BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022812
(291 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O74507|YJD4_SCHPO Uncharacterized protein C594.04c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC594.04c PE=3 SV=2
Length = 344
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 97/227 (42%), Gaps = 40/227 (17%)
Query: 62 RQVVLTFLAVVWGLRLAL-FLLMRILNWG-EDRRFDEMRSNLGK-----LAIFWI--FQA 112
R +++ FL +W RL + N G ED R+ +R + K F+I FQ
Sbjct: 108 RLMIMAFLQTLWSARLTYNYYRKGGYNRGAEDYRWVRVRQIMPKWIYPLFHYFYIHIFQV 167
Query: 113 VWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENR--- 169
+ ++ ++ P + + + + A D I ++ +E +ADQQ+ + + +
Sbjct: 168 LHLYLLASPTYIAMLAGNERAFGAWDWIALELFMFMFVLEMLADQQQWDYYEARNHYNVD 227
Query: 170 --------------GKWCNV-GFWKYSRHPNYFGEIFLWWGIF----VASTPVLDGAEWL 210
G+ N G +++SRHPN+ E +W + +AS +L+ W
Sbjct: 228 KTVPPRFKYDLLSLGRGFNATGLFRWSRHPNFLAEQLIWLSFYLFGAIASESLLN---WT 284
Query: 211 VILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIP 257
+ +L L+ +F L E+ + +K+ P YR+Y+ P
Sbjct: 285 IF---AWLGLVGVFQGSTRLTEKMSCEKY---PLYRVYQDKVGRFFP 325
>sp|P24008|S5A1_RAT 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Rattus norvegicus
GN=Srd5a1 PE=1 SV=2
Length = 259
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 141 GWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVAS 200
G+ +W VG+ I +D + + E K G ++Y NYFGE+ W G +AS
Sbjct: 154 GFALWLVGMVINIHSDHILRNLRKPGETGYKIPRGGLFEYVSAANYFGELVEWCGFALAS 213
>sp|Q68FF9|S5A1_MOUSE 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Mus musculus GN=Srd5a1
PE=2 SV=2
Length = 255
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 139 VIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFV 198
+ G+ +W VG+ I +D + + E K G ++Y NYFGE+ W G +
Sbjct: 148 LTGFALWLVGMVINIHSDHILRNLRKPGETGYKIPRGGLFEYVSSANYFGELVEWCGFAL 207
Query: 199 AS 200
AS
Sbjct: 208 AS 209
>sp|Q9LDR4|ERG24_ARATH Delta(14)-sterol reductase OS=Arabidopsis thaliana GN=FK PE=1 SV=2
Length = 369
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 10/64 (15%)
Query: 139 VIGWIMWSVGVSIEAIADQQKLSFKNSPEN----------RGKWCNVGFWKYSRHPNYFG 188
V+ +++ +G + A++QK FK +P+ GK G+W +RH NY G
Sbjct: 245 VVNCLVFLIGYMVFRGANKQKHIFKKNPKTPIWGKPPVVVGGKLLVSGYWGIARHCNYLG 304
Query: 189 EIFL 192
++ L
Sbjct: 305 DLML 308
>sp|P18405|S5A1_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Homo sapiens GN=SRD5A1
PE=1 SV=1
Length = 259
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 104 LAIFWIFQAVWVWTVSLPVTVVNASD--RDPSVQAVDVIGWIMWSVGVSIEAIADQQKLS 161
+AI + ++ + L V A D DP +IG+ +W G+ I +D +
Sbjct: 119 MAIMFCTCNGYLQSRYLSHCAVYADDWVTDPRF----LIGFGLWLTGMLINIHSDHILRN 174
Query: 162 FKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVAS 200
+ + K G ++Y NYFGEI W G +AS
Sbjct: 175 LRKPGDTGYKIPRGGLFEYVTAANYFGEIMEWCGYALAS 213
>sp|Q9UT20|YFY8_SCHPO Uncharacterized protein C9.08c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC9.08c PE=3 SV=1
Length = 282
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 143 IMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTP 202
I++ + S D L S + + G ++Y PNYF E W+G ++A+ P
Sbjct: 177 ILYDLRRSSNKKKDPDNLDTVQSENSYYRIPYGGLFQYVSCPNYFCEWIEWFGCYLAAGP 236
Query: 203 VLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYR 246
+ W FL+ +LL + + KKF PA R
Sbjct: 237 SAEPFWWF------FLSEILLMLPRALKAHQWYCKKFPKYPANR 274
>sp|Q28891|S5A1_MACFA 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Macaca fascicularis
GN=SRD5A1 PE=1 SV=1
Length = 263
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 139 VIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFV 198
+IG+ +W G+ I +D + + + K G ++Y NYFGEI W G +
Sbjct: 156 LIGFGLWLAGMLINIHSDHILRNLRKPGDTGYKIPRGGLFEYVTAANYFGEIMEWCGYAL 215
Query: 199 AS 200
AS
Sbjct: 216 AS 217
>sp|A5PJS2|S5A1_BOVIN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Bos taurus GN=SRD5A1
PE=2 SV=1
Length = 257
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 139 VIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFV 198
+ G +W +G+ I +D + + E K G ++Y NYFGE+ W G +
Sbjct: 150 LTGSALWLIGMLINIHSDHVLRNLRKPGETGYKIPRGGLFEYISAANYFGEVVEWCGYAL 209
Query: 199 AS 200
AS
Sbjct: 210 AS 211
>sp|B3MRT7|NFU1_DROAN NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila ananassae GN=GF20932 PE=3 SV=1
Length = 286
Score = 31.6 bits (70), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 205 DGAEWLVILGPIFLTLLLLFISGIPLLEES 234
+GAEW +I +F ++ F SG+P+L ES
Sbjct: 134 EGAEWSLIKPEVFAVIMDFFASGLPILHES 163
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.143 0.478
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,004,366
Number of Sequences: 539616
Number of extensions: 4577318
Number of successful extensions: 11159
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 11142
Number of HSP's gapped (non-prelim): 31
length of query: 291
length of database: 191,569,459
effective HSP length: 116
effective length of query: 175
effective length of database: 128,974,003
effective search space: 22570450525
effective search space used: 22570450525
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)