCEEEEEcCCcH
Confidence 3 459999999864
No 255
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=20.18 E-value=92 Score=28.39 Aligned_cols=37 Identities=19% Similarity=0.312 Sum_probs=29.8
Q ss_pred ccCCCCcceEEecCCchhHHHHHh---cCCCeeecccccc
Q 022811 175 VLSHPSVSVFLTHGGWNSILESVC---GGVPIICWPFFAE 211 (291)
Q Consensus 175 iL~h~~v~~fItHgG~~S~~Eal~---~GvP~i~~P~~~D 211 (291)
.|..-.+..+|.=||-+|+.-|.. +|+|+|++|-.-|
T Consensus 87 ~l~~~~Id~Li~IGGdgs~~~a~~L~e~~i~vigiPkTID 126 (317)
T cd00763 87 QLKKHGIDALVVIGGDGSYMGAMRLTEHGFPCVGLPGTID 126 (317)
T ss_pred HHHHcCCCEEEEECCchHHHHHHHHHHcCCCEEEeccccc
Confidence 456678888999999999877744 5999999998544
No 256
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=20.08 E-value=95 Score=27.65 Aligned_cols=51 Identities=22% Similarity=0.365 Sum_probs=33.8
Q ss_pred eEEecCCchhHHHHH---hcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 183 VFLTHGGWNSILESV---CGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 183 ~fItHgG~~S~~Eal---~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.+|+-||-||+++++ ..++|++++|... .|-. ..++.+++.+++.++++++
T Consensus 60 ~vi~iGGDGTlL~a~~~~~~~~pi~gIn~G~--------------lGFl--~~~~~~~~~~~l~~i~~g~ 113 (277)
T PRK03708 60 FIIAIGGDGTILRIEHKTKKDIPILGINMGT--------------LGFL--TEVEPEETFFALSRLLEGD 113 (277)
T ss_pred EEEEEeCcHHHHHHHHhcCCCCeEEEEeCCC--------------CCcc--ccCCHHHHHHHHHHHHcCC
Confidence 499999999999987 3456888887521 0111 1345666777777776543
No 257
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase. Members of this protein family are sulfoacetaldehyde acetyltransferase, an enzyme of taurine utilization. Taurine, or 2-aminoethanesulfonate, can be used by bacteria as a source of carbon, nitrogen, and sulfur.
Probab=20.06 E-value=8.3e+02 Score=24.00 Aligned_cols=58 Identities=16% Similarity=0.185 Sum_probs=31.0
Q ss_pred EEecCCchhHHHH--HhcCCCeeecccccch-hHHHHHHHHHhCc-ceeeCCCCCHHHHHHHHHHHHc
Q 022811 184 FLTHGGWNSILES--VCGGVPIICWPFFAEQ-QTNCRYASTTWGI-GMEVNRDASREDIAALVKEIME 247 (291)
Q Consensus 184 fItHgG~~S~~Ea--l~~GvP~i~~P~~~DQ-~~na~~v~~~~G~-G~~l~~~~~~~~l~~ai~~vl~ 247 (291)
++..+|+|.+... ..++-+.... ..+. .+.++.. +.+|+ |.++ -+.++|..++++.+.
T Consensus 481 V~NN~~yg~i~~~~~~~~~~~~~~~--~~~~~~d~~~lA-~a~G~~g~~v---~~~~el~~al~~a~~ 542 (579)
T TIGR03457 481 VFRNRQWGAEKKNQVDFYNNRFVGT--ELESELSFAGIA-DAMGAKGVVV---DKPEDVGPALKKAIA 542 (579)
T ss_pred EEECcchHHHHHHHHHhhCCcceec--cCCCCCCHHHHH-HHCCCeEEEE---CCHHHHHHHHHHHHh
Confidence 7788888865422 2222221111 1112 2455544 55553 3333 468889999988875
Done!