Query 022813
Match_columns 291
No_of_seqs 114 out of 520
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 11:33:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022813.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022813hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sng_A Nuclease; mainly alpha 100.0 8.3E-77 2.9E-81 538.0 18.6 266 19-286 1-269 (277)
2 1ak0_A P1 nuclease; endonuclea 100.0 1.4E-70 4.9E-75 496.7 15.4 258 19-287 1-269 (270)
3 1ah7_A Phospholipase C; phosph 100.0 1.4E-43 4.9E-48 315.7 7.6 217 20-287 10-244 (245)
4 2wxu_A Phospholipase C; cytoly 96.4 0.012 4.2E-07 54.2 9.4 219 21-285 8-243 (370)
5 1olp_A Alpha-toxin; zinc phosp 95.8 0.01 3.5E-07 54.8 5.5 220 21-285 8-243 (370)
6 3lay_A Zinc resistance-associa 20.9 42 0.0014 27.3 1.9 37 12-49 44-82 (175)
7 1y71_A Kinase-associated prote 10.8 55 0.0019 25.2 0.0 9 142-150 49-57 (130)
8 1qmy_A Protease, leader protea 10.2 2.2E+02 0.0076 22.4 3.3 79 101-181 21-115 (167)
9 2qsb_A UPF0147 protein TA0600; 8.7 4.4E+02 0.015 18.8 4.1 45 101-150 29-74 (89)
10 3vgp_A Transmembrane oligosacc 8.5 67 0.0023 25.8 -0.3 14 15-28 34-47 (164)
No 1
>3sng_A Nuclease; mainly alpha helical, trinuclear metal centre, 3'-nucleotidase, nucleic acids, mononucleotid cytosol membrane associated; HET: NAG BMA MAN BTB; 2.16A {Solanum lycopersicum} PDB: 4dj4_A*
Probab=100.00 E-value=8.3e-77 Score=538.04 Aligned_cols=266 Identities=53% Similarity=1.032 Sum_probs=238.9
Q ss_pred CChhHHHHHHHHHhccCCHHHHHHHHHhCCCCCCCChhcccccccccc--ccCCCCccccccCCCCCCCCccccCCCCCc
Q 022813 19 WGKEGHFAICKIAEGYLTEDALAAVKELLPDSAEGDLANVCSWADEVR--FHMRWSSPLHYVDTPDFMCNYKYCRDCHDS 96 (291)
Q Consensus 19 W~~~GH~~Va~IA~~~L~~~~~~~l~~lL~~~~~~~l~~~a~WaD~ir--~~~~~~~~wHy~d~p~~~~~~~~~~dc~~~ 96 (291)
||..|||+||+||+++|+|+++++|+++|+.....+|+++|+|||+|| ..++|+++|||+|+|++.|++++.|||++.
T Consensus 1 Wg~~GH~~Va~IA~~~L~~~~~~~v~~lL~~~~~~~l~~~a~WaD~ir~~~~~~~~~~wHyid~p~~~c~~~~~rdc~~~ 80 (277)
T 3sng_A 1 WSKEGHVMTCRIAQGLLNDEAAHAVKMLLPEYVNGDLSALCVWPDQVRHWYKYKWTSPLHFIDTPDKACNFDYERDCHDQ 80 (277)
T ss_dssp CCHHHHHHHHHHHHTTCCHHHHHHHHHHSCGGGTTCGGGTTTHHHHHTTSGGGGGGGGGGCCCBCTTTCCCCHHHHCBCT
T ss_pred CCcHHHHHHHHHHHHHCCHHHHHHHHHHhCcccccCHHHHhhhHhhhcccccccccCcceeecCCCCcCCCcccCCcccc
Confidence 999999999999999999999999999998654579999999999999 568999999999999999999999999765
Q ss_pred CCCCCCcHHHHHHHHHHHHccCCCCchhhhhhhHHHHHHHHHHHHhhcCCCCccCCCCCCCCCeEEEecCCCcCCchHHH
Q 022813 97 VGRKNRCVTGAIYNYTMQLKSGYQDSISVEKYNLTEALMFLSHFIGDVHQPLHVGFIGDKGGNTITVRWYRRKTNLHHVW 176 (291)
Q Consensus 97 ~~~~~~~v~~aI~~~~~~L~~~~~~~~~~~~~~~~~aL~~LiHlvGDiHQPLH~~~~~D~GGN~~~v~~~g~~~nLH~~W 176 (291)
.+++++||++||.+++++|++.+.++. .+.+++.+|||||||||||||||||+++.+|+|||+|+|.|+|+++|||+||
T Consensus 81 ~~~~~~cvv~aI~~~t~~L~~~~~~~~-~~~~~~~~aLkfLvHfvGDiHQPLH~g~~~D~GGN~i~V~~~g~~~NLH~vW 159 (277)
