Query 022811
Match_columns 291
No_of_seqs 235 out of 1650
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 11:31:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022811.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022811hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.2E-57 7.4E-62 428.4 25.1 271 1-287 182-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 4.2E-53 1.4E-57 403.4 27.5 288 2-289 192-480 (482)
3 2c1x_A UDP-glucose flavonoid 3 100.0 3.4E-52 1.2E-56 394.4 25.3 274 2-290 180-454 (456)
4 2vch_A Hydroquinone glucosyltr 100.0 5.2E-50 1.8E-54 381.8 29.8 276 1-288 174-469 (480)
5 2acv_A Triterpene UDP-glucosyl 100.0 2.4E-48 8.4E-53 368.7 22.6 268 2-287 181-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 3.4E-30 1.2E-34 240.5 18.9 211 35-287 209-420 (424)
7 1iir_A Glycosyltransferase GTF 100.0 1.9E-29 6.4E-34 235.2 15.5 206 38-288 193-400 (415)
8 1rrv_A Glycosyltransferase GTF 100.0 3.4E-29 1.2E-33 233.5 13.7 206 38-288 193-401 (416)
9 4amg_A Snogd; transferase, pol 100.0 3.2E-29 1.1E-33 231.4 11.6 170 93-286 226-398 (400)
10 2o6l_A UDP-glucuronosyltransfe 100.0 6.3E-28 2.1E-32 198.0 16.3 161 90-266 7-169 (170)
11 2p6p_A Glycosyl transferase; X 99.9 2.4E-27 8.2E-32 218.1 16.0 177 94-291 200-382 (384)
12 3h4t_A Glycosyltransferase GTF 99.9 1E-26 3.4E-31 216.3 16.8 190 37-265 175-365 (404)
13 3rsc_A CALG2; TDP, enediyne, s 99.9 2.3E-25 8E-30 206.7 19.0 208 37-287 203-412 (415)
14 2iyf_A OLED, oleandomycin glyc 99.9 2.7E-25 9.2E-30 207.4 17.0 196 35-267 185-383 (430)
15 3ia7_A CALG4; glycosysltransfe 99.9 1.8E-24 6.3E-29 199.2 18.2 208 37-287 187-397 (402)
16 2yjn_A ERYCIII, glycosyltransf 99.9 8.5E-25 2.9E-29 205.3 12.6 177 92-288 255-435 (441)
17 4fzr_A SSFS6; structural genom 99.9 1.2E-22 4.1E-27 187.7 9.9 161 92-267 215-384 (398)
18 3oti_A CALG3; calicheamicin, T 99.9 1.1E-21 3.7E-26 181.4 12.3 171 93-287 221-396 (398)
19 3tsa_A SPNG, NDP-rhamnosyltran 99.8 1.2E-20 4.1E-25 173.6 16.0 174 93-287 207-387 (391)
20 3otg_A CALG1; calicheamicin, T 99.8 1E-18 3.6E-23 161.4 23.3 172 96-286 233-406 (412)
21 3s2u_A UDP-N-acetylglucosamine 99.7 1.7E-16 5.8E-21 145.6 12.3 169 102-288 178-356 (365)
22 2jzc_A UDP-N-acetylglucosamine 99.6 6E-16 2.1E-20 132.1 9.0 136 97-245 21-196 (224)
23 1f0k_A MURG, UDP-N-acetylgluco 99.3 1.1E-11 3.7E-16 112.2 12.5 135 103-249 182-324 (364)
24 3hbm_A UDP-sugar hydrolase; PS 99.1 5.6E-10 1.9E-14 98.5 11.1 114 104-230 157-273 (282)
25 2f9f_A First mannosyl transfer 98.6 3.2E-07 1.1E-11 74.6 10.4 132 106-249 24-163 (177)
26 1vgv_A UDP-N-acetylglucosamine 98.5 7.6E-08 2.6E-12 87.3 5.2 130 103-249 204-343 (384)
27 1v4v_A UDP-N-acetylglucosamine 98.3 2.8E-06 9.6E-11 76.8 9.7 129 103-249 197-335 (376)
28 3dzc_A UDP-N-acetylglucosamine 98.1 1.1E-05 3.8E-10 74.2 10.2 130 103-249 229-368 (396)
29 2vsy_A XCC0866; transferase, g 98.1 0.00018 6.1E-09 68.6 18.5 83 162-249 434-523 (568)
30 3ot5_A UDP-N-acetylglucosamine 98.1 5.7E-06 1.9E-10 76.4 7.6 130 103-249 223-362 (403)
31 3okp_A GDP-mannose-dependent a 98.1 3.1E-05 1E-09 69.9 12.2 143 104-260 197-357 (394)
32 2iw1_A Lipopolysaccharide core 98.0 6.3E-05 2.1E-09 67.4 13.4 144 104-261 195-351 (374)
33 3beo_A UDP-N-acetylglucosamine 98.0 1.1E-05 3.6E-10 72.7 8.3 130 103-249 204-343 (375)
34 2jjm_A Glycosyl transferase, g 98.0 0.00027 9.4E-09 64.0 17.7 93 161-261 266-364 (394)
35 4gyw_A UDP-N-acetylglucosamine 98.0 0.00014 4.7E-09 72.1 16.8 142 102-249 520-669 (723)
36 3c48_A Predicted glycosyltrans 98.0 0.00014 4.9E-09 66.7 14.3 96 161-264 305-408 (438)
37 2gek_A Phosphatidylinositol ma 97.9 0.0003 1E-08 63.6 14.9 127 106-249 209-350 (406)
38 2x6q_A Trehalose-synthase TRET 97.8 0.00035 1.2E-08 63.7 14.4 79 161-249 292-380 (416)
39 3q3e_A HMW1C-like glycosyltran 97.8 0.00027 9.3E-09 68.2 13.9 139 105-249 441-589 (631)
40 3qhp_A Type 1 capsular polysac 97.8 0.00012 4E-09 58.0 9.3 141 105-262 2-155 (166)
41 2iuy_A Avigt4, glycosyltransfe 97.7 0.00016 5.5E-09 64.2 10.7 127 107-247 164-307 (342)
42 3fro_A GLGA glycogen synthase; 97.7 0.0006 2.1E-08 62.1 14.8 145 106-262 252-411 (439)
43 2bfw_A GLGA glycogen synthase; 97.7 0.00093 3.2E-08 54.4 13.4 78 163-249 96-182 (200)
44 4hwg_A UDP-N-acetylglucosamine 97.6 5.6E-05 1.9E-09 69.3 6.0 128 104-249 203-343 (385)
45 3oy2_A Glycosyltransferase B73 97.5 0.0016 5.6E-08 59.1 14.1 76 164-249 256-356 (413)
46 2r60_A Glycosyl transferase, g 97.4 0.00097 3.3E-08 62.5 11.5 92 161-260 334-437 (499)
47 2xci_A KDO-transferase, 3-deox 97.3 0.00052 1.8E-08 62.4 7.4 96 163-265 261-363 (374)
48 3rhz_A GTF3, nucleotide sugar 97.2 0.00039 1.3E-08 62.6 5.7 110 163-285 215-336 (339)
49 1rzu_A Glycogen synthase 1; gl 97.0 0.014 4.8E-07 54.2 14.1 133 106-249 292-444 (485)
50 2qzs_A Glycogen synthase; glyc 96.8 0.017 6E-07 53.5 13.1 134 105-249 292-445 (485)
51 3s28_A Sucrose synthase 1; gly 96.2 0.047 1.6E-06 54.6 13.0 81 161-249 639-735 (816)
52 2hy7_A Glucuronosyltransferase 94.4 0.046 1.6E-06 49.9 5.4 75 161-249 264-353 (406)
53 3vue_A GBSS-I, granule-bound s 94.2 0.36 1.2E-05 45.8 11.4 131 107-247 329-476 (536)
54 2x0d_A WSAF; GT4 family, trans 93.3 0.022 7.4E-07 52.4 1.0 79 162-249 295-380 (413)
55 3tov_A Glycosyl transferase fa 90.9 0.39 1.3E-05 42.8 6.3 96 103-206 184-286 (349)
56 1psw_A ADP-heptose LPS heptosy 88.9 2 6.8E-05 37.5 9.3 96 103-206 179-286 (348)
57 2gt1_A Lipopolysaccharide hept 88.4 0.59 2E-05 40.8 5.5 131 103-249 177-323 (326)
58 3nb0_A Glycogen [starch] synth 81.6 2.9 9.8E-05 40.9 6.9 73 168-246 499-592 (725)
59 3t5t_A Putative glycosyltransf 81.5 6.1 0.00021 37.0 9.0 109 163-288 353-472 (496)
60 2iz6_A Molybdenum cofactor car 79.3 22 0.00075 28.2 12.2 132 93-247 36-173 (176)
61 1uqt_A Alpha, alpha-trehalose- 71.4 21 0.00071 33.1 9.6 75 164-249 333-420 (482)
62 3s2u_A UDP-N-acetylglucosamine 63.5 12 0.0004 33.1 6.0 37 104-142 3-39 (365)
63 1u11_A PURE (N5-carboxyaminoim 60.6 62 0.0021 25.8 9.2 143 104-272 21-176 (182)
64 2i2c_A Probable inorganic poly 56.4 11 0.00037 32.1 4.3 52 182-249 37-94 (272)
65 4b4k_A N5-carboxyaminoimidazol 51.5 90 0.0031 24.8 13.7 143 104-271 22-176 (181)
66 1qkk_A DCTD, C4-dicarboxylate 51.4 48 0.0017 24.3 7.0 50 198-249 73-122 (155)
67 2pju_A Propionate catabolism o 49.2 24 0.00083 29.1 5.2 28 181-209 64-91 (225)
68 2lnd_A De novo designed protei 49.0 33 0.0011 23.5 4.8 50 198-247 49-100 (112)
69 3tl4_X Glutaminyl-tRNA synthet 44.3 36 0.0012 27.3 5.3 64 214-283 103-174 (187)
70 2q5c_A NTRC family transcripti 41.2 18 0.00061 29.1 3.1 31 179-210 50-80 (196)
71 1u0t_A Inorganic polyphosphate 39.4 42 0.0014 28.9 5.4 31 176-208 73-107 (307)
72 1rcu_A Conserved hypothetical 37.3 1.4E+02 0.0048 23.9 7.9 95 93-208 49-150 (195)
73 1xmp_A PURE, phosphoribosylami 37.0 1.5E+02 0.0052 23.3 12.8 144 104-272 11-166 (170)
74 1o4v_A Phosphoribosylaminoimid 36.7 1.6E+02 0.0055 23.4 12.2 141 104-270 13-164 (183)
75 3euw_A MYO-inositol dehydrogen 36.5 1.6E+02 0.0054 25.2 8.8 124 105-247 6-139 (344)
76 3lp6_A Phosphoribosylaminoimid 35.7 1.6E+02 0.0055 23.2 9.8 141 104-269 7-157 (174)
77 3e9m_A Oxidoreductase, GFO/IDH 35.4 1.5E+02 0.0053 25.2 8.5 125 105-247 7-141 (330)
78 2a33_A Hypothetical protein; s 35.0 89 0.003 25.5 6.4 100 93-208 36-147 (215)
79 2jk1_A HUPR, hydrogenase trans 32.1 1.3E+02 0.0043 21.3 6.5 48 199-247 71-118 (139)
80 3q2i_A Dehydrogenase; rossmann 31.5 1.5E+02 0.005 25.6 7.8 126 104-248 14-150 (354)
81 3qjg_A Epidermin biosynthesis 30.4 2E+02 0.0067 22.6 8.8 113 104-225 6-141 (175)
82 4grd_A N5-CAIR mutase, phospho 30.1 2E+02 0.0069 22.6 11.4 141 103-270 11-165 (173)
83 3m2t_A Probable dehydrogenase; 30.0 1.5E+02 0.0051 25.7 7.6 110 105-229 7-124 (359)
84 2gkg_A Response regulator homo 29.9 1E+02 0.0034 21.1 5.4 47 199-248 79-125 (127)
85 1q1v_A DEK protein; winged-hel 28.9 1.3E+02 0.0043 19.9 5.5 58 232-291 11-70 (70)
86 1ydh_A AT5G11950; structural g 28.9 38 0.0013 27.8 3.1 103 93-214 32-151 (216)
87 1yt5_A Inorganic polyphosphate 28.4 30 0.001 29.1 2.4 54 178-249 41-97 (258)
88 3ors_A N5-carboxyaminoimidazol 28.1 2.1E+02 0.0073 22.2 12.0 139 105-269 4-155 (163)
89 3gl9_A Response regulator; bet 27.4 1.3E+02 0.0045 20.8 5.7 47 199-247 75-121 (122)
90 3oow_A Phosphoribosylaminoimid 27.1 2.2E+02 0.0077 22.2 12.5 142 105-272 6-160 (166)
91 3l7i_A Teichoic acid biosynthe 27.1 31 0.0011 33.6 2.6 109 168-287 605-719 (729)
92 3kcn_A Adenylate cyclase homol 26.8 1.5E+02 0.005 21.4 6.1 49 198-248 74-123 (151)
93 3ia7_A CALG4; glycosysltransfe 26.8 1.1E+02 0.0039 26.2 6.2 35 105-141 6-40 (402)
94 3s40_A Diacylglycerol kinase; 26.6 1.7E+02 0.0057 24.9 7.1 26 183-208 66-97 (304)
95 3rzi_A Probable 3-deoxy-D-arab 26.4 2.3E+02 0.008 25.8 8.0 48 94-143 319-368 (462)
96 4fb5_A Probable oxidoreductase 26.1 2.9E+02 0.01 23.7 8.8 105 97-210 19-129 (393)
97 2xvy_A Chelatase, putative; me 25.7 83 0.0029 26.2 4.9 40 103-142 9-50 (269)
98 2h31_A Multifunctional protein 25.6 3.8E+02 0.013 24.3 11.8 85 103-209 264-353 (425)
99 2ofk_A 3-methyladenine DNA gly 25.1 56 0.0019 26.1 3.3 75 205-283 22-120 (183)
100 2an1_A Putative kinase; struct 25.0 40 0.0014 28.6 2.7 28 179-208 64-95 (292)
101 2jg6_A DNA-3-methyladenine gly 25.0 1.5E+02 0.0051 23.7 5.8 75 205-283 22-120 (186)
102 3h4t_A Glycosyltransferase GTF 24.8 3.4E+02 0.011 23.6 9.0 35 106-142 3-37 (404)
103 4hkt_A Inositol 2-dehydrogenas 24.1 2E+02 0.0067 24.5 7.1 123 105-247 5-137 (331)
104 2ca5_A MXIH; transport protein 23.4 1.7E+02 0.0057 20.1 5.0 53 235-291 27-83 (85)
105 3e18_A Oxidoreductase; dehydro 23.2 2.8E+02 0.0095 24.0 8.0 107 105-229 7-121 (359)
106 3db2_A Putative NADPH-dependen 22.9 1.4E+02 0.0048 25.7 6.0 124 105-247 7-140 (354)
107 3ip0_A 2-amino-4-hydroxy-6-hyd 22.7 86 0.0029 24.3 4.0 27 106-132 2-28 (158)
108 1v5e_A Pyruvate oxidase; oxido 22.5 1.7E+02 0.0059 27.5 6.9 27 181-207 69-101 (590)
109 3dfz_A SIRC, precorrin-2 dehyd 22.1 3.2E+02 0.011 22.2 9.1 150 97-267 26-185 (223)
110 2rjn_A Response regulator rece 21.9 38 0.0013 24.9 1.7 49 199-249 78-127 (154)
111 1t35_A Hypothetical protein YV 21.5 1.4E+02 0.0047 23.7 5.2 100 93-208 24-135 (191)
112 3t6k_A Response regulator rece 21.4 2E+02 0.0067 20.3 5.8 49 199-249 77-125 (136)
113 1eiw_A Hypothetical protein MT 20.9 1.4E+02 0.0048 21.5 4.6 65 176-247 36-109 (111)
114 1f9y_A HPPK, protein (6-hydrox 20.6 1E+02 0.0035 23.9 4.0 27 106-132 2-28 (158)
115 3evn_A Oxidoreductase, GFO/IDH 20.6 3E+02 0.01 23.3 7.6 76 170-247 57-141 (329)
116 3kxe_C Antitoxin protein PARD- 20.5 70 0.0024 22.2 2.7 49 235-289 31-79 (88)
117 2qx0_A 7,8-dihydro-6-hydroxyme 20.4 1.4E+02 0.0047 23.2 4.7 28 106-133 3-30 (159)
118 3lua_A Response regulator rece 20.3 1.5E+02 0.0053 20.8 4.9 50 198-249 79-128 (140)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.2e-57 Score=428.40 Aligned_cols=271 Identities=30% Similarity=0.554 Sum_probs=244.3
Q ss_pred CCCCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhcCCCeEEEccccccCCCCCcccc
Q 022811 1 MSNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLLCRHLPESEF 80 (291)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~ 80 (291)
+|+++.+|||++++. +..+.++.++.+..+.+.+++++|+|||++||+++++++++.+|++++|||++.......
T Consensus 182 ~p~~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~~vGPl~~~~~~~~---- 256 (454)
T 3hbf_A 182 FPELKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLLNVGPFNLTTPQRK---- 256 (454)
T ss_dssp SCCBCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEEECCCHHHHSCCSC----
T ss_pred CCCcChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCCCEEEECCccccccccc----
Confidence 478999999998875 555667888889899999999999999999999999999999899999999986532210
Q ss_pred ccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHh
Q 022811 81 KSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEI 160 (291)
Q Consensus 81 ~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~ 160 (291)
+.++.+|.+||+.+++++||||||||....+.+++.+++.+|++++++|||+++.. ....+|++|.++.
T Consensus 257 -------~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~----~~~~lp~~~~~~~ 325 (454)
T 3hbf_A 257 -------VSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD----PKEKLPKGFLERT 325 (454)
T ss_dssp -------CCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC----HHHHSCTTHHHHT
T ss_pred -------ccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc----chhcCCHhHHhhc
Confidence 12356799999998889999999999998889999999999999999999999864 2235788888888
Q ss_pred cCCeEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHH
Q 022811 161 KDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIA 239 (291)
Q Consensus 161 ~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~ 239 (291)
++|+++++|+||..+|+|+++++|||||||||++|++++|||||+||+++||+.||+++++.+|+|+.+.. .+++++|.
T Consensus 326 ~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~ 405 (454)
T 3hbf_A 326 KTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIK 405 (454)
T ss_dssp TTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHH
T ss_pred CCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999544799999986 79999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 022811 240 ALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVL 287 (291)
Q Consensus 240 ~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 287 (291)
++|+++|+++++++||+||+++++++++++++||||++++++||+++.
T Consensus 406 ~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 406 KALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 999999998778899999999999999999999999999999999885
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=4.2e-53 Score=403.36 Aligned_cols=288 Identities=52% Similarity=0.981 Sum_probs=238.5
Q ss_pred CCCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhcCCCeEEEcccccc-CCCCCcccc
Q 022811 2 SNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLL-CRHLPESEF 80 (291)
Q Consensus 2 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~-~~~~~~~~~ 80 (291)
|+++.++||.++...+..+.+..++.+..+.+.+++++|+||+++||+++++++++..|++++|||++.. .........
T Consensus 192 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~ 271 (482)
T 2pq6_A 192 KNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSSTIPSIYPIGPLPSLLKQTPQIHQL 271 (482)
T ss_dssp CSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHHHTTCTTEEECCCHHHHHHTSTTGGGG
T ss_pred CCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHHHHHhCCcEEEEcCCccccccccccccc
Confidence 4567778887776544445667777777788889999999999999999999999887899999999863 211000000
Q ss_pred ccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHh
Q 022811 81 KSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEI 160 (291)
Q Consensus 81 ~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~ 160 (291)
.....++|..+.+|.+||+.++++++|||||||....+.+++.+++.+|++.+++|||+++.+...+....+++++.++.
T Consensus 272 ~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 351 (482)
T 2pq6_A 272 DSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEI 351 (482)
T ss_dssp CC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHH
T ss_pred ccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhc
Confidence 00001234456679999999888999999999998888888999999999999999999985421111223788888888
Q ss_pred cCCeEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHH
Q 022811 161 KDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAA 240 (291)
Q Consensus 161 ~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ 240 (291)
++|+++++|+||.++|+|+++++|||||||||++|++++|||||++|+++||+.||+++++++|+|+.+...+++++|.+
T Consensus 352 ~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~ 431 (482)
T 2pq6_A 352 ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAK 431 (482)
T ss_dssp TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHH
T ss_pred CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999657899999987799999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 022811 241 LVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHY 289 (291)
Q Consensus 241 ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 289 (291)
+|+++|.|+++++||+||+++++.+++++++||||.+++++||++++..
T Consensus 432 ~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 432 LINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp HHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Confidence 9999999887778999999999999999999999999999999998654
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=3.4e-52 Score=394.41 Aligned_cols=274 Identities=30% Similarity=0.583 Sum_probs=233.1
Q ss_pred CCCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhcCCCeEEEccccccCCCCCccccc
Q 022811 2 SNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLLCRHLPESEFK 81 (291)
Q Consensus 2 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~ 81 (291)
|+++.+|+|.++......+.+..++.+..+.+.+++++|+||+++||+++++.+++..|++++|||++......
T Consensus 180 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~vGpl~~~~~~~------ 253 (456)
T 2c1x_A 180 SKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLNIGPFNLITPPP------ 253 (456)
T ss_dssp TTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCEEECCCHHHHC---------
T ss_pred CcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcCCCEEEecCcccCcccc------
Confidence 45677788875543333344556666666777889999999999999999999999888999999998643210
Q ss_pred cccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhc
Q 022811 82 SFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIK 161 (291)
Q Consensus 82 ~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~ 161 (291)
. +..+.+|.+||+.++++++|||||||....+.+++.+++.+|++.+++|+|+++.. ....+++++.++.+
T Consensus 254 ~-----~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~----~~~~l~~~~~~~~~ 324 (456)
T 2c1x_A 254 V-----VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK----ARVHLPEGFLEKTR 324 (456)
T ss_dssp -----------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG----GGGGSCTTHHHHHT
T ss_pred c-----ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc----chhhCCHHHHhhcC
Confidence 0 12345699999988889999999999988788999999999999999999999854 12246777877788
Q ss_pred CCeEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHH
Q 022811 162 DRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAA 240 (291)
Q Consensus 162 ~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ 240 (291)
+|+++++|+||.++|+|+++++|||||||||++||+++|||||++|++.||+.||+++++.||+|+.+.. .+++++|.+
T Consensus 325 ~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~ 404 (456)
T 2c1x_A 325 GYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMS 404 (456)
T ss_dssp TTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHH
T ss_pred CceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999655599999975 789999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcC
Q 022811 241 LVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHYH 290 (291)
Q Consensus 241 ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~~ 290 (291)
+|+++|+|+++++||+||+++++.+++++.+||||.+++++||+++.+.+
T Consensus 405 ~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~~~ 454 (456)
T 2c1x_A 405 CFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPK 454 (456)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHhcC
Confidence 99999998877899999999999999999999999999999999997655
No 4
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=5.2e-50 Score=381.75 Aligned_cols=276 Identities=34% Similarity=0.586 Sum_probs=229.7
Q ss_pred CCCCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhc---CCCeEEEccccccCCCCCc
Q 022811 1 MSNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASK---SPNIYTVGPLHLLCRHLPE 77 (291)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~---~p~v~~vGpl~~~~~~~~~ 77 (291)
+||++.+++|..+... ...++..+.+..+.+++++++++||+++||+++++.++.. .+++++|||++.......
T Consensus 174 ~~p~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~- 250 (480)
T 2vch_A 174 CVPVAGKDFLDPAQDR--KDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPVGPLVNIGKQEA- 250 (480)
T ss_dssp CCCBCGGGSCGGGSCT--TSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEEECCCCCCCSCSCC-
T ss_pred CCCCChHHCchhhhcC--CchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEEEEecccccccccc-
Confidence 3567778888766432 1235556666677788899999999999999998887641 368999999986421100
Q ss_pred cccccccCCCCCCChhhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCC-----------
Q 022811 78 SEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVT----------- 146 (291)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~----------- 146 (291)
.+..+.++.+||+.++++++|||||||....+.+++.+++.+|++++++|||+++.....
T Consensus 251 ---------~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~ 321 (480)
T 2vch_A 251 ---------KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQ 321 (480)
T ss_dssp --------------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--C
T ss_pred ---------CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccc
Confidence 011345799999998889999999999988889999999999999999999999864311
Q ss_pred Cc-cccccHHHHHHhcCCeEEee-ccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhC
Q 022811 147 GD-SAILSQEFYEEIKDRGMIAN-WCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWG 224 (291)
Q Consensus 147 ~~-~~~~~~~~~~~~~~~~~v~~-w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G 224 (291)
.. ...+|+++.++..++++++. |+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|
T Consensus 322 ~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G 401 (480)
T 2vch_A 322 TDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIR 401 (480)
T ss_dssp SCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTC
T ss_pred cchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhC
Confidence 01 12478888888877777765 99999999999999999999999999999999999999999999999999767899
Q ss_pred cceeeCC----CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 022811 225 IGMEVNR----DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLH 288 (291)
Q Consensus 225 ~G~~l~~----~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~ 288 (291)
+|+.+.. .+++++|+++|+++|.++++.+||+||+++++.+++++.+||+|.+++++||+++++
T Consensus 402 ~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 402 AALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp CEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred eEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 9999974 589999999999999876667999999999999999999999999999999999874
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=2.4e-48 Score=368.69 Aligned_cols=268 Identities=31% Similarity=0.557 Sum_probs=223.4
Q ss_pred CCCCCCCCCcccccCCcchHHHHHHHHHHhhhcCccEEEEcCcccccHHHHHHHHhc---CCCeEEEccccccCCCCCcc
Q 022811 2 SNMRLKDFPSLMRVTDANDILFNYMKTEVQNCLESSAIIFNTFDEHEGKVLEAIASK---SPNIYTVGPLHLLCRHLPES 78 (291)
Q Consensus 2 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~---~p~v~~vGpl~~~~~~~~~~ 78 (291)
+|++.+|||.++... ..++..+.+..+.+++++++++||+++||+++++.++.. .|++++|||++.........
T Consensus 181 ~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~~v~~vGpl~~~~~~~~~~ 257 (463)
T 2acv_A 181 NQVPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPLLDLKGQPNPK 257 (463)
T ss_dssp SCEEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCCEEECCCCCCSSCCCBTT
T ss_pred CCCChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCCcEEEeCCCcccccccccc
Confidence 455666777655432 225556666677788999999999999999998887653 56899999998643100000
Q ss_pred ccccccCCCCCCChhhHhhhccCCCCceEEEEcCCcc-cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHH
Q 022811 79 EFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSIT-VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFY 157 (291)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~-~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~ 157 (291)
.. |..+.++.+||+.++++++|||||||+. ..+.+++.+++.+|++.+++|||+++.+ ...+++++.
T Consensus 258 ------~~-~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~-----~~~l~~~~~ 325 (463)
T 2acv_A 258 ------LD-QAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE-----KKVFPEGFL 325 (463)
T ss_dssp ------BC-HHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC-----GGGSCTTHH
T ss_pred ------cc-cccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC-----cccCChhHH
Confidence 00 1124578999999888999999999998 8888999999999999999999999853 123667777
Q ss_pred HHh--cCCeEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceee-C----
Q 022811 158 EEI--KDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEV-N---- 230 (291)
Q Consensus 158 ~~~--~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l-~---- 230 (291)
++. ++|+++++|+||.++|+|+++++|||||||||++|++++|||||++|+++||+.||+++++++|+|+.+ .
T Consensus 326 ~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~ 405 (463)
T 2acv_A 326 EWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRK 405 (463)
T ss_dssp HHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCT
T ss_pred HhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCC
Confidence 666 789999999999999999999999999999999999999999999999999999999965789999999 2
Q ss_pred C--CCCHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 022811 231 R--DASREDIAALVKEIME-GDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVL 287 (291)
Q Consensus 231 ~--~~~~~~l~~ai~~vl~-~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 287 (291)
. .+++++|.++|+++|+ ++ +||+||+++++.+++++++||||.+++++||++++
T Consensus 406 ~~~~~~~~~l~~ai~~ll~~~~---~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 406 GSDVVAAEEIEKGLKDLMDKDS---IVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp TCCCCCHHHHHHHHHHHTCTTC---THHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred CCccccHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 3 5899999999999997 45 89999999999999999999999999999999884
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.97 E-value=3.4e-30 Score=240.52 Aligned_cols=211 Identities=20% Similarity=0.254 Sum_probs=170.4
Q ss_pred CccEEEEcCcccccHHHHHHHHhcCCCeEEEccccccCCCCCccccccccCCCCCCChhhHhhhccCCCCceEEEEcCCc
Q 022811 35 ESSAIIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSI 114 (291)
Q Consensus 35 ~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~ 114 (291)
.++.+|+|++++|+++. +.+.+++++|||+..... ...+|++..+++++|||+|||.
T Consensus 209 ~~~~~l~~~~~~l~~~~----~~~~~~~~~vGp~~~~~~-------------------~~~~~~~~~~~~~~v~v~~Gs~ 265 (424)
T 2iya_A 209 APNRCIVALPRTFQIKG----DTVGDNYTFVGPTYGDRS-------------------HQGTWEGPGDGRPVLLIALGSA 265 (424)
T ss_dssp CCSSEEESSCTTTSTTG----GGCCTTEEECCCCCCCCG-------------------GGCCCCCCCSSCCEEEEECCSS
T ss_pred CCCcEEEEcchhhCCCc----cCCCCCEEEeCCCCCCcc-------------------cCCCCCccCCCCCEEEEEcCCC
Confidence 57899999999998762 345678999999764210 1225777666788999999999
Q ss_pred ccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcceEEecCCchhHH
Q 022811 115 TVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSIL 194 (291)
Q Consensus 115 ~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~ 194 (291)
.....+.+.++++++++.+++++|.++.... ...+ ...++|+.+.+|+||.++|.|+++ ||||||+||++
T Consensus 266 ~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~---~~~~-----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~ 335 (424)
T 2iya_A 266 FTDHLDFYRTCLSAVDGLDWHVVLSVGRFVD---PADL-----GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTM 335 (424)
T ss_dssp SCCCHHHHHHHHHHHTTCSSEEEEECCTTSC---GGGG-----CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHH
T ss_pred CcchHHHHHHHHHHHhcCCcEEEEEECCcCC---hHHh-----ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHH
Confidence 8666788999999999888999998875311 0111 124679999999999999999998 99999999999
Q ss_pred HHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCC
Q 022811 195 ESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGG 273 (291)
Q Consensus 195 Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg 273 (291)
||+++|+|+|++|.+.||+.||+++ ++.|+|+.+.. .++.++|.++|+++|+|+ +++++++++++.+++. +|
T Consensus 336 Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~~---~~ 408 (424)
T 2iya_A 336 EALSNAVPMVAVPQIAEQTMNAERI-VELGLGRHIPRDQVTAEKLREAVLAVASDP---GVAERLAAVRQEIREA---GG 408 (424)
T ss_dssp HHHHTTCCEEECCCSHHHHHHHHHH-HHTTSEEECCGGGCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHTS---CH
T ss_pred HHHHcCCCEEEecCccchHHHHHHH-HHCCCEEEcCcCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHhc---Cc
Confidence 9999999999999999999999999 67899999874 689999999999999988 8999999999888652 32
Q ss_pred ChHHHHHHHHHHHH
Q 022811 274 ASFNNFNKCIKEVL 287 (291)
Q Consensus 274 ~s~~~~~~~v~~l~ 287 (291)
...+.+.|+.+.
T Consensus 409 --~~~~~~~i~~~~ 420 (424)
T 2iya_A 409 --ARAAADILEGIL 420 (424)
T ss_dssp --HHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHH
Confidence 344555665554
No 7
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.96 E-value=1.9e-29 Score=235.23 Aligned_cols=206 Identities=11% Similarity=0.103 Sum_probs=163.7
Q ss_pred EEEEcCcccccH-HHHHHHHhcCCCeEEEccccccCCCCCccccccccCCCCCCChhhHhhhccCCCCceEEEEcCCccc
Q 022811 38 AIIFNTFDEHEG-KVLEAIASKSPNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITV 116 (291)
Q Consensus 38 ~~l~ns~~~le~-~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~ 116 (291)
++|+|++++||+ + ++.. ++++|||+..... +..+.++.+||+.. +++|||+|||..
T Consensus 193 ~~l~~~~~~l~~~~-----~~~~-~~~~vG~~~~~~~--------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~- 249 (415)
T 1iir_A 193 HPWVAADPVLAPLQ-----PTDL-DAVQTGAWILPDE--------------RPLSPELAAFLDAG--PPPVYLGFGSLG- 249 (415)
T ss_dssp SCEECSCTTTSCCC-----CCSS-CCEECCCCCCCCC--------------CCCCHHHHHHHHTS--SCCEEEECC----
T ss_pred CEEEeeChhhcCCC-----cccC-CeEeeCCCccCcc--------------cCCCHHHHHHHhhC--CCeEEEeCCCCC-
Confidence 689999999987 4 2333 7999999975321 11345788999864 479999999997
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcceEEecCCchhHHHH
Q 022811 117 MTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILES 196 (291)
Q Consensus 117 ~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Ea 196 (291)
...+.++.+++++++.+++|+|+++..... . ...++|+.+.+|+||.++|.++++ ||||||+||++||
T Consensus 250 ~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-----~-----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea 317 (415)
T 1iir_A 250 APADAVRVAIDAIRAHGRRVILSRGWADLV-----L-----PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVA 317 (415)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECTTCTTCC-----C-----SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHCCCeEEEEeCCCccc-----c-----cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHH
Confidence 567888999999999999999998754210 1 123568999999999999966666 9999999999999
Q ss_pred HhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCCh
Q 022811 197 VCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGAS 275 (291)
Q Consensus 197 l~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s 275 (291)
+++|+|+|++|++.||+.||+++ ++.|+|+.+.. .++.++|.++|+++ +|+ +|+++++++++.++. ..+
T Consensus 318 ~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~-----~~~ 387 (415)
T 1iir_A 318 ARAGAPQILLPQMADQPYYAGRV-AELGVGVAHDGPIPTFDSLSAALATA-LTP---ETHARATAVAGTIRT-----DGA 387 (415)
T ss_dssp HHHTCCEEECCCSTTHHHHHHHH-HHHTSEEECSSSSCCHHHHHHHHHHH-TSH---HHHHHHHHHHHHSCS-----CHH
T ss_pred HHcCCCEEECCCCCccHHHHHHH-HHCCCcccCCcCCCCHHHHHHHHHHH-cCH---HHHHHHHHHHHHHhh-----cCh
Confidence 99999999999999999999999 77899999874 68999999999999 887 899999998888643 233
Q ss_pred HHHHHHHHHHHHh
Q 022811 276 FNNFNKCIKEVLH 288 (291)
Q Consensus 276 ~~~~~~~v~~l~~ 288 (291)
...+.++|+++..
T Consensus 388 ~~~~~~~i~~~~~ 400 (415)
T 1iir_A 388 AVAARLLLDAVSR 400 (415)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 4556667766654
No 8
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.96 E-value=3.4e-29 Score=233.45 Aligned_cols=206 Identities=13% Similarity=0.108 Sum_probs=164.4
Q ss_pred EEEEcCcccccHHHHHHHHhcCCCeEEEccccccCCCCCccccccccCCCCCCChhhHhhhccCCCCceEEEEcCCccc-
Q 022811 38 AIIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITV- 116 (291)
Q Consensus 38 ~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~- 116 (291)
++|+|++++|+++ ++.. ++++|||++.... +..+.++.+|++.. +++|||++||...
T Consensus 193 ~~l~~~~~~l~~~-----~~~~-~~~~vG~~~~~~~--------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~ 250 (416)
T 1rrv_A 193 RPLLAADPVLAPL-----QPDV-DAVQTGAWLLSDE--------------RPLPPELEAFLAAG--SPPVHIGFGSSSGR 250 (416)
T ss_dssp SCEECSCTTTSCC-----CSSC-CCEECCCCCCCCC--------------CCCCHHHHHHHHSS--SCCEEECCTTCCSH
T ss_pred CeEEccCccccCC-----CCCC-CeeeECCCccCcc--------------CCCCHHHHHHHhcC--CCeEEEecCCCCcc
Confidence 7999999999874 2223 7999999986421 11345788999764 4789999999863
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcceEEecCCchhHHHH
Q 022811 117 MTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILES 196 (291)
Q Consensus 117 ~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Ea 196 (291)
...+.+.++++++.+.+++|+|+++.... . . ...++|+.+.+|+||.++|.++++ ||||||+||++||
T Consensus 251 ~~~~~~~~~~~al~~~~~~~v~~~g~~~~----~-~-----~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea 318 (416)
T 1rrv_A 251 GIADAAKVAVEAIRAQGRRVILSRGWTEL----V-L-----PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVA 318 (416)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEECTTTTC----C-C-----SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHH
T ss_pred ChHHHHHHHHHHHHHCCCeEEEEeCCccc----c-c-----cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHH
Confidence 45677889999999999999999875421 0 1 124678999999999999977776 9999999999999
Q ss_pred HhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCCh
Q 022811 197 VCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGAS 275 (291)
Q Consensus 197 l~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s 275 (291)
+++|+|+|++|++.||+.||+++ ++.|+|+.+.. ..+.++|.++|+++ .|+ +|+++++++++.++. .++.
T Consensus 319 ~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~----~~~~ 389 (416)
T 1rrv_A 319 TRAGVPQLVIPRNTDQPYFAGRV-AALGIGVAHDGPTPTFESLSAALTTV-LAP---ETRARAEAVAGMVLT----DGAA 389 (416)
T ss_dssp HHHTCCEEECCCSBTHHHHHHHH-HHHTSEEECSSSCCCHHHHHHHHHHH-TSH---HHHHHHHHHTTTCCC----CHHH
T ss_pred HHcCCCEEEccCCCCcHHHHHHH-HHCCCccCCCCCCCCHHHHHHHHHHh-hCH---HHHHHHHHHHHHHhh----cCcH
Confidence 99999999999999999999999 67899999874 68999999999999 888 899999998887653 2222
Q ss_pred HHHHHHHH-HHHHh
Q 022811 276 FNNFNKCI-KEVLH 288 (291)
Q Consensus 276 ~~~~~~~v-~~l~~ 288 (291)
.+.+.| +.+.+
T Consensus 390 --~~~~~i~e~~~~ 401 (416)
T 1rrv_A 390 --AAADLVLAAVGR 401 (416)
T ss_dssp --HHHHHHHHHHHC
T ss_pred --HHHHHHHHHHhc
Confidence 445555 66543
No 9
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.96 E-value=3.2e-29 Score=231.38 Aligned_cols=170 Identities=18% Similarity=0.293 Sum_probs=136.3
Q ss_pred hhHhhhccCCCCceEEEEcCCcccCC--HHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeecc
Q 022811 93 ECLKWLNEKEPNSVAYVNYGSITVMT--DEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWC 170 (291)
Q Consensus 93 ~~~~wl~~~~~~~vvyvs~GS~~~~~--~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~ 170 (291)
.+.+|++..+++++|||||||..... ...+.++++++.+.+..++|.++..... .. ...++|+++.+|+
T Consensus 226 ~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~----~~-----~~~~~~v~~~~~~ 296 (400)
T 4amg_A 226 VLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLA----LL-----GELPANVRVVEWI 296 (400)
T ss_dssp ECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCC----CC-----CCCCTTEEEECCC
T ss_pred cCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcccc----cc-----ccCCCCEEEEeec
Confidence 44579998888999999999986433 3568889999999999999998754211 11 1246899999999
Q ss_pred CcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCC
Q 022811 171 PQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGD 249 (291)
Q Consensus 171 pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~ 249 (291)
||.++|.|+++ ||||||+||++||+++|||+|++|+++||+.||+++ ++.|+|+.++. +.+ .++|+++|+|+
T Consensus 297 p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v-~~~G~g~~l~~~~~~----~~al~~lL~d~ 369 (400)
T 4amg_A 297 PLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVL-TGLGIGFDAEAGSLG----AEQCRRLLDDA 369 (400)
T ss_dssp CHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHH-HHHTSEEECCTTTCS----HHHHHHHHHCH
T ss_pred CHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHH-HHCCCEEEcCCCCch----HHHHHHHHcCH
Confidence 99999999888 999999999999999999999999999999999999 67899999974 444 45788899998
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 022811 250 KGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEV 286 (291)
Q Consensus 250 ~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l 286 (291)
+||+||+++++.+++. .| ...+.+.+++|
T Consensus 370 ---~~r~~a~~l~~~~~~~---~~--~~~~a~~le~l 398 (400)
T 4amg_A 370 ---GLREAALRVRQEMSEM---PP--PAETAAXLVAL 398 (400)
T ss_dssp ---HHHHHHHHHHHHHHTS---CC--HHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHcC---CC--HHHHHHHHHHh
Confidence 9999999999998773 22 34556666665
No 10
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.96 E-value=6.3e-28 Score=198.04 Aligned_cols=161 Identities=25% Similarity=0.445 Sum_probs=137.6
Q ss_pred CChhhHhhhccCCCCceEEEEcCCcc-cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEee
Q 022811 90 EDPECLKWLNEKEPNSVAYVNYGSIT-VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIAN 168 (291)
Q Consensus 90 ~~~~~~~wl~~~~~~~vvyvs~GS~~-~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 168 (291)
.+.++.+|++..+++++|||++||.. ....+.+..+++++.+.+++++|+.+... ++ ..++|+.+.+
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--------~~----~~~~~v~~~~ 74 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK--------PD----TLGLNTRLYK 74 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC--------CT----TCCTTEEEES
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC--------cc----cCCCcEEEec
Confidence 34678999987767789999999996 45678899999999988899999987441 11 1357899999
Q ss_pred ccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHc
Q 022811 169 WCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIME 247 (291)
Q Consensus 169 w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~ 247 (291)
|+||..+|.|+.+++||||||+||++||+++|+|+|++|...||..||+++ ++.|+|+.+.. .++.++|.++|+++++
T Consensus 75 ~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~ll~ 153 (170)
T 2o6l_A 75 WIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDFNTMSSTDLLNALKRVIN 153 (170)
T ss_dssp SCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEeccccCCHHHHHHHHHHHHc
Confidence 999999997777788999999999999999999999999999999999999 67899999875 6799999999999999
Q ss_pred CChHHHHHHHHHHHHHHHH
Q 022811 248 GDKGKLIRQNVQDWRKKAE 266 (291)
Q Consensus 248 ~~~~~~~r~~a~~l~~~~~ 266 (291)
|+ .|+++++++++.++
T Consensus 154 ~~---~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 154 DP---SYKENVMKLSRIQH 169 (170)
T ss_dssp CH---HHHHHHHHHC----
T ss_pred CH---HHHHHHHHHHHHhh
Confidence 88 89999999988875
No 11
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.95 E-value=2.4e-27 Score=218.13 Aligned_cols=177 Identities=18% Similarity=0.272 Sum_probs=146.3
Q ss_pred hHhhhccCCCCceEEEEcCCcccC-----CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEee
Q 022811 94 CLKWLNEKEPNSVAYVNYGSITVM-----TDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIAN 168 (291)
Q Consensus 94 ~~~wl~~~~~~~vvyvs~GS~~~~-----~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 168 (291)
+.+|++..+++++|||++||.... +.+.+..+++++.+.+++|+|+.+.. ..+.+ ...++|+.+ +
T Consensus 200 ~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~--------~~~~l-~~~~~~v~~-~ 269 (384)
T 2p6p_A 200 LEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDT--------VAEAL-RAEVPQARV-G 269 (384)
T ss_dssp CCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHH--------HHHHH-HHHCTTSEE-E
T ss_pred CCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCC--------CHHhh-CCCCCceEE-c
Confidence 457887655678999999999754 44678889999998899999987632 11122 235789999 9
Q ss_pred ccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHc
Q 022811 169 WCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIME 247 (291)
Q Consensus 169 w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~ 247 (291)
|+||.++|.++++ ||||||+||++||+++|+|+|++|...||+.||+++ ++.|+|+.+.. ..+.++|.++|+++|+
T Consensus 270 ~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~-~~~g~g~~~~~~~~~~~~l~~~i~~ll~ 346 (384)
T 2p6p_A 270 WTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRV-ADYGAAIALLPGEDSTEAIADSCQELQA 346 (384)
T ss_dssp CCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCTTCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHH-HHCCCeEecCcCCCCHHHHHHHHHHHHc
Confidence 9999999988777 999999999999999999999999999999999999 67799999875 6799999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcCC
Q 022811 248 GDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHYHH 291 (291)
Q Consensus 248 ~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~~~ 291 (291)
|+ .++++++++++.++.. + +...+.+.|+.|.++||
T Consensus 347 ~~---~~~~~~~~~~~~~~~~---~--~~~~~~~~i~~~~~~~~ 382 (384)
T 2p6p_A 347 KD---TYARRAQDLSREISGM---P--LPATVVTALEQLAHHHH 382 (384)
T ss_dssp CH---HHHHHHHHHHHHHHTS---C--CHHHHHHHHHHHHHHHC
T ss_pred CH---HHHHHHHHHHHHHHhC---C--CHHHHHHHHHHHhhhcc
Confidence 98 8999999999988762 2 35566777777766544
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.94 E-value=1e-26 Score=216.32 Aligned_cols=190 Identities=13% Similarity=0.123 Sum_probs=155.6
Q ss_pred cEEEEcCcccccHHHHHHHHhcCCCeEEEccccccCCCCCccccccccCCCCCCChhhHhhhccCCCCceEEEEcCCccc
Q 022811 37 SAIIFNTFDEHEGKVLEAIASKSPNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSITV 116 (291)
Q Consensus 37 ~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~ 116 (291)
+..++++.+.+.+. +++.++++++|+++..... ..+.++.+|++. .+++|||+|||...
T Consensus 175 ~~~l~~~~~~l~p~-----~~~~~~~~~~G~~~~~~~~--------------~~~~~l~~~l~~--~~~~Vlv~~Gs~~~ 233 (404)
T 3h4t_A 175 DQPWLAADPVLSPL-----RPTDLGTVQTGAWILPDQR--------------PLSAELEGFLRA--GSPPVYVGFGSGPA 233 (404)
T ss_dssp SSCEECSCTTTSCC-----CTTCCSCCBCCCCCCCCCC--------------CCCHHHHHHHHT--SSCCEEECCTTSCC
T ss_pred CCeEEeeCcceeCC-----CCCCCCeEEeCccccCCCC--------------CCCHHHHHHHhc--CCCeEEEECCCCCC
Confidence 34567777777654 3455689999987653211 134568889874 46799999999986
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcceEEecCCchhHHHH
Q 022811 117 MTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILES 196 (291)
Q Consensus 117 ~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Ea 196 (291)
..+.+..+++++.+.+++++|+.+..... .. ..++|+.+.+|+||.++|.++++ ||||||+||+.|+
T Consensus 234 -~~~~~~~~~~al~~~~~~vv~~~g~~~~~----~~------~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Ea 300 (404)
T 3h4t_A 234 -PAEAARVAIEAVRAQGRRVVLSSGWAGLG----RI------DEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAV 300 (404)
T ss_dssp -CTTHHHHHHHHHHHTTCCEEEECTTTTCC----CS------SCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHH
T ss_pred -cHHHHHHHHHHHHhCCCEEEEEeCCcccc----cc------cCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHH
Confidence 67788999999999999999998754211 11 13579999999999999988777 9999999999999
Q ss_pred HhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 022811 197 VCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKA 265 (291)
Q Consensus 197 l~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~ 265 (291)
+++|+|+|++|++.||+.||+++ ++.|+|+.+.. .++.++|.++|+++++ + +|+++++++++.+
T Consensus 301 l~~GvP~v~~p~~~dQ~~na~~~-~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~---~~~~~~~~~~~~~ 365 (404)
T 3h4t_A 301 TRAGAPQVVVPQKADQPYYAGRV-ADLGVGVAHDGPTPTVESLSAALATALT-P---GIRARAAAVAGTI 365 (404)
T ss_dssp HHHTCCEEECCCSTTHHHHHHHH-HHHTSEEECSSSSCCHHHHHHHHHHHTS-H---HHHHHHHHHHTTC
T ss_pred HHcCCCEEEcCCcccHHHHHHHH-HHCCCEeccCcCCCCHHHHHHHHHHHhC-H---HHHHHHHHHHHHH
Confidence 99999999999999999999999 67899999975 6799999999999998 7 8999999888775
No 13
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.93 E-value=2.3e-25 Score=206.74 Aligned_cols=208 Identities=17% Similarity=0.230 Sum_probs=164.5
Q ss_pred cEEEEcCcccccHHHHHHHHh-cCCCeEEEccccccCCCCCccccccccCCCCCCChhhHhhhccCCCCceEEEEcCCcc
Q 022811 37 SAIIFNTFDEHEGKVLEAIAS-KSPNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSIT 115 (291)
Q Consensus 37 ~~~l~ns~~~le~~~l~~~~~-~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~ 115 (291)
+..++.+-+++++. +. ...++.++||+..... +...|....+++++|||++||..
T Consensus 203 ~~~l~~~~~~~~~~-----~~~~~~~~~~vGp~~~~~~-------------------~~~~~~~~~~~~~~v~v~~Gs~~ 258 (415)
T 3rsc_A 203 QLNLVFVPKAFQIA-----GDTFDDRFVFVGPCFDDRR-------------------FLGEWTRPADDLPVVLVSLGTTF 258 (415)
T ss_dssp SEEEESSCTTTSTT-----GGGCCTTEEECCCCCCCCG-------------------GGCCCCCCSSCCCEEEEECTTTS
T ss_pred CeEEEEcCcccCCC-----cccCCCceEEeCCCCCCcc-------------------cCcCccccCCCCCEEEEECCCCC
Confidence 77888887777654 33 3457999999864211 12236555557889999999997
Q ss_pred cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcceEEecCCchhHHH
Q 022811 116 VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILE 195 (291)
Q Consensus 116 ~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~E 195 (291)
....+.+..+++++.+.+.+++|.++..... +.+ ...++|+.+.+|+|+..+|.++++ ||||||+||++|
T Consensus 259 ~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~---~~l-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~E 328 (415)
T 3rsc_A 259 NDRPGFFRDCARAFDGQPWHVVMTLGGQVDP---AAL-----GDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLME 328 (415)
T ss_dssp CCCHHHHHHHHHHHTTSSCEEEEECTTTSCG---GGG-----CCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHH
T ss_pred CChHHHHHHHHHHHhcCCcEEEEEeCCCCCh---HHh-----cCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHH
Confidence 6677889999999998889999988754110 111 124679999999999999999888 999999999999
Q ss_pred HHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCC
Q 022811 196 SVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGA 274 (291)
Q Consensus 196 al~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~ 274 (291)
++++|+|+|++|...||+.||+++ ++.|+|+.+.. +++.++|.++|+++++|+ +++++++++++.+.. .++
T Consensus 329 a~~~G~P~v~~p~~~~q~~~a~~l-~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~ 400 (415)
T 3rsc_A 329 ALYWGRPLVVVPQSFDVQPMARRV-DQLGLGAVLPGEKADGDTLLAAVGAVAADP---ALLARVEAMRGHVRR----AGG 400 (415)
T ss_dssp HHHTTCCEEECCCSGGGHHHHHHH-HHHTCEEECCGGGCCHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHH----SCH
T ss_pred HHHhCCCEEEeCCcchHHHHHHHH-HHcCCEEEcccCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCH
Confidence 999999999999999999999999 66799999875 689999999999999998 899999999988866 333
Q ss_pred hHHHHHHHHHHHH
Q 022811 275 SFNNFNKCIKEVL 287 (291)
Q Consensus 275 s~~~~~~~v~~l~ 287 (291)
...+.+.|+.+.
T Consensus 401 -~~~~~~~i~~~~ 412 (415)
T 3rsc_A 401 -AARAADAVEAYL 412 (415)
T ss_dssp -HHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHh
Confidence 344555555443
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.93 E-value=2.7e-25 Score=207.40 Aligned_cols=196 Identities=15% Similarity=0.222 Sum_probs=154.1
Q ss_pred CccEEEEcCcccccHHHHHHHHhcCCC-eEEEccccccCCCCCccccccccCCCCCCChhhHhhhccCCCCceEEEEcCC
Q 022811 35 ESSAIIFNTFDEHEGKVLEAIASKSPN-IYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGS 113 (291)
Q Consensus 35 ~~~~~l~ns~~~le~~~l~~~~~~~p~-v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS 113 (291)
.++.+|+|+.+++++.. +...++ +++|||+...... ..+|.+..+++++||+++||
T Consensus 185 ~~~~~l~~~~~~~~~~~----~~~~~~~v~~vG~~~~~~~~-------------------~~~~~~~~~~~~~v~v~~Gs 241 (430)
T 2iyf_A 185 HPPRSLVLIPKALQPHA----DRVDEDVYTFVGACQGDRAE-------------------EGGWQRPAGAEKVVLVSLGS 241 (430)
T ss_dssp CCSSEEECSCGGGSTTG----GGSCTTTEEECCCCC------------------------CCCCCCCTTCSEEEEEECTT
T ss_pred CCCcEEEeCcHHhCCCc----ccCCCccEEEeCCcCCCCCC-------------------CCCCccccCCCCeEEEEcCC
Confidence 46899999999888652 234567 9999986532110 11355544567899999999
Q ss_pred cccCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcceEEecCCchh
Q 022811 114 ITVMTDEQMKEFAWGLANS-GHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNS 192 (291)
Q Consensus 114 ~~~~~~~~~~~i~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S 192 (291)
......+.+..+++++.+. +.+++|.++.... ...+ ...++|+.+.+|+||.++|.++++ ||||||+||
T Consensus 242 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~---~~~l-----~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t 311 (430)
T 2iyf_A 242 AFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVT---PAEL-----GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGG 311 (430)
T ss_dssp TCC-CHHHHHHHHHHHTTCTTEEEEEECC---C---GGGG-----CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHH
T ss_pred CCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCC---hHHh-----ccCCCCeEEEecCCHHHHhhccCE--EEECCCccH
Confidence 9855678889999999885 7889898875311 0111 124578999999999999999998 999999999
Q ss_pred HHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Q 022811 193 ILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEA 267 (291)
Q Consensus 193 ~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 267 (291)
++||+++|+|+|++|..+||..|++++ ++.|+|+.+.. .++.++|.++|+++++|+ .+++++.++++.+.+
T Consensus 312 ~~Ea~~~G~P~i~~p~~~~q~~~a~~~-~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 312 SQEGLATATPMIAVPQAVDQFGNADML-QGLGVARKLATEEATADLLRETALALVDDP---EVARRLRRIQAEMAQ 383 (430)
T ss_dssp HHHHHHTTCCEEECCCSHHHHHHHHHH-HHTTSEEECCCC-CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEECCCccchHHHHHHH-HHcCCEEEcCCCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 999999999999999999999999999 66799999874 578999999999999988 899998888887765
No 15
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.92 E-value=1.8e-24 Score=199.22 Aligned_cols=208 Identities=18% Similarity=0.237 Sum_probs=162.4
Q ss_pred cEEEEcCcccccHHHHHHHHh-cCCCeEEEccccccCCCCCccccccccCCCCCCChhhHhhhccCCCCceEEEEcCCcc
Q 022811 37 SAIIFNTFDEHEGKVLEAIAS-KSPNIYTVGPLHLLCRHLPESEFKSFRSNLWKEDPECLKWLNEKEPNSVAYVNYGSIT 115 (291)
Q Consensus 37 ~~~l~ns~~~le~~~l~~~~~-~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~ 115 (291)
+..++.+-+++++. .. ...++.+|||+..... ....|+...+++++||+++||..