T 3sng_A 81 HGVKDMCVAGAIQNFTTQLSHYREGTS-DRRYNMTEALLFLSHFMGDIHQPMHVGFTSDAGGNSIDLRWFRHKSNLHHVW 159 (277)
T ss_dssp TCCBTCSHHHHHHHHHHHHTTTTTCCC-CTTCCHHHHHHHHHHHHHHHHSGGGGCBTTTTTTTTCEEEETTEEEEHHHHH
T ss_pred cCCCcchHHHHHHHHHHHHcCCCCccc-CChHHHHHHHHHHHHHhccccCCccCCCCcCCCCCeEEEEECCccCchHHHH
Confidence 567799999999999999998862000 0468899999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhHhhhcCCchHHHHHHHHHHhhcc-CccchhhhhhhccCCCCCChhhhHHHHHHHHHHHcccCCCCCCCCCHHH
Q 022813 177 DTMIIDSALKTYYDSDIAVMIQSIQRNITD-GWSNDVSSWENCANNQTVCPNGYASESVSLACKFAYRNATPGTTLEDDY 255 (291)
Q Consensus 177 Ds~l~~~~~~~~~~~~~~~~~~~l~~~i~~-~~~~~~~~~~~~~~~~~~~~~~Wa~ES~~~a~~~vY~~~~~~~~ls~~Y 255 (291)
|++|++...+.++..+..++++.|.++++. .|+++.++|..|.+ ...||.+|+.||+++||++||+...++.+|+++|
T Consensus 160 Ds~ii~~~~~~~~~~~~~~~a~~L~~~i~~~~~~~~~~~w~~~~~-~~~~~~~Wa~ES~~la~~~vY~~~~~~~~L~~~Y 238 (277)
T 3sng_A 160 DREIILTAAKDYYAKDINLLEEDIEGNFTDGIWSDDLASWRECGN-VFSCVNKFATESINIACKWGYKGVEAGETLSDDY 238 (277)
T ss_dssp HTHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTHHHHHCCCS-HHHHHHHHHHHHHHHHHHTTSTTCCTTCEECHHH
T ss_pred HhhhhhhhhccccccCHHHHHHHHHHHhhcccchhHHHHHhhccc-ccCCHHHHHHHHHHHHHHHhccCCCCCCccCHHH
Confidence 999999877766666778899999888875 48888889987643 5579999999999999999999888888999999
Q ss_pred HhchHHHHHHHHHHHHHHHHHHHHHHhcchh
Q 022813 256 FLTRLPIVEKRLAQSGIRLAATLNRIFSSQI 286 (291)
Q Consensus 256 ~~~~~~~~~~ql~~AG~RLA~~Ln~i~~~~~ 286 (291)
++++.|++|+||++||||||.+||.||+++.
T Consensus 239 ~~~~~~i~e~qla~aG~RLA~~LN~i~~~~~ 269 (277)
T 3sng_A 239 FNSRLPIVMKRVAQGGIRLAMLLNNVFGASQ 269 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 9999999999999999999999999998754
No 2
>1ak0_A P1 nuclease; endonuclease, reaction mechanism, thiophosphory oligonucleotides, glycosylated protein; HET: NAG ADS THS; 1.80A {Penicillium citrinum} SCOP: a.124.1.2
Probab=100.00 E-value=1.4e-70 Score=496.68 Aligned_cols=258 Identities=32% Similarity=0.552 Sum_probs=223.9
Q ss_pred CChhHHHHHHHHHhccCCHHHHHHHHHhCCCCCCCChhccccccccccc--cCCCCccccccCCCC---CCCCccccCCC
Q 022813 19 WGKEGHFAICKIAEGYLTEDALAAVKELLPDSAEGDLANVCSWADEVRF--HMRWSSPLHYVDTPD---FMCNYKYCRDC 93 (291)
Q Consensus 19 W~~~GH~~Va~IA~~~L~~~~~~~l~~lL~~~~~~~l~~~a~WaD~ir~--~~~~~~~wHy~d~p~---~~~~~~~~~dc 93 (291)
||.+|||+||+||+++|+|+++++|+++|+++...+|+++|+|||+||. .++|+++|||+|+|. ..|++++.|||
T Consensus 1 Wg~~GH~~va~iA~~~L~~~~~~~v~~lL~~~~~~~l~~~a~WaD~ir~~~~~~~~~~wHyid~~~~p~~~c~~~~~rdc 80 (270)
T 1ak0_A 1 WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLHFIDAEDNPPTNCNVDYERDC 80 (270)
T ss_dssp CCHHHHHHHHHHHHHHSCHHHHHHHHHHHTCCSTTTTGGGTTHHHHHHTSTTTGGGGGGGCCCCCCBTTTBCCCCHHHHS
T ss_pred CCcHHHHHHHHHHHHHCCHHHHHHHHHHhCCCCcccHHHHccchhhcccCCCCCccccccCCCCcCCCCcCCCCcccCCC
Confidence 9999999999999999999999999999998755679999999999994 479999999999975 44889899999
Q ss_pred CCcCCCCCCcHHHHHHHHHHHHccCCCCchhhhhhhHHHHHHHHHHHHhhcCCCCccCCCCCCCCCeEEEecCCCcCCch