T Consensus 187 ~~~l~~~~~~~~~~-----~~~~~~~~~~vGp~~~~~~-------------------~~~~~~~~~~~~~~v~v~~G~~~ 242 (402)
T 3ia7_A 187 GLTIVFLPKSFQPF-----AETFDERFAFVGPTLTGRD-------------------GQPGWQPPRPDAPVLLVSLGNQF 242 (402)
T ss_dssp SCEEESSCGGGSTT-----GGGCCTTEEECCCCCCC-----------------------CCCCCSSTTCCEEEEECCSCS
T ss_pred CeEEEEcChHhCCc-----cccCCCCeEEeCCCCCCcc-------------------cCCCCcccCCCCCEEEEECCCCC
Confidence 67777777776654 33 3457999999864311 11235554556789999999998
Q ss_pred cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcceEEecCCchhHHH
Q 022811 116 VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVFLTHGGWNSILE 195 (291)
Q Consensus 116 ~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~E 195 (291)
....+.+..+++++.+.+.+++|.++.... ...+ ...++|+.+.+|+|+.++|.++++ ||||||+||+.|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~E 312 (402)
T 3ia7_A 243 NEHPEFFRACAQAFADTPWHVVMAIGGFLD---PAVL-----GPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLE 312 (402)
T ss_dssp SCCHHHHHHHHHHHTTSSCEEEEECCTTSC---GGGG-----CSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHH
T ss_pred cchHHHHHHHHHHHhcCCcEEEEEeCCcCC---hhhh-----CCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHH
Confidence 767788999999999888899998875311 0111 124679999999999999999988 999999999999
Q ss_pred HHhcCCCeeeccc-ccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCC
Q 022811 196 SVCGGVPIICWPF-FAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGG 273 (291)
Q Consensus 196 al~~GvP~i~~P~-~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg 273 (291)
++++|+|+|++|. ..||..|+.++ ++.|+|..+.. .++.+.|.++|+++|+|+ +++++++++++.+.+ .+
T Consensus 313 a~~~G~P~v~~p~~~~~q~~~a~~~-~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~---~~~~~~~~~~~~~~~----~~ 384 (402)
T 3ia7_A 313 AFAAGVPLVLVPHFATEAAPSAERV-IELGLGSVLRPDQLEPASIREAVERLAADS---AVRERVRRMQRDILS----SG 384 (402)
T ss_dssp HHHTTCCEEECGGGCGGGHHHHHHH-HHTTSEEECCGGGCSHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SC
T ss_pred HHHhCCCEEEeCCCcccHHHHHHHH-HHcCCEEEccCCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHhh----CC
Confidence 9999999999999 99999999999 67799999875 679999999999999998 899999998888755 33
Q ss_pred ChHHHHHHHHHHHH
Q 022811 274 ASFNNFNKCIKEVL 287 (291)
Q Consensus 274 ~s~~~~~~~v~~l~ 287 (291)
+ ...+.+.|+++.
T Consensus 385 ~-~~~~~~~i~~~~ 397 (402)
T 3ia7_A 385 G-PARAADEVEAYL 397 (402)
T ss_dssp H-HHHHHHHHHHHH
T ss_pred h-HHHHHHHHHHHH
Confidence 3 344445555443
No 16
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.92 E-value=8.5e-25 Score=205.26 Aligned_cols=177 Identities=14% Similarity=0.205 Sum_probs=139.3
Q ss_pred hhhHhhhccCCCCceEEEEcCCcccC---CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEee
Q 022811 92 PECLKWLNEKEPNSVAYVNYGSITVM---TDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIAN 168 (291)
Q Consensus 92 ~~~~~wl~~~~~~~vvyvs~GS~~~~---~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 168 (291)
.++.+|++..+++++|||++||.... ..+.+..+++++.+.+++++|+.+.... ..+. ..++|+.+.+
T Consensus 255 ~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~----~~l~-----~~~~~v~~~~ 325 (441)
T 2yjn_A 255 SVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQL----EGVA-----NIPDNVRTVG 325 (441)
T ss_dssp CCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTT----SSCS-----SCCSSEEECC
T ss_pred cccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcch----hhhc-----cCCCCEEEec
Confidence 34678998666778999999999753 3356778888998889999998874411 1121 2457999999
Q ss_pred ccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHc
Q 022811 169 WCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIME 247 (291)
Q Consensus 169 w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~ 247 (291)
|+||.++|.++++ ||||||+||++|++++|+|+|++|+..||+.||+++ ++.|+|+.+.. .++.++|.++|+++++
T Consensus 326 ~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~ll~ 402 (441)
T 2yjn_A 326 FVPMHALLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIALPVPELTPDQLRESVKRVLD 402 (441)
T ss_dssp SCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEcccccCCHHHHHHHHHHHhc
Confidence 9999999988777 999999999999999999999999999999999999 67799999875 6899999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 022811 248 GDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLH 288 (291)
Q Consensus 248 ~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~ 288 (291)
|+ +++++++++++.++.. + +...+.+.|+.+..
T Consensus 403 ~~---~~~~~~~~~~~~~~~~---~--~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 403 DP---AHRAGAARMRDDMLAE---P--SPAEVVGICEELAA 435 (441)
T ss_dssp CH---HHHHHHHHHHHHHHTS---C--CHHHHHHHHHHHHH
T ss_pred CH---HHHHHHHHHHHHHHcC---C--CHHHHHHHHHHHHH
Confidence 98 8999999998887652 2 24556666666543
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.87 E-value=1.2e-22 Score=187.73 Aligned_cols=161 Identities=19% Similarity=0.300 Sum_probs=123.7
Q ss_pred hhhHhhhccCCCCceEEEEcCCcccC--------CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCC
Q 022811 92 PECLKWLNEKEPNSVAYVNYGSITVM--------TDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDR 163 (291)
Q Consensus 92 ~~~~~wl~~~~~~~vvyvs~GS~~~~--------~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
.++..|+...+++++|||++||.... ..+.+..+++++.+.+.+++|+.+... .+. ....++|
T Consensus 215 ~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~--------~~~-l~~~~~~ 285 (398)
T 4fzr_A 215 DQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKL--------AQT-LQPLPEG 285 (398)
T ss_dssp CCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC-----------------CCTT
T ss_pred CCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcc--------hhh-hccCCCc
Confidence 34567877656778999999999632 235678899999888999999876441 111 1235689
Q ss_pred eEEeeccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHH
Q 022811 164 GMIANWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALV 242 (291)
Q Consensus 164 ~~v~~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai 242 (291)
+.+.+|+|+.++|.++++ ||||||.||+.||+++|+|+|++|...||..|+.++ ++.|+|+.+.. .++.+.|.++|
T Consensus 286 v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~~~~~~~~~l~~ai 362 (398)
T 4fzr_A 286 VLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLL-HAAGAGVEVPWEQAGVESVLAAC 362 (398)
T ss_dssp EEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHH-HHTTSEEECC-------CHHHHH
T ss_pred EEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEecCcccCCHHHHHHHH
Confidence 999999999999999888 999999999999999999999999999999999999 67799999875 67889999999
Q ss_pred HHHHcCChHHHHHHHHHHHHHHHHH
Q 022811 243 KEIMEGDKGKLIRQNVQDWRKKAEA 267 (291)
Q Consensus 243 ~~vl~~~~~~~~r~~a~~l~~~~~~ 267 (291)
+++|+|+ .+++++++.++.+.+
T Consensus 363 ~~ll~~~---~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 363 ARIRDDS---SYVGNARRLAAEMAT 384 (398)
T ss_dssp HHHHHCT---HHHHHHHHHHHHHTT
T ss_pred HHHHhCH---HHHHHHHHHHHHHHc
Confidence 9999999 999999998888755
No 18
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.86 E-value=1.1e-21 Score=181.40 Aligned_cols=171 Identities=13% Similarity=0.193 Sum_probs=137.4
Q ss_pred hhHhhhccCCCCceEEEEcCCcccC--CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeecc
Q 022811 93 ECLKWLNEKEPNSVAYVNYGSITVM--TDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWC 170 (291)
Q Consensus 93 ~~~~wl~~~~~~~vvyvs~GS~~~~--~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~ 170 (291)
....|+...+++++|||++||.... ..+.+..+++++.+.+++++|+.+.... ..+. ..++|+.+.+|+
T Consensus 221 ~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~----~~l~-----~~~~~v~~~~~~ 291 (398)
T 3oti_A 221 VLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDI----SPLG-----TLPRNVRAVGWT 291 (398)
T ss_dssp ECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCC----GGGC-----SCCTTEEEESSC
T ss_pred CCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcCh----hhhc-----cCCCcEEEEccC
Confidence 4456776666788999999999642 5567888999999889999999875411 1111 246899999999
Q ss_pred CcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHH--HHHHHHhCcceeeCC-CCCHHHHHHHHHHHHc
Q 022811 171 PQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNC--RYASTTWGIGMEVNR-DASREDIAALVKEIME 247 (291)
Q Consensus 171 pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na--~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~ 247 (291)
|+.++|.++++ ||||||.||++||+++|+|+|++|.+.||..|+ .++ ++.|+|+.+.. ..+.+.+. ++++
T Consensus 292 ~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~-~~~g~g~~~~~~~~~~~~l~----~ll~ 364 (398)
T 3oti_A 292 PLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAV-SRRGIGLVSTSDKVDADLLR----RLIG 364 (398)
T ss_dssp CHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHH-HHHTSEEECCGGGCCHHHHH----HHHH
T ss_pred CHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHH-HHCCCEEeeCCCCCCHHHHH----HHHc
Confidence 99999999888 999999999999999999999999999999999 999 67899999975 56776666 7888
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 022811 248 GDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVL 287 (291)
Q Consensus 248 ~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 287 (291)
|+ .++++++++++.+.+ .. +...+.+.++.+.
T Consensus 365 ~~---~~~~~~~~~~~~~~~----~~-~~~~~~~~l~~l~ 396 (398)
T 3oti_A 365 DE---SLRTAAREVREEMVA----LP-TPAETVRRIVERI 396 (398)
T ss_dssp CH---HHHHHHHHHHHHHHT----SC-CHHHHHHHHHHHH
T ss_pred CH---HHHHHHHHHHHHHHh----CC-CHHHHHHHHHHHh
Confidence 88 899999999888765 22 3455566666553
No 19
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.85 E-value=1.2e-20 Score=173.57 Aligned_cols=174 Identities=14% Similarity=0.226 Sum_probs=138.3
Q ss_pred hhHhhhccCCCCceEEEEcCCccc--CC-HHHHHHHHHHHHhC-CCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEee
Q 022811 93 ECLKWLNEKEPNSVAYVNYGSITV--MT-DEQMKEFAWGLANS-GHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIAN 168 (291)
Q Consensus 93 ~~~~wl~~~~~~~vvyvs~GS~~~--~~-~~~~~~i~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 168 (291)
....|+...+++++||+++||... .. ...+..++++ .+. +.+|+|+.+... ...+. ..++|+.+.+
T Consensus 207 ~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~----~~~l~-----~~~~~v~~~~ 276 (391)
T 3tsa_A 207 AFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEH----RALLT-----DLPDNARIAE 276 (391)
T ss_dssp ECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGG----GGGCT-----TCCTTEEECC
T ss_pred CCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcc----hhhcc-----cCCCCEEEec
Confidence 445687766678899999999853 23 6778888888 776 778888876431 11111 2467999999
Q ss_pred ccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC---CCCHHHHHHHHHHH
Q 022811 169 WCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR---DASREDIAALVKEI 245 (291)
Q Consensus 169 w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~---~~~~~~l~~ai~~v 245 (291)
|+|+.++|.++++ ||||||.||++||+++|+|+|++|...||..|+.++ +..|+|+.+.. ..+.+.|.++|.++
T Consensus 277 ~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~~~~~~~~~~~l~~ai~~l 353 (391)
T 3tsa_A 277 SVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNL-AAAGAGICLPDEQAQSDHEQFTDSIATV 353 (391)
T ss_dssp SCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHH-HHTTSEEECCSHHHHTCHHHHHHHHHHH
T ss_pred cCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHH-HHcCCEEecCcccccCCHHHHHHHHHHH
Confidence 9999999988887 999999999999999999999999999999999999 67799999873 37899999999999
Q ss_pred HcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 022811 246 MEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVL 287 (291)
Q Consensus 246 l~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 287 (291)
++|+ .++++++++++.+.+ ..+ ...+.+.++.+.
T Consensus 354 l~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~~ 387 (391)
T 3tsa_A 354 LGDT---GFAAAAIKLSDEITA----MPH-PAALVRTLENTA 387 (391)
T ss_dssp HTCT---HHHHHHHHHHHHHHT----SCC-HHHHHHHHHHC-
T ss_pred HcCH---HHHHHHHHHHHHHHc----CCC-HHHHHHHHHHHH
Confidence 9999 899999988888755 333 344555555543
No 20
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.83 E-value=1e-18 Score=161.42 Aligned_cols=172 Identities=19% Similarity=0.327 Sum_probs=139.1
Q ss_pred hh-hccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCccc
Q 022811 96 KW-LNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDK 174 (291)
Q Consensus 96 ~w-l~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~ 174 (291)
+| ....+++++||+++||......+.+..+++++.+.+.+++|+.+..... +.+. ..++|+.+.+|+|+..
T Consensus 233 ~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~---~~l~-----~~~~~v~~~~~~~~~~ 304 (412)
T 3otg_A 233 AWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDV---SGLG-----EVPANVRLESWVPQAA 304 (412)
T ss_dssp GGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCC---TTCC-----CCCTTEEEESCCCHHH
T ss_pred CccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCCh---hhhc-----cCCCcEEEeCCCCHHH
Confidence 46 3333467899999999976667889999999998899999998754211 1111 2457899999999999
Q ss_pred ccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCChHHH
Q 022811 175 VLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGDKGKL 253 (291)
Q Consensus 175 iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~ 253 (291)
+|.++++ ||+|||+||++||+++|+|+|++|...||..|+..+ +..|+|..+.. ..+.++|.++|.++++|+ .
T Consensus 305 ~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v-~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~---~ 378 (412)
T 3otg_A 305 LLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAV-AQAGAGDHLLPDNISPDSVSGAAKRLLAEE---S 378 (412)
T ss_dssp HGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HHHTSEEECCGGGCCHHHHHHHHHHHHHCH---H
T ss_pred HHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEecCcccCCHHHHHHHHHHHHhCH---H
Confidence 9999998 999999999999999999999999999999999999 66799999975 679999999999999998 8
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 022811 254 IRQNVQDWRKKAEAATDVGGASFNNFNKCIKEV 286 (291)
Q Consensus 254 ~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l 286 (291)
+++++.+.+..+.+ ..+ ...+.+.++++
T Consensus 379 ~~~~~~~~~~~~~~----~~~-~~~~~~~~~~l 406 (412)
T 3otg_A 379 YRAGARAVAAEIAA----MPG-PDEVVRLLPGF 406 (412)
T ss_dssp HHHHHHHHHHHHHH----SCC-HHHHHTTHHHH
T ss_pred HHHHHHHHHHHHhc----CCC-HHHHHHHHHHH
Confidence 89988888777755 233 34444544444
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.68 E-value=1.7e-16 Score=145.56 Aligned_cols=169 Identities=14% Similarity=0.150 Sum_probs=117.3
Q ss_pred CCCceEEEEcCCcccCCHHHHHHHHHHHHh----CCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcc-ccc
Q 022811 102 EPNSVAYVNYGSITVMTDEQMKEFAWGLAN----SGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQD-KVL 176 (291)
Q Consensus 102 ~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~----~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~-~iL 176 (291)
+++++|+|..||.+... ..+.+.+++.. .+..++|.++... .+.+.+ .....+.++.+.+|+++. .+|
T Consensus 178 ~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~~~----~~~~~~-~~~~~~~~~~v~~f~~dm~~~l 250 (365)
T 3s2u_A 178 GRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGRQH----AEITAE-RYRTVAVEADVAPFISDMAAAY 250 (365)
T ss_dssp TSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCTTT----HHHHHH-HHHHTTCCCEEESCCSCHHHHH
T ss_pred CCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCccc----cccccc-eecccccccccccchhhhhhhh
Confidence 35678999999987432 22334455543 3456777766431 111211 223456788899999987 499
Q ss_pred CCCCcceEEecCCchhHHHHHhcCCCeeecccc----cchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCChH
Q 022811 177 SHPSVSVFLTHGGWNSILESVCGGVPIICWPFF----AEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGDKG 251 (291)
Q Consensus 177 ~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~----~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~ 251 (291)
..+++ +|||+|.+|+.|++++|+|+|.+|+- .+|..||+.+ ++.|+|+.+.. +++++.|.++|.++++|++
T Consensus 251 ~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l-~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~- 326 (365)
T 3s2u_A 251 AWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFL-VRSGAGRLLPQKSTGAAELAAQLSEVLMHPE- 326 (365)
T ss_dssp HHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHH-HTTTSEEECCTTTCCHHHHHHHHHHHHHCTH-
T ss_pred ccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHH-HHCCCEEEeecCCCCHHHHHHHHHHHHCCHH-
Confidence 99998 99999999999999999999999973 5899999999 67799999975 7899999999999999983
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 022811 252 KLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLH 288 (291)
Q Consensus 252 ~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~ 288 (291)
.++ +|++.+++... ..+.+.+.+.|.++.+
T Consensus 327 --~~~---~m~~~a~~~~~--~~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 327 --TLR---SMADQARSLAK--PEATRTVVDACLEVAR 356 (365)
T ss_dssp --HHH---HHHHHHHHTCC--TTHHHHHHHHHHHHC-
T ss_pred --HHH---HHHHHHHhcCC--ccHHHHHHHHHHHHHc
Confidence 322 23333333211 2345556666666643
No 22
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.63 E-value=6e-16 Score=132.07 Aligned_cols=136 Identities=13% Similarity=0.106 Sum_probs=96.7
Q ss_pred hhccCCCCceEEEEcCCcccCCHHHHHHH-----HHHHHhCC-CCEEEEEcCCCCCCccccccHHHHHHh---------c
Q 022811 97 WLNEKEPNSVAYVNYGSITVMTDEQMKEF-----AWGLANSG-HPFLWIVRPDMVTGDSAILSQEFYEEI---------K 161 (291)
Q Consensus 97 wl~~~~~~~vvyvs~GS~~~~~~~~~~~i-----~~~l~~~~-~~~lw~~~~~~~~~~~~~~~~~~~~~~---------~ 161 (291)
|+...+++++|||+.||... -.+.+..+ +++|.+.+ .+++|.++..... ......... |
T Consensus 21 ~~~~~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-----~~~~~~~~~~~~~~~~l~p 94 (224)
T 2jzc_A 21 MLEGIIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-----EFEHLVQERGGQRESQKIP 94 (224)
T ss_dssp ---CCCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-----CCCSHHHHHTCEECSCCCS
T ss_pred ccCCCCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-----hHHHHHHhhhccccccccc
Confidence 33444467899999999842 34444444 48887777 7899998865220 011111011 1
Q ss_pred -----------------C--CeEEeeccCcc-cccC-CCCcceEEecCCchhHHHHHhcCCCeeecccc----cchhHHH
Q 022811 162 -----------------D--RGMIANWCPQD-KVLS-HPSVSVFLTHGGWNSILESVCGGVPIICWPFF----AEQQTNC 216 (291)
Q Consensus 162 -----------------~--~~~v~~w~pq~-~iL~-h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~----~DQ~~na 216 (291)
. ++.+.+|+++. .+|. .+++ +|||||+||+.|++++|+|+|++|.. .||..||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA 172 (224)
T 2jzc_A 95 IDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIA 172 (224)
T ss_dssp SCTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHH
T ss_pred cccccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHH
Confidence 1 34566888887 5899 9998 99999999999999999999999984 4699999
Q ss_pred HHHHHHhCcceeeCCCCCHHHHHHHHHHH
Q 022811 217 RYASTTWGIGMEVNRDASREDIAALVKEI 245 (291)
Q Consensus 217 ~~v~~~~G~G~~l~~~~~~~~l~~ai~~v 245 (291)
+++ ++.|+++.+ +.+.|.++|+++
T Consensus 173 ~~l-~~~G~~~~~----~~~~L~~~i~~l 196 (224)
T 2jzc_A 173 DKF-VELGYVWSC----APTETGLIAGLR 196 (224)
T ss_dssp HHH-HHHSCCCEE----CSCTTTHHHHHH
T ss_pred HHH-HHCCCEEEc----CHHHHHHHHHHH
Confidence 999 567999876 456677777776
No 23
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.32 E-value=1.1e-11 Score=112.17 Aligned_cols=135 Identities=14% Similarity=0.100 Sum_probs=97.8
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCccccccHHHHHHhc-CCeEEeeccCc-ccccCC
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLANS--GHPFLWIVRPDMVTGDSAILSQEFYEEIK-DRGMIANWCPQ-DKVLSH 178 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~w~pq-~~iL~h 178 (291)
++++|++..|+... ......+++++... +.+++++++... ...+.+ .....+ +++.+.+|+++ ..+|..
T Consensus 182 ~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~----~~~l~~-~~~~~~~~~v~~~g~~~~~~~~~~~ 254 (364)
T 1f0k_A 182 GPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS----QQSVEQ-AYAEAGQPQHKVTEFIDDMAAAYAW 254 (364)
T ss_dssp SSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC----HHHHHH-HHHHTTCTTSEEESCCSCHHHHHHH
T ss_pred CCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch----HHHHHH-HHhhcCCCceEEecchhhHHHHHHh
Confidence 45678888888753 33344444555433 466677776541 111111 112222 57889999965 459999
Q ss_pred CCcceEEecCCchhHHHHHhcCCCeeecccc---cchhHHHHHHHHHhCcceeeCC-CCCHHHHHHHHHHHHcCC
Q 022811 179 PSVSVFLTHGGWNSILESVCGGVPIICWPFF---AEQQTNCRYASTTWGIGMEVNR-DASREDIAALVKEIMEGD 249 (291)
Q Consensus 179 ~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~---~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~ 249 (291)
+++ ||+++|.++++||+++|+|+|+.|.. .||..|++.+ ...|.|..+.. +.+.+++.++|.++ |+
T Consensus 255 ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~-~~~g~g~~~~~~d~~~~~la~~i~~l--~~ 324 (364)
T 1f0k_A 255 ADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPL-EKAGAAKIIEQPQLSVDAVANTLAGW--SR 324 (364)
T ss_dssp CSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHH-HHTTSEEECCGGGCCHHHHHHHHHTC--CH
T ss_pred CCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHH-HhCCcEEEeccccCCHHHHHHHHHhc--CH
Confidence 998 99999999999999999999999987 7999999998 55699998874 56699999999988 65
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.08 E-value=5.6e-10 Score=98.51 Aligned_cols=114 Identities=6% Similarity=0.025 Sum_probs=86.7
Q ss_pred CceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHH--hcCCeEEeeccCccc-ccCCCC
Q 022811 104 NSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEE--IKDRGMIANWCPQDK-VLSHPS 180 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~w~pq~~-iL~h~~ 180 (291)
.+.|+|++|..... .....++++|.... ++.++.+.... ..+.+... ...|+.+..|+++.. ++..++
T Consensus 157 ~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~~------~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aD 227 (282)
T 3hbm_A 157 KYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSNP------NLKKLQKFAKLHNNIRLFIDHENIAKLMNESN 227 (282)
T ss_dssp CEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTCT------THHHHHHHHHTCSSEEEEESCSCHHHHHHTEE
T ss_pred CCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCch------HHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCC
Confidence 46899999976432 35566777776543 56677665421 12222221 124888999999885 898999
Q ss_pred cceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeC
Q 022811 181 VSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVN 230 (291)
Q Consensus 181 v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~ 230 (291)
+ +||+|| +|+.|+++.|+|+|++|+..+|..||+.+ ++.|+++.+.
T Consensus 228 l--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~ 273 (282)
T 3hbm_A 228 K--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYK 273 (282)
T ss_dssp E--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECG
T ss_pred E--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcc
Confidence 8 999999 89999999999999999999999999999 6779999876
No 25
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.58 E-value=3.2e-07 Score=74.61 Aligned_cols=132 Identities=10% Similarity=0.033 Sum_probs=84.7
Q ss_pred eEEEEcCCcccCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCc---ccccCCCCc
Q 022811 106 VAYVNYGSITVMTDEQMKEFAWGLANS-GHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQ---DKVLSHPSV 181 (291)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq---~~iL~h~~v 181 (291)
.+++..|+... .+.+..+++++... +..++++-.... ......+...+...+++++.+.+|+++ ..++..+++
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~-~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi 100 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSK-GDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKG 100 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCT-TSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSE
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCcc-HHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCE
Confidence 35566777752 33455666666665 566665533221 111001111111234579999999997 358889998
Q ss_pred ceEEe---cCC-chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 182 SVFLT---HGG-WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 182 ~~fIt---HgG-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
+|. +.| ..+++||+++|+|+|+... ..+...+ +.-+.|..+ ..+.+++.++|.++++|+
T Consensus 101 --~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~--~~d~~~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 101 --LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV--NADVNEIIDAMKKVSKNP 163 (177)
T ss_dssp --EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE--CSCHHHHHHHHHHHHHCT
T ss_pred --EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe--CCCHHHHHHHHHHHHhCH
Confidence 554 234 4489999999999999754 3444445 444578777 468999999999999877
No 26
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.51 E-value=7.6e-08 Score=87.33 Aligned_cols=130 Identities=14% Similarity=0.142 Sum_probs=83.6
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHh-----CCCCEEEEEcCCCCCCccccccHHHHHHh--cCCeEEeeccCc---
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLAN-----SGHPFLWIVRPDMVTGDSAILSQEFYEEI--KDRGMIANWCPQ--- 172 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~-----~~~~~lw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~w~pq--- 172 (291)
++++++++.|...... +.+..+++++.. .+..+++..+.+ ..+.+.+.+.. .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~------~~~~~~l~~~~~~~~~v~~~g~~~~~~~ 276 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN------PNVREPVNRILGHVKNVILIDPQEYLPF 276 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC------HHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC------HHHHHHHHHHhhcCCCEEEeCCCCHHHH
Confidence 3567888888765322 234444444432 244555543322 01112222211 258888766664
Q ss_pred ccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 173 DKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 173 ~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
..+|..+++ ||+.+|. .++||+++|+|+|+.|..++... .+ +. |.|+.+.. +.+++.++|.++++|+
T Consensus 277 ~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~e---~v-~~-g~g~lv~~--d~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 277 VWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERPE---AV-TA-GTVRLVGT--DKQRIVEEVTRLLKDE 343 (384)
T ss_dssp HHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCHH---HH-HH-TSEEEECS--SHHHHHHHHHHHHHCH
T ss_pred HHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcch---hh-hC-CceEEeCC--CHHHHHHHHHHHHhCh
Confidence 358889998 9998854 48899999999999987444332 23 43 88888864 8999999999999887
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.28 E-value=2.8e-06 Score=76.80 Aligned_cols=129 Identities=14% Similarity=0.180 Sum_probs=81.9
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHh-----CCCCEEEEEcCCCCCCccccccHHHHHHh--cCCeEEeeccCc---
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLAN-----SGHPFLWIVRPDMVTGDSAILSQEFYEEI--KDRGMIANWCPQ--- 172 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~-----~~~~~lw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~w~pq--- 172 (291)
++++|+++.|...... .+..+++++.. .+..+++..+.+. .+.+.+.+.. .+++.+.++++.
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~------~~~~~l~~~~~~~~~v~~~g~~g~~~~ 268 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP------VVREAVFPVLKGVRNFVLLDPLEYGSM 268 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH------HHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH------HHHHHHHHHhccCCCEEEECCCCHHHH
Confidence 3457777777553221 23444454432 2455555444320 1112222211 257888855554
Q ss_pred ccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 173 DKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 173 ~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
..+|..+++ ||+.+| |.+.||+++|+|+|+.+...++... + + .|.|+.+. .+.++|.++|.++++|+
T Consensus 269 ~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~-~-~g~g~lv~--~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 269 AALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L-K-AGILKLAG--TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H-H-HTSEEECC--SCHHHHHHHHHHHHTCH
T ss_pred HHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h-c-CCceEECC--CCHHHHHHHHHHHHhCh
Confidence 468888888 999884 4466999999999998876666552 3 3 47888774 38999999999999987
No 28
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.12 E-value=1.1e-05 Score=74.22 Aligned_cols=130 Identities=11% Similarity=0.073 Sum_probs=81.2
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHh-----CCCCEEEEEcCCCCCCccccccHHHHHH--hcCCeEEeeccC---c
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLAN-----SGHPFLWIVRPDMVTGDSAILSQEFYEE--IKDRGMIANWCP---Q 172 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~-----~~~~~lw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~w~p---q 172 (291)
++++|+++.+-...... .+..+++++.. .+.++++.++.+. .+.+.+.+. ..+++.+.++++ .
T Consensus 229 ~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~------~~~~~l~~~~~~~~~v~~~~~lg~~~~ 301 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLNP------NVREPVNKLLKGVSNIVLIEPQQYLPF 301 (396)
T ss_dssp TSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCH------HHHHHHHHHTTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCCh------HHHHHHHHHHcCCCCEEEeCCCCHHHH
Confidence 45677776522222222 24555555543 3456666554320 111122221 235788877765 3
Q ss_pred ccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 173 DKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 173 ~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
..+++.+++ ||+-.| |.+.||.++|+|+|+..-..+++. .+ + .|.++.+. .+.++|.+++.++++|+
T Consensus 302 ~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e---~v-~-~G~~~lv~--~d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 302 VYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE---AV-A-AGTVKLVG--TNQQQICDALSLLLTDP 368 (396)
T ss_dssp HHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH---HH-H-HTSEEECT--TCHHHHHHHHHHHHHCH
T ss_pred HHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH---HH-H-cCceEEcC--CCHHHHHHHHHHHHcCH
Confidence 358889998 999988 556799999999999855555432 23 4 48776664 37999999999999887
No 29
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.09 E-value=0.00018 Score=68.63 Aligned_cols=83 Identities=12% Similarity=0.120 Sum_probs=61.4
Q ss_pred CCeEEeeccCcc---cccCCCCcceEEe---cCCchhHHHHHhcCCCeeecccccchhHH-HHHHHHHhCcceeeCCCCC
Q 022811 162 DRGMIANWCPQD---KVLSHPSVSVFLT---HGGWNSILESVCGGVPIICWPFFAEQQTN-CRYASTTWGIGMEVNRDAS 234 (291)
Q Consensus 162 ~~~~v~~w~pq~---~iL~h~~v~~fIt---HgG~~S~~Eal~~GvP~i~~P~~~DQ~~n-a~~v~~~~G~G~~l~~~~~ 234 (291)
+++.+.+++|+. .++..+++ ||. .|+.++++||+++|+|+|++|-..-.... +..+ ...|+...+.. +
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~~--~ 508 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNVA--D 508 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBCS--S
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhcC--C
Confidence 678899999844 47888888 652 26677899999999999998753211112 3344 55677776653 8
Q ss_pred HHHHHHHHHHHHcCC
Q 022811 235 REDIAALVKEIMEGD 249 (291)
Q Consensus 235 ~~~l~~ai~~vl~~~ 249 (291)
.+++.+++.++++|+
T Consensus 509 ~~~la~~i~~l~~~~ 523 (568)
T 2vsy_A 509 DAAFVAKAVALASDP 523 (568)
T ss_dssp HHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHhcCH
Confidence 899999999999987
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.09 E-value=5.7e-06 Score=76.39 Aligned_cols=130 Identities=10% Similarity=0.107 Sum_probs=81.6
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHh-----CCCCEEEEEcCCCCCCccccccHHHHH--HhcCCeEEeeccCc---
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLAN-----SGHPFLWIVRPDMVTGDSAILSQEFYE--EIKDRGMIANWCPQ--- 172 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~-----~~~~~lw~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~w~pq--- 172 (291)
++++++++.|....... .+..+++++.. .+.+|++..+++. .+.+.+.+ ...+++.+.+++++
T Consensus 223 ~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~~------~~~~~l~~~~~~~~~v~l~~~l~~~~~ 295 (403)
T 3ot5_A 223 DNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLNP------AVREKAMAILGGHERIHLIEPLDAIDF 295 (403)
T ss_dssp TCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSCH------HHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCCH------HHHHHHHHHhCCCCCEEEeCCCCHHHH
Confidence 45677777654321111 23445554432 3456776654320 11111111 12358888888863
Q ss_pred ccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 173 DKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 173 ~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
..++.++++ +|+-.|..+ .||.++|+|+|+.|-..+++. .+ + .|.|+.+. .+.++|.+++.+++.|+
T Consensus 296 ~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e---~v-~-~g~~~lv~--~d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 296 HNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE---GI-E-AGTLKLIG--TNKENLIKEALDLLDNK 362 (403)
T ss_dssp HHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH---HH-H-HTSEEECC--SCHHHHHHHHHHHHHCH
T ss_pred HHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh---he-e-CCcEEEcC--CCHHHHHHHHHHHHcCH
Confidence 348888887 998875333 699999999999976666554 23 4 48887775 38999999999999887
No 31
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.08 E-value=3.1e-05 Score=69.86 Aligned_cols=143 Identities=11% Similarity=0.123 Sum_probs=85.7
Q ss_pred CceEEEEcCCcc-cCCHHHHHHHHHHHHh--CCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCccc---ccC
Q 022811 104 NSVAYVNYGSIT-VMTDEQMKEFAWGLAN--SGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDK---VLS 177 (291)
Q Consensus 104 ~~vvyvs~GS~~-~~~~~~~~~i~~~l~~--~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~---iL~ 177 (291)
+..+++..|+.. ....+.+-+.+..+.+ .+..++++ +... ....+ ........+++.+.+|+|+.+ ++.
T Consensus 197 ~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g~---~~~~l-~~~~~~~~~~v~~~g~~~~~~~~~~~~ 271 (394)
T 3okp_A 197 TTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIV-GSGR---YESTL-RRLATDVSQNVKFLGRLEYQDMINTLA 271 (394)
T ss_dssp TCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEE-CCCT---THHHH-HHHTGGGGGGEEEEESCCHHHHHHHHH
T ss_pred CceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEE-cCch---HHHHH-HHHHhcccCeEEEcCCCCHHHHHHHHH
Confidence 345677778864 2233433333333433 24555444 4321 10111 111123357899999997554 788
Q ss_pred CCCcceEEe-----------cCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHH
Q 022811 178 HPSVSVFLT-----------HGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIM 246 (291)
Q Consensus 178 h~~v~~fIt-----------HgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl 246 (291)
.+++ +|. -|..+++.||+++|+|+|+.+..+ ....+ +. |.|..+. .-+.+++.++|.+++
T Consensus 272 ~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~----~~e~i-~~-~~g~~~~-~~d~~~l~~~i~~l~ 342 (394)
T 3okp_A 272 AADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGG----APETV-TP-ATGLVVE-GSDVDKLSELLIELL 342 (394)
T ss_dssp HCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTT----GGGGC-CT-TTEEECC-TTCHHHHHHHHHHHH
T ss_pred hCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCCC----hHHHH-hc-CCceEeC-CCCHHHHHHHHHHHH
Confidence 8888 665 455678999999999999977532 22233 33 4666665 357999999999999
Q ss_pred cCChH-HHHHHHHHH
Q 022811 247 EGDKG-KLIRQNVQD 260 (291)
Q Consensus 247 ~~~~~-~~~r~~a~~ 260 (291)
.|++- +.+.+++++
T Consensus 343 ~~~~~~~~~~~~~~~ 357 (394)
T 3okp_A 343 DDPIRRAAMGAAGRA 357 (394)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHH
Confidence 97732 334444443
No 32
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.04 E-value=6.3e-05 Score=67.37 Aligned_cols=144 Identities=13% Similarity=0.188 Sum_probs=89.8
Q ss_pred CceEEEEcCCcccCCHHHHHHHHHHHHhCCC----C-EEEEEcCCCCCCccccccHHHHHHh--cCCeEEeeccCcc-cc
Q 022811 104 NSVAYVNYGSITVMTDEQMKEFAWGLANSGH----P-FLWIVRPDMVTGDSAILSQEFYEEI--KDRGMIANWCPQD-KV 175 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~----~-~lw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~w~pq~-~i 175 (291)
+..+++..|+... .+.+..+++++..... . -++.++... ...+ ....... .+++.+.++..+. .+
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~----~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~ 267 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK----PRKF-EALAEKLGVRSNVHFFSGRNDVSEL 267 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC----CHHH-HHHHHHHTCGGGEEEESCCSCHHHH
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC----HHHH-HHHHHHcCCCCcEEECCCcccHHHH
Confidence 4456677787652 2344555666655421 1 244455331 1111 1122222 4688888886554 48
Q ss_pred cCCCCcceEEe----cCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCChH
Q 022811 176 LSHPSVSVFLT----HGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGDKG 251 (291)
Q Consensus 176 L~h~~v~~fIt----HgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~ 251 (291)
+..+++ +|. -|..++++||+++|+|+|+.+.. .+...+ +.-+.|..+....+.+++.++|.++++|++-
T Consensus 268 ~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i-~~~~~g~~~~~~~~~~~l~~~i~~l~~~~~~ 340 (374)
T 2iw1_A 268 MAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYI-ADANCGTVIAEPFSQEQLNEVLRKALTQSPL 340 (374)
T ss_dssp HHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHH-HHHTCEEEECSSCCHHHHHHHHHHHHHCHHH
T ss_pred HHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCC----Cchhhh-ccCCceEEeCCCCCHHHHHHHHHHHHcChHH
Confidence 888888 664 45678899999999999998753 334455 5558888886446899999999999987732
Q ss_pred -HHHHHHHHHH
Q 022811 252 -KLIRQNVQDW 261 (291)
Q Consensus 252 -~~~r~~a~~l 261 (291)
..+.+++++.
T Consensus 341 ~~~~~~~~~~~ 351 (374)
T 2iw1_A 341 RMAWAENARHY 351 (374)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 3344444443
No 33
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.04 E-value=1.1e-05 Score=72.68 Aligned_cols=130 Identities=15% Similarity=0.157 Sum_probs=80.8
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHh-----CCCCEEEEEcCCCCCCccccccHHHHHHhc--CCeEEeeccCcc--
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLAN-----SGHPFLWIVRPDMVTGDSAILSQEFYEEIK--DRGMIANWCPQD-- 173 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~-----~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~w~pq~-- 173 (291)
++++++++.|...... +.+..+++++.. .+..+++ .... . ..+.+.+.+... +++.+.+++++.
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~---~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 276 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHM---N-PVVRETANDILGDYGRIHLIEPLDVIDF 276 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCS---C-HHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCC---C-HHHHHHHHHHhhccCCEEEeCCCCHHHH
Confidence 3556777777754321 334555555543 2344433 3210 0 111122222122 688887777654
Q ss_pred -cccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 174 -KVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 174 -~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.+|..+++ ||+.+| +.++||+++|+|+|+.+..+... ..+ + .|.|..+.. +.+++.++|.++++|+
T Consensus 277 ~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~---e~v-~-~g~g~~v~~--d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 277 HNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP---EGI-E-AGTLKLAGT--DEETIFSLADELLSDK 343 (375)
T ss_dssp HHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH---HHH-H-TTSEEECCS--CHHHHHHHHHHHHHCH
T ss_pred HHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc---eee-c-CCceEEcCC--CHHHHHHHHHHHHhCh
Confidence 58889998 888874 55889999999999986433332 223 4 378888753 8999999999999887
No 34
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.04 E-value=0.00027 Score=63.97 Aligned_cols=93 Identities=13% Similarity=0.108 Sum_probs=63.9
Q ss_pred cCCeEEeeccCcc-cccCCCCcceEE----ecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCH
Q 022811 161 KDRGMIANWCPQD-KVLSHPSVSVFL----THGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASR 235 (291)
Q Consensus 161 ~~~~~v~~w~pq~-~iL~h~~v~~fI----tHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 235 (291)
.+++.+.++..+. .+|..+++ +| .-|..++++||+++|+|+|+.+..+ ....+ +.-+.|..+. .-+.
T Consensus 266 ~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v-~~~~~g~~~~-~~d~ 337 (394)
T 2jjm_A 266 EDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVI-QHGDTGYLCE-VGDT 337 (394)
T ss_dssp GGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTC-CBTTTEEEEC-TTCH
T ss_pred CCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHh-hcCCceEEeC-CCCH
Confidence 3577777775544 48888998 66 4456779999999999999987532 22223 3335677765 3578
Q ss_pred HHHHHHHHHHHcCChH-HHHHHHHHHH
Q 022811 236 EDIAALVKEIMEGDKG-KLIRQNVQDW 261 (291)
Q Consensus 236 ~~l~~ai~~vl~~~~~-~~~r~~a~~l 261 (291)
+++.++|.++++|++. ..+.+++++.
T Consensus 338 ~~la~~i~~l~~~~~~~~~~~~~~~~~ 364 (394)
T 2jjm_A 338 TGVADQAIQLLKDEELHRNMGERARES 364 (394)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 9999999999988732 3344444443
No 35
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.03 E-value=0.00014 Score=72.09 Aligned_cols=142 Identities=14% Similarity=0.202 Sum_probs=95.1
Q ss_pred CCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHH--hcCCeEEeeccCccc---cc
Q 022811 102 EPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEE--IKDRGMIANWCPQDK---VL 176 (291)
Q Consensus 102 ~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~w~pq~~---iL 176 (291)
++..|||.||.+....+++.+..-++-|++.+-.++|..+.+... ...+-..+... .++++.+.+..|..+ .+
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~--~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~ 597 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG--EPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRG 597 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG--HHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHG
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH--HHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHh
Confidence 346799999999989999999999999999999999998754211 11111111110 146788888888655 44
Q ss_pred CCCCcceEEe---cCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 177 SHPSVSVFLT---HGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 177 ~h~~v~~fIt---HgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
...++ |+- .+|.+|+.|||++|||+|++|-..=--..+..+-..+|+...+. -+.++-.+...++-+|.
T Consensus 598 ~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia--~~~~~Y~~~a~~la~d~ 669 (723)
T 4gyw_A 598 QLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIA--KNRQEYEDIAVKLGTDL 669 (723)
T ss_dssp GGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBC--SSHHHHHHHHHHHHHCH
T ss_pred CCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCccccc--CCHHHHHHHHHHHhcCH
Confidence 55666 765 88999999999999999999952222223333336678777664 35565444444566666
No 36
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=97.95 E-value=0.00014 Score=66.70 Aligned_cols=96 Identities=13% Similarity=0.106 Sum_probs=68.9
Q ss_pred cCCeEEeeccCcc---cccCCCCcceEEec----CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCC
Q 022811 161 KDRGMIANWCPQD---KVLSHPSVSVFLTH----GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDA 233 (291)
Q Consensus 161 ~~~~~v~~w~pq~---~iL~h~~v~~fItH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 233 (291)
.+++.+.+|+|+. .+|..+++ ||.- |..++++||+++|+|+|+.+. ......+ +.-+.|..+. .-
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~-~~ 376 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLVD-GH 376 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEES-SC
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEECC-CC
Confidence 4689999999864 48888888 6643 335689999999999999764 3344444 4445677775 45
Q ss_pred CHHHHHHHHHHHHcCChH-HHHHHHHHHHHHH
Q 022811 234 SREDIAALVKEIMEGDKG-KLIRQNVQDWRKK 264 (291)
Q Consensus 234 ~~~~l~~ai~~vl~~~~~-~~~r~~a~~l~~~ 264 (291)
+.+++.++|.++++|++. ..+.+++++....
T Consensus 377 d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 377 SPHAWADALATLLDDDETRIRMGEDAVEHART 408 (438)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 789999999999998742 4455566555444
No 37
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=97.87 E-value=0.0003 Score=63.58 Aligned_cols=127 Identities=14% Similarity=0.106 Sum_probs=81.4
Q ss_pred eEEEEcCCc-cc-CCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCccccccHHHHH---HhcCCeEEeeccCcc---cc
Q 022811 106 VAYVNYGSI-TV-MTDEQMKEFAWGLANS--GHPFLWIVRPDMVTGDSAILSQEFYE---EIKDRGMIANWCPQD---KV 175 (291)
Q Consensus 106 vvyvs~GS~-~~-~~~~~~~~i~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~w~pq~---~i 175 (291)
.+++..|+. .. ...+.+-+.+..+.+. +..++ .++... . +.+.+ ...+++.+.+|+++. .+
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~-i~G~~~-------~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~ 279 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEIL-IVGRGD-------E-DELREQAGDLAGHLRFLGQVDDATKASA 279 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEE-EESCSC-------H-HHHHHHTGGGGGGEEECCSCCHHHHHHH
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEE-EEcCCc-------H-HHHHHHHHhccCcEEEEecCCHHHHHHH
Confidence 466677877 42 2334443344444332 34444 344331 1 22222 224688899999975 58
Q ss_pred cCCCCcceEEec----CC-chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 176 LSHPSVSVFLTH----GG-WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 176 L~h~~v~~fItH----gG-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
|..+++ +|.- -| .++++||+++|+|+|+.+. ......+ +.-+.|..+. .-+.+++.++|.++++++
T Consensus 280 ~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i-~~~~~g~~~~-~~d~~~l~~~i~~l~~~~ 350 (406)
T 2gek_A 280 MRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVL-ADGDAGRLVP-VDDADGMAAALIGILEDD 350 (406)
T ss_dssp HHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHH-TTTTSSEECC-TTCHHHHHHHHHHHHHCH
T ss_pred HHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHh-cCCCceEEeC-CCCHHHHHHHHHHHHcCH
Confidence 889998 5533 33 4589999999999999865 4455555 5446777775 357899999999999877
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=97.82 E-value=0.00035 Score=63.72 Aligned_cols=79 Identities=11% Similarity=0.001 Sum_probs=59.7
Q ss_pred cCCeEEeeccC---c--c-cccCCCCcceEEecC----CchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeC
Q 022811 161 KDRGMIANWCP---Q--D-KVLSHPSVSVFLTHG----GWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVN 230 (291)
Q Consensus 161 ~~~~~v~~w~p---q--~-~iL~h~~v~~fItHg----G~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~ 230 (291)
.+++.+.+|++ + . .++..+++ ||.-. ..++++||+++|+|+|+.+. ..+...+ +.-+.|..+.
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEEC
Confidence 46889998876 2 2 37888888 66543 45689999999999999764 3344444 4445787775
Q ss_pred CCCCHHHHHHHHHHHHcCC
Q 022811 231 RDASREDIAALVKEIMEGD 249 (291)
Q Consensus 231 ~~~~~~~l~~ai~~vl~~~ 249 (291)
+.+++.++|.++++|+
T Consensus 365 ---d~~~la~~i~~ll~~~ 380 (416)
T 2x6q_A 365 ---DANEAVEVVLYLLKHP 380 (416)
T ss_dssp ---SHHHHHHHHHHHHHCH
T ss_pred ---CHHHHHHHHHHHHhCH
Confidence 8999999999999887
No 39
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.81 E-value=0.00027 Score=68.22 Aligned_cols=139 Identities=10% Similarity=0.057 Sum_probs=91.0
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEE--cCCCCCCccccccHHH-HHHhcCCeEEeeccCccc---ccCC
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIV--RPDMVTGDSAILSQEF-YEEIKDRGMIANWCPQDK---VLSH 178 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~--~~~~~~~~~~~~~~~~-~~~~~~~~~v~~w~pq~~---iL~h 178 (291)
.++|.+|++.....++.++..++-+.+.+..++|.. +... +....+...+ ...+.+++.+.+.+|..+ .+..
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~--g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~ 518 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN--GITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHN 518 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC--GGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHT
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc--hhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhc
Confidence 688999998888888888888888888887788753 3211 0001111111 112446788888888665 4477
Q ss_pred CCcceEEe---cCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCccee-eCCCCCHHHHHHHHHHHHcCC
Q 022811 179 PSVSVFLT---HGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGME-VNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 179 ~~v~~fIt---HgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~-l~~~~~~~~l~~ai~~vl~~~ 249 (291)
+++ |+. .+|.+|++||+++|||+|+.+--.=--..+..+-...|+... +. -+.++..+...++.+|+
T Consensus 519 aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA--~d~eeYv~~Av~La~D~ 589 (631)
T 3q3e_A 519 CDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA--NTVDEYVERAVRLAENH 589 (631)
T ss_dssp CSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE--SSHHHHHHHHHHHHHCH
T ss_pred CcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec--CCHHHHHHHHHHHhCCH
Confidence 777 643 378899999999999999998532111222222245677652 43 36788777777888887
No 40
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.78 E-value=0.00012 Score=58.02 Aligned_cols=141 Identities=11% Similarity=0.152 Sum_probs=79.7
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHHhC----CCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCccc---ccC
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLANS----GHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDK---VLS 177 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~~~----~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~---iL~ 177 (291)
+++++..|+... .+.+..+++++... +..++ .++... ....+ .....+.+.++.+ +|+|+.+ ++.
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~-i~G~g~---~~~~~-~~~~~~~~~~v~~-g~~~~~~~~~~~~ 73 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLL-LKGKGP---DEKKI-KLLAQKLGVKAEF-GFVNSNELLEILK 73 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEE-EECCST---THHHH-HHHHHHHTCEEEC-CCCCHHHHHHHHT
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEE-EEeCCc---cHHHH-HHHHHHcCCeEEE-eecCHHHHHHHHH
Confidence 467777888752 23455566666554 23333 334321 11111 2222333446777 9998653 788
Q ss_pred CCCcceEEe----cCCchhHHHHHhcCC-CeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCChH-
Q 022811 178 HPSVSVFLT----HGGWNSILESVCGGV-PIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGDKG- 251 (291)
Q Consensus 178 h~~v~~fIt----HgG~~S~~Eal~~Gv-P~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~- 251 (291)
.+++ +|. -|...++.||+++|+ |+|+....+. ....+ ..-+. .+. .-+.+++.++|.+++++++-
T Consensus 74 ~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~-~~~~~--~~~-~~~~~~l~~~i~~l~~~~~~~ 144 (166)
T 3qhp_A 74 TCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFA-LDERS--LFE-PNNAKDLSAKIDWWLENKLER 144 (166)
T ss_dssp TCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGC-SSGGG--EEC-TTCHHHHHHHHHHHHHCHHHH
T ss_pred hCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhc-cCCce--EEc-CCCHHHHHHHHHHHHhCHHHH
Confidence 9998 554 234569999999996 9999332111 11111 22122 332 45899999999999998732
Q ss_pred HHHHHHHHHHH
Q 022811 252 KLIRQNVQDWR 262 (291)
Q Consensus 252 ~~~r~~a~~l~ 262 (291)
+.+.+++++..
T Consensus 145 ~~~~~~~~~~~ 155 (166)
T 3qhp_A 145 ERMQNEYAKSA 155 (166)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34555555443
No 41
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=97.75 E-value=0.00016 Score=64.17 Aligned_cols=127 Identities=9% Similarity=0.065 Sum_probs=81.9
Q ss_pred EEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcc---cccCCCCcce
Q 022811 107 AYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQD---KVLSHPSVSV 183 (291)
Q Consensus 107 vyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~---~iL~h~~v~~ 183 (291)
+++..|+.. ..+....+++++...+.+++++ +... .. ..-..+....++++.+.+|+++. .++..+++-+
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~---~~-~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv~v 236 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAW---EP-EYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVL 236 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCC---CH-HHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSEEE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCcc---cH-HHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCEEE
Confidence 455567765 2334455666666557776554 4321 11 11122333445899999999976 5888999832
Q ss_pred EEec------------CCchhHHHHHhcCCCeeecccccchhHHHHHHHHH--hCcceeeCCCCCHHHHHHHHHHHHc
Q 022811 184 FLTH------------GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTT--WGIGMEVNRDASREDIAALVKEIME 247 (291)
Q Consensus 184 fItH------------gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~--~G~G~~l~~~~~~~~l~~ai~~vl~ 247 (291)
+-++ |-.++++||+++|+|+|+.... .+...+ +. -+.|..++ . +.+++.++|.++++
T Consensus 237 ~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~-~~~~~~~g~~~~-~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 237 AMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIV-PSVGEVVGYGTD-F-APDEARRTLAGLPA 307 (342)
T ss_dssp ECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHG-GGGEEECCSSSC-C-CHHHHHHHHHTSCC
T ss_pred ECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHh-cccCCCceEEcC-C-CHHHHHHHHHHHHH
Confidence 2232 2246899999999999998752 344444 44 35777776 4 89999999999886
No 42
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=97.75 E-value=0.0006 Score=62.08 Aligned_cols=145 Identities=12% Similarity=0.097 Sum_probs=88.0
Q ss_pred eEEEEcCCcc-c-CCHHHHHHHHHHHHh----CCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCccc---cc
Q 022811 106 VAYVNYGSIT-V-MTDEQMKEFAWGLAN----SGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDK---VL 176 (291)
Q Consensus 106 vvyvs~GS~~-~-~~~~~~~~i~~~l~~----~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~---iL 176 (291)
.+++..|+.. . ...+.+-+.+..+.+ .+.++++ ++.... .....-.......++++.+.+|+++.+ ++
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i-~G~g~~--~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 328 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFII-IGKGDP--ELEGWARSLEEKHGNVKVITEMLSREFVRELY 328 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEE-ECCCCH--HHHHHHHHHHHHCTTEEEECSCCCHHHHHHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEE-EcCCCh--hHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHH
Confidence 6777788876 3 344555555555544 3444443 343210 000111222233444445678898864 78
Q ss_pred CCCCcceEEec----CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHc-CChH
Q 022811 177 SHPSVSVFLTH----GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIME-GDKG 251 (291)
Q Consensus 177 ~h~~v~~fItH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~-~~~~ 251 (291)
..+++ +|.- |-.++++||+++|+|+|+... ......+ +. |.|..+. .-+.+++.++|.+++. +++.
T Consensus 329 ~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~-~~-~~g~~~~-~~d~~~la~~i~~ll~~~~~~ 399 (439)
T 3fro_A 329 GSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVK-AGDPGELANAILKALELSRSD 399 (439)
T ss_dssp TTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC-CT-TTCEEEC-TTCHHHHHHHHHHHHHHTTTT
T ss_pred HHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE-Ec-CceEEeC-CCCHHHHHHHHHHHHhcCHHH
Confidence 89998 5532 335789999999999999754 3344444 33 6888876 4588999999999998 6632
Q ss_pred -HHHHHHHHHHH
Q 022811 252 -KLIRQNVQDWR 262 (291)
Q Consensus 252 -~~~r~~a~~l~ 262 (291)
..+.+++++..