Q 022813 94 HDSVGRKNRCVTGAIYNYTMQLKSGYQDSISVEKYNLTEALMFLSHFIGDVHQPLHVGFIGDKGGNTITVRWYRRKTNLH 173 (291)
Q Consensus 94 ~~~~~~~~~~v~~aI~~~~~~L~~~~~~~~~~~~~~~~~aL~~LiHlvGDiHQPLH~~~~~D~GGN~~~v~~~g~~~nLH 173 (291)
+ +++||++||.+++++|++.++ +.+++.++||||+|||||||||||++ .+|+|||+|+|+++|+++|||
T Consensus 81 ~-----~~~cv~~ai~~~~~~L~~~~~-----s~~~~~~aL~fLvH~vGDiHQPLH~~-~~D~GGN~i~V~~~g~~~nLH 149 (270)
T 1ak0_A 81 G-----SSGCSISAIANYTQRVSDSSL-----SSENHAEALRFLVHFIGDMTQPLHDE-AYAVGGNKINVTFDGYHDNLH 149 (270)
T ss_dssp C-----TTCCHHHHHHHHHHHHTCTTS-----CHHHHHHHHHHHHHHHHHTTSGGGGC-CHHHHTTTCEEEETTEEEEHH
T ss_pred C-----CcccHHHHHHHHHHHHccCCC-----CHHHHHHHHHHHHHHcccccCcccCc-CcCCCCCeEEEEECCccCccH
Confidence 4 479999999999999999776 46889999999999999999999998 689999999999999999999
Q ss_pred HHHhhhhHhhHhhhcCCchHHHHHHHHHHhhcc-CccchhhhhhhccC--CCCCChhhhHHHHHHHHHHHcccCC---CC
Q 022813 174 HVWDTMIIDSALKTYYDSDIAVMIQSIQRNITD-GWSNDVSSWENCAN--NQTVCPNGYASESVSLACKFAYRNA---TP 247 (291)
Q Consensus 174 ~~WDs~l~~~~~~~~~~~~~~~~~~~l~~~i~~-~~~~~~~~~~~~~~--~~~~~~~~Wa~ES~~~a~~~vY~~~---~~ 247 (291)
+|||++++++..+.++..+...+++.+.+++.. .|+++.+.|.+|.. ....||.+|+.||+++||+.||+.. .+
T Consensus 150 ~vWDs~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~wa~ES~~la~~~vY~~~~~~~~ 229 (270)
T 1ak0_A 150 SDWDTYMPQKLIGGHALSDAESWAKTLVQNIESGNYTAQAIGWIKGDNISEPITTATRWASDANALVCTVVMPHGAAALQ 229 (270)
T ss_dssp HHHHTHHHHHHHSCCSHHHHHHHHHHHHHHHHHSTTHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHTTSTTCSGGGS
T ss_pred HHHhccchhhhccccCcchHHHHHHHHHHhcccCCCchhHHHhhcCccccccccCHHHHHHHHHHHHHHHhcccCccccc
Confidence 999999998876665555666777777777654 37788888987643 2346899999999999999999853 34
Q ss_pred CCCCCHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcchhh
Q 022813 248 GTTLEDDYFLTRLPIVEKRLAQSGIRLAATLNRIFSSQIK 287 (291)
Q Consensus 248 ~~~ls~~Y~~~~~~~~~~ql~~AG~RLA~~Ln~i~~~~~~ 287 (291)
+.+|+++|+.+++|++|+||++||+|||.+||.||++..+
T Consensus 230 ~~~l~~~Y~~~~~~v~e~qla~aG~RLA~~Ln~i~~~~~~ 269 (270)
T 1ak0_A 230 TGDLYPTYYDSVIDTIELQIAKGGYRLANWINEIHGSEIA 269 (270)
T ss_dssp SSBCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 6789999999999999999999999999999999987643
No 3
>1ah7_A Phospholipase C; phospholipid hydrolysis, hydrolase; 1.50A {Bacillus cereus} SCOP: a.124.1.1 PDB: 2ffz_A 1p5x_A 1p6d_A* 1p6e_A* 2fgn_A 2huc_A
Probab=100.00 E-value=1.4e-43 Score=315.72 Aligned_cols=217 Identities=18% Similarity=0.189 Sum_probs=164.0
Q ss_pred ChhHHHHHHHHHhccCCHHHHHHHH---HhCCCCCCCChhcccccccccccc-C-CCCccccccCCCCCCCCccccCCCC
Q 022813 20 GKEGHFAICKIAEGYLTEDALAAVK---ELLPDSAEGDLANVCSWADEVRFH-M-RWSSPLHYVDTPDFMCNYKYCRDCH 94 (291)
Q Consensus 20 ~~~GH~~Va~IA~~~L~~~~~~~l~---~lL~~~~~~~l~~~a~WaD~ir~~-~-~~~~~wHy~d~p~~~~~~~~~~dc~ 94 (291)
|..||+.|+++|...|+......++ ..+..+ ...+...|+|||+ |.. + +|+++|||+|+|.+ |++.+.++|.