T Consensus 400 ~~~~~~~~~~~~ 411 (439)
T 3fro_A 400 LSKFRENCKKRA 411 (439)
T ss_dssp THHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 45555555544
No 43
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.67 E-value=0.00093 Score=54.36 Aligned_cols=78 Identities=13% Similarity=0.107 Sum_probs=58.1
Q ss_pred CeEE-eeccCcc---cccCCCCcceEEecC----CchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCC
Q 022811 163 RGMI-ANWCPQD---KVLSHPSVSVFLTHG----GWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDAS 234 (291)
Q Consensus 163 ~~~v-~~w~pq~---~iL~h~~v~~fItHg----G~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 234 (291)
++.+ .+|+++. .++..+++ +|.-. ...+++||+++|+|+|+... ......+ .-+.|..+. .-+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~--~~~~g~~~~-~~~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII--TNETGILVK-AGD 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC--CTTTCEEEC-TTC
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc--CCCceEEec-CCC
Confidence 8888 9999844 48889988 55432 24689999999999999864 2333333 235677775 357
Q ss_pred HHHHHHHHHHHHc-CC
Q 022811 235 REDIAALVKEIME-GD 249 (291)
Q Consensus 235 ~~~l~~ai~~vl~-~~ 249 (291)
.+++.++|.++++ |+
T Consensus 167 ~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 167 PGELANAILKALELSR 182 (200)
T ss_dssp HHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHHhcCH
Confidence 8999999999998 87
No 44
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=97.64 E-value=5.6e-05 Score=69.33 Aligned_cols=128 Identities=13% Similarity=0.059 Sum_probs=82.8
Q ss_pred CceEEEEcCCcccCC-HHHHHHHHHHHHhC----CCCEEEEEcCCCCCCccccccHHHHHH---h--cCCeEEeeccC--
Q 022811 104 NSVAYVNYGSITVMT-DEQMKEFAWGLANS----GHPFLWIVRPDMVTGDSAILSQEFYEE---I--KDRGMIANWCP-- 171 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~-~~~~~~i~~~l~~~----~~~~lw~~~~~~~~~~~~~~~~~~~~~---~--~~~~~v~~w~p-- 171 (291)
++++++++|...... .+.+..+++++... +.+|++...+. ..+.+.+. . .+++.+.+.++
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~--------~~~~l~~~~~~~~~~~~v~l~~~lg~~ 274 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR--------TKKRLEDLEGFKELGDKIRFLPAFSFT 274 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH--------HHHHHHTSGGGGGTGGGEEECCCCCHH
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH--------HHHHHHHHHHHhcCCCCEEEEcCCCHH
Confidence 568888887754322 24556666666532 56777765421 11111111 1 25777765554
Q ss_pred -cccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 172 -QDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 172 -q~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
...+++++++ +||-.|. .+.||.+.|+|+|+++-..+-+. + + + .|.++.+. .+.++|.+++.++++|+
T Consensus 275 ~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e-~--v-~-~G~~~lv~--~d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 275 DYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE-G--M-D-AGTLIMSG--FKAERVLQAVKTITEEH 343 (385)
T ss_dssp HHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH-H--H-H-HTCCEECC--SSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh-h--h-h-cCceEEcC--CCHHHHHHHHHHHHhCh
Confidence 3458889998 9999876 46999999999999987544221 2 4 4 48877764 47999999999999887
No 45
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.52 E-value=0.0016 Score=59.08 Aligned_cols=76 Identities=12% Similarity=0.107 Sum_probs=53.2
Q ss_pred eEEeeccCccc---ccCCCCcceEEe--c--CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCc-----------
Q 022811 164 GMIANWCPQDK---VLSHPSVSVFLT--H--GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGI----------- 225 (291)
Q Consensus 164 ~~v~~w~pq~~---iL~h~~v~~fIt--H--gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~----------- 225 (291)
+.+.+|+|+.+ +|..+++ ||. + |...+++||+++|+|+|+... ......+ +. |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~-~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYF-SG-DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHS-CT-TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHH-cc-Ccccccccccccc
Confidence 56679998543 7888888 553 2 334589999999999999754 2334333 22 22
Q ss_pred -----ce--eeCCCCCHHHHHHHHHHHHcCC
Q 022811 226 -----GM--EVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 226 -----G~--~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
|. .+. .-+.+++.++| +++.|+
T Consensus 328 ~~~~~G~~gl~~-~~d~~~la~~i-~l~~~~ 356 (413)
T 3oy2_A 328 VDDRDGIGGIEG-IIDVDDLVEAF-TFFKDE 356 (413)
T ss_dssp CTTTCSSCCEEE-ECCHHHHHHHH-HHTTSH
T ss_pred cccccCcceeeC-CCCHHHHHHHH-HHhcCH
Confidence 55 554 34899999999 999887
No 46
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=97.42 E-value=0.00097 Score=62.47 Aligned_cols=92 Identities=15% Similarity=0.119 Sum_probs=64.9
Q ss_pred cCCeEEeeccCccc---ccCCC----CcceEEec----CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceee
Q 022811 161 KDRGMIANWCPQDK---VLSHP----SVSVFLTH----GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEV 229 (291)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~h~----~v~~fItH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l 229 (291)
.+++.+.+++|+.+ ++..+ ++ ||.- |-.++++||+++|+|+|+... ......+ +.-..|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEe
Confidence 46899999997653 78788 77 6532 334689999999999999864 2344444 443478887
Q ss_pred CCCCCHHHHHHHHHHHHcCChH-HHHHHHHHH
Q 022811 230 NRDASREDIAALVKEIMEGDKG-KLIRQNVQD 260 (291)
Q Consensus 230 ~~~~~~~~l~~ai~~vl~~~~~-~~~r~~a~~ 260 (291)
. .-+.+++.++|.++++|++- ..+.+++++
T Consensus 407 ~-~~d~~~la~~i~~ll~~~~~~~~~~~~a~~ 437 (499)
T 2r60_A 407 D-PEDPEDIARGLLKAFESEETWSAYQEKGKQ 437 (499)
T ss_dssp C-TTCHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred C-CCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 5 35789999999999998732 334444443
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.26 E-value=0.00052 Score=62.40 Aligned_cols=96 Identities=15% Similarity=0.270 Sum_probs=66.3
Q ss_pred CeEEeeccCcc-cccCCCCcceEEe---c--CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHH
Q 022811 163 RGMIANWCPQD-KVLSHPSVSVFLT---H--GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASRE 236 (291)
Q Consensus 163 ~~~v~~w~pq~-~iL~h~~v~~fIt---H--gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 236 (291)
++.+.++..+. .+++.+++ |+. . +|..+++||+++|+|+|+-|...+.......+ ...|.++... +.+
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~~---d~~ 334 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEVK---NET 334 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEECC---SHH
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEeC---CHH
Confidence 45555554444 37888887 543 1 24478999999999999877666666655544 2347666553 789
Q ss_pred HHHHHHHHHHcCChH-HHHHHHHHHHHHHH
Q 022811 237 DIAALVKEIMEGDKG-KLIRQNVQDWRKKA 265 (291)
Q Consensus 237 ~l~~ai~~vl~~~~~-~~~r~~a~~l~~~~ 265 (291)
++.++|.++++| +. +.|.+++++..+.-
T Consensus 335 ~La~ai~~ll~d-~~r~~mg~~ar~~~~~~ 363 (374)
T 2xci_A 335 ELVTKLTELLSV-KKEIKVEEKSREIKGCY 363 (374)
T ss_dssp HHHHHHHHHHHS-CCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhH-HHHHHHHHHHHHHHHhc
Confidence 999999999987 43 56878877765543
No 48
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.20 E-value=0.00039 Score=62.62 Aligned_cols=110 Identities=15% Similarity=0.179 Sum_probs=76.6
Q ss_pred CeEEeeccCccc---ccCCCCcceEEecCC---------chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeC
Q 022811 163 RGMIANWCPQDK---VLSHPSVSVFLTHGG---------WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVN 230 (291)
Q Consensus 163 ~~~v~~w~pq~~---iL~h~~v~~fItHgG---------~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~ 230 (291)
|+.+.+|+|..+ +|+.++++++.+-+. -+-+.|++++|+|+|+.+ ...++..+ ++.++|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 899999999876 455566654442222 245789999999999876 34566666 6679999986
Q ss_pred CCCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 022811 231 RDASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKE 285 (291)
Q Consensus 231 ~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~ 285 (291)
+.+++.+++..+. .++.+.|++|+++.++.++. |--..+.+.+.+.+
T Consensus 290 ---~~~e~~~~i~~l~-~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 ---DVEEAIMKVKNVN-EDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQ 336 (339)
T ss_dssp ---SHHHHHHHHHHCC-HHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHH
Confidence 4788888888754 33456899999998888765 33444445444443
No 49
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=96.95 E-value=0.014 Score=54.15 Aligned_cols=133 Identities=7% Similarity=-0.059 Sum_probs=78.9
Q ss_pred eEEEEcCCccc-CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeE-EeeccCcc--cccCCCCc
Q 022811 106 VAYVNYGSITV-MTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGM-IANWCPQD--KVLSHPSV 181 (291)
Q Consensus 106 vvyvs~GS~~~-~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~w~pq~--~iL~h~~v 181 (291)
.+++..|.... ...+.+-+.+..+.+.+.+++++-.... .....-..+....++++. +.++.... .++..+++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~---~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv 368 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDV---ALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDA 368 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCH---HHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSE
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCch---HHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCE
Confidence 46677788753 2334443434444444666655433210 000111122233456786 67773332 47888888
Q ss_pred ceEEec----CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHh---------CcceeeCCCCCHHHHHHHHHHHH--
Q 022811 182 SVFLTH----GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTW---------GIGMEVNRDASREDIAALVKEIM-- 246 (291)
Q Consensus 182 ~~fItH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~~~l~~ai~~vl-- 246 (291)
||.- |-.++++||+++|+|+|+... ......+ +.- +.|..+. .-+.+++.++|.+++
T Consensus 369 --~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~-~~d~~~la~~i~~ll~~ 440 (485)
T 1rzu_A 369 --IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQFS-PVTLDGLKQAIRRTVRY 440 (485)
T ss_dssp --EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEES-SCSHHHHHHHHHHHHHH
T ss_pred --EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEeC-CCCHHHHHHHHHHHHHH
Confidence 6532 335689999999999999764 3344444 332 4777775 457899999999999
Q ss_pred -cCC
Q 022811 247 -EGD 249 (291)
Q Consensus 247 -~~~ 249 (291)
.|+
T Consensus 441 ~~~~ 444 (485)
T 1rzu_A 441 YHDP 444 (485)
T ss_dssp HTCH
T ss_pred hCCH
Confidence 666
No 50
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=96.77 E-value=0.017 Score=53.49 Aligned_cols=134 Identities=10% Similarity=-0.032 Sum_probs=77.9
Q ss_pred ceEEEEcCCcc-cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeE-EeeccCcc--cccCCCC
Q 022811 105 SVAYVNYGSIT-VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGM-IANWCPQD--KVLSHPS 180 (291)
Q Consensus 105 ~vvyvs~GS~~-~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~w~pq~--~iL~h~~ 180 (291)
..+++..|... ....+.+-+.+..+.+.+.+++++-.... .....-..+....++++. +.++.... .++..++
T Consensus 292 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~---~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ad 368 (485)
T 2qzs_A 292 VPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDP---VLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGAD 368 (485)
T ss_dssp SCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECH---HHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCS
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCch---HHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCC
Confidence 35566667764 22334444444444444666555433210 000011122223446785 67773332 4788888
Q ss_pred cceEEec----CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHh---------CcceeeCCCCCHHHHHHHHHHHH-
Q 022811 181 VSVFLTH----GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTW---------GIGMEVNRDASREDIAALVKEIM- 246 (291)
Q Consensus 181 v~~fItH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~~~l~~ai~~vl- 246 (291)
+ ||.- |..++++||+++|+|+|+... ......+ +.- +.|..+. .-+.+++.++|.+++
T Consensus 369 v--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~-~~d~~~la~~i~~ll~ 440 (485)
T 2qzs_A 369 V--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVFE-DSNAWSLLRAIRRAFV 440 (485)
T ss_dssp E--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEEC-SSSHHHHHHHHHHHHH
T ss_pred E--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEEC-CCCHHHHHHHHHHHHH
Confidence 8 5532 335688999999999999854 2344444 332 4777775 457899999999999
Q ss_pred --cCC
Q 022811 247 --EGD 249 (291)
Q Consensus 247 --~~~ 249 (291)
.|+
T Consensus 441 ~~~~~ 445 (485)
T 2qzs_A 441 LWSRP 445 (485)
T ss_dssp HHTSH
T ss_pred HcCCH
Confidence 566
No 51
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=96.23 E-value=0.047 Score=54.59 Aligned_cols=81 Identities=9% Similarity=0.063 Sum_probs=54.1
Q ss_pred cCCeEEeeccC----ccccc---C-CCCcceEEec----CCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCccee
Q 022811 161 KDRGMIANWCP----QDKVL---S-HPSVSVFLTH----GGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGME 228 (291)
Q Consensus 161 ~~~~~v~~w~p----q~~iL---~-h~~v~~fItH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~ 228 (291)
.+++.+.++.+ +.++. . .+++ ||.- +-..+++||+++|+|+|+... ......+ +.-+.|..
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd~----GG~~EiV-~dg~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEII-VHGKSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEESS----BTHHHHC-CBTTTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeCC----CChHHHH-ccCCcEEE
Confidence 46777877543 34433 3 4566 6632 335689999999999999643 3344444 44357887
Q ss_pred eCCCCCHHHHHHHHHHHH----cCC
Q 022811 229 VNRDASREDIAALVKEIM----EGD 249 (291)
Q Consensus 229 l~~~~~~~~l~~ai~~vl----~~~ 249 (291)
++ .-+.+++.++|.+++ .|+
T Consensus 712 v~-p~D~e~LA~aI~~lL~~Ll~d~ 735 (816)
T 3s28_A 712 ID-PYHGDQAADTLADFFTKCKEDP 735 (816)
T ss_dssp EC-TTSHHHHHHHHHHHHHHHHHCT
T ss_pred eC-CCCHHHHHHHHHHHHHHhccCH
Confidence 76 357899999997776 777
No 52
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=94.38 E-value=0.046 Score=49.87 Aligned_cols=75 Identities=11% Similarity=0.061 Sum_probs=57.6
Q ss_pred cCCeEEeeccCccc---ccCCCCcceEEe--c--CCchhHHHHH-------hcCCCeeecccccchhHHHHHHHHHhCcc
Q 022811 161 KDRGMIANWCPQDK---VLSHPSVSVFLT--H--GGWNSILESV-------CGGVPIICWPFFAEQQTNCRYASTTWGIG 226 (291)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~h~~v~~fIt--H--gG~~S~~Eal-------~~GvP~i~~P~~~DQ~~na~~v~~~~G~G 226 (291)
.+++.+.+++|+.+ ++..+++ ||. + |-.++++||+ ++|+|+|+... + ..-..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcce
Confidence 47899999998653 7888998 553 2 2345789999 99999999865 4 343567
Q ss_pred ee-eCCCCCHHHHHHHHHHHHcCC
Q 022811 227 ME-VNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 227 ~~-l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.. +. .-+.+++.++|.++++++
T Consensus 331 ~l~v~-~~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 331 RFGYT-PGNADSVIAAITQALEAP 353 (406)
T ss_dssp EEEEC-TTCHHHHHHHHHHHHHCC
T ss_pred EEEeC-CCCHHHHHHHHHHHHhCc
Confidence 77 65 457899999999999877
No 53
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=94.19 E-value=0.36 Score=45.81 Aligned_cols=131 Identities=11% Similarity=0.051 Sum_probs=73.4
Q ss_pred EEEEcCCcc-cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcc---cccCCCCcc
Q 022811 107 AYVNYGSIT-VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQD---KVLSHPSVS 182 (291)
Q Consensus 107 vyvs~GS~~-~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~---~iL~h~~v~ 182 (291)
+++..|... ....+.+-+.+..+.+.+.+++++...+. .....-.......+.++.+..+.+.. .+++.+++
T Consensus 329 ~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~- 404 (536)
T 3vue_A 329 LIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKK---KFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADV- 404 (536)
T ss_dssp EEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCH---HHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSE-
T ss_pred EEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCc---hHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhhe-
Confidence 445567765 23334444444444455667665543220 00011122233456788887776654 37778887
Q ss_pred eEEecC---C-chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCC---------CCCHHHHHHHHHHHHc
Q 022811 183 VFLTHG---G-WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNR---------DASREDIAALVKEIME 247 (291)
Q Consensus 183 ~fItHg---G-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~---------~~~~~~l~~ai~~vl~ 247 (291)
||.-. | -.+++||+++|+|+|+-.. ......+ ..-..|..+.. ..+.+.+.++|++++.
T Consensus 405 -~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V-~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 405 -LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTV-IEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp -EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHC-CBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred -eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchhee-eCCCCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 66421 2 3488999999999999754 2333334 33234443321 2356789999988875
No 54
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=93.25 E-value=0.022 Score=52.36 Aligned_cols=79 Identities=14% Similarity=0.013 Sum_probs=56.5
Q ss_pred CCeEEeeccCccc---ccCCCCcceEEecC---C-chhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCC
Q 022811 162 DRGMIANWCPQDK---VLSHPSVSVFLTHG---G-WNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDAS 234 (291)
Q Consensus 162 ~~~~v~~w~pq~~---iL~h~~v~~fItHg---G-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 234 (291)
.++.+.+++|+.+ +++.+++ ||.-. | .++++||+++|+|+|+ -..+ ....+ +.-..|+.+. .-+
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~-~~d 365 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLE-QLN 365 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEES-SCS
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeC-CCC
Confidence 5788889998664 7888898 66321 3 3468999999999998 3222 11233 4434677775 468
Q ss_pred HHHHHHHHHHHHcCC
Q 022811 235 REDIAALVKEIMEGD 249 (291)
Q Consensus 235 ~~~l~~ai~~vl~~~ 249 (291)
.+++.++|.++++|+
T Consensus 366 ~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 366 PENIAETLVELCMSF 380 (413)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCH
Confidence 899999999999877
No 55
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=90.86 E-value=0.39 Score=42.83 Aligned_cols=96 Identities=14% Similarity=0.168 Sum_probs=60.2
Q ss_pred CCceEEEEcCCcc---cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeE-Eeec--cCc-ccc
Q 022811 103 PNSVAYVNYGSIT---VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGM-IANW--CPQ-DKV 175 (291)
Q Consensus 103 ~~~vvyvs~GS~~---~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~w--~pq-~~i 175 (291)
++++|.+..|+.. ..+.+.+.++++.|.+.++++++ ++.. .+....+.+.+..+.+.. +.+- +.+ ..+
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl-~g~~----~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~al 258 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVF-FGGP----MDLEMVQPVVEQMETKPIVATGKFQLGPLAAA 258 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEE-CCCT----TTHHHHHHHHHTCSSCCEECTTCCCHHHHHHH
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE-EeCc----chHHHHHHHHHhcccccEEeeCCCCHHHHHHH
Confidence 4678889888853 57788999999999776888776 3322 111222333333333333 2221 222 348
Q ss_pred cCCCCcceEEecCCchhHHHHHhcCCCeeec
Q 022811 176 LSHPSVSVFLTHGGWNSILESVCGGVPIICW 206 (291)
Q Consensus 176 L~h~~v~~fItHgG~~S~~Eal~~GvP~i~~ 206 (291)
++++++ +|+.- .|.++=|.+.|+|+|++
T Consensus 259 i~~a~~--~i~~D-sG~~HlAaa~g~P~v~l 286 (349)
T 3tov_A 259 MNRCNL--LITND-SGPMHVGISQGVPIVAL 286 (349)
T ss_dssp HHTCSE--EEEES-SHHHHHHHTTTCCEEEE
T ss_pred HHhCCE--EEECC-CCHHHHHHhcCCCEEEE
Confidence 889888 99973 23333388899999986
No 56
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=88.85 E-value=2 Score=37.53 Aligned_cols=96 Identities=10% Similarity=0.072 Sum_probs=59.1
Q ss_pred CCceEEEEcCC-c-c--cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhc----CCeE-Eeecc--C
Q 022811 103 PNSVAYVNYGS-I-T--VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIK----DRGM-IANWC--P 171 (291)
Q Consensus 103 ~~~vvyvs~GS-~-~--~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~----~~~~-v~~w~--p 171 (291)
++++|.+.-|| . . ..+.+.+.++++.|.+.++++++. +.. .+....+.+.+..+ .++. +.+-. .
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~-g~~----~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~ 253 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLF-GSA----KDHEAGNEILAALNTEQQAWCRNLAGETQLD 253 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEEC-CCG----GGHHHHHHHHTTSCHHHHTTEEECTTTSCHH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEE-eCh----hhHHHHHHHHHhhhhccccceEeccCcCCHH
Confidence 45688888888 3 2 467789999999998778887764 322 11111122221111 2332 22222 1
Q ss_pred c-ccccCCCCcceEEecCCchhHHHHHhcCCCeeec
Q 022811 172 Q-DKVLSHPSVSVFLTHGGWNSILESVCGGVPIICW 206 (291)
Q Consensus 172 q-~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~ 206 (291)
+ ..+++++++ +|+.- .|.++-|.+.|+|+|++
T Consensus 254 e~~ali~~a~l--~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 254 QAVILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp HHHHHHHTSSE--EEEES-SHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 2 358989998 99973 45566688999999986
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=88.45 E-value=0.59 Score=40.80 Aligned_cols=131 Identities=13% Similarity=0.075 Sum_probs=76.4
Q ss_pred CCceEEEEcCCcc---cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeec--cCc-cccc
Q 022811 103 PNSVAYVNYGSIT---VMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANW--CPQ-DKVL 176 (291)
Q Consensus 103 ~~~vvyvs~GS~~---~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w--~pq-~~iL 176 (291)
.+++|.+..|+.. ..+.+.+.++++.|.+.++++++..+.. .+....+.+.+.. .++.+.+- +.+ ..++
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~----~e~~~~~~i~~~~-~~~~l~g~~sl~el~ali 251 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAP----HEEERAKRLAEGF-AYVEVLPKMSLEGVARVL 251 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSH----HHHHHHHHHHTTC-TTEEECCCCCHHHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCH----HHHHHHHHHHhhC-CcccccCCCCHHHHHHHH
Confidence 4567888888764 5778899999999877777776553422 1111112222222 23333321 223 3488
Q ss_pred CCCCcceEEec-CCchhHHHHHhcCCCeeec--ccccchhHHHHHHHHHhCcce-eeC------CCCCHHHHHHHHHHHH
Q 022811 177 SHPSVSVFLTH-GGWNSILESVCGGVPIICW--PFFAEQQTNCRYASTTWGIGM-EVN------RDASREDIAALVKEIM 246 (291)
Q Consensus 177 ~h~~v~~fItH-gG~~S~~Eal~~GvP~i~~--P~~~DQ~~na~~v~~~~G~G~-~l~------~~~~~~~l~~ai~~vl 246 (291)
+++++ +|+. .|...+ |.+.|+|+|++ |.. ..+. .-+|-.. .+. ..++.+++.+++.+++
T Consensus 252 ~~a~l--~I~~DSG~~Hl--Aaa~g~P~v~lfg~t~------p~~~-~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l 320 (326)
T 2gt1_A 252 AGAKF--VVSVDTGLSHL--TAALDRPNITVYGPTD------PGLI-GGYGKNQMVCRAPGNELSQLTANAVKQFIEENA 320 (326)
T ss_dssp HTCSE--EEEESSHHHHH--HHHTTCCEEEEESSSC------HHHH-CCCSSSEEEEECGGGCGGGCCHHHHHHHHHHTT
T ss_pred HhCCE--EEecCCcHHHH--HHHcCCCEEEEECCCC------hhhc-CCCCCCceEecCCcccccCCCHHHHHHHHHHHH
Confidence 89998 9998 444333 66699999998 321 1111 1112111 111 2689999999999998
Q ss_pred cCC
Q 022811 247 EGD 249 (291)
Q Consensus 247 ~~~ 249 (291)
++.
T Consensus 321 ~~~ 323 (326)
T 2gt1_A 321 EKA 323 (326)
T ss_dssp TTC
T ss_pred HHh
Confidence 754
No 58
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=81.56 E-value=2.9 Score=40.90 Aligned_cols=73 Identities=11% Similarity=0.043 Sum_probs=43.4
Q ss_pred eccCcc---------cccCCCCcceEEecC---C-chhHHHHHhcCCCeeecccccchhHHHHHHHHH------hCccee
Q 022811 168 NWCPQD---------KVLSHPSVSVFLTHG---G-WNSILESVCGGVPIICWPFFAEQQTNCRYASTT------WGIGME 228 (291)
Q Consensus 168 ~w~pq~---------~iL~h~~v~~fItHg---G-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~------~G~G~~ 228 (291)
.|++.. .++..+++ ||.-. | ..+++||+++|+|+|+--..+ ....+.+. -+.|+.
T Consensus 499 ~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG----~~d~V~dg~~~~~~~~tG~l 572 (725)
T 3nb0_A 499 EFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG----FGSYMEDLIETNQAKDYGIY 572 (725)
T ss_dssp SCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH----HHHHHHTTSCHHHHHHTTEE
T ss_pred cccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC----hhhhhhccccccCCCCceEE
Confidence 788764 36777887 65432 3 458899999999999965422 22222111 135776
Q ss_pred eCC--CCCHHHHHHHHHHHH
Q 022811 229 VNR--DASREDIAALVKEIM 246 (291)
Q Consensus 229 l~~--~~~~~~l~~ai~~vl 246 (291)
+.. ..+.+++.++|.++|
T Consensus 573 V~~rd~~d~ee~aeaLa~aL 592 (725)
T 3nb0_A 573 IVDRRFKAPDESVEQLVDYM 592 (725)
T ss_dssp EECCSSSCHHHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHH
Confidence 632 345555555555554
No 59
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=81.52 E-value=6.1 Score=37.00 Aligned_cols=109 Identities=11% Similarity=0.012 Sum_probs=67.5
Q ss_pred CeEEeeccCcc---cccCCCCcceEEe---cCCchh-HHHHHhcC---CCeeecccccchhHHHHHHHHHhC-cceeeCC
Q 022811 163 RGMIANWCPQD---KVLSHPSVSVFLT---HGGWNS-ILESVCGG---VPIICWPFFAEQQTNCRYASTTWG-IGMEVNR 231 (291)
Q Consensus 163 ~~~v~~w~pq~---~iL~h~~v~~fIt---HgG~~S-~~Eal~~G---vP~i~~P~~~DQ~~na~~v~~~~G-~G~~l~~ 231 (291)
++++.+.+|+. .++..+++ |+. +=|+|. ..|++++| .|+|+--+.+ .+ +.+| .|+.++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~----~~l~~~allVn- 421 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AA----EVLGEYCRSVN- 421 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----TH----HHHGGGSEEEC-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CH----HHhCCCEEEEC-
Confidence 57777777764 37778888 443 357775 58999996 5555543322 12 2233 477776
Q ss_pred CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 022811 232 DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLH 288 (291)
Q Consensus 232 ~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~ 288 (291)
..+.++++++|.++|+.++. .-+++.+++.+.+++ -+...=.+.|++.|..
T Consensus 422 P~D~~~lA~AI~~aL~m~~~-er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 422 PFDLVEQAEAISAALAAGPR-QRAEAAARRRDAARP-----WTLEAWVQAQLDGLAA 472 (496)
T ss_dssp TTBHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhh
Confidence 46899999999999987622 233333444333322 2445557777777754
No 60
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=79.32 E-value=22 Score=28.24 Aligned_cols=132 Identities=12% Similarity=0.067 Sum_probs=69.3
Q ss_pred hhHhhhccCCCCceEEEEcCC-cccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccC
Q 022811 93 ECLKWLNEKEPNSVAYVNYGS-ITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCP 171 (291)
Q Consensus 93 ~~~~wl~~~~~~~vvyvs~GS-~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~p 171 (291)
++-++|... .+..|+.|. .+ .+....++..+.+-.++-++.... ...+... + ....+++..+
T Consensus 36 ~lg~~La~~---g~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~~-----~~~~~~~---~-~~~i~~~~~~ 98 (176)
T 2iz6_A 36 ELGKQIATH---GWILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGPD-----TSEISDA---V-DIPIVTGLGS 98 (176)
T ss_dssp HHHHHHHHT---TCEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC----------CCTT---C-SEEEECCCCS
T ss_pred HHHHHHHHC---CCEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCchh-----hhhhccC---C-ceeEEcCCHH
Confidence 455666653 467777776 44 234455555555666666654210 0111110 0 1234556666
Q ss_pred ccc-cc-CCCCcceEEecCCchhHHHH---HhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHH
Q 022811 172 QDK-VL-SHPSVSVFLTHGGWNSILES---VCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIM 246 (291)
Q Consensus 172 q~~-iL-~h~~v~~fItHgG~~S~~Ea---l~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl 246 (291)
+.. ++ ..++ ..++--||.||+.|+ +.+++|++.+|.+. .....+.+..--.+.+ .-+.+++.+.+.+.+
T Consensus 99 ~Rk~~m~~~sd-a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~--~~~~~e~~~~l~~~~ 172 (176)
T 2iz6_A 99 ARDNINALSSN-VLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHV--AADVAGAIAAVKQLL 172 (176)
T ss_dssp SSCCCCGGGCS-EEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEE--ESSHHHHHHHHHHHH
T ss_pred HHHHHHHHhCC-EEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEE--cCCHHHHHHHHHHHH
Confidence 543 33 3444 356667899987655 67999999999832 2222332221112222 246777777776655
Q ss_pred c
Q 022811 247 E 247 (291)
Q Consensus 247 ~ 247 (291)
.