T Consensus 10 ~~~tH~~I~~~A~~~L~~~~~~~~~~~~~~~~~w-~D~i~~~~~w~D~-k~~~~~~~~~~~Hy~d~~~~-~~~~~~~~~~ 86 (245)
T 1ah7_A 10 GVNSHLWIVNRAIDIMSRNTTLVKQDRVAQLNEW-RTELENGIYAADY-ENPYYDNSTFASHFYDPDNG-KTYIPFAKQA 86 (245)
T ss_dssp GGCHHHHHHHHHHHHHHHCCSSCCHHHHHHHHHT-HHHHHHHHHHTTT-STTTTTTTTCGGGCCBTTTT-BCSSTTCCCH
T ss_pred CCcHHHHHHHHHHHHhccccchHHHHHHHHHHhC-HHHHHhcCcCCCc-ccccccccCCCcccccCCCC-CCCCCCCCCc
Confidence 6789999999999999766421111 122222 1357777888888 732 3 89999999999864 8888888884
Q ss_pred CcCCCCCCcHHHHHHHHHHHHccCCCCchhhhhhhHHHHHHHHHHHHhhcCCCCccCCCCCCCCCeEEEecCCCcCCchH
Q 022813 95 DSVGRKNRCVTGAIYNYTMQLKSGYQDSISVEKYNLTEALMFLSHFIGDVHQPLHVGFIGDKGGNTITVRWYRRKTNLHH 174 (291)
Q Consensus 95 ~~~~~~~~~v~~aI~~~~~~L~~~~~~~~~~~~~~~~~aL~~LiHlvGDiHQPLH~~~~~D~GGN~~~v~~~g~~~nLH~ 174 (291)
. .|++.+|.++++.+++.+ ..++.++|+||+||||||||||| |||.+. +|+.+|||+
T Consensus 87 ~------~~~~~~~~~~~~~l~~~~-------~~~~~~aL~~l~H~vGDiHQPlH-------~gn~~~---~~~~~nlH~ 143 (245)
T 1ah7_A 87 K------ETGAKYFKLAGESYKNKD-------MKQAFFYLGLSLHYLGDVNQPMH-------AANFTN---LSYPQGFHS 143 (245)
T ss_dssp H------HHHHHHHHHHHHHHHTTC-------HHHHHHHHHHHHHHHHHHTSTTT-------TTTCCT---TSSSTTHHH
T ss_pred c------hHHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHhcCCCCC-------CCcccc---CCCCCCchH
Confidence 2 399999999999998864 37799999999999999999999 677776 578899999
Q ss_pred HHhhhhHhhHhhhcCCchHHHHHHHHHHhhccCccchhhhhhhccCCCCCChhhhHHHHHHHHHHHcccCCCCCCCCCHH
Q 022813 175 VWDTMIIDSALKTYYDSDIAVMIQSIQRNITDGWSNDVSSWENCANNQTVCPNGYASESVSLACKFAYRNATPGTTLEDD 254 (291)
Q Consensus 175 ~WDs~l~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~Wa~ES~~~a~~~vY~~~~~~~~ls~~ 254 (291)
+|| .+++.....+ .. .. ..+...|. ..||.+|+.||+++ |+.+|+....+.. +++
T Consensus 144 ~WD-~~i~~~~~~y-~~------------~~---~~~~~~~~------~~~~~~W~~Es~~~-a~~~Y~~~~~~~~-~~~ 198 (245)
T 1ah7_A 144 KYE-NFVDTIKDNY-KV------------TD---GNGYWNWK------GTNPEEWIHGAAVV-AKQDYSGIVNDNT-KDW 198 (245)
T ss_dssp HHH-HHHHHHGGGG-CC------------CS---SCCCTTCS------CSCHHHHHHHHHHH-HHHTGGGTSSHHH-HHH
T ss_pred HHH-HHHHHHhhcc-cc------------cc---hHHHHHHh------cCCHHHHHHHHHHH-HHHHhccccCCCc-ccc
Confidence 999 7776532222 11 00 11222332 24899999999999 6779987654444 556
Q ss_pred HHh---------c----hHHHHHHHHHHHHHHHHHHHHHHhcchhh
Q 022813 255 YFL---------T----RLPIVEKRLAQSGIRLAATLNRIFSSQIK 287 (291)
Q Consensus 255 Y~~---------~----~~~~~~~ql~~AG~RLA~~Ln~i~~~~~~ 287 (291)
|+. + +++++++||++||+|||.+||.+|++.++
T Consensus 199 Y~~~~~~~~~~~~~~~~~~~v~~~qL~~aG~RLA~~Ln~i~~~~~~ 244 (245)
T 1ah7_A 199 FVKAAVSQEYADKWRAEVTPMTGKRLMDAQRVTAGYIQLWFDTYGD 244 (245)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred hhhhccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 763 5 89999999999999999999999987653
No 4
>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A
Probab=96.44 E-value=0.012 Score=54.24 Aligned_cols=219 Identities=17% Similarity=0.134 Sum_probs=104.6