T Consensus 173 ~ 173 (176)
T 2iz6_A 173 A 173 (176)
T ss_dssp H
T ss_pred H
Confidence 3
No 61
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=71.35 E-value=21 Score=33.11 Aligned_cols=75 Identities=16% Similarity=0.160 Sum_probs=50.0
Q ss_pred eE-EeeccCccc---ccCCCCcceEEe---cCCch-hHHHHHhcCC-----CeeecccccchhHHHHHHHHHhCcceeeC
Q 022811 164 GM-IANWCPQDK---VLSHPSVSVFLT---HGGWN-SILESVCGGV-----PIICWPFFAEQQTNCRYASTTWGIGMEVN 230 (291)
Q Consensus 164 ~~-v~~w~pq~~---iL~h~~v~~fIt---HgG~~-S~~Eal~~Gv-----P~i~~P~~~DQ~~na~~v~~~~G~G~~l~ 230 (291)
+. +.+++++.+ ++..+++ ||. +=|+| ++.||+++|+ |+|+--+.+ .+ +.+..|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~----~~l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AA----NELTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GG----GTCTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CH----HHhCCeEEEC
Confidence 44 457777664 7788888 554 23444 7899999998 666654322 11 1123466665
Q ss_pred CCCCHHHHHHHHHHHHcCC
Q 022811 231 RDASREDIAALVKEIMEGD 249 (291)
Q Consensus 231 ~~~~~~~l~~ai~~vl~~~ 249 (291)
..+.++++++|.++|+++
T Consensus 403 -p~d~~~lA~ai~~lL~~~ 420 (482)
T 1uqt_A 403 -PYDRDEVAAALDRALTMS 420 (482)
T ss_dssp -TTCHHHHHHHHHHHHTCC
T ss_pred -CCCHHHHHHHHHHHHcCC
Confidence 467899999999999865
No 62
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=63.45 E-value=12 Score=33.09 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=25.5
Q ss_pred CceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcC
Q 022811 104 NSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRP 142 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~ 142 (291)
+.|++.+.||-+... -...+++.|.+.|+.++|+...
T Consensus 3 ~~i~i~~GGTgGHi~--palala~~L~~~g~~V~~vg~~ 39 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVF--PALACAREFQARGYAVHWLGTP 39 (365)
T ss_dssp CEEEEECCSSHHHHH--HHHHHHHHHHHTTCEEEEEECS
T ss_pred CcEEEEcCCCHHHHH--HHHHHHHHHHhCCCEEEEEECC
Confidence 457777777765322 1345788888889999998753
No 63
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=60.63 E-value=62 Score=25.77 Aligned_cols=143 Identities=12% Similarity=0.133 Sum_probs=75.4
Q ss_pred CceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcce
Q 022811 104 NSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSV 183 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~ 183 (291)
.+.|-|-+||.. +...+++....|+..+.++=..+-.- ...|+.+.+-. .+ .....+++
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~~~----------~~---a~~~g~~V 79 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSA------HRTPDRLADYA----------RT---AAERGLNV 79 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHHHH----------HH---TTTTTCCE
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHHHH----------HH---HHhCCCcE
Confidence 345777788876 56778888888888888764444321 23444432211 00 01111233
Q ss_pred EEecCCch----hHHHHHhcCCCeeecccccc--hhHHHH-HHHH-HhCccee---eC--CCCCHHHHHHHHHHHHcCCh
Q 022811 184 FLTHGGWN----SILESVCGGVPIICWPFFAE--QQTNCR-YAST-TWGIGME---VN--RDASREDIAALVKEIMEGDK 250 (291)
Q Consensus 184 fItHgG~~----S~~Eal~~GvP~i~~P~~~D--Q~~na~-~v~~-~~G~G~~---l~--~~~~~~~l~~ai~~vl~~~~ 250 (291)
||.=.|.. ++.-++ .-+|+|.+|.... ....+- .+++ --|+.+. ++ ...+..-+...|- -++|+
T Consensus 80 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I~~a~~~nAallAaqIl-a~~d~- 156 (182)
T 1u11_A 80 IIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASIL-ALYNP- 156 (182)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHH-GGGCH-
T ss_pred EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHH-ccCCH-
Confidence 77766643 444444 3679999998542 222221 1112 0244422 11 1123333333222 23566
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC
Q 022811 251 GKLIRQNVQDWRKKAEAATDVG 272 (291)
Q Consensus 251 ~~~~r~~a~~l~~~~~~a~~~g 272 (291)
.++++.+..++..++.+.+.
T Consensus 157 --~l~~kL~~~r~~~~~~v~~~ 176 (182)
T 1u11_A 157 --ALAARLETWRALQTASVPNS 176 (182)
T ss_dssp --HHHHHHHHHHHHHHHHSCSS
T ss_pred --HHHHHHHHHHHHHHHHHHHh
Confidence 89999999888887766544
No 64
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=56.42 E-value=11 Score=32.11 Aligned_cols=52 Identities=19% Similarity=0.258 Sum_probs=36.2
Q ss_pred ceEEecCCchhHHHHHhc------CCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 182 SVFLTHGGWNSILESVCG------GVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 182 ~~fItHgG~~S~~Eal~~------GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.++|+=||=||+.++... ++|++++|.. . .| .+ ..+.++++.+++++++.+.
T Consensus 37 D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G------------~--lg-fl-~~~~~~~~~~~l~~l~~g~ 94 (272)
T 2i2c_A 37 EIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG------------H--LG-FY-ADWRPAEADKLVKLLAKGE 94 (272)
T ss_dssp SEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS------------S--CC-SS-CCBCGGGHHHHHHHHHTTC
T ss_pred CEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC------------C--CC-cC-CcCCHHHHHHHHHHHHcCC
Confidence 349999999999998754 8899999851 1 12 11 1345677888888877643
No 65
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=51.53 E-value=90 Score=24.81 Aligned_cols=143 Identities=17% Similarity=0.133 Sum_probs=76.3
Q ss_pred CceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcce
Q 022811 104 NSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSV 183 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~ 183 (291)
++.|-|-+||.. +...+++..+.|++.+..+-..+-.- ...|+.+.+-.. -.....+++
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA------HRtp~~l~~~~~-------------~a~~~g~~V 80 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYMFEYAE-------------TARERGLKV 80 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHHHH-------------HTTTTTCCE
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc------ccChHHHHHHHH-------------HHHhcCceE
Confidence 567888899987 46778888889998888765444322 234444322110 011123344
Q ss_pred EEecCCchhHHHHH---hcCCCeeecccccch---hHHHHHHHHHhCcceeeCC-CCCH---HHHHHHHHHHH--cCChH
Q 022811 184 FLTHGGWNSILESV---CGGVPIICWPFFAEQ---QTNCRYASTTWGIGMEVNR-DASR---EDIAALVKEIM--EGDKG 251 (291)
Q Consensus 184 fItHgG~~S~~Eal---~~GvP~i~~P~~~DQ---~~na~~v~~~~G~G~~l~~-~~~~---~~l~~ai~~vl--~~~~~ 251 (291)
||.=.|.-.-+-.+ ..-+|+|++|..... .+.-..+ -.+-.|+-+-. ..+. ..-.-.-.++| .|+
T Consensus 81 iIa~AG~aahLpGvvAa~T~~PVIGVPv~s~~l~G~DsLlSi-vQMP~GvpVaTvaig~~ga~NAallA~qILa~~d~-- 157 (181)
T 4b4k_A 81 IIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSI-VQMPGGVPVATVAIGKAGSTNAGLLAAQILGSFHD-- 157 (181)
T ss_dssp EEEEECSSCCHHHHHHTTCCSCEEEEECCCTTTTTHHHHHHH-HTCCTTCCCEECCSSHHHHHHHHHHHHHHHTTTCH--
T ss_pred EEEeccccccchhhHHhcCCCCEEEEecCCCCccchhhHHHH-HhCCCCCceEEEecCCccHHHHHHHHHHHHccCCH--
Confidence 77766644333332 345699999986432 2222222 22333443322 2221 22222223444 466
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 022811 252 KLIRQNVQDWRKKAEAATDV 271 (291)
Q Consensus 252 ~~~r~~a~~l~~~~~~a~~~ 271 (291)
.++++.+..++..++.+.+
T Consensus 158 -~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 158 -DIHDALELRREAIEKDVRE 176 (181)
T ss_dssp -HHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHH
Confidence 7888888877777665544
No 66
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=51.44 E-value=48 Score=24.30 Aligned_cols=50 Identities=10% Similarity=0.027 Sum_probs=33.6
Q ss_pred hcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 198 CGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 198 ~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
...+|+|++--..+...-.. . -..|+--.+.+.++.++|..+|+.++...
T Consensus 73 ~~~~pii~ls~~~~~~~~~~-~-~~~g~~~~l~kP~~~~~L~~~i~~~~~~~ 122 (155)
T 1qkk_A 73 DPDLPMILVTGHGDIPMAVQ-A-IQDGAYDFIAKPFAADRLVQSARRAEEKR 122 (155)
T ss_dssp CTTSCEEEEECGGGHHHHHH-H-HHTTCCEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHH-H-HhcCCCeEEeCCCCHHHHHHHHHHHHHHH
Confidence 34788888755444333333 3 24576666666889999999999998643
No 67
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=49.16 E-value=24 Score=29.14 Aligned_cols=28 Identities=21% Similarity=0.209 Sum_probs=23.5
Q ss_pred cceEEecCCchhHHHHHhcCCCeeecccc
Q 022811 181 VSVFLTHGGWNSILESVCGGVPIICWPFF 209 (291)
Q Consensus 181 v~~fItHgG~~S~~Eal~~GvP~i~~P~~ 209 (291)
+++||+.||........ .++|+|-+|..
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs 91 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPS 91 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCC
Confidence 33499999999999976 57999999984
No 68
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=49.03 E-value=33 Score=23.47 Aligned_cols=50 Identities=18% Similarity=0.301 Sum_probs=33.2
Q ss_pred hcCCCeeecccccchhHHHH-HH-HHHhCcceeeCCCCCHHHHHHHHHHHHc
Q 022811 198 CGGVPIICWPFFAEQQTNCR-YA-STTWGIGMEVNRDASREDIAALVKEIME 247 (291)
Q Consensus 198 ~~GvP~i~~P~~~DQ~~na~-~v-~~~~G~G~~l~~~~~~~~l~~ai~~vl~ 247 (291)
-.|+|++++--.+.|.+.-. .- +++-|+...+-+..+++++...+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhhccCCHHHHHHHHHHHHH
Confidence 46888888877777765322 22 1223665555557889999999998874
No 69
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=44.27 E-value=36 Score=27.30 Aligned_cols=64 Identities=11% Similarity=0.138 Sum_probs=38.9
Q ss_pred HHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCCh----HHHHHHHHHHHHHHHHH--H--HhcCCChHHHHHHHH
Q 022811 214 TNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGDK----GKLIRQNVQDWRKKAEA--A--TDVGGASFNNFNKCI 283 (291)
Q Consensus 214 ~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~----~~~~r~~a~~l~~~~~~--a--~~~gg~s~~~~~~~v 283 (291)
..+.+- +..|+|+.+ |+++|.++|.+++...+ -+.|+ +.-.+-..+|+ . |+++..--..++..+
T Consensus 103 d~~~Fe-~~cGVGV~V----T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~~~ 174 (187)
T 3tl4_X 103 TKMGMN-ENSGVGIEI----TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQEV 174 (187)
T ss_dssp CHHHHH-HTTTTTCCC----CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHHHH
T ss_pred CHHHHH-HHCCCCeEe----CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHHHH
Confidence 334343 667888875 79999999999996432 13466 66666666654 1 344444444444433
No 70
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=41.24 E-value=18 Score=29.14 Aligned_cols=31 Identities=13% Similarity=0.236 Sum_probs=25.1
Q ss_pred CCcceEEecCCchhHHHHHhcCCCeeeccccc
Q 022811 179 PSVSVFLTHGGWNSILESVCGGVPIICWPFFA 210 (291)
Q Consensus 179 ~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~ 210 (291)
...+++|+.||........ .++|+|-+|..+
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 3344599999999999976 579999999854
No 71
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=39.40 E-value=42 Score=28.89 Aligned_cols=31 Identities=16% Similarity=0.234 Sum_probs=23.8
Q ss_pred cCCCCcceEEecCCchhHHHHHhc----CCCeeeccc
Q 022811 176 LSHPSVSVFLTHGGWNSILESVCG----GVPIICWPF 208 (291)
Q Consensus 176 L~h~~v~~fItHgG~~S~~Eal~~----GvP~i~~P~ 208 (291)
...+++ +|+-||-||+++++.. ++|+++++.
T Consensus 73 ~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 73 ADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ---CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred ccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 344555 9999999999999744 899999974
No 72
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=37.28 E-value=1.4e+02 Score=23.89 Aligned_cols=95 Identities=18% Similarity=0.140 Sum_probs=53.5
Q ss_pred hhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEe--ecc
Q 022811 93 ECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIA--NWC 170 (291)
Q Consensus 93 ~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~w~ 170 (291)
++-++|... .+..|+.|..+ .+....++..+.+-.++-++.... . +..+ ....+. ..+
T Consensus 49 ~lg~~LA~~---G~~vVsGg~~G-----iM~aa~~gAl~~GG~~iGVlP~e~------~-~~~~-----~~~~~~~~~~f 108 (195)
T 1rcu_A 49 ELGRTLAKK---GYLVFNGGRDG-----VMELVSQGVREAGGTVVGILPDEE------A-GNPY-----LSVAVKTGLDF 108 (195)
T ss_dssp HHHHHHHHT---TCEEEECCSSH-----HHHHHHHHHHHTTCCEEEEESTTC------C-CCTT-----CSEEEECCCCH
T ss_pred HHHHHHHHC---CCEEEeCCHHH-----HHHHHHHHHHHcCCcEEEEeCCcc------c-CCCC-----cceeeecCCCH
Confidence 455677653 46667755443 445555665556666776665321 0 1111 223332 234
Q ss_pred C-ccc-ccCCCCcceEEecCCchhHHH---HHhcCCCeeeccc
Q 022811 171 P-QDK-VLSHPSVSVFLTHGGWNSILE---SVCGGVPIICWPF 208 (291)
Q Consensus 171 p-q~~-iL~h~~v~~fItHgG~~S~~E---al~~GvP~i~~P~ 208 (291)
+ -.. +...++. .++--||.||+.| ++.+++|+++++.
T Consensus 109 ~~Rk~~m~~~sda-~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 109 QMRSFVLLRNADV-VVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHHHHHHHTTCSE-EEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHHHhCCE-EEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 4 233 4444443 5677899998765 5779999999974
No 73
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=37.04 E-value=1.5e+02 Score=23.26 Aligned_cols=144 Identities=17% Similarity=0.136 Sum_probs=75.5
Q ss_pred CceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcce
Q 022811 104 NSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSV 183 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~ 183 (291)
+|.|-|-+||.. +...+++....|+..+.++=..+-+- ...|+.+.+-. .+ .....+++
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~~~----------~~---a~~~g~~V 69 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYMFEYA----------ET---ARERGLKV 69 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHHH----------HH---TTTTTCCE
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHHHHH----------HH---HHhCCCcE
Confidence 466788888886 56778888888888888764444321 23444432211 00 01112233
Q ss_pred EEecCCchhHHHHHhc---CCCeeecccccc--hhHHHHHHHHH--hCccee---eC--CCCCHHHHHHHHHHHHcCChH
Q 022811 184 FLTHGGWNSILESVCG---GVPIICWPFFAE--QQTNCRYASTT--WGIGME---VN--RDASREDIAALVKEIMEGDKG 251 (291)
Q Consensus 184 fItHgG~~S~~Eal~~---GvP~i~~P~~~D--Q~~na~~v~~~--~G~G~~---l~--~~~~~~~l~~ai~~vl~~~~~ 251 (291)
||.=.|...-+-.+.+ -+|+|.+|.... ....+-.=.-. -|+.+. ++ ...++.-+...|- -+.|+
T Consensus 70 iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~a~~~nAallAaqIl-a~~d~-- 146 (170)
T 1xmp_A 70 IIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQIL-GSFHD-- 146 (170)
T ss_dssp EEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHHHHHH-HTTCH--
T ss_pred EEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHHHHH-ccCCH--
Confidence 7776665433333333 469999998542 22222111012 244322 11 1123333333332 24566
Q ss_pred HHHHHHHHHHHHHHHHHHhcC
Q 022811 252 KLIRQNVQDWRKKAEAATDVG 272 (291)
Q Consensus 252 ~~~r~~a~~l~~~~~~a~~~g 272 (291)
.++++.+..++..++.+.+.
T Consensus 147 -~l~~kl~~~r~~~~~~v~~~ 166 (170)
T 1xmp_A 147 -DIHDALELRREAIEKDVREG 166 (170)
T ss_dssp -HHHHHHHHHHHHHHHHHHC-
T ss_pred -HHHHHHHHHHHHHHHHHHhc
Confidence 78888888888887765543
No 74
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=36.67 E-value=1.6e+02 Score=23.42 Aligned_cols=141 Identities=15% Similarity=0.175 Sum_probs=71.6
Q ss_pred CceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcce
Q 022811 104 NSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSV 183 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~ 183 (291)
-+.|-|-+||.. +...+++....|+..+.++=..+-+- ...|+.+.+-.. + .....+++
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~~~~----------~---a~~~g~~V 71 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA------HRTPDRMFEYAK----------N---AEERGIEV 71 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHHHHHH----------H---TTTTTCCE
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHHHHH----------H---HHhCCCcE
Confidence 357788888886 56778888888888887754444321 234444322110 0 01112233
Q ss_pred EEecCCch----hHHHHHhcCCCeeecccccc--hhHHHHHHHHHh--Ccceee---CCCCCHHHHHHHHHHHHcCChHH
Q 022811 184 FLTHGGWN----SILESVCGGVPIICWPFFAE--QQTNCRYASTTW--GIGMEV---NRDASREDIAALVKEIMEGDKGK 252 (291)
Q Consensus 184 fItHgG~~----S~~Eal~~GvP~i~~P~~~D--Q~~na~~v~~~~--G~G~~l---~~~~~~~~l~~ai~~vl~~~~~~ 252 (291)
||.=+|.. ++.-++ .-+|+|.+|.... ....+-.=.-.. |+.+.. +...++.-+...|- -+.|+
T Consensus 72 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~Id~~~nAa~lAaqIl-a~~d~--- 146 (183)
T 1o4v_A 72 IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAINNAKNAGILAASIL-GIKYP--- 146 (183)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCTTCHHHHHHHHHHHH-HTTCH---
T ss_pred EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCchHHHHHHHHHH-hcCCH---
Confidence 77666543 333333 5579999998542 223331111233 433322 11223333333332 23566
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 022811 253 LIRQNVQDWRKKAEAATD 270 (291)
Q Consensus 253 ~~r~~a~~l~~~~~~a~~ 270 (291)
.++++.+..+......+.
T Consensus 147 ~l~~kL~~~r~~~~~~v~ 164 (183)
T 1o4v_A 147 EIARKVKEYKERMKREVL 164 (183)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 677777777776666543
No 75
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=36.46 E-value=1.6e+02 Score=25.24 Aligned_cols=124 Identities=15% Similarity=0.160 Sum_probs=62.1
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcce
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLANS-GHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSV 183 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~ 183 (291)
.+.+|..|.++ ..++.++.+. +..++.++..+. .-...+.+..+ . ..+-...++|..+++.+
T Consensus 6 rvgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~~------~~~~~~a~~~g--~--~~~~~~~~~l~~~~~D~ 68 (344)
T 3euw_A 6 RIALFGAGRIG-------HVHAANIAANPDLELVVIADPFI------EGAQRLAEANG--A--EAVASPDEVFARDDIDG 68 (344)
T ss_dssp EEEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSSH------HHHHHHHHTTT--C--EEESSHHHHTTCSCCCE
T ss_pred EEEEECCcHHH-------HHHHHHHHhCCCcEEEEEECCCH------HHHHHHHHHcC--C--ceeCCHHHHhcCCCCCE
Confidence 46677777664 2344555554 556665655320 11112222221 2 22334456787566555
Q ss_pred EEecCCch----hHHHHHhcCCCeee-cccccc--hhHHHHHHHHHhCcceeeCC--CCCHHHHHHHHHHHHc
Q 022811 184 FLTHGGWN----SILESVCGGVPIIC-WPFFAE--QQTNCRYASTTWGIGMEVNR--DASREDIAALVKEIME 247 (291)
Q Consensus 184 fItHgG~~----S~~Eal~~GvP~i~-~P~~~D--Q~~na~~v~~~~G~G~~l~~--~~~~~~l~~ai~~vl~ 247 (291)
++--.... -+.+++.+|+++++ -|+..+ +-.-...++++.|+-+.+.- .+.+ ....+++++.
T Consensus 69 V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p--~~~~~k~~i~ 139 (344)
T 3euw_A 69 IVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDP--SFAAINARVA 139 (344)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCH--HHHHHHHHHH
T ss_pred EEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCH--HHHHHHHHHh
Confidence 66544433 36778999999888 576543 33322233355555444432 3333 2334455554
No 76
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=35.67 E-value=1.6e+02 Score=23.18 Aligned_cols=141 Identities=12% Similarity=0.099 Sum_probs=70.1
Q ss_pred CceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcce
Q 022811 104 NSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSV 183 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~ 183 (291)
++.|-|-+||.. +...+++....|+..+.++=..+-+- ...|+.+.+-.. .. --...++
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa------HR~p~~~~~~~~----------~a-~~~g~~V-- 65 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA------HRTPEAMFSYAR----------GA-AARGLEV-- 65 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHHHHH----------HH-HHHTCCE--
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC------CCCHHHHHHHHH----------HH-HhCCCCE--
Confidence 345677778875 56778888888888888764444321 234443322110 00 0011233
Q ss_pred EEecCCch----hHHHHHhcCCCeeecccccch--hHHHH-HHHH-HhCcceeeCCCCCHHHHHHHHHHHH--cCChHHH
Q 022811 184 FLTHGGWN----SILESVCGGVPIICWPFFAEQ--QTNCR-YAST-TWGIGMEVNRDASREDIAALVKEIM--EGDKGKL 253 (291)
Q Consensus 184 fItHgG~~----S~~Eal~~GvP~i~~P~~~DQ--~~na~-~v~~-~~G~G~~l~~~~~~~~l~~ai~~vl--~~~~~~~ 253 (291)
||.=+|.. ++.-++ .-+|+|.+|..... ...+- .+.+ --|+.+..-.--+...-.-...+++ +|+ .
T Consensus 66 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~~~nAa~lAa~Il~~~d~---~ 141 (174)
T 3lp6_A 66 IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANP---Q 141 (174)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTCHHHHHHHHHHHHHTTCH---H
T ss_pred EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCcchHHHHHHHHHHhCCCH---H
Confidence 77766644 333333 45799999985321 22221 1111 1132222211002322222222333 466 7
Q ss_pred HHHHHHHHHHHHHHHH
Q 022811 254 IRQNVQDWRKKAEAAT 269 (291)
Q Consensus 254 ~r~~a~~l~~~~~~a~ 269 (291)
++++.+..++..++.+
T Consensus 142 l~~kl~~~r~~~~~~v 157 (174)
T 3lp6_A 142 LRARIVAFQDRLADVV 157 (174)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888888887776654
No 77
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=35.43 E-value=1.5e+02 Score=25.22 Aligned_cols=125 Identities=13% Similarity=0.121 Sum_probs=61.4
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcce
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLANS-GHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSV 183 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~ 183 (291)
.+.+|..|.++. .++.++.+. +..++.++..+. .-...+.++.+. ...+-...++|..+++.+
T Consensus 7 ~igiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~------~~~~~~~~~~~~---~~~~~~~~~ll~~~~~D~ 70 (330)
T 3e9m_A 7 RYGIMSTAQIVP-------RFVAGLRESAQAEVRGIASRRL------ENAQKMAKELAI---PVAYGSYEELCKDETIDI 70 (330)
T ss_dssp EEEECSCCTTHH-------HHHHHHHHSSSEEEEEEBCSSS------HHHHHHHHHTTC---CCCBSSHHHHHHCTTCSE
T ss_pred EEEEECchHHHH-------HHHHHHHhCCCcEEEEEEeCCH------HHHHHHHHHcCC---CceeCCHHHHhcCCCCCE
Confidence 466777777652 345556554 455555554321 111222222211 012334456777666555
Q ss_pred EEecCCch----hHHHHHhcCCCeee-cccccc--hhHHHHHHHHHhCcceeeCC--CCCHHHHHHHHHHHHc
Q 022811 184 FLTHGGWN----SILESVCGGVPIIC-WPFFAE--QQTNCRYASTTWGIGMEVNR--DASREDIAALVKEIME 247 (291)
Q Consensus 184 fItHgG~~----S~~Eal~~GvP~i~-~P~~~D--Q~~na~~v~~~~G~G~~l~~--~~~~~~l~~ai~~vl~ 247 (291)
++--.-.. -+.+++.+|+++++ -|+..+ +-.-...++++.|+-+.+.- .+.+ ....+++++.
T Consensus 71 V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p--~~~~~k~~i~ 141 (330)
T 3e9m_A 71 IYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLP--ITQKVKATIQ 141 (330)
T ss_dssp EEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCH--HHHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCH--HHHHHHHHHh
Confidence 65443333 36778999999887 576543 33332233355555444432 3333 2344455554
No 78
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=35.01 E-value=89 Score=25.48 Aligned_cols=100 Identities=15% Similarity=0.156 Sum_probs=50.9
Q ss_pred hhHhhhccCCCCceEEEEcCCc-ccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccC
Q 022811 93 ECLKWLNEKEPNSVAYVNYGSI-TVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCP 171 (291)
Q Consensus 93 ~~~~wl~~~~~~~vvyvs~GS~-~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~p 171 (291)
++-++|... .+..|+.|.. + .+....++..+.+-.++=++.... .+.+..........+...++
T Consensus 36 ~lg~~LA~~---G~~vVsGGg~~G-----iM~aa~~gAl~~GG~tiGVlP~~~-------~~~e~~~~~~~~~~~~~~f~ 100 (215)
T 2a33_A 36 DLGNELVSR---NIDLVYGGGSIG-----LMGLVSQAVHDGGRHVIGIIPKTL-------MPRELTGETVGEVRAVADMH 100 (215)
T ss_dssp HHHHHHHHT---TCEEEECCCSSH-----HHHHHHHHHHHTTCCEEEEEESSC-------C--------CCEEEEESSHH
T ss_pred HHHHHHHHC---CCEEEECCChhh-----HhHHHHHHHHHcCCcEEEEcchHh-------cchhhccCCCCceeecCCHH
Confidence 344556543 4566766653 3 334444555555555555554221 11111000011233445555
Q ss_pred ccc--ccCCCCcceEEecCCchhHHHHHh---------cCCCeeeccc
Q 022811 172 QDK--VLSHPSVSVFLTHGGWNSILESVC---------GGVPIICWPF 208 (291)
Q Consensus 172 q~~--iL~h~~v~~fItHgG~~S~~Eal~---------~GvP~i~~P~ 208 (291)
+.. +...++ ..++--||.||+-|... +++|++.+-.