Q ss_pred hhHHHHHHHHHhccCCHH-------HHHHHHHhCCCCCCCChhccccccccccccCCCCccccccCCCCCCCCccccCCC
Q 022813 21 KEGHFAICKIAEGYLTED-------ALAAVKELLPDSAEGDLANVCSWADEVRFHMRWSSPLHYVDTPDFMCNYKYCRDC 93 (291)
Q Consensus 21 ~~GH~~Va~IA~~~L~~~-------~~~~l~~lL~~~~~~~l~~~a~WaD~ir~~~~~~~~wHy~d~p~~~~~~~~~~dc 93 (291)
..-|+.|+.=|...|... ..+...++|... ...|-+=+.|||.=...+. ...-||.|... ..++-....=
T Consensus 8 ~~TH~~I~~qAl~iL~nd~~~~~~~~~k~~~~~L~~y-~~~l~~Gs~~pD~d~k~~~-~f~~Hfydp~~-~~~~~~~~~w 84 (370)
T 2wxu_A 8 TGTHAMIVTQGVSILENDLSKNEPESVRKNLEILKEN-MHELQLGSTYPDYDKNAYD-LYQDHFWDPDI-DNNFSKDNSW 84 (370)
T ss_dssp BSHHHHHHHHHHHHHHHHCCTTSCHHHHHHHHHHHHT-HHHHHHHHHGGGTCTTCCT-TCGGGCCCTTC----------C
T ss_pred CchHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHH-HHHHHcCCcccccCCcccc-ccccccccCCC-CCCccccccc
Confidence 456999999888888332 222222333211 1246666889997221111 12239998433 2233110000
Q ss_pred CCcCCCCCCcHHHHHHHHHHH----HccCCCCchhhhhhhHHHHHHHHHHHHhhcCCCCccC-C-CCCCCCCeEEEecCC
Q 022813 94 HDSVGRKNRCVTGAIYNYTMQ----LKSGYQDSISVEKYNLTEALMFLSHFIGDVHQPLHVG-F-IGDKGGNTITVRWYR 167 (291)
Q Consensus 94 ~~~~~~~~~~v~~aI~~~~~~----L~~~~~~~~~~~~~~~~~aL~~LiHlvGDiHQPLH~~-~-~~D~GGN~~~v~~~g 167 (291)
--.-.. ..........+.+. .+... ...-.+.|...+|+|+|+.||+|+. . .-|.+
T Consensus 85 ~~~~~~-~~tA~~~~~ky~~~A~~~~~~g~-------~~~A~~~LG~a~Hy~~D~~~P~Ha~n~t~~~~~---------- 146 (370)
T 2wxu_A 85 YLAYSI-PDTGESQIRKFSALARYEWQRGN-------YKQATFYLGEAMHYFGDIDTPYHPANVTAVDSA---------- 146 (370)
T ss_dssp TTTBCB-CCCHHHHHHHHHHHHHHHHHTTC-------HHHHHHHHHHHHHHHHHHTSSTTTTTCCTTTCT----------
T ss_pred ccccCC-CCcHHHHHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHhhcCCCCcccccccccCCc----------
Confidence 000000 01123333333333 22222 2345689999999999999999995 1 11111
Q ss_pred CcCCchHHHhhhhHhhHhhhcCCchHHHHHHHHHHhhccCccchhhhhhhccCCCCCChhhhHHHHHHH----HHHHccc
Q 022813 168 RKTNLHHVWDTMIIDSALKTYYDSDIAVMIQSIQRNITDGWSNDVSSWENCANNQTVCPNGYASESVSL----ACKFAYR 243 (291)
Q Consensus 168 ~~~nLH~~WDs~l~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~Wa~ES~~~----a~~~vY~ 243 (291)
-|+-.+.-+..... .+ ... +........-+.. .....+|.+|+.|.... |.+.-|+
T Consensus 147 ----gH~~fE~~V~~~~~-~y-~~~------------t~g~~~~~~~y~~--~~~~~~~~~Wv~e~ak~~Ak~a~~~Y~~ 206 (370)
T 2wxu_A 147 ----GHVKFETFAEERKE-QY-KIN------------TAGCKTNEAFYTD--ILKNKDFNAWSKEYARGFAKTGKSIYYS 206 (370)
T ss_dssp ----HHHHHHHHHHHHGG-GG-CCS------------CCSSCTTSHHHHH--HHHCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHhhh-he-eec------------cCCcccccceeec--ccccCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 17777776543321 11 000 0000000000000 00123788999988775 5542333
Q ss_pred CCCCCCCCCHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcch
Q 022813 244 NATPGTTLEDDYFLTRLPIVEKRLAQSGIRLAATLNRIFSSQ 285 (291)
Q Consensus 244 ~~~~~~~ls~~Y~~~~~~~~~~ql~~AG~RLA~~Ln~i~~~~ 285 (291)
... ......+| ..+++.+|..|=..+|..|..+|...