T Consensus 101 ~Rk~~~~~~sd-a~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 101 QRKAEMAKHSD-AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp HHHHHHHHTCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred HHHHHHHHhCC-EEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 433 333444 35677899999988762 4899998865
No 79
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=32.07 E-value=1.3e+02 Score=21.33 Aligned_cols=48 Identities=8% Similarity=0.010 Sum_probs=29.1
Q ss_pred cCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHc
Q 022811 199 GGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIME 247 (291)
Q Consensus 199 ~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~ 247 (291)
..+|+|++--..+.......+ ...|+--.+.+.++.+++..+|+.++.
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~-~~~ga~~~l~KP~~~~~L~~~i~~~~~ 118 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAI-NDAGIHQFLTKPWHPEQLLSSARNAAR 118 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHH-HHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHH-HhhchhhhccCCCCHHHHHHHHHHHHH
Confidence 356766664444433333333 333454455567899999999999875
No 80
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=31.54 E-value=1.5e+02 Score=25.61 Aligned_cols=126 Identities=13% Similarity=0.090 Sum_probs=65.0
Q ss_pred CceEEEEcCCcccCCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCc
Q 022811 104 NSVAYVNYGSITVMTDEQMKEFAWGLANS--GHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSV 181 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v 181 (291)
-.+.+|..|.++. ..+.++.+. +..++.++..+. .-.+.+.++.. + ..+-.-.++|..+++
T Consensus 14 ~rvgiiG~G~~g~-------~~~~~l~~~~~~~~lvav~d~~~------~~~~~~~~~~~--~--~~~~~~~~ll~~~~~ 76 (354)
T 3q2i_A 14 IRFALVGCGRIAN-------NHFGALEKHADRAELIDVCDIDP------AALKAAVERTG--A--RGHASLTDMLAQTDA 76 (354)
T ss_dssp EEEEEECCSTTHH-------HHHHHHHHTTTTEEEEEEECSSH------HHHHHHHHHHC--C--EEESCHHHHHHHCCC
T ss_pred ceEEEEcCcHHHH-------HHHHHHHhCCCCeEEEEEEcCCH------HHHHHHHHHcC--C--ceeCCHHHHhcCCCC
Confidence 3578888888762 344555554 566666665330 11122222221 2 233344567765555
Q ss_pred ceEEecCC----chhHHHHHhcCCCeee-cccccc--hhHHHHHHHHHhCcceeeCC--CCCHHHHHHHHHHHHcC
Q 022811 182 SVFLTHGG----WNSILESVCGGVPIIC-WPFFAE--QQTNCRYASTTWGIGMEVNR--DASREDIAALVKEIMEG 248 (291)
Q Consensus 182 ~~fItHgG----~~S~~Eal~~GvP~i~-~P~~~D--Q~~na~~v~~~~G~G~~l~~--~~~~~~l~~ai~~vl~~ 248 (291)
.+++--.- ..-+.+++.+|+++++ -|+..+ +-.-...++++.|+-+.+.- .+.+ ....+++++.+
T Consensus 77 D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p--~~~~~k~~i~~ 150 (354)
T 3q2i_A 77 DIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNA--TLQLLKRAMQE 150 (354)
T ss_dssp SEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSH--HHHHHHHHHHT
T ss_pred CEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCH--HHHHHHHHHhc
Confidence 44553222 2246678999999988 577543 33332233355565554432 3444 34455666543
No 81
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=30.44 E-value=2e+02 Score=22.55 Aligned_cols=113 Identities=13% Similarity=0.180 Sum_probs=59.6
Q ss_pred CceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEe---eccCcccccCCCC
Q 022811 104 NSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIA---NWCPQDKVLSHPS 180 (291)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~w~pq~~iL~h~~ 180 (291)
+.+++.--||.+... ..++++.|.+.++.+-.++... ....+.....+.+.+.++.. .|+++..+-..++
T Consensus 6 k~IllgvTGs~aa~k---~~~ll~~L~~~g~~V~vv~T~~----A~~fi~~~~l~~l~~~v~~~~~~~~~~hi~l~~~aD 78 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN---ISHYIIELKSKFDEVNVIASTN----GRKFINGEILKQFCDNYYDEFEDPFLNHVDIANKHD 78 (175)
T ss_dssp CEEEEEECSSGGGGG---HHHHHHHHTTTCSEEEEEECTG----GGGGSCHHHHHHHCSCEECTTTCTTCCHHHHHHTCS
T ss_pred CEEEEEEeCHHHHHH---HHHHHHHHHHCCCEEEEEECcC----HHHHhhHHHHHHhcCCEEecCCCCccccccccchhC
Confidence 446666667765432 4456677777787776666533 11122222223333322211 2333444444455
Q ss_pred cceEEecCCchhHHH-------------HHhcCCCeeeccccc----ch---hHHHHHHHHHhCc
Q 022811 181 VSVFLTHGGWNSILE-------------SVCGGVPIICWPFFA----EQ---QTNCRYASTTWGI 225 (291)
Q Consensus 181 v~~fItHgG~~S~~E-------------al~~GvP~i~~P~~~----DQ---~~na~~v~~~~G~ 225 (291)
+ .+|.-|-.||+.. ++..++|+++.|-.. .. ..|-..+ .++|+
T Consensus 79 ~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L-~~~G~ 141 (175)
T 3qjg_A 79 K-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLL-KDYGV 141 (175)
T ss_dssp E-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHH-HHTTC
T ss_pred E-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHH-HHCCC
Confidence 4 4677777776543 367789999999532 21 3456666 44554
No 82
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=30.12 E-value=2e+02 Score=22.60 Aligned_cols=141 Identities=14% Similarity=0.179 Sum_probs=72.9
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcc
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVS 182 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~ 182 (291)
+.|.|-|-+||.. +...+++....|+..+..+=..+-+- ...|+.+.+-. -. .....++
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~l~~~~----------~~---a~~~g~~ 69 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA------HRMPDEMFDYA----------EK---ARERGLR 69 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHHH----------HH---HTTTTCS
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc------ccCHHHHHHHH----------HH---HHhcCCe
Confidence 4567888889886 56778888888888887764444321 23444432211 00 0112233
Q ss_pred eEEecCCch----hHHHHHhcCCCeeecccccch--hHHH-HHHHHHh--CcceeeCCCCCH---HHHHHHHHHHH--cC
Q 022811 183 VFLTHGGWN----SILESVCGGVPIICWPFFAEQ--QTNC-RYASTTW--GIGMEVNRDASR---EDIAALVKEIM--EG 248 (291)
Q Consensus 183 ~fItHgG~~----S~~Eal~~GvP~i~~P~~~DQ--~~na-~~v~~~~--G~G~~l~~~~~~---~~l~~ai~~vl--~~ 248 (291)
+||.=.|.- ++.-+ ..-+|+|.+|..... ...+ ..+ -.+ |+.+..- .++. ..-.-.-.++| +|
T Consensus 70 ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSi-vqMP~Gvpvatv-~i~~~~a~NAallA~~ILa~~d 146 (173)
T 4grd_A 70 AIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSI-VQMPKGVPVATF-AIGEAGAANAALFAVSILSGNS 146 (173)
T ss_dssp EEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHH-HCCCTTSCCEEC-CSSHHHHHHHHHHHHHHHTTSC
T ss_pred EEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHH-HhCCCCCCceEE-ecCCcchHHHHHHHHHHHcCCC
Confidence 366655533 34444 346899999974332 1122 112 122 3333211 2222 11111222344 46
Q ss_pred ChHHHHHHHHHHHHHHHHHHHh
Q 022811 249 DKGKLIRQNVQDWRKKAEAATD 270 (291)
Q Consensus 249 ~~~~~~r~~a~~l~~~~~~a~~ 270 (291)
+ .++++.++.+++.++.+.
T Consensus 147 ~---~l~~kl~~~r~~~~~~v~ 165 (173)
T 4grd_A 147 V---DYANRLAAFRVRQNEAAH 165 (173)
T ss_dssp H---HHHHHHHHHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHHHHHHHH
Confidence 6 788888888887766543
No 83
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=29.96 E-value=1.5e+02 Score=25.72 Aligned_cols=110 Identities=14% Similarity=0.044 Sum_probs=55.2
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcce
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLANS-GHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSV 183 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~ 183 (291)
.+..|..|.++. ..++.++.+. +..++.++..+. .-...+.+.. +.. .-+-...++|..+++.+
T Consensus 7 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~~------~~~~~~a~~~-~~~--~~~~~~~~ll~~~~vD~ 71 (359)
T 3m2t_A 7 KVGLVGIGAQMQ------ENLLPSLLQMQDIRIVAACDSDL------ERARRVHRFI-SDI--PVLDNVPAMLNQVPLDA 71 (359)
T ss_dssp EEEEECCSHHHH------HTHHHHHHTCTTEEEEEEECSSH------HHHGGGGGTS-CSC--CEESSHHHHHHHSCCSE
T ss_pred eEEEECCCHHHH------HHHHHHHHhCCCcEEEEEEcCCH------HHHHHHHHhc-CCC--cccCCHHHHhcCCCCCE
Confidence 466777776541 1245556554 456665655320 0001111111 111 11234456777776666
Q ss_pred EEecCCch----hHHHHHhcCCCeee-cccccc--hhHHHHHHHHHhCcceee
Q 022811 184 FLTHGGWN----SILESVCGGVPIIC-WPFFAE--QQTNCRYASTTWGIGMEV 229 (291)
Q Consensus 184 fItHgG~~----S~~Eal~~GvP~i~-~P~~~D--Q~~na~~v~~~~G~G~~l 229 (291)
++-..... -+.+++.+|++++| -|+..+ +-.-...++++.|+-+.+
T Consensus 72 V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v 124 (359)
T 3m2t_A 72 VVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGV 124 (359)
T ss_dssp EEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 66544433 35678899999888 577543 333322333555654444
No 84
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=29.89 E-value=1e+02 Score=21.12 Aligned_cols=47 Identities=9% Similarity=-0.013 Sum_probs=32.1
Q ss_pred cCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcC
Q 022811 199 GGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEG 248 (291)
Q Consensus 199 ~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 248 (291)
..+|+|++ -..+ ....... ...|+--.+.+.++.+++..+|++++..
T Consensus 79 ~~~~ii~~-~~~~-~~~~~~~-~~~g~~~~l~kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 79 KNVPIVII-GNPD-GFAQHRK-LKAHADEYVAKPVDADQLVERAGALIGF 125 (127)
T ss_dssp TTSCEEEE-ECGG-GHHHHHH-STTCCSEEEESSCCHHHHHHHHHHHHCC
T ss_pred cCCCEEEE-ecCC-chhHHHH-HHhCcchheeCCCCHHHHHHHHHHHHcC
Confidence 57899988 4333 3333333 3457655666688999999999998864
No 85
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=28.91 E-value=1.3e+02 Score=19.86 Aligned_cols=58 Identities=12% Similarity=0.197 Sum_probs=32.3
Q ss_pred CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHH-hcCCCh-HHHHHHHHHHHHhcCC
Q 022811 232 DASREDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAAT-DVGGAS-FNNFNKCIKEVLHYHH 291 (291)
Q Consensus 232 ~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~-~~gg~s-~~~~~~~v~~l~~~~~ 291 (291)
..+.++|.++|+++|.+.+-+... .+++++.+.+.. .-+=++ ...+++.|....+..|
T Consensus 11 ~Psd~ei~~~I~~IL~~aDL~tvT--~K~VR~~Le~~~pg~dLs~kK~~I~~~I~~~L~~~~ 70 (70)
T 1q1v_A 11 PPTDEELKETIKKLLASANLEEVT--MKQICKKVYENYPTYDLTERKDFIKTTVKELISLEH 70 (70)
T ss_dssp CCCHHHHHHHHHHHHTTSCGGGCC--HHHHHHHHHHHCSSSCCSHHHHHHHHHHHHHHHSCC
T ss_pred CcCHHHHHHHHHHHHHhCCHHHHh--HHHHHHHHHHHccCCCChHHHHHHHHHHHHHHhccC
Confidence 568899999999999865432222 133444444432 222222 3446666666655554
No 86
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=28.88 E-value=38 Score=27.79 Aligned_cols=103 Identities=14% Similarity=0.111 Sum_probs=53.5
Q ss_pred hhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcC----CeEEee
Q 022811 93 ECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKD----RGMIAN 168 (291)
Q Consensus 93 ~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~ 168 (291)
++-++|... ....|+.|... -.+....++..+.+-.++=++... .++.+ .+. +..++.
T Consensus 32 ~lg~~LA~~---g~~lV~GGg~~----GlM~aa~~gA~~~GG~~iGv~p~~-------l~~~e----~~~~~~~~~~~~~ 93 (216)
T 1ydh_A 32 ELGNELVKR---KIDLVYGGGSV----GLMGLISRRVYEGGLHVLGIIPKA-------LMPIE----ISGETVGDVRVVA 93 (216)
T ss_dssp HHHHHHHHT---TCEEEECCCSS----HHHHHHHHHHHHTTCCEEEEEEGG-------GHHHH----CCSSCCSEEEEES
T ss_pred HHHHHHHHC---CCEEEECCCcc----cHhHHHHHHHHHcCCcEEEEechh-------cCccc----cccCCCCcccccC
Confidence 344566543 35566665531 234555555555555555444311 01111 111 233444
Q ss_pred ccCccc--ccCCCCcceEEecCCchhHHHHH---------hcCCCeeeccc--ccchhH
Q 022811 169 WCPQDK--VLSHPSVSVFLTHGGWNSILESV---------CGGVPIICWPF--FAEQQT 214 (291)
Q Consensus 169 w~pq~~--iL~h~~v~~fItHgG~~S~~Eal---------~~GvP~i~~P~--~~DQ~~ 214 (291)
.++... +...++. .++--||.||+-|.. .+++|++.+-. +.|...
T Consensus 94 ~~~~Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~ 151 (216)
T 1ydh_A 94 DMHERKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLL 151 (216)
T ss_dssp SHHHHHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHH
T ss_pred CHHHHHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHH
Confidence 444332 3334443 467789999988776 47999999864 444433
No 87
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=28.36 E-value=30 Score=29.05 Aligned_cols=54 Identities=13% Similarity=0.334 Sum_probs=38.2
Q ss_pred CCCcceEEecCCchhHHHHHhc---CCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 178 HPSVSVFLTHGGWNSILESVCG---GVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 178 h~~v~~fItHgG~~S~~Eal~~---GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
.+++ +|+=||=||++++... ++|+++++.. . +|..- .+.++++.++++.+++++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G------------~--~Gfl~--~~~~~~~~~al~~i~~g~ 97 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG------------R--LGFLT--SYTLDEIDRFLEDLRNWN 97 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS------------S--CCSSC--CBCGGGHHHHHHHHHTTC
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC------------C--CCccC--cCCHHHHHHHHHHHHcCC
Confidence 4455 9999999999999866 8898888731 1 12211 345778888888887654
No 88
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=28.06 E-value=2.1e+02 Score=22.23 Aligned_cols=139 Identities=12% Similarity=0.105 Sum_probs=71.2
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcceE
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVF 184 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~f 184 (291)
+.|-|-+||.. +...+++....|+..+.++=..+-+- ...|+.+.+-.. =.....+++|
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HR~p~~~~~~~~-------------~a~~~g~~Vi 62 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSA------HRTPKMMVQFAS-------------EARERGINII 62 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHHHH-------------HTTTTTCCEE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECC------cCCHHHHHHHHH-------------HHHhCCCcEE
Confidence 45667778775 56778888888888888764444321 234444322110 0111223347
Q ss_pred EecCCch----hHHHHHhcCCCeeecccccchh--HHHH-HHHHHhCcceeeCC-CCC---HHHHHHHHHHH--HcCChH
Q 022811 185 LTHGGWN----SILESVCGGVPIICWPFFAEQQ--TNCR-YASTTWGIGMEVNR-DAS---REDIAALVKEI--MEGDKG 251 (291)
Q Consensus 185 ItHgG~~----S~~Eal~~GvP~i~~P~~~DQ~--~na~-~v~~~~G~G~~l~~-~~~---~~~l~~ai~~v--l~~~~~ 251 (291)
|.=.|.. ++.-++ .-+|+|.+|...... ..+- .+.+ +--|+-+.. .++ ...-.-...++ ++|+
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~GvPVatV~I~~a~~~nAa~lAa~Il~~~d~-- 138 (163)
T 3ors_A 63 IAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQ-MPGGIPVATTAIGAAGAKNAGILAARMLSIQNP-- 138 (163)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCCEECCSTHHHHHHHHHHHHHHHHTTCT--
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCceEEEEcCCcccHHHHHHHHHHHhCCCH--
Confidence 7776644 333333 457999999854321 2221 1212 333331111 122 22211112233 3577
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 022811 252 KLIRQNVQDWRKKAEAAT 269 (291)
Q Consensus 252 ~~~r~~a~~l~~~~~~a~ 269 (291)
.++++.+..++..++.+
T Consensus 139 -~l~~kl~~~r~~~~~~v 155 (163)
T 3ors_A 139 -SLVEKLNQYESSLIQKV 155 (163)
T ss_dssp -HHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 78888888887776654
No 89
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=27.44 E-value=1.3e+02 Score=20.80 Aligned_cols=47 Identities=15% Similarity=0.212 Sum_probs=33.1
Q ss_pred cCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHc
Q 022811 199 GGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIME 247 (291)
Q Consensus 199 ~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~ 247 (291)
..+|+|++--..+...-.+ . ...|+--.+.+.++.+++..+|++++.
T Consensus 75 ~~~pii~~s~~~~~~~~~~-~-~~~Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 75 KRIPVIVLTAKGGEEDESL-A-LSLGARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp TTSCEEEEESCCSHHHHHH-H-HHTTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEEecCCchHHHHH-H-HhcChhhhccCCCCHHHHHHHHHHHhc
Confidence 4678887765554443333 3 345877777778999999999998875
No 90
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=27.10 E-value=2.2e+02 Score=22.17 Aligned_cols=142 Identities=15% Similarity=0.114 Sum_probs=74.3
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcceE
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSVF 184 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~f 184 (291)
+.|-|-+||.. +...+++....|+..+..+=..+-+- ...|+.+.+-. . -+....+++|
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HRtp~~l~~~~----------~---~~~~~g~~Vi 64 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSA------HRTPDKMFDYA----------E---TAKERGLKVI 64 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHHHHH----------H---HTTTTTCCEE
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcC------cCCHHHHHHHH----------H---HHHhCCCcEE
Confidence 45677778875 56778888888888887654443321 23444432211 0 0111223448
Q ss_pred EecCCchhHHHHHh---cCCCeeecccccch--hHHHH-HHHHHh--CcceeeCCCCCH-HHHHHHH--HHHH--cCChH
Q 022811 185 LTHGGWNSILESVC---GGVPIICWPFFAEQ--QTNCR-YASTTW--GIGMEVNRDASR-EDIAALV--KEIM--EGDKG 251 (291)
Q Consensus 185 ItHgG~~S~~Eal~---~GvP~i~~P~~~DQ--~~na~-~v~~~~--G~G~~l~~~~~~-~~l~~ai--~~vl--~~~~~ 251 (291)
|.=.|...-+-++. .-+|+|.+|..... ...+- .+ -.. |+++..- .++. .....++ .+++ .|+
T Consensus 65 Ia~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~-vqmp~gvpVatV-~I~~ag~~nAa~lAa~Il~~~d~-- 140 (166)
T 3oow_A 65 IAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSI-VQMPAGIPVATF-AIGMAGAKNAALFAASILQHTDI-- 140 (166)
T ss_dssp EEEECSSCCHHHHHHHTCSSCEEEEECCCTTTTTHHHHHHH-HTCCTTSCCEEC-CSTHHHHHHHHHHHHHHHGGGCH--
T ss_pred EEECCcchhhHHHHHhccCCCEEEeecCcCCCCCHHHHHHH-hcCCCCCceEEE-ecCCccchHHHHHHHHHHcCCCH--
Confidence 88777544333333 24799999984321 11221 11 122 3333321 2221 1111111 2343 467
Q ss_pred HHHHHHHHHHHHHHHHHHhcC
Q 022811 252 KLIRQNVQDWRKKAEAATDVG 272 (291)
Q Consensus 252 ~~~r~~a~~l~~~~~~a~~~g 272 (291)
.++++.+..++..++.+.+.
T Consensus 141 -~l~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 141 -NIAKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp -HHHHHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHHHHHHHHHHHHHhc
Confidence 89999988888887766544
No 91
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=27.08 E-value=31 Score=33.56 Aligned_cols=109 Identities=11% Similarity=0.080 Sum_probs=68.5
Q ss_pred eccCcccccCCCCcceEEecCCchhHHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeC----C--CCCHHHHHHH
Q 022811 168 NWCPQDKVLSHPSVSVFLTHGGWNSILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVN----R--DASREDIAAL 241 (291)
Q Consensus 168 ~w~pq~~iL~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~----~--~~~~~~l~~a 241 (291)
++.+-.++|..+++ .||=- .+.+.|.+..++|+|....-.|++.+. ..|.=..+. + ..+.++|.++
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~-----~rg~y~d~~~~~pg~~~~~~~eL~~~ 676 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG-----LRGFYMNYMEDLPGPIYTEPYGLAKE 676 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS-----CCSBSSCTTSSSSSCEESSHHHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc-----cCCcccChhHhCCCCeECCHHHHHHH
Confidence 45555668888888 99975 457799999999999988766665421 112211111 1 2478889988
Q ss_pred HHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 022811 242 VKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVL 287 (291)
Q Consensus 242 i~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 287 (291)
|.....+. ..++++.+++.+.+-.. .+|.++.+-++.+++...
T Consensus 677 i~~~~~~~--~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 677 LKNLDKVQ--QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HTTHHHHH--HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred Hhhhhccc--hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 88776421 25777777776666443 345555555555555444
No 92
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=26.83 E-value=1.5e+02 Score=21.39 Aligned_cols=49 Identities=12% Similarity=0.019 Sum_probs=31.6
Q ss_pred hcCCCeeecccccchhHHHHHHHHHhC-cceeeCCCCCHHHHHHHHHHHHcC
Q 022811 198 CGGVPIICWPFFAEQQTNCRYASTTWG-IGMEVNRDASREDIAALVKEIMEG 248 (291)
Q Consensus 198 ~~GvP~i~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~l~~ai~~vl~~ 248 (291)
...+|+|++--..|.......+ ..| +--.+.+.++.++|..+|+.++..
T Consensus 74 ~~~~~ii~~s~~~~~~~~~~~~--~~g~~~~~l~KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 74 SPNSVYLMLTGNQDLTTAMEAV--NEGQVFRFLNKPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp CSSCEEEEEECGGGHHHHHHHH--HHTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEECCCCHHHHHHHH--HcCCeeEEEcCCCCHHHHHHHHHHHHHH
Confidence 3466777765444444333333 346 544566678999999999999863
No 93
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=26.79 E-value=1.1e+02 Score=26.22 Aligned_cols=35 Identities=14% Similarity=0.159 Sum_probs=25.6
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEc
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVR 141 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~ 141 (291)
.++++++|+.+. ...+..++++|.+.|+++.+...
T Consensus 6 ~il~~~~~~~Gh--v~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 6 HILFANVQGHGH--VYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEEeCCCCcc--cccHHHHHHHHHhCCCEEEEEcC
Confidence 477888876543 23456788889888999888764
No 94
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=26.61 E-value=1.7e+02 Score=24.86 Aligned_cols=26 Identities=15% Similarity=0.216 Sum_probs=22.3
Q ss_pred eEEecCCchhHHHHHh------cCCCeeeccc
Q 022811 183 VFLTHGGWNSILESVC------GGVPIICWPF 208 (291)
Q Consensus 183 ~fItHgG~~S~~Eal~------~GvP~i~~P~ 208 (291)
.+|.-||-||+.|.+. .++|+-++|.
T Consensus 66 ~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 66 LIIVFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp EEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEEEEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 4999999999999863 5689999997
No 95
>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} SCOP: c.1.10.8 PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A*
Probab=26.38 E-value=2.3e+02 Score=25.82 Aligned_cols=48 Identities=17% Similarity=0.425 Sum_probs=32.4
Q ss_pred hHhhhccC-CCCceEEEE-cCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCC
Q 022811 94 CLKWLNEK-EPNSVAYVN-YGSITVMTDEQMKEFAWGLANSGHPFLWIVRPD 143 (291)
Q Consensus 94 ~~~wl~~~-~~~~vvyvs-~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~ 143 (291)
+.+-|+.. .+..+.+|+ ||... -.+.+..++++.++.|.+++|+..+-
T Consensus 319 L~~~LnP~~epGRlTLI~RmGa~k--v~~~LP~li~aV~~~G~~VvW~cDPM 368 (462)
T 3rzi_A 319 YVERLDPHNKPGRLTLVSRMGNHK--VRDLLPPIVEKVQATGHQVIWQCDPM 368 (462)
T ss_dssp HHHHHCTTCCTTSEEEEECCCTTT--HHHHHHHHHHHHHHTSCCCEEEECCS
T ss_pred HHHHhCCCCCCCeEEEEEccCCch--hhhhHHHHHHHHHHCCCCeEEEeCCC
Confidence 34455533 344566665 55542 24678889999999999999999753
No 96
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=26.15 E-value=2.9e+02 Score=23.65 Aligned_cols=105 Identities=10% Similarity=0.132 Sum_probs=51.8
Q ss_pred hhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccc
Q 022811 97 WLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANS-GHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKV 175 (291)
Q Consensus 97 wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~i 175 (291)
|+...++=.|-.|..|.++..-...+..+...+... +.+++.+...+. ...+.+.++.+-. .-|-...++
T Consensus 19 ~~~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~------~~a~~~a~~~g~~---~~y~d~~el 89 (393)
T 4fb5_A 19 YFQSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANA------GLAEARAGEFGFE---KATADWRAL 89 (393)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--------TTHHHHHHHHTCS---EEESCHHHH
T ss_pred cccCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCH------HHHHHHHHHhCCC---eecCCHHHH
Confidence 454444445778888876531111222233333332 456666665331 1123333333221 123345678
Q ss_pred cCCCCcceEEecCC----chhHHHHHhcCCCeee-ccccc
Q 022811 176 LSHPSVSVFLTHGG----WNSILESVCGGVPIIC-WPFFA 210 (291)
Q Consensus 176 L~h~~v~~fItHgG----~~S~~Eal~~GvP~i~-~P~~~ 210 (291)
|..+++.+++---- .--+.+|+.+|++++| -|+..
T Consensus 90 l~~~~iDaV~IatP~~~H~~~a~~al~aGkhVl~EKPla~ 129 (393)
T 4fb5_A 90 IADPEVDVVSVTTPNQFHAEMAIAALEAGKHVWCEKPMAP 129 (393)
T ss_dssp HHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCS
T ss_pred hcCCCCcEEEECCChHHHHHHHHHHHhcCCeEEEccCCcc
Confidence 88887776653221 2346778888988888 68754
No 97
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=25.68 E-value=83 Score=26.17 Aligned_cols=40 Identities=10% Similarity=0.251 Sum_probs=30.7
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHh--CCCCEEEEEcC
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLAN--SGHPFLWIVRP 142 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~--~~~~~lw~~~~ 142 (291)
++.+|++++||......+.+..+.+.+++ .+..+-|.+..
T Consensus 9 ~~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~~ 50 (269)
T 2xvy_A 9 KTGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTA 50 (269)
T ss_dssp CEEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEESC
T ss_pred CceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehhh
Confidence 35799999999876566688888888875 35788888764
No 98
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=25.65 E-value=3.8e+02 Score=24.28 Aligned_cols=85 Identities=16% Similarity=0.180 Sum_probs=48.4
Q ss_pred CCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCc-
Q 022811 103 PNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSV- 181 (291)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v- 181 (291)
..+.|-|-+||.. +...+++.+..|...|.++=..+-+- ...|+...+-. .+. .....
T Consensus 264 ~~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~sa------HR~p~~~~~~~----------~~~---~~~g~~ 322 (425)
T 2h31_A 264 SQCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSA------HKGPDETLRIK----------AEY---EGDGIP 322 (425)
T ss_dssp CCCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHHHH----------HHH---HTTCCC
T ss_pred CCCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeec------cCCHHHHHHHH----------HHH---HHCCCC
Confidence 3467778888876 56778888888888888764444321 23444332111 000 00112
Q ss_pred ceEEecCCch----hHHHHHhcCCCeeecccc
Q 022811 182 SVFLTHGGWN----SILESVCGGVPIICWPFF 209 (291)
Q Consensus 182 ~~fItHgG~~----S~~Eal~~GvP~i~~P~~ 209 (291)
.+||.=+|.. ++..++ .-+|+|.+|..
T Consensus 323 ~viIa~AG~~a~Lpgvva~~-t~~PVIgvP~~ 353 (425)
T 2h31_A 323 TVFVAVAGRSNGLGPVMSGN-TAYPVISCPPL 353 (425)
T ss_dssp EEEEEECCSSCCHHHHHHHH-CSSCEEECCCC
T ss_pred eEEEEEcCcccchHhHHhcc-CCCCEEEeeCc
Confidence 1277766643 444444 36799999984
No 99
>2ofk_A 3-methyladenine DNA glycosylase I, constitutive; DNA repair, base excision, helix-hairpin-helix, hydrolase; HET: PGE; 1.50A {Salmonella typhi} PDB: 2ofi_A* 1lmz_A 1nku_A 1p7m_A*
Probab=25.07 E-value=56 Score=26.11 Aligned_cols=75 Identities=11% Similarity=0.037 Sum_probs=48.4
Q ss_pred ecccccchhHHHHHHHHHhCcceeeC----C---------CCCHHHH----HHHHHHHHcCCh-------HHHHHHHHHH
Q 022811 205 CWPFFAEQQTNCRYASTTWGIGMEVN----R---------DASREDI----AALVKEIMEGDK-------GKLIRQNVQD 260 (291)
Q Consensus 205 ~~P~~~DQ~~na~~v~~~~G~G~~l~----~---------~~~~~~l----~~ai~~vl~~~~-------~~~~r~~a~~ 260 (291)
+.|...||...-..+-+..-+|+... + .++.+.+ .+-|.++|.|+. -++...||+.
T Consensus 22 G~P~~Dd~~LFE~L~Le~fQAGLSW~tIL~KRe~fr~AF~~Fd~~~VA~~~e~~ve~Ll~d~~IIRnr~KI~A~i~NA~~ 101 (183)
T 2ofk_A 22 GVPETDSRKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPIRIAAMQEEDVERLLQNTGIIRHRGKIQAIISNARA 101 (183)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTTSCHHHHHHTHHHHHHHTGGGCHHHHHTCCHHHHHHHTTCTTSCCCHHHHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHHHhccCCHHHHHHhHHHHHHHHcCCCHHHHcCCCHHHHHHHhcCCcchhhHHHHHHHHHHHHH
Confidence 45778999998665557778887652 1 3555555 345778888762 1456667766
Q ss_pred HHHHHHHHHhcCCChHHHHHHHH
Q 022811 261 WRKKAEAATDVGGASFNNFNKCI 283 (291)
Q Consensus 261 l~~~~~~a~~~gg~s~~~~~~~v 283 (291)
+.+.. ++.||-.+.+..|+
T Consensus 102 ~l~i~----~e~Gsf~~ylW~fv 120 (183)
T 2ofk_A 102 WLAME----QNGESFADFVWSFV 120 (183)
T ss_dssp HHHHH----HTTCCHHHHHHHTT
T ss_pred HHHHH----HhcCCHHHHHhhcC
Confidence 65554 34677666666664
No 100
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=25.03 E-value=40 Score=28.62 Aligned_cols=28 Identities=14% Similarity=0.140 Sum_probs=23.1
Q ss_pred CCcceEEecCCchhHHHHHh----cCCCeeeccc
Q 022811 179 PSVSVFLTHGGWNSILESVC----GGVPIICWPF 208 (291)
Q Consensus 179 ~~v~~fItHgG~~S~~Eal~----~GvP~i~~P~ 208 (291)
+++ +|+=||=||+.+++. .++|++++|.
T Consensus 64 ~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 64 ADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp CSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred CCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 455 999999999999973 3789999973
No 101
>2jg6_A DNA-3-methyladenine glycosidase; 3-methyladenine-DNA-glycosylase-I, hydrolase; 1.70A {Staphylococcus aureus} PDB: 4aia_A* 4ai5_A* 4ai4_A
Probab=24.98 E-value=1.5e+02 Score=23.67 Aligned_cols=75 Identities=16% Similarity=0.097 Sum_probs=48.8
Q ss_pred ecccccchhHHHHHHHHHhCcceeeCC-------------CCCHHHH----HHHHHHHHcCCh-------HHHHHHHHHH
Q 022811 205 CWPFFAEQQTNCRYASTTWGIGMEVNR-------------DASREDI----AALVKEIMEGDK-------GKLIRQNVQD 260 (291)
Q Consensus 205 ~~P~~~DQ~~na~~v~~~~G~G~~l~~-------------~~~~~~l----~~ai~~vl~~~~-------~~~~r~~a~~ 260 (291)
+.|...||...-..+-|..-+|+.... .++.+.+ .+-|.++|.|+. -++...||+.
T Consensus 22 G~Pv~Dd~~LFE~L~LEgfQAGLSW~tIL~KRe~fR~AF~~FD~~~VA~~~e~dve~Ll~d~gIIRnr~KI~A~i~NA~~ 101 (186)
T 2jg6_A 22 GQPLYDSKALFKLLALESQHAGLSWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQG 101 (186)
T ss_dssp TSCCCCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHTGGGCHHHHTTCCHHHHHHHTTCTTSCCCHHHHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHHHhccCCHHHHHHhHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCccchhhHHHHHHHHHHHHH
Confidence 457889999987666577888886530 3555555 345778888762 1456677777
Q ss_pred HHHHHHHHHhcCCChHHHHHHHH
Q 022811 261 WRKKAEAATDVGGASFNNFNKCI 283 (291)
Q Consensus 261 l~~~~~~a~~~gg~s~~~~~~~v 283 (291)
+.+..++ +||-.+.+..|+
T Consensus 102 ~l~i~~e----~gsf~~ylW~fv 120 (186)
T 2jg6_A 102 YLKIEQA----YGSFSKFLWSYV 120 (186)
T ss_dssp HHHHHHH----HSCHHHHHHGGG
T ss_pred HHHHHHh----cCCHHHHHHhcC
Confidence 6666544 566666666555
No 102
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=24.85 E-value=3.4e+02 Score=23.61 Aligned_cols=35 Identities=23% Similarity=0.167 Sum_probs=26.0
Q ss_pred eEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcC
Q 022811 106 VAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRP 142 (291)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~ 142 (291)
|+++++||.+. ..-+..++.+|.+.|+.+.+....
T Consensus 3 Ili~~~gt~Gh--v~p~~~La~~L~~~Gh~V~v~~~~ 37 (404)
T 3h4t_A 3 VLITGCGSRGD--TEPLVALAARLRELGADARMCLPP 37 (404)
T ss_dssp EEEEEESSHHH--HHHHHHHHHHHHHTTCCEEEEECG
T ss_pred EEEEeCCCCcc--HHHHHHHHHHHHHCCCeEEEEeCH
Confidence 67888888652 234566889999999999888753
No 103
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=24.07 E-value=2e+02 Score=24.45 Aligned_cols=123 Identities=11% Similarity=0.071 Sum_probs=61.9
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcce
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLANS-GHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSV 183 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~ 183 (291)
.+.+|..|.++ ..++.++.+. +..++.++..+. .-...+.++. ++. +-.-.++|..+++.+
T Consensus 5 ~vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~~------~~~~~~~~~~--~~~---~~~~~~~l~~~~~D~ 66 (331)
T 4hkt_A 5 RFGLLGAGRIG-------KVHAKAVSGNADARLVAVADAFP------AAAEAIAGAY--GCE---VRTIDAIEAAADIDA 66 (331)
T ss_dssp EEEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSSH------HHHHHHHHHT--TCE---ECCHHHHHHCTTCCE
T ss_pred EEEEECCCHHH-------HHHHHHHhhCCCcEEEEEECCCH------HHHHHHHHHh--CCC---cCCHHHHhcCCCCCE
Confidence 35667777654 2344555554 556665554320 1112222222 222 444556777666655
Q ss_pred EEecCC----chhHHHHHhcCCCeee-ccccc--chhHHHHHHHHHhCcceeeCC--CCCHHHHHHHHHHHHc
Q 022811 184 FLTHGG----WNSILESVCGGVPIIC-WPFFA--EQQTNCRYASTTWGIGMEVNR--DASREDIAALVKEIME 247 (291)
Q Consensus 184 fItHgG----~~S~~Eal~~GvP~i~-~P~~~--DQ~~na~~v~~~~G~G~~l~~--~~~~~~l~~ai~~vl~ 247 (291)
++---. ..-+.+++.+|+++++ -|+.. ++-.-...++++.|+-+.+.- .+.+ ....+++++.
T Consensus 67 V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p--~~~~~~~~i~ 137 (331)
T 4hkt_A 67 VVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDP--HFMAVRKAID 137 (331)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCH--HHHHHHHHHH
T ss_pred EEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCH--HHHHHHHHHH
Confidence 654332 3346778999999888 57654 333332333355566555542 3333 2344455554
No 104
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=23.39 E-value=1.7e+02 Score=20.12 Aligned_cols=53 Identities=8% Similarity=0.201 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHcCChH----HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcCC
Q 022811 235 REDIAALVKEIMEGDKG----KLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHYHH 291 (291)
Q Consensus 235 ~~~l~~ai~~vl~~~~~----~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~~~ 291 (291)
-+++..|+.++-.+++. .+|+....++.-. |.+ .-+..+.++++...+.++||
T Consensus 27 ~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl~eysl~-rNa---qSttiKa~KDi~~sI~~~~~ 83 (85)
T 2ca5_A 27 QGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLY-RNA---QSNTVKVIKDVDAAILEHHH 83 (85)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH-HHH---HHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH-HHH---HHHHHHHHHHHHHHHHHhcc
Confidence 36677777777665532 4677777777554 333 33567788888888887665
No 105
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=23.18 E-value=2.8e+02 Score=23.95 Aligned_cols=107 Identities=11% Similarity=0.056 Sum_probs=55.0
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcce
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLANS-GHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSV 183 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~ 183 (291)
.+..|..|.++. ..+.++... +..++.++..+. +. ...... .++ ..|-...++|..+++.+
T Consensus 7 ~vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~-----~~--~~~a~~--~g~--~~~~~~~~ll~~~~~D~ 68 (359)
T 3e18_A 7 QLVIVGYGGMGS-------YHVTLASAADNLEVHGVFDILA-----EK--REAAAQ--KGL--KIYESYEAVLADEKVDA 68 (359)
T ss_dssp EEEEECCSHHHH-------HHHHHHHTSTTEEEEEEECSSH-----HH--HHHHHT--TTC--CBCSCHHHHHHCTTCCE
T ss_pred cEEEECcCHHHH-------HHHHHHHhCCCcEEEEEEcCCH-----HH--HHHHHh--cCC--ceeCCHHHHhcCCCCCE
Confidence 467777776652 233455554 456555554320 00 011111 122 22334456787666666
Q ss_pred EEecCCch----hHHHHHhcCCCeee-cccccc--hhHHHHHHHHHhCcceee
Q 022811 184 FLTHGGWN----SILESVCGGVPIIC-WPFFAE--QQTNCRYASTTWGIGMEV 229 (291)
Q Consensus 184 fItHgG~~----S~~Eal~~GvP~i~-~P~~~D--Q~~na~~v~~~~G~G~~l 229 (291)
++--.... -+.+++.+|++++| -|+..+ +-.-...++++.|+-+.+
T Consensus 69 V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v 121 (359)
T 3e18_A 69 VLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMV 121 (359)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEE
Confidence 66443333 36778999999988 677543 333333333555554444
No 106
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=22.91 E-value=1.4e+02 Score=25.75 Aligned_cols=124 Identities=13% Similarity=0.084 Sum_probs=62.6
Q ss_pred ceEEEEcCCcccCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCccccccHHHHHHhcCCeEEeeccCcccccCCCCcce
Q 022811 105 SVAYVNYGSITVMTDEQMKEFAWGLANS-GHPFLWIVRPDMVTGDSAILSQEFYEEIKDRGMIANWCPQDKVLSHPSVSV 183 (291)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~w~pq~~iL~h~~v~~ 183 (291)
.+..|..|.++ ...+.++.+. +..++.++..+. .-...+.++.. + ..+-...++|..+++.+
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~~------~~~~~~~~~~g--~--~~~~~~~~~l~~~~~D~ 69 (354)
T 3db2_A 7 GVAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRTE------DKREKFGKRYN--C--AGDATMEALLAREDVEM 69 (354)
T ss_dssp EEEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSSH------HHHHHHHHHHT--C--CCCSSHHHHHHCSSCCE
T ss_pred eEEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCCH------HHHHHHHHHcC--C--CCcCCHHHHhcCCCCCE
Confidence 46777777654 2355666665 566666655330 11122222221 1 11334456775555555
Q ss_pred EEecCC----chhHHHHHhcCCCeee-ccccc--chhHHHHHHHHHhCcceeeCC--CCCHHHHHHHHHHHHc
Q 022811 184 FLTHGG----WNSILESVCGGVPIIC-WPFFA--EQQTNCRYASTTWGIGMEVNR--DASREDIAALVKEIME 247 (291)
Q Consensus 184 fItHgG----~~S~~Eal~~GvP~i~-~P~~~--DQ~~na~~v~~~~G~G~~l~~--~~~~~~l~~ai~~vl~ 247 (291)
++--.. ...+.+++.+|+++++ -|+.. ++-.-...++++.|+-+.+.- .+.+ ....+++++.
T Consensus 70 V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p--~~~~~k~~i~ 140 (354)
T 3db2_A 70 VIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLG--ALRKMKEMID 140 (354)
T ss_dssp EEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSH--HHHHHHHHHH
T ss_pred EEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCH--HHHHHHHHHh
Confidence 553222 3346778999999887 57654 333333333355565554432 3333 2344555554
No 107
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=22.70 E-value=86 Score=24.30 Aligned_cols=27 Identities=30% Similarity=0.277 Sum_probs=20.6
Q ss_pred eEEEEcCCcccCCHHHHHHHHHHHHhC
Q 022811 106 VAYVNYGSITVMTDEQMKEFAWGLANS 132 (291)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~~l~~~ 132 (291)
+.|+++||....+...++..+..|.+.
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcC
Confidence 679999999755566777777777764
No 108
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=22.54 E-value=1.7e+02 Score=27.45 Aligned_cols=27 Identities=19% Similarity=0.484 Sum_probs=22.7
Q ss_pred cceEEecCC------chhHHHHHhcCCCeeecc
Q 022811 181 VSVFLTHGG------WNSILESVCGGVPIICWP 207 (291)
Q Consensus 181 v~~fItHgG------~~S~~Eal~~GvP~i~~P 207 (291)
.+++++|.| .+.+.+|.+.++|+|++-
T Consensus 69 ~~v~~~tsGpG~~N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 69 LGVTVGSGGPGASHLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp CCEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEeCcChHHHHHHHHHHHHHhcCCCEEEEc
Confidence 445899998 668899999999999984
No 109
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=22.06 E-value=3.2e+02 Score=22.17 Aligned_cols=150 Identities=14% Similarity=0.046 Sum_probs=67.6
Q ss_pred hhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccHHHHHHh-cCCeEEeeccCcccc
Q 022811 97 WLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQEFYEEI-KDRGMIANWCPQDKV 175 (291)
Q Consensus 97 wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~w~pq~~i 175 (291)
|++-. .++++.|..|.++ ...+..|.+.|..+.++-. . ..+.+.... ..++.+..-.-+...
T Consensus 26 fl~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap-~--------~~~~l~~l~~~~~i~~i~~~~~~~d 88 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAP-T--------VSAEINEWEAKGQLRVKRKKVGEED 88 (223)
T ss_dssp EECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECS-S--------CCHHHHHHHHTTSCEEECSCCCGGG
T ss_pred EEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECC-C--------CCHHHHHHHHcCCcEEEECCCCHhH
Confidence 45443 4668877766553 4455667777888776543 1 112222211 133443322222345
Q ss_pred cCCCCcceEEecCCchhHHHHHhcCCCeeeccc-ccchhHHHHHH----HHHhCcceeeCC-CCC---HHHHHHHHHHHH
Q 022811 176 LSHPSVSVFLTHGGWNSILESVCGGVPIICWPF-FAEQQTNCRYA----STTWGIGMEVNR-DAS---REDIAALVKEIM 246 (291)
Q Consensus 176 L~h~~v~~fItHgG~~S~~Eal~~GvP~i~~P~-~~DQ~~na~~v----~~~~G~G~~l~~-~~~---~~~l~~ai~~vl 246 (291)
|..+++ +|.--|.-.+.+.++.-.- ..+|+ ..|.+..+..+ .+.-++-+.+.. ..+ +..|++.|.+.+
T Consensus 89 L~~adL--VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~~l 165 (223)
T 3dfz_A 89 LLNVFF--IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSSNY 165 (223)
T ss_dssp SSSCSE--EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHS
T ss_pred hCCCCE--EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHHHc
Confidence 666666 7776666555555443222 23332 23444333211 011122222222 111 344555555555
Q ss_pred cCChHHHHHHHHHHHHHHHHH
Q 022811 247 EGDKGKLIRQNVQDWRKKAEA 267 (291)
Q Consensus 247 ~~~~~~~~r~~a~~l~~~~~~ 267 (291)
. ++...+-+.+.+++..+++
T Consensus 166 p-~~~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 166 D-ESYTQYTQFLYECRVLIHR 185 (223)
T ss_dssp C-THHHHHHHHHHHHHHHHHH
T ss_pred c-HHHHHHHHHHHHHHHHHHH
Confidence 3 3233566666666666655
No 110
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=21.92 E-value=38 Score=24.90 Aligned_cols=49 Identities=14% Similarity=0.128 Sum_probs=30.7
Q ss_pred cCCCeeecccccchhHHHHHHHHHhC-cceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 199 GGVPIICWPFFAEQQTNCRYASTTWG-IGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 199 ~GvP~i~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
..+|+|++--..+...-...+ ..| +--.+.+.++.++|..+|+.++...
T Consensus 78 ~~~~ii~ls~~~~~~~~~~~~--~~g~~~~~l~kP~~~~~L~~~i~~~~~~~ 127 (154)
T 2rjn_A 78 PDIERVVISGYADAQATIDAV--NRGKISRFLLKPWEDEDVFKVVEKGLQLA 127 (154)
T ss_dssp TTSEEEEEECGGGHHHHHHHH--HTTCCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCCHHHHHHHH--hccchheeeeCCCCHHHHHHHHHHHHHHH
Confidence 467877765444433222222 235 5445666789999999999988533
No 111
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=21.53 E-value=1.4e+02 Score=23.71 Aligned_cols=100 Identities=17% Similarity=0.136 Sum_probs=54.8
Q ss_pred hhHhhhccCCCCceEEEEcCCcccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccccccH-HHHHHhcCCeEEeeccC
Q 022811 93 ECLKWLNEKEPNSVAYVNYGSITVMTDEQMKEFAWGLANSGHPFLWIVRPDMVTGDSAILSQ-EFYEEIKDRGMIANWCP 171 (291)
Q Consensus 93 ~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~~l~~~~~~~lw~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~w~p 171 (291)
++-++|... .+..|+.|... -.+....++..+.+-.++=++... +.+ +.....-.+..++...+
T Consensus 24 ~lg~~La~~---g~~lV~GGg~~----GiM~aa~~gA~~~gG~~iGv~p~~--------l~~~e~~~~~~~~~~~~~~~~ 88 (191)
T 1t35_A 24 ELGVYMAEQ---GIGLVYGGSRV----GLMGTIADAIMENGGTAIGVMPSG--------LFSGEVVHQNLTELIEVNGMH 88 (191)
T ss_dssp HHHHHHHHT---TCEEEECCCCS----HHHHHHHHHHHTTTCCEEEEEETT--------CCHHHHTTCCCSEEEEESHHH
T ss_pred HHHHHHHHC---CCEEEECCCcc----cHHHHHHHHHHHcCCeEEEEeCch--------hcccccccCCCCccccCCCHH
Confidence 455566653 46777776541 245566666666666666655422 111 00000012233445555
Q ss_pred ccc-c-cCCCCcceEEecCCchhHHHH---H------hcCCCeeeccc
Q 022811 172 QDK-V-LSHPSVSVFLTHGGWNSILES---V------CGGVPIICWPF 208 (291)
Q Consensus 172 q~~-i-L~h~~v~~fItHgG~~S~~Ea---l------~~GvP~i~~P~ 208 (291)
... + ...++ ..++--||.||+-|. + .+++|++.+-.
T Consensus 89 ~Rk~~~~~~sd-a~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 89 ERKAKMSELAD-GFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp HHHHHHHHHCS-EEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred HHHHHHHHHCC-EEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 433 3 33444 457788999998765 4 37899999864
No 112
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=21.45 E-value=2e+02 Score=20.28 Aligned_cols=49 Identities=12% Similarity=0.111 Sum_probs=33.8
Q ss_pred cCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 199 GGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 199 ~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
..+|+|++--..+...-.+.+ ..|+--.+.+.++.++|..+|++++...
T Consensus 77 ~~~pii~~t~~~~~~~~~~~~--~~ga~~~l~KP~~~~~L~~~i~~~l~~~ 125 (136)
T 3t6k_A 77 KTLPILMLTAQGDISAKIAGF--EAGANDYLAKPFEPQELVYRVKNILART 125 (136)
T ss_dssp TTCCEEEEECTTCHHHHHHHH--HHTCSEEEETTCCHHHHHHHHHHHHHC-
T ss_pred CCccEEEEecCCCHHHHHHHH--hcCcceEEeCCCCHHHHHHHHHHHHhcc
Confidence 367888776555544333333 4577667777899999999999998654
No 113
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=20.87 E-value=1.4e+02 Score=21.50 Aligned_cols=65 Identities=9% Similarity=0.038 Sum_probs=42.5
Q ss_pred cCCCCcceEEecCCchh---------HHHHHhcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHH
Q 022811 176 LSHPSVSVFLTHGGWNS---------ILESVCGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIM 246 (291)
Q Consensus 176 L~h~~v~~fItHgG~~S---------~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl 246 (291)
+..+++ +|--+|..| +-.|...|+|+|++=.++.+.. -..+ +..+..+ + ..+.+.|.++|+..+
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~~-P~~l-~~~a~~i-V--~Wn~~~I~~aI~~~~ 108 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENV-PPEL-EAVSSEV-V--GWNPHCIRDALEDAL 108 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSCC-CTTH-HHHCSEE-E--CSCHHHHHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCcC-CHHH-HhhCcee-c--cCCHHHHHHHHHhcc
Confidence 344565 888889887 5678889999999766554421 1113 2222222 2 478999999998876
Q ss_pred c
Q 022811 247 E 247 (291)
Q Consensus 247 ~ 247 (291)
.
T Consensus 109 ~ 109 (111)
T 1eiw_A 109 D 109 (111)
T ss_dssp C
T ss_pred C
Confidence 4
No 114
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=20.57 E-value=1e+02 Score=23.90 Aligned_cols=27 Identities=30% Similarity=0.277 Sum_probs=21.6
Q ss_pred eEEEEcCCcccCCHHHHHHHHHHHHhC
Q 022811 106 VAYVNYGSITVMTDEQMKEFAWGLANS 132 (291)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~~l~~~ 132 (291)
.+|+++||....+...++..+..|.+.
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcC
Confidence 589999999765667788888888765
No 115
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=20.55 E-value=3e+02 Score=23.28 Aligned_cols=76 Identities=11% Similarity=0.116 Sum_probs=41.3
Q ss_pred cCcccccCCCCcceEEecCCc----hhHHHHHhcCCCeee-cccccc--hhHHHHHHHHHhCcceeeCC--CCCHHHHHH
Q 022811 170 CPQDKVLSHPSVSVFLTHGGW----NSILESVCGGVPIIC-WPFFAE--QQTNCRYASTTWGIGMEVNR--DASREDIAA 240 (291)
Q Consensus 170 ~pq~~iL~h~~v~~fItHgG~----~S~~Eal~~GvP~i~-~P~~~D--Q~~na~~v~~~~G~G~~l~~--~~~~~~l~~ 240 (291)
-...++|..+++.+++--.-. -.+.+++.+|++++| -|+..+ +..-...++++.|+-+.+.- .+.+ ...
T Consensus 57 ~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p--~~~ 134 (329)
T 3evn_A 57 DKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIP--MTQ 134 (329)
T ss_dssp SCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSSCSSH--HHH
T ss_pred CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcccCCH--HHH
Confidence 344567876666656543332 346788999999887 687543 33333333355555444332 3443 234
Q ss_pred HHHHHHc
Q 022811 241 LVKEIME 247 (291)
Q Consensus 241 ai~~vl~ 247 (291)
.+++++.
T Consensus 135 ~~~~~i~ 141 (329)
T 3evn_A 135 VIKKLLA 141 (329)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 4555554
No 116
>3kxe_C Antitoxin protein PARD-1; complex, TA system, protein binding; 2.60A {Caulobacter crescentus NA1000}
Probab=20.53 E-value=70 Score=22.18 Aligned_cols=49 Identities=18% Similarity=0.129 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 022811 235 REDIAALVKEIMEGDKGKLIRQNVQDWRKKAEAATDVGGASFNNFNKCIKEVLHY 289 (291)
Q Consensus 235 ~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 289 (291)
.+-|..+|+.+... ......++..+..+.+.|-+..-+.++++..++.+
T Consensus 31 SEviR~~lR~l~~r------e~~l~~Lr~~l~~G~~Sg~~~~~d~d~v~a~~~~~ 79 (88)
T 3kxe_C 31 SEVIRAGLRLLEEN------EAKLAALRAALIEGEESGFIEDFDFDAFIEERSRA 79 (88)
T ss_dssp HHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHTCEESSCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH------hHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Confidence 46677777665432 23455677777777666654435788999888764
No 117
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=20.38 E-value=1.4e+02 Score=23.17 Aligned_cols=28 Identities=25% Similarity=0.207 Sum_probs=23.1
Q ss_pred eEEEEcCCcccCCHHHHHHHHHHHHhCC
Q 022811 106 VAYVNYGSITVMTDEQMKEFAWGLANSG 133 (291)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~~l~~~~ 133 (291)
.+|+++||....+...++..+..|.+.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 4899999998777888888888888753
No 118
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=20.32 E-value=1.5e+02 Score=20.82 Aligned_cols=50 Identities=6% Similarity=0.032 Sum_probs=35.1
Q ss_pred hcCCCeeecccccchhHHHHHHHHHhCcceeeCCCCCHHHHHHHHHHHHcCC
Q 022811 198 CGGVPIICWPFFAEQQTNCRYASTTWGIGMEVNRDASREDIAALVKEIMEGD 249 (291)
Q Consensus 198 ~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 249 (291)
...+|+|++--..+...-...+ ..|+--.+.+.++.++|.++|++++...
T Consensus 79 ~~~~~ii~ls~~~~~~~~~~~~--~~g~~~~l~KP~~~~~l~~~i~~~~~~~ 128 (140)
T 3lua_A 79 TANTPVIIATKSDNPGYRHAAL--KFKVSDYILKPYPTKRLENSVRSVLKIC 128 (140)
T ss_dssp GTTCCEEEEESCCCHHHHHHHH--HSCCSEEEESSCCTTHHHHHHHHHHCC-
T ss_pred cCCCCEEEEeCCCCHHHHHHHH--HcCCCEEEECCCCHHHHHHHHHHHHHhc
Confidence 4578888876555544433333 4577666777789999999999999765
Done!