T Consensus 207 ~~~-~~~~~~~~----~~~a~~~L~~AQ~~TAGfl~~f~~~v 243 (370)
T 2wxu_A 207 HAS-MSHSWDDW----DYAAKVTLANSQKGTAGYIYRFLHDV 243 (370)
T ss_dssp TTS-TTSCHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcc-ccCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 322 11223455 56677888888888888887777643
No 5
>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3
Probab=95.81 E-value=0.01 Score=54.80 Aligned_cols=220 Identities=17% Similarity=0.129 Sum_probs=107.4
Q ss_pred hhHHHHHHHHHhccCCHH-------HHHHHHHhCCCCCCCChhccccccccccccCCCCccccccCCCCCCCCccccCCC
Q 022813 21 KEGHFAICKIAEGYLTED-------ALAAVKELLPDSAEGDLANVCSWADEVRFHMRWSSPLHYVDTPDFMCNYKYCRDC 93 (291)
Q Consensus 21 ~~GH~~Va~IA~~~L~~~-------~~~~l~~lL~~~~~~~l~~~a~WaD~ir~~~~~~~~wHy~d~p~~~~~~~~~~dc 93 (291)
..-|..|+.=|...|... ..+.-.++|... ...|-+=+.|||.=...+. ...-||.|. ....++-....=
T Consensus 8 ~~TH~~I~~qAl~iL~nd~~~~~~~~~k~~~~~L~~y-~~~l~~Gs~~pD~d~k~~~-~f~~Hfydp-~~~~~~~~~~~w 84 (370)
T 1olp_A 8 TGTHSVIVTQAIEMLKHDLSKDEPEAIRNDLSILEKN-LHKFQLGSTFPDYDPNAYS-LYQDHFWDP-DTDHNFTQDNKW 84 (370)
T ss_dssp BSHHHHHHHHHHHHHHHHCCTTSCHHHHHHHHHHHHT-HHHHHHHHHGGGGCTTCCT-TCGGGCCBT-TTTBCHHHHSGG
T ss_pred CchHHHHHHHHHHHHhhcCccchhhHHHHHHHHHHHH-HHHHHcCCcccccCCcccc-ccccccccC-CCCCCccccccc
Confidence 456999999998888332 223333333221 1356677899998221111 122399984 322333100000
Q ss_pred CCcCCCCCCcHHHHHHHHHHH----HccCCCCchhhhhhhHHHHHHHHHHHHhhcCCCCccCCCCCCCCCeEEEecCCCc
Q 022813 94 HDSVGRKNRCVTGAIYNYTMQ----LKSGYQDSISVEKYNLTEALMFLSHFIGDVHQPLHVGFIGDKGGNTITVRWYRRK 169 (291)
Q Consensus 94 ~~~~~~~~~~v~~aI~~~~~~----L~~~~~~~~~~~~~~~~~aL~~LiHlvGDiHQPLH~~~~~D~GGN~~~v~~~g~~ 169 (291)
--.-.. ..........+.+. .+... ...-.+.|...+|+|+|+.||+|+.. +....
T Consensus 85 ~~~~~~-~~tA~~~~~ky~~~A~~~~~~g~-------~~~A~~~LG~a~Hy~~D~~~P~Ha~n------------~t~~~ 144 (370)
T 1olp_A 85 YLSYAV-PDNAESQTRKFATLAKNEWDKGN-------YEKAAWYLGQGMHYFGDLNTPYHAAN------------VTAVD 144 (370)
T ss_dssp GGGGCC-SCCHHHHHHHHHHHHHHHHHHTC-------HHHHHHHHHHHHHHHHHHTSHHHHTT------------CCTTT
T ss_pred ccccCC-CCcHHHHHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHhhcCCCCccccc------------ccccC
Confidence 000000 01122223333332 22222 23456899999999999999999941 00000
Q ss_pred CCchHHHhhhhHhhHhhhcCCchHHHHHHHHHHhh-ccCccchhhhhhhccCCCCCChhhhHHHHHHH----HHHHcccC
Q 022813 170 TNLHHVWDTMIIDSALKTYYDSDIAVMIQSIQRNI-TDGWSNDVSSWENCANNQTVCPNGYASESVSL----ACKFAYRN 244 (291)
Q Consensus 170 ~nLH~~WDs~l~~~~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~~~~~~~~~~~~~~~Wa~ES~~~----a~~~vY~~ 244 (291)
+.-|+-.+.-+..... .+ .+ +........-+. ......+|.+|+.|.... |.+.-|+.
T Consensus 145 ~~gH~~yE~~V~~~~~-~y--------------~i~t~g~~~~~~~y~--~~~~~~~~~~Wi~e~a~~~Ak~a~~~Y~~~ 207 (370)
T 1olp_A 145 SPGHVKFETYAEERKD-TY--------------RLDTTGYNTDDAFYK--DTLKNDNFNEWSKGYCKYWAKKAKNLYYSH 207 (370)
T ss_dssp CHHHHHHHHHHHHHGG-GG--------------CCSCCSSCTTSHHHH--GGGSCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHhhh-he--------------eeccCCcccccceee--cccccCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1117766666543321 11 01 000000000000 001134788999988774 44422222
Q ss_pred CCCCCCCCHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcch
Q 022813 245 ATPGTTLEDDYFLTRLPIVEKRLAQSGIRLAATLNRIFSSQ 285 (291)
Q Consensus 245 ~~~~~~ls~~Y~~~~~~~~~~ql~~AG~RLA~~Ln~i~~~~ 285 (291)
.. ......+| ..+++++|..|=..+|..|..+|...
T Consensus 208 ~~-~~~~~~~~----~~~a~~~L~~AQ~~TAGfl~~f~~~v 243 (370)
T 1olp_A 208 AT-MSNSWDDW----EYAASHGVGNAQKGVAGYLYRFLNDV 243 (370)
T ss_dssp CS-TTSCHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-ccCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 11223455 67777889999888998888777643
No 6
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=20.89 E-value=42 Score=27.32 Aligned_cols=37 Identities=11% Similarity=0.093 Sum_probs=13.4
Q ss_pred hhhccccCCh--hHHHHHHHHHhccCCHHHHHHHHHhCCC
Q 022813 12 LVNGVLGWGK--EGHFAICKIAEGYLTEDALAAVKELLPD 49 (291)
Q Consensus 12 ~~~~a~AW~~--~GH~~Va~IA~~~L~~~~~~~l~~lL~~ 49 (291)
.+++|+|.|. .|+- +..=.+..||++.++++++|...
T Consensus 44 ~s~~A~A~g~~~~g~g-m~~q~~LnLT~EQq~ql~~I~~e 82 (175)
T 3lay_A 44 SSGAAFAGHHWGNNDG-MWQQGGSPLTTEQQATAQKIYDD 82 (175)
T ss_dssp -------------------------CCHHHHHHHHHHHHH
T ss_pred HhHHHHhcCCCCCCCC-ccccccccCCHHHHHHHHHHHHH
Confidence 3445676433 2321 11223467999999999999753
No 7
>1y71_A Kinase-associated protein B; structural genomics, midwest CE structural genomics, MCSG, protein structure initiative, PS unknown function; 1.95A {Bacillus cereus} SCOP: b.34.16.1
Probab=10.79 E-value=55 Score=25.21 Aligned_cols=9 Identities=33% Similarity=0.637 Sum_probs=0.0
Q ss_pred hhcCCCCcc
Q 022813 142 GDVHQPLHV 150 (291)
Q Consensus 142 GDiHQPLH~ 150 (291)
||+|.|=-+
T Consensus 49 GDLHnP~q~ 57 (130)
T 1y71_A 49 GDLHNVKQA 57 (130)
T ss_dssp ---------
T ss_pred cCCCCCCcC
Confidence 899999765
No 8
>1qmy_A Protease, leader protease; hydrolase, sulfhydryl proteinase, picornaviral proteinase; 1.9A {Aphthovirus O} SCOP: d.3.1.2 PDB: 1qol_A 2jqf_R 2jqg_R
Probab=10.24 E-value=2.2e+02 Score=22.37 Aligned_cols=79 Identities=18% Similarity=0.249 Sum_probs=48.7
Q ss_pred CCcHHHHHHHHHHHHccCCCCchhhhhhh-HHHHHHHHHHHHh-hcCC-------------CCccCCCCCCC-CCeEEEe
Q 022813 101 NRCVTGAIYNYTMQLKSGYQDSISVEKYN-LTEALMFLSHFIG-DVHQ-------------PLHVGFIGDKG-GNTITVR 164 (291)
Q Consensus 101 ~~~v~~aI~~~~~~L~~~~~~~~~~~~~~-~~~aL~~LiHlvG-DiHQ-------------PLH~~~~~D~G-GN~~~v~ 164 (291)
+.|-+++|.+.++.+-.+.....=.+++. -.+++++|.-+.| |+|- =||++- |-.- -..+ ..
T Consensus 21 dncWLNtilQLfryvdepfFd~~y~spenlt~~~I~ql~e~TGldL~eGgPPalViw~ik~ll~tgv-GTasrPsev-c~ 98 (167)
T 1qmy_A 21 DNAWLNAILQLFRYVEEPFFDWVYSSPENLTLEAIKQLEDLTGLELHEGGPPALVIWNIKHLLHTGI-GTASRPSEV-CV 98 (167)
T ss_dssp SCHHHHHHHHHHHHHTCCTTHHHHTCSSCCHHHHHHHHHHHHCCCCSSCCCHHHHHHHHGGGCSSCE-EESSSCCSE-EE
T ss_pred cchHHHHHHHHHHHcCccchhhccCChhhhhHHHHHHHHHhhcceeccCCCCEEEEEeehhhhccCC-cccCCCcce-EE
Confidence 68999999999998877665210002233 3469999999999 7764 244431 1111 1112 23
Q ss_pred cCCCcCCchHHHhhhhH
Q 022813 165 WYRRKTNLHHVWDTMII 181 (291)
Q Consensus 165 ~~g~~~nLH~~WDs~l~ 181 (291)
+.|..+-|-.+|-+.++
T Consensus 99 ~~g~~mCLaDfhAgIfl 115 (167)
T 1qmy_A 99 VDGTDMSLADFHAGIFL 115 (167)
T ss_dssp CCSCCCCGGGEEEEEEE
T ss_pred EcCCceehhhhhhheee
Confidence 56788888888777644
No 9
>2qsb_A UPF0147 protein TA0600; structural genomics, four-helix bundle, PSI-2, protein structure initiative; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728} SCOP: a.29.14.1
Probab=8.65 E-value=4.4e+02 Score=18.78 Aligned_cols=45 Identities=16% Similarity=0.138 Sum_probs=35.7
Q ss_pred CCcHHHHHHHHHHHHccCCCCchhhhhhh-HHHHHHHHHHHHhhcCCCCcc
Q 022813 101 NRCVTGAIYNYTMQLKSGYQDSISVEKYN-LTEALMFLSHFIGDVHQPLHV 150 (291)
Q Consensus 101 ~~~v~~aI~~~~~~L~~~~~~~~~~~~~~-~~~aL~~LiHlvGDiHQPLH~ 150 (291)
.+++=.|..+....|.+.+.+ ... -+-++..|--..-|--.|+|+
T Consensus 29 PRNIRraA~ea~~~L~~e~~~-----~~vRAA~aIs~LDeISnDPNmP~h~ 74 (89)
T 2qsb_A 29 PKNVRKVAQDSKAKLSQENES-----LDLRCATVLSMLDEMANDPNVPAHG 74 (89)
T ss_dssp CHHHHHHHHHHHHHHTCTTSC-----HHHHHHHHHHHHHHHHTCTTSCHHH
T ss_pred ChHHHHHHHHHHHHHhCCCcc-----hhHHHHHHHHHHHHhhcCCCCChHH
Confidence 467778888888899888763 333 357889999999999999996
No 10
>3vgp_A Transmembrane oligosaccharyl transferase, putativ; glycosyltransferase, cell membrane; 1.75A {Archaeoglobus fulgidus}
Probab=8.53 E-value=67 Score=25.83 Aligned_cols=14 Identities=21% Similarity=0.665 Sum_probs=11.5
Q ss_pred ccccCChhHHHHHH
Q 022813 15 GVLGWGKEGHFAIC 28 (291)
Q Consensus 15 ~a~AW~~~GH~~Va 28 (291)
.+.+||+.||.+.+
T Consensus 34 ~V~sWWDYG~~i~~ 47 (164)
T 3vgp_A 34 SVMSWWDYGNWILY 47 (164)
T ss_dssp SEECCCCHHHHTTT
T ss_pred EEEeeccCchhhee
Confidence 47899999998764
Done